Cp3995_0026	PWY-3561	choline biosynthesis III
Cp3995_0026	PWY-7039	phosphatidate metabolism, as a signaling molecule
Cp3995_0062	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
Cp3995_0065	PWY-6617	adenosine nucleotides degradation III
Cp3995_0068	PWY-2301	<i>myo</i>-inositol biosynthesis
Cp3995_0068	PWY-4661	1D-<i>myo</i>-inositol hexakisphosphate biosynthesis III (<i>Spirodela polyrrhiza</i>)
Cp3995_0068	PWY-6372	1D-<i>myo</i>-inositol hexakisphosphate biosynthesis IV (<i>Dictyostelium</i>)
Cp3995_0068	PWY-6580	phosphatidylinositol biosynthesis I (bacteria)
Cp3995_0068	PWY-6664	di-myo-inositol phosphate biosynthesis
Cp3995_0084	PWY-7310	D-glucosaminate degradation
Cp3995_0096	PWY-4261	glycerol degradation I
Cp3995_0106	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Cp3995_0106	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Cp3995_0128	PWY-3781	aerobic respiration I (cytochrome c)
Cp3995_0128	PWY-4521	arsenite oxidation I (respiratory)
Cp3995_0128	PWY-6692	Fe(II) oxidation
Cp3995_0128	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Cp3995_0133	PWY-7303	3-dimethylallyl-4-hydroxybenzoate biosynthesis
Cp3995_0137	PWY-6700	queuosine biosynthesis
Cp3995_0140	PWY-5530	sorbitol biosynthesis II
Cp3995_0140	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Cp3995_0160	PWY-6871	3-methylbutanol biosynthesis
Cp3995_0162	PWY-4202	arsenate detoxification I (glutaredoxin)
Cp3995_0162	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
Cp3995_0162	PWY-6608	guanosine nucleotides degradation III
Cp3995_0162	PWY-6609	adenine and adenosine salvage III
Cp3995_0162	PWY-6611	adenine and adenosine salvage V
Cp3995_0162	PWY-6620	guanine and guanosine salvage
Cp3995_0162	PWY-6627	salinosporamide A biosynthesis
Cp3995_0162	PWY-6644	fluoroacetate and fluorothreonine biosynthesis
Cp3995_0162	PWY-7179	purine deoxyribonucleosides degradation I
Cp3995_0162	PWY-7179-1	purine deoxyribonucleosides degradation
Cp3995_0164	PWY-7180	2'-deoxy-&alpha;-D-ribose 1-phosphate degradation
Cp3995_0165	PWY-6749	CMP-legionaminate biosynthesis I
Cp3995_0172	PWY-2941	L-lysine biosynthesis II
Cp3995_0172	PWY-2942	L-lysine biosynthesis III
Cp3995_0172	PWY-5097	L-lysine biosynthesis VI
Cp3995_0172	PWY-6559	spermidine biosynthesis II
Cp3995_0172	PWY-6562	norspermidine biosynthesis
Cp3995_0172	PWY-7153	grixazone biosynthesis
Cp3995_0175	PWY-2941	L-lysine biosynthesis II
Cp3995_0175	PWY-2942	L-lysine biosynthesis III
Cp3995_0175	PWY-5097	L-lysine biosynthesis VI
Cp3995_0175	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Cp3995_0175	PWY-6559	spermidine biosynthesis II
Cp3995_0175	PWY-6562	norspermidine biosynthesis
Cp3995_0175	PWY-7153	grixazone biosynthesis
Cp3995_0175	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Cp3995_0177	PWY-5506	methanol oxidation to formaldehyde IV
Cp3995_0235	PWY-3221	dTDP-L-rhamnose biosynthesis II
Cp3995_0235	PWY-6808	dTDP-D-forosamine biosynthesis
Cp3995_0235	PWY-6942	dTDP-D-desosamine biosynthesis
Cp3995_0235	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
Cp3995_0235	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
Cp3995_0235	PWY-6974	dTDP-L-olivose biosynthesis
Cp3995_0235	PWY-6976	dTDP-L-mycarose biosynthesis
Cp3995_0235	PWY-7104	dTDP-L-megosamine biosynthesis
Cp3995_0235	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
Cp3995_0235	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
Cp3995_0235	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
Cp3995_0235	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
Cp3995_0235	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
Cp3995_0235	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
Cp3995_0235	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
Cp3995_0235	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
Cp3995_0237	PWY-3221	dTDP-L-rhamnose biosynthesis II
Cp3995_0237	PWY-6808	dTDP-D-forosamine biosynthesis
Cp3995_0237	PWY-6942	dTDP-D-desosamine biosynthesis
Cp3995_0237	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
Cp3995_0237	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
Cp3995_0237	PWY-6974	dTDP-L-olivose biosynthesis
Cp3995_0237	PWY-6976	dTDP-L-mycarose biosynthesis
