Clst_0011	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
Clst_0016	PWY-6502	oxidized GTP and dGTP detoxification
Clst_0067	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
Clst_0067	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Clst_0067	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Clst_0069	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
Clst_0098	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
Clst_0098	PWY-622	starch biosynthesis
Clst_0105	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
Clst_0105	PWY-2161	folate polyglutamylation
Clst_0105	PWY-2201	folate transformations I
Clst_0105	PWY-3841	folate transformations II
Clst_0116	PWY-7560	methylerythritol phosphate pathway II
Clst_0148	PWY-7560	methylerythritol phosphate pathway II
Clst_0153	PWY-6807	xyloglucan degradation II (exoglucanase)
Clst_0174	PWY-5278	sulfite oxidation III
Clst_0174	PWY-5340	sulfate activation for sulfonation
Clst_0174	PWY-6683	sulfate reduction III (assimilatory)
Clst_0174	PWY-6932	selenate reduction
Clst_0231	PWY-6807	xyloglucan degradation II (exoglucanase)
Clst_0239	PWY-5340	sulfate activation for sulfonation
Clst_0259	PWY-7560	methylerythritol phosphate pathway II
Clst_0277	PWY-2723	trehalose degradation V
Clst_0277	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
Clst_0277	PWY-5661	GDP-glucose biosynthesis
Clst_0277	PWY-7238	sucrose biosynthesis II
Clst_0277	PWY-7385	1,3-propanediol biosynthesis (engineered)
Clst_0310	PWY-3801	sucrose degradation II (sucrose synthase)
Clst_0310	PWY-6527	stachyose degradation
Clst_0310	PWY-6981	chitin biosynthesis
Clst_0310	PWY-7238	sucrose biosynthesis II
Clst_0310	PWY-7343	UDP-glucose biosynthesis
Clst_0330	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Clst_0331	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Clst_0350	PWY-6902	chitin degradation II
Clst_0354	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Clst_0354	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Clst_0423	PWY-6527	stachyose degradation
Clst_0438	PWY-7242	D-fructuronate degradation
Clst_0469	PWY-6784	cellulose and hemicellulose degradation (cellulolosome)
Clst_0501	PWY-101	photosynthesis light reactions
Clst_0501	PWY-7230	ubiquinol-6 biosynthesis from 4-aminobenzoate (eukaryotic)
Clst_0502	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Clst_0502	PWY-6416	quinate degradation II
Clst_0502	PWY-6707	gallate biosynthesis
Clst_0526	PWY-7039	phosphatidate metabolism, as a signaling molecule
Clst_0540	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Clst_0588	PWY-6807	xyloglucan degradation II (exoglucanase)
Clst_0589	PWY-622	starch biosynthesis
Clst_0600	PWY-1042	glycolysis IV (plant cytosol)
Clst_0600	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
Clst_0600	PWY-5484	glycolysis II (from fructose 6-phosphate)
Clst_0600	PWY-5723	Rubisco shunt
Clst_0600	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Clst_0600	PWY-6886	1-butanol autotrophic biosynthesis
Clst_0600	PWY-6901	superpathway of glucose and xylose degradation
Clst_0600	PWY-7003	glycerol degradation to butanol
Clst_0600	PWY-7124	ethylene biosynthesis V (engineered)
Clst_0600	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
Clst_0601	PWY-6339	syringate degradation
Clst_0602	PWY-6339	syringate degradation
Clst_0604	PWY-1281	sulfoacetaldehyde degradation I
Clst_0604	PWY-5482	pyruvate fermentation to acetate II
Clst_0604	PWY-5485	pyruvate fermentation to acetate IV
Clst_0604	PWY-5497	purine nucleobases degradation II (anaerobic)
Clst_0604	PWY-6637	sulfolactate degradation II
Clst_0607	PWY-1281	sulfoacetaldehyde degradation I
Clst_0607	PWY-5482	pyruvate fermentation to acetate II
Clst_0607	PWY-5485	pyruvate fermentation to acetate IV
Clst_0607	PWY-5497	purine nucleobases degradation II (anaerobic)
Clst_0607	PWY-6637	sulfolactate degradation II
Clst_0617	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
Clst_0617	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
Clst_0618	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
Clst_0618	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
Clst_0618	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
Clst_0630	PWY-6784	cellulose and hemicellulose degradation (cellulolosome)
Clst_0640	PWY-2161	folate polyglutamylation
Clst_0642	PWY-1042	glycolysis IV (plant cytosol)
Clst_0642	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Clst_0642	PWY-5484	glycolysis II (from fructose 6-phosphate)
Clst_0642	PWY-6531	mannitol cycle
Clst_0642	PWY-7385	1,3-propanediol biosynthesis (engineered)
Clst_0662	PWY-5198	factor 420 biosynthesis
Clst_0662	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
Clst_0663	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
Clst_0675	PWY-6784	cellulose and hemicellulose degradation (cellulolosome)
Clst_0698	PWY-6614	tetrahydrofolate biosynthesis
Clst_0699	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
Clst_0699	PWY-6148	tetrahydromethanopterin biosynthesis
Clst_0699	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
Clst_0699	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
Clst_0700	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
Clst_0700	PWY-6148	tetrahydromethanopterin biosynthesis
Clst_0700	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
Clst_0700	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
Clst_0701	PWY-5663	tetrahydrobiopterin biosynthesis I
