jk0031	PWY-5958	acridone alkaloid biosynthesis
jk0031	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
jk0031	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
jk0036	PWY-5958	acridone alkaloid biosynthesis
jk0036	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
jk0036	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
jk0070	PWY-723	alkylnitronates degradation
jk0112	PWY-6854	ethylene biosynthesis III (microbes)
jk0113	PWY-5481	pyruvate fermentation to lactate
jk0113	PWY-6901	superpathway of glucose and xylose degradation
jk0118	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
jk0119	PWY-7432	L-phenylalanine biosynthesis III (cytosolic, plants)
jk0123	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
jk0127	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
jk0127	PWY-7328	superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
jk0139	PWY-4381	fatty acid biosynthesis initiation I
jk0139	PWY-5743	3-hydroxypropanoate cycle
jk0139	PWY-5744	glyoxylate assimilation
jk0139	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
jk0139	PWY-6679	jadomycin biosynthesis
jk0139	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
jk0151	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
jk0157	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
jk0159	PWY-1361	benzoyl-CoA degradation I (aerobic)
jk0159	PWY-5109	2-methylbutanoate biosynthesis
jk0159	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
jk0159	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
jk0159	PWY-5177	glutaryl-CoA degradation
jk0159	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
jk0159	PWY-6435	4-hydroxybenzoate biosynthesis V
jk0159	PWY-6583	pyruvate fermentation to butanol I
jk0159	PWY-6863	pyruvate fermentation to hexanol
jk0159	PWY-6883	pyruvate fermentation to butanol II
jk0159	PWY-6944	androstenedione degradation
jk0159	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
jk0159	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
jk0159	PWY-7007	methyl ketone biosynthesis
jk0159	PWY-7046	4-coumarate degradation (anaerobic)
jk0159	PWY-7094	fatty acid salvage
jk0159	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
jk0159	PWY-735	jasmonic acid biosynthesis
jk0159	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
jk0166	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
jk0173	PWY-7346	UDP-&alpha;-D-glucuronate biosynthesis (from UDP-glucose)
jk0174	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
jk0213	PWY-5686	UMP biosynthesis
jk0216	PWY-1042	glycolysis IV (plant cytosol)
jk0216	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
jk0216	PWY-5484	glycolysis II (from fructose 6-phosphate)
jk0216	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
jk0216	PWY-7385	1,3-propanediol biosynthesis (engineered)
jk0222	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
jk0225	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
jk0225	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
jk0225	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
jk0225	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
jk0225	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
jk0225	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
jk0225	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
jk0225	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
jk0227	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
jk0227	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
jk0234	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
jk0234	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
jk0234	PWY-6936	seleno-amino acid biosynthesis
jk0234	PWY-702	L-methionine biosynthesis II
jk0243	PWY-6683	sulfate reduction III (assimilatory)
jk0246	PWY-5278	sulfite oxidation III
jk0246	PWY-5340	sulfate activation for sulfonation
jk0246	PWY-6683	sulfate reduction III (assimilatory)
jk0246	PWY-6932	selenate reduction
jk0247	PWY-5278	sulfite oxidation III
jk0247	PWY-5340	sulfate activation for sulfonation
jk0247	PWY-6683	sulfate reduction III (assimilatory)
jk0247	PWY-6932	selenate reduction
jk0248	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
jk0250	PWY-1281	sulfoacetaldehyde degradation I
jk0250	PWY-5482	pyruvate fermentation to acetate II
jk0250	PWY-5485	pyruvate fermentation to acetate IV
jk0250	PWY-5497	purine nucleobases degradation II (anaerobic)
jk0250	PWY-6637	sulfolactate degradation II
jk0251	PWY-5482	pyruvate fermentation to acetate II
jk0251	PWY-5485	pyruvate fermentation to acetate IV
jk0251	PWY-5497	purine nucleobases degradation II (anaerobic)
jk0264	PWY-6840	homoglutathione biosynthesis
jk0264	PWY-7255	ergothioneine biosynthesis I (bacteria)
jk0275	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
jk0275	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
jk0277	PWY-6599	guanine and guanosine salvage II
jk0277	PWY-6609	adenine and adenosine salvage III
jk0277	PWY-6610	adenine and adenosine salvage IV
jk0277	PWY-6620	guanine and guanosine salvage
jk0279	PWY-5663	tetrahydrobiopterin biosynthesis I
jk0279	PWY-5664	tetrahydrobiopterin biosynthesis II
jk0279	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
jk0279	PWY-6703	preQ<sub>0</sub> biosynthesis
jk0279	PWY-6983	tetrahydrobiopterin biosynthesis III
jk0279	PWY-7442	drosopterin and aurodrosopterin biosynthesis
jk0280	PWY-6614	tetrahydrofolate biosynthesis
jk0281	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
jk0281	PWY-6148	tetrahydromethanopterin biosynthesis
jk0281	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
jk0281	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
jk0282	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
jk0282	PWY-6148	tetrahydromethanopterin biosynthesis
jk0282	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
jk0282	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