Cp3995_0237	PWY-7104	dTDP-L-megosamine biosynthesis
Cp3995_0237	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
Cp3995_0237	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
Cp3995_0237	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
Cp3995_0237	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
Cp3995_0237	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
Cp3995_0237	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
Cp3995_0237	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
Cp3995_0237	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
Cp3995_0242	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
Cp3995_0242	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
Cp3995_0245	PWY-3781	aerobic respiration I (cytochrome c)
Cp3995_0245	PWY-4302	aerobic respiration III (alternative oxidase pathway)
Cp3995_0245	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
Cp3995_0245	PWY-5690	TCA cycle II (plants and fungi)
Cp3995_0245	PWY-6728	methylaspartate cycle
Cp3995_0245	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Cp3995_0245	PWY-7254	TCA cycle VII (acetate-producers)
Cp3995_0245	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Cp3995_0246	PWY-3781	aerobic respiration I (cytochrome c)
Cp3995_0246	PWY-4302	aerobic respiration III (alternative oxidase pathway)
Cp3995_0246	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
Cp3995_0246	PWY-5690	TCA cycle II (plants and fungi)
Cp3995_0246	PWY-6728	methylaspartate cycle
Cp3995_0246	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Cp3995_0246	PWY-7254	TCA cycle VII (acetate-producers)
Cp3995_0246	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Cp3995_0254	PWY-5480	pyruvate fermentation to ethanol I
Cp3995_0254	PWY-5485	pyruvate fermentation to acetate IV
Cp3995_0254	PWY-5493	reductive monocarboxylic acid cycle
Cp3995_0257	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Cp3995_0257	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Cp3995_0260	PWY-1622	formaldehyde assimilation I (serine pathway)
Cp3995_0260	PWY-5484	glycolysis II (from fructose 6-phosphate)
Cp3995_0266	PWY-3341	L-proline biosynthesis III
Cp3995_0266	PWY-4981	L-proline biosynthesis II (from arginine)
Cp3995_0266	PWY-6344	L-ornithine degradation II (Stickland reaction)
Cp3995_0274	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Cp3995_0275	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Cp3995_0275	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
Cp3995_0276	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Cp3995_0276	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
Cp3995_0276	PWY-5194	siroheme biosynthesis
Cp3995_0276	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
Cp3995_0277	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Cp3995_0277	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
Cp3995_0280	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
Cp3995_0280	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
Cp3995_0281	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
Cp3995_0281	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
Cp3995_0283	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Cp3995_0295	PWY-5839	menaquinol-7 biosynthesis
Cp3995_0295	PWY-5851	demethylmenaquinol-9 biosynthesis
Cp3995_0295	PWY-5852	demethylmenaquinol-8 biosynthesis I
Cp3995_0295	PWY-5853	demethylmenaquinol-6 biosynthesis I
Cp3995_0295	PWY-5890	menaquinol-10 biosynthesis
Cp3995_0295	PWY-5891	menaquinol-11 biosynthesis
Cp3995_0295	PWY-5892	menaquinol-12 biosynthesis
Cp3995_0295	PWY-5895	menaquinol-13 biosynthesis
Cp3995_0297	PWY-5791	1,4-dihydroxy-2-naphthoate biosynthesis II (plants)
Cp3995_0297	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
Cp3995_0300	PWY-5791	1,4-dihydroxy-2-naphthoate biosynthesis II (plants)
Cp3995_0300	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
Cp3995_0303	PWY-5839	menaquinol-7 biosynthesis
Cp3995_0303	PWY-5844	menaquinol-9 biosynthesis
Cp3995_0303	PWY-5849	menaquinol-6 biosynthesis
Cp3995_0303	PWY-5890	menaquinol-10 biosynthesis
Cp3995_0303	PWY-5891	menaquinol-11 biosynthesis
Cp3995_0303	PWY-5892	menaquinol-12 biosynthesis
Cp3995_0303	PWY-5895	menaquinol-13 biosynthesis