Clst_0701	PWY-5664	tetrahydrobiopterin biosynthesis II
Clst_0701	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
Clst_0701	PWY-6703	preQ<sub>0</sub> biosynthesis
Clst_0701	PWY-6983	tetrahydrobiopterin biosynthesis III
Clst_0701	PWY-7442	drosopterin and aurodrosopterin biosynthesis
Clst_0716	PWY-6784	cellulose and hemicellulose degradation (cellulolosome)
Clst_0731	PWY-5913	TCA cycle VI (obligate autotrophs)
Clst_0731	PWY-6549	L-glutamine biosynthesis III
Clst_0731	PWY-6728	methylaspartate cycle
Clst_0731	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Clst_0731	PWY-7124	ethylene biosynthesis V (engineered)
Clst_0731	PWY-7254	TCA cycle VII (acetate-producers)
Clst_0731	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
Clst_0736	PWY-1622	formaldehyde assimilation I (serine pathway)
Clst_0736	PWY-181	photorespiration
Clst_0736	PWY-2161	folate polyglutamylation
Clst_0736	PWY-2201	folate transformations I
Clst_0736	PWY-3661	glycine betaine degradation I
Clst_0736	PWY-3661-1	glycine betaine degradation II (mammalian)
Clst_0736	PWY-3841	folate transformations II
Clst_0736	PWY-5497	purine nucleobases degradation II (anaerobic)
Clst_0760	PWY-1341	phenylacetate degradation II (anaerobic)
Clst_0760	PWY-6318	L-phenylalanine degradation IV (mammalian, via side chain)
Clst_0764	PWY-5663	tetrahydrobiopterin biosynthesis I
Clst_0764	PWY-5664	tetrahydrobiopterin biosynthesis II
Clst_0764	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
Clst_0764	PWY-6703	preQ<sub>0</sub> biosynthesis
Clst_0764	PWY-6983	tetrahydrobiopterin biosynthesis III
Clst_0764	PWY-7442	drosopterin and aurodrosopterin biosynthesis
Clst_0774	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
Clst_0774	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
Clst_0774	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
Clst_0774	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
Clst_0782	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
Clst_0782	PWY-6507	4-deoxy-L-<i>threo</i>-hex-4-enopyranuronate degradation
Clst_0782	PWY-7242	D-fructuronate degradation
Clst_0782	PWY-7310	D-glucosaminate degradation
Clst_0789	PWY-2941	L-lysine biosynthesis II
Clst_0789	PWY-5097	L-lysine biosynthesis VI
Clst_0789	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Clst_0789	PWY-5686	UMP biosynthesis
Clst_0789	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Clst_0790	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Clst_0790	PWY-5686	UMP biosynthesis
Clst_0790	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Clst_0791	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Clst_0791	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
Clst_0791	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
Clst_0791	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
Clst_0810	PWY-2723	trehalose degradation V
Clst_0810	PWY-6317	galactose degradation I (Leloir pathway)
Clst_0810	PWY-6737	starch degradation V
Clst_0829	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
Clst_0829	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
Clst_0833	PWY-4261	glycerol degradation I
Clst_0843	PWY-2781	<i>cis</i>-zeatin biosynthesis
Clst_0846	PWY-6507	4-deoxy-L-<i>threo</i>-hex-4-enopyranuronate degradation
Clst_0847	PWY-6507	4-deoxy-L-<i>threo</i>-hex-4-enopyranuronate degradation
Clst_0875	PWY-4261	glycerol degradation I
Clst_0879	PWY-6823	molybdenum cofactor biosynthesis
Clst_0879	PWY-6891	thiazole biosynthesis II (Bacillus)
Clst_0879	PWY-6892	thiazole biosynthesis I (E. coli)
Clst_0879	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
Clst_0885	PWY-7180	2'-deoxy-&alpha;-D-ribose 1-phosphate degradation
Clst_0888	PWY-5651	L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
Clst_0888	PWY-6309	L-tryptophan degradation XI (mammalian, via kynurenine)
Clst_0890	PWY-5941	glycogen degradation II (eukaryotic)
Clst_0890	PWY-622	starch biosynthesis
Clst_0890	PWY-6731	starch degradation III
Clst_0890	PWY-6737	starch degradation V
Clst_0890	PWY-7238	sucrose biosynthesis II
Clst_0895	PWY-5971	palmitate biosynthesis II (bacteria and plants)
Clst_0895	PWY-5973	<i>cis</i>-vaccenate biosynthesis
Clst_0895	PWY-5989	stearate biosynthesis II (bacteria and plants)
Clst_0895	PWY-6113	superpathway of mycolate biosynthesis
Clst_0895	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
Clst_0895	PWY-6519	8-amino-7-oxononanoate biosynthesis I
Clst_0895	PWY-7096	triclosan resistance
Clst_0895	PWYG-321	mycolate biosynthesis
Clst_0918	PWY-2941	L-lysine biosynthesis II
Clst_0918	PWY-5097	L-lysine biosynthesis VI
Clst_0919	PWY-5097	L-lysine biosynthesis VI
Clst_0927	PWY-1042	glycolysis IV (plant cytosol)
Clst_0927	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Clst_0927	PWY-5484	glycolysis II (from fructose 6-phosphate)
Clst_0927	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Clst_0927	PWY-7385	1,3-propanediol biosynthesis (engineered)
Clst_0938	PWY-5941	glycogen degradation II (eukaryotic)
Clst_0938	PWY-622	starch biosynthesis
Clst_0938	PWY-6731	starch degradation III
Clst_0938	PWY-6737	starch degradation V
Clst_0938	PWY-7238	sucrose biosynthesis II
Clst_0942	PWY-6807	xyloglucan degradation II (exoglucanase)
Clst_0966	PWY-5199	factor 420 polyglutamylation
Clst_0968	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
Clst_0987	PWY-6167	flavin biosynthesis II (archaea)
Clst_1004	PWY-6854	ethylene biosynthesis III (microbes)
