Clole_0001	SSF48295	TrpR-like
Clole_0001	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_0002	SSF55979	DNA clamp
Clole_0003	SSF55174	Alpha-L RNA-binding motif
Clole_0004	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_0005	SSF54211	Ribosomal protein S5 domain 2-like
Clole_0005	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Clole_0005	SSF56719	Type II DNA topoisomerase
Clole_0006	SSF101904	GyrA/ParC C-terminal domain-like
Clole_0006	SSF56719	Type II DNA topoisomerase
Clole_0008	SSF46557	GreA transcript cleavage protein, N-terminal domain
Clole_0008	SSF54534	FKBP-like
Clole_0010	SSF53383	PLP-dependent transferases
Clole_0011	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_0012	SSF158397	TM1646-like
Clole_0013	SSF48019	post-AAA+ oligomerization domain-like
Clole_0013	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_0015	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Clole_0016	SSF53790	Tetrapyrrole methylase
Clole_0017	SSF51219	TRAP-like
Clole_0018	SSF158472	HAMP domain-like
Clole_0018	SSF47384	Homodimeric domain of signal transducing histidine kinase
Clole_0018	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Clole_0019	SSF52172	CheY-like
Clole_0020	SSF46934	UBA-like
Clole_0023	SSF56219	DNase I-like
Clole_0024	SSF141571	Pentapeptide repeat-like
Clole_0025	SSF53067	Actin-like ATPase domain
Clole_0026	SSF51658	Xylose isomerase-like
Clole_0027	SSF46785	"Winged helix" DNA-binding domain
Clole_0027	SSF53067	Actin-like ATPase domain
Clole_0031	SSF47384	Homodimeric domain of signal transducing histidine kinase
Clole_0031	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Clole_0032	SSF46894	C-terminal effector domain of the bipartite response regulators
Clole_0032	SSF52172	CheY-like
Clole_0034	SSF46785	"Winged helix" DNA-binding domain
Clole_0035	SSF52218	Flavoproteins
Clole_0038	SSF48208	Six-hairpin glycosidases
Clole_0038	SSF81296	E set domains
Clole_0040	SSF47413	lambda repressor-like DNA-binding domains
Clole_0040	SSF53822	Periplasmic binding protein-like I
Clole_0041	SSF55604	Glucose permease domain IIB
Clole_0042	SSF49899	Concanavalin A-like lectins/glucanases
Clole_0042	SSF75005	Arabinanase/levansucrase/invertase
Clole_0044	SSF55383	Copper amine oxidase, domain N
Clole_0045	SSF53850	Periplasmic binding protein-like II
Clole_0046	SSF161098	MetI-like
Clole_0047	SSF161098	MetI-like
Clole_0048	SSF50331	MOP-like
Clole_0048	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_0049	SSF46977	Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain
Clole_0049	SSF51905	FAD/NAD(P)-binding domain
Clole_0049	SSF56425	Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain
Clole_0050	SSF54862	4Fe-4S ferredoxins
Clole_0051	SSF52402	Adenine nucleotide alpha hydrolases-like
Clole_0052	SSF50447	Translation proteins
Clole_0052	SSF50465	EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
Clole_0052	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_0053	SSF55124	Nitrite/Sulfite reductase N-terminal domain-like
Clole_0053	SSF56014	Nitrite and sulphite reductase 4Fe-4S domain-like
Clole_0054	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_0056	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Clole_0058	SSF46689	Homeodomain-like
Clole_0059	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
Clole_0060	SSF101967	Adhesin YadA, collagen-binding domain
Clole_0061	SSF53300	vWA-like
Clole_0062	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_0066	SSF46689	Homeodomain-like
Clole_0067	SSF56281	Metallo-hydrolase/oxidoreductase
Clole_0068	SSF56601	beta-lactamase/transpeptidase-like
Clole_0069	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_0075	SSF46955	Putative DNA-binding domain
Clole_0075	SSF89082	Antibiotic binding domain of TipA-like multidrug resistance regulators
Clole_0076	SSF55811	Nudix
Clole_0077	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_0078	SSF53597	Dihydrofolate reductase-like
Clole_0079	SSF52172	CheY-like
Clole_0080	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Clole_0086	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_0086	SSF90123	ABC transporter transmembrane region
Clole_0087	SSF111369	HlyD-like secretion proteins
Clole_0089	SSF102114	Radical SAM enzymes
Clole_0089	SSF48452	TPR-like
Clole_0093	SSF102114	Radical SAM enzymes
Clole_0095	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_0097	SSF46785	"Winged helix" DNA-binding domain
Clole_0097	SSF47819	HRDC-like
Clole_0097	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_0099	SSF103642	Sec-C motif
Clole_0103	SSF52172	CheY-like
Clole_0104	SSF158472	HAMP domain-like
Clole_0104	SSF47384	Homodimeric domain of signal transducing histidine kinase
Clole_0104	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Clole_0105	SSF52218	Flavoproteins
Clole_0106	SSF55486	Metalloproteases ("zincins"), catalytic domain
Clole_0109	SSF51011	Glycosyl hydrolase domain
Clole_0109	SSF51445	(Trans)glycosidases
Clole_0110	SSF110921	2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain
Clole_0110	SSF51569	Aldolase
Clole_0113	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_0113	SSF90123	ABC transporter transmembrane region
Clole_0117	SSF46894	C-terminal effector domain of the bipartite response regulators
Clole_0117	SSF52172	CheY-like
Clole_0118	SSF158472	HAMP domain-like
Clole_0118	SSF47384	Homodimeric domain of signal transducing histidine kinase
Clole_0118	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Clole_0119	SSF89392	Prokaryotic lipoproteins and lipoprotein localization factors
Clole_0122	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_0123	SSF46785	"Winged helix" DNA-binding domain
Clole_0124	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_0124	SSF90123	ABC transporter transmembrane region
Clole_0128	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_0131	SSF46785	"Winged helix" DNA-binding domain
Clole_0132	SSF52954	Class II aaRS ABD-related
Clole_0132	SSF55186	ThrRS/AlaRS common domain
Clole_0132	SSF55681	Class II aaRS and biotin synthetases
Clole_0135	SSF46689	Homeodomain-like
Clole_0136	SSF46548	alpha-helical ferredoxin
Clole_0136	SSF51971	Nucleotide-binding domain
Clole_0137	SSF141523	L,D-transpeptidase catalytic domain-like
Clole_0140	SSF46785	"Winged helix" DNA-binding domain
Clole_0141	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_0145	SSF56634	Heme-dependent catalase-like
Clole_0147	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_0149	SSF54001	Cysteine proteinases
Clole_0152	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
Clole_0154	SSF46785	"Winged helix" DNA-binding domain
Clole_0154	SSF53850	Periplasmic binding protein-like II
Clole_0155	SSF52317	Class I glutamine amidotransferase-like
Clole_0156	SSF46785	"Winged helix" DNA-binding domain
Clole_0156	SSF53850	Periplasmic binding protein-like II
Clole_0158	SSF53383	PLP-dependent transferases
Clole_0159	SSF50249	Nucleic acid-binding proteins
Clole_0160	SSF50249	Nucleic acid-binding proteins
Clole_0161	SSF53807	"Helical backbone" metal receptor
Clole_0162	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_0163	SSF81345	ABC transporter involved in vitamin B12 uptake, BtuC
Clole_0164	SSF46689	Homeodomain-like
Clole_0164	SSF51215	Regulatory protein AraC
Clole_0165	SSF53474	alpha/beta-Hydrolases
Clole_0166	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
Clole_0166	SSF88946	Sigma2 domain of RNA polymerase sigma factors
Clole_0168	SSF55383	Copper amine oxidase, domain N
Clole_0169	SSF46785	"Winged helix" DNA-binding domain
Clole_0170	SSF54862	4Fe-4S ferredoxins
Clole_0170	SSF55469	FMN-dependent nitroreductase-like
Clole_0172	SSF46689	Homeodomain-like
Clole_0173	SSF160964	MalF N-terminal region-like
Clole_0173	SSF161098	MetI-like
Clole_0174	SSF161098	MetI-like
Clole_0175	SSF53850	Periplasmic binding protein-like II
Clole_0176	SSF51695	PLC-like phosphodiesterases
Clole_0182	SSF140478	LemA-like
Clole_0184	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
Clole_0187	SSF116726	TrkA C-terminal domain-like
Clole_0187	SSF46785	"Winged helix" DNA-binding domain
Clole_0188	SSF53098	Ribonuclease H-like
Clole_0189	SSF48295	TrpR-like
Clole_0190	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_0190	SSF54631	CBS-domain pair
Clole_0191	SSF161098	MetI-like
Clole_0191	SSF53850	Periplasmic binding protein-like II
Clole_0192	SSF46689	Homeodomain-like
Clole_0195	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_0196	SSF46955	Putative DNA-binding domain
Clole_0196	SSF55136	Probable bacterial effector-binding domain
Clole_0198	SSF46689	Homeodomain-like
Clole_0198	SSF53098	Ribonuclease H-like
Clole_0199	SSF55383	Copper amine oxidase, domain N
Clole_0200	SSF82171	DPP6 N-terminal domain-like
Clole_0201	SSF56784	HAD-like
Clole_0201	SSF81653	Calcium ATPase, transduction domain A
Clole_0201	SSF81660	Metal cation-transporting ATPase, ATP-binding domain N
Clole_0201	SSF81665	Calcium ATPase, transmembrane domain M
Clole_0202	SSF52980	Restriction endonuclease-like
Clole_0203	SSF46785	"Winged helix" DNA-binding domain
Clole_0206	SSF69304	Tricorn protease N-terminal domain
Clole_0207	SSF47413	lambda repressor-like DNA-binding domains
Clole_0207	SSF53822	Periplasmic binding protein-like I
Clole_0208	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
Clole_0209	SSF53850	Periplasmic binding protein-like II
Clole_0210	SSF161098	MetI-like
Clole_0211	SSF161098	MetI-like
Clole_0212	SSF51445	(Trans)glycosidases
Clole_0213	SSF53613	Ribokinase-like
Clole_0219	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
Clole_0221	SSF116726	TrkA C-terminal domain-like
Clole_0221	SSF51735	NAD(P)-binding Rossmann-fold domains
Clole_0225	SSF51306	LexA/Signal peptidase
Clole_0225	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_0227	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_0231	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Clole_0233	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Clole_0235	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_0237	SSF55811	Nudix
Clole_0238	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_0238	SSF56024	Phospholipase D/nuclease
Clole_0239	SSF158499	DnaD domain-like
Clole_0240	SSF46955	Putative DNA-binding domain
Clole_0245	SSF158472	HAMP domain-like
Clole_0245	SSF46689	Homeodomain-like
Clole_0246	SSF53850	Periplasmic binding protein-like II
Clole_0247	SSF161098	MetI-like
Clole_0248	SSF161098	MetI-like
Clole_0249	SSF49303	beta-Galactosidase/glucuronidase domain
Clole_0249	SSF49785	Galactose-binding domain-like
Clole_0249	SSF51445	(Trans)glycosidases
Clole_0250	SSF74650	Galactose mutarotase-like
Clole_0251	SSF47188	Hemerythrin-like
Clole_0252	SSF51658	Xylose isomerase-like
Clole_0253	SSF51569	Aldolase
Clole_0254	SSF46689	Homeodomain-like
Clole_0256	SSF82544	GckA/TtuD-like
Clole_0257	SSF52980	Restriction endonuclease-like
Clole_0258	SSF52058	L domain-like
Clole_0259	SSF46689	Homeodomain-like
Clole_0259	SSF51215	Regulatory protein AraC
Clole_0260	SSF48208	Six-hairpin glycosidases
Clole_0261	SSF81296	E set domains
Clole_0264	SSF48108	Carbamoyl phosphate synthetase, large subunit connection domain
Clole_0264	SSF52335	Methylglyoxal synthase-like
Clole_0264	SSF52440	PreATP-grasp domain
Clole_0264	SSF56059	Glutathione synthetase ATP-binding domain-like
Clole_0265	SSF51905	FAD/NAD(P)-binding domain
Clole_0266	SSF52788	Phosphotyrosine protein phosphatases I
Clole_0267	SSF50985	RCC1/BLIP-II
Clole_0271	SSF53474	alpha/beta-Hydrolases
Clole_0273	SSF47240	Ferritin-like
Clole_0274	SSF46785	"Winged helix" DNA-binding domain
Clole_0277	SSF51126	Pectin lyase-like
Clole_0280	SSF103473	MFS general substrate transporter
Clole_0282	SSF116726	TrkA C-terminal domain-like
Clole_0282	SSF51735	NAD(P)-binding Rossmann-fold domains
Clole_0285	SSF56281	Metallo-hydrolase/oxidoreductase
Clole_0286	SSF52402	Adenine nucleotide alpha hydrolases-like
Clole_0287	SSF52218	Flavoproteins
Clole_0288	SSF117892	Band 7/SPFH domain
Clole_0289	SSF51182	RmlC-like cupins
Clole_0293	SSF47413	lambda repressor-like DNA-binding domains
Clole_0293	SSF55234	Cyanase C-terminal domain
Clole_0295	SSF69304	Tricorn protease N-terminal domain
Clole_0295	SSF82171	DPP6 N-terminal domain-like
Clole_0298	SSF47413	lambda repressor-like DNA-binding domains
Clole_0298	SSF53822	Periplasmic binding protein-like I
Clole_0299	SSF53850	Periplasmic binding protein-like II
Clole_0300	SSF160964	MalF N-terminal region-like
Clole_0300	SSF161098	MetI-like
Clole_0301	SSF161098	MetI-like
Clole_0302	SSF51011	Glycosyl hydrolase domain
Clole_0302	SSF51445	(Trans)glycosidases
Clole_0303	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Clole_0305	SSF103007	Hypothetical protein TT1725
Clole_0306	SSF55846	N-acetylmuramoyl-L-alanine amidase-like
Clole_0307	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Clole_0311	SSF51261	Duplicated hybrid motif
Clole_0311	SSF55604	Glucose permease domain IIB
Clole_0312	SSF53850	Periplasmic binding protein-like II
Clole_0314	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Clole_0315	SSF46785	"Winged helix" DNA-binding domain
Clole_0318	SSF46785	"Winged helix" DNA-binding domain
Clole_0320	SSF55166	Hedgehog/DD-peptidase
Clole_0320	SSF55383	Copper amine oxidase, domain N
Clole_0322	SSF81301	Nucleotidyltransferase
Clole_0324	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_0325	SSF53146	Nitrogenase accessory factor-like
Clole_0326	SSF55383	Copper amine oxidase, domain N
Clole_0327	SSF53146	Nitrogenase accessory factor-like
Clole_0330	SSF54913	GlnB-like
Clole_0331	SSF55331	Tautomerase/MIF
Clole_0332	SSF51261	Duplicated hybrid motif
Clole_0334	SSF51905	FAD/NAD(P)-binding domain
Clole_0335	SSF52833	Thioredoxin-like
Clole_0336	SSF56281	Metallo-hydrolase/oxidoreductase
Clole_0337	SSF53187	Zn-dependent exopeptidases
Clole_0337	SSF55031	Bacterial exopeptidase dimerisation domain
Clole_0338	SSF53822	Periplasmic binding protein-like I
Clole_0339	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_0342	SSF51556	Metallo-dependent hydrolases
Clole_0345	SSF51206	cAMP-binding domain-like
Clole_0346	SSF51430	NAD(P)-linked oxidoreductase
Clole_0347	SSF46689	Homeodomain-like
Clole_0348	SSF103473	MFS general substrate transporter
Clole_0350	SSF102114	Radical SAM enzymes
Clole_0351	SSF46689	Homeodomain-like
Clole_0352	SSF142019	Nqo1 FMN-binding domain-like
Clole_0352	SSF46548	alpha-helical ferredoxin
Clole_0354	SSF55021	ACT-like
Clole_0355	SSF56784	HAD-like
Clole_0356	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Clole_0358	SSF46894	C-terminal effector domain of the bipartite response regulators
Clole_0358	SSF52172	CheY-like
Clole_0359	SSF47384	Homodimeric domain of signal transducing histidine kinase
Clole_0359	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Clole_0360	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_0362	SSF51905	FAD/NAD(P)-binding domain
Clole_0365	SSF56300	Metallo-dependent phosphatases
Clole_0366	SSF46785	"Winged helix" DNA-binding domain
Clole_0366	SSF51206	cAMP-binding domain-like
Clole_0367	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_0368	SSF53807	"Helical backbone" metal receptor
Clole_0369	SSF53807	"Helical backbone" metal receptor
Clole_0370	SSF53807	"Helical backbone" metal receptor
Clole_0371	SSF81345	ABC transporter involved in vitamin B12 uptake, BtuC
Clole_0372	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_0373	SSF51182	RmlC-like cupins
Clole_0375	SSF46689	Homeodomain-like
Clole_0376	SSF49764	HSP20-like chaperones
Clole_0377	SSF56300	Metallo-dependent phosphatases
Clole_0378	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_0378	SSF55021	ACT-like
Clole_0379	SSF161098	MetI-like
Clole_0380	SSF53850	Periplasmic binding protein-like II
Clole_0381	SSF53187	Zn-dependent exopeptidases
Clole_0381	SSF55031	Bacterial exopeptidase dimerisation domain
Clole_0383	SSF46689	Homeodomain-like
Clole_0384	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Clole_0385	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Clole_0386	SSF53187	Zn-dependent exopeptidases
Clole_0386	SSF55031	Bacterial exopeptidase dimerisation domain
Clole_0388	SSF53850	Periplasmic binding protein-like II
Clole_0389	SSF46946	S13-like H2TH domain
Clole_0389	SSF57716	Glucocorticoid receptor-like (DNA-binding domain)
Clole_0389	SSF81624	N-terminal domain of MutM-like DNA repair proteins
Clole_0391	SSF46785	"Winged helix" DNA-binding domain
Clole_0392	SSF51182	RmlC-like cupins
Clole_0393	SSF52218	Flavoproteins
Clole_0394	SSF46955	Putative DNA-binding domain
Clole_0395	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_0399	SSF53448	Nucleotide-diphospho-sugar transferases
Clole_0400	SSF53448	Nucleotide-diphospho-sugar transferases
Clole_0402	SSF56784	HAD-like
Clole_0406	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Clole_0410	SSF46894	C-terminal effector domain of the bipartite response regulators
Clole_0410	SSF52172	CheY-like
Clole_0412	SSF55383	Copper amine oxidase, domain N
Clole_0414	SSF140453	EsxAB dimer-like
Clole_0425	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Clole_0426	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_0428	SSF46894	C-terminal effector domain of the bipartite response regulators
Clole_0431	SSF160467	PH0987 N-terminal domain-like
Clole_0431	SSF50891	Cyclophilin-like
Clole_0431	SSF51230	Single hybrid motif
Clole_0431	SSF51246	Rudiment single hybrid motif
Clole_0431	SSF52440	PreATP-grasp domain
Clole_0431	SSF56059	Glutathione synthetase ATP-binding domain-like
Clole_0432	SSF75304	Amidase signature (AS) enzymes
Clole_0433	SSF54913	GlnB-like
Clole_0434	SSF54913	GlnB-like
Clole_0435	SSF53850	Periplasmic binding protein-like II
Clole_0436	SSF161098	MetI-like
Clole_0437	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_0439	SSF50475	FMN-binding split barrel
Clole_0441	SSF54919	Nucleoside diphosphate kinase, NDK
Clole_0442	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
Clole_0442	SSF88946	Sigma2 domain of RNA polymerase sigma factors
Clole_0444	SSF48208	Six-hairpin glycosidases
Clole_0447	SSF53850	Periplasmic binding protein-like II
Clole_0448	SSF50331	MOP-like
Clole_0449	SSF53850	Periplasmic binding protein-like II
Clole_0450	SSF161098	MetI-like
Clole_0451	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_0452	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_0453	SSF54913	GlnB-like
Clole_0454	SSF54913	GlnB-like
Clole_0455	SSF53807	"Helical backbone" metal receptor
Clole_0456	SSF53807	"Helical backbone" metal receptor
Clole_0457	SSF53807	"Helical backbone" metal receptor
Clole_0458	SSF102114	Radical SAM enzymes
Clole_0458	SSF53146	Nitrogenase accessory factor-like
Clole_0458	SSF53807	"Helical backbone" metal receptor
Clole_0459	SSF52833	Thioredoxin-like
Clole_0460	SSF51569	Aldolase
Clole_0461	SSF51569	Aldolase
Clole_0464	SSF53822	Periplasmic binding protein-like I
Clole_0467	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_0468	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_0470	SSF53383	PLP-dependent transferases
Clole_0471	SSF52025	PA domain
Clole_0471	SSF53187	Zn-dependent exopeptidases
Clole_0473	SSF51445	(Trans)glycosidases
Clole_0474	SSF53067	Actin-like ATPase domain
Clole_0477	SSF51366	Ribulose-phoshate binding barrel
Clole_0478	SSF52317	Class I glutamine amidotransferase-like
Clole_0481	SSF46689	Homeodomain-like
Clole_0481	SSF51215	Regulatory protein AraC
Clole_0482	SSF51011	Glycosyl hydrolase domain
Clole_0482	SSF51445	(Trans)glycosidases
Clole_0482	SSF74650	Galactose mutarotase-like
Clole_0485	SSF48208	Six-hairpin glycosidases
Clole_0485	SSF49384	Carbohydrate-binding domain
Clole_0487	SSF50891	Cyclophilin-like
Clole_0491	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Clole_0495	SSF52172	CheY-like
Clole_0496	SSF53850	Periplasmic binding protein-like II
Clole_0497	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
Clole_0500	SSF47413	lambda repressor-like DNA-binding domains
Clole_0500	SSF53822	Periplasmic binding protein-like I
Clole_0501	SSF50443	FucI/AraA C-terminal domain-like
Clole_0501	SSF53743	FucI/AraA N-terminal and middle domains
Clole_0502	SSF53067	Actin-like ATPase domain
Clole_0503	SSF53639	AraD/HMP-PK domain-like
Clole_0504	SSF46689	Homeodomain-like
Clole_0504	SSF52172	CheY-like
Clole_0505	SSF158472	HAMP domain-like
Clole_0505	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Clole_0506	SSF53822	Periplasmic binding protein-like I
Clole_0507	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_0511	SSF53850	Periplasmic binding protein-like II
Clole_0512	SSF50331	MOP-like
Clole_0512	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_0513	SSF161098	MetI-like
Clole_0514	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Clole_0515	SSF46689	Homeodomain-like
Clole_0515	SSF52172	CheY-like
Clole_0516	SSF55383	Copper amine oxidase, domain N
Clole_0517	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Clole_0518	SSF49344	CBD9-like
Clole_0518	SSF49785	Galactose-binding domain-like
Clole_0518	SSF51445	(Trans)glycosidases
Clole_0518	SSF55383	Copper amine oxidase, domain N
Clole_0519	SSF46785	"Winged helix" DNA-binding domain
Clole_0519	SSF53067	Actin-like ATPase domain
Clole_0521	SSF53743	FucI/AraA N-terminal and middle domains
Clole_0522	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Clole_0523	SSF46689	Homeodomain-like
Clole_0523	SSF52172	CheY-like
Clole_0524	SSF53850	Periplasmic binding protein-like II
Clole_0525	SSF161098	MetI-like
Clole_0526	SSF161098	MetI-like
Clole_0527	SSF48208	Six-hairpin glycosidases
Clole_0528	SSF49899	Concanavalin A-like lectins/glucanases
Clole_0528	SSF75005	Arabinanase/levansucrase/invertase
Clole_0529	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
Clole_0530	SSF74650	Galactose mutarotase-like
Clole_0531	SSF49785	Galactose-binding domain-like
Clole_0531	SSF52266	SGNH hydrolase
Clole_0533	SSF55205	EPT/RTPC-like
Clole_0534	SSF103365	Hypothetical protein PH1602
Clole_0535	SSF75620	Release factor
Clole_0536	SSF46689	Homeodomain-like
Clole_0536	SSF48295	TrpR-like
Clole_0537	SSF53098	Ribonuclease H-like
Clole_0538	SSF53383	PLP-dependent transferases
Clole_0539	SSF56796	Dehydroquinate synthase-like
Clole_0540	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_0541	SSF161098	MetI-like
Clole_0542	SSF161098	MetI-like
Clole_0543	SSF53850	Periplasmic binding protein-like II
Clole_0544	SSF51338	Composite domain of metallo-dependent hydrolases
Clole_0544	SSF51556	Metallo-dependent hydrolases
Clole_0545	SSF46548	alpha-helical ferredoxin
Clole_0545	SSF51395	FMN-linked oxidoreductases
Clole_0545	SSF54862	4Fe-4S ferredoxins
Clole_0546	SSF53187	Zn-dependent exopeptidases
Clole_0546	SSF55031	Bacterial exopeptidase dimerisation domain