jk0290	PWY-6317	galactose degradation I (Leloir pathway)
jk0290	PWY-6527	stachyose degradation
jk0291	PWY-3821	galactose degradation III
jk0291	PWY-6317	galactose degradation I (Leloir pathway)
jk0291	PWY-6527	stachyose degradation
jk0292	PWY-5155	&beta;-alanine biosynthesis III
jk0297	PWY-6910	hydroxymethylpyrimidine salvage
jk0297	PWY-7356	thiamin salvage IV (yeast)
jk0297	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
jk0300	PWY-6857	retinol biosynthesis
jk0303	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
jk0303	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
jk0303	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
jk0303	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
jk0308	PWY-7560	methylerythritol phosphate pathway II
jk0309	PWY-7560	methylerythritol phosphate pathway II
jk0320	PWY-5874	heme degradation
jk0320	PWY-5915	phycoerythrobilin biosynthesis I
jk0320	PWY-5917	phycocyanobilin biosynthesis
jk0320	PWY-7170	phytochromobilin biosynthesis
jk0346	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
jk0346	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
jk0346	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
jk0349	PWY-6123	inosine-5'-phosphate biosynthesis I
jk0349	PWY-6124	inosine-5'-phosphate biosynthesis II
jk0349	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
jk0349	PWY-7234	inosine-5'-phosphate biosynthesis III
jk0350	PWY-6123	inosine-5'-phosphate biosynthesis I
jk0350	PWY-6124	inosine-5'-phosphate biosynthesis II
jk0350	PWY-7234	inosine-5'-phosphate biosynthesis III
jk0353	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
jk0353	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
jk0353	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
jk0354	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
jk0354	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
jk0354	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
jk0355	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
jk0355	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
jk0355	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
jk0358	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
jk0358	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
jk0358	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
jk0358	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
jk0359	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
jk0359	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
jk0359	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
jk0365	PWY-5686	UMP biosynthesis
jk0393	PWY-6936	seleno-amino acid biosynthesis
jk0393	PWY-7274	D-cycloserine biosynthesis
jk0394	PWY-6936	seleno-amino acid biosynthesis
jk0398	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
jk0398	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
jk0440	PWY-3841	folate transformations II
jk0440	PWY-6614	tetrahydrofolate biosynthesis
jk0441	PWY-3841	folate transformations II
jk0441	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
jk0441	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
jk0441	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
jk0441	PWY-7199	pyrimidine deoxyribonucleosides salvage
jk0441	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
jk0449	PWY-3801	sucrose degradation II (sucrose synthase)
jk0449	PWY-5054	sorbitol biosynthesis I
jk0449	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
jk0449	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
jk0449	PWY-5659	GDP-mannose biosynthesis
jk0449	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
jk0449	PWY-621	sucrose degradation III (sucrose invertase)
jk0449	PWY-622	starch biosynthesis
jk0449	PWY-6531	mannitol cycle
jk0449	PWY-6981	chitin biosynthesis
jk0449	PWY-7238	sucrose biosynthesis II
jk0449	PWY-7347	sucrose biosynthesis III
jk0449	PWY-7385	1,3-propanediol biosynthesis (engineered)
jk0454	PWY-5737	(5<i>R</i>)-carbapenem carboxylate biosynthesis
jk0454	PWY-6853	ethylene biosynthesis II (microbes)
jk0454	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
jk0468	PWY-2723	trehalose degradation V
jk0468	PWY-3801	sucrose degradation II (sucrose synthase)
jk0468	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
jk0468	PWY-5661	GDP-glucose biosynthesis
jk0468	PWY-5661-1	jk0468
jk0468	PWY-5940	streptomycin biosynthesis
jk0468	PWY-5941	glycogen degradation II (eukaryotic)
jk0468	PWY-622	starch biosynthesis
jk0468	PWY-6731	starch degradation III
jk0468	PWY-6737	starch degradation V
jk0468	PWY-6749	CMP-legionaminate biosynthesis I
jk0468	PWY-7238	sucrose biosynthesis II
jk0468	PWY-7343	UDP-glucose biosynthesis
jk0478	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
jk0478	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
jk0478	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
jk0478	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
jk0478	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
jk0478	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
jk0478	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
jk0478	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
jk0480	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
jk0480	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
jk0480	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
jk0480	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
jk0480	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
jk0480	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
jk0480	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
jk0480	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
jk0481	PWY-3781	aerobic respiration I (cytochrome c)
jk0481	PWY-4521	arsenite oxidation I (respiratory)
jk0481	PWY-6692	Fe(II) oxidation
jk0481	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