Clst_1011	PWY-6891	thiazole biosynthesis II (Bacillus)
Clst_1011	PWY-6892	thiazole biosynthesis I (E. coli)
Clst_1011	PWY-7560	methylerythritol phosphate pathway II
Clst_1013	PWY-4261	glycerol degradation I
Clst_1030	PWY-6871	3-methylbutanol biosynthesis
Clst_1044	PWY-5523	5,6-dimethylbenzimidazole biosynthesis
Clst_1044	PWY-6167	flavin biosynthesis II (archaea)
Clst_1044	PWY-6168	flavin biosynthesis III (fungi)
Clst_1050	PWY-4381	fatty acid biosynthesis initiation I
Clst_1050	PWY-5743	3-hydroxypropanoate cycle
Clst_1050	PWY-5744	glyoxylate assimilation
Clst_1050	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Clst_1050	PWY-6679	jadomycin biosynthesis
Clst_1050	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Clst_1053	PWY-3801	sucrose degradation II (sucrose synthase)
Clst_1053	PWY-5054	sorbitol biosynthesis I
Clst_1053	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
Clst_1053	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
Clst_1053	PWY-5659	GDP-mannose biosynthesis
Clst_1053	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Clst_1053	PWY-621	sucrose degradation III (sucrose invertase)
Clst_1053	PWY-622	starch biosynthesis
Clst_1053	PWY-6531	mannitol cycle
Clst_1053	PWY-6981	chitin biosynthesis
Clst_1053	PWY-7238	sucrose biosynthesis II
Clst_1053	PWY-7347	sucrose biosynthesis III
Clst_1053	PWY-7385	1,3-propanediol biosynthesis (engineered)
Clst_1064	PWY-6749	CMP-legionaminate biosynthesis I
Clst_1086	PWY-7456	mannan degradation
Clst_1097	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
Clst_1097	PWY-6596	adenosine nucleotides degradation I
Clst_1097	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
Clst_1104	PWY-5269	cardiolipin biosynthesis II
Clst_1104	PWY-5668	cardiolipin biosynthesis I
Clst_1107	PWY-4381	fatty acid biosynthesis initiation I
Clst_1108	PWY-4381	fatty acid biosynthesis initiation I
Clst_1108	PWY-6799	fatty acid biosynthesis (plant mitochondria)
Clst_1108	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Clst_1109	PWY-5367	petroselinate biosynthesis
Clst_1109	PWY-5971	palmitate biosynthesis II (bacteria and plants)
Clst_1109	PWY-5973	<i>cis</i>-vaccenate biosynthesis
Clst_1109	PWY-5989	stearate biosynthesis II (bacteria and plants)
Clst_1109	PWY-5994	palmitate biosynthesis I (animals and fungi)
Clst_1109	PWY-6113	superpathway of mycolate biosynthesis
Clst_1109	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
Clst_1109	PWY-6519	8-amino-7-oxononanoate biosynthesis I
Clst_1109	PWY-6951	Clst_1109|Clst_1109|REF_MGCB2:Clst_1109|GeneID:15043378
Clst_1109	PWY-7053	docosahexaenoate biosynthesis I (lower eukaryotes)
Clst_1109	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Clst_1109	PWYG-321	mycolate biosynthesis
Clst_1114	PWY-3961	phosphopantothenate biosynthesis II
Clst_1144	PWY-2941	L-lysine biosynthesis II
Clst_1144	PWY-2942	L-lysine biosynthesis III
Clst_1144	PWY-5097	L-lysine biosynthesis VI
Clst_1145	PWY-2941	L-lysine biosynthesis II
Clst_1145	PWY-2942	L-lysine biosynthesis III
Clst_1145	PWY-5097	L-lysine biosynthesis VI
Clst_1146	PWY-2941	L-lysine biosynthesis II
Clst_1146	PWY-2942	L-lysine biosynthesis III
Clst_1146	PWY-5097	L-lysine biosynthesis VI
Clst_1146	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Clst_1146	PWY-6559	spermidine biosynthesis II
Clst_1146	PWY-6562	norspermidine biosynthesis
Clst_1146	PWY-7153	grixazone biosynthesis
Clst_1146	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Clst_1161	PWY-3861	mannitol degradation II
Clst_1161	PWY-3881	mannitol biosynthesis
Clst_1161	PWY-5659	GDP-mannose biosynthesis
Clst_1161	PWY-7456	mannan degradation
Clst_1161	PWY-882	L-ascorbate biosynthesis I (L-galactose pathway)
Clst_1166	PWY-6339	syringate degradation
Clst_1174	PWY-5381	pyridine nucleotide cycling (plants)
Clst_1174	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
Clst_1189	PWY-5651	L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
Clst_1189	PWY-6309	L-tryptophan degradation XI (mammalian, via kynurenine)
Clst_1190	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
Clst_1192	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
Clst_1192	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Clst_1192	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
Clst_1192	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
Clst_1192	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
Clst_1192	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
Clst_1230	PWY-5057	L-valine degradation II
Clst_1230	PWY-5076	L-leucine degradation III
Clst_1230	PWY-5078	L-isoleucine degradation II
Clst_1230	PWY-5101	L-isoleucine biosynthesis II
Clst_1230	PWY-5103	L-isoleucine biosynthesis III
Clst_1230	PWY-5104	L-isoleucine biosynthesis IV
Clst_1230	PWY-5108	L-isoleucine biosynthesis V
Clst_1232	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Clst_1242	PWY-1281	sulfoacetaldehyde degradation I
Clst_1242	PWY-5482	pyruvate fermentation to acetate II
Clst_1242	PWY-5485	pyruvate fermentation to acetate IV
Clst_1242	PWY-5497	purine nucleobases degradation II (anaerobic)
Clst_1242	PWY-6637	sulfolactate degradation II
Clst_1243	PWY-5482	pyruvate fermentation to acetate II
Clst_1243	PWY-5485	pyruvate fermentation to acetate IV
Clst_1243	PWY-5497	purine nucleobases degradation II (anaerobic)
Clst_1244	PWY-2941	L-lysine biosynthesis II
Clst_1244	PWY-2942	L-lysine biosynthesis III
