Clocel_0004	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clocel_0018	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Clocel_0028	SSF109755	PhoU-like
Clocel_0037	SSF46689	Homeodomain-like
Clocel_0037	SSF52172	CheY-like
Clocel_0039	SSF161098	MetI-like
Clocel_0052	SSF111304	Recombination protein RecR
Clocel_0055	SSF46785	"Winged helix" DNA-binding domain
Clocel_0058	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clocel_0063	SSF55486	Metalloproteases ("zincins"), catalytic domain
Clocel_0067	SSF109604	HD-domain/PDEase-like
Clocel_0070	SSF101821	Aminopeptidase/glucanase lid domain
Clocel_0070	SSF53187	Zn-dependent exopeptidases
Clocel_0072	SSF53187	Zn-dependent exopeptidases
Clocel_0087	SSF143422	Transposase IS200-like
Clocel_0089	SSF51730	FAD-linked oxidoreductase
Clocel_0091	SSF53633	Carbamate kinase-like
Clocel_0098	SSF53383	PLP-dependent transferases
Clocel_0098	SSF55904	Ornithine decarboxylase C-terminal domain
Clocel_0103	SSF55008	HMA, heavy metal-associated domain
Clocel_0112	SSF81345	ABC transporter involved in vitamin B12 uptake, BtuC
Clocel_0113	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clocel_0128	SSF63817	Sortase
Clocel_0136	SSF47413	lambda repressor-like DNA-binding domains
Clocel_0141	SSF54001	Cysteine proteinases
Clocel_0141	SSF69318	Integrin alpha N-terminal domain
Clocel_0142	SSF69318	Integrin alpha N-terminal domain
Clocel_0149	SSF54001	Cysteine proteinases
Clocel_0151	SSF56601	beta-lactamase/transpeptidase-like
Clocel_0161	SSF143422	Transposase IS200-like
Clocel_0165	SSF47413	lambda repressor-like DNA-binding domains
Clocel_0180	SSF46785	"Winged helix" DNA-binding domain
Clocel_0184	SSF102114	Radical SAM enzymes
Clocel_0185	SSF48239	Terpenoid cyclases/Protein prenyltransferases
Clocel_0196	SSF50475	FMN-binding split barrel
Clocel_0234	SSF54862	4Fe-4S ferredoxins
Clocel_0246	SSF46894	C-terminal effector domain of the bipartite response regulators
Clocel_0246	SSF52172	CheY-like
Clocel_0265	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Clocel_0272	SSF49373	Invasin/intimin cell-adhesion fragments
Clocel_0276	SSF56112	Protein kinase-like (PK-like)
Clocel_0286	SSF56784	HAD-like
Clocel_0294	SSF53822	Periplasmic binding protein-like I
Clocel_0310	SSF117281	Kelch motif
Clocel_0310	SSF49373	Invasin/intimin cell-adhesion fragments
Clocel_0333	SSF48600	Chorismate mutase II
Clocel_0333	SSF53850	Periplasmic binding protein-like II
Clocel_0333	SSF55021	ACT-like
Clocel_0335	SSF55205	EPT/RTPC-like
Clocel_0340	SSF46785	"Winged helix" DNA-binding domain
Clocel_0341	SSF82549	DAK1/DegV-like
Clocel_0343	SSF51998	PFL-like glycyl radical enzymes
Clocel_0354	SSF47413	lambda repressor-like DNA-binding domains
Clocel_0354	SSF53822	Periplasmic binding protein-like I
Clocel_0356	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clocel_0369	SSF49879	SMAD/FHA domain
Clocel_0372	SSF46600	C-terminal UvrC-binding domain of UvrB
Clocel_0372	SSF47781	RuvA domain 2-like
Clocel_0372	SSF82771	GIY-YIG endonuclease
Clocel_0382	SSF56519	Penicillin binding protein dimerisation domain
Clocel_0382	SSF56601	beta-lactamase/transpeptidase-like
Clocel_0386	SSF89550	PHP domain-like
Clocel_0391	SSF48208	Six-hairpin glycosidases
Clocel_0391	SSF74650	Galactose mutarotase-like
Clocel_0398	SSF46689	Homeodomain-like
Clocel_0401	SSF56112	Protein kinase-like (PK-like)
Clocel_0403	SSF143422	Transposase IS200-like
Clocel_0408	SSF55469	FMN-dependent nitroreductase-like
Clocel_0410	SSF48600	Chorismate mutase II
Clocel_0410	SSF52317	Class I glutamine amidotransferase-like
Clocel_0415	SSF47384	Homodimeric domain of signal transducing histidine kinase
Clocel_0415	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Clocel_0418	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clocel_0428	SSF54001	Cysteine proteinases
Clocel_0432	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clocel_0437	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clocel_0442	SSF52317	Class I glutamine amidotransferase-like
Clocel_0454	SSF51905	FAD/NAD(P)-binding domain
Clocel_0461	SSF53098	Ribonuclease H-like
Clocel_0466	SSF63446	Type I dockerin domain
Clocel_0466	SSF69318	Integrin alpha N-terminal domain
Clocel_0467	SSF47413	lambda repressor-like DNA-binding domains
Clocel_0472	SSF46689	Homeodomain-like
Clocel_0472	SSF48498	Tetracyclin repressor-like, C-terminal domain
Clocel_0479	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
Clocel_0480	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
Clocel_0482	SSF53474	alpha/beta-Hydrolases
Clocel_0500	SSF46785	"Winged helix" DNA-binding domain
Clocel_0500	SSF53850	Periplasmic binding protein-like II
Clocel_0502	SSF159245	AttH-like
Clocel_0517	SSF47413	lambda repressor-like DNA-binding domains
Clocel_0517	SSF53822	Periplasmic binding protein-like I
Clocel_0523	SSF161098	MetI-like
Clocel_0530	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Clocel_0531	SSF103481	Multidrug resistance efflux transporter EmrE
Clocel_0555	SSF89550	PHP domain-like
Clocel_0582	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clocel_0584	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clocel_0589	SSF48208	Six-hairpin glycosidases
Clocel_0594	SSF46785	"Winged helix" DNA-binding domain
Clocel_0594	SSF53067	Actin-like ATPase domain
Clocel_0595	SSF82549	DAK1/DegV-like
Clocel_0596	SSF53098	Ribonuclease H-like
Clocel_0617	SSF55073	Nucleotide cyclase
Clocel_0617	SSF55785	PYP-like sensor domain (PAS domain)
Clocel_0627	SSF160240	Cation efflux protein cytoplasmic domain-like
Clocel_0627	SSF161111	Cation efflux protein transmembrane domain-like
Clocel_0635	SSF50621	Alanine racemase C-terminal domain-like
Clocel_0635	SSF51419	PLP-binding barrel
Clocel_0640	SSF49265	Fibronectin type III
Clocel_0640	SSF50998	Quinoprotein alcohol dehydrogenase-like
Clocel_0642	SSF51735	NAD(P)-binding Rossmann-fold domains
Clocel_0642	SSF52283	Formate/glycerate dehydrogenase catalytic domain-like
Clocel_0643	SSF50447	Translation proteins
Clocel_0643	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clocel_0643	SSF54211	Ribosomal protein S5 domain 2-like