Clole_0547	SSF51905	FAD/NAD(P)-binding domain
Clole_0550	SSF51569	Aldolase
Clole_0552	SSF53300	vWA-like
Clole_0552	SSF53850	Periplasmic binding protein-like II
Clole_0555	SSF51011	Glycosyl hydrolase domain
Clole_0555	SSF51445	(Trans)glycosidases
Clole_0557	SSF46689	Homeodomain-like
Clole_0557	SSF51215	Regulatory protein AraC
Clole_0558	SSF51445	(Trans)glycosidases
Clole_0558	SSF55545	beta-N-acetylhexosaminidase-like domain
Clole_0559	SSF51445	(Trans)glycosidases
Clole_0559	SSF52279	Beta-D-glucan exohydrolase, C-terminal domain
Clole_0560	SSF51658	Xylose isomerase-like
Clole_0561	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
Clole_0561	SSF51735	NAD(P)-binding Rossmann-fold domains
Clole_0562	SSF88713	Glycoside hydrolase/deacetylase
Clole_0563	SSF46689	Homeodomain-like
Clole_0564	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_0565	SSF46689	Homeodomain-like
Clole_0565	SSF55136	Probable bacterial effector-binding domain
Clole_0567	SSF46785	"Winged helix" DNA-binding domain
Clole_0567	SSF64288	Chorismate lyase-like
Clole_0568	SSF51569	Aldolase
Clole_0569	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
Clole_0569	SSF52922	TK C-terminal domain-like
Clole_0570	SSF158472	HAMP domain-like
Clole_0570	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Clole_0571	SSF46689	Homeodomain-like
Clole_0571	SSF52172	CheY-like
Clole_0572	SSF53850	Periplasmic binding protein-like II
Clole_0573	SSF161098	MetI-like
Clole_0574	SSF161098	MetI-like
Clole_0575	SSF49384	Carbohydrate-binding domain
Clole_0575	SSF51445	(Trans)glycosidases
Clole_0581	SSF81301	Nucleotidyltransferase
Clole_0585	SSF103473	MFS general substrate transporter
Clole_0587	SSF51735	NAD(P)-binding Rossmann-fold domains
Clole_0587	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
Clole_0588	SSF46785	"Winged helix" DNA-binding domain
Clole_0588	SSF53850	Periplasmic binding protein-like II
Clole_0589	SSF143865	CorA soluble domain-like
Clole_0589	SSF144083	Magnesium transport protein CorA, transmembrane region
Clole_0590	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Clole_0592	SSF55383	Copper amine oxidase, domain N
Clole_0594	SSF56317	Carbon-nitrogen hydrolase
Clole_0598	SSF53300	vWA-like
Clole_0599	SSF52490	Tubulin nucleotide-binding domain-like
Clole_0601	SSF53300	vWA-like
Clole_0603	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_0605	SSF46689	Homeodomain-like
Clole_0605	SSF51215	Regulatory protein AraC
Clole_0606	SSF51735	NAD(P)-binding Rossmann-fold domains
Clole_0606	SSF56327	LDH C-terminal domain-like
Clole_0607	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_0608	SSF53597	Dihydrofolate reductase-like
Clole_0609	SSF69796	Thymidylate synthase-complementing protein Thy1
Clole_0610	SSF50249	Nucleic acid-binding proteins
Clole_0611	SSF52343	Ferredoxin reductase-like, C-terminal NADP-linked domain
Clole_0611	SSF63380	Riboflavin synthase domain-like
Clole_0612	SSF46548	alpha-helical ferredoxin
Clole_0612	SSF51971	Nucleotide-binding domain
Clole_0613	SSF103190	Sensory domain-like
Clole_0613	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
Clole_0616	SSF103190	Sensory domain-like
Clole_0616	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
Clole_0617	SSF53795	PEP carboxykinase-like
Clole_0617	SSF68923	PEP carboxykinase N-terminal domain
Clole_0618	SSF53383	PLP-dependent transferases
Clole_0621	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
Clole_0623	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Clole_0624	SSF47240	Ferritin-like
Clole_0624	SSF57802	Rubredoxin-like
Clole_0627	SSF51556	Metallo-dependent hydrolases
Clole_0628	SSF109604	HD-domain/PDEase-like
Clole_0629	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
Clole_0629	SSF50249	Nucleic acid-binding proteins
Clole_0629	SSF52374	Nucleotidylyl transferase
Clole_0630	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_0630	SSF90002	Hypothetical protein YjiA, C-terminal domain
Clole_0632	SSF50729	PH domain-like
Clole_0634	SSF102198	Putative cyclase
Clole_0636	SSF56784	HAD-like
Clole_0637	SSF46785	"Winged helix" DNA-binding domain
Clole_0638	SSF103473	MFS general substrate transporter
Clole_0639	SSF55383	Copper amine oxidase, domain N
Clole_0640	SSF55383	Copper amine oxidase, domain N
Clole_0641	SSF51556	Metallo-dependent hydrolases
Clole_0642	SSF50685	Barwin-like endoglucanases
Clole_0644	SSF158472	HAMP domain-like
Clole_0644	SSF47384	Homodimeric domain of signal transducing histidine kinase
Clole_0644	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Clole_0645	SSF46894	C-terminal effector domain of the bipartite response regulators
Clole_0645	SSF52172	CheY-like
Clole_0646	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_0646	SSF90123	ABC transporter transmembrane region
Clole_0647	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
Clole_0648	SSF53850	Periplasmic binding protein-like II
Clole_0649	SSF161098	MetI-like
Clole_0650	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_0651	SSF103190	Sensory domain-like
Clole_0651	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
Clole_0652	SSF55383	Copper amine oxidase, domain N
Clole_0653	SSF141986	LD-carboxypeptidase A C-terminal domain-like
Clole_0653	SSF52317	Class I glutamine amidotransferase-like
Clole_0654	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Clole_0655	SSF51161	Trimeric LpxA-like enzymes
Clole_0656	SSF88874	Receptor-binding domain of short tail fibre protein gp12
Clole_0657	SSF49785	Galactose-binding domain-like
Clole_0659	SSF53807	"Helical backbone" metal receptor
Clole_0660	SSF81345	ABC transporter involved in vitamin B12 uptake, BtuC
Clole_0661	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_0662	SSF51569	Aldolase
Clole_0663	SSF53850	Periplasmic binding protein-like II
Clole_0663	SSF55021	ACT-like
Clole_0664	SSF51905	FAD/NAD(P)-binding domain
Clole_0668	SSF49503	Cupredoxins
Clole_0670	SSF141571	Pentapeptide repeat-like
Clole_0671	SSF103473	MFS general substrate transporter
Clole_0673	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
Clole_0674	SSF46689	Homeodomain-like
Clole_0674	SSF51215	Regulatory protein AraC
Clole_0675	SSF48208	Six-hairpin glycosidases
Clole_0675	SSF49384	Carbohydrate-binding domain
Clole_0675	SSF49785	Galactose-binding domain-like
Clole_0675	SSF81296	E set domains
Clole_0676	SSF51445	(Trans)glycosidases
Clole_0676	SSF52279	Beta-D-glucan exohydrolase, C-terminal domain
Clole_0677	SSF46689	Homeodomain-like
Clole_0677	SSF51215	Regulatory protein AraC
Clole_0678	SSF53474	alpha/beta-Hydrolases
Clole_0679	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_0681	SSF52172	CheY-like
Clole_0682	SSF47384	Homodimeric domain of signal transducing histidine kinase
Clole_0682	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Clole_0683	SSF48208	Six-hairpin glycosidases
Clole_0683	SSF49384	Carbohydrate-binding domain
Clole_0684	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_0684	SSF56784	HAD-like
Clole_0686	SSF51126	Pectin lyase-like
Clole_0686	SSF55383	Copper amine oxidase, domain N
Clole_0687	SSF51735	NAD(P)-binding Rossmann-fold domains
Clole_0687	SSF53223	Aminoacid dehydrogenase-like, N-terminal domain
Clole_0688	SSF51126	Pectin lyase-like
Clole_0689	SSF47413	lambda repressor-like DNA-binding domains
Clole_0689	SSF53822	Periplasmic binding protein-like I
Clole_0690	SSF53850	Periplasmic binding protein-like II
Clole_0691	SSF160964	MalF N-terminal region-like
Clole_0691	SSF161098	MetI-like
Clole_0692	SSF161098	MetI-like
Clole_0693	SSF51445	(Trans)glycosidases
Clole_0694	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
Clole_0695	SSF49785	Galactose-binding domain-like
Clole_0695	SSF51445	(Trans)glycosidases
Clole_0699	SSF140478	LemA-like
Clole_0700	SSF47384	Homodimeric domain of signal transducing histidine kinase
Clole_0700	SSF55785	PYP-like sensor domain (PAS domain)
Clole_0700	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Clole_0701	SSF56322	ADC synthase
Clole_0702	SSF52317	Class I glutamine amidotransferase-like
Clole_0703	SSF47648	Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain
Clole_0703	SSF52418	Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain
Clole_0704	SSF51366	Ribulose-phoshate binding barrel
Clole_0705	SSF51366	Ribulose-phoshate binding barrel
Clole_0706	SSF53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes
Clole_0707	SSF51366	Ribulose-phoshate binding barrel
Clole_0708	SSF53474	alpha/beta-Hydrolases
Clole_0709	SSF48208	Six-hairpin glycosidases
Clole_0709	SSF49384	Carbohydrate-binding domain
Clole_0710	SSF55383	Copper amine oxidase, domain N
Clole_0711	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Clole_0712	SSF52833	Thioredoxin-like
Clole_0714	SSF53795	PEP carboxykinase-like
Clole_0715	SSF56349	DNA breaking-rejoining enzymes
Clole_0717	SSF52113	BRCT domain
Clole_0717	SSF53098	Ribonuclease H-like
Clole_0718	SSF47413	lambda repressor-like DNA-binding domains
Clole_0729	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_0730	SSF109709	KorB DNA-binding domain-like
Clole_0730	SSF110849	ParB/Sulfiredoxin
Clole_0732	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Clole_0737	SSF88697	PUA domain-like
Clole_0744	SSF56563	Major capsid protein gp5
Clole_0752	SSF48371	ARM repeat
Clole_0760	SSF55846	N-acetylmuramoyl-L-alanine amidase-like
Clole_0763	SSF47413	lambda repressor-like DNA-binding domains
Clole_0763	SSF53822	Periplasmic binding protein-like I
Clole_0764	SSF51011	Glycosyl hydrolase domain
Clole_0764	SSF51445	(Trans)glycosidases
Clole_0765	SSF55604	Glucose permease domain IIB
Clole_0766	SSF56219	DNase I-like
Clole_0769	SSF117457	FumA C-terminal domain-like
Clole_0770	SSF52096	ClpP/crotonase
Clole_0771	SSF56801	Acetyl-CoA synthetase-like
Clole_0772	SSF56801	Acetyl-CoA synthetase-like
Clole_0773	SSF55021	ACT-like
Clole_0774	SSF81593	Nucleotidyltransferase substrate binding subunit/domain
Clole_0777	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
Clole_0778	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
Clole_0779	SSF53720	ALDH-like
Clole_0779	SSF56796	Dehydroquinate synthase-like
Clole_0780	SSF56349	DNA breaking-rejoining enzymes
Clole_0782	SSF47413	lambda repressor-like DNA-binding domains
Clole_0783	SSF46955	Putative DNA-binding domain
Clole_0795	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_0799	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_0800	SSF103084	Holliday junction resolvase RusA
Clole_0805	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Clole_0810	SSF159006	YopX-like
Clole_0811	SSF56349	DNA breaking-rejoining enzymes
Clole_0830	SSF48371	ARM repeat
Clole_0841	SSF55846	N-acetylmuramoyl-L-alanine amidase-like
Clole_0842	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_0846	SSF53474	alpha/beta-Hydrolases
Clole_0847	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
Clole_0848	SSF64518	Phase 1 flagellin
Clole_0849	SSF46589	tRNA-binding arm
Clole_0849	SSF55681	Class II aaRS and biotin synthetases
Clole_0850	SSF56672	DNA/RNA polymerases
Clole_0854	SSF111352	Ammonium transporter
Clole_0854	SSF54913	GlnB-like
Clole_0855	SSF56601	beta-lactamase/transpeptidase-like
Clole_0856	SSF46689	Homeodomain-like
Clole_0861	SSF56349	DNA breaking-rejoining enzymes
Clole_0862	SSF47413	lambda repressor-like DNA-binding domains
Clole_0863	SSF47413	lambda repressor-like DNA-binding domains
Clole_0867	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_0873	SSF48371	ARM repeat
Clole_0877	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
Clole_0877	SSF88946	Sigma2 domain of RNA polymerase sigma factors
Clole_0878	SSF46689	Homeodomain-like
Clole_0880	SSF161098	MetI-like
Clole_0881	SSF161098	MetI-like
Clole_0882	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_0883	SSF53850	Periplasmic binding protein-like II
Clole_0888	SSF88713	Glycoside hydrolase/deacetylase
Clole_0890	SSF51695	PLC-like phosphodiesterases
Clole_0893	SSF143631	ApbE-like
Clole_0894	SSF51905	FAD/NAD(P)-binding domain
Clole_0897	SSF48576	Terpenoid synthases
Clole_0900	SSF56784	HAD-like
Clole_0902	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
Clole_0902	SSF88946	Sigma2 domain of RNA polymerase sigma factors
Clole_0905	SSF46785	"Winged helix" DNA-binding domain
Clole_0905	SSF53383	PLP-dependent transferases
Clole_0906	SSF52172	CheY-like
Clole_0907	SSF51998	PFL-like glycyl radical enzymes
Clole_0908	SSF48371	ARM repeat
Clole_0908	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Clole_0913	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_0915	SSF53822	Periplasmic binding protein-like I
Clole_0918	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_0919	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_0920	SSF46955	Putative DNA-binding domain
Clole_0921	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_0922	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_0924	SSF52218	Flavoproteins
Clole_0925	SSF50249	Nucleic acid-binding proteins
Clole_0926	SSF56349	DNA breaking-rejoining enzymes
Clole_0928	SSF47413	lambda repressor-like DNA-binding domains
Clole_0929	SSF47413	lambda repressor-like DNA-binding domains
Clole_0936	SSF54060	His-Me finger endonucleases
Clole_0943	SSF52980	Restriction endonuclease-like
Clole_0945	SSF50249	Nucleic acid-binding proteins
Clole_0947	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_0955	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Clole_0962	SSF102114	Radical SAM enzymes
Clole_0964	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
Clole_0965	SSF46689	Homeodomain-like
Clole_0966	SSF118010	TM1457-like
Clole_0972	SSF56563	Major capsid protein gp5
Clole_0990	SSF55846	N-acetylmuramoyl-L-alanine amidase-like
Clole_0992	SSF109604	HD-domain/PDEase-like
Clole_0993	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
Clole_0996	SSF52980	Restriction endonuclease-like
Clole_0998	SSF46785	"Winged helix" DNA-binding domain
Clole_0998	SSF51206	cAMP-binding domain-like
Clole_1003	SSF55931	Glutamine synthetase/guanido kinase
Clole_1003	SSF56059	Glutathione synthetase ATP-binding domain-like
Clole_1004	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
Clole_1004	SSF52922	TK C-terminal domain-like
Clole_1004	SSF53323	Pyruvate-ferredoxin oxidoreductase, PFOR, domain III
Clole_1004	SSF54862	4Fe-4S ferredoxins
Clole_1005	SSF51658	Xylose isomerase-like
Clole_1006	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
Clole_1006	SSF52922	TK C-terminal domain-like
Clole_1006	SSF53323	Pyruvate-ferredoxin oxidoreductase, PFOR, domain III
Clole_1006	SSF54862	4Fe-4S ferredoxins
Clole_1007	SSF56219	DNase I-like
Clole_1008	SSF50447	Translation proteins
Clole_1008	SSF55186	ThrRS/AlaRS common domain
Clole_1009	SSF48208	Six-hairpin glycosidases
Clole_1010	SSF161098	MetI-like
Clole_1011	SSF161098	MetI-like
Clole_1012	SSF53850	Periplasmic binding protein-like II
Clole_1013	SSF117125	Putative glucosidase YicI, C-terminal domain
Clole_1013	SSF51011	Glycosyl hydrolase domain
Clole_1013	SSF51445	(Trans)glycosidases
Clole_1013	SSF74650	Galactose mutarotase-like
Clole_1014	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Clole_1015	SSF46689	Homeodomain-like
Clole_1015	SSF52172	CheY-like
Clole_1017	SSF54862	4Fe-4S ferredoxins
Clole_1018	SSF47240	Ferritin-like
Clole_1019	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_1020	SSF53098	Ribonuclease H-like
Clole_1021	SSF50800	PK beta-barrel domain-like
Clole_1021	SSF51621	Phosphoenolpyruvate/pyruvate domain
Clole_1021	SSF52009	Phosphohistidine domain
Clole_1021	SSF52935	PK C-terminal domain-like
Clole_1026	SSF53927	Cytidine deaminase-like
Clole_1028	SSF46689	Homeodomain-like
Clole_1030	SSF48019	post-AAA+ oligomerization domain-like
Clole_1030	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_1031	SSF82607	YbaB-like
Clole_1032	SSF111304	Recombination protein RecR
Clole_1033	SSF103190	Sensory domain-like
Clole_1033	SSF141868	EAL domain-like
Clole_1033	SSF158472	HAMP domain-like
Clole_1033	SSF55073	Nucleotide cyclase
Clole_1033	SSF55785	PYP-like sensor domain (PAS domain)
Clole_1035	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_1040	SSF101116	Flagellar export chaperone FliS
Clole_1041	SSF64518	Phase 1 flagellin
Clole_1045	SSF52218	Flavoproteins
Clole_1045	SSF55718	SCP-like
Clole_1046	SSF54197	HIT-like
Clole_1047	SSF52402	Adenine nucleotide alpha hydrolases-like
Clole_1047	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
Clole_1048	SSF51735	NAD(P)-binding Rossmann-fold domains
Clole_1048	SSF53223	Aminoacid dehydrogenase-like, N-terminal domain
Clole_1049	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
Clole_1050	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
Clole_1051	SSF52317	Class I glutamine amidotransferase-like
Clole_1051	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_1054	SSF46785	"Winged helix" DNA-binding domain
Clole_1056	SSF55008	HMA, heavy metal-associated domain
Clole_1057	SSF53167	Purine and uridine phosphorylases
Clole_1062	SSF53697	SIS domain
Clole_1063	SSF46785	"Winged helix" DNA-binding domain
Clole_1063	SSF75500	Putative transcriptional regulator TM1602, C-terminal domain
Clole_1065	SSF53163	HybD-like
Clole_1066	SSF54106	LysM domain
Clole_1067	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
Clole_1068	SSF82171	DPP6 N-terminal domain-like
Clole_1071	SSF54995	Ribosomal protein S6
Clole_1072	SSF50249	Nucleic acid-binding proteins
Clole_1073	SSF46911	Ribosomal protein S18
Clole_1075	SSF64182	DHH phosphoesterases
Clole_1076	SSF55653	Ribosomal protein L9 C-domain
Clole_1076	SSF55658	L9 N-domain-like
Clole_1077	SSF48024	N-terminal domain of DnaB helicase
Clole_1077	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_1078	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Clole_1079	SSF46955	Putative DNA-binding domain
Clole_1080	SSF102114	Radical SAM enzymes
Clole_1081	SSF51998	PFL-like glycyl radical enzymes
Clole_1084	SSF140683	SP0561-like
Clole_1085	SSF54631	CBS-domain pair
Clole_1085	SSF64182	DHH phosphoesterases
Clole_1085	SSF75138	HprK N-terminal domain-like
Clole_1086	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_1089	SSF51445	(Trans)glycosidases
Clole_1090	SSF53474	alpha/beta-Hydrolases
Clole_1091	SSF53187	Zn-dependent exopeptidases
Clole_1092	SSF46785	"Winged helix" DNA-binding domain
Clole_1092	SSF53383	PLP-dependent transferases
Clole_1093	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_1094	SSF158499	DnaD domain-like
Clole_1095	SSF51984	MurCD N-terminal domain
Clole_1095	SSF53244	MurD-like peptide ligases, peptide-binding domain
Clole_1095	SSF53623	MurD-like peptide ligases, catalytic domain
Clole_1096	SSF46785	"Winged helix" DNA-binding domain
Clole_1096	SSF53271	PRTase-like
Clole_1097	SSF51161	Trimeric LpxA-like enzymes
Clole_1097	SSF53448	Nucleotide-diphospho-sugar transferases
Clole_1098	SSF51161	Trimeric LpxA-like enzymes
Clole_1098	SSF53448	Nucleotide-diphospho-sugar transferases
Clole_1099	SSF160537	SpoVG-like
Clole_1100	SSF51161	Trimeric LpxA-like enzymes
Clole_1100	SSF53448	Nucleotide-diphospho-sugar transferases
Clole_1101	SSF53271	PRTase-like
Clole_1102	SSF49785	Galactose-binding domain-like
Clole_1102	SSF51445	(Trans)glycosidases
Clole_1103	SSF53178	Peptidyl-tRNA hydrolase-like
Clole_1104	SSF141259	CarD-like
Clole_1104	SSF143517	TRCF domain-like
Clole_1104	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_1105	SSF109998	Triger factor/SurA peptide-binding domain-like
Clole_1105	SSF54534	FKBP-like
Clole_1106	SSF89447	AbrB/MazE/MraZ-like
Clole_1107	SSF101386	all-alpha NTP pyrophosphatases
Clole_1108	SSF47729	IHF-like DNA-binding proteins
Clole_1109	SSF55174	Alpha-L RNA-binding motif
Clole_1113	SSF75620	Release factor
Clole_1114	SSF50341	CheW-like
Clole_1115	SSF52972	ITPase-like
Clole_1116	SSF56300	Metallo-dependent phosphatases
Clole_1117	SSF55154	CYTH-like phosphatases
Clole_1118	SSF48452	TPR-like
Clole_1118	SSF53448	Nucleotide-diphospho-sugar transferases
Clole_1119	SSF48452	TPR-like
Clole_1119	SSF53448	Nucleotide-diphospho-sugar transferases
Clole_1121	SSF52317	Class I glutamine amidotransferase-like
Clole_1123	SSF102735	Trigger factor ribosome-binding domain
Clole_1123	SSF109998	Triger factor/SurA peptide-binding domain-like
Clole_1123	SSF54534	FKBP-like
Clole_1124	SSF52096	ClpP/crotonase
Clole_1125	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_1125	SSF57716	Glucocorticoid receptor-like (DNA-binding domain)
Clole_1126	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_1126	SSF54211	Ribosomal protein S5 domain 2-like
Clole_1127	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_1127	SSF54211	Ribosomal protein S5 domain 2-like
Clole_1127	SSF88697	PUA domain-like
Clole_1128	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_1130	SSF46785	"Winged helix" DNA-binding domain
Clole_1131	SSF102114	Radical SAM enzymes
Clole_1133	SSF46894	C-terminal effector domain of the bipartite response regulators
Clole_1133	SSF52172	CheY-like
Clole_1134	SSF47384	Homodimeric domain of signal transducing histidine kinase
Clole_1134	SSF55785	PYP-like sensor domain (PAS domain)
Clole_1134	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Clole_1135	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Clole_1136	SSF53850	Periplasmic binding protein-like II
Clole_1137	SSF53850	Periplasmic binding protein-like II
Clole_1138	SSF161098	MetI-like
Clole_1139	SSF161098	MetI-like
Clole_1140	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_1141	SSF109755	PhoU-like
Clole_1142	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_1143	SSF53098	Ribonuclease H-like
Clole_1144	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
Clole_1146	SSF51569	Aldolase
Clole_1147	SSF50341	CheW-like
Clole_1147	SSF52172	CheY-like
Clole_1148	SSF52954	Class II aaRS ABD-related
Clole_1148	SSF55681	Class II aaRS and biotin synthetases
Clole_1149	SSF50249	Nucleic acid-binding proteins
Clole_1149	SSF55261	GAD domain-like
Clole_1149	SSF55681	Class II aaRS and biotin synthetases
Clole_1150	SSF51011	Glycosyl hydrolase domain
Clole_1150	SSF51445	(Trans)glycosidases
Clole_1151	SSF51430	NAD(P)-linked oxidoreductase
Clole_1156	SSF46689	Homeodomain-like
Clole_1157	SSF52374	Nucleotidylyl transferase
Clole_1158	SSF51366	Ribulose-phoshate binding barrel
Clole_1160	SSF54506	Diaminopimelate epimerase-like
Clole_1161	SSF52440	PreATP-grasp domain
Clole_1161	SSF56059	Glutathione synthetase ATP-binding domain-like
Clole_1163	SSF46689	Homeodomain-like
Clole_1164	SSF81345	ABC transporter involved in vitamin B12 uptake, BtuC
Clole_1165	SSF81345	ABC transporter involved in vitamin B12 uptake, BtuC
Clole_1166	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_1167	SSF53807	"Helical backbone" metal receptor
Clole_1168	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