Clst_1244	PWY-5097	L-lysine biosynthesis VI
Clst_1244	PWY-6559	spermidine biosynthesis II
Clst_1244	PWY-6562	norspermidine biosynthesis
Clst_1244	PWY-7153	grixazone biosynthesis
Clst_1250	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
Clst_1250	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
Clst_1250	PWY-6164	3-dehydroquinate biosynthesis I
Clst_1251	PWY-6164	3-dehydroquinate biosynthesis I
Clst_1252	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Clst_1253	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Clst_1254	PWY-3461	L-tyrosine biosynthesis II
Clst_1254	PWY-3462	L-phenylalanine biosynthesis II
Clst_1254	PWY-6120	L-tyrosine biosynthesis III
Clst_1254	PWY-6627	salinosporamide A biosynthesis
Clst_1254	PWY-7432	L-phenylalanine biosynthesis III (cytosolic, plants)
Clst_1255	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Clst_1256	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Clst_1258	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
Clst_1258	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
Clst_1260	PWY-6123	inosine-5'-phosphate biosynthesis I
Clst_1260	PWY-6124	inosine-5'-phosphate biosynthesis II
Clst_1260	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Clst_1260	PWY-7234	inosine-5'-phosphate biosynthesis III
Clst_1265	PWY-6700	queuosine biosynthesis
Clst_1268	PWY-6700	queuosine biosynthesis
Clst_1271	PWY-6829	tRNA methylation (yeast)
Clst_1271	PWY-7285	methylwyosine biosynthesis
Clst_1271	PWY-7286	7-(3-amino-3-carboxypropyl)-wyosine biosynthesis
Clst_1294	PWY-6823	molybdenum cofactor biosynthesis
Clst_1294	PWY-6891	thiazole biosynthesis II (Bacillus)
Clst_1294	PWY-6892	thiazole biosynthesis I (E. coli)
Clst_1294	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
Clst_1296	PWY-7206	pyrimidine deoxyribonucleotides dephosphorylation
Clst_1332	PWY-5101	L-isoleucine biosynthesis II
Clst_1332	PWY-5103	L-isoleucine biosynthesis III
Clst_1332	PWY-5104	L-isoleucine biosynthesis IV
Clst_1332	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Clst_1333	PWY-5101	L-isoleucine biosynthesis II
Clst_1333	PWY-5103	L-isoleucine biosynthesis III
Clst_1333	PWY-5104	L-isoleucine biosynthesis IV
Clst_1333	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
Clst_1333	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
Clst_1333	PWY-6389	(<i>S</i>)-acetoin biosynthesis
Clst_1333	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Clst_1334	PWY-5101	L-isoleucine biosynthesis II
Clst_1334	PWY-5103	L-isoleucine biosynthesis III
Clst_1334	PWY-5104	L-isoleucine biosynthesis IV
Clst_1334	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Clst_1335	PWY-5101	L-isoleucine biosynthesis II
Clst_1335	PWY-5103	L-isoleucine biosynthesis III
Clst_1335	PWY-5104	L-isoleucine biosynthesis IV
Clst_1335	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
Clst_1335	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
Clst_1335	PWY-6389	(<i>S</i>)-acetoin biosynthesis
Clst_1335	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Clst_1336	PWY-7396	butanol and isobutanol biosynthesis (engineered)
Clst_1342	PWY-6807	xyloglucan degradation II (exoglucanase)
Clst_1362	PWY-5941	glycogen degradation II (eukaryotic)
Clst_1362	PWY-6724	starch degradation II
Clst_1362	PWY-6737	starch degradation V
Clst_1362	PWY-7238	sucrose biosynthesis II
Clst_1365	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Clst_1365	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Clst_1378	PWY-7560	methylerythritol phosphate pathway II
Clst_1380	PWY-7560	methylerythritol phosphate pathway II
Clst_1396	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
Clst_1406	PWY-5344	L-homocysteine biosynthesis
Clst_1406	PWY-7174	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation II
Clst_1411	PWY-6749	CMP-legionaminate biosynthesis I
Clst_1414	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
Clst_1414	PWY-2201	folate transformations I
Clst_1414	PWY-3841	folate transformations II
Clst_1414	PWY-5030	L-histidine degradation III
Clst_1414	PWY-5497	purine nucleobases degradation II (anaerobic)
Clst_1414	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
Clst_1418	PWY-7456	mannan degradation
Clst_1423	PWY-3341	L-proline biosynthesis III
Clst_1423	PWY-4981	L-proline biosynthesis II (from arginine)
Clst_1423	PWY-6344	L-ornithine degradation II (Stickland reaction)
Clst_1427	PWY-4983	L-citrulline-nitric oxide cycle
Clst_1427	PWY-4984	urea cycle
Clst_1427	PWY-5	canavanine biosynthesis
Clst_1427	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Clst_1427	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Clst_1428	PWY-4983	L-citrulline-nitric oxide cycle
Clst_1428	PWY-4984	urea cycle
Clst_1428	PWY-5	canavanine biosynthesis
Clst_1428	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Clst_1428	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Clst_1431	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
Clst_1431	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
Clst_1431	PWY-6268	adenosylcobalamin salvage from cobalamin
Clst_1431	PWY-6269	adenosylcobalamin salvage from cobinamide II
Clst_1435	PWY-5269	cardiolipin biosynthesis II
Clst_1435	PWY-5668	cardiolipin biosynthesis I
Clst_1437	PWY-1042	glycolysis IV (plant cytosol)
Clst_1437	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Clst_1437	PWY-5484	glycolysis II (from fructose 6-phosphate)