Clocel_0643	SSF54980	EF-G C-terminal domain-like
Clocel_0652	SSF46785	"Winged helix" DNA-binding domain
Clocel_0652	SSF47979	Iron-dependent repressor protein, dimerization domain
Clocel_0666	SSF50447	Translation proteins
Clocel_0666	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clocel_0666	SSF54980	EF-G C-terminal domain-like
Clocel_0670	SSF52374	Nucleotidylyl transferase
Clocel_0670	SSF55174	Alpha-L RNA-binding motif
Clocel_0673	SSF56300	Metallo-dependent phosphatases
Clocel_0689	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clocel_0689	SSF55186	ThrRS/AlaRS common domain
Clocel_0700	SSF54862	4Fe-4S ferredoxins
Clocel_0704	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Clocel_0710	SSF82549	DAK1/DegV-like
Clocel_0712	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clocel_0716	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Clocel_0718	SSF100950	NagB/RpiA/CoA transferase-like
Clocel_0718	SSF46785	"Winged helix" DNA-binding domain
Clocel_0723	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
Clocel_0724	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
Clocel_0726	SSF47336	ACP-like
Clocel_0726	SSF51735	NAD(P)-binding Rossmann-fold domains
Clocel_0726	SSF52777	CoA-dependent acyltransferases
Clocel_0726	SSF56801	Acetyl-CoA synthetase-like
Clocel_0732	SSF50249	Nucleic acid-binding proteins
Clocel_0740	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clocel_0740	SSF90123	ABC transporter transmembrane region
Clocel_0742	SSF111369	HlyD-like secretion proteins
Clocel_0762	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clocel_0764	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clocel_0765	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
Clocel_0771	SSF54060	His-Me finger endonucleases
Clocel_0773	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Clocel_0776	SSF110857	Gamma-glutamyl cyclotransferase-like
Clocel_0792	SSF57997	Tropomyosin
Clocel_0802	SSF53041	Resolvase-like
Clocel_0821	SSF52113	BRCT domain
Clocel_0821	SSF53098	Ribonuclease H-like
Clocel_0835	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clocel_0839	SSF56747	Prim-pol domain
Clocel_0840	SSF140652	YozE-like
Clocel_0847	SSF53041	Resolvase-like
Clocel_0851	SSF56300	Metallo-dependent phosphatases
Clocel_0854	SSF52172	CheY-like
Clocel_0855	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Clocel_0864	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clocel_0864	SSF90123	ABC transporter transmembrane region
Clocel_0866	SSF55144	LigT-like
Clocel_0879	SSF56784	HAD-like
Clocel_0887	SSF53901	Thiolase-like
Clocel_0890	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clocel_0895	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
Clocel_0916	SSF46689	Homeodomain-like
Clocel_0916	SSF51182	RmlC-like cupins
Clocel_0918	SSF46894	C-terminal effector domain of the bipartite response regulators
Clocel_0918	SSF52172	CheY-like
Clocel_0925	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Clocel_0933	SSF143422	Transposase IS200-like
Clocel_0972	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clocel_0972	SSF90123	ABC transporter transmembrane region
Clocel_0973	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clocel_0973	SSF90123	ABC transporter transmembrane region
Clocel_0981	SSF49373	Invasin/intimin cell-adhesion fragments
Clocel_0981	SSF49785	Galactose-binding domain-like
Clocel_0984	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Clocel_0985	SSF53098	Ribonuclease H-like
Clocel_0999	SSF51126	Pectin lyase-like
Clocel_0999	SSF63446	Type I dockerin domain
Clocel_1005	SSF81296	E set domains
Clocel_1007	SSF47413	lambda repressor-like DNA-binding domains
Clocel_1010	SSF63446	Type I dockerin domain
Clocel_1010	SSF69318	Integrin alpha N-terminal domain
Clocel_1014	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Clocel_1016	SSF50151	SacY-like RNA-binding domain
Clocel_1016	SSF63520	PTS-regulatory domain, PRD
Clocel_1017	SSF51261	Duplicated hybrid motif
Clocel_1017	SSF55604	Glucose permease domain IIB
Clocel_1025	SSF56784	HAD-like
Clocel_1029	SSF46785	"Winged helix" DNA-binding domain
Clocel_1038	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Clocel_1049	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Clocel_1054	SSF53098	Ribonuclease H-like
Clocel_1056	SSF54197	HIT-like
Clocel_1057	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Clocel_1065	SSF46785	"Winged helix" DNA-binding domain
Clocel_1080	SSF47188	Hemerythrin-like
Clocel_1081	SSF53098	Ribonuclease H-like
Clocel_1086	SSF56784	HAD-like
Clocel_1104	SSF48452	TPR-like
Clocel_1104	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clocel_1105	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
Clocel_1105	SSF52374	Nucleotidylyl transferase
Clocel_1106	SSF53474	alpha/beta-Hydrolases
Clocel_1108	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clocel_1108	SSF90123	ABC transporter transmembrane region
Clocel_1109	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clocel_1114	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clocel_1150	SSF51445	(Trans)glycosidases
Clocel_1150	SSF63446	Type I dockerin domain
Clocel_1152	SSF49265	Fibronectin type III
Clocel_1152	SSF51445	(Trans)glycosidases
Clocel_1157	SSF53163	HybD-like
Clocel_1174	SSF48208	Six-hairpin glycosidases
Clocel_1174	SSF63446	Type I dockerin domain
Clocel_1177	SSF102114	Radical SAM enzymes
Clocel_1177	SSF54862	4Fe-4S ferredoxins
Clocel_1180	SSF49384	Carbohydrate-binding domain
Clocel_1181	SSF49384	Carbohydrate-binding domain
Clocel_1182	SSF49384	Carbohydrate-binding domain
Clocel_1183	SSF49265	Fibronectin type III
Clocel_1184	SSF49265	Fibronectin type III
Clocel_1191	SSF53822	Periplasmic binding protein-like I
Clocel_1194	SSF51905	FAD/NAD(P)-binding domain
Clocel_1194	SSF54373	FAD-linked reductases, C-terminal domain
Clocel_1200	SSF46785	"Winged helix" DNA-binding domain
Clocel_1200	SSF51206	cAMP-binding domain-like
Clocel_1210	SSF49373	Invasin/intimin cell-adhesion fragments
Clocel_1210	SSF54001	Cysteine proteinases