Clole_1170	SSF51445	(Trans)glycosidases
Clole_1171	SSF56349	DNA breaking-rejoining enzymes
Clole_1183	SSF47413	lambda repressor-like DNA-binding domains
Clole_1194	SSF140683	SP0561-like
Clole_1194	SSF56821	Prismane protein-like
Clole_1195	SSF46785	"Winged helix" DNA-binding domain
Clole_1195	SSF51206	cAMP-binding domain-like
Clole_1196	SSF53187	Zn-dependent exopeptidases
Clole_1196	SSF55383	Copper amine oxidase, domain N
Clole_1197	SSF52821	Rhodanese/Cell cycle control phosphatase
Clole_1198	SSF51905	FAD/NAD(P)-binding domain
Clole_1198	SSF52821	Rhodanese/Cell cycle control phosphatase
Clole_1198	SSF55424	FAD/NAD-linked reductases, dimerisation (C-terminal) domain
Clole_1199	SSF55383	Copper amine oxidase, domain N
Clole_1200	SSF51261	Duplicated hybrid motif
Clole_1200	SSF55604	Glucose permease domain IIB
Clole_1201	SSF51182	RmlC-like cupins
Clole_1202	SSF56784	HAD-like
Clole_1202	SSF81653	Calcium ATPase, transduction domain A
Clole_1202	SSF81660	Metal cation-transporting ATPase, ATP-binding domain N
Clole_1202	SSF81665	Calcium ATPase, transmembrane domain M
Clole_1205	SSF69318	Integrin alpha N-terminal domain
Clole_1206	SSF51735	NAD(P)-binding Rossmann-fold domains
Clole_1206	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
Clole_1209	SSF81301	Nucleotidyltransferase
Clole_1211	SSF56059	Glutathione synthetase ATP-binding domain-like
Clole_1212	SSF56059	Glutathione synthetase ATP-binding domain-like
Clole_1213	SSF56059	Glutathione synthetase ATP-binding domain-like
Clole_1214	SSF51556	Metallo-dependent hydrolases
Clole_1215	SSF47413	lambda repressor-like DNA-binding domains
Clole_1215	SSF53822	Periplasmic binding protein-like I
Clole_1216	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
Clole_1216	SSF51735	NAD(P)-binding Rossmann-fold domains
Clole_1218	SSF51735	NAD(P)-binding Rossmann-fold domains
Clole_1219	SSF51182	RmlC-like cupins
Clole_1220	SSF51658	Xylose isomerase-like
Clole_1221	SSF51126	Pectin lyase-like
Clole_1222	SSF53850	Periplasmic binding protein-like II
Clole_1223	SSF53850	Periplasmic binding protein-like II
Clole_1224	SSF160964	MalF N-terminal region-like
Clole_1224	SSF161098	MetI-like
Clole_1225	SSF161098	MetI-like
Clole_1226	SSF51126	Pectin lyase-like
Clole_1227	SSF46689	Homeodomain-like
Clole_1227	SSF51182	RmlC-like cupins
Clole_1231	SSF52172	CheY-like
Clole_1232	SSF51621	Phosphoenolpyruvate/pyruvate domain
Clole_1233	SSF53271	PRTase-like
Clole_1235	SSF56784	HAD-like
Clole_1236	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_1237	SSF53850	Periplasmic binding protein-like II
Clole_1238	SSF161098	MetI-like
Clole_1239	SSF161098	MetI-like
Clole_1240	SSF52218	Flavoproteins
Clole_1240	SSF54862	4Fe-4S ferredoxins
Clole_1243	SSF52743	Subtilisin-like
Clole_1244	SSF47384	Homodimeric domain of signal transducing histidine kinase
Clole_1244	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Clole_1245	SSF46894	C-terminal effector domain of the bipartite response regulators
Clole_1245	SSF52172	CheY-like
Clole_1248	SSF50494	Trypsin-like serine proteases
Clole_1249	SSF55826	YbaK/ProRS associated domain
Clole_1250	SSF56219	DNase I-like
Clole_1251	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
Clole_1252	SSF53098	Ribonuclease H-like
Clole_1253	SSF53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes
Clole_1253	SSF55021	ACT-like
Clole_1254	SSF64182	DHH phosphoesterases
Clole_1255	SSF46785	"Winged helix" DNA-binding domain
Clole_1261	SSF82549	DAK1/DegV-like
Clole_1264	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_1266	SSF54001	Cysteine proteinases
Clole_1267	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
Clole_1267	SSF52922	TK C-terminal domain-like
Clole_1267	SSF54862	4Fe-4S ferredoxins
Clole_1268	SSF53323	Pyruvate-ferredoxin oxidoreductase, PFOR, domain III
Clole_1269	SSF53383	PLP-dependent transferases
Clole_1271	SSF50447	Translation proteins
Clole_1271	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_1271	SSF54211	Ribosomal protein S5 domain 2-like
Clole_1271	SSF54980	EF-G C-terminal domain-like
Clole_1272	SSF46785	"Winged helix" DNA-binding domain
Clole_1273	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_1276	SSF53955	Lysozyme-like
Clole_1276	SSF56601	beta-lactamase/transpeptidase-like
Clole_1278	SSF46785	"Winged helix" DNA-binding domain
Clole_1279	SSF51735	NAD(P)-binding Rossmann-fold domains
Clole_1280	SSF52833	Thioredoxin-like
Clole_1281	SSF75005	Arabinanase/levansucrase/invertase
Clole_1284	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_1285	SSF46785	"Winged helix" DNA-binding domain
Clole_1288	SSF56796	Dehydroquinate synthase-like
Clole_1289	SSF55811	Nudix
Clole_1291	SSF51338	Composite domain of metallo-dependent hydrolases
Clole_1291	SSF51556	Metallo-dependent hydrolases
Clole_1296	SSF140931	Fic-like
Clole_1297	SSF52980	Restriction endonuclease-like
Clole_1298	SSF158791	MgtE N-terminal domain-like
Clole_1298	SSF161093	MgtE membrane domain-like
Clole_1298	SSF54631	CBS-domain pair
Clole_1299	SSF53850	Periplasmic binding protein-like II
Clole_1300	SSF161098	MetI-like
Clole_1301	SSF161098	MetI-like
Clole_1302	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_1303	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_1304	SSF52317	Class I glutamine amidotransferase-like
Clole_1305	SSF102114	Radical SAM enzymes
Clole_1306	SSF102114	Radical SAM enzymes
Clole_1307	SSF102114	Radical SAM enzymes
Clole_1310	SSF102114	Radical SAM enzymes
Clole_1311	SSF102114	Radical SAM enzymes
Clole_1313	SSF46785	"Winged helix" DNA-binding domain
Clole_1316	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
Clole_1316	SSF50677	ValRS/IleRS/LeuRS editing domain
Clole_1316	SSF52374	Nucleotidylyl transferase
Clole_1317	SSF53613	Ribokinase-like
Clole_1318	SSF110710	TTHA0583/YokD-like
Clole_1325	SSF51569	Aldolase
Clole_1326	SSF53659	Isocitrate/Isopropylmalate dehydrogenase-like
Clole_1328	SSF46689	Homeodomain-like
Clole_1329	SSF51445	(Trans)glycosidases
Clole_1330	SSF103473	MFS general substrate transporter
Clole_1331	SSF56300	Metallo-dependent phosphatases
Clole_1333	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_1334	SSF50715	Ribosomal protein L25-like
Clole_1334	SSF52374	Nucleotidylyl transferase
Clole_1335	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_1338	SSF53254	Phosphoglycerate mutase-like
Clole_1339	SSF53822	Periplasmic binding protein-like I
Clole_1340	SSF158472	HAMP domain-like
Clole_1340	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Clole_1341	SSF46689	Homeodomain-like
Clole_1341	SSF52172	CheY-like
Clole_1342	SSF53822	Periplasmic binding protein-like I
Clole_1343	SSF53822	Periplasmic binding protein-like I
Clole_1344	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_1346	SSF64182	DHH phosphoesterases
Clole_1347	SSF51161	Trimeric LpxA-like enzymes
Clole_1348	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
Clole_1348	SSF52374	Nucleotidylyl transferase
Clole_1349	SSF69065	RNase III domain-like
Clole_1350	SSF55315	L30e-like
Clole_1350	SSF75217	alpha/beta knot
Clole_1351	SSF56988	Anthrax protective antigen
Clole_1352	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
Clole_1352	SSF88946	Sigma2 domain of RNA polymerase sigma factors
Clole_1355	SSF53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes
Clole_1356	SSF103642	Sec-C motif
Clole_1359	SSF103486	V-type ATP synthase subunit C
Clole_1361	SSF81333	F1F0 ATP synthase subunit C
Clole_1362	SSF159468	AtpF-like
Clole_1363	SSF160527	V-type ATPase subunit E-like
Clole_1364	SSF47917	C-terminal domain of alpha and beta subunits of F1 ATP synthase
Clole_1364	SSF50615	N-terminal domain of alpha and beta subunits of F1 ATP synthase
Clole_1364	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_1365	SSF47917	C-terminal domain of alpha and beta subunits of F1 ATP synthase
Clole_1365	SSF50615	N-terminal domain of alpha and beta subunits of F1 ATP synthase
Clole_1365	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_1367	SSF109604	HD-domain/PDEase-like
Clole_1369	SSF46785	"Winged helix" DNA-binding domain
Clole_1375	SSF48208	Six-hairpin glycosidases
Clole_1376	SSF48452	TPR-like
Clole_1376	SSF55073	Nucleotide cyclase
Clole_1376	SSF55781	GAF domain-like
Clole_1379	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_1383	SSF52768	Arginase/deacetylase
Clole_1384	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Clole_1385	SSF56276	S-adenosylmethionine decarboxylase
Clole_1386	SSF53613	Ribokinase-like
Clole_1389	SSF46767	Methylated DNA-protein cysteine methyltransferase, C-terminal domain
Clole_1389	SSF53155	Methylated DNA-protein cysteine methyltransferase domain
Clole_1390	SSF56300	Metallo-dependent phosphatases
Clole_1391	SSF56266	DmpA/ArgJ-like
Clole_1392	SSF53633	Carbamate kinase-like
Clole_1393	SSF53383	PLP-dependent transferases
Clole_1395	SSF53187	Zn-dependent exopeptidases
Clole_1397	SSF53850	Periplasmic binding protein-like II
Clole_1398	SSF161098	MetI-like
Clole_1399	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_1400	SSF53448	Nucleotide-diphospho-sugar transferases
Clole_1401	SSF48163	An anticodon-binding domain of class I aminoacyl-tRNA synthetases
Clole_1401	SSF52374	Nucleotidylyl transferase
Clole_1403	SSF48371	ARM repeat
Clole_1404	SSF56349	DNA breaking-rejoining enzymes
Clole_1405	SSF47413	lambda repressor-like DNA-binding domains
Clole_1406	SSF47413	lambda repressor-like DNA-binding domains
Clole_1408	SSF56731	DNA primase core
Clole_1411	SSF53041	Resolvase-like
Clole_1412	SSF46689	Homeodomain-like
Clole_1412	SSF53098	Ribonuclease H-like
Clole_1413	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_1416	SSF88697	PUA domain-like
Clole_1422	SSF53474	alpha/beta-Hydrolases
Clole_1427	SSF56784	HAD-like
Clole_1431	SSF53167	Purine and uridine phosphorylases
Clole_1432	SSF55073	Nucleotide cyclase
Clole_1432	SSF55781	GAF domain-like
Clole_1433	SSF48452	TPR-like
Clole_1434	SSF48317	Acid phosphatase/Vanadium-dependent haloperoxidase
Clole_1437	SSF46785	"Winged helix" DNA-binding domain
Clole_1437	SSF48008	GntR ligand-binding domain-like
Clole_1438	SSF140990	FtsH protease domain-like
Clole_1438	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_1439	SSF46955	Putative DNA-binding domain
Clole_1440	SSF46894	C-terminal effector domain of the bipartite response regulators
Clole_1440	SSF52172	CheY-like
Clole_1441	SSF47384	Homodimeric domain of signal transducing histidine kinase
Clole_1441	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Clole_1444	SSF144052	Thermophilic metalloprotease-like
Clole_1445	SSF117892	Band 7/SPFH domain
Clole_1445	SSF161187	YfgJ-like
Clole_1446	SSF51735	NAD(P)-binding Rossmann-fold domains
Clole_1446	SSF52283	Formate/glycerate dehydrogenase catalytic domain-like
Clole_1447	SSF161098	MetI-like
Clole_1448	SSF161098	MetI-like
Clole_1449	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_1450	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_1451	SSF53850	Periplasmic binding protein-like II
Clole_1453	SSF51569	Aldolase
Clole_1455	SSF48452	TPR-like
Clole_1457	SSF56059	Glutathione synthetase ATP-binding domain-like
Clole_1458	SSF53383	PLP-dependent transferases
Clole_1459	SSF46785	"Winged helix" DNA-binding domain
Clole_1461	SSF48452	TPR-like
Clole_1462	SSF52091	SpoIIaa-like
Clole_1463	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Clole_1464	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
Clole_1464	SSF88946	Sigma2 domain of RNA polymerase sigma factors
Clole_1465	SSF52317	Class I glutamine amidotransferase-like
Clole_1465	SSF55326	PurM N-terminal domain-like
Clole_1465	SSF56042	PurM C-terminal domain-like
Clole_1466	SSF52255	N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE)
Clole_1467	SSF56104	SAICAR synthase-like
Clole_1468	SSF53271	PRTase-like
Clole_1468	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
Clole_1469	SSF55326	PurM N-terminal domain-like
Clole_1469	SSF56042	PurM C-terminal domain-like
Clole_1470	SSF53328	Formyltransferase
Clole_1471	SSF51246	Rudiment single hybrid motif
Clole_1471	SSF52440	PreATP-grasp domain
Clole_1471	SSF56059	Glutathione synthetase ATP-binding domain-like
Clole_1472	SSF56349	DNA breaking-rejoining enzymes
Clole_1473	SSF47413	lambda repressor-like DNA-binding domains
Clole_1474	SSF47413	lambda repressor-like DNA-binding domains
Clole_1480	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_1483	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
Clole_1495	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Clole_1499	SSF55136	Probable bacterial effector-binding domain
Clole_1501	SSF47413	lambda repressor-like DNA-binding domains
Clole_1504	SSF54001	Cysteine proteinases
Clole_1505	SSF46785	"Winged helix" DNA-binding domain
Clole_1505	SSF53383	PLP-dependent transferases
Clole_1506	SSF53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes
Clole_1507	SSF51161	Trimeric LpxA-like enzymes
Clole_1510	SSF50447	Translation proteins
Clole_1510	SSF55186	ThrRS/AlaRS common domain
Clole_1511	SSF52440	PreATP-grasp domain
Clole_1511	SSF56059	Glutathione synthetase ATP-binding domain-like
Clole_1512	SSF55166	Hedgehog/DD-peptidase
Clole_1514	SSF50621	Alanine racemase C-terminal domain-like
Clole_1514	SSF51419	PLP-binding barrel
Clole_1515	SSF143602	STIV B116-like
Clole_1517	SSF48439	Protein prenylyltransferase
Clole_1518	SSF48452	TPR-like
Clole_1521	SSF46548	alpha-helical ferredoxin
Clole_1521	SSF51430	NAD(P)-linked oxidoreductase
Clole_1523	SSF53927	Cytidine deaminase-like
Clole_1526	SSF111352	Ammonium transporter
Clole_1527	SSF54913	GlnB-like
Clole_1528	SSF103190	Sensory domain-like
Clole_1528	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
Clole_1529	SSF46689	Homeodomain-like
Clole_1533	SSF117892	Band 7/SPFH domain
Clole_1534	SSF47598	Ribbon-helix-helix
Clole_1536	SSF46785	"Winged helix" DNA-binding domain
Clole_1537	SSF53955	Lysozyme-like
Clole_1538	SSF51445	(Trans)glycosidases
Clole_1539	SSF51430	NAD(P)-linked oxidoreductase
Clole_1540	SSF52499	Isochorismatase-like hydrolases
Clole_1541	SSF53271	PRTase-like
Clole_1542	SSF51690	Nicotinate/Quinolinate PRTase C-terminal domain-like
Clole_1543	SSF52402	Adenine nucleotide alpha hydrolases-like
Clole_1543	SSF56317	Carbon-nitrogen hydrolase
Clole_1544	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
Clole_1544	SSF51735	NAD(P)-binding Rossmann-fold domains
Clole_1547	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_1548	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Clole_1549	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Clole_1550	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Clole_1551	SSF53383	PLP-dependent transferases
Clole_1551	SSF55904	Ornithine decarboxylase C-terminal domain
Clole_1552	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Clole_1553	SSF51735	NAD(P)-binding Rossmann-fold domains
Clole_1554	SSF50621	Alanine racemase C-terminal domain-like
Clole_1554	SSF51419	PLP-binding barrel
Clole_1555	SSF51126	Pectin lyase-like
Clole_1556	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_1557	SSF81324	Voltage-gated potassium channels
Clole_1558	SSF160240	Cation efflux protein cytoplasmic domain-like
Clole_1558	SSF161111	Cation efflux protein transmembrane domain-like
Clole_1559	SSF64182	DHH phosphoesterases
Clole_1560	SSF103642	Sec-C motif
Clole_1560	SSF55920	Creatinase/aminopeptidase
Clole_1562	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_1563	SSF56317	Carbon-nitrogen hydrolase
Clole_1564	SSF88713	Glycoside hydrolase/deacetylase
Clole_1566	SSF51412	Inosine monophosphate dehydrogenase (IMPDH)
Clole_1567	SSF52172	CheY-like
Clole_1568	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Clole_1569	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_1571	SSF53271	PRTase-like
Clole_1571	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
Clole_1572	SSF46689	Homeodomain-like
Clole_1572	SSF51215	Regulatory protein AraC
Clole_1573	SSF53244	MurD-like peptide ligases, peptide-binding domain
Clole_1573	SSF53623	MurD-like peptide ligases, catalytic domain
Clole_1573	SSF63418	MurE/MurF N-terminal domain
Clole_1574	SSF52266	SGNH hydrolase
Clole_1575	SSF46785	"Winged helix" DNA-binding domain
Clole_1575	SSF55811	Nudix
Clole_1576	SSF52833	Thioredoxin-like
Clole_1577	SSF140490	Nqo1C-terminal domain-like
Clole_1577	SSF142019	Nqo1 FMN-binding domain-like
Clole_1577	SSF142984	Nqo1 middle domain-like
Clole_1577	SSF52833	Thioredoxin-like
Clole_1577	SSF54862	4Fe-4S ferredoxins
Clole_1578	SSF53920	Fe-only hydrogenase
Clole_1578	SSF54292	2Fe-2S ferredoxin-like
Clole_1578	SSF54862	4Fe-4S ferredoxins
Clole_1579	SSF52833	Thioredoxin-like
Clole_1580	SSF51261	Duplicated hybrid motif
Clole_1580	SSF54106	LysM domain
Clole_1581	SSF109604	HD-domain/PDEase-like
Clole_1583	SSF56784	HAD-like
Clole_1584	SSF53187	Zn-dependent exopeptidases
Clole_1584	SSF55383	Copper amine oxidase, domain N
Clole_1587	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_1588	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_1588	SSF55021	ACT-like
Clole_1589	SSF161098	MetI-like
Clole_1590	SSF53850	Periplasmic binding protein-like II
Clole_1591	SSF142754	NadA-like
Clole_1592	SSF51905	FAD/NAD(P)-binding domain
Clole_1592	SSF56425	Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain
Clole_1593	SSF51690	Nicotinate/Quinolinate PRTase C-terminal domain-like
Clole_1593	SSF54675	Nicotinate/Quinolinate PRTase N-terminal domain-like
Clole_1596	SSF109998	Triger factor/SurA peptide-binding domain-like
Clole_1596	SSF54534	FKBP-like
Clole_1597	SSF55811	Nudix
Clole_1600	SSF102114	Radical SAM enzymes
Clole_1601	SSF109604	HD-domain/PDEase-like
Clole_1602	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
Clole_1602	SSF51735	NAD(P)-binding Rossmann-fold domains
Clole_1605	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_1606	SSF53822	Periplasmic binding protein-like I
Clole_1607	SSF53822	Periplasmic binding protein-like I
Clole_1608	SSF53187	Zn-dependent exopeptidases
Clole_1608	SSF55383	Copper amine oxidase, domain N
Clole_1609	SSF55021	ACT-like
Clole_1610	SSF51735	NAD(P)-binding Rossmann-fold domains
Clole_1610	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
Clole_1611	SSF53649	Alkaline phosphatase-like
Clole_1612	SSF53633	Carbamate kinase-like
Clole_1612	SSF55021	ACT-like
Clole_1613	SSF54211	Ribosomal protein S5 domain 2-like
Clole_1613	SSF55060	GHMP Kinase, C-terminal domain
Clole_1614	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Clole_1615	SSF47384	Homodimeric domain of signal transducing histidine kinase
Clole_1616	SSF158832	Tex N-terminal region-like
Clole_1616	SSF47781	RuvA domain 2-like
Clole_1616	SSF50249	Nucleic acid-binding proteins
Clole_1616	SSF53098	Ribonuclease H-like
Clole_1618	SSF53098	Ribonuclease H-like
Clole_1619	SSF46689	Homeodomain-like
Clole_1619	SSF48295	TrpR-like
Clole_1620	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_1621	SSF53067	Actin-like ATPase domain
Clole_1622	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Clole_1623	SSF49299	PKD domain
Clole_1623	SSF55383	Copper amine oxidase, domain N
Clole_1624	SSF54211	Ribosomal protein S5 domain 2-like
Clole_1625	SSF141868	EAL domain-like
Clole_1625	SSF55073	Nucleotide cyclase
Clole_1625	SSF55785	PYP-like sensor domain (PAS domain)
Clole_1626	SSF50249	Nucleic acid-binding proteins
Clole_1626	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_1627	SSF143800	L28p-like
Clole_1629	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Clole_1630	SSF75620	Release factor
Clole_1631	SSF49384	Carbohydrate-binding domain
Clole_1631	SSF49785	Galactose-binding domain-like
Clole_1631	SSF51445	(Trans)glycosidases
Clole_1632	SSF54631	CBS-domain pair
Clole_1632	SSF56176	FAD-binding/transporter-associated domain-like
Clole_1633	SSF102114	Radical SAM enzymes
Clole_1635	SSF82549	DAK1/DegV-like
Clole_1638	SSF46600	C-terminal UvrC-binding domain of UvrB
Clole_1638	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_1639	SSF51445	(Trans)glycosidases
Clole_1639	SSF52279	Beta-D-glucan exohydrolase, C-terminal domain
Clole_1640	SSF49303	beta-Galactosidase/glucuronidase domain
Clole_1640	SSF49785	Galactose-binding domain-like
Clole_1640	SSF51445	(Trans)glycosidases
Clole_1641	SSF82549	DAK1/DegV-like
Clole_1642	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_1644	SSF55383	Copper amine oxidase, domain N
Clole_1644	SSF55797	PR-1-like
Clole_1645	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_1646	SSF55383	Copper amine oxidase, domain N
Clole_1647	SSF46600	C-terminal UvrC-binding domain of UvrB
Clole_1647	SSF47781	RuvA domain 2-like
Clole_1647	SSF82771	GIY-YIG endonuclease
Clole_1648	SSF53795	PEP carboxykinase-like
Clole_1648	SSF75138	HprK N-terminal domain-like
Clole_1649	SSF53067	Actin-like ATPase domain
Clole_1651	SSF51658	Xylose isomerase-like
Clole_1652	SSF54001	Cysteine proteinases
Clole_1653	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
Clole_1654	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Clole_1655	SSF46785	"Winged helix" DNA-binding domain
Clole_1657	SSF52788	Phosphotyrosine protein phosphatases I
Clole_1659	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_1660	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_1660	SSF52980	Restriction endonuclease-like
Clole_1661	SSF56784	HAD-like
Clole_1663	SSF51445	(Trans)glycosidases
Clole_1663	SSF52833	Thioredoxin-like
Clole_1663	SSF54556	Chitinase insertion domain
Clole_1665	SSF110942	HSP90 C-terminal domain
Clole_1665	SSF54211	Ribosomal protein S5 domain 2-like
Clole_1665	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Clole_1668	SSF55120	Pseudouridine synthase
Clole_1671	SSF52266	SGNH hydrolase
Clole_1672	SSF50156	PDZ domain-like
Clole_1672	SSF50494	Trypsin-like serine proteases
Clole_1673	SSF52172	CheY-like
Clole_1674	SSF47384	Homodimeric domain of signal transducing histidine kinase
Clole_1674	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Clole_1675	SSF109998	Triger factor/SurA peptide-binding domain-like
Clole_1675	SSF54534	FKBP-like
Clole_1676	SSF117892	Band 7/SPFH domain
Clole_1678	SSF53681	Aspartate/glutamate racemase
Clole_1680	SSF109604	HD-domain/PDEase-like
Clole_1683	SSF82771	GIY-YIG endonuclease
Clole_1685	SSF46785	"Winged helix" DNA-binding domain
Clole_1686	SSF53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes
Clole_1687	SSF52141	Uracil-DNA glycosylase-like
Clole_1688	SSF55681	Class II aaRS and biotin synthetases
Clole_1690	SSF51735	NAD(P)-binding Rossmann-fold domains
Clole_1690	SSF56327	LDH C-terminal domain-like
Clole_1691	SSF102114	Radical SAM enzymes
Clole_1692	SSF51998	PFL-like glycyl radical enzymes
Clole_1693	SSF53098	Ribonuclease H-like
Clole_1694	SSF52743	Subtilisin-like
Clole_1695	SSF52743	Subtilisin-like