Cp3995_0333	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
Cp3995_0333	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Cp3995_0333	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Cp3995_0372	PWY-6348	phosphate acquisition
Cp3995_0372	PWY-6357	phosphate utilization in cell wall regeneration
Cp3995_0372	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
Cp3995_0372	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
Cp3995_0389	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Cp3995_0411	PWY-6749	CMP-legionaminate biosynthesis I
Cp3995_0417	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
Cp3995_0419	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Cp3995_0419	PWY-5723	Rubisco shunt
Cp3995_0429	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
Cp3995_0429	PWY-6596	adenosine nucleotides degradation I
Cp3995_0429	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
Cp3995_0432	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
Cp3995_0453	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
Cp3995_0453	PWY-2201	folate transformations I
Cp3995_0453	PWY-3841	folate transformations II
Cp3995_0453	PWY-5030	L-histidine degradation III
Cp3995_0453	PWY-5497	purine nucleobases degradation II (anaerobic)
Cp3995_0453	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
Cp3995_0455	PWY-5344	L-homocysteine biosynthesis
Cp3995_0464	PWY-5913	TCA cycle VI (obligate autotrophs)
Cp3995_0464	PWY-6549	L-glutamine biosynthesis III
Cp3995_0464	PWY-6728	methylaspartate cycle
Cp3995_0464	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Cp3995_0464	PWY-7124	ethylene biosynthesis V (engineered)
Cp3995_0464	PWY-7254	TCA cycle VII (acetate-producers)
Cp3995_0464	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
Cp3995_0476	PWY-7183	pyrimidine nucleobases salvage I
Cp3995_0478	PWY-6749	CMP-legionaminate biosynthesis I
Cp3995_0481	PWY-5750	itaconate biosynthesis
Cp3995_0481	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Cp3995_0481	PWY-6146	<i>Methanobacterium thermoautotrophicum</i> biosynthetic metabolism
Cp3995_0485	PWY-5350	thiosulfate disproportionation III (rhodanese)
Cp3995_0494	PWY-4381	fatty acid biosynthesis initiation I
Cp3995_0494	PWY-5743	3-hydroxypropanoate cycle
Cp3995_0494	PWY-5744	glyoxylate assimilation
Cp3995_0494	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Cp3995_0494	PWY-6679	jadomycin biosynthesis
Cp3995_0494	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Cp3995_0495	PWY-4381	fatty acid biosynthesis initiation I
Cp3995_0495	PWY-5743	3-hydroxypropanoate cycle
Cp3995_0495	PWY-5744	glyoxylate assimilation
Cp3995_0495	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Cp3995_0495	PWY-6679	jadomycin biosynthesis
Cp3995_0495	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Cp3995_0497	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
Cp3995_0497	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
Cp3995_0500	PWY-6123	inosine-5'-phosphate biosynthesis I
Cp3995_0500	PWY-7234	inosine-5'-phosphate biosynthesis III
Cp3995_0514	PWY-6749	CMP-legionaminate biosynthesis I
Cp3995_0517	PWY-3861	mannitol degradation II
Cp3995_0517	PWY-3881	mannitol biosynthesis
Cp3995_0517	PWY-5659	GDP-mannose biosynthesis
Cp3995_0517	PWY-7456	mannan degradation
Cp3995_0517	PWY-882	L-ascorbate biosynthesis I (L-galactose pathway)
Cp3995_0521	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
Cp3995_0522	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
Cp3995_0522	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Cp3995_0522	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
Cp3995_0522	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
Cp3995_0522	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
Cp3995_0522	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
Cp3995_0535	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Cp3995_0569	PWY-6523	nitrite-dependent anaerobic methane oxidation
Cp3995_0569	PWY-6748	nitrate reduction VII (denitrification)
Cp3995_0569	PWY-7084	nitrifier denitrification
Cp3995_0578	PWY-4381	fatty acid biosynthesis initiation I
Cp3995_0578	PWY-5743	3-hydroxypropanoate cycle
Cp3995_0578	PWY-5744	glyoxylate assimilation