jk0492	PWY-5381	pyridine nucleotide cycling (plants)
jk0495	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
jk0496	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
jk0496	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
jk0499	PWY-7206	pyrimidine deoxyribonucleotides dephosphorylation
jk0539	PWY-4061	glutathione-mediated detoxification I
jk0539	PWY-6842	glutathione-mediated detoxification II
jk0539	PWY-7112	4-hydroxy-2-nonenal detoxification
jk0541	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
jk0541	PWY-5723	Rubisco shunt
jk0548	PWY-1622	formaldehyde assimilation I (serine pathway)
jk0548	PWY-5392	reductive TCA cycle II
jk0548	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
jk0548	PWY-5690	TCA cycle II (plants and fungi)
jk0548	PWY-5913	TCA cycle VI (obligate autotrophs)
jk0548	PWY-6728	methylaspartate cycle
jk0548	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
jk0548	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
jk0548	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
jk0551	PWY-2161	folate polyglutamylation
jk0554	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
jk0554	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
jk0554	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
jk0554	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
jk0554	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
jk0554	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
jk0554	PWY-7205	CMP phosphorylation
jk0554	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
jk0554	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
jk0554	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
jk0554	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
jk0554	PWY-7224	purine deoxyribonucleosides salvage
jk0554	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
jk0554	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
jk0567	PWY-5381	pyridine nucleotide cycling (plants)
jk0567	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
jk0588	PWY-1361	benzoyl-CoA degradation I (aerobic)
jk0588	PWY-5109	2-methylbutanoate biosynthesis
jk0588	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
jk0588	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
jk0588	PWY-5177	glutaryl-CoA degradation
jk0588	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
jk0588	PWY-6435	4-hydroxybenzoate biosynthesis V
jk0588	PWY-6583	pyruvate fermentation to butanol I
jk0588	PWY-6863	pyruvate fermentation to hexanol
jk0588	PWY-6883	pyruvate fermentation to butanol II
jk0588	PWY-6944	androstenedione degradation
jk0588	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
jk0588	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
jk0588	PWY-7007	methyl ketone biosynthesis
jk0588	PWY-7046	4-coumarate degradation (anaerobic)
jk0588	PWY-7094	fatty acid salvage
jk0588	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
jk0588	PWY-735	jasmonic acid biosynthesis
jk0588	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
jk0596	PWY-5941	glycogen degradation II (eukaryotic)
jk0596	PWY-6724	starch degradation II
jk0596	PWY-6737	starch degradation V
jk0596	PWY-7238	sucrose biosynthesis II
jk0661	PWY-6891	thiazole biosynthesis II (Bacillus)
jk0661	PWY-6892	thiazole biosynthesis I (E. coli)
jk0661	PWY-7560	methylerythritol phosphate pathway II
jk0667	PWY-5663	tetrahydrobiopterin biosynthesis I
jk0667	PWY-5664	tetrahydrobiopterin biosynthesis II
jk0667	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
jk0667	PWY-6703	preQ<sub>0</sub> biosynthesis
jk0667	PWY-6983	tetrahydrobiopterin biosynthesis III
jk0667	PWY-7442	drosopterin and aurodrosopterin biosynthesis
jk0674	PWY-6654	phosphopantothenate biosynthesis III
jk0675	PWY-381	nitrate reduction II (assimilatory)
jk0675	PWY-5675	nitrate reduction V (assimilatory)
jk0675	PWY-6549	L-glutamine biosynthesis III
jk0675	PWY-6963	ammonia assimilation cycle I
jk0675	PWY-6964	ammonia assimilation cycle II
jk0682	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
jk0702	PWY-381	nitrate reduction II (assimilatory)
jk0702	PWY-5675	nitrate reduction V (assimilatory)
jk0702	PWY-6549	L-glutamine biosynthesis III
jk0702	PWY-6963	ammonia assimilation cycle I
jk0702	PWY-6964	ammonia assimilation cycle II
jk0705	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
jk0705	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
jk0705	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
jk0706	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
jk0706	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
jk0709	PWY-5988	wound-induced proteolysis I
jk0709	PWY-6018	seed germination protein turnover
jk0710	PWY-5057	L-valine degradation II
jk0710	PWY-5076	L-leucine degradation III
jk0710	PWY-5078	L-isoleucine degradation II
jk0710	PWY-5101	L-isoleucine biosynthesis II
jk0710	PWY-5103	L-isoleucine biosynthesis III
jk0710	PWY-5104	L-isoleucine biosynthesis IV
jk0710	PWY-5108	L-isoleucine biosynthesis V
jk0711	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
jk0711	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
jk0711	PWY-6269	adenosylcobalamin salvage from cobinamide II
jk0717	PWY-3781	aerobic respiration I (cytochrome c)
jk0717	PWY-4521	arsenite oxidation I (respiratory)
jk0717	PWY-6692	Fe(II) oxidation
jk0717	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
jk0732	PWY-6164	3-dehydroquinate biosynthesis I
jk0737	PWY-2201	folate transformations I
jk0737	PWY-3841	folate transformations II
jk0746	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
jk0746	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
jk0747	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
jk0747	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
jk0747	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
jk0748	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