Clole_1696	SSF52743	Subtilisin-like
Clole_1697	SSF52743	Subtilisin-like
Clole_1698	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_1701	SSF47090	PGBD-like
Clole_1702	SSF63411	LuxS/MPP-like metallohydrolase
Clole_1703	SSF82649	SufE/NifU
Clole_1705	SSF53383	PLP-dependent transferases
Clole_1706	SSF53448	Nucleotide-diphospho-sugar transferases
Clole_1707	SSF51735	NAD(P)-binding Rossmann-fold domains
Clole_1708	SSF52467	DHS-like NAD/FAD-binding domain
Clole_1708	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
Clole_1709	SSF53448	Nucleotide-diphospho-sugar transferases
Clole_1711	SSF51735	NAD(P)-binding Rossmann-fold domains
Clole_1712	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Clole_1713	SSF51735	NAD(P)-binding Rossmann-fold domains
Clole_1714	SSF51569	Aldolase
Clole_1716	SSF160246	EspE N-terminal domain-like
Clole_1716	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_1717	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_1719	SSF54523	Pili subunits
Clole_1721	SSF54523	Pili subunits
Clole_1723	SSF53067	Actin-like ATPase domain
Clole_1729	SSF56784	HAD-like
Clole_1730	SSF54523	Pili subunits
Clole_1731	SSF54523	Pili subunits
Clole_1732	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_1733	SSF53092	Creatinase/prolidase N-terminal domain
Clole_1733	SSF55920	Creatinase/aminopeptidase
Clole_1734	SSF50104	Translation proteins SH3-like domain
Clole_1734	SSF50249	Nucleic acid-binding proteins
Clole_1735	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_1744	SSF48013	NusB-like
Clole_1746	SSF116842	XseB-like
Clole_1747	SSF48576	Terpenoid synthases
Clole_1750	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
Clole_1750	SSF52922	TK C-terminal domain-like
Clole_1751	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Clole_1751	SSF55174	Alpha-L RNA-binding motif
Clole_1752	SSF111331	NAD kinase/diacylglycerol kinase-like
Clole_1753	SSF46785	"Winged helix" DNA-binding domain
Clole_1753	SSF55252	C-terminal domain of arginine repressor
Clole_1754	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_1755	SSF50156	PDZ domain-like
Clole_1755	SSF50494	Trypsin-like serine proteases
Clole_1756	SSF46894	C-terminal effector domain of the bipartite response regulators
Clole_1756	SSF52172	CheY-like
Clole_1760	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Clole_1762	SSF50475	FMN-binding split barrel
Clole_1765	SSF49384	Carbohydrate-binding domain
Clole_1765	SSF51445	(Trans)glycosidases
Clole_1766	SSF48256	Citrate synthase
Clole_1770	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_1771	SSF63562	RPB6/omega subunit-like
Clole_1772	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_1773	SSF56420	Peptide deformylase
Clole_1774	SSF50486	FMT C-terminal domain-like
Clole_1774	SSF53328	Formyltransferase
Clole_1776	SSF48013	NusB-like
Clole_1776	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Clole_1777	SSF102114	Radical SAM enzymes
Clole_1778	SSF81606	PP2C-like
Clole_1779	SSF54184	Penicillin-binding protein 2x (pbp-2x), c-terminal domain
Clole_1779	SSF56112	Protein kinase-like (PK-like)
Clole_1780	SSF50249	Nucleic acid-binding proteins
Clole_1780	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_1781	SSF51366	Ribulose-phoshate binding barrel
Clole_1782	SSF63862	Thiamin pyrophosphokinase, substrate-binding domain
Clole_1782	SSF63999	Thiamin pyrophosphokinase, catalytic domain
Clole_1783	SSF143800	L28p-like
Clole_1785	SSF101473	DhaL-like
Clole_1786	SSF50249	Nucleic acid-binding proteins
Clole_1786	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_1787	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Clole_1788	SSF52374	Nucleotidylyl transferase
Clole_1790	SSF63411	LuxS/MPP-like metallohydrolase
Clole_1791	SSF51735	NAD(P)-binding Rossmann-fold domains
Clole_1793	SSF55120	Pseudouridine synthase
Clole_1795	SSF48452	TPR-like
Clole_1796	SSF52980	Restriction endonuclease-like
Clole_1797	SSF51445	(Trans)glycosidases
Clole_1798	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_1799	SSF53300	vWA-like
Clole_1801	SSF49373	Invasin/intimin cell-adhesion fragments
Clole_1801	SSF49452	Starch-binding domain-like
Clole_1801	SSF51011	Glycosyl hydrolase domain
Clole_1801	SSF51445	(Trans)glycosidases
Clole_1801	SSF81296	E set domains
Clole_1802	SSF56281	Metallo-hydrolase/oxidoreductase
Clole_1803	SSF144083	Magnesium transport protein CorA, transmembrane region
Clole_1804	SSF51338	Composite domain of metallo-dependent hydrolases
Clole_1804	SSF51556	Metallo-dependent hydrolases
Clole_1805	SSF55486	Metalloproteases ("zincins"), catalytic domain
Clole_1806	SSF63992	Dipeptide transport protein
Clole_1807	SSF53254	Phosphoglycerate mutase-like
Clole_1808	SSF51735	NAD(P)-binding Rossmann-fold domains
Clole_1808	SSF75615	Siroheme synthase middle domains-like
Clole_1809	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_1811	SSF53671	Aspartate/ornithine carbamoyltransferase
Clole_1812	SSF51338	Composite domain of metallo-dependent hydrolases
Clole_1812	SSF51556	Metallo-dependent hydrolases
Clole_1813	SSF51366	Ribulose-phoshate binding barrel
Clole_1814	SSF52021	Carbamoyl phosphate synthetase, small subunit N-terminal domain
Clole_1814	SSF52317	Class I glutamine amidotransferase-like
Clole_1815	SSF48108	Carbamoyl phosphate synthetase, large subunit connection domain
Clole_1815	SSF52335	Methylglyoxal synthase-like
Clole_1815	SSF52440	PreATP-grasp domain
Clole_1815	SSF56059	Glutathione synthetase ATP-binding domain-like
Clole_1816	SSF52343	Ferredoxin reductase-like, C-terminal NADP-linked domain
Clole_1816	SSF63380	Riboflavin synthase domain-like
Clole_1817	SSF51395	FMN-linked oxidoreductases
Clole_1818	SSF53271	PRTase-like
Clole_1820	SSF51735	NAD(P)-binding Rossmann-fold domains
Clole_1821	SSF56281	Metallo-hydrolase/oxidoreductase
Clole_1823	SSF56349	DNA breaking-rejoining enzymes
Clole_1825	SSF47413	lambda repressor-like DNA-binding domains
Clole_1826	SSF47413	lambda repressor-like DNA-binding domains
Clole_1839	SSF55979	DNA clamp
Clole_1843	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Clole_1849	SSF56349	DNA breaking-rejoining enzymes
Clole_1850	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
Clole_1851	SSF56349	DNA breaking-rejoining enzymes
Clole_1853	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_1858	SSF56563	Major capsid protein gp5
Clole_1880	SSF55166	Hedgehog/DD-peptidase
Clole_1885	SSF47413	lambda repressor-like DNA-binding domains
Clole_1889	SSF52172	CheY-like
Clole_1890	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Clole_1890	SSF55890	Sporulation response regulatory protein Spo0B
Clole_1893	SSF143548	Serine metabolism enzymes domain
Clole_1893	SSF55021	ACT-like
Clole_1895	SSF51905	FAD/NAD(P)-binding domain
Clole_1897	SSF82549	DAK1/DegV-like
Clole_1899	SSF46689	Homeodomain-like
Clole_1899	SSF48295	TrpR-like
Clole_1900	SSF53098	Ribonuclease H-like
Clole_1903	SSF160996	HI0933 insert domain-like
Clole_1903	SSF51905	FAD/NAD(P)-binding domain
Clole_1904	SSF51905	FAD/NAD(P)-binding domain
Clole_1905	SSF53271	PRTase-like
Clole_1909	SSF56784	HAD-like
Clole_1910	SSF109998	Triger factor/SurA peptide-binding domain-like
Clole_1910	SSF54534	FKBP-like
Clole_1911	SSF56300	Metallo-dependent phosphatases
Clole_1912	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_1913	SSF161098	MetI-like
Clole_1914	SSF53850	Periplasmic binding protein-like II
Clole_1916	SSF55826	YbaK/ProRS associated domain
Clole_1918	SSF52151	FabD/lysophospholipase-like
Clole_1920	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_1921	SSF51445	(Trans)glycosidases
Clole_1923	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_1925	SSF50249	Nucleic acid-binding proteins
Clole_1928	SSF46589	tRNA-binding arm
Clole_1928	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
Clole_1928	SSF50677	ValRS/IleRS/LeuRS editing domain
Clole_1928	SSF52374	Nucleotidylyl transferase
Clole_1929	SSF47413	lambda repressor-like DNA-binding domains
Clole_1930	SSF160964	MalF N-terminal region-like
Clole_1930	SSF161098	MetI-like
Clole_1931	SSF161098	MetI-like
Clole_1932	SSF53850	Periplasmic binding protein-like II
Clole_1933	SSF51445	(Trans)glycosidases
Clole_1933	SSF81296	E set domains
Clole_1935	SSF56712	Prokaryotic type I DNA topoisomerase
Clole_1936	SSF53474	alpha/beta-Hydrolases
Clole_1937	SSF75217	alpha/beta knot
Clole_1938	SSF50044	SH3-domain
Clole_1938	SSF54001	Cysteine proteinases
Clole_1939	SSF160443	SMR domain-like
Clole_1939	SSF48334	DNA repair protein MutS, domain III
Clole_1939	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_1940	SSF46894	C-terminal effector domain of the bipartite response regulators
Clole_1940	SSF52172	CheY-like
Clole_1941	SSF158472	HAMP domain-like
Clole_1941	SSF47384	Homodimeric domain of signal transducing histidine kinase
Clole_1941	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Clole_1942	SSF109604	HD-domain/PDEase-like
Clole_1946	SSF50249	Nucleic acid-binding proteins
Clole_1946	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Clole_1948	SSF46689	Homeodomain-like
Clole_1950	SSF46689	Homeodomain-like
Clole_1950	SSF53098	Ribonuclease H-like
Clole_1951	SSF55486	Metalloproteases ("zincins"), catalytic domain
Clole_1951	SSF56436	C-type lectin-like
Clole_1956	SSF46609	Fe,Mn superoxide dismutase (SOD), N-terminal domain
Clole_1956	SSF54719	Fe,Mn superoxide dismutase (SOD), C-terminal domain
Clole_1957	SSF109604	HD-domain/PDEase-like
Clole_1959	SSF48264	Cytochrome P450
Clole_1961	SSF159888	YdhG-like
Clole_1963	SSF53474	alpha/beta-Hydrolases
Clole_1964	SSF55298	YjgF-like
Clole_1966	SSF53213	LigB-like
Clole_1967	SSF49384	Carbohydrate-binding domain
Clole_1967	SSF52266	SGNH hydrolase
Clole_1968	SSF49384	Carbohydrate-binding domain
Clole_1968	SSF49785	Galactose-binding domain-like
Clole_1968	SSF51445	(Trans)glycosidases
Clole_1968	SSF81296	E set domains
Clole_1969	SSF50447	Translation proteins
Clole_1969	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_1969	SSF54211	Ribosomal protein S5 domain 2-like
Clole_1969	SSF54980	EF-G C-terminal domain-like
Clole_1971	SSF50475	FMN-binding split barrel
Clole_1977	SSF54913	GlnB-like
Clole_1979	SSF46689	Homeodomain-like
Clole_1980	SSF51395	FMN-linked oxidoreductases
Clole_1980	SSF51735	NAD(P)-binding Rossmann-fold domains
Clole_1980	SSF51971	Nucleotide-binding domain
Clole_1982	SSF111331	NAD kinase/diacylglycerol kinase-like
Clole_1983	SSF110710	TTHA0583/YokD-like
Clole_1984	SSF118215	Proton glutamate symport protein
Clole_1985	SSF51395	FMN-linked oxidoreductases
Clole_1986	SSF52777	CoA-dependent acyltransferases
Clole_1987	SSF47413	lambda repressor-like DNA-binding domains
Clole_1987	SSF49367	Superoxide reductase-like
Clole_1987	SSF57802	Rubredoxin-like
Clole_1989	SSF47413	lambda repressor-like DNA-binding domains
Clole_1990	SSF102114	Radical SAM enzymes
Clole_1992	SSF47240	Ferritin-like
Clole_1996	SSF46785	"Winged helix" DNA-binding domain
Clole_1997	SSF53720	ALDH-like
Clole_2000	SSF46785	"Winged helix" DNA-binding domain
Clole_2000	SSF53850	Periplasmic binding protein-like II
Clole_2009	SSF89623	Ribose/Galactose isomerase RpiB/AlsB
Clole_2010	SSF144010	CofE-like
Clole_2011	SSF50447	Translation proteins
Clole_2011	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_2011	SSF54980	EF-G C-terminal domain-like
Clole_2012	SSF51338	Composite domain of metallo-dependent hydrolases
Clole_2012	SSF51556	Metallo-dependent hydrolases
Clole_2014	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Clole_2015	SSF56529	FAH
Clole_2017	SSF51998	PFL-like glycyl radical enzymes
Clole_2018	SSF102114	Radical SAM enzymes
Clole_2019	SSF51283	dUTPase-like
Clole_2020	SSF51998	PFL-like glycyl radical enzymes
Clole_2021	SSF53300	vWA-like
Clole_2022	SSF53300	vWA-like
Clole_2025	SSF47188	Hemerythrin-like
Clole_2026	SSF52218	Flavoproteins
Clole_2026	SSF56281	Metallo-hydrolase/oxidoreductase
Clole_2027	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
Clole_2027	SSF52922	TK C-terminal domain-like
Clole_2027	SSF53323	Pyruvate-ferredoxin oxidoreductase, PFOR, domain III
Clole_2027	SSF54862	4Fe-4S ferredoxins
Clole_2030	SSF63411	LuxS/MPP-like metallohydrolase
Clole_2031	SSF141523	L,D-transpeptidase catalytic domain-like
Clole_2032	SSF53383	PLP-dependent transferases
Clole_2033	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_2034	SSF52091	SpoIIaa-like
Clole_2035	SSF54001	Cysteine proteinases
Clole_2038	SSF53697	SIS domain
Clole_2038	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
Clole_2040	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
Clole_2041	SSF53920	Fe-only hydrogenase
Clole_2041	SSF54862	4Fe-4S ferredoxins
Clole_2043	SSF53448	Nucleotide-diphospho-sugar transferases
Clole_2044	SSF88713	Glycoside hydrolase/deacetylase
Clole_2046	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_2046	SSF81923	Double Clp-N motif
Clole_2048	SSF53850	Periplasmic binding protein-like II
Clole_2049	SSF158472	HAMP domain-like
Clole_2049	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Clole_2050	SSF46689	Homeodomain-like
Clole_2050	SSF52172	CheY-like
Clole_2051	SSF161098	MetI-like
Clole_2052	SSF161098	MetI-like
Clole_2053	SSF53850	Periplasmic binding protein-like II
Clole_2056	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_2057	SSF109604	HD-domain/PDEase-like
Clole_2058	SSF55486	Metalloproteases ("zincins"), catalytic domain
Clole_2059	SSF53927	Cytidine deaminase-like
Clole_2060	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_2060	SSF54814	Prokaryotic type KH domain (KH-domain type II)
Clole_2062	SSF50249	Nucleic acid-binding proteins
Clole_2062	SSF57863	ArfGap/RecO-like zinc finger
Clole_2063	SSF47807	5' to 3' exonuclease, C-terminal subdomain
Clole_2063	SSF53098	Ribonuclease H-like
Clole_2063	SSF56672	DNA/RNA polymerases
Clole_2063	SSF88723	PIN domain-like
Clole_2064	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_2065	SSF53850	Periplasmic binding protein-like II
Clole_2066	SSF54197	HIT-like
Clole_2067	SSF53067	Actin-like ATPase domain
Clole_2067	SSF54285	MoaD/ThiS
Clole_2068	SSF55021	ACT-like
Clole_2069	SSF51998	PFL-like glycyl radical enzymes
Clole_2070	SSF53187	Zn-dependent exopeptidases
Clole_2072	SSF52374	Nucleotidylyl transferase
Clole_2072	SSF55174	Alpha-L RNA-binding motif
Clole_2073	SSF51011	Glycosyl hydrolase domain
Clole_2073	SSF51445	(Trans)glycosidases
Clole_2073	SSF81296	E set domains
Clole_2074	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_2076	SSF53187	Zn-dependent exopeptidases
Clole_2077	SSF102114	Radical SAM enzymes
Clole_2078	SSF56300	Metallo-dependent phosphatases
Clole_2079	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Clole_2080	SSF55120	Pseudouridine synthase
Clole_2080	SSF55174	Alpha-L RNA-binding motif
Clole_2081	SSF53671	Aspartate/ornithine carbamoyltransferase
Clole_2082	SSF53383	PLP-dependent transferases
Clole_2083	SSF51735	NAD(P)-binding Rossmann-fold domains
Clole_2083	SSF52283	Formate/glycerate dehydrogenase catalytic domain-like
Clole_2083	SSF55021	ACT-like
Clole_2084	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Clole_2085	SSF142019	Nqo1 FMN-binding domain-like
Clole_2085	SSF46548	alpha-helical ferredoxin
Clole_2090	SSF54862	4Fe-4S ferredoxins
Clole_2092	SSF52972	ITPase-like
Clole_2093	SSF102712	JAB1/MPN domain
Clole_2094	SSF53067	Actin-like ATPase domain
Clole_2097	SSF56519	Penicillin binding protein dimerisation domain
Clole_2097	SSF56601	beta-lactamase/transpeptidase-like
Clole_2098	SSF63848	Cell-division inhibitor MinC, C-terminal domain
Clole_2099	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_2100	SSF55229	Cell division protein MinE topological specificity domain
Clole_2102	SSF52335	Methylglyoxal synthase-like
Clole_2104	SSF102114	Radical SAM enzymes
Clole_2106	SSF50249	Nucleic acid-binding proteins
Clole_2107	SSF141091	L21p-like
Clole_2108	SSF118010	TM1457-like
Clole_2109	SSF110324	Ribosomal L27 protein-like
Clole_2110	SSF102741	Obg GTP-binding protein C-terminal domain
Clole_2110	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_2110	SSF82051	Obg GTP-binding protein N-terminal domain
Clole_2111	SSF75471	YhbY-like
Clole_2112	SSF109604	HD-domain/PDEase-like
Clole_2112	SSF52374	Nucleotidylyl transferase
Clole_2114	SSF81301	Nucleotidyltransferase
Clole_2115	SSF56601	beta-lactamase/transpeptidase-like
Clole_2115	SSF69189	Penicillin-binding protein associated domain
Clole_2116	SSF47781	RuvA domain 2-like
Clole_2117	SSF52172	CheY-like
Clole_2118	SSF103190	Sensory domain-like
Clole_2118	SSF158472	HAMP domain-like
Clole_2118	SSF47384	Homodimeric domain of signal transducing histidine kinase
Clole_2118	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Clole_2120	SSF56281	Metallo-hydrolase/oxidoreductase
Clole_2121	SSF48019	post-AAA+ oligomerization domain-like
Clole_2121	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_2122	SSF46992	Ribosomal protein S20
Clole_2123	SSF53163	HybD-like
Clole_2125	SSF50447	Translation proteins
Clole_2125	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_2125	SSF54980	EF-G C-terminal domain-like
Clole_2126	SSF102114	Radical SAM enzymes
Clole_2127	SSF46785	"Winged helix" DNA-binding domain
Clole_2127	SSF55781	GAF domain-like
Clole_2128	SSF51064	Head domain of nucleotide exchange factor GrpE
Clole_2128	SSF58014	Coiled-coil domain of nucleotide exchange factor GrpE
Clole_2129	SSF100920	Heat shock protein 70kD (HSP70), peptide-binding domain
Clole_2129	SSF100934	Heat shock protein 70kD (HSP70), C-terminal subdomain
Clole_2129	SSF53067	Actin-like ATPase domain
Clole_2130	SSF46565	Chaperone J-domain
Clole_2130	SSF49493	HSP40/DnaJ peptide-binding domain
Clole_2130	SSF57938	DnaJ/Hsp40 cysteine-rich domain
Clole_2132	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Clole_2133	SSF75217	alpha/beta knot
Clole_2133	SSF88697	PUA domain-like
Clole_2134	SSF52172	CheY-like
Clole_2135	SSF53383	PLP-dependent transferases
Clole_2136	SSF143437	THUMP domain-like
Clole_2136	SSF52402	Adenine nucleotide alpha hydrolases-like
Clole_2137	SSF55594	HPr-like
Clole_2138	SSF102114	Radical SAM enzymes
Clole_2140	SSF53098	Ribonuclease H-like
Clole_2142	SSF46785	"Winged helix" DNA-binding domain
Clole_2143	SSF56281	Metallo-hydrolase/oxidoreductase
Clole_2144	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
Clole_2144	SSF88946	Sigma2 domain of RNA polymerase sigma factors
Clole_2146	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Clole_2149	SSF52507	Homo-oligomeric flavin-containing Cys decarboxylases, HFCD
Clole_2150	SSF51735	NAD(P)-binding Rossmann-fold domains
Clole_2153	SSF53633	Carbamate kinase-like
Clole_2153	SSF55021	ACT-like
Clole_2154	SSF52096	ClpP/crotonase
Clole_2156	SSF46785	"Winged helix" DNA-binding domain
Clole_2156	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_2157	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_2158	SSF51735	NAD(P)-binding Rossmann-fold domains
Clole_2158	SSF53223	Aminoacid dehydrogenase-like, N-terminal domain
Clole_2159	SSF102114	Radical SAM enzymes
Clole_2162	SSF160996	HI0933 insert domain-like
Clole_2162	SSF51905	FAD/NAD(P)-binding domain
Clole_2163	SSF69593	Glycerol-3-phosphate (1)-acyltransferase
Clole_2165	SSF55166	Hedgehog/DD-peptidase
Clole_2166	SSF101353	Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS)
Clole_2166	SSF50447	Translation proteins
Clole_2166	SSF55186	ThrRS/AlaRS common domain
Clole_2166	SSF55681	Class II aaRS and biotin synthetases
Clole_2168	SSF89095	GatB/YqeY motif
Clole_2173	SSF56349	DNA breaking-rejoining enzymes
Clole_2175	SSF53720	ALDH-like
Clole_2179	SSF56300	Metallo-dependent phosphatases
Clole_2180	SSF141523	L,D-transpeptidase catalytic domain-like
Clole_2181	SSF51735	NAD(P)-binding Rossmann-fold domains
Clole_2181	SSF53223	Aminoacid dehydrogenase-like, N-terminal domain
Clole_2182	SSF109604	HD-domain/PDEase-like
Clole_2184	SSF102114	Radical SAM enzymes
Clole_2184	SSF52242	Cobalamin (vitamin B12)-binding domain
Clole_2185	SSF48150	DNA-glycosylase
Clole_2186	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
Clole_2188	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_2191	SSF46689	Homeodomain-like
Clole_2191	SSF48295	TrpR-like
Clole_2193	SSF53955	Lysozyme-like
Clole_2193	SSF56601	beta-lactamase/transpeptidase-like
Clole_2194	SSF55931	Glutamine synthetase/guanido kinase
Clole_2195	SSF53613	Ribokinase-like
Clole_2196	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_2198	SSF54211	Ribosomal protein S5 domain 2-like
Clole_2198	SSF54980	EF-G C-terminal domain-like
Clole_2199	SSF75625	YebC-like
Clole_2201	SSF55486	Metalloproteases ("zincins"), catalytic domain
Clole_2204	SSF50249	Nucleic acid-binding proteins
Clole_2204	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Clole_2205	SSF160631	SMI1/KNR4-like
Clole_2206	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_2207	SSF46689	Homeodomain-like
Clole_2207	SSF53098	Ribonuclease H-like
Clole_2208	SSF49384	Carbohydrate-binding domain
Clole_2208	SSF53300	vWA-like
Clole_2211	SSF81301	Nucleotidyltransferase
Clole_2217	SSF159245	AttH-like
Clole_2218	SSF51735	NAD(P)-binding Rossmann-fold domains
Clole_2221	SSF53098	Ribonuclease H-like
Clole_2222	SSF56300	Metallo-dependent phosphatases
Clole_2223	SSF51735	NAD(P)-binding Rossmann-fold domains
Clole_2223	SSF52283	Formate/glycerate dehydrogenase catalytic domain-like
Clole_2224	SSF49367	Superoxide reductase-like
Clole_2224	SSF57802	Rubredoxin-like
Clole_2225	SSF111126	Ligand-binding domain in the NO signalling and Golgi transport
Clole_2225	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
Clole_2227	SSF53383	PLP-dependent transferases
Clole_2229	SSF82771	GIY-YIG endonuclease
Clole_2230	SSF46600	C-terminal UvrC-binding domain of UvrB
Clole_2230	SSF82771	GIY-YIG endonuclease
Clole_2231	SSF51556	Metallo-dependent hydrolases
Clole_2232	SSF52402	Adenine nucleotide alpha hydrolases-like
Clole_2236	SSF46785	"Winged helix" DNA-binding domain
Clole_2236	SSF51306	LexA/Signal peptidase
Clole_2237	SSF52402	Adenine nucleotide alpha hydrolases-like
Clole_2237	SSF56317	Carbon-nitrogen hydrolase
Clole_2238	SSF53383	PLP-dependent transferases
Clole_2240	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Clole_2241	SSF50182	Sm-like ribonucleoproteins
Clole_2242	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_2243	SSF118116	DNA mismatch repair protein MutL
Clole_2243	SSF54211	Ribosomal protein S5 domain 2-like
Clole_2243	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Clole_2244	SSF48334	DNA repair protein MutS, domain III
Clole_2244	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_2244	SSF53150	DNA repair protein MutS, domain II
Clole_2244	SSF55271	DNA repair protein MutS, domain I
Clole_2245	SSF102114	Radical SAM enzymes