Clst_1437	PWY-7385	1,3-propanediol biosynthesis (engineered)
Clst_1450	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Clst_1450	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Clst_1457	PWY-7560	methylerythritol phosphate pathway II
Clst_1458	PWY-5667	CDP-diacylglycerol biosynthesis I
Clst_1458	PWY-5981	CDP-diacylglycerol biosynthesis III
Clst_1458	PWY-7411	superpathway of phosphatidate biosynthesis (yeast)
Clst_1458	PWY-7417	phospholipid remodeling (phosphatidate, yeast)
Clst_1459	PWY-7205	CMP phosphorylation
Clst_1477	PWY-5381	pyridine nucleotide cycling (plants)
Clst_1477	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
Clst_1496	PWY-6871	3-methylbutanol biosynthesis
Clst_1512	PWY-5738	GDP-6-deoxy-D-talose biosynthesis
Clst_1512	PWY-5739	GDP-D-perosamine biosynthesis
Clst_1512	PWY-5740	GDP-L-colitose biosynthesis
Clst_1512	PWY-66	GDP-L-fucose biosynthesis I (from GDP-D-mannose)
Clst_1513	PWY-66	GDP-L-fucose biosynthesis I (from GDP-D-mannose)
Clst_1530	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
Clst_1534	PWY-5316	nicotine biosynthesis
Clst_1534	PWY-7342	superpathway of nicotine biosynthesis
Clst_1546	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
Clst_1546	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
Clst_1548	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Clst_1548	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Clst_1558	PWY-6961	L-ascorbate degradation II (bacterial, aerobic)
Clst_1559	PWY-4261	glycerol degradation I
Clst_1586	PWY-6527	stachyose degradation
Clst_1610	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Clst_1610	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Clst_1627	PWY-6527	stachyose degradation
Clst_1663	PWY-4361	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation
Clst_1663	PWY-7174	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation II
Clst_1710	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
Clst_1710	PWY-7177	UTP and CTP dephosphorylation II
Clst_1710	PWY-7185	UTP and CTP dephosphorylation I
Clst_1712	PWY-381	nitrate reduction II (assimilatory)
Clst_1712	PWY-5675	nitrate reduction V (assimilatory)
Clst_1712	PWY-6549	L-glutamine biosynthesis III
Clst_1712	PWY-6963	ammonia assimilation cycle I
Clst_1712	PWY-6964	ammonia assimilation cycle II
Clst_1717	PWY-381	nitrate reduction II (assimilatory)
Clst_1717	PWY-5675	nitrate reduction V (assimilatory)
Clst_1717	PWY-6549	L-glutamine biosynthesis III
Clst_1717	PWY-6963	ammonia assimilation cycle I
Clst_1717	PWY-6964	ammonia assimilation cycle II
Clst_1718	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Clst_1727	PWY-6562	norspermidine biosynthesis
Clst_1729	PWY-40	putrescine biosynthesis I
Clst_1729	PWY-6305	putrescine biosynthesis IV
Clst_1746	PWY-6749	CMP-legionaminate biosynthesis I
Clst_1761	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
Clst_1761	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
Clst_1767	PWY-6910	hydroxymethylpyrimidine salvage
Clst_1767	PWY-7356	thiamin salvage IV (yeast)
Clst_1767	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
Clst_1768	PWY-6910	hydroxymethylpyrimidine salvage
Clst_1768	PWY-7356	thiamin salvage IV (yeast)
Clst_1768	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
Clst_1770	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
Clst_1770	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
Clst_1770	PWY-6897	thiamin salvage II
Clst_1770	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
Clst_1770	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
Clst_1770	PWY-7353	4-methyl-5(&beta;-hydroxyethyl)thiazole salvage (yeast)
Clst_1770	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
Clst_1771	PWY-6897	thiamin salvage II
Clst_1771	PWY-7353	4-methyl-5(&beta;-hydroxyethyl)thiazole salvage (yeast)
Clst_1771	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
Clst_1795	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
Clst_1795	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
Clst_1812	PWY-3162	L-tryptophan degradation V (side chain pathway)
Clst_1812	PWY-5057	L-valine degradation II
Clst_1812	PWY-5076	L-leucine degradation III
Clst_1812	PWY-5078	L-isoleucine degradation II
Clst_1812	PWY-5079	L-phenylalanine degradation III
Clst_1812	PWY-5082	L-methionine degradation III
Clst_1812	PWY-5162	2-oxopentenoate degradation
Clst_1812	PWY-5436	L-threonine degradation IV
Clst_1812	PWY-5480	pyruvate fermentation to ethanol I
Clst_1812	PWY-5486	pyruvate fermentation to ethanol II
Clst_1812	PWY-5751	phenylethanol biosynthesis
Clst_1812	PWY-6028	acetoin degradation
Clst_1812	PWY-6313	serotonin degradation
Clst_1812	PWY-6333	acetaldehyde biosynthesis I
Clst_1812	PWY-6342	noradrenaline and adrenaline degradation
Clst_1812	PWY-6587	pyruvate fermentation to ethanol III
Clst_1812	PWY-6802	salidroside biosynthesis
Clst_1812	PWY-6871	3-methylbutanol biosynthesis
Clst_1812	PWY-7013	L-1,2-propanediol degradation
Clst_1812	PWY-7085	triethylamine degradation
Clst_1812	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Clst_1812	PWY-7118	chitin degradation to ethanol
Clst_1812	PWY-7180	2'-deoxy-&alpha;-D-ribose 1-phosphate degradation
Clst_1812	PWY-7396	butanol and isobutanol biosynthesis (engineered)
Clst_1812	PWY-7557	dehydrodiconiferyl alcohol degradation
Clst_1823	PWY-6788	cellulose degradation II (fungi)
Clst_1837	PWY-381	nitrate reduction II (assimilatory)