jk0748	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
jk0750	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
jk0750	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
jk0750	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
jk0750	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
jk0751	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
jk0751	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
jk0755	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
jk0769	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
jk0769	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
jk0770	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
jk0772	PWY-1042	glycolysis IV (plant cytosol)
jk0772	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
jk0772	PWY-5484	glycolysis II (from fructose 6-phosphate)
jk0772	PWY-5723	Rubisco shunt
jk0772	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
jk0772	PWY-6886	1-butanol autotrophic biosynthesis
jk0772	PWY-6901	superpathway of glucose and xylose degradation
jk0772	PWY-7003	glycerol degradation to butanol
jk0772	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
jk0772	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
jk0773	PWY-2661	trehalose biosynthesis V
jk0778	PWY-2661	trehalose biosynthesis V
jk0783	PWY-5316	nicotine biosynthesis
jk0783	PWY-7342	superpathway of nicotine biosynthesis
jk0784	PWY-5316	nicotine biosynthesis
jk0784	PWY-5381	pyridine nucleotide cycling (plants)
jk0784	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
jk0784	PWY-7342	superpathway of nicotine biosynthesis
jk0795	PWY-5958	acridone alkaloid biosynthesis
jk0795	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
jk0795	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
jk0801	PWY-1042	glycolysis IV (plant cytosol)
jk0801	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
jk0801	PWY-5484	glycolysis II (from fructose 6-phosphate)
jk0801	PWY-5723	Rubisco shunt
jk0801	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
jk0801	PWY-6886	1-butanol autotrophic biosynthesis
jk0801	PWY-6901	superpathway of glucose and xylose degradation
jk0801	PWY-7003	glycerol degradation to butanol
jk0801	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
jk0801	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
jk0841	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
jk0841	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
jk0842	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
jk0843	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
jk0843	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
jk0845	PWY-4981	L-proline biosynthesis II (from arginine)
jk0845	PWY-4984	urea cycle
jk0845	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
jk0847	PWY-4983	L-citrulline-nitric oxide cycle
jk0847	PWY-4984	urea cycle
jk0847	PWY-5	canavanine biosynthesis
jk0847	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
jk0847	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
jk0848	PWY-4983	L-citrulline-nitric oxide cycle
jk0848	PWY-4984	urea cycle
jk0848	PWY-5	canavanine biosynthesis
jk0848	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
jk0848	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
jk0850	PWY-6891	thiazole biosynthesis II (Bacillus)
jk0850	PWY-6892	thiazole biosynthesis I (E. coli)
jk0854	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
jk0854	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
jk0854	PWY-6897	thiamin salvage II
jk0854	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
jk0854	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
jk0854	PWY-7353	4-methyl-5(&beta;-hydroxyethyl)thiazole salvage (yeast)
jk0854	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
jk0855	PWY-6890	4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis
jk0865	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
jk0865	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
jk0865	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
jk0869	PWY-6898	thiamin salvage III
jk0869	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
jk0869	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
jk0871	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
jk0871	PWY-7177	UTP and CTP dephosphorylation II
jk0871	PWY-7185	UTP and CTP dephosphorylation I
jk0878	PWY-7205	CMP phosphorylation
jk0881	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
jk0881	PWY-2161	folate polyglutamylation
jk0881	PWY-2201	folate transformations I
jk0881	PWY-3841	folate transformations II
jk0882	PWY-1042	glycolysis IV (plant cytosol)
jk0882	PWY-5484	glycolysis II (from fructose 6-phosphate)
jk0882	PWY-6901	superpathway of glucose and xylose degradation
jk0882	PWY-7003	glycerol degradation to butanol
jk0917	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
jk0920	PWY-5667	CDP-diacylglycerol biosynthesis I
jk0920	PWY-5981	CDP-diacylglycerol biosynthesis III
jk0921	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
jk0921	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
jk0922	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
jk0922	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
jk0931	PWY-6857	retinol biosynthesis
jk0949	PWY-6829	tRNA methylation (yeast)
jk0951	PWY-5392	reductive TCA cycle II
jk0951	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
jk0951	PWY-5690	TCA cycle II (plants and fungi)
jk0951	PWY-5913	TCA cycle VI (obligate autotrophs)
jk0951	PWY-6728	methylaspartate cycle
jk0951	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
jk0951	PWY-7254	TCA cycle VII (acetate-producers)
jk0951	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
jk0959	PWY-5686	UMP biosynthesis
jk0981	PWY-6823	molybdenum cofactor biosynthesis
jk0981	PWY-6891	thiazole biosynthesis II (Bacillus)
jk0981	PWY-6892	thiazole biosynthesis I (E. coli)