Clole_2248	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_2249	SSF47384	Homodimeric domain of signal transducing histidine kinase
Clole_2249	SSF55781	GAF domain-like
Clole_2249	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Clole_2250	SSF52172	CheY-like
Clole_2251	SSF50800	PK beta-barrel domain-like
Clole_2251	SSF51621	Phosphoenolpyruvate/pyruvate domain
Clole_2251	SSF52009	Phosphohistidine domain
Clole_2251	SSF52935	PK C-terminal domain-like
Clole_2252	SSF109604	HD-domain/PDEase-like
Clole_2253	SSF52402	Adenine nucleotide alpha hydrolases-like
Clole_2254	SSF53383	PLP-dependent transferases
Clole_2255	SSF51998	PFL-like glycyl radical enzymes
Clole_2256	SSF52335	Methylglyoxal synthase-like
Clole_2257	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_2257	SSF53098	Ribonuclease H-like
Clole_2258	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Clole_2259	SSF53098	Ribonuclease H-like
Clole_2261	SSF47757	Chemotaxis receptor methyltransferase CheR, N-terminal domain
Clole_2261	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Clole_2263	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_2264	SSF55298	YjgF-like
Clole_2265	SSF46689	Homeodomain-like
Clole_2265	SSF53697	SIS domain
Clole_2266	SSF51569	Aldolase
Clole_2266	SSF89000	post-HMGL domain-like
Clole_2268	SSF51230	Single hybrid motif
Clole_2270	SSF52096	ClpP/crotonase
Clole_2271	SSF55120	Pseudouridine synthase
Clole_2271	SSF55174	Alpha-L RNA-binding motif
Clole_2272	SSF56601	beta-lactamase/transpeptidase-like
Clole_2272	SSF69189	Penicillin-binding protein associated domain
Clole_2273	SSF46785	"Winged helix" DNA-binding domain
Clole_2275	SSF56601	beta-lactamase/transpeptidase-like
Clole_2275	SSF69189	Penicillin-binding protein associated domain
Clole_2276	SSF47648	Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain
Clole_2276	SSF52418	Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain
Clole_2276	SSF54680	Pyrimidine nucleoside phosphorylase C-terminal domain
Clole_2277	SSF143856	DeoB insert domain-like
Clole_2277	SSF53649	Alkaline phosphatase-like
Clole_2278	SSF56349	DNA breaking-rejoining enzymes
Clole_2280	SSF53271	PRTase-like
Clole_2281	SSF55120	Pseudouridine synthase
Clole_2281	SSF55174	Alpha-L RNA-binding motif
Clole_2283	SSF58113	Apolipoprotein A-I
Clole_2284	SSF55174	Alpha-L RNA-binding motif
Clole_2286	SSF51419	PLP-binding barrel
Clole_2288	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_2289	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
Clole_2289	SSF51735	NAD(P)-binding Rossmann-fold domains
Clole_2291	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_2292	SSF64438	CNF1/YfiH-like putative cysteine hydrolases
Clole_2293	SSF52980	Restriction endonuclease-like
Clole_2294	SSF160544	EscU C-terminal domain-like
Clole_2296	SSF53098	Ribonuclease H-like
Clole_2297	SSF51306	LexA/Signal peptidase
Clole_2298	SSF51306	LexA/Signal peptidase
Clole_2299	SSF51306	LexA/Signal peptidase
Clole_2300	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_2301	SSF50104	Translation proteins SH3-like domain
Clole_2302	SSF75217	alpha/beta knot
Clole_2303	SSF50346	PRC-barrel domain
Clole_2303	SSF50447	Translation proteins
Clole_2304	SSF54814	Prokaryotic type KH domain (KH-domain type II)
Clole_2305	SSF54565	Ribosomal protein S16
Clole_2306	SSF47446	Signal peptide-binding domain
Clole_2306	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_2307	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
Clole_2308	SSF47364	Domain of the SRP/SRP receptor G-proteins
Clole_2308	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_2309	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_2309	SSF75553	Smc hinge domain
Clole_2310	SSF54768	dsRNA-binding domain-like
Clole_2310	SSF69065	RNase III domain-like
Clole_2311	SSF47336	ACP-like
Clole_2312	SSF53659	Isocitrate/Isopropylmalate dehydrogenase-like
Clole_2313	SSF57829	Zn-binding ribosomal proteins
Clole_2315	SSF53067	Actin-like ATPase domain
Clole_2316	SSF53659	Isocitrate/Isopropylmalate dehydrogenase-like
Clole_2317	SSF52374	Nucleotidylyl transferase
Clole_2319	SSF46785	"Winged helix" DNA-binding domain
Clole_2320	SSF56712	Prokaryotic type I DNA topoisomerase
Clole_2320	SSF57783	Zinc beta-ribbon
Clole_2321	SSF102405	MCP/YpsA-like
Clole_2321	SSF46785	"Winged helix" DNA-binding domain
Clole_2322	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_2322	SSF54211	Ribosomal protein S5 domain 2-like
Clole_2324	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
Clole_2324	SSF88946	Sigma2 domain of RNA polymerase sigma factors
Clole_2325	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
Clole_2325	SSF88946	Sigma2 domain of RNA polymerase sigma factors
Clole_2327	SSF52490	Tubulin nucleotide-binding domain-like
Clole_2327	SSF55307	Tubulin C-terminal domain-like
Clole_2329	SSF55205	EPT/RTPC-like
Clole_2331	SSF51984	MurCD N-terminal domain
Clole_2331	SSF53244	MurD-like peptide ligases, peptide-binding domain
Clole_2331	SSF53623	MurD-like peptide ligases, catalytic domain
Clole_2333	SSF53244	MurD-like peptide ligases, peptide-binding domain
Clole_2333	SSF53623	MurD-like peptide ligases, catalytic domain
Clole_2333	SSF63418	MurE/MurF N-terminal domain
Clole_2334	SSF53244	MurD-like peptide ligases, peptide-binding domain
Clole_2334	SSF53623	MurD-like peptide ligases, catalytic domain
Clole_2334	SSF63418	MurE/MurF N-terminal domain
Clole_2335	SSF54184	Penicillin-binding protein 2x (pbp-2x), c-terminal domain
Clole_2335	SSF56519	Penicillin binding protein dimerisation domain
Clole_2335	SSF56601	beta-lactamase/transpeptidase-like
Clole_2336	SSF54184	Penicillin-binding protein 2x (pbp-2x), c-terminal domain
Clole_2336	SSF56519	Penicillin binding protein dimerisation domain
Clole_2336	SSF56601	beta-lactamase/transpeptidase-like
Clole_2338	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Clole_2338	SSF81799	Putative methyltransferase TM0872, insert domain
Clole_2339	SSF89447	AbrB/MazE/MraZ-like
Clole_2343	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_2343	SSF81271	TGS-like
Clole_2347	SSF50182	Sm-like ribonucleoproteins
Clole_2347	SSF82689	Mechanosensitive channel protein MscS (YggB), C-terminal domain
Clole_2348	SSF49879	SMAD/FHA domain
Clole_2349	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_2350	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_2350	SSF55186	ThrRS/AlaRS common domain
Clole_2351	SSF102705	NIF3 (NGG1p interacting factor 3)-like
Clole_2352	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Clole_2353	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
Clole_2353	SSF88946	Sigma2 domain of RNA polymerase sigma factors
Clole_2354	SSF56731	DNA primase core
Clole_2354	SSF57783	Zinc beta-ribbon
Clole_2355	SSF109604	HD-domain/PDEase-like
Clole_2356	SSF53474	alpha/beta-Hydrolases
Clole_2358	SSF51621	Phosphoenolpyruvate/pyruvate domain
Clole_2358	SSF52009	Phosphohistidine domain
Clole_2358	SSF56059	Glutathione synthetase ATP-binding domain-like
Clole_2359	SSF52954	Class II aaRS ABD-related
Clole_2359	SSF55681	Class II aaRS and biotin synthetases
Clole_2361	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
Clole_2361	SSF88946	Sigma2 domain of RNA polymerase sigma factors
Clole_2362	SSF56349	DNA breaking-rejoining enzymes
Clole_2364	SSF46689	Homeodomain-like
Clole_2367	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_2368	SSF53041	Resolvase-like
Clole_2370	SSF52980	Restriction endonuclease-like
Clole_2373	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
Clole_2374	SSF56176	FAD-binding/transporter-associated domain-like
Clole_2375	SSF49299	PKD domain
Clole_2375	SSF55383	Copper amine oxidase, domain N
Clole_2376	SSF56519	Penicillin binding protein dimerisation domain
Clole_2376	SSF56601	beta-lactamase/transpeptidase-like
Clole_2379	SSF102829	Cell division protein ZapA-like
Clole_2380	SSF46785	"Winged helix" DNA-binding domain
Clole_2380	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_2381	SSF46929	DNA helicase RuvA subunit, C-terminal domain
Clole_2381	SSF47781	RuvA domain 2-like
Clole_2381	SSF50249	Nucleic acid-binding proteins
Clole_2382	SSF158221	YnzC-like
Clole_2383	SSF53633	Carbamate kinase-like
Clole_2384	SSF101904	GyrA/ParC C-terminal domain-like
Clole_2384	SSF56719	Type II DNA topoisomerase
Clole_2385	SSF54211	Ribosomal protein S5 domain 2-like
Clole_2385	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Clole_2385	SSF56719	Type II DNA topoisomerase
Clole_2386	SSF50891	Cyclophilin-like
Clole_2388	SSF50891	Cyclophilin-like
Clole_2389	SSF101821	Aminopeptidase/glucanase lid domain
Clole_2389	SSF53187	Zn-dependent exopeptidases
Clole_2390	SSF141523	L,D-transpeptidase catalytic domain-like
Clole_2392	SSF81606	PP2C-like
Clole_2393	SSF53920	Fe-only hydrogenase
Clole_2393	SSF54862	4Fe-4S ferredoxins
Clole_2393	SSF55785	PYP-like sensor domain (PAS domain)
Clole_2394	SSF53920	Fe-only hydrogenase
Clole_2394	SSF54292	2Fe-2S ferredoxin-like
Clole_2394	SSF54862	4Fe-4S ferredoxins
Clole_2395	SSF140490	Nqo1C-terminal domain-like
Clole_2395	SSF142019	Nqo1 FMN-binding domain-like
Clole_2395	SSF142984	Nqo1 middle domain-like
Clole_2395	SSF52833	Thioredoxin-like
Clole_2395	SSF54862	4Fe-4S ferredoxins
Clole_2396	SSF52833	Thioredoxin-like
Clole_2397	SSF52833	Thioredoxin-like
Clole_2398	SSF89550	PHP domain-like
Clole_2400	SSF53920	Fe-only hydrogenase
Clole_2400	SSF54862	4Fe-4S ferredoxins
Clole_2401	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Clole_2402	SSF75138	HprK N-terminal domain-like
Clole_2405	SSF50475	FMN-binding split barrel
Clole_2406	SSF52009	Phosphohistidine domain
Clole_2409	SSF50249	Nucleic acid-binding proteins
Clole_2409	SSF54211	Ribosomal protein S5 domain 2-like
Clole_2409	SSF54791	Eukaryotic type KH-domain (KH-domain type I)
Clole_2409	SSF55666	Ribonuclease PH domain 2-like
Clole_2410	SSF47060	S15/NS1 RNA-binding domain
Clole_2411	SSF52374	Nucleotidylyl transferase
Clole_2411	SSF82114	Riboflavin kinase-like
Clole_2412	SSF55120	Pseudouridine synthase
Clole_2413	SSF89919	Ribosome-binding factor A, RbfA
Clole_2414	SSF50447	Translation proteins
Clole_2414	SSF52156	Initiation factor IF2/eIF5b, domain 3
Clole_2414	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_2415	SSF55315	L30e-like
Clole_2416	SSF64376	YlxR-like
Clole_2417	SSF50249	Nucleic acid-binding proteins
Clole_2417	SSF54814	Prokaryotic type KH domain (KH-domain type II)
Clole_2417	SSF69705	Transcription factor NusA, N-terminal domain
Clole_2418	SSF74942	YhbC-like, C-terminal domain
Clole_2418	SSF75420	YhbC-like, N-terminal domain
Clole_2419	SSF51717	Dihydropteroate synthetase-like
Clole_2419	SSF56014	Nitrite and sulphite reductase 4Fe-4S domain-like
Clole_2420	SSF50156	PDZ domain-like
Clole_2421	SSF51735	NAD(P)-binding Rossmann-fold domains
Clole_2421	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
Clole_2421	SSF69055	1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain
Clole_2423	SSF64005	Undecaprenyl diphosphate synthase
Clole_2424	SSF55194	Ribosome recycling factor, RRF
Clole_2425	SSF53633	Carbamate kinase-like
Clole_2426	SSF46934	UBA-like
Clole_2426	SSF54713	Elongation factor Ts (EF-Ts), dimerisation domain
Clole_2427	SSF52313	Ribosomal protein S2
Clole_2431	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
Clole_2431	SSF88946	Sigma2 domain of RNA polymerase sigma factors
Clole_2432	SSF64438	CNF1/YfiH-like putative cysteine hydrolases
Clole_2433	SSF103039	CheC-like
Clole_2434	SSF50341	CheW-like
Clole_2435	SSF47226	Histidine-containing phosphotransfer domain, HPT domain
Clole_2435	SSF47384	Homodimeric domain of signal transducing histidine kinase
Clole_2435	SSF50341	CheW-like
Clole_2435	SSF55052	CheY-binding domain of CheA
Clole_2435	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Clole_2436	SSF52738	Methylesterase CheB, C-terminal domain
Clole_2437	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_2438	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_2440	SSF160544	EscU C-terminal domain-like
Clole_2445	SSF52172	CheY-like
Clole_2446	SSF101801	Surface presentation of antigens (SPOA)
Clole_2446	SSF103039	CheC-like
Clole_2447	SSF101801	Surface presentation of antigens (SPOA)
Clole_2447	SSF103039	CheC-like
Clole_2449	SSF103088	OmpA-like
Clole_2452	SSF117143	Flagellar hook protein flgE
Clole_2455	SSF158791	MgtE N-terminal domain-like
Clole_2457	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_2459	SSF48029	FliG
Clole_2465	SSF48557	L-aspartase-like
Clole_2466	SSF109604	HD-domain/PDEase-like
Clole_2466	SSF54791	Eukaryotic type KH-domain (KH-domain type I)
Clole_2467	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_2467	SSF54752	RecA protein, C-terminal domain
Clole_2468	SSF142433	CinA-like
Clole_2469	SSF53218	Molybdenum cofactor biosynthesis proteins
Clole_2472	SSF52402	Adenine nucleotide alpha hydrolases-like
Clole_2472	SSF69864	Argininosuccinate synthetase, C-terminal domain
Clole_2473	SSF48557	L-aspartase-like
Clole_2476	SSF51011	Glycosyl hydrolase domain
Clole_2476	SSF51445	(Trans)glycosidases
Clole_2476	SSF81296	E set domains
Clole_2478	SSF56784	HAD-like
Clole_2478	SSF81653	Calcium ATPase, transduction domain A
Clole_2478	SSF81660	Metal cation-transporting ATPase, ATP-binding domain N
Clole_2478	SSF81665	Calcium ATPase, transmembrane domain M
Clole_2479	SSF53067	Actin-like ATPase domain
Clole_2480	SSF53774	Glutaminase/Asparaginase
Clole_2481	SSF101386	all-alpha NTP pyrophosphatases
Clole_2481	SSF141734	HisI-like
Clole_2482	SSF51366	Ribulose-phoshate binding barrel
Clole_2483	SSF51366	Ribulose-phoshate binding barrel
Clole_2484	SSF52317	Class I glutamine amidotransferase-like
Clole_2485	SSF54211	Ribosomal protein S5 domain 2-like
Clole_2486	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Clole_2488	SSF53383	PLP-dependent transferases
Clole_2489	SSF53720	ALDH-like
Clole_2490	SSF53850	Periplasmic binding protein-like II
Clole_2491	SSF55681	Class II aaRS and biotin synthetases
Clole_2492	SSF81901	HCP-like
Clole_2493	SSF81606	PP2C-like
Clole_2494	SSF53300	vWA-like
Clole_2495	SSF56112	Protein kinase-like (PK-like)
Clole_2496	SSF51316	Mss4-like
Clole_2496	SSF55068	Peptide methionine sulfoxide reductase
Clole_2497	SSF55383	Copper amine oxidase, domain N
Clole_2499	SSF51445	(Trans)glycosidases
Clole_2500	SSF46689	Homeodomain-like
Clole_2500	SSF51215	Regulatory protein AraC
Clole_2501	SSF109604	HD-domain/PDEase-like
Clole_2502	SSF161098	MetI-like
Clole_2503	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_2504	SSF53850	Periplasmic binding protein-like II
Clole_2505	SSF52507	Homo-oligomeric flavin-containing Cys decarboxylases, HFCD
Clole_2507	SSF143968	UbiD C-terminal domain-like
Clole_2507	SSF50475	FMN-binding split barrel
Clole_2508	SSF53383	PLP-dependent transferases
Clole_2510	SSF54631	CBS-domain pair
Clole_2510	SSF55021	ACT-like
Clole_2511	SSF56266	DmpA/ArgJ-like
Clole_2514	SSF56300	Metallo-dependent phosphatases
Clole_2515	SSF52200	Toll/Interleukin receptor TIR domain
Clole_2516	SSF142906	YjbR-like
Clole_2517	SSF52467	DHS-like NAD/FAD-binding domain
Clole_2519	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_2520	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_2523	SSF160975	AF1531-like
Clole_2523	SSF53098	Ribonuclease H-like
Clole_2524	SSF55124	Nitrite/Sulfite reductase N-terminal domain-like
Clole_2524	SSF56014	Nitrite and sulphite reductase 4Fe-4S domain-like
Clole_2525	SSF56519	Penicillin binding protein dimerisation domain
Clole_2525	SSF56601	beta-lactamase/transpeptidase-like
Clole_2527	SSF88713	Glycoside hydrolase/deacetylase
Clole_2529	SSF47188	Hemerythrin-like
Clole_2530	SSF52833	Thioredoxin-like
Clole_2531	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Clole_2532	SSF46785	"Winged helix" DNA-binding domain
Clole_2533	SSF53383	PLP-dependent transferases
Clole_2534	SSF46785	"Winged helix" DNA-binding domain
Clole_2534	SSF54909	Dimeric alpha+beta barrel
Clole_2536	SSF53901	Thiolase-like
Clole_2541	SSF102114	Radical SAM enzymes
Clole_2542	SSF56281	Metallo-hydrolase/oxidoreductase
Clole_2543	SSF69500	DTD-like
Clole_2544	SSF109604	HD-domain/PDEase-like
Clole_2544	SSF55021	ACT-like
Clole_2544	SSF81271	TGS-like
Clole_2544	SSF81301	Nucleotidyltransferase
Clole_2545	SSF53271	PRTase-like
Clole_2546	SSF50249	Nucleic acid-binding proteins
Clole_2547	SSF69572	Activating enzymes of the ubiquitin-like proteins
Clole_2550	SSF52833	Thioredoxin-like
Clole_2551	SSF51905	FAD/NAD(P)-binding domain
Clole_2551	SSF52821	Rhodanese/Cell cycle control phosphatase
Clole_2551	SSF55424	FAD/NAD-linked reductases, dimerisation (C-terminal) domain
Clole_2551	SSF64307	SirA-like
Clole_2551	SSF75169	DsrEFH-like
Clole_2553	SSF53822	Periplasmic binding protein-like I
Clole_2555	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Clole_2559	SSF50475	FMN-binding split barrel
Clole_2560	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
Clole_2561	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
Clole_2562	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
Clole_2563	SSF102114	Radical SAM enzymes
Clole_2565	SSF103473	MFS general substrate transporter
Clole_2566	SSF89550	PHP domain-like
Clole_2568	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_2569	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_2569	SSF90123	ABC transporter transmembrane region
Clole_2570	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_2570	SSF90123	ABC transporter transmembrane region
Clole_2571	SSF46689	Homeodomain-like
Clole_2572	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Clole_2573	SSF56784	HAD-like
Clole_2575	SSF53218	Molybdenum cofactor biosynthesis proteins
Clole_2576	SSF48208	Six-hairpin glycosidases
Clole_2576	SSF74650	Galactose mutarotase-like
Clole_2578	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_2579	SSF50249	Nucleic acid-binding proteins
Clole_2579	SSF55681	Class II aaRS and biotin synthetases
Clole_2580	SSF55315	L30e-like
Clole_2580	SSF75217	alpha/beta knot
Clole_2581	SSF116726	TrkA C-terminal domain-like
Clole_2581	SSF51735	NAD(P)-binding Rossmann-fold domains
Clole_2583	SSF50800	PK beta-barrel domain-like
Clole_2583	SSF51621	Phosphoenolpyruvate/pyruvate domain
Clole_2583	SSF52009	Phosphohistidine domain
Clole_2583	SSF52935	PK C-terminal domain-like
Clole_2584	SSF53784	Phosphofructokinase
Clole_2585	SSF89550	PHP domain-like
Clole_2586	SSF53383	PLP-dependent transferases
Clole_2587	SSF161098	MetI-like
Clole_2588	SSF161098	MetI-like
Clole_2589	SSF53850	Periplasmic binding protein-like II
Clole_2590	SSF46689	Homeodomain-like
Clole_2590	SSF52172	CheY-like
Clole_2591	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Clole_2593	SSF52266	SGNH hydrolase
Clole_2594	SSF51445	(Trans)glycosidases
Clole_2594	SSF52279	Beta-D-glucan exohydrolase, C-terminal domain
Clole_2595	SSF46689	Homeodomain-like
Clole_2595	SSF51215	Regulatory protein AraC
Clole_2596	SSF46955	Putative DNA-binding domain
Clole_2596	SSF50249	Nucleic acid-binding proteins
Clole_2596	SSF54991	Anticodon-binding domain of PheRS
Clole_2596	SSF55681	Class II aaRS and biotin synthetases
Clole_2596	SSF56037	PheT/TilS domain
Clole_2597	SSF46589	tRNA-binding arm
Clole_2597	SSF55681	Class II aaRS and biotin synthetases
Clole_2598	SSF51445	(Trans)glycosidases
Clole_2598	SSF63446	Type I dockerin domain
Clole_2599	SSF49384	Carbohydrate-binding domain
Clole_2599	SSF81296	E set domains
Clole_2600	SSF53784	Phosphofructokinase
Clole_2602	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
Clole_2602	SSF51735	NAD(P)-binding Rossmann-fold domains
Clole_2602	SSF55021	ACT-like
Clole_2603	SSF55383	Copper amine oxidase, domain N
Clole_2604	SSF46609	Fe,Mn superoxide dismutase (SOD), N-terminal domain
Clole_2604	SSF54719	Fe,Mn superoxide dismutase (SOD), C-terminal domain
Clole_2605	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_2606	SSF56784	HAD-like
Clole_2607	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Clole_2608	SSF109604	HD-domain/PDEase-like
Clole_2609	SSF47240	Ferritin-like
Clole_2612	SSF54506	Diaminopimelate epimerase-like
Clole_2614	SSF46689	Homeodomain-like
Clole_2614	SSF48295	TrpR-like
Clole_2616	SSF81301	Nucleotidyltransferase
Clole_2616	SSF81631	PAP/OAS1 substrate-binding domain
Clole_2618	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_2620	SSF53041	Resolvase-like
Clole_2624	SSF56731	DNA primase core
Clole_2624	SSF57783	Zinc beta-ribbon
Clole_2626	SSF47413	lambda repressor-like DNA-binding domains
Clole_2627	SSF47413	lambda repressor-like DNA-binding domains
Clole_2628	SSF56349	DNA breaking-rejoining enzymes
Clole_2631	SSF50249	Nucleic acid-binding proteins
Clole_2632	SSF158682	TerB-like
Clole_2632	SSF46565	Chaperone J-domain
Clole_2633	SSF51569	Aldolase
Clole_2636	SSF46785	"Winged helix" DNA-binding domain
Clole_2636	SSF53850	Periplasmic binding protein-like II
Clole_2637	SSF56784	HAD-like
Clole_2639	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_2640	SSF53448	Nucleotide-diphospho-sugar transferases
Clole_2641	SSF48371	ARM repeat
Clole_2642	SSF51445	(Trans)glycosidases
Clole_2645	SSF111369	HlyD-like secretion proteins
Clole_2646	SSF161098	MetI-like
Clole_2647	SSF161098	MetI-like
Clole_2648	SSF50969	YVTN repeat-like/Quinoprotein amine dehydrogenase
Clole_2648	SSF53850	Periplasmic binding protein-like II
Clole_2649	SSF46894	C-terminal effector domain of the bipartite response regulators
Clole_2649	SSF52172	CheY-like
Clole_2650	SSF47384	Homodimeric domain of signal transducing histidine kinase
Clole_2650	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Clole_2651	SSF55298	YjgF-like
Clole_2654	SSF51735	NAD(P)-binding Rossmann-fold domains
Clole_2654	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
Clole_2655	SSF56634	Heme-dependent catalase-like
Clole_2656	SSF55021	ACT-like
Clole_2657	SSF102114	Radical SAM enzymes
Clole_2658	SSF102114	Radical SAM enzymes
Clole_2659	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_2661	SSF143548	Serine metabolism enzymes domain
Clole_2661	SSF55021	ACT-like
Clole_2665	SSF144091	Rhomboid-like
Clole_2666	SSF51306	LexA/Signal peptidase
Clole_2666	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_2667	SSF49764	HSP20-like chaperones
Clole_2668	SSF52343	Ferredoxin reductase-like, C-terminal NADP-linked domain
Clole_2668	SSF63380	Riboflavin synthase domain-like
Clole_2669	SSF56954	Outer membrane efflux proteins (OEP)
Clole_2670	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_2672	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
Clole_2674	SSF56059	Glutathione synthetase ATP-binding domain-like
Clole_2676	SSF51011	Glycosyl hydrolase domain
Clole_2676	SSF51445	(Trans)glycosidases
Clole_2676	SSF74650	Galactose mutarotase-like
Clole_2677	SSF110296	Oligoxyloglucan reducing end-specific cellobiohydrolase