Clocel_1215	SSF46785	"Winged helix" DNA-binding domain
Clocel_1215	SSF53383	PLP-dependent transferases
Clocel_1225	SSF52743	Subtilisin-like
Clocel_1227	SSF52743	Subtilisin-like
Clocel_1232	SSF110997	Sporulation related repeat
Clocel_1232	SSF55846	N-acetylmuramoyl-L-alanine amidase-like
Clocel_1245	SSF161098	MetI-like
Clocel_1250	SSF53067	Actin-like ATPase domain
Clocel_1250	SSF54292	2Fe-2S ferredoxin-like
Clocel_1264	SSF89392	Prokaryotic lipoproteins and lipoprotein localization factors
Clocel_1278	SSF100920	Heat shock protein 70kD (HSP70), peptide-binding domain
Clocel_1278	SSF53067	Actin-like ATPase domain
Clocel_1281	SSF103642	Sec-C motif
Clocel_1281	SSF55920	Creatinase/aminopeptidase
Clocel_1293	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clocel_1294	SSF159283	Guanosine diphospho-D-mannose pyrophosphorylase/mannose-6-phosphate isomerase linker domain
Clocel_1294	SSF53448	Nucleotide-diphospho-sugar transferases
Clocel_1306	SSF50985	RCC1/BLIP-II
Clocel_1307	SSF50985	RCC1/BLIP-II
Clocel_1321	SSF110921	2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain
Clocel_1321	SSF51569	Aldolase
Clocel_1327	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clocel_1329	SSF51161	Trimeric LpxA-like enzymes
Clocel_1331	SSF69593	Glycerol-3-phosphate (1)-acyltransferase
Clocel_1332	SSF48150	DNA-glycosylase
Clocel_1334	SSF47240	Ferritin-like
Clocel_1334	SSF57802	Rubredoxin-like
Clocel_1340	SSF102114	Radical SAM enzymes
Clocel_1341	SSF51445	(Trans)glycosidases
Clocel_1343	SSF54001	Cysteine proteinases
Clocel_1349	SSF53649	Alkaline phosphatase-like
Clocel_1354	SSF161098	MetI-like
Clocel_1367	SSF51445	(Trans)glycosidases
Clocel_1367	SSF81296	E set domains
Clocel_1374	SSF53649	Alkaline phosphatase-like
Clocel_1378	SSF55326	PurM N-terminal domain-like
Clocel_1378	SSF56042	PurM C-terminal domain-like
Clocel_1379	SSF52972	ITPase-like
Clocel_1380	SSF56300	Metallo-dependent phosphatases
Clocel_1382	SSF50985	RCC1/BLIP-II
Clocel_1383	SSF143422	Transposase IS200-like
Clocel_1388	SSF53271	PRTase-like
Clocel_1394	SSF101898	NHL repeat
Clocel_1396	SSF63829	Calcium-dependent phosphotriesterase
Clocel_1400	SSF56784	HAD-like
Clocel_1400	SSF81653	Calcium ATPase, transduction domain A
Clocel_1400	SSF81660	Metal cation-transporting ATPase, ATP-binding domain N
Clocel_1400	SSF81665	Calcium ATPase, transmembrane domain M
Clocel_1403	SSF88713	Glycoside hydrolase/deacetylase
Clocel_1404	SSF46785	"Winged helix" DNA-binding domain
Clocel_1404	SSF53850	Periplasmic binding protein-like II
Clocel_1407	SSF48019	post-AAA+ oligomerization domain-like
Clocel_1407	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clocel_1408	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clocel_1413	SSF102114	Radical SAM enzymes
Clocel_1417	SSF46565	Chaperone J-domain
Clocel_1417	SSF49493	HSP40/DnaJ peptide-binding domain
Clocel_1417	SSF57938	DnaJ/Hsp40 cysteine-rich domain
Clocel_1421	SSF46785	"Winged helix" DNA-binding domain
Clocel_1426	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clocel_1426	SSF90123	ABC transporter transmembrane region
Clocel_1428	SSF111369	HlyD-like secretion proteins
Clocel_1446	SSF109604	HD-domain/PDEase-like
Clocel_1448	SSF48317	Acid phosphatase/Vanadium-dependent haloperoxidase
Clocel_1451	SSF50249	Nucleic acid-binding proteins
Clocel_1451	SSF57863	ArfGap/RecO-like zinc finger
Clocel_1455	SSF49373	Invasin/intimin cell-adhesion fragments
Clocel_1455	SSF51445	(Trans)glycosidases
Clocel_1457	SSF56731	DNA primase core
Clocel_1457	SSF57783	Zinc beta-ribbon
Clocel_1470	SSF56281	Metallo-hydrolase/oxidoreductase
Clocel_1472	SSF143865	CorA soluble domain-like
Clocel_1472	SSF144083	Magnesium transport protein CorA, transmembrane region
Clocel_1478	SSF48208	Six-hairpin glycosidases
Clocel_1478	SSF49785	Galactose-binding domain-like
Clocel_1478	SSF81296	E set domains
Clocel_1500	SSF53067	Actin-like ATPase domain
Clocel_1509	SSF158472	HAMP domain-like
Clocel_1509	SSF47384	Homodimeric domain of signal transducing histidine kinase
Clocel_1509	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Clocel_1513	SSF47413	lambda repressor-like DNA-binding domains
Clocel_1513	SSF53822	Periplasmic binding protein-like I
Clocel_1523	SSF55008	HMA, heavy metal-associated domain
Clocel_1523	SSF56784	HAD-like
Clocel_1523	SSF81653	Calcium ATPase, transduction domain A
Clocel_1523	SSF81665	Calcium ATPase, transmembrane domain M
Clocel_1530	SSF161098	MetI-like
Clocel_1535	SSF53633	Carbamate kinase-like
Clocel_1535	SSF88697	PUA domain-like
Clocel_1538	SSF56601	beta-lactamase/transpeptidase-like
Clocel_1542	SSF53448	Nucleotide-diphospho-sugar transferases
Clocel_1544	SSF52743	Subtilisin-like
Clocel_1548	SSF52743	Subtilisin-like
Clocel_1567	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clocel_1567	SSF57716	Glucocorticoid receptor-like (DNA-binding domain)
Clocel_1568	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clocel_1568	SSF54211	Ribosomal protein S5 domain 2-like
Clocel_1569	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clocel_1569	SSF54211	Ribosomal protein S5 domain 2-like
Clocel_1569	SSF88697	PUA domain-like
Clocel_1577	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clocel_1577	SSF88723	PIN domain-like
Clocel_1613	SSF53271	PRTase-like
Clocel_1613	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
Clocel_1625	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clocel_1627	SSF53187	Zn-dependent exopeptidases
Clocel_1627	SSF55031	Bacterial exopeptidase dimerisation domain
Clocel_1637	SSF102114	Radical SAM enzymes
Clocel_1668	SSF52768	Arginase/deacetylase
Clocel_1678	SSF51717	Dihydropteroate synthetase-like
Clocel_1683	SSF88713	Glycoside hydrolase/deacetylase
Clocel_1686	SSF56784	HAD-like
Clocel_1691	SSF52738	Methylesterase CheB, C-terminal domain
Clocel_1693	SSF47226	Histidine-containing phosphotransfer domain, HPT domain
Clocel_1693	SSF47384	Homodimeric domain of signal transducing histidine kinase
Clocel_1693	SSF50341	CheW-like
Clocel_1693	SSF55052	CheY-binding domain of CheA