jk0981	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
jk0992	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
jk0992	PWY-5723	Rubisco shunt
jk0992	PWY-6891	thiazole biosynthesis II (Bacillus)
jk0992	PWY-6892	thiazole biosynthesis I (E. coli)
jk0992	PWY-6901	superpathway of glucose and xylose degradation
jk0992	PWY-7560	methylerythritol phosphate pathway II
jk0993	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
jk0993	PWY-5723	Rubisco shunt
jk0994	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
jk0996	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
jk0996	PWY-6855	chitin degradation I (archaea)
jk0996	PWY-6906	chitin derivatives degradation
jk0998	PWY-1622	formaldehyde assimilation I (serine pathway)
jk0998	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
jk0998	PWY-5913	TCA cycle VI (obligate autotrophs)
jk0998	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
jk0998	PWY-6146	<i>Methanobacterium thermoautotrophicum</i> biosynthetic metabolism
jk0998	PWY-6549	L-glutamine biosynthesis III
jk0998	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
jk0998	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
jk0998	PWY-7124	ethylene biosynthesis V (engineered)
jk0999	PWY-1042	glycolysis IV (plant cytosol)
jk0999	PWY-5484	glycolysis II (from fructose 6-phosphate)
jk0999	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
jk0999	PWY-7003	glycerol degradation to butanol
jk1000	PWY-1042	glycolysis IV (plant cytosol)
jk1000	PWY-5484	glycolysis II (from fructose 6-phosphate)
jk1000	PWY-6886	1-butanol autotrophic biosynthesis
jk1000	PWY-6901	superpathway of glucose and xylose degradation
jk1000	PWY-7003	glycerol degradation to butanol
jk1001	PWY-1042	glycolysis IV (plant cytosol)
jk1001	PWY-5484	glycolysis II (from fructose 6-phosphate)
jk1001	PWY-6901	superpathway of glucose and xylose degradation
jk1001	PWY-7003	glycerol degradation to butanol
jk1007	PWY-6167	flavin biosynthesis II (archaea)
jk1007	PWY-6168	flavin biosynthesis III (fungi)
jk1008	PWY-6167	flavin biosynthesis II (archaea)
jk1008	PWY-6168	flavin biosynthesis III (fungi)
jk1008	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
jk1009	PWY-6167	flavin biosynthesis II (archaea)
jk1009	PWY-6168	flavin biosynthesis III (fungi)
jk1009	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
jk1011	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
jk1011	PWY-5723	Rubisco shunt
jk1016	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
jk1016	PWY-5912	2'-deoxymugineic acid phytosiderophore biosynthesis
jk1019	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
jk1021	PWY-5686	UMP biosynthesis
jk1022	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
jk1022	PWY-5686	UMP biosynthesis
jk1022	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
jk1023	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
jk1023	PWY-5686	UMP biosynthesis
jk1023	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
jk1024	PWY-5686	UMP biosynthesis
jk1025	PWY-5686	UMP biosynthesis
jk1026	PWY-7183	pyrimidine nucleobases salvage I
jk1030	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
jk1030	PWY-6416	quinate degradation II
jk1030	PWY-6707	gallate biosynthesis
jk1031	PWY-6164	3-dehydroquinate biosynthesis I
jk1032	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
jk1033	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
jk1035	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
jk1049	PWY-6605	adenine and adenosine salvage II
jk1049	PWY-6610	adenine and adenosine salvage IV
jk1058	PWY-6466	pyridoxal 5'-phosphate biosynthesis II
jk1060	PWY-6466	pyridoxal 5'-phosphate biosynthesis II
jk1074	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
jk1074	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
jk1075	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
jk1075	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
jk1078	PWY-6891	thiazole biosynthesis II (Bacillus)
jk1078	PWY-6892	thiazole biosynthesis I (E. coli)
jk1078	PWY-7560	methylerythritol phosphate pathway II
jk1082	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
jk1082	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
jk1082	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
jk1082	PWY-7206	pyrimidine deoxyribonucleotides dephosphorylation
jk1098	PWY-3821	galactose degradation III
jk1098	PWY-6317	galactose degradation I (Leloir pathway)
jk1098	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
jk1098	PWY-6527	stachyose degradation
jk1098	PWY-7328	superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
jk1098	PWY-7344	UDP-D-galactose biosynthesis
jk1103	PWY-6483	ceramide degradation
jk1103	PWY-7119	sphingolipid recycling and degradation (yeast)
jk1110	PWY-2941	L-lysine biosynthesis II
jk1110	PWY-5097	L-lysine biosynthesis VI
jk1111	PWY-2781	<i>cis</i>-zeatin biosynthesis
jk1124	PWY-5269	cardiolipin biosynthesis II
jk1124	PWY-5668	cardiolipin biosynthesis I
jk1129	PWY-2941	L-lysine biosynthesis II
jk1129	PWY-2942	L-lysine biosynthesis III
jk1129	PWY-5097	L-lysine biosynthesis VI
jk1130	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
jk1131	PWY-2941	L-lysine biosynthesis II
jk1131	PWY-2942	L-lysine biosynthesis III
jk1131	PWY-5097	L-lysine biosynthesis VI
jk1136	PWY-5523	5,6-dimethylbenzimidazole biosynthesis
jk1136	PWY-6167	flavin biosynthesis II (archaea)
jk1136	PWY-6168	flavin biosynthesis III (fungi)
jk1138	PWY-6012	acyl carrier protein metabolism I
jk1138	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
jk1149	PWY-5194	siroheme biosynthesis
jk1149	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
jk1151	PWY-7254	TCA cycle VII (acetate-producers)
jk1153	PWY-6421	arsenate detoxification III (mycothiol)
jk1165	PWY-7560	methylerythritol phosphate pathway II
jk1167	PWY-7560	methylerythritol phosphate pathway II