Cp3995_0578	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Cp3995_0578	PWY-6679	jadomycin biosynthesis
Cp3995_0578	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Cp3995_0590	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
Cp3995_0590	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Cp3995_0590	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
Cp3995_0590	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
Cp3995_0617	PWY-4381	fatty acid biosynthesis initiation I
Cp3995_0617	PWY-5743	3-hydroxypropanoate cycle
Cp3995_0617	PWY-5744	glyoxylate assimilation
Cp3995_0617	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Cp3995_0617	PWY-6679	jadomycin biosynthesis
Cp3995_0617	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Cp3995_0619	PWY-6854	ethylene biosynthesis III (microbes)
Cp3995_0640	PWY-7376	cob(II)yrinate <i>a,c</i>-diamide biosynthesis II (late cobalt incorporation)
Cp3995_0642	PWY-3841	folate transformations II
Cp3995_0642	PWY-6614	tetrahydrofolate biosynthesis
Cp3995_0643	PWY-3841	folate transformations II
Cp3995_0643	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Cp3995_0643	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
Cp3995_0643	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
Cp3995_0643	PWY-7199	pyrimidine deoxyribonucleosides salvage
Cp3995_0643	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
Cp3995_0649	PWY-3801	sucrose degradation II (sucrose synthase)
Cp3995_0649	PWY-5054	sorbitol biosynthesis I
Cp3995_0649	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
Cp3995_0649	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
Cp3995_0649	PWY-5659	GDP-mannose biosynthesis
Cp3995_0649	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Cp3995_0649	PWY-621	sucrose degradation III (sucrose invertase)
Cp3995_0649	PWY-622	starch biosynthesis
Cp3995_0649	PWY-6531	mannitol cycle
Cp3995_0649	PWY-6981	chitin biosynthesis
Cp3995_0649	PWY-7238	sucrose biosynthesis II
Cp3995_0649	PWY-7347	sucrose biosynthesis III
Cp3995_0649	PWY-7385	1,3-propanediol biosynthesis (engineered)
Cp3995_0651	PWY-3461	L-tyrosine biosynthesis II
Cp3995_0651	PWY-3462	L-phenylalanine biosynthesis II
Cp3995_0651	PWY-6120	L-tyrosine biosynthesis III
Cp3995_0651	PWY-6627	salinosporamide A biosynthesis
Cp3995_0655	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Cp3995_0655	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
Cp3995_0656	PWY-6123	inosine-5'-phosphate biosynthesis I
Cp3995_0656	PWY-6124	inosine-5'-phosphate biosynthesis II
Cp3995_0656	PWY-7234	inosine-5'-phosphate biosynthesis III
Cp3995_0680	PWY-6823	molybdenum cofactor biosynthesis
Cp3995_0694	PWY-7560	methylerythritol phosphate pathway II
Cp3995_0704	PWY-1042	glycolysis IV (plant cytosol)
Cp3995_0704	PWY-5484	glycolysis II (from fructose 6-phosphate)
Cp3995_0704	PWY-6901	superpathway of glucose and xylose degradation
Cp3995_0704	PWY-7003	glycerol degradation to butanol
Cp3995_0711	PWY-723	alkylnitronates degradation
Cp3995_0715	PWY-842	starch degradation I
Cp3995_0717	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
Cp3995_0725	PWY-1042	glycolysis IV (plant cytosol)
Cp3995_0725	PWY-1622	formaldehyde assimilation I (serine pathway)
Cp3995_0725	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
Cp3995_0725	PWY-5484	glycolysis II (from fructose 6-phosphate)
Cp3995_0725	PWY-5723	Rubisco shunt
Cp3995_0725	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Cp3995_0725	PWY-6886	1-butanol autotrophic biosynthesis
Cp3995_0725	PWY-6901	superpathway of glucose and xylose degradation
Cp3995_0725	PWY-7003	glycerol degradation to butanol
Cp3995_0725	PWY-7124	ethylene biosynthesis V (engineered)
Cp3995_0725	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
Cp3995_0739	PWY-3961	phosphopantothenate biosynthesis II
Cp3995_0740	PWY-1622	formaldehyde assimilation I (serine pathway)
Cp3995_0740	PWY-181	photorespiration
Cp3995_0740	PWY-2161	folate polyglutamylation
Cp3995_0740	PWY-2201	folate transformations I
Cp3995_0740	PWY-3661	glycine betaine degradation I
Cp3995_0740	PWY-3661-1	glycine betaine degradation II (mammalian)
Cp3995_0740	PWY-3841	folate transformations II