Clocel_1693	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Clocel_1696	SSF50341	CheW-like
Clocel_1710	SSF64518	Phase 1 flagellin
Clocel_1725	SSF103088	OmpA-like
Clocel_1730	SSF160544	EscU C-terminal domain-like
Clocel_1750	SSF54184	Penicillin-binding protein 2x (pbp-2x), c-terminal domain
Clocel_1750	SSF56519	Penicillin binding protein dimerisation domain
Clocel_1750	SSF56601	beta-lactamase/transpeptidase-like
Clocel_1760	SSF51419	PLP-binding barrel
Clocel_1767	SSF53271	PRTase-like
Clocel_1770	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clocel_1770	SSF54211	Ribosomal protein S5 domain 2-like
Clocel_1773	SSF46785	"Winged helix" DNA-binding domain
Clocel_1774	SSF52313	Ribosomal protein S2
Clocel_1781	SSF50156	PDZ domain-like
Clocel_1787	SSF55315	L30e-like
Clocel_1788	SSF50447	Translation proteins
Clocel_1788	SSF52156	Initiation factor IF2/eIF5b, domain 3
Clocel_1788	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clocel_1791	SSF55120	Pseudouridine synthase
Clocel_1797	SSF53633	Carbamate kinase-like
Clocel_1797	SSF55021	ACT-like
Clocel_1798	SSF52096	ClpP/crotonase
Clocel_1806	SSF143422	Transposase IS200-like
Clocel_1807	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clocel_1808	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clocel_1808	SSF52980	Restriction endonuclease-like
Clocel_1809	SSF109604	HD-domain/PDEase-like
Clocel_1809	SSF50249	Nucleic acid-binding proteins
Clocel_1811	SSF51998	PFL-like glycyl radical enzymes
Clocel_1815	SSF81330	Gated mechanosensitive channel
Clocel_1841	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
Clocel_1841	SSF88946	Sigma2 domain of RNA polymerase sigma factors
Clocel_1844	SSF53448	Nucleotide-diphospho-sugar transferases
Clocel_1846	SSF52490	Tubulin nucleotide-binding domain-like
Clocel_1846	SSF55307	Tubulin C-terminal domain-like
Clocel_1850	SSF50346	PRC-barrel domain
Clocel_1861	SSF102114	Radical SAM enzymes
Clocel_1861	SSF50156	PDZ domain-like
Clocel_1863	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clocel_1865	SSF53774	Glutaminase/Asparaginase
Clocel_1874	SSF50486	FMT C-terminal domain-like
Clocel_1874	SSF53328	Formyltransferase
Clocel_1877	SSF81606	PP2C-like
Clocel_1884	SSF101473	DhaL-like
Clocel_1885	SSF50249	Nucleic acid-binding proteins
Clocel_1885	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clocel_1889	SSF81665	Calcium ATPase, transmembrane domain M
Clocel_1897	SSF54768	dsRNA-binding domain-like
Clocel_1897	SSF69065	RNase III domain-like
Clocel_1899	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clocel_1899	SSF75553	Smc hinge domain
Clocel_1906	SSF75217	alpha/beta knot
Clocel_1908	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clocel_1909	SSF53098	Ribonuclease H-like
Clocel_1920	SSF53092	Creatinase/prolidase N-terminal domain
Clocel_1920	SSF55920	Creatinase/aminopeptidase
Clocel_1923	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clocel_1939	SSF111331	NAD kinase/diacylglycerol kinase-like
Clocel_1941	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clocel_1942	SSF50156	PDZ domain-like
Clocel_1942	SSF50494	Trypsin-like serine proteases
Clocel_1948	SSF53383	PLP-dependent transferases
Clocel_1951	SSF88688	Families 57/38 glycoside transferase middle domain
Clocel_1951	SSF88713	Glycoside hydrolase/deacetylase
Clocel_1963	SSF53383	PLP-dependent transferases
Clocel_1986	SSF143422	Transposase IS200-like
Clocel_1989	SSF46689	Homeodomain-like
Clocel_2000	SSF47384	Homodimeric domain of signal transducing histidine kinase
Clocel_2000	SSF55785	PYP-like sensor domain (PAS domain)
Clocel_2000	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Clocel_2002	SSF54001	Cysteine proteinases
Clocel_2006	SSF54364	Translation initiation factor IF3, N-terminal domain
Clocel_2006	SSF55200	Translation initiation factor IF3, C-terminal domain
Clocel_2013	SSF75304	Amidase signature (AS) enzymes
Clocel_2019	SSF47240	Ferritin-like
Clocel_2020	SSF51011	Glycosyl hydrolase domain
Clocel_2020	SSF51445	(Trans)glycosidases
Clocel_2022	SSF51445	(Trans)glycosidases
Clocel_2022	SSF52317	Class I glutamine amidotransferase-like
Clocel_2024	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
Clocel_2025	SSF102829	Cell division protein ZapA-like
Clocel_2033	SSF118116	DNA mismatch repair protein MutL
Clocel_2033	SSF54211	Ribosomal protein S5 domain 2-like
Clocel_2033	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Clocel_2034	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clocel_2048	SSF56601	beta-lactamase/transpeptidase-like
Clocel_2049	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
Clocel_2049	SSF88946	Sigma2 domain of RNA polymerase sigma factors
Clocel_2062	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clocel_2062	SSF54752	RecA protein, C-terminal domain
Clocel_2064	SSF102114	Radical SAM enzymes
Clocel_2065	SSF46785	"Winged helix" DNA-binding domain
Clocel_2065	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clocel_2074	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
Clocel_2075	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
Clocel_2090	SSF53474	alpha/beta-Hydrolases
Clocel_2094	SSF102114	Radical SAM enzymes
Clocel_2125	SSF160443	SMR domain-like
Clocel_2125	SSF48334	DNA repair protein MutS, domain III
Clocel_2125	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clocel_2127	SSF88713	Glycoside hydrolase/deacetylase
Clocel_2140	SSF160996	HI0933 insert domain-like
Clocel_2140	SSF51905	FAD/NAD(P)-binding domain
Clocel_2151	SSF47384	Homodimeric domain of signal transducing histidine kinase
Clocel_2151	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Clocel_2151	SSF63829	Calcium-dependent phosphotriesterase
Clocel_2165	SSF51905	FAD/NAD(P)-binding domain
Clocel_2165	SSF56425	Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain
Clocel_2166	SSF51690	Nicotinate/Quinolinate PRTase C-terminal domain-like
Clocel_2166	SSF54675	Nicotinate/Quinolinate PRTase N-terminal domain-like
Clocel_2172	SSF56214	4'-phosphopantetheinyl transferase
Clocel_2173	SSF103190	Sensory domain-like
Clocel_2173	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