Clst_1837	PWY-5675	nitrate reduction V (assimilatory)
Clst_1837	PWY-6549	L-glutamine biosynthesis III
Clst_1837	PWY-6963	ammonia assimilation cycle I
Clst_1837	PWY-6964	ammonia assimilation cycle II
Clst_1839	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
Clst_1852	PWY-6784	cellulose and hemicellulose degradation (cellulolosome)
Clst_1878	PWY-2942	L-lysine biosynthesis III
Clst_1883	PWY-5372	carbon tetrachloride degradation II
Clst_1883	PWY-6780	hydrogen production VI
Clst_1886	PWY-5491	diethylphosphate degradation
Clst_1889	PWY-6936	seleno-amino acid biosynthesis
Clst_1892	PWY-6936	seleno-amino acid biosynthesis
Clst_1899	PWY-5344	L-homocysteine biosynthesis
Clst_1899	PWY-7174	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation II
Clst_1905	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
Clst_1905	PWY-6855	chitin degradation I (archaea)
Clst_1905	PWY-6906	chitin derivatives degradation
Clst_1911	PWY-6906	chitin derivatives degradation
Clst_1911	PWY-7077	<i>N</i>-acetyl-D-galactosamine degradation
Clst_1911	PWY-7395	D-galactosamine and <i>N</i>-acetyl-D-galactosamine degradation
Clst_1918	PWY-2941	L-lysine biosynthesis II
Clst_1918	PWY-2942	L-lysine biosynthesis III
Clst_1918	PWY-5097	L-lysine biosynthesis VI
Clst_1931	PWY-5958	acridone alkaloid biosynthesis
Clst_1931	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
Clst_1931	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
Clst_1932	PWY-5958	acridone alkaloid biosynthesis
Clst_1932	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
Clst_1932	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
Clst_1933	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
Clst_1933	PWY-6549	L-glutamine biosynthesis III
Clst_1933	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
Clst_1933	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
Clst_1936	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
Clst_1957	PWY-6556	pyrimidine ribonucleosides salvage II
Clst_1957	PWY-7181	pyrimidine deoxyribonucleosides degradation
Clst_1957	PWY-7193	pyrimidine ribonucleosides salvage I
Clst_1957	PWY-7199	pyrimidine deoxyribonucleosides salvage
Clst_1961	PWY-622	starch biosynthesis
Clst_1962	PWY-622	starch biosynthesis
Clst_1969	PWY-6898	thiamin salvage III
Clst_1969	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
Clst_1969	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
Clst_1970	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Clst_1970	PWY-5723	Rubisco shunt
Clst_1976	PWY-7533	gliotoxin biosynthesis
Clst_1985	PWY-1042	glycolysis IV (plant cytosol)
Clst_1985	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
Clst_1985	PWY-5484	glycolysis II (from fructose 6-phosphate)
Clst_1985	PWY-5723	Rubisco shunt
Clst_1985	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Clst_1985	PWY-6886	1-butanol autotrophic biosynthesis
Clst_1985	PWY-6901	superpathway of glucose and xylose degradation
Clst_1985	PWY-7003	glycerol degradation to butanol
Clst_1985	PWY-7124	ethylene biosynthesis V (engineered)
Clst_1985	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
Clst_1986	PWY-1042	glycolysis IV (plant cytosol)
Clst_1986	PWY-5484	glycolysis II (from fructose 6-phosphate)
Clst_1986	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Clst_1986	PWY-7003	glycerol degradation to butanol
Clst_1987	PWY-1042	glycolysis IV (plant cytosol)
Clst_1987	PWY-5484	glycolysis II (from fructose 6-phosphate)
Clst_1987	PWY-6886	1-butanol autotrophic biosynthesis
Clst_1987	PWY-6901	superpathway of glucose and xylose degradation
Clst_1987	PWY-7003	glycerol degradation to butanol
Clst_1988	PWY-1042	glycolysis IV (plant cytosol)
Clst_1988	PWY-5484	glycolysis II (from fructose 6-phosphate)
Clst_1988	PWY-6901	superpathway of glucose and xylose degradation
Clst_1988	PWY-7003	glycerol degradation to butanol
Clst_2005	PWY-5686	UMP biosynthesis
Clst_2006	PWY-5686	UMP biosynthesis
Clst_2007	PWY-5686	UMP biosynthesis
Clst_2010	PWY-6902	chitin degradation II
Clst_2019	PWY-3841	folate transformations II
Clst_2019	PWY-6614	tetrahydrofolate biosynthesis
Clst_2020	PWY-3841	folate transformations II
Clst_2020	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Clst_2020	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
Clst_2020	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
Clst_2020	PWY-7199	pyrimidine deoxyribonucleosides salvage
Clst_2020	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
Clst_2021	PWY-7247	&beta;-D-glucuronide and D-glucuronate degradation
Clst_2021	PWY-7248	pectin degradation III
Clst_2023	PWY-5481	pyruvate fermentation to lactate
Clst_2023	PWY-6901	superpathway of glucose and xylose degradation
Clst_2026	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Clst_2026	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
Clst_2026	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
Clst_2027	PWY-6123	inosine-5'-phosphate biosynthesis I
Clst_2027	PWY-6124	inosine-5'-phosphate biosynthesis II
Clst_2027	PWY-7234	inosine-5'-phosphate biosynthesis III
Clst_2028	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Clst_2028	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
Clst_2029	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Clst_2029	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
Clst_2029	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
Clst_2030	PWY-6123	inosine-5'-phosphate biosynthesis I