Cp3995_0740	PWY-5497	purine nucleobases degradation II (anaerobic)
Cp3995_0749	PWY-5392	reductive TCA cycle II
Cp3995_0749	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
Cp3995_0749	PWY-5690	TCA cycle II (plants and fungi)
Cp3995_0749	PWY-5913	TCA cycle VI (obligate autotrophs)
Cp3995_0749	PWY-6728	methylaspartate cycle
Cp3995_0749	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Cp3995_0749	PWY-7254	TCA cycle VII (acetate-producers)
Cp3995_0749	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Cp3995_0750	PWY-5484	glycolysis II (from fructose 6-phosphate)
Cp3995_0754	PWY-7560	methylerythritol phosphate pathway II
Cp3995_0765	PWY-6654	phosphopantothenate biosynthesis III
Cp3995_0776	PWY-4202	arsenate detoxification I (glutaredoxin)
Cp3995_0776	PWY-4621	arsenate detoxification II (glutaredoxin)
Cp3995_0793	PWY-6614	tetrahydrofolate biosynthesis
Cp3995_0799	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
Cp3995_0800	PWY-622	starch biosynthesis
Cp3995_0801	PWY-622	starch biosynthesis
Cp3995_0810	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
Cp3995_0813	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Cp3995_0821	PWY-6317	galactose degradation I (Leloir pathway)
Cp3995_0821	PWY-6527	stachyose degradation
Cp3995_0822	PWY-3821	galactose degradation III
Cp3995_0822	PWY-6317	galactose degradation I (Leloir pathway)
Cp3995_0822	PWY-6527	stachyose degradation
Cp3995_0845	PWY-2941	L-lysine biosynthesis II
Cp3995_0845	PWY-2942	L-lysine biosynthesis III
Cp3995_0845	PWY-5097	L-lysine biosynthesis VI
Cp3995_0847	PWY-702	L-methionine biosynthesis II
Cp3995_0850	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Cp3995_0854	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
Cp3995_0854	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
Cp3995_0854	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
Cp3995_0861	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Cp3995_0863	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Cp3995_0867	PWY-5743	3-hydroxypropanoate cycle
Cp3995_0867	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Cp3995_0867	PWY-6728	methylaspartate cycle
Cp3995_0867	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Cp3995_0870	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
Cp3995_0870	PWY-622	starch biosynthesis
Cp3995_0877	PWY-6823	molybdenum cofactor biosynthesis
Cp3995_0877	PWY-6891	thiazole biosynthesis II (Bacillus)
Cp3995_0877	PWY-6892	thiazole biosynthesis I (E. coli)
Cp3995_0877	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
Cp3995_0885	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
Cp3995_0893	PWY-1042	glycolysis IV (plant cytosol)
Cp3995_0893	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Cp3995_0893	PWY-5484	glycolysis II (from fructose 6-phosphate)
Cp3995_0893	PWY-7385	1,3-propanediol biosynthesis (engineered)
Cp3995_0900	PWY-5101	L-isoleucine biosynthesis II
Cp3995_0900	PWY-5103	L-isoleucine biosynthesis III
Cp3995_0900	PWY-5104	L-isoleucine biosynthesis IV
Cp3995_0900	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Cp3995_0901	PWY-5101	L-isoleucine biosynthesis II
Cp3995_0901	PWY-5103	L-isoleucine biosynthesis III
Cp3995_0901	PWY-5104	L-isoleucine biosynthesis IV
Cp3995_0901	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Cp3995_0905	PWY-5101	L-isoleucine biosynthesis II
Cp3995_0905	PWY-5103	L-isoleucine biosynthesis III
Cp3995_0905	PWY-5104	L-isoleucine biosynthesis IV
Cp3995_0905	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
Cp3995_0905	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
Cp3995_0905	PWY-6389	(<i>S</i>)-acetoin biosynthesis
Cp3995_0905	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Cp3995_0906	PWY-5101	L-isoleucine biosynthesis II
Cp3995_0906	PWY-5103	L-isoleucine biosynthesis III
Cp3995_0906	PWY-5104	L-isoleucine biosynthesis IV
Cp3995_0906	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Cp3995_0911	PWY-7396	butanol and isobutanol biosynthesis (engineered)
Cp3995_0916	PWY-5791	1,4-dihydroxy-2-naphthoate biosynthesis II (plants)
Cp3995_0916	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
Cp3995_0916	PWY-5901	2,3-dihydroxybenzoate biosynthesis
Cp3995_0916	PWY-6406	salicylate biosynthesis I