Clocel_2183	SSF52788	Phosphotyrosine protein phosphatases I
Clocel_2192	SSF49384	Carbohydrate-binding domain
Clocel_2194	SSF49384	Carbohydrate-binding domain
Clocel_2210	SSF52733	Nicotinate mononucleotide:5,6-dimethylbenzimidazole phosphoribosyltransferase (CobT)
Clocel_2211	SSF53254	Phosphoglycerate mutase-like
Clocel_2222	SSF53790	Tetrapyrrole methylase
Clocel_2247	SSF143548	Serine metabolism enzymes domain
Clocel_2247	SSF55021	ACT-like
Clocel_2252	SSF88713	Glycoside hydrolase/deacetylase
Clocel_2253	SSF46785	"Winged helix" DNA-binding domain
Clocel_2253	SSF48008	GntR ligand-binding domain-like
Clocel_2254	SSF51126	Pectin lyase-like
Clocel_2273	SSF47413	lambda repressor-like DNA-binding domains
Clocel_2276	SSF47413	lambda repressor-like DNA-binding domains
Clocel_2281	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clocel_2281	SSF90123	ABC transporter transmembrane region
Clocel_2282	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clocel_2282	SSF90123	ABC transporter transmembrane region
Clocel_2286	SSF48452	TPR-like
Clocel_2286	SSF52200	Toll/Interleukin receptor TIR domain
Clocel_2286	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clocel_2295	SSF49899	Concanavalin A-like lectins/glucanases
Clocel_2295	SSF63446	Type I dockerin domain
Clocel_2295	SSF88713	Glycoside hydrolase/deacetylase
Clocel_2298	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Clocel_2300	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Clocel_2322	SSF47413	lambda repressor-like DNA-binding domains
Clocel_2340	SSF143422	Transposase IS200-like
Clocel_2342	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clocel_2354	SSF109709	KorB DNA-binding domain-like
Clocel_2354	SSF110849	ParB/Sulfiredoxin
Clocel_2359	SSF51120	beta-Roll
Clocel_2360	SSF51120	beta-Roll
Clocel_2361	SSF51120	beta-Roll
Clocel_2362	SSF51120	beta-Roll
Clocel_2363	SSF51120	beta-Roll
Clocel_2364	SSF51120	beta-Roll
Clocel_2374	SSF63411	LuxS/MPP-like metallohydrolase
Clocel_2375	SSF52317	Class I glutamine amidotransferase-like
Clocel_2377	SSF54211	Ribosomal protein S5 domain 2-like
Clocel_2377	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Clocel_2377	SSF56719	Type II DNA topoisomerase
Clocel_2381	SSF64518	Phase 1 flagellin
Clocel_2382	SSF64518	Phase 1 flagellin
Clocel_2386	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
Clocel_2387	SSF51269	AFP III-like domain
Clocel_2387	SSF51569	Aldolase
Clocel_2393	SSF54975	Acylphosphatase/BLUF domain-like
Clocel_2410	SSF51556	Metallo-dependent hydrolases
Clocel_2445	SSF56349	DNA breaking-rejoining enzymes
Clocel_2455	SSF47413	lambda repressor-like DNA-binding domains
Clocel_2460	SSF55816	5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain
Clocel_2460	SSF56300	Metallo-dependent phosphatases
Clocel_2461	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clocel_2461	SSF90123	ABC transporter transmembrane region
Clocel_2464	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clocel_2465	SSF51120	beta-Roll
Clocel_2473	SSF102114	Radical SAM enzymes
Clocel_2477	SSF46785	"Winged helix" DNA-binding domain
Clocel_2479	SSF53383	PLP-dependent transferases
Clocel_2482	SSF47336	ACP-like
Clocel_2482	SSF52777	CoA-dependent acyltransferases
Clocel_2482	SSF53474	alpha/beta-Hydrolases
Clocel_2482	SSF56801	Acetyl-CoA synthetase-like
Clocel_2484	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clocel_2484	SSF90123	ABC transporter transmembrane region
Clocel_2486	SSF47336	ACP-like
Clocel_2486	SSF52777	CoA-dependent acyltransferases
Clocel_2486	SSF53474	alpha/beta-Hydrolases
Clocel_2486	SSF56801	Acetyl-CoA synthetase-like
Clocel_2487	SSF47336	ACP-like
Clocel_2487	SSF52777	CoA-dependent acyltransferases
Clocel_2487	SSF56801	Acetyl-CoA synthetase-like
Clocel_2488	SSF47336	ACP-like
Clocel_2488	SSF52777	CoA-dependent acyltransferases
Clocel_2488	SSF56801	Acetyl-CoA synthetase-like
Clocel_2490	SSF158472	HAMP domain-like
Clocel_2490	SSF47384	Homodimeric domain of signal transducing histidine kinase
Clocel_2490	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Clocel_2492	SSF54862	4Fe-4S ferredoxins
Clocel_2493	SSF143631	ApbE-like
Clocel_2494	SSF141868	EAL domain-like
Clocel_2494	SSF55073	Nucleotide cyclase
Clocel_2501	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
Clocel_2504	SSF53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes
Clocel_2515	SSF52833	Thioredoxin-like
Clocel_2523	SSF143422	Transposase IS200-like
Clocel_2528	SSF54862	4Fe-4S ferredoxins
Clocel_2529	SSF103473	MFS general substrate transporter
Clocel_2530	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clocel_2535	SSF49373	Invasin/intimin cell-adhesion fragments
Clocel_2535	SSF49899	Concanavalin A-like lectins/glucanases
Clocel_2535	SSF75005	Arabinanase/levansucrase/invertase
Clocel_2537	SSF52172	CheY-like
Clocel_2541	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
Clocel_2543	SSF52172	CheY-like
Clocel_2543	SSF52738	Methylesterase CheB, C-terminal domain
Clocel_2555	SSF56059	Glutathione synthetase ATP-binding domain-like
Clocel_2583	SSF52833	Thioredoxin-like
Clocel_2585	SSF54292	2Fe-2S ferredoxin-like
Clocel_2585	SSF54862	4Fe-4S ferredoxins
Clocel_2588	SSF140490	Nqo1C-terminal domain-like
Clocel_2588	SSF142019	Nqo1 FMN-binding domain-like
Clocel_2588	SSF142984	Nqo1 middle domain-like
Clocel_2588	SSF52833	Thioredoxin-like
Clocel_2588	SSF54862	4Fe-4S ferredoxins
Clocel_2592	SSF46689	Homeodomain-like
Clocel_2592	SSF52172	CheY-like
Clocel_2598	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clocel_2621	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clocel_2631	SSF52402	Adenine nucleotide alpha hydrolases-like
Clocel_2631	SSF52467	DHS-like NAD/FAD-binding domain
Clocel_2632	SSF52402	Adenine nucleotide alpha hydrolases-like
Clocel_2635	SSF47336	ACP-like
Clocel_2642	SSF51126	Pectin lyase-like
Clocel_2655	SSF47413	lambda repressor-like DNA-binding domains
Clocel_2656	SSF53098	Ribonuclease H-like
Clocel_2661	SSF52980	Restriction endonuclease-like
Clocel_2663	SSF53187	Zn-dependent exopeptidases