jk1189	PWY-3722	glycine betaine biosynthesis II (Gram-positive bacteria)
jk1189	PWY-7494	choline degradation IV
jk1190	PWY-6829	tRNA methylation (yeast)
jk1190	PWY-7285	methylwyosine biosynthesis
jk1190	PWY-7286	7-(3-amino-3-carboxypropyl)-wyosine biosynthesis
jk1215	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
jk1215	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
jk1215	PWY-6896	thiamin salvage I
jk1215	PWY-6897	thiamin salvage II
jk1217	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
jk1217	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
jk1218	PWY-5667	CDP-diacylglycerol biosynthesis I
jk1218	PWY-5981	CDP-diacylglycerol biosynthesis III
jk1268	PWY-5941	glycogen degradation II (eukaryotic)
jk1268	PWY-622	starch biosynthesis
jk1268	PWY-6731	starch degradation III
jk1268	PWY-6737	starch degradation V
jk1268	PWY-7238	sucrose biosynthesis II
jk1281	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
jk1285	PWY-5791	1,4-dihydroxy-2-naphthoate biosynthesis II (plants)
jk1285	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
jk1285	PWY-5901	2,3-dihydroxybenzoate biosynthesis
jk1285	PWY-6406	salicylate biosynthesis I
jk1288	PWY-7396	butanol and isobutanol biosynthesis (engineered)
jk1298	PWY-5101	L-isoleucine biosynthesis II
jk1298	PWY-5103	L-isoleucine biosynthesis III
jk1298	PWY-5104	L-isoleucine biosynthesis IV
jk1298	PWY-7111	pyruvate fermentation to isobutanol (engineered)
jk1299	PWY-5101	L-isoleucine biosynthesis II
jk1299	PWY-5103	L-isoleucine biosynthesis III
jk1299	PWY-5104	L-isoleucine biosynthesis IV
jk1299	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
jk1299	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
jk1299	PWY-6389	(<i>S</i>)-acetoin biosynthesis
jk1299	PWY-7111	pyruvate fermentation to isobutanol (engineered)
jk1300	PWY-5101	L-isoleucine biosynthesis II
jk1300	PWY-5103	L-isoleucine biosynthesis III
jk1300	PWY-5104	L-isoleucine biosynthesis IV
jk1300	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
jk1300	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
jk1300	PWY-6389	(<i>S</i>)-acetoin biosynthesis
jk1300	PWY-7111	pyruvate fermentation to isobutanol (engineered)
jk1303	PWY-5101	L-isoleucine biosynthesis II
jk1303	PWY-5103	L-isoleucine biosynthesis III
jk1303	PWY-5104	L-isoleucine biosynthesis IV
jk1303	PWY-7111	pyruvate fermentation to isobutanol (engineered)
jk1308	PWY-1042	glycolysis IV (plant cytosol)
jk1308	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
jk1308	PWY-5484	glycolysis II (from fructose 6-phosphate)
jk1308	PWY-7385	1,3-propanediol biosynthesis (engineered)
jk1311	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
jk1321	PWY-6823	molybdenum cofactor biosynthesis
jk1321	PWY-6891	thiazole biosynthesis II (Bacillus)
jk1321	PWY-6892	thiazole biosynthesis I (E. coli)
jk1321	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
jk1330	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
jk1330	PWY-622	starch biosynthesis
jk1335	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
jk1337	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
jk1343	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
jk1343	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
jk1343	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
jk1347	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
jk1350	PWY-702	L-methionine biosynthesis II
jk1353	PWY-2941	L-lysine biosynthesis II
jk1353	PWY-2942	L-lysine biosynthesis III
jk1353	PWY-5097	L-lysine biosynthesis VI
jk1373	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
jk1383	PWY-622	starch biosynthesis
jk1384	PWY-622	starch biosynthesis
jk1387	PWY-5988	wound-induced proteolysis I
jk1387	PWY-6018	seed germination protein turnover
jk1449	PWY-7560	methylerythritol phosphate pathway II
jk1453	PWY-5484	glycolysis II (from fructose 6-phosphate)
jk1454	PWY-5392	reductive TCA cycle II
jk1454	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
jk1454	PWY-5690	TCA cycle II (plants and fungi)
jk1454	PWY-5913	TCA cycle VI (obligate autotrophs)
jk1454	PWY-6728	methylaspartate cycle
jk1454	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
jk1454	PWY-7254	TCA cycle VII (acetate-producers)
jk1454	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
jk1465	PWY-1622	formaldehyde assimilation I (serine pathway)
jk1465	PWY-181	photorespiration
jk1465	PWY-2161	folate polyglutamylation
jk1465	PWY-2201	folate transformations I
jk1465	PWY-3661	glycine betaine degradation I
jk1465	PWY-3661-1	glycine betaine degradation II (mammalian)
jk1465	PWY-3841	folate transformations II
jk1465	PWY-5497	purine nucleobases degradation II (anaerobic)
jk1466	PWY-3961	phosphopantothenate biosynthesis II
jk1476	PWY-6938	NADH repair
jk1483	PWY-1042	glycolysis IV (plant cytosol)
jk1483	PWY-1622	formaldehyde assimilation I (serine pathway)
jk1483	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
jk1483	PWY-5484	glycolysis II (from fructose 6-phosphate)
jk1483	PWY-5723	Rubisco shunt
jk1483	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
jk1483	PWY-6886	1-butanol autotrophic biosynthesis
jk1483	PWY-6901	superpathway of glucose and xylose degradation
jk1483	PWY-7003	glycerol degradation to butanol
jk1483	PWY-7124	ethylene biosynthesis V (engineered)
jk1483	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
jk1492	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
jk1510	PWY-7560	methylerythritol phosphate pathway II
jk1524	PWY-6823	molybdenum cofactor biosynthesis
jk1551	PWY-4381	fatty acid biosynthesis initiation I
jk1551	PWY-5743	3-hydroxypropanoate cycle
jk1551	PWY-5744	glyoxylate assimilation
jk1551	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
jk1551	PWY-6679	jadomycin biosynthesis
jk1551	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
jk1556	PWY-6123	inosine-5'-phosphate biosynthesis I