Clole_2683	SSF46785	"Winged helix" DNA-binding domain
Clole_2683	SSF53850	Periplasmic binding protein-like II
Clole_2684	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
Clole_2685	SSF56796	Dehydroquinate synthase-like
Clole_2686	SSF46785	"Winged helix" DNA-binding domain
Clole_2686	SSF53850	Periplasmic binding protein-like II
Clole_2687	SSF50182	Sm-like ribonucleoproteins
Clole_2688	SSF46785	"Winged helix" DNA-binding domain
Clole_2688	SSF48008	GntR ligand-binding domain-like
Clole_2691	SSF50729	PH domain-like
Clole_2693	SSF46548	alpha-helical ferredoxin
Clole_2694	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Clole_2695	SSF52833	Thioredoxin-like
Clole_2697	SSF53300	vWA-like
Clole_2698	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_2700	SSF47644	Methionine synthase domain
Clole_2700	SSF51717	Dihydropteroate synthetase-like
Clole_2700	SSF52242	Cobalamin (vitamin B12)-binding domain
Clole_2700	SSF56507	Methionine synthase activation domain-like
Clole_2700	SSF82282	Homocysteine S-methyltransferase
Clole_2701	SSF103481	Multidrug resistance efflux transporter EmrE
Clole_2702	SSF81330	Gated mechanosensitive channel
Clole_2703	SSF56784	HAD-like
Clole_2704	SSF56796	Dehydroquinate synthase-like
Clole_2705	SSF56821	Prismane protein-like
Clole_2708	SSF49384	Carbohydrate-binding domain
Clole_2708	SSF50370	Ricin B-like lectins
Clole_2708	SSF53474	alpha/beta-Hydrolases
Clole_2709	SSF46689	Homeodomain-like
Clole_2709	SSF51215	Regulatory protein AraC
Clole_2711	SSF52218	Flavoproteins
Clole_2711	SSF54862	4Fe-4S ferredoxins
Clole_2713	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
Clole_2714	SSF52121	Lumazine synthase
Clole_2715	SSF142695	RibA-like
Clole_2715	SSF55821	YrdC/RibB
Clole_2716	SSF63380	Riboflavin synthase domain-like
Clole_2717	SSF53597	Dihydrofolate reductase-like
Clole_2717	SSF53927	Cytidine deaminase-like
Clole_2718	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
Clole_2718	SSF51735	NAD(P)-binding Rossmann-fold domains
Clole_2719	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_2720	SSF50037	C-terminal domain of transcriptional repressors
Clole_2723	SSF47240	Ferritin-like
Clole_2725	SSF52743	Subtilisin-like
Clole_2726	SSF52743	Subtilisin-like
Clole_2727	SSF52743	Subtilisin-like
Clole_2730	SSF53098	Ribonuclease H-like
Clole_2733	SSF55166	Hedgehog/DD-peptidase
Clole_2742	SSF160719	gpW/gp25-like
Clole_2744	SSF69279	Phage tail proteins
Clole_2745	SSF54106	LysM domain
Clole_2749	SSF69279	Phage tail proteins
Clole_2767	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
Clole_2768	SSF56349	DNA breaking-rejoining enzymes
Clole_2769	SSF159006	YopX-like
Clole_2779	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Clole_2782	SSF55979	DNA clamp
Clole_2784	SSF103084	Holliday junction resolvase RusA
Clole_2785	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_2789	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_2793	SSF47413	lambda repressor-like DNA-binding domains
Clole_2800	SSF47413	lambda repressor-like DNA-binding domains
Clole_2801	SSF47413	lambda repressor-like DNA-binding domains
Clole_2803	SSF53041	Resolvase-like
Clole_2804	SSF47240	Ferritin-like
Clole_2805	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Clole_2807	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Clole_2808	SSF50475	FMN-binding split barrel
Clole_2811	SSF51126	Pectin lyase-like
Clole_2813	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_2816	SSF56672	DNA/RNA polymerases
Clole_2817	SSF46785	"Winged helix" DNA-binding domain
Clole_2819	SSF74982	Small protein B (SmpB)
Clole_2820	SSF103481	Multidrug resistance efflux transporter EmrE
Clole_2824	SSF51905	FAD/NAD(P)-binding domain
Clole_2824	SSF55424	FAD/NAD-linked reductases, dimerisation (C-terminal) domain
Clole_2825	SSF55846	N-acetylmuramoyl-L-alanine amidase-like
Clole_2826	SSF50249	Nucleic acid-binding proteins
Clole_2829	SSF51604	Enolase C-terminal domain-like
Clole_2829	SSF54826	Enolase N-terminal domain-like
Clole_2831	SSF55383	Copper amine oxidase, domain N
Clole_2832	SSF53649	Alkaline phosphatase-like
Clole_2832	SSF64158	2,3-Bisphosphoglycerate-independent phosphoglycerate mutase, substrate-binding domain
Clole_2833	SSF51351	Triosephosphate isomerase (TIM)
Clole_2834	SSF53748	Phosphoglycerate kinase
Clole_2835	SSF51735	NAD(P)-binding Rossmann-fold domains
Clole_2835	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
Clole_2836	SSF100950	NagB/RpiA/CoA transferase-like
Clole_2836	SSF46785	"Winged helix" DNA-binding domain
Clole_2837	SSF109755	PhoU-like
Clole_2838	SSF109755	PhoU-like
Clole_2839	SSF52402	Adenine nucleotide alpha hydrolases-like
Clole_2840	SSF82649	SufE/NifU
Clole_2841	SSF53383	PLP-dependent transferases
Clole_2842	SSF46785	"Winged helix" DNA-binding domain
Clole_2843	SSF51445	(Trans)glycosidases
Clole_2845	SSF101478	ADP-ribosylglycohydrolase
Clole_2846	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
Clole_2847	SSF52467	DHS-like NAD/FAD-binding domain
Clole_2847	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
Clole_2848	SSF143975	IlvD/EDD N-terminal domain-like
Clole_2848	SSF52016	LeuD/IlvD-like
Clole_2849	SSF56752	D-aminoacid aminotransferase-like PLP-dependent enzymes
Clole_2850	SSF53659	Isocitrate/Isopropylmalate dehydrogenase-like
Clole_2852	SSF52016	LeuD/IlvD-like
Clole_2855	SSF110921	2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain
Clole_2855	SSF51569	Aldolase
Clole_2856	SSF110921	2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain
Clole_2856	SSF51569	Aldolase
Clole_2857	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
Clole_2857	SSF51735	NAD(P)-binding Rossmann-fold domains
Clole_2858	SSF55021	ACT-like
Clole_2859	SSF52467	DHS-like NAD/FAD-binding domain
Clole_2859	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
Clole_2860	SSF50447	Translation proteins
Clole_2860	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_2860	SSF54980	EF-G C-terminal domain-like
Clole_2861	SSF46689	Homeodomain-like
Clole_2861	SSF51215	Regulatory protein AraC
Clole_2862	SSF54862	4Fe-4S ferredoxins
Clole_2863	SSF49384	Carbohydrate-binding domain
Clole_2863	SSF51445	(Trans)glycosidases
Clole_2864	SSF49384	Carbohydrate-binding domain
Clole_2864	SSF50370	Ricin B-like lectins
Clole_2864	SSF51445	(Trans)glycosidases
Clole_2865	SSF49384	Carbohydrate-binding domain
Clole_2865	SSF53474	alpha/beta-Hydrolases
Clole_2866	SSF46689	Homeodomain-like
Clole_2866	SSF48295	TrpR-like
Clole_2867	SSF53098	Ribonuclease H-like
Clole_2868	SSF56712	Prokaryotic type I DNA topoisomerase
Clole_2870	SSF52777	CoA-dependent acyltransferases
Clole_2871	SSF50475	FMN-binding split barrel
Clole_2876	SSF54909	Dimeric alpha+beta barrel
Clole_2879	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Clole_2882	SSF52317	Class I glutamine amidotransferase-like
Clole_2883	SSF81301	Nucleotidyltransferase
Clole_2885	SSF48019	post-AAA+ oligomerization domain-like
Clole_2885	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_2886	SSF46785	"Winged helix" DNA-binding domain
Clole_2887	SSF50621	Alanine racemase C-terminal domain-like
Clole_2887	SSF51419	PLP-binding barrel
Clole_2888	SSF103190	Sensory domain-like
Clole_2888	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
Clole_2889	SSF47240	Ferritin-like
Clole_2890	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
Clole_2892	SSF82153	FAS1 domain
Clole_2894	SSF53098	Ribonuclease H-like
Clole_2895	SSF46785	"Winged helix" DNA-binding domain
Clole_2896	SSF56601	beta-lactamase/transpeptidase-like
Clole_2900	SSF51713	tRNA-guanine transglycosylase
Clole_2901	SSF103263	Chorismate synthase, AroC
Clole_2908	SSF56024	Phospholipase D/nuclease
Clole_2909	SSF54001	Cysteine proteinases
Clole_2911	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
Clole_2912	SSF111337	QueA-like
Clole_2913	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Clole_2916	SSF55120	Pseudouridine synthase
Clole_2916	SSF55174	Alpha-L RNA-binding motif
Clole_2922	SSF55594	HPr-like
Clole_2923	SSF55608	Homing endonucleases
Clole_2924	SSF142338	CofD-like
Clole_2925	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_2926	SSF56176	FAD-binding/transporter-associated domain-like
Clole_2926	SSF56194	Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase, MurB, C-terminal domain
Clole_2927	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_2928	SSF56300	Metallo-dependent phosphatases
Clole_2929	SSF53474	alpha/beta-Hydrolases
Clole_2930	SSF75169	DsrEFH-like
Clole_2932	SSF53850	Periplasmic binding protein-like II
Clole_2933	SSF161098	MetI-like
Clole_2934	SSF161098	MetI-like
Clole_2935	SSF50331	MOP-like
Clole_2935	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_2936	SSF47413	lambda repressor-like DNA-binding domains
Clole_2936	SSF51182	RmlC-like cupins
Clole_2937	SSF56954	Outer membrane efflux proteins (OEP)
Clole_2940	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_2941	SSF111369	HlyD-like secretion proteins
Clole_2943	SSF49452	Starch-binding domain-like
Clole_2943	SSF51445	(Trans)glycosidases
Clole_2943	SSF81296	E set domains
Clole_2945	SSF74731	Ribosomal protein L20
Clole_2946	SSF143034	L35p-like
Clole_2947	SSF54364	Translation initiation factor IF3, N-terminal domain
Clole_2947	SSF55200	Translation initiation factor IF3, C-terminal domain
Clole_2948	SSF52954	Class II aaRS ABD-related
Clole_2948	SSF55186	ThrRS/AlaRS common domain
Clole_2948	SSF55681	Class II aaRS and biotin synthetases
Clole_2948	SSF81271	TGS-like
Clole_2951	SSF118352	HSP33 redox switch-like
Clole_2951	SSF64397	Hsp33 domain
Clole_2952	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Clole_2953	SSF54631	CBS-domain pair
Clole_2953	SSF56176	FAD-binding/transporter-associated domain-like
Clole_2955	SSF51569	Aldolase
Clole_2956	SSF51735	NAD(P)-binding Rossmann-fold domains
Clole_2956	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
Clole_2957	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_2959	SSF50249	Nucleic acid-binding proteins
Clole_2960	SSF140500	BAS1536-like
Clole_2961	SSF88713	Glycoside hydrolase/deacetylase
Clole_2962	SSF51658	Xylose isomerase-like
Clole_2963	SSF54001	Cysteine proteinases
Clole_2964	SSF54001	Cysteine proteinases
Clole_2965	SSF74650	Galactose mutarotase-like
Clole_2966	SSF47413	lambda repressor-like DNA-binding domains
Clole_2966	SSF53822	Periplasmic binding protein-like I
Clole_2967	SSF54211	Ribosomal protein S5 domain 2-like
Clole_2967	SSF55060	GHMP Kinase, C-terminal domain
Clole_2968	SSF51735	NAD(P)-binding Rossmann-fold domains
Clole_2971	SSF51011	Glycosyl hydrolase domain
Clole_2971	SSF51445	(Trans)glycosidases
Clole_2972	SSF161098	MetI-like
Clole_2973	SSF160964	MalF N-terminal region-like
Clole_2973	SSF161098	MetI-like
Clole_2974	SSF53850	Periplasmic binding protein-like II
Clole_2975	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
Clole_2976	SSF89550	PHP domain-like
Clole_2977	SSF51011	Glycosyl hydrolase domain
Clole_2977	SSF51445	(Trans)glycosidases
Clole_2978	SSF46689	Homeodomain-like
Clole_2979	SSF47831	Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain
Clole_2979	SSF51621	Phosphoenolpyruvate/pyruvate domain
Clole_2979	SSF52009	Phosphohistidine domain
Clole_2980	SSF55594	HPr-like
Clole_2981	SSF47240	Ferritin-like
Clole_2981	SSF57802	Rubredoxin-like
Clole_2984	SSF53720	ALDH-like
Clole_2985	SSF47781	RuvA domain 2-like
Clole_2985	SSF50249	Nucleic acid-binding proteins
Clole_2985	SSF52113	BRCT domain
Clole_2985	SSF56091	DNA ligase/mRNA capping enzyme, catalytic domain
Clole_2987	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_2988	SSF48295	TrpR-like
Clole_2989	SSF89550	PHP domain-like
Clole_2991	SSF52374	Nucleotidylyl transferase
Clole_2992	SSF63411	LuxS/MPP-like metallohydrolase
Clole_2993	SSF53098	Ribonuclease H-like
Clole_2994	SSF46689	Homeodomain-like
Clole_2994	SSF48295	TrpR-like
Clole_2997	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_2998	SSF161187	YfgJ-like
Clole_2999	SSF56300	Metallo-dependent phosphatases
Clole_3000	SSF69765	IpsF-like
Clole_3001	SSF56784	HAD-like
Clole_3006	SSF55811	Nudix
Clole_3008	SSF54862	4Fe-4S ferredoxins
Clole_3009	SSF55136	Probable bacterial effector-binding domain
Clole_3010	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_3010	SSF54211	Ribosomal protein S5 domain 2-like
Clole_3012	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_3012	SSF81923	Double Clp-N motif
Clole_3015	SSF50118	Cell growth inhibitor/plasmid maintenance toxic component
Clole_3017	SSF50621	Alanine racemase C-terminal domain-like
Clole_3017	SSF51419	PLP-binding barrel
Clole_3019	SSF54631	CBS-domain pair
Clole_3020	SSF53613	Ribokinase-like
Clole_3020	SSF64153	YjeF N-terminal domain-like
Clole_3021	SSF56214	4'-phosphopantetheinyl transferase
Clole_3023	SSF53613	Ribokinase-like
Clole_3024	SSF47781	RuvA domain 2-like
Clole_3024	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_3025	SSF53098	Ribonuclease H-like
Clole_3026	SSF55383	Copper amine oxidase, domain N
Clole_3028	SSF52141	Uracil-DNA glycosylase-like
Clole_3029	SSF102114	Radical SAM enzymes
Clole_3030	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_3033	SSF46785	"Winged helix" DNA-binding domain
Clole_3033	SSF51735	NAD(P)-binding Rossmann-fold domains
Clole_3034	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_3037	SSF46785	"Winged helix" DNA-binding domain
Clole_3039	SSF51905	FAD/NAD(P)-binding domain
Clole_3039	SSF55424	FAD/NAD-linked reductases, dimerisation (C-terminal) domain
Clole_3040	SSF52949	Macro domain-like
Clole_3040	SSF53187	Zn-dependent exopeptidases
Clole_3041	SSF51182	RmlC-like cupins
Clole_3042	SSF88874	Receptor-binding domain of short tail fibre protein gp12
Clole_3044	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
Clole_3045	SSF52096	ClpP/crotonase
Clole_3046	SSF52096	ClpP/crotonase
Clole_3047	SSF51246	Rudiment single hybrid motif
Clole_3047	SSF52440	PreATP-grasp domain
Clole_3047	SSF56059	Glutathione synthetase ATP-binding domain-like
Clole_3048	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
Clole_3049	SSF51230	Single hybrid motif
Clole_3050	SSF53901	Thiolase-like
Clole_3051	SSF51735	NAD(P)-binding Rossmann-fold domains
Clole_3052	SSF52151	FabD/lysophospholipase-like
Clole_3052	SSF55048	Probable ACP-binding domain of malonyl-CoA ACP transacylase
Clole_3053	SSF51412	Inosine monophosphate dehydrogenase (IMPDH)
Clole_3054	SSF47336	ACP-like
Clole_3055	SSF53901	Thiolase-like
Clole_3056	SSF46785	"Winged helix" DNA-binding domain
Clole_3057	SSF51412	Inosine monophosphate dehydrogenase (IMPDH)
Clole_3058	SSF52141	Uracil-DNA glycosylase-like
Clole_3060	SSF102114	Radical SAM enzymes
Clole_3060	SSF47781	RuvA domain 2-like
Clole_3062	SSF52499	Isochorismatase-like hydrolases
Clole_3064	SSF46894	C-terminal effector domain of the bipartite response regulators
Clole_3064	SSF52172	CheY-like
Clole_3065	SSF47384	Homodimeric domain of signal transducing histidine kinase
Clole_3065	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Clole_3066	SSF47384	Homodimeric domain of signal transducing histidine kinase
Clole_3066	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Clole_3069	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Clole_3074	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_3075	SSF101821	Aminopeptidase/glucanase lid domain
Clole_3075	SSF53187	Zn-dependent exopeptidases
Clole_3076	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Clole_3078	SSF53098	Ribonuclease H-like
Clole_3082	SSF103473	MFS general substrate transporter
Clole_3084	SSF53649	Alkaline phosphatase-like
Clole_3085	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_3085	SSF90123	ABC transporter transmembrane region
Clole_3086	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_3086	SSF90123	ABC transporter transmembrane region
Clole_3087	SSF142906	YjbR-like
Clole_3088	SSF55469	FMN-dependent nitroreductase-like
Clole_3089	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Clole_3091	SSF141986	LD-carboxypeptidase A C-terminal domain-like
Clole_3091	SSF52317	Class I glutamine amidotransferase-like
Clole_3093	SSF52218	Flavoproteins
Clole_3094	SSF109604	HD-domain/PDEase-like
Clole_3096	SSF56112	Protein kinase-like (PK-like)
Clole_3099	SSF53383	PLP-dependent transferases
Clole_3100	SSF158472	HAMP domain-like
Clole_3106	SSF52833	Thioredoxin-like
Clole_3108	SSF51261	Duplicated hybrid motif
Clole_3109	SSF118215	Proton glutamate symport protein
Clole_3115	SSF55154	CYTH-like phosphatases
Clole_3117	SSF49303	beta-Galactosidase/glucuronidase domain
Clole_3117	SSF49785	Galactose-binding domain-like
Clole_3117	SSF51445	(Trans)glycosidases
Clole_3118	SSF50249	Nucleic acid-binding proteins
Clole_3119	SSF52266	SGNH hydrolase
Clole_3120	SSF56784	HAD-like
Clole_3122	SSF111038	YjbQ-like
Clole_3124	SSF102114	Radical SAM enzymes
Clole_3126	SSF46689	Homeodomain-like
Clole_3128	SSF51219	TRAP-like
Clole_3130	SSF47240	Ferritin-like
Clole_3131	SSF48168	R1 subunit of ribonucleotide reductase, N-terminal domain
Clole_3131	SSF51998	PFL-like glycyl radical enzymes
Clole_3132	SSF53927	Cytidine deaminase-like
Clole_3133	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
Clole_3135	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_3137	SSF46894	C-terminal effector domain of the bipartite response regulators
Clole_3137	SSF52172	CheY-like
Clole_3138	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Clole_3140	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_3142	SSF55073	Nucleotide cyclase
Clole_3144	SSF54862	4Fe-4S ferredoxins
Clole_3146	SSF53613	Ribokinase-like
Clole_3147	SSF51391	Thiamin phosphate synthase
Clole_3148	SSF53613	Ribokinase-like
Clole_3150	SSF51445	(Trans)glycosidases
Clole_3151	SSF46689	Homeodomain-like
Clole_3151	SSF51215	Regulatory protein AraC
Clole_3154	SSF49265	Fibronectin type III
Clole_3157	SSF52172	CheY-like
Clole_3158	SSF52172	CheY-like
Clole_3159	SSF52172	CheY-like
Clole_3161	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Clole_3165	SSF53041	Resolvase-like
Clole_3168	SSF52833	Thioredoxin-like
Clole_3169	SSF46785	"Winged helix" DNA-binding domain
Clole_3170	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
Clole_3172	SSF53187	Zn-dependent exopeptidases
Clole_3172	SSF55031	Bacterial exopeptidase dimerisation domain
Clole_3173	SSF141259	CarD-like
Clole_3175	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_3176	SSF52266	SGNH hydrolase
Clole_3177	SSF47240	Ferritin-like
Clole_3177	SSF57802	Rubredoxin-like
Clole_3178	SSF56112	Protein kinase-like (PK-like)
Clole_3180	SSF47413	lambda repressor-like DNA-binding domains
Clole_3180	SSF53822	Periplasmic binding protein-like I
Clole_3182	SSF69318	Integrin alpha N-terminal domain
Clole_3184	SSF49777	PEBP-like
Clole_3186	SSF46894	C-terminal effector domain of the bipartite response regulators
Clole_3186	SSF48452	TPR-like
Clole_3187	SSF46894	C-terminal effector domain of the bipartite response regulators
Clole_3187	SSF52172	CheY-like
Clole_3191	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_3192	SSF159501	EreA/ChaN-like
Clole_3194	SSF46955	Putative DNA-binding domain
Clole_3195	SSF52218	Flavoproteins
Clole_3196	SSF51182	RmlC-like cupins
Clole_3200	SSF56300	Metallo-dependent phosphatases
Clole_3201	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Clole_3202	SSF55383	Copper amine oxidase, domain N
Clole_3205	SSF53474	alpha/beta-Hydrolases
Clole_3206	SSF55826	YbaK/ProRS associated domain
Clole_3207	SSF53927	Cytidine deaminase-like
Clole_3208	SSF75569	Archaeal IMP cyclohydrolase PurO
Clole_3209	SSF103473	MFS general substrate transporter
Clole_3210	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_3211	SSF81345	ABC transporter involved in vitamin B12 uptake, BtuC
Clole_3212	SSF81345	ABC transporter involved in vitamin B12 uptake, BtuC
Clole_3213	SSF53807	"Helical backbone" metal receptor
Clole_3214	SSF56784	HAD-like
Clole_3215	SSF57802	Rubredoxin-like
Clole_3216	SSF53271	PRTase-like
Clole_3219	SSF56796	Dehydroquinate synthase-like
Clole_3220	SSF54001	Cysteine proteinases
Clole_3221	SSF52172	CheY-like
Clole_3222	SSF49785	Galactose-binding domain-like
Clole_3222	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Clole_3223	SSF56978	Perfringolysin
Clole_3224	SSF46785	"Winged helix" DNA-binding domain
Clole_3224	SSF53850	Periplasmic binding protein-like II
Clole_3225	SSF144010	CofE-like
Clole_3228	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Clole_3229	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Clole_3230	SSF56281	Metallo-hydrolase/oxidoreductase
Clole_3231	SSF55811	Nudix
Clole_3232	SSF103481	Multidrug resistance efflux transporter EmrE
Clole_3233	SSF48208	Six-hairpin glycosidases
Clole_3233	SSF74650	Galactose mutarotase-like
Clole_3236	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Clole_3238	SSF46785	"Winged helix" DNA-binding domain
Clole_3239	SSF116726	TrkA C-terminal domain-like
Clole_3240	SSF55816	5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain
Clole_3240	SSF56300	Metallo-dependent phosphatases
Clole_3241	SSF161098	MetI-like
Clole_3242	SSF161098	MetI-like
Clole_3243	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_3244	SSF53850	Periplasmic binding protein-like II
Clole_3245	SSF47413	lambda repressor-like DNA-binding domains
Clole_3245	SSF53822	Periplasmic binding protein-like I
Clole_3246	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_3246	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Clole_3247	SSF46689	Homeodomain-like
Clole_3248	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Clole_3250	SSF81345	ABC transporter involved in vitamin B12 uptake, BtuC
Clole_3251	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_3252	SSF53807	"Helical backbone" metal receptor
Clole_3256	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_3257	SSF50037	C-terminal domain of transcriptional repressors
Clole_3258	SSF50037	C-terminal domain of transcriptional repressors
Clole_3260	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_3261	SSF47384	Homodimeric domain of signal transducing histidine kinase
Clole_3261	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Clole_3263	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_3264	SSF52172	CheY-like
Clole_3265	SSF64005	Undecaprenyl diphosphate synthase
Clole_3267	SSF82549	DAK1/DegV-like
Clole_3268	SSF51338	Composite domain of metallo-dependent hydrolases
Clole_3268	SSF51556	Metallo-dependent hydrolases
Clole_3270	SSF46689	Homeodomain-like
Clole_3272	SSF46689	Homeodomain-like
Clole_3272	SSF55136	Probable bacterial effector-binding domain
Clole_3275	SSF110710	TTHA0583/YokD-like
Clole_3276	SSF144091	Rhomboid-like
Clole_3276	SSF48452	TPR-like
Clole_3277	SSF56801	Acetyl-CoA synthetase-like