Clocel_2673	SSF55383	Copper amine oxidase, domain N
Clocel_2674	SSF53098	Ribonuclease H-like
Clocel_2677	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clocel_2677	SSF55021	ACT-like
Clocel_2682	SSF56059	Glutathione synthetase ATP-binding domain-like
Clocel_2684	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clocel_2703	SSF55136	Probable bacterial effector-binding domain
Clocel_2705	SSF52743	Subtilisin-like
Clocel_2711	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Clocel_2716	SSF49899	Concanavalin A-like lectins/glucanases
Clocel_2718	SSF49785	Galactose-binding domain-like
Clocel_2718	SSF49899	Concanavalin A-like lectins/glucanases
Clocel_2723	SSF46689	Homeodomain-like
Clocel_2723	SSF52172	CheY-like
Clocel_2730	SSF47807	5' to 3' exonuclease, C-terminal subdomain
Clocel_2730	SSF53098	Ribonuclease H-like
Clocel_2730	SSF56672	DNA/RNA polymerases
Clocel_2730	SSF88723	PIN domain-like
Clocel_2731	SSF52980	Restriction endonuclease-like
Clocel_2740	SSF53633	Carbamate kinase-like
Clocel_2740	SSF55021	ACT-like
Clocel_2753	SSF50249	Nucleic acid-binding proteins
Clocel_2761	SSF55229	Cell division protein MinE topological specificity domain
Clocel_2765	SSF56519	Penicillin binding protein dimerisation domain
Clocel_2765	SSF56601	beta-lactamase/transpeptidase-like
Clocel_2784	SSF81901	HCP-like
Clocel_2786	SSF46689	Homeodomain-like
Clocel_2786	SSF51182	RmlC-like cupins
Clocel_2789	SSF50249	Nucleic acid-binding proteins
Clocel_2801	SSF48452	TPR-like
Clocel_2801	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clocel_2801	SSF55073	Nucleotide cyclase
Clocel_2801	SSF55781	GAF domain-like
Clocel_2801	SSF56112	Protein kinase-like (PK-like)
Clocel_2805	SSF56281	Metallo-hydrolase/oxidoreductase
Clocel_2810	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clocel_2815	SSF49785	Galactose-binding domain-like
Clocel_2817	SSF110296	Oligoxyloglucan reducing end-specific cellobiohydrolase
Clocel_2818	SSF51445	(Trans)glycosidases
Clocel_2818	SSF63446	Type I dockerin domain
Clocel_2819	SSF48208	Six-hairpin glycosidases
Clocel_2819	SSF63446	Type I dockerin domain
Clocel_2822	SSF48208	Six-hairpin glycosidases
Clocel_2822	SSF49384	Carbohydrate-binding domain
Clocel_2822	SSF63446	Type I dockerin domain
Clocel_2824	SSF49384	Carbohydrate-binding domain
Clocel_2824	SSF81296	E set domains
Clocel_2826	SSF88946	Sigma2 domain of RNA polymerase sigma factors
Clocel_2828	SSF51569	Aldolase
Clocel_2830	SSF102114	Radical SAM enzymes
Clocel_2830	SSF53146	Nitrogenase accessory factor-like
Clocel_2830	SSF53807	"Helical backbone" metal receptor
Clocel_2847	SSF51230	Single hybrid motif
Clocel_2850	SSF51120	beta-Roll
Clocel_2853	SSF56024	Phospholipase D/nuclease
Clocel_2854	SSF46689	Homeodomain-like
Clocel_2854	SSF48498	Tetracyclin repressor-like, C-terminal domain
Clocel_2859	SSF53649	Alkaline phosphatase-like
Clocel_2860	SSF109604	HD-domain/PDEase-like
Clocel_2862	SSF140356	PPK N-terminal domain-like
Clocel_2862	SSF143724	PHP14-like
Clocel_2862	SSF56024	Phospholipase D/nuclease
Clocel_2869	SSF50331	MOP-like
Clocel_2869	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clocel_2882	SSF51445	(Trans)glycosidases
Clocel_2886	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clocel_2886	SSF90123	ABC transporter transmembrane region
Clocel_2888	SSF46785	"Winged helix" DNA-binding domain
Clocel_2893	SSF143422	Transposase IS200-like
Clocel_2896	SSF47644	Methionine synthase domain
Clocel_2896	SSF51717	Dihydropteroate synthetase-like
Clocel_2896	SSF52242	Cobalamin (vitamin B12)-binding domain
Clocel_2896	SSF56507	Methionine synthase activation domain-like
Clocel_2896	SSF82282	Homocysteine S-methyltransferase
Clocel_2900	SSF49785	Galactose-binding domain-like
Clocel_2900	SSF51445	(Trans)glycosidases
Clocel_2900	SSF63446	Type I dockerin domain
Clocel_2906	SSF53623	MurD-like peptide ligases, catalytic domain
Clocel_2930	SSF103473	MFS general substrate transporter
Clocel_2935	SSF54060	His-Me finger endonucleases
Clocel_2969	SSF100950	NagB/RpiA/CoA transferase-like
Clocel_2969	SSF46785	"Winged helix" DNA-binding domain
Clocel_2975	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
Clocel_2975	SSF56645	Acyl-CoA dehydrogenase NM domain-like
Clocel_2979	SSF46689	Homeodomain-like
Clocel_2979	SSF55073	Nucleotide cyclase
Clocel_2980	SSF46785	"Winged helix" DNA-binding domain
Clocel_2983	SSF49265	Fibronectin type III
Clocel_2983	SSF51126	Pectin lyase-like
Clocel_2985	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Clocel_2987	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clocel_2994	SSF103084	Holliday junction resolvase RusA
Clocel_2996	SSF51905	FAD/NAD(P)-binding domain
Clocel_3014	SSF55811	Nudix
Clocel_3025	SSF53448	Nucleotide-diphospho-sugar transferases
Clocel_3027	SSF53807	"Helical backbone" metal receptor
Clocel_3030	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Clocel_3038	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clocel_3041	SSF53163	HybD-like
Clocel_3051	SSF47917	C-terminal domain of alpha and beta subunits of F1 ATP synthase
Clocel_3051	SSF50615	N-terminal domain of alpha and beta subunits of F1 ATP synthase
Clocel_3051	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clocel_3073	SSF50249	Nucleic acid-binding proteins
Clocel_3073	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clocel_3073	SSF68912	Rho N-terminal domain-like
Clocel_3087	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
Clocel_3102	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
Clocel_3102	SSF88946	Sigma2 domain of RNA polymerase sigma factors
Clocel_3108	SSF56317	Carbon-nitrogen hydrolase
Clocel_3117	SSF51120	beta-Roll
Clocel_3120	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clocel_3120	SSF90123	ABC transporter transmembrane region
Clocel_3123	SSF56801	Acetyl-CoA synthetase-like
Clocel_3130	SSF53901	Thiolase-like
Clocel_3138	SSF102114	Radical SAM enzymes
Clocel_3138	SSF51735	NAD(P)-binding Rossmann-fold domains
Clocel_3154	SSF143422	Transposase IS200-like
Clocel_3165	SSF158472	HAMP domain-like
Clocel_3165	SSF47384	Homodimeric domain of signal transducing histidine kinase