jk1556	PWY-6124	inosine-5'-phosphate biosynthesis II
jk1556	PWY-7234	inosine-5'-phosphate biosynthesis III
jk1557	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
jk1557	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
jk1565	PWY-3461	L-tyrosine biosynthesis II
jk1565	PWY-3462	L-phenylalanine biosynthesis II
jk1565	PWY-6120	L-tyrosine biosynthesis III
jk1565	PWY-6627	salinosporamide A biosynthesis
jk1567	PWY-6348	phosphate acquisition
jk1567	PWY-6357	phosphate utilization in cell wall regeneration
jk1567	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
jk1567	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
jk1580	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
jk1580	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
jk1595	PWY-6823	molybdenum cofactor biosynthesis
jk1597	PWY-6823	molybdenum cofactor biosynthesis
jk1598	PWY-6823	molybdenum cofactor biosynthesis
jk1625	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
jk1636	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
jk1636	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
jk1636	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
jk1636	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
jk1636	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
jk1636	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
jk1637	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
jk1640	PWY-3861	mannitol degradation II
jk1640	PWY-3881	mannitol biosynthesis
jk1640	PWY-5659	GDP-mannose biosynthesis
jk1640	PWY-7456	mannan degradation
jk1640	PWY-882	L-ascorbate biosynthesis I (L-galactose pathway)
jk1641	PWY-6749	CMP-legionaminate biosynthesis I
jk1658	PWY-6123	inosine-5'-phosphate biosynthesis I
jk1658	PWY-7234	inosine-5'-phosphate biosynthesis III
jk1661	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
jk1661	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
jk1662	PWY-4381	fatty acid biosynthesis initiation I
jk1662	PWY-5743	3-hydroxypropanoate cycle
jk1662	PWY-5744	glyoxylate assimilation
jk1662	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
jk1662	PWY-6679	jadomycin biosynthesis
jk1662	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
jk1668	PWY-5350	thiosulfate disproportionation III (rhodanese)
jk1671	PWY-4261	glycerol degradation I
jk1674	PWY-4202	arsenate detoxification I (glutaredoxin)
jk1674	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
jk1674	PWY-6608	guanosine nucleotides degradation III
jk1674	PWY-6609	adenine and adenosine salvage III
jk1674	PWY-6611	adenine and adenosine salvage V
jk1674	PWY-6620	guanine and guanosine salvage
jk1674	PWY-6627	salinosporamide A biosynthesis
jk1674	PWY-6644	fluoroacetate and fluorothreonine biosynthesis
jk1674	PWY-7179	purine deoxyribonucleosides degradation I
jk1674	PWY-7179-1	purine deoxyribonucleosides degradation
jk1675	PWY-6749	CMP-legionaminate biosynthesis I
jk1676	PWY-7183	pyrimidine nucleobases salvage I
jk1693	PWY-5913	TCA cycle VI (obligate autotrophs)
jk1693	PWY-6549	L-glutamine biosynthesis III
jk1693	PWY-6728	methylaspartate cycle
jk1693	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
jk1693	PWY-7124	ethylene biosynthesis V (engineered)
jk1693	PWY-7254	TCA cycle VII (acetate-producers)
jk1693	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
jk1694	PWY-5344	L-homocysteine biosynthesis
jk1694	PWY-7174	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation II
jk1695	PWY-5344	L-homocysteine biosynthesis
jk1697	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
jk1697	PWY-2201	folate transformations I
jk1697	PWY-3841	folate transformations II
jk1697	PWY-5030	L-histidine degradation III
jk1697	PWY-5497	purine nucleobases degradation II (anaerobic)
jk1697	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
jk1720	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
jk1723	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
jk1723	PWY-6596	adenosine nucleotides degradation I
jk1723	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
jk1734	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
jk1735	PWY-6749	CMP-legionaminate biosynthesis I
jk1743	PWY-6749	CMP-legionaminate biosynthesis I
jk1765	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
jk1819	PWY-5901	2,3-dihydroxybenzoate biosynthesis
jk1820	PWY-5791	1,4-dihydroxy-2-naphthoate biosynthesis II (plants)
jk1820	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
jk1820	PWY-5901	2,3-dihydroxybenzoate biosynthesis
jk1820	PWY-6406	salicylate biosynthesis I
jk1865	PWY-5839	menaquinol-7 biosynthesis
jk1865	PWY-5844	menaquinol-9 biosynthesis
jk1865	PWY-5849	menaquinol-6 biosynthesis
jk1865	PWY-5890	menaquinol-10 biosynthesis
jk1865	PWY-5891	menaquinol-11 biosynthesis
jk1865	PWY-5892	menaquinol-12 biosynthesis
jk1865	PWY-5895	menaquinol-13 biosynthesis
jk1868	PWY-5791	1,4-dihydroxy-2-naphthoate biosynthesis II (plants)
jk1868	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
jk1870	PWY-5791	1,4-dihydroxy-2-naphthoate biosynthesis II (plants)
jk1870	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
jk1877	PWY-5839	menaquinol-7 biosynthesis
jk1877	PWY-5851	demethylmenaquinol-9 biosynthesis
jk1877	PWY-5852	demethylmenaquinol-8 biosynthesis I
jk1877	PWY-5853	demethylmenaquinol-6 biosynthesis I
jk1877	PWY-5890	menaquinol-10 biosynthesis
jk1877	PWY-5891	menaquinol-11 biosynthesis
jk1877	PWY-5892	menaquinol-12 biosynthesis
jk1877	PWY-5895	menaquinol-13 biosynthesis
jk1882	PWY-3221	dTDP-L-rhamnose biosynthesis II
jk1882	PWY-6808	dTDP-D-forosamine biosynthesis
jk1882	PWY-6942	dTDP-D-desosamine biosynthesis
jk1882	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
jk1882	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
jk1882	PWY-6974	dTDP-L-olivose biosynthesis
jk1882	PWY-6976	dTDP-L-mycarose biosynthesis
jk1882	PWY-7104	dTDP-L-megosamine biosynthesis