Clole_3278	SSF46689	Homeodomain-like
Clole_3278	SSF48498	Tetracyclin repressor-like, C-terminal domain
Clole_3283	SSF82649	SufE/NifU
Clole_3284	SSF53383	PLP-dependent transferases
Clole_3285	SSF101960	Stabilizer of iron transporter SufD
Clole_3286	SSF101960	Stabilizer of iron transporter SufD
Clole_3287	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_3288	SSF51735	NAD(P)-binding Rossmann-fold domains
Clole_3289	SSF46689	Homeodomain-like
Clole_3289	SSF51215	Regulatory protein AraC
Clole_3290	SSF81301	Nucleotidyltransferase
Clole_3290	SSF81631	PAP/OAS1 substrate-binding domain
Clole_3292	SSF46689	Homeodomain-like
Clole_3292	SSF55136	Probable bacterial effector-binding domain
Clole_3293	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Clole_3294	SSF53474	alpha/beta-Hydrolases
Clole_3296	SSF46785	"Winged helix" DNA-binding domain
Clole_3298	SSF53474	alpha/beta-Hydrolases
Clole_3299	SSF47384	Homodimeric domain of signal transducing histidine kinase
Clole_3299	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Clole_3300	SSF52172	CheY-like
Clole_3301	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Clole_3301	SSF81799	Putative methyltransferase TM0872, insert domain
Clole_3302	SSF52402	Adenine nucleotide alpha hydrolases-like
Clole_3304	SSF56784	HAD-like
Clole_3304	SSF81653	Calcium ATPase, transduction domain A
Clole_3304	SSF81665	Calcium ATPase, transmembrane domain M
Clole_3305	SSF69572	Activating enzymes of the ubiquitin-like proteins
Clole_3306	SSF52833	Thioredoxin-like
Clole_3308	SSF111321	AF1104-like
Clole_3309	SSF55136	Probable bacterial effector-binding domain
Clole_3310	SSF161098	MetI-like
Clole_3311	SSF161098	MetI-like
Clole_3312	SSF53850	Periplasmic binding protein-like II
Clole_3314	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_3318	SSF54506	Diaminopimelate epimerase-like
Clole_3319	SSF56601	beta-lactamase/transpeptidase-like
Clole_3320	SSF46689	Homeodomain-like
Clole_3320	SSF55136	Probable bacterial effector-binding domain
Clole_3321	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Clole_3322	SSF46689	Homeodomain-like
Clole_3322	SSF48498	Tetracyclin repressor-like, C-terminal domain
Clole_3323	SSF49303	beta-Galactosidase/glucuronidase domain
Clole_3323	SSF49785	Galactose-binding domain-like
Clole_3323	SSF51445	(Trans)glycosidases
Clole_3325	SSF103473	MFS general substrate transporter
Clole_3326	SSF51445	(Trans)glycosidases
Clole_3328	SSF52317	Class I glutamine amidotransferase-like
Clole_3328	SSF52402	Adenine nucleotide alpha hydrolases-like
Clole_3329	SSF51412	Inosine monophosphate dehydrogenase (IMPDH)
Clole_3329	SSF54631	CBS-domain pair
Clole_3332	SSF48592	GroEL equatorial domain-like
Clole_3332	SSF52029	GroEL apical domain-like
Clole_3332	SSF54849	GroEL-intermediate domain like
Clole_3333	SSF50129	GroES-like
Clole_3334	SSF48150	DNA-glycosylase
Clole_3334	SSF55945	TATA-box binding protein-like
Clole_3339	SSF53448	Nucleotide-diphospho-sugar transferases
Clole_3342	SSF88723	PIN domain-like
Clole_3343	SSF53067	Actin-like ATPase domain
Clole_3345	SSF56281	Metallo-hydrolase/oxidoreductase
Clole_3346	SSF50037	C-terminal domain of transcriptional repressors
Clole_3347	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_3351	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_3355	SSF53738	Phosphoglucomutase, first 3 domains
Clole_3355	SSF55957	Phosphoglucomutase, C-terminal domain
Clole_3356	SSF53067	Actin-like ATPase domain
Clole_3357	SSF49265	Fibronectin type III
Clole_3357	SSF51055	Carbohydrate binding domain
Clole_3357	SSF51445	(Trans)glycosidases
Clole_3357	SSF81296	E set domains
Clole_3358	SSF74650	Galactose mutarotase-like
Clole_3359	SSF51445	(Trans)glycosidases
Clole_3360	SSF51182	RmlC-like cupins
Clole_3361	SSF75005	Arabinanase/levansucrase/invertase
Clole_3362	SSF48208	Six-hairpin glycosidases
Clole_3363	SSF75005	Arabinanase/levansucrase/invertase
Clole_3364	SSF46689	Homeodomain-like
Clole_3364	SSF51215	Regulatory protein AraC
Clole_3365	SSF47413	lambda repressor-like DNA-binding domains
Clole_3365	SSF53822	Periplasmic binding protein-like I
Clole_3366	SSF51445	(Trans)glycosidases
Clole_3367	SSF51445	(Trans)glycosidases
Clole_3368	SSF52266	SGNH hydrolase
Clole_3370	SSF143597	YojJ-like
Clole_3373	SSF51445	(Trans)glycosidases
Clole_3374	SSF50249	Nucleic acid-binding proteins
Clole_3374	SSF55681	Class II aaRS and biotin synthetases
Clole_3375	SSF46557	GreA transcript cleavage protein, N-terminal domain
Clole_3375	SSF54534	FKBP-like
Clole_3376	SSF51395	FMN-linked oxidoreductases
Clole_3377	SSF53067	Actin-like ATPase domain
Clole_3378	SSF102645	CoaB-like
Clole_3378	SSF52507	Homo-oligomeric flavin-containing Cys decarboxylases, HFCD
Clole_3381	SSF46785	"Winged helix" DNA-binding domain
Clole_3381	SSF50037	C-terminal domain of transcriptional repressors
Clole_3381	SSF55681	Class II aaRS and biotin synthetases
Clole_3382	SSF140990	FtsH protease domain-like
Clole_3382	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_3383	SSF53271	PRTase-like
Clole_3384	SSF52402	Adenine nucleotide alpha hydrolases-like
Clole_3384	SSF56037	PheT/TilS domain
Clole_3384	SSF82829	MesJ substrate recognition domain-like
Clole_3392	SSF49265	Fibronectin type III
Clole_3392	SSF49299	PKD domain
Clole_3393	SSF46689	Homeodomain-like
Clole_3393	SSF53098	Ribonuclease H-like
Clole_3395	SSF55383	Copper amine oxidase, domain N
Clole_3398	SSF49265	Fibronectin type III
Clole_3398	SSF49299	PKD domain
Clole_3398	SSF49464	Carboxypeptidase regulatory domain-like
Clole_3398	SSF63829	Calcium-dependent phosphotriesterase
Clole_3398	SSF69322	Tricorn protease domain 2
Clole_3399	SSF49265	Fibronectin type III
Clole_3400	SSF55383	Copper amine oxidase, domain N
Clole_3401	SSF81606	PP2C-like
Clole_3404	SSF75005	Arabinanase/levansucrase/invertase
Clole_3406	SSF161098	MetI-like
Clole_3407	SSF161098	MetI-like
Clole_3408	SSF53850	Periplasmic binding protein-like II
Clole_3409	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_3409	SSF81767	Pre-protein crosslinking domain of SecA
Clole_3409	SSF81886	Helical scaffold and wing domains of SecA
Clole_3410	SSF69754	Ribosome binding protein Y (YfiA homologue)
Clole_3412	SSF103481	Multidrug resistance efflux transporter EmrE
Clole_3413	SSF103190	Sensory domain-like
Clole_3413	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
Clole_3414	SSF49384	Carbohydrate-binding domain
Clole_3414	SSF49785	Galactose-binding domain-like
Clole_3414	SSF51445	(Trans)glycosidases
Clole_3417	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_3418	SSF52733	Nicotinate mononucleotide:5,6-dimethylbenzimidazole phosphoribosyltransferase (CobT)
Clole_3419	SSF53056	beta-carbonic anhydrase, cab
Clole_3420	SSF50891	Cyclophilin-like
Clole_3420	SSF55383	Copper amine oxidase, domain N
Clole_3422	SSF53383	PLP-dependent transferases
Clole_3424	SSF52317	Class I glutamine amidotransferase-like
Clole_3424	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_3425	SSF52317	Class I glutamine amidotransferase-like
Clole_3425	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_3427	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_3428	SSF46785	"Winged helix" DNA-binding domain
Clole_3430	SSF103190	Sensory domain-like
Clole_3430	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
Clole_3431	SSF57783	Zinc beta-ribbon
Clole_3431	SSF82057	Prokaryotic SH3-related domain
Clole_3432	SSF51735	NAD(P)-binding Rossmann-fold domains
Clole_3432	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
Clole_3433	SSF53383	PLP-dependent transferases
Clole_3434	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
Clole_3435	SSF52821	Rhodanese/Cell cycle control phosphatase
Clole_3437	SSF52821	Rhodanese/Cell cycle control phosphatase
Clole_3438	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_3438	SSF90123	ABC transporter transmembrane region
Clole_3439	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_3439	SSF90123	ABC transporter transmembrane region
Clole_3440	SSF55469	FMN-dependent nitroreductase-like
Clole_3441	SSF46785	"Winged helix" DNA-binding domain
Clole_3442	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_3442	SSF90123	ABC transporter transmembrane region
Clole_3443	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_3443	SSF90123	ABC transporter transmembrane region
Clole_3444	SSF46785	"Winged helix" DNA-binding domain
Clole_3444	SSF53850	Periplasmic binding protein-like II
Clole_3445	SSF46785	"Winged helix" DNA-binding domain
Clole_3450	SSF51011	Glycosyl hydrolase domain
Clole_3450	SSF51445	(Trans)glycosidases
Clole_3451	SSF55604	Glucose permease domain IIB
Clole_3452	SSF46785	"Winged helix" DNA-binding domain
Clole_3452	SSF64288	Chorismate lyase-like
Clole_3453	SSF54506	Diaminopimelate epimerase-like
Clole_3454	SSF160240	Cation efflux protein cytoplasmic domain-like
Clole_3454	SSF161111	Cation efflux protein transmembrane domain-like
Clole_3455	SSF52218	Flavoproteins
Clole_3456	SSF109604	HD-domain/PDEase-like
Clole_3457	SSF55383	Copper amine oxidase, domain N
Clole_3457	SSF56300	Metallo-dependent phosphatases
Clole_3458	SSF56784	HAD-like
Clole_3460	SSF55120	Pseudouridine synthase
Clole_3461	SSF109998	Triger factor/SurA peptide-binding domain-like
Clole_3461	SSF54534	FKBP-like
Clole_3461	SSF55383	Copper amine oxidase, domain N
Clole_3463	SSF55620	Tetrahydrobiopterin biosynthesis enzymes-like
Clole_3465	SSF102114	Radical SAM enzymes
Clole_3466	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Clole_3467	SSF53850	Periplasmic binding protein-like II
Clole_3468	SSF161098	MetI-like
Clole_3469	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_3473	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_3474	SSF161098	MetI-like
Clole_3475	SSF53850	Periplasmic binding protein-like II
Clole_3476	SSF54909	Dimeric alpha+beta barrel
Clole_3477	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Clole_3479	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
Clole_3481	SSF63411	LuxS/MPP-like metallohydrolase
Clole_3482	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
Clole_3482	SSF52922	TK C-terminal domain-like
Clole_3483	SSF54171	DNA-binding domain
Clole_3486	SSF46785	"Winged helix" DNA-binding domain
Clole_3487	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_3488	SSF101386	all-alpha NTP pyrophosphatases
Clole_3489	SSF52440	PreATP-grasp domain
Clole_3489	SSF56059	Glutathione synthetase ATP-binding domain-like
Clole_3491	SSF144091	Rhomboid-like
Clole_3492	SSF50156	PDZ domain-like
Clole_3493	SSF50156	PDZ domain-like
Clole_3493	SSF52096	ClpP/crotonase
Clole_3494	SSF50156	PDZ domain-like
Clole_3494	SSF52096	ClpP/crotonase
Clole_3495	SSF51261	Duplicated hybrid motif
Clole_3497	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_3498	SSF46689	Homeodomain-like
Clole_3499	SSF50331	MOP-like
Clole_3499	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_3501	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
Clole_3506	SSF51658	Xylose isomerase-like
Clole_3507	SSF51735	NAD(P)-binding Rossmann-fold domains
Clole_3510	SSF54211	Ribosomal protein S5 domain 2-like
Clole_3511	SSF52161	Ribosomal protein L13
Clole_3512	SSF55120	Pseudouridine synthase
Clole_3514	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_3515	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_3516	SSF64263	Prokaryotic ribosomal protein L17
Clole_3517	SSF47789	C-terminal domain of RNA polymerase alpha subunit
Clole_3517	SSF55257	RBP11-like subunits of RNA polymerase
Clole_3517	SSF56553	Insert subdomain of RNA polymerase alpha subunit
Clole_3518	SSF55174	Alpha-L RNA-binding motif
Clole_3519	SSF53137	Translational machinery components
Clole_3520	SSF46946	S13-like H2TH domain
Clole_3521	SSF57840	Ribosomal protein L36
Clole_3522	SSF50249	Nucleic acid-binding proteins
Clole_3523	SSF50104	Translation proteins SH3-like domain
Clole_3524	SSF55920	Creatinase/aminopeptidase
Clole_3525	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_3526	SSF103491	Preprotein translocase SecY subunit
Clole_3527	SSF52080	Ribosomal proteins L15p and L18e
Clole_3528	SSF55129	Ribosomal protein L30p/L7e
Clole_3529	SSF54211	Ribosomal protein S5 domain 2-like
Clole_3529	SSF54768	dsRNA-binding domain-like
Clole_3530	SSF53137	Translational machinery components
Clole_3531	SSF56053	Ribosomal protein L6
Clole_3532	SSF56047	Ribosomal protein S8
Clole_3533	SSF57716	Glucocorticoid receptor-like (DNA-binding domain)
Clole_3534	SSF55282	RL5-like
Clole_3535	SSF50104	Translation proteins SH3-like domain
Clole_3536	SSF50193	Ribosomal protein L14
Clole_3537	SSF50249	Nucleic acid-binding proteins
Clole_3538	SSF46561	Ribosomal protein L29 (L29p)
Clole_3539	SSF54686	Ribosomal protein L16p/L10e
Clole_3540	SSF54814	Prokaryotic type KH domain (KH-domain type II)
Clole_3540	SSF54821	Ribosomal protein S3 C-terminal domain
Clole_3541	SSF54843	Ribosomal protein L22
Clole_3542	SSF54570	Ribosomal protein S19
Clole_3543	SSF50104	Translation proteins SH3-like domain
Clole_3543	SSF50249	Nucleic acid-binding proteins
Clole_3544	SSF54189	Ribosomal proteins S24e, L23 and L15e
Clole_3545	SSF52166	Ribosomal protein L4
Clole_3546	SSF50447	Translation proteins
Clole_3547	SSF54999	Ribosomal protein S10
Clole_3548	SSF50447	Translation proteins
Clole_3548	SSF50465	EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
Clole_3548	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_3549	SSF50447	Translation proteins
Clole_3549	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_3549	SSF54211	Ribosomal protein S5 domain 2-like
Clole_3549	SSF54980	EF-G C-terminal domain-like
Clole_3550	SSF47973	Ribosomal protein S7
Clole_3551	SSF50249	Nucleic acid-binding proteins
Clole_3552	SSF55315	L30e-like
Clole_3555	SSF64484	beta and beta-prime subunits of DNA dependent RNA-polymerase
Clole_3556	SSF64484	beta and beta-prime subunits of DNA dependent RNA-polymerase
Clole_3557	SSF48300	Ribosomal protein L7/12, oligomerisation (N-terminal) domain
Clole_3557	SSF54736	ClpS-like
Clole_3558	SSF160369	Ribosomal protein L10-like
Clole_3559	SSF53383	PLP-dependent transferases
Clole_3560	SSF52440	PreATP-grasp domain
Clole_3560	SSF56059	Glutathione synthetase ATP-binding domain-like
Clole_3561	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Clole_3562	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
Clole_3563	SSF56808	Ribosomal protein L1
Clole_3564	SSF46906	Ribosomal protein L11, C-terminal domain
Clole_3564	SSF54747	Ribosomal L11/L12e N-terminal domain
Clole_3565	SSF50104	Translation proteins SH3-like domain
Clole_3565	SSF82679	N-utilization substance G protein NusG, N-terminal domain
Clole_3570	SSF53448	Nucleotide-diphospho-sugar transferases
Clole_3571	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
Clole_3572	SSF51269	AFP III-like domain
Clole_3572	SSF51569	Aldolase
Clole_3574	SSF48452	TPR-like
Clole_3574	SSF53649	Alkaline phosphatase-like
Clole_3575	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
Clole_3576	SSF56796	Dehydroquinate synthase-like
Clole_3577	SSF51621	Phosphoenolpyruvate/pyruvate domain
Clole_3577	SSF52374	Nucleotidylyl transferase
Clole_3578	SSF53448	Nucleotide-diphospho-sugar transferases
Clole_3579	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_3580	SSF48452	TPR-like
Clole_3580	SSF53649	Alkaline phosphatase-like
Clole_3581	SSF51161	Trimeric LpxA-like enzymes
Clole_3582	SSF51735	NAD(P)-binding Rossmann-fold domains
Clole_3583	SSF53448	Nucleotide-diphospho-sugar transferases
Clole_3583	SSF54631	CBS-domain pair
Clole_3584	SSF53383	PLP-dependent transferases
Clole_3588	SSF101116	Flagellar export chaperone FliS
Clole_3590	SSF160214	FlaG-like
Clole_3591	SSF64518	Phase 1 flagellin
Clole_3592	SSF117130	CsrA-like
Clole_3593	SSF141457	BH3618-like
Clole_3594	SSF64518	Phase 1 flagellin
Clole_3595	SSF64518	Phase 1 flagellin
Clole_3596	SSF64518	Phase 1 flagellin
Clole_3597	SSF140566	FlgN-like
Clole_3598	SSF101498	Anti-sigma factor FlgM
Clole_3600	SSF53271	PRTase-like
Clole_3601	SSF47781	RuvA domain 2-like
Clole_3601	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_3603	SSF55973	S-adenosylmethionine synthetase
Clole_3605	SSF117143	Flagellar hook protein flgE
Clole_3606	SSF117143	Flagellar hook protein flgE
Clole_3607	SSF53067	Actin-like ATPase domain
Clole_3609	SSF52266	SGNH hydrolase
Clole_3611	SSF51261	Duplicated hybrid motif
Clole_3613	SSF143842	YwmB-like
Clole_3614	SSF49265	Fibronectin type III
Clole_3616	SSF48150	DNA-glycosylase
Clole_3616	SSF55811	Nudix
Clole_3618	SSF46604	Epsilon subunit of F1F0-ATP synthase C-terminal domain
Clole_3618	SSF51344	Epsilon subunit of F1F0-ATP synthase N-terminal domain
Clole_3619	SSF47917	C-terminal domain of alpha and beta subunits of F1 ATP synthase
Clole_3619	SSF50615	N-terminal domain of alpha and beta subunits of F1 ATP synthase
Clole_3619	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_3620	SSF52943	ATP synthase (F1-ATPase), gamma subunit
Clole_3621	SSF47917	C-terminal domain of alpha and beta subunits of F1 ATP synthase
Clole_3621	SSF50615	N-terminal domain of alpha and beta subunits of F1 ATP synthase
Clole_3621	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_3622	SSF47928	N-terminal domain of the delta subunit of the F1F0-ATP synthase
Clole_3624	SSF81333	F1F0 ATP synthase subunit C
Clole_3625	SSF81333	F1F0 ATP synthase subunit C
Clole_3626	SSF81336	F1F0 ATP synthase subunit A
Clole_3629	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
Clole_3630	SSF55073	Nucleotide cyclase
Clole_3630	SSF55781	GAF domain-like
Clole_3631	SSF82549	DAK1/DegV-like
Clole_3632	SSF47644	Methionine synthase domain
Clole_3632	SSF51717	Dihydropteroate synthetase-like
Clole_3632	SSF52242	Cobalamin (vitamin B12)-binding domain
Clole_3632	SSF82282	Homocysteine S-methyltransferase
Clole_3633	SSF56507	Methionine synthase activation domain-like
Clole_3634	SSF51730	FAD-linked oxidoreductase
Clole_3635	SSF50486	FMT C-terminal domain-like
Clole_3638	SSF56024	Phospholipase D/nuclease
Clole_3640	SSF69593	Glycerol-3-phosphate (1)-acyltransferase
Clole_3641	SSF51690	Nicotinate/Quinolinate PRTase C-terminal domain-like
Clole_3641	SSF54675	Nicotinate/Quinolinate PRTase N-terminal domain-like
Clole_3642	SSF103481	Multidrug resistance efflux transporter EmrE
Clole_3643	SSF52172	CheY-like
Clole_3644	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Clole_3645	SSF52172	CheY-like
Clole_3647	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
Clole_3647	SSF50677	ValRS/IleRS/LeuRS editing domain
Clole_3647	SSF52374	Nucleotidylyl transferase
Clole_3649	SSF103190	Sensory domain-like
Clole_3649	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
Clole_3650	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
Clole_3651	SSF56801	Acetyl-CoA synthetase-like
Clole_3652	SSF53901	Thiolase-like
Clole_3653	SSF53383	PLP-dependent transferases
Clole_3654	SSF51569	Aldolase
Clole_3655	SSF53790	Tetrapyrrole methylase
Clole_3655	SSF69618	HemD-like
Clole_3656	SSF53850	Periplasmic binding protein-like II
Clole_3656	SSF54782	Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain
Clole_3657	SSF51735	NAD(P)-binding Rossmann-fold domains
Clole_3657	SSF69075	Glutamyl tRNA-reductase dimerization domain
Clole_3657	SSF69742	Glutamyl tRNA-reductase catalytic, N-terminal domain
Clole_3658	SSF53800	Chelatase
Clole_3660	SSF110296	Oligoxyloglucan reducing end-specific cellobiohydrolase
Clole_3660	SSF49384	Carbohydrate-binding domain
Clole_3660	SSF81296	E set domains
Clole_3661	SSF143865	CorA soluble domain-like
Clole_3661	SSF144083	Magnesium transport protein CorA, transmembrane region
Clole_3663	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_3663	SSF90123	ABC transporter transmembrane region
Clole_3665	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Clole_3666	SSF52172	CheY-like
Clole_3667	SSF48208	Six-hairpin glycosidases
Clole_3667	SSF49384	Carbohydrate-binding domain
Clole_3668	SSF48208	Six-hairpin glycosidases
Clole_3668	SSF49384	Carbohydrate-binding domain
Clole_3670	SSF100879	Lesion bypass DNA polymerase (Y-family), little finger domain
Clole_3670	SSF56672	DNA/RNA polymerases
Clole_3672	SSF55008	HMA, heavy metal-associated domain
Clole_3672	SSF56784	HAD-like
Clole_3672	SSF81653	Calcium ATPase, transduction domain A
Clole_3672	SSF81665	Calcium ATPase, transmembrane domain M
Clole_3674	SSF101821	Aminopeptidase/glucanase lid domain
Clole_3674	SSF53187	Zn-dependent exopeptidases
Clole_3676	SSF46785	"Winged helix" DNA-binding domain
Clole_3679	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
Clole_3680	SSF52402	Adenine nucleotide alpha hydrolases-like
Clole_3681	SSF49384	Carbohydrate-binding domain
Clole_3681	SSF50370	Ricin B-like lectins
Clole_3681	SSF69318	Integrin alpha N-terminal domain
Clole_3682	SSF55821	YrdC/RibB
Clole_3683	SSF89623	Ribose/Galactose isomerase RpiB/AlsB
Clole_3684	SSF53271	PRTase-like
Clole_3688	SSF52016	LeuD/IlvD-like
Clole_3688	SSF53732	Aconitase iron-sulfur domain
Clole_3689	SSF53850	Periplasmic binding protein-like II
Clole_3690	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Clole_3691	SSF52172	CheY-like
Clole_3692	SSF81301	Nucleotidyltransferase
Clole_3693	SSF89447	AbrB/MazE/MraZ-like
Clole_3696	SSF82185	Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain
Clole_3700	SSF109604	HD-domain/PDEase-like
Clole_3701	SSF111352	Ammonium transporter
Clole_3702	SSF54913	GlnB-like
Clole_3703	SSF52402	Adenine nucleotide alpha hydrolases-like
Clole_3703	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
Clole_3704	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_3705	SSF64182	DHH phosphoesterases
Clole_3706	SSF51445	(Trans)glycosidases
Clole_3706	SSF52317	Class I glutamine amidotransferase-like
Clole_3707	SSF52266	SGNH hydrolase
Clole_3716	SSF160424	BH3703-like
Clole_3718	SSF81296	E set domains
Clole_3719	SSF140453	EsxAB dimer-like
Clole_3720	SSF46689	Homeodomain-like
Clole_3720	SSF53098	Ribonuclease H-like
Clole_3722	SSF140453	EsxAB dimer-like
Clole_3724	SSF53474	alpha/beta-Hydrolases
Clole_3727	SSF55383	Copper amine oxidase, domain N
Clole_3728	SSF69360	Cell wall binding repeat
Clole_3729	SSF54001	Cysteine proteinases
Clole_3730	SSF140453	EsxAB dimer-like
Clole_3732	SSF55383	Copper amine oxidase, domain N
Clole_3734	SSF53955	Lysozyme-like
Clole_3734	SSF54001	Cysteine proteinases
Clole_3735	SSF140453	EsxAB dimer-like
Clole_3737	SSF55383	Copper amine oxidase, domain N
Clole_3738	SSF140453	EsxAB dimer-like
Clole_3739	SSF140453	EsxAB dimer-like
Clole_3741	SSF56747	Prim-pol domain
Clole_3747	SSF140453	EsxAB dimer-like
Clole_3749	SSF55383	Copper amine oxidase, domain N
Clole_3751	SSF55383	Copper amine oxidase, domain N
Clole_3755	SSF140453	EsxAB dimer-like
Clole_3756	SSF140453	EsxAB dimer-like
Clole_3757	SSF140453	EsxAB dimer-like