Clocel_3165	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Clocel_3187	SSF48452	TPR-like
Clocel_3195	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Clocel_3196	SSF75005	Arabinanase/levansucrase/invertase
Clocel_3201	SSF53850	Periplasmic binding protein-like II
Clocel_3207	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
Clocel_3207	SSF51735	NAD(P)-binding Rossmann-fold domains
Clocel_3208	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clocel_3221	SSF141571	Pentapeptide repeat-like
Clocel_3226	SSF102114	Radical SAM enzymes
Clocel_3227	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clocel_3227	SSF54752	RecA protein, C-terminal domain
Clocel_3233	SSF48452	TPR-like
Clocel_3233	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clocel_3267	SSF50129	GroES-like
Clocel_3267	SSF51735	NAD(P)-binding Rossmann-fold domains
Clocel_3269	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Clocel_3271	SSF51419	PLP-binding barrel
Clocel_3272	SSF54862	4Fe-4S ferredoxins
Clocel_3275	SSF50370	Ricin B-like lectins
Clocel_3275	SSF75005	Arabinanase/levansucrase/invertase
Clocel_3278	SSF56112	Protein kinase-like (PK-like)
Clocel_3284	SSF46785	"Winged helix" DNA-binding domain
Clocel_3289	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Clocel_3290	SSF52218	Flavoproteins
Clocel_3297	SSF102114	Radical SAM enzymes
Clocel_3315	SSF50985	RCC1/BLIP-II
Clocel_3322	SSF56300	Metallo-dependent phosphatases
Clocel_3334	SSF53822	Periplasmic binding protein-like I
Clocel_3337	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clocel_3337	SSF90123	ABC transporter transmembrane region
Clocel_3340	SSF54862	4Fe-4S ferredoxins
Clocel_3345	SSF46689	Homeodomain-like
Clocel_3345	SSF55136	Probable bacterial effector-binding domain
Clocel_3346	SSF56672	DNA/RNA polymerases
Clocel_3358	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Clocel_3376	SSF48576	Terpenoid synthases
Clocel_3389	SSF52954	Class II aaRS ABD-related
Clocel_3389	SSF55681	Class II aaRS and biotin synthetases
Clocel_3396	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
Clocel_3396	SSF88946	Sigma2 domain of RNA polymerase sigma factors
Clocel_3405	SSF140864	TROVE domain-like
Clocel_3405	SSF53300	vWA-like
Clocel_3423	SSF103481	Multidrug resistance efflux transporter EmrE
Clocel_3430	SSF64518	Phase 1 flagellin
Clocel_3435	SSF102114	Radical SAM enzymes
Clocel_3439	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
Clocel_3439	SSF88946	Sigma2 domain of RNA polymerase sigma factors
Clocel_3443	SSF52743	Subtilisin-like
Clocel_3444	SSF53474	alpha/beta-Hydrolases
Clocel_3461	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clocel_3464	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clocel_3471	SSF161098	MetI-like
Clocel_3478	SSF52218	Flavoproteins
Clocel_3484	SSF53271	PRTase-like
Clocel_3485	SSF46785	"Winged helix" DNA-binding domain
Clocel_3485	SSF55811	Nudix
Clocel_3487	SSF47384	Homodimeric domain of signal transducing histidine kinase
Clocel_3487	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Clocel_3490	SSF51735	NAD(P)-binding Rossmann-fold domains
Clocel_3511	SSF52218	Flavoproteins
Clocel_3511	SSF56281	Metallo-hydrolase/oxidoreductase
Clocel_3516	SSF55811	Nudix
Clocel_3523	SSF55846	N-acetylmuramoyl-L-alanine amidase-like
Clocel_3533	SSF48371	ARM repeat
Clocel_3551	SSF47413	lambda repressor-like DNA-binding domains
Clocel_3555	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clocel_3555	SSF57783	Zinc beta-ribbon
Clocel_3597	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
Clocel_3597	SSF88946	Sigma2 domain of RNA polymerase sigma factors
Clocel_3601	SSF51294	Hedgehog/intein (Hint) domain
Clocel_3604	SSF51294	Hedgehog/intein (Hint) domain
Clocel_3641	SSF46689	Homeodomain-like
Clocel_3641	SSF51215	Regulatory protein AraC
Clocel_3661	SSF143422	Transposase IS200-like
Clocel_3662	SSF49785	Galactose-binding domain-like
Clocel_3662	SSF51445	(Trans)glycosidases
Clocel_3664	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
Clocel_3664	SSF88946	Sigma2 domain of RNA polymerase sigma factors
Clocel_3678	SSF143597	YojJ-like
Clocel_3683	SSF48452	TPR-like
Clocel_3686	SSF47831	Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain
Clocel_3686	SSF51621	Phosphoenolpyruvate/pyruvate domain
Clocel_3686	SSF52009	Phosphohistidine domain
Clocel_3689	SSF47413	lambda repressor-like DNA-binding domains
Clocel_3699	SSF55120	Pseudouridine synthase
Clocel_3708	SSF57840	Ribosomal protein L36
Clocel_3710	SSF50104	Translation proteins SH3-like domain
Clocel_3712	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clocel_3716	SSF54211	Ribosomal protein S5 domain 2-like
Clocel_3716	SSF54768	dsRNA-binding domain-like
Clocel_3720	SSF57716	Glucocorticoid receptor-like (DNA-binding domain)
Clocel_3722	SSF50104	Translation proteins SH3-like domain
Clocel_3724	SSF50249	Nucleic acid-binding proteins
Clocel_3727	SSF54814	Prokaryotic type KH domain (KH-domain type II)
Clocel_3727	SSF54821	Ribosomal protein S3 C-terminal domain
Clocel_3737	SSF47973	Ribosomal protein S7
Clocel_3740	SSF64484	beta and beta-prime subunits of DNA dependent RNA-polymerase
Clocel_3743	SSF160369	Ribosomal protein L10-like
Clocel_3746	SSF50104	Translation proteins SH3-like domain
Clocel_3746	SSF82679	N-utilization substance G protein NusG, N-terminal domain
Clocel_3748	SSF57829	Zn-binding ribosomal proteins
Clocel_3750	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
Clocel_3750	SSF88946	Sigma2 domain of RNA polymerase sigma factors
Clocel_3756	SSF88723	PIN domain-like
Clocel_3758	SSF143597	YojJ-like
Clocel_3758	SSF47781	RuvA domain 2-like
Clocel_3759	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clocel_3759	SSF54211	Ribosomal protein S5 domain 2-like
Clocel_3774	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
Clocel_3774	SSF88946	Sigma2 domain of RNA polymerase sigma factors
Clocel_3777	SSF51984	MurCD N-terminal domain
Clocel_3777	SSF53244	MurD-like peptide ligases, peptide-binding domain
Clocel_3777	SSF53623	MurD-like peptide ligases, catalytic domain