Clst_2030	PWY-7234	inosine-5'-phosphate biosynthesis III
Clst_2032	PWY-1042	glycolysis IV (plant cytosol)
Clst_2032	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Clst_2032	PWY-5484	glycolysis II (from fructose 6-phosphate)
Clst_2032	PWY-7385	1,3-propanediol biosynthesis (engineered)
Clst_2054	PWY-1042	glycolysis IV (plant cytosol)
Clst_2054	PWY-1622	formaldehyde assimilation I (serine pathway)
Clst_2054	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
Clst_2054	PWY-5484	glycolysis II (from fructose 6-phosphate)
Clst_2054	PWY-5723	Rubisco shunt
Clst_2054	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Clst_2054	PWY-6886	1-butanol autotrophic biosynthesis
Clst_2054	PWY-6901	superpathway of glucose and xylose degradation
Clst_2054	PWY-7003	glycerol degradation to butanol
Clst_2054	PWY-7124	ethylene biosynthesis V (engineered)
Clst_2054	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
Clst_2067	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
Clst_2067	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
Clst_2072	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Clst_2081	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Clst_2081	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Clst_2084	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
Clst_2084	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
Clst_2084	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
Clst_2085	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Clst_2085	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Clst_2103	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
Clst_2106	PWY-4202	arsenate detoxification I (glutaredoxin)
Clst_2106	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
Clst_2106	PWY-6608	guanosine nucleotides degradation III
Clst_2106	PWY-6609	adenine and adenosine salvage III
Clst_2106	PWY-6611	adenine and adenosine salvage V
Clst_2106	PWY-6620	guanine and guanosine salvage
Clst_2106	PWY-6627	salinosporamide A biosynthesis
Clst_2106	PWY-6644	fluoroacetate and fluorothreonine biosynthesis
Clst_2106	PWY-7179	purine deoxyribonucleosides degradation I
Clst_2106	PWY-7179-1	purine deoxyribonucleosides degradation
Clst_2107	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Clst_2112	PWY-622	starch biosynthesis
Clst_2115	PWY-6807	xyloglucan degradation II (exoglucanase)
Clst_2116	PWY-6807	xyloglucan degradation II (exoglucanase)
Clst_2149	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
Clst_2149	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
Clst_2149	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
Clst_2151	PWY-6891	thiazole biosynthesis II (Bacillus)
Clst_2151	PWY-6892	thiazole biosynthesis I (E. coli)
Clst_2151	PWY-7560	methylerythritol phosphate pathway II
Clst_2163	PWY-5340	sulfate activation for sulfonation
Clst_2174	PWY-4981	L-proline biosynthesis II (from arginine)
Clst_2174	PWY-4984	urea cycle
Clst_2174	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Clst_2177	PWY-6807	xyloglucan degradation II (exoglucanase)
Clst_2184	PWY-6891	thiazole biosynthesis II (Bacillus)
Clst_2184	PWY-6892	thiazole biosynthesis I (E. coli)
Clst_2184	PWY-7560	methylerythritol phosphate pathway II
Clst_2185	PWY-6891	thiazole biosynthesis II (Bacillus)
Clst_2185	PWY-6892	thiazole biosynthesis I (E. coli)
Clst_2185	PWY-7560	methylerythritol phosphate pathway II
Clst_2188	PWY-3821	galactose degradation III
Clst_2188	PWY-6317	galactose degradation I (Leloir pathway)
Clst_2188	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
Clst_2188	PWY-6527	stachyose degradation
Clst_2188	PWY-7328	superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
Clst_2188	PWY-7344	UDP-D-galactose biosynthesis
Clst_2189	PWY-3821	galactose degradation III
Clst_2189	PWY-6317	galactose degradation I (Leloir pathway)
Clst_2189	PWY-6527	stachyose degradation
Clst_2190	PWY-6317	galactose degradation I (Leloir pathway)
Clst_2190	PWY-6527	stachyose degradation
Clst_2192	PWY-381	nitrate reduction II (assimilatory)
Clst_2192	PWY-5675	nitrate reduction V (assimilatory)
Clst_2192	PWY-6549	L-glutamine biosynthesis III
Clst_2192	PWY-6963	ammonia assimilation cycle I
Clst_2192	PWY-6964	ammonia assimilation cycle II
Clst_2204	PWY-7560	methylerythritol phosphate pathway II
Clst_2222	PWY-7303	3-dimethylallyl-4-hydroxybenzoate biosynthesis
Clst_2224	PWY-6834	spermidine biosynthesis III
Clst_2229	PWY-1042	glycolysis IV (plant cytosol)
Clst_2229	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
Clst_2229	PWY-5484	glycolysis II (from fructose 6-phosphate)
Clst_2229	PWY-5723	Rubisco shunt
Clst_2229	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Clst_2229	PWY-6886	1-butanol autotrophic biosynthesis
Clst_2229	PWY-6901	superpathway of glucose and xylose degradation
Clst_2229	PWY-7003	glycerol degradation to butanol
Clst_2229	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
Clst_2229	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
Clst_2231	PWY-6890	4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis
Clst_2237	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
Clst_2237	PWY-5912	2'-deoxymugineic acid phytosiderophore biosynthesis
Clst_2261	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Clst_2261	PWY-5686	UMP biosynthesis
Clst_2261	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Clst_2262	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Clst_2262	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