jk1882	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
jk1882	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
jk1882	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
jk1882	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
jk1882	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
jk1882	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
jk1882	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
jk1882	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
jk1888	PWY-3221	dTDP-L-rhamnose biosynthesis II
jk1888	PWY-6808	dTDP-D-forosamine biosynthesis
jk1888	PWY-6942	dTDP-D-desosamine biosynthesis
jk1888	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
jk1888	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
jk1888	PWY-6974	dTDP-L-olivose biosynthesis
jk1888	PWY-6976	dTDP-L-mycarose biosynthesis
jk1888	PWY-7104	dTDP-L-megosamine biosynthesis
jk1888	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
jk1888	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
jk1888	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
jk1888	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
jk1888	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
jk1888	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
jk1888	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
jk1888	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
jk1895	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
jk1899	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
jk1899	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
jk1900	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
jk1900	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
jk1900	PWY-5194	siroheme biosynthesis
jk1900	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
jk1901	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
jk1901	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
jk1902	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
jk1906	PWY-3341	L-proline biosynthesis III
jk1906	PWY-4981	L-proline biosynthesis II (from arginine)
jk1906	PWY-6344	L-ornithine degradation II (Stickland reaction)
jk1912	PWY-1622	formaldehyde assimilation I (serine pathway)
jk1912	PWY-5484	glycolysis II (from fructose 6-phosphate)
jk1919	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
jk1919	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
jk1923	PWY-7180	2'-deoxy-&alpha;-D-ribose 1-phosphate degradation
jk1927	PWY-3781	aerobic respiration I (cytochrome c)
jk1927	PWY-4302	aerobic respiration III (alternative oxidase pathway)
jk1927	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
jk1927	PWY-5690	TCA cycle II (plants and fungi)
jk1927	PWY-6728	methylaspartate cycle
jk1927	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
jk1927	PWY-7254	TCA cycle VII (acetate-producers)
jk1927	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
jk1928	PWY-3781	aerobic respiration I (cytochrome c)
jk1928	PWY-4302	aerobic respiration III (alternative oxidase pathway)
jk1928	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
jk1928	PWY-5690	TCA cycle II (plants and fungi)
jk1928	PWY-6728	methylaspartate cycle
jk1928	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
jk1928	PWY-7254	TCA cycle VII (acetate-producers)
jk1928	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
jk1932	PWY-6728	methylaspartate cycle
jk1932	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
jk1932	PWY-7118	chitin degradation to ethanol
jk1932	PWY-7294	xylose degradation IV
jk1932	PWY-7295	L-arabinose degradation IV
jk1933	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
jk1936	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
jk1936	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
jk1941	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
jk1941	PWY-6837	fatty acid beta-oxidation V (unsaturated, odd number, di-isomerase-dependent)
jk1941	PWY-6920	6-gingerol analog biosynthesis
jk1941	PWY-7007	methyl ketone biosynthesis
jk1941	PWY-7288	fatty acid &beta;-oxidation (peroxisome, yeast)
jk1941	PWY-7291	oleate &beta;-oxidation (isomerase-dependent, yeast)
jk1941	PWY-7337	10-<i>cis</i>-heptadecenoyl-CoA degradation (yeast)
jk1941	PWY-7338	10-<i>trans</i>-heptadecenoyl-CoA degradation (reductase-dependent, yeast)
jk1941	PWY-7340	9-<i>cis</i>, 11-<i>trans</i>-octadecadienoyl-CoA degradation (isomerase-dependent, yeast)
jk1941	PWY-735	jasmonic acid biosynthesis
jk1948	PWY-6167	flavin biosynthesis II (archaea)
jk1948	PWY-6168	flavin biosynthesis III (fungi)
jk1957	PWY-6857	retinol biosynthesis
jk1994	PWY-5506	methanol oxidation to formaldehyde IV
jk1997	PWY-2941	L-lysine biosynthesis II
jk1997	PWY-2942	L-lysine biosynthesis III
jk1997	PWY-5097	L-lysine biosynthesis VI
jk1997	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
jk1997	PWY-6559	spermidine biosynthesis II
jk1997	PWY-6562	norspermidine biosynthesis
jk1997	PWY-7153	grixazone biosynthesis
jk1997	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
jk1998	PWY-2941	L-lysine biosynthesis II
jk1998	PWY-2942	L-lysine biosynthesis III
jk1998	PWY-5097	L-lysine biosynthesis VI
jk1998	PWY-6559	spermidine biosynthesis II
jk1998	PWY-6562	norspermidine biosynthesis
jk1998	PWY-7153	grixazone biosynthesis
jk2002	PWY-6871	3-methylbutanol biosynthesis
jk2020	PWY-6700	queuosine biosynthesis
jk2049	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
jk2049	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
jk2071	PWY-2301	<i>myo</i>-inositol biosynthesis
jk2071	PWY-4661	1D-<i>myo</i>-inositol hexakisphosphate biosynthesis III (<i>Spirodela polyrrhiza</i>)
jk2071	PWY-6372	1D-<i>myo</i>-inositol hexakisphosphate biosynthesis IV (<i>Dictyostelium</i>)
jk2071	PWY-6580	phosphatidylinositol biosynthesis I (bacteria)
jk2071	PWY-6664	di-myo-inositol phosphate biosynthesis