Clole_3758	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_3759	SSF63825	YWTD domain
Clole_3760	SSF54236	Ubiquitin-like
Clole_3766	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_3767	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_3769	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_3771	SSF55205	EPT/RTPC-like
Clole_3775	SSF158472	HAMP domain-like
Clole_3775	SSF47384	Homodimeric domain of signal transducing histidine kinase
Clole_3775	SSF55785	PYP-like sensor domain (PAS domain)
Clole_3775	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Clole_3776	SSF46894	C-terminal effector domain of the bipartite response regulators
Clole_3776	SSF52172	CheY-like
Clole_3777	SSF54106	LysM domain
Clole_3779	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
Clole_3782	SSF111331	NAD kinase/diacylglycerol kinase-like
Clole_3783	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_3784	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_3785	SSF161098	MetI-like
Clole_3786	SSF161098	MetI-like
Clole_3787	SSF53850	Periplasmic binding protein-like II
Clole_3788	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
Clole_3789	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
Clole_3790	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
Clole_3792	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
Clole_3792	SSF51735	NAD(P)-binding Rossmann-fold domains
Clole_3792	SSF52413	UDP-glucose/GDP-mannose dehydrogenase C-terminal domain
Clole_3793	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Clole_3795	SSF53448	Nucleotide-diphospho-sugar transferases
Clole_3797	SSF51735	NAD(P)-binding Rossmann-fold domains
Clole_3798	SSF53448	Nucleotide-diphospho-sugar transferases
Clole_3799	SSF53448	Nucleotide-diphospho-sugar transferases
Clole_3800	SSF51182	RmlC-like cupins
Clole_3801	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Clole_3802	SSF53383	PLP-dependent transferases
Clole_3807	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
Clole_3808	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
Clole_3810	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Clole_3811	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_3813	SSF53383	PLP-dependent transferases
Clole_3814	SSF51161	Trimeric LpxA-like enzymes
Clole_3815	SSF51735	NAD(P)-binding Rossmann-fold domains
Clole_3816	SSF51735	NAD(P)-binding Rossmann-fold domains
Clole_3817	SSF159283	Guanosine diphospho-D-mannose pyrophosphorylase/mannose-6-phosphate isomerase linker domain
Clole_3817	SSF53448	Nucleotide-diphospho-sugar transferases
Clole_3820	SSF55383	Copper amine oxidase, domain N
Clole_3821	SSF55383	Copper amine oxidase, domain N
Clole_3822	SSF55383	Copper amine oxidase, domain N
Clole_3823	SSF55383	Copper amine oxidase, domain N
Clole_3824	SSF88713	Glycoside hydrolase/deacetylase
Clole_3827	SSF53448	Nucleotide-diphospho-sugar transferases
Clole_3828	SSF50814	Lipocalins
Clole_3829	SSF52440	PreATP-grasp domain
Clole_3829	SSF56059	Glutathione synthetase ATP-binding domain-like
Clole_3831	SSF143422	Transposase IS200-like
Clole_3836	SSF47413	lambda repressor-like DNA-binding domains
Clole_3836	SSF53822	Periplasmic binding protein-like I
Clole_3837	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
Clole_3838	SSF51445	(Trans)glycosidases
Clole_3839	SSF161098	MetI-like
Clole_3840	SSF161098	MetI-like
Clole_3841	SSF53850	Periplasmic binding protein-like II
Clole_3842	SSF47413	lambda repressor-like DNA-binding domains
Clole_3842	SSF53822	Periplasmic binding protein-like I
Clole_3843	SSF53613	Ribokinase-like
Clole_3844	SSF52794	PTS system IIB component-like
Clole_3844	SSF55804	Phoshotransferase/anion transport protein
Clole_3845	SSF103190	Sensory domain-like
Clole_3845	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
Clole_3846	SSF53474	alpha/beta-Hydrolases
Clole_3847	SSF56024	Phospholipase D/nuclease
Clole_3848	SSF53474	alpha/beta-Hydrolases
Clole_3849	SSF52743	Subtilisin-like
Clole_3850	SSF51735	NAD(P)-binding Rossmann-fold domains
Clole_3850	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
Clole_3851	SSF51011	Glycosyl hydrolase domain
Clole_3851	SSF51445	(Trans)glycosidases
Clole_3851	SSF81296	E set domains
Clole_3852	SSF46689	Homeodomain-like
Clole_3855	SSF53613	Ribokinase-like
Clole_3856	SSF53613	Ribokinase-like
Clole_3857	SSF51569	Aldolase
Clole_3859	SSF55811	Nudix
Clole_3860	SSF47384	Homodimeric domain of signal transducing histidine kinase
Clole_3860	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Clole_3861	SSF46894	C-terminal effector domain of the bipartite response regulators
Clole_3861	SSF52172	CheY-like
Clole_3862	SSF55383	Copper amine oxidase, domain N
Clole_3862	SSF81853	Family 10 polysaccharide lyase
Clole_3865	SSF53649	Alkaline phosphatase-like
Clole_3866	SSF55073	Nucleotide cyclase
Clole_3867	SSF53720	ALDH-like
Clole_3867	SSF56796	Dehydroquinate synthase-like
Clole_3868	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
Clole_3869	SSF54001	Cysteine proteinases
Clole_3871	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_3872	SSF53244	MurD-like peptide ligases, peptide-binding domain
Clole_3872	SSF53623	MurD-like peptide ligases, catalytic domain
Clole_3876	SSF54909	Dimeric alpha+beta barrel
Clole_3877	SSF56214	4'-phosphopantetheinyl transferase
Clole_3879	SSF47336	ACP-like
Clole_3880	SSF56801	Acetyl-CoA synthetase-like
Clole_3881	SSF53448	Nucleotide-diphospho-sugar transferases
Clole_3882	SSF47336	ACP-like
Clole_3882	SSF52777	CoA-dependent acyltransferases
Clole_3882	SSF56801	Acetyl-CoA synthetase-like
Clole_3883	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_3883	SSF90123	ABC transporter transmembrane region
Clole_3885	SSF50475	FMN-binding split barrel
Clole_3886	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
Clole_3887	SSF50475	FMN-binding split barrel
Clole_3889	SSF46689	Homeodomain-like
Clole_3890	SSF103473	MFS general substrate transporter
Clole_3892	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
Clole_3892	SSF88946	Sigma2 domain of RNA polymerase sigma factors
Clole_3893	SSF46548	alpha-helical ferredoxin
Clole_3897	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Clole_3899	SSF46785	"Winged helix" DNA-binding domain
Clole_3902	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_3903	SSF48334	DNA repair protein MutS, domain III
Clole_3903	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_3904	SSF53300	vWA-like
Clole_3905	SSF141523	L,D-transpeptidase catalytic domain-like
Clole_3905	SSF143985	L,D-transpeptidase pre-catalytic domain-like
Clole_3906	SSF53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes
Clole_3907	SSF46689	Homeodomain-like
Clole_3908	SSF102114	Radical SAM enzymes
Clole_3910	SSF53613	Ribokinase-like
Clole_3911	SSF46785	"Winged helix" DNA-binding domain
Clole_3911	SSF53383	PLP-dependent transferases
Clole_3913	SSF49265	Fibronectin type III
Clole_3913	SSF55383	Copper amine oxidase, domain N
Clole_3915	SSF51971	Nucleotide-binding domain
Clole_3921	SSF56601	beta-lactamase/transpeptidase-like
Clole_3922	SSF51445	(Trans)glycosidases
Clole_3923	SSF51261	Duplicated hybrid motif
Clole_3923	SSF55604	Glucose permease domain IIB
Clole_3924	SSF50151	SacY-like RNA-binding domain
Clole_3924	SSF63520	PTS-regulatory domain, PRD
Clole_3927	SSF143990	YbiA-like
Clole_3928	SSF52374	Nucleotidylyl transferase
Clole_3928	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_3930	SSF46785	"Winged helix" DNA-binding domain
Clole_3930	SSF55811	Nudix
Clole_3931	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
Clole_3931	SSF88946	Sigma2 domain of RNA polymerase sigma factors
Clole_3934	SSF103088	OmpA-like
Clole_3936	SSF50715	Ribosomal protein L25-like
Clole_3937	SSF103473	MFS general substrate transporter
Clole_3939	SSF46894	C-terminal effector domain of the bipartite response regulators
Clole_3939	SSF52172	CheY-like
Clole_3940	SSF47384	Homodimeric domain of signal transducing histidine kinase
Clole_3940	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Clole_3942	SSF49503	Cupredoxins
Clole_3942	SSF55008	HMA, heavy metal-associated domain
Clole_3944	SSF55008	HMA, heavy metal-associated domain
Clole_3945	SSF55008	HMA, heavy metal-associated domain
Clole_3945	SSF56784	HAD-like
Clole_3945	SSF81653	Calcium ATPase, transduction domain A
Clole_3945	SSF81665	Calcium ATPase, transmembrane domain M
Clole_3946	SSF49384	Carbohydrate-binding domain
Clole_3946	SSF50370	Ricin B-like lectins
Clole_3946	SSF51011	Glycosyl hydrolase domain
Clole_3946	SSF51445	(Trans)glycosidases
Clole_3947	SSF49384	Carbohydrate-binding domain
Clole_3947	SSF49785	Galactose-binding domain-like
Clole_3947	SSF50370	Ricin B-like lectins
Clole_3947	SSF75005	Arabinanase/levansucrase/invertase
Clole_3948	SSF46785	"Winged helix" DNA-binding domain
Clole_3952	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Clole_3953	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Clole_3954	SSF53681	Aspartate/glutamate racemase
Clole_3955	SSF141571	Pentapeptide repeat-like
Clole_3956	SSF51658	Xylose isomerase-like
Clole_3957	SSF56784	HAD-like
Clole_3958	SSF53720	ALDH-like
Clole_3960	SSF53795	PEP carboxykinase-like
Clole_3961	SSF52255	N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE)
Clole_3965	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_3966	SSF46955	Putative DNA-binding domain
Clole_3967	SSF54909	Dimeric alpha+beta barrel
Clole_3970	SSF46689	Homeodomain-like
Clole_3970	SSF51215	Regulatory protein AraC
Clole_3971	SSF51735	NAD(P)-binding Rossmann-fold domains
Clole_3971	SSF56327	LDH C-terminal domain-like
Clole_3974	SSF56801	Acetyl-CoA synthetase-like
Clole_3975	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Clole_3976	SSF51445	(Trans)glycosidases
Clole_3977	SSF49899	Concanavalin A-like lectins/glucanases
Clole_3977	SSF50370	Ricin B-like lectins
Clole_3978	SSF48208	Six-hairpin glycosidases
Clole_3979	SSF49785	Galactose-binding domain-like
Clole_3979	SSF49899	Concanavalin A-like lectins/glucanases
Clole_3981	SSF49899	Concanavalin A-like lectins/glucanases
Clole_3982	SSF53850	Periplasmic binding protein-like II
Clole_3983	SSF161098	MetI-like
Clole_3984	SSF161098	MetI-like
Clole_3985	SSF53850	Periplasmic binding protein-like II
Clole_3986	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Clole_3987	SSF46689	Homeodomain-like
Clole_3987	SSF52172	CheY-like
Clole_3988	SSF48208	Six-hairpin glycosidases
Clole_3989	SSF48208	Six-hairpin glycosidases
Clole_3989	SSF74650	Galactose mutarotase-like
Clole_3990	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
Clole_3993	SSF55021	ACT-like
Clole_3995	SSF81301	Nucleotidyltransferase
Clole_3996	SSF52009	Phosphohistidine domain
Clole_3996	SSF56059	Glutathione synthetase ATP-binding domain-like
Clole_3997	SSF56784	HAD-like
Clole_3998	SSF52777	CoA-dependent acyltransferases
Clole_4001	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Clole_4002	SSF54909	Dimeric alpha+beta barrel
Clole_4003	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
Clole_4004	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_4004	SSF90123	ABC transporter transmembrane region
Clole_4005	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_4005	SSF90123	ABC transporter transmembrane region
Clole_4006	SSF46955	Putative DNA-binding domain
Clole_4006	SSF55136	Probable bacterial effector-binding domain
Clole_4007	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_4009	SSF53822	Periplasmic binding protein-like I
Clole_4011	SSF48295	TrpR-like
Clole_4012	SSF53098	Ribonuclease H-like
Clole_4014	SSF56281	Metallo-hydrolase/oxidoreductase
Clole_4016	SSF55811	Nudix
Clole_4017	SSF53187	Zn-dependent exopeptidases
Clole_4019	SSF47413	lambda repressor-like DNA-binding domains
Clole_4021	SSF47413	lambda repressor-like DNA-binding domains
Clole_4023	SSF51735	NAD(P)-binding Rossmann-fold domains
Clole_4025	SSF53720	ALDH-like
Clole_4026	SSF52833	Thioredoxin-like
Clole_4027	SSF51905	FAD/NAD(P)-binding domain
Clole_4027	SSF52833	Thioredoxin-like
Clole_4028	SSF52317	Class I glutamine amidotransferase-like
Clole_4029	SSF51658	Xylose isomerase-like
Clole_4031	SSF63817	Sortase
Clole_4035	SSF53850	Periplasmic binding protein-like II
Clole_4036	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_4037	SSF161098	MetI-like
Clole_4038	SSF53920	Fe-only hydrogenase
Clole_4039	SSF50475	FMN-binding split barrel
Clole_4040	SSF56784	HAD-like
Clole_4042	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_4043	SSF47384	Homodimeric domain of signal transducing histidine kinase
Clole_4043	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Clole_4044	SSF52172	CheY-like
Clole_4045	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
Clole_4047	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_4049	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
Clole_4049	SSF88946	Sigma2 domain of RNA polymerase sigma factors
Clole_4052	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_4052	SSF90123	ABC transporter transmembrane region
Clole_4053	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_4053	SSF90123	ABC transporter transmembrane region
Clole_4056	SSF46785	"Winged helix" DNA-binding domain
Clole_4057	SSF51905	FAD/NAD(P)-binding domain
Clole_4059	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
Clole_4059	SSF88946	Sigma2 domain of RNA polymerase sigma factors
Clole_4061	SSF46955	Putative DNA-binding domain
Clole_4061	SSF55136	Probable bacterial effector-binding domain
Clole_4063	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_4064	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Clole_4070	SSF47090	PGBD-like
Clole_4072	SSF102114	Radical SAM enzymes
Clole_4073	SSF81296	E set domains
Clole_4074	SSF46689	Homeodomain-like
Clole_4076	SSF52499	Isochorismatase-like hydrolases
Clole_4077	SSF52833	Thioredoxin-like
Clole_4078	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_4078	SSF90123	ABC transporter transmembrane region
Clole_4079	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_4079	SSF90123	ABC transporter transmembrane region
Clole_4080	SSF51182	RmlC-like cupins
Clole_4082	SSF143414	CcmK-like
Clole_4083	SSF159133	EutN/CcmL-like
Clole_4086	SSF89028	Cobalamin adenosyltransferase-like
Clole_4087	SSF143414	CcmK-like
Clole_4088	SSF53720	ALDH-like
Clole_4089	SSF143414	CcmK-like
Clole_4090	SSF143414	CcmK-like
Clole_4093	SSF53067	Actin-like ATPase domain
Clole_4094	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_4095	SSF143414	CcmK-like
Clole_4096	SSF56796	Dehydroquinate synthase-like
Clole_4098	SSF51338	Composite domain of metallo-dependent hydrolases
Clole_4098	SSF51556	Metallo-dependent hydrolases
Clole_4100	SSF52218	Flavoproteins
Clole_4101	SSF52218	Flavoproteins
Clole_4102	SSF46689	Homeodomain-like
Clole_4102	SSF48498	Tetracyclin repressor-like, C-terminal domain
Clole_4103	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_4103	SSF90123	ABC transporter transmembrane region
Clole_4104	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_4104	SSF90123	ABC transporter transmembrane region
Clole_4105	SSF56601	beta-lactamase/transpeptidase-like
Clole_4106	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_4108	SSF47384	Homodimeric domain of signal transducing histidine kinase
Clole_4108	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Clole_4109	SSF50952	Soluble quinoprotein glucose dehydrogenase
Clole_4110	SSF158430	Bacillus cereus metalloprotein-like
Clole_4117	SSF55383	Copper amine oxidase, domain N
Clole_4121	SSF75217	alpha/beta knot
Clole_4122	SSF103190	Sensory domain-like
Clole_4122	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
Clole_4125	SSF103473	MFS general substrate transporter
Clole_4126	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_4126	SSF90123	ABC transporter transmembrane region
Clole_4127	SSF46785	"Winged helix" DNA-binding domain
Clole_4128	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_4130	SSF53822	Periplasmic binding protein-like I
Clole_4132	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Clole_4133	SSF53738	Phosphoglucomutase, first 3 domains
Clole_4133	SSF55957	Phosphoglucomutase, C-terminal domain
Clole_4135	SSF54211	Ribosomal protein S5 domain 2-like
Clole_4135	SSF55060	GHMP Kinase, C-terminal domain
Clole_4136	SSF54106	LysM domain
Clole_4139	SSF56112	Protein kinase-like (PK-like)
Clole_4141	SSF81301	Nucleotidyltransferase
Clole_4141	SSF81891	Poly A polymerase C-terminal region-like
Clole_4142	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_4143	SSF161098	MetI-like
Clole_4144	SSF53850	Periplasmic binding protein-like II
Clole_4145	SSF46934	UBA-like
Clole_4148	SSF53098	Ribonuclease H-like
Clole_4150	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Clole_4151	SSF53383	PLP-dependent transferases
Clole_4152	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
Clole_4154	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Clole_4154	SSF88697	PUA domain-like
Clole_4157	SSF54001	Cysteine proteinases
Clole_4159	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
Clole_4160	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
Clole_4160	SSF52922	TK C-terminal domain-like
Clole_4161	SSF54862	4Fe-4S ferredoxins
Clole_4162	SSF53323	Pyruvate-ferredoxin oxidoreductase, PFOR, domain III
Clole_4163	SSF56801	Acetyl-CoA synthetase-like
Clole_4164	SSF53383	PLP-dependent transferases
Clole_4165	SSF55103	FAD-linked oxidases, C-terminal domain
Clole_4165	SSF56176	FAD-binding/transporter-associated domain-like
Clole_4166	SSF53850	Periplasmic binding protein-like II
Clole_4167	SSF161098	MetI-like
Clole_4168	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_4168	SSF55021	ACT-like
Clole_4169	SSF53383	PLP-dependent transferases
Clole_4170	SSF53383	PLP-dependent transferases
Clole_4171	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Clole_4171	SSF53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes
Clole_4176	SSF49764	HSP20-like chaperones
Clole_4176	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_4178	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_4179	SSF46785	"Winged helix" DNA-binding domain
Clole_4180	SSF51206	cAMP-binding domain-like
Clole_4181	SSF51735	NAD(P)-binding Rossmann-fold domains
Clole_4182	SSF103481	Multidrug resistance efflux transporter EmrE
Clole_4183	SSF103365	Hypothetical protein PH1602
Clole_4187	SSF56281	Metallo-hydrolase/oxidoreductase
Clole_4188	SSF53300	vWA-like
Clole_4189	SSF46689	Homeodomain-like
Clole_4190	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_4193	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
Clole_4193	SSF88946	Sigma2 domain of RNA polymerase sigma factors
Clole_4195	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
Clole_4195	SSF88946	Sigma2 domain of RNA polymerase sigma factors
Clole_4197	SSF46785	"Winged helix" DNA-binding domain
Clole_4198	SSF47413	lambda repressor-like DNA-binding domains
Clole_4201	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_4202	SSF46785	"Winged helix" DNA-binding domain
Clole_4202	SSF53850	Periplasmic binding protein-like II
Clole_4203	SSF46689	Homeodomain-like
Clole_4203	SSF48498	Tetracyclin repressor-like, C-terminal domain
Clole_4204	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
Clole_4205	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Clole_4206	SSF50249	Nucleic acid-binding proteins
Clole_4206	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_4207	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_4208	SSF55811	Nudix
Clole_4209	SSF54197	HIT-like
Clole_4210	SSF102114	Radical SAM enzymes
Clole_4211	SSF56796	Dehydroquinate synthase-like
Clole_4212	SSF47384	Homodimeric domain of signal transducing histidine kinase
Clole_4212	SSF55785	PYP-like sensor domain (PAS domain)
Clole_4212	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Clole_4213	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_4213	SSF81923	Double Clp-N motif
Clole_4214	SSF54736	ClpS-like
Clole_4215	SSF46894	C-terminal effector domain of the bipartite response regulators
Clole_4220	SSF51161	Trimeric LpxA-like enzymes
Clole_4220	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Clole_4222	SSF55383	Copper amine oxidase, domain N
Clole_4223	SSF55486	Metalloproteases ("zincins"), catalytic domain
Clole_4225	SSF50022	ISP domain
Clole_4225	SSF51905	FAD/NAD(P)-binding domain
Clole_4226	SSF51735	NAD(P)-binding Rossmann-fold domains
Clole_4226	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
Clole_4227	SSF52151	FabD/lysophospholipase-like
Clole_4229	SSF52954	Class II aaRS ABD-related
Clole_4229	SSF55681	Class II aaRS and biotin synthetases
Clole_4229	SSF55826	YbaK/ProRS associated domain
Clole_4232	SSF46785	"Winged helix" DNA-binding domain
Clole_4232	SSF55781	GAF domain-like
Clole_4233	SSF51735	NAD(P)-binding Rossmann-fold domains
Clole_4235	SSF53098	Ribonuclease H-like
Clole_4236	SSF51412	Inosine monophosphate dehydrogenase (IMPDH)
Clole_4236	SSF54631	CBS-domain pair
Clole_4237	SSF55797	PR-1-like
Clole_4238	SSF55931	Glutamine synthetase/guanido kinase
Clole_4239	SSF50249	Nucleic acid-binding proteins
Clole_4239	SSF55681	Class II aaRS and biotin synthetases
Clole_4240	SSF55931	Glutamine synthetase/guanido kinase
Clole_4240	SSF89095	GatB/YqeY motif
Clole_4241	SSF75304	Amidase signature (AS) enzymes
Clole_4242	SSF141000	Glu-tRNAGln amidotransferase C subunit
Clole_4243	SSF46548	alpha-helical ferredoxin
Clole_4243	SSF51971	Nucleotide-binding domain
Clole_4244	SSF51395	FMN-linked oxidoreductases
Clole_4244	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
Clole_4244	SSF69336	Alpha subunit of glutamate synthase, C-terminal domain
Clole_4245	SSF54368	Glutamine synthetase, N-terminal domain
Clole_4245	SSF55931	Glutamine synthetase/guanido kinase
Clole_4246	SSF52172	CheY-like
Clole_4247	SSF54506	Diaminopimelate epimerase-like
Clole_4248	SSF53383	PLP-dependent transferases
Clole_4251	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_4252	SSF46785	"Winged helix" DNA-binding domain
Clole_4253	SSF46689	Homeodomain-like
Clole_4256	SSF56300	Metallo-dependent phosphatases
Clole_4262	SSF109709	KorB DNA-binding domain-like
Clole_4262	SSF110849	ParB/Sulfiredoxin
Clole_4263	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_4264	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
Clole_4264	SSF52374	Nucleotidylyl transferase
Clole_4264	SSF55190	Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain
Clole_4265	SSF110849	ParB/Sulfiredoxin
Clole_4266	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Clole_4267	SSF51905	FAD/NAD(P)-binding domain
Clole_4268	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Clole_4269	SSF82708	R3H domain
Clole_4272	SSF54211	Ribosomal protein S5 domain 2-like