Clst_2262	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
Clst_2262	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
Clst_2268	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
Clst_2268	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
Clst_2269	PWY-7181	pyrimidine deoxyribonucleosides degradation
Clst_2270	PWY-7180	2'-deoxy-&alpha;-D-ribose 1-phosphate degradation
Clst_2272	PWY-6823	molybdenum cofactor biosynthesis
Clst_2272	PWY-6891	thiazole biosynthesis II (Bacillus)
Clst_2272	PWY-6892	thiazole biosynthesis I (E. coli)
Clst_2272	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
Clst_2276	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Clst_2279	PWY-5971	palmitate biosynthesis II (bacteria and plants)
Clst_2279	PWY-5973	<i>cis</i>-vaccenate biosynthesis
Clst_2279	PWY-5989	stearate biosynthesis II (bacteria and plants)
Clst_2279	PWY-5994	palmitate biosynthesis I (animals and fungi)
Clst_2279	PWY-6113	superpathway of mycolate biosynthesis
Clst_2279	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
Clst_2279	PWY-6519	8-amino-7-oxononanoate biosynthesis I
Clst_2279	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Clst_2279	PWYG-321	mycolate biosynthesis
Clst_2347	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Clst_2348	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Clst_2364	PWY-6012	acyl carrier protein metabolism I
Clst_2364	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
Clst_2369	PWY-2201	folate transformations I
Clst_2369	PWY-3841	folate transformations II
Clst_2370	PWY-2201	folate transformations I
Clst_2370	PWY-3841	folate transformations II
Clst_2374	PWY-6123	inosine-5'-phosphate biosynthesis I
Clst_2374	PWY-6124	inosine-5'-phosphate biosynthesis II
Clst_2374	PWY-7234	inosine-5'-phosphate biosynthesis III
Clst_2395	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
Clst_2397	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Clst_2397	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Clst_2406	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
Clst_2407	PWY-6938	NADH repair
Clst_2423	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Clst_2423	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Clst_2424	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Clst_2424	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Clst_2435	PWY-5381	pyridine nucleotide cycling (plants)
Clst_2449	PWY-7335	UDP-<i>N</i>-acetyl-&alpha;-D-mannosaminouronate biosynthesis
Clst_2450	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
Clst_2450	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
Clst_2450	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
Clst_2451	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
Clst_2452	PWY-7183	pyrimidine nucleobases salvage I
Clst_2481	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
Clst_2481	PWY-5912	2'-deoxymugineic acid phytosiderophore biosynthesis
Clst_2489	PWY-5303	thiosulfate oxidation II (via tetrathionate)
Clst_2511	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Clst_2537	PWY-1081	homogalacturonan degradation
Clst_2537	PWY-7246	pectin degradation II
Clst_2537	PWY-7248	pectin degradation III
Clst_2560	PWY-3961	phosphopantothenate biosynthesis II
Clst_2562	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
Clst_2562	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
Clst_2580	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Clst_2580	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Clst_2581	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Clst_2581	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Clst_2586	PWY-2201	folate transformations I
Clst_2586	PWY-3841	folate transformations II
Clst_2588	PWY-6599	guanine and guanosine salvage II
Clst_2588	PWY-6609	adenine and adenosine salvage III
Clst_2588	PWY-6610	adenine and adenosine salvage IV
Clst_2588	PWY-6620	guanine and guanosine salvage
Clst_2604	PWY-5316	nicotine biosynthesis
Clst_2604	PWY-5381	pyridine nucleotide cycling (plants)
Clst_2604	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
Clst_2604	PWY-7342	superpathway of nicotine biosynthesis
Clst_2605	PWY-5316	nicotine biosynthesis
Clst_2605	PWY-7342	superpathway of nicotine biosynthesis
Clst_2612	PWY-4261	glycerol degradation I
Clst_2618	PWY-6823	molybdenum cofactor biosynthesis
Clst_2624	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
Clst_2624	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Clst_2624	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
Clst_2624	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
Clst_2624	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Clst_2624	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Clst_2624	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
Clst_2624	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
Clst_2631	PWY-6906	chitin derivatives degradation
Clst_2631	PWY-7077	<i>N</i>-acetyl-D-galactosamine degradation
Clst_2631	PWY-7395	D-galactosamine and <i>N</i>-acetyl-D-galactosamine degradation
Clst_2639	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
Clst_2639	PWY-6855	chitin degradation I (archaea)
Clst_2639	PWY-6906	chitin derivatives degradation
Clst_2644	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Clst_2644	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