Clocel_3782	SSF51395	FMN-linked oxidoreductases
Clocel_3785	SSF140990	FtsH protease domain-like
Clocel_3785	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clocel_3788	SSF81606	PP2C-like
Clocel_3789	SSF143422	Transposase IS200-like
Clocel_3797	SSF47729	IHF-like DNA-binding proteins
Clocel_3798	SSF101386	all-alpha NTP pyrophosphatases
Clocel_3798	SSF53790	Tetrapyrrole methylase
Clocel_3801	SSF109998	Triger factor/SurA peptide-binding domain-like
Clocel_3801	SSF54534	FKBP-like
Clocel_3802	SSF109998	Triger factor/SurA peptide-binding domain-like
Clocel_3802	SSF54534	FKBP-like
Clocel_3804	SSF53178	Peptidyl-tRNA hydrolase-like
Clocel_3808	SSF51161	Trimeric LpxA-like enzymes
Clocel_3808	SSF53448	Nucleotide-diphospho-sugar transferases
Clocel_3817	SSF56796	Dehydroquinate synthase-like
Clocel_3829	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clocel_3829	SSF90123	ABC transporter transmembrane region
Clocel_3830	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clocel_3830	SSF90123	ABC transporter transmembrane region
Clocel_3841	SSF158472	HAMP domain-like
Clocel_3841	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Clocel_3845	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Clocel_3858	SSF102114	Radical SAM enzymes
Clocel_3868	SSF52743	Subtilisin-like
Clocel_3909	SSF63411	LuxS/MPP-like metallohydrolase
Clocel_3911	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clocel_3935	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
Clocel_3935	SSF88946	Sigma2 domain of RNA polymerase sigma factors
Clocel_3937	SSF46689	Homeodomain-like
Clocel_3937	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
Clocel_3940	SSF47336	ACP-like
Clocel_3940	SSF52777	CoA-dependent acyltransferases
Clocel_3940	SSF56801	Acetyl-CoA synthetase-like
Clocel_3942	SSF47336	ACP-like
Clocel_3942	SSF53901	Thiolase-like
Clocel_3943	SSF52151	FabD/lysophospholipase-like
Clocel_3943	SSF55048	Probable ACP-binding domain of malonyl-CoA ACP transacylase
Clocel_3944	SSF47336	ACP-like
Clocel_3944	SSF56801	Acetyl-CoA synthetase-like
Clocel_3947	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
Clocel_3947	SSF56645	Acyl-CoA dehydrogenase NM domain-like
Clocel_3949	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
Clocel_3949	SSF51735	NAD(P)-binding Rossmann-fold domains
Clocel_3951	SSF56601	beta-lactamase/transpeptidase-like
Clocel_3953	SSF50447	Translation proteins
Clocel_3953	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clocel_3953	SSF54211	Ribosomal protein S5 domain 2-like
Clocel_3953	SSF54980	EF-G C-terminal domain-like
Clocel_3976	SSF52096	ClpP/crotonase
Clocel_3981	SSF110857	Gamma-glutamyl cyclotransferase-like
Clocel_4004	SSF47413	lambda repressor-like DNA-binding domains
Clocel_4006	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clocel_4022	SSF53067	Actin-like ATPase domain
Clocel_4028	SSF52172	CheY-like
Clocel_4028	SSF52738	Methylesterase CheB, C-terminal domain
Clocel_4030	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
Clocel_4031	SSF158472	HAMP domain-like
Clocel_4035	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clocel_4036	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clocel_4050	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clocel_4072	SSF56784	HAD-like
Clocel_4077	SSF47413	lambda repressor-like DNA-binding domains
Clocel_4077	SSF53822	Periplasmic binding protein-like I
Clocel_4082	SSF46689	Homeodomain-like
Clocel_4082	SSF52172	CheY-like
Clocel_4098	SSF81301	Nucleotidyltransferase
Clocel_4100	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clocel_4108	SSF141523	L,D-transpeptidase catalytic domain-like
Clocel_4111	SSF52743	Subtilisin-like
Clocel_4112	SSF52743	Subtilisin-like
Clocel_4116	SSF56219	DNase I-like
Clocel_4119	SSF49785	Galactose-binding domain-like
Clocel_4119	SSF51445	(Trans)glycosidases
Clocel_4119	SSF63446	Type I dockerin domain
Clocel_4122	SSF102114	Radical SAM enzymes
Clocel_4122	SSF48452	TPR-like
Clocel_4127	SSF102114	Radical SAM enzymes
Clocel_4127	SSF48452	TPR-like
Clocel_4131	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clocel_4132	SSF46689	Homeodomain-like
Clocel_4145	SSF46785	"Winged helix" DNA-binding domain
Clocel_4146	SSF50037	C-terminal domain of transcriptional repressors
Clocel_4146	SSF55681	Class II aaRS and biotin synthetases
Clocel_4147	SSF51412	Inosine monophosphate dehydrogenase (IMPDH)
Clocel_4161	SSF53474	alpha/beta-Hydrolases
Clocel_4163	SSF56801	Acetyl-CoA synthetase-like
Clocel_4178	SSF52172	CheY-like
Clocel_4184	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
Clocel_4184	SSF54862	4Fe-4S ferredoxins
Clocel_4190	SSF55620	Tetrahydrobiopterin biosynthesis enzymes-like
Clocel_4231	SSF56821	Prismane protein-like
Clocel_4251	SSF158745	LanC-like
Clocel_4261	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clocel_4261	SSF90123	ABC transporter transmembrane region
Clocel_4262	SSF158745	LanC-like
Clocel_4271	SSF90123	ABC transporter transmembrane region
Clocel_4277	SSF46548	alpha-helical ferredoxin
Clocel_4277	SSF51430	NAD(P)-linked oxidoreductase
Clocel_4285	SSF54060	His-Me finger endonucleases
Clocel_4299	SSF47413	lambda repressor-like DNA-binding domains
Clocel_4301	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Clocel_4303	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
Clocel_4305	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clocel_4307	SSF143865	CorA soluble domain-like
Clocel_4307	SSF144083	Magnesium transport protein CorA, transmembrane region
Clocel_4318	SSF46689	Homeodomain-like
Clocel_4318	SSF55136	Probable bacterial effector-binding domain
Clocel_4332	SSF100950	NagB/RpiA/CoA transferase-like
Clocel_4351	SSF160996	HI0933 insert domain-like
Clocel_4351	SSF51905	FAD/NAD(P)-binding domain
Clocel_4360	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clocel_4360	SSF54211	Ribosomal protein S5 domain 2-like
Clocel_4372	SSF53383	PLP-dependent transferases
Clocel_4379	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Clocel_4388	SSF54211	Ribosomal protein S5 domain 2-like