Cp3995_0917	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Cp3995_0922	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
Cp3995_0928	PWY-5667	CDP-diacylglycerol biosynthesis I
Cp3995_0928	PWY-5981	CDP-diacylglycerol biosynthesis III
Cp3995_0929	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Cp3995_0929	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Cp3995_0931	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
Cp3995_0931	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
Cp3995_0931	PWY-6896	thiamin salvage I
Cp3995_0931	PWY-6897	thiamin salvage II
Cp3995_0948	PWY-7310	D-glucosaminate degradation
Cp3995_0964	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Cp3995_0964	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Cp3995_0965	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Cp3995_0966	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Cp3995_0967	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Cp3995_0967	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Cp3995_0970	PWY-4981	L-proline biosynthesis II (from arginine)
Cp3995_0970	PWY-4984	urea cycle
Cp3995_0970	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Cp3995_0972	PWY-4983	L-citrulline-nitric oxide cycle
Cp3995_0972	PWY-4984	urea cycle
Cp3995_0972	PWY-5	canavanine biosynthesis
Cp3995_0972	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Cp3995_0972	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Cp3995_0973	PWY-4983	L-citrulline-nitric oxide cycle
Cp3995_0973	PWY-4984	urea cycle
Cp3995_0973	PWY-5	canavanine biosynthesis
Cp3995_0973	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Cp3995_0973	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Cp3995_0982	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
Cp3995_0982	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
Cp3995_0982	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
Cp3995_0984	PWY-6898	thiamin salvage III
Cp3995_0984	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
Cp3995_0984	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
Cp3995_0993	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
Cp3995_0996	PWY-7193	pyrimidine ribonucleosides salvage I
Cp3995_0996	PWY-7205	CMP phosphorylation
Cp3995_1043	PWY-6683	sulfate reduction III (assimilatory)
Cp3995_1045	PWY-5194	siroheme biosynthesis
Cp3995_1045	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
Cp3995_1047	PWY-5194	siroheme biosynthesis
Cp3995_1047	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
Cp3995_1048	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
Cp3995_1060	PWY-6829	tRNA methylation (yeast)
Cp3995_1065	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
Cp3995_1065	PWY-2161	folate polyglutamylation
Cp3995_1065	PWY-2201	folate transformations I
Cp3995_1065	PWY-3841	folate transformations II
Cp3995_1066	PWY-5392	reductive TCA cycle II
Cp3995_1066	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
Cp3995_1066	PWY-5690	TCA cycle II (plants and fungi)
Cp3995_1066	PWY-5913	TCA cycle VI (obligate autotrophs)
Cp3995_1066	PWY-6728	methylaspartate cycle
Cp3995_1066	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Cp3995_1066	PWY-7254	TCA cycle VII (acetate-producers)
Cp3995_1066	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Cp3995_1072	PWY-2201	folate transformations I
Cp3995_1072	PWY-3841	folate transformations II
Cp3995_1078	PWY-5686	UMP biosynthesis
Cp3995_1090	PWY-5743	3-hydroxypropanoate cycle
Cp3995_1090	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Cp3995_1090	PWY-6728	methylaspartate cycle
Cp3995_1090	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Cp3995_1091	PWY-5743	3-hydroxypropanoate cycle
Cp3995_1091	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Cp3995_1091	PWY-6728	methylaspartate cycle
Cp3995_1091	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Cp3995_1112	PWY-6823	molybdenum cofactor biosynthesis
Cp3995_1112	PWY-6891	thiazole biosynthesis II (Bacillus)
Cp3995_1112	PWY-6892	thiazole biosynthesis I (E. coli)
Cp3995_1112	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
Cp3995_1122	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Cp3995_1122	PWY-5723	Rubisco shunt
Cp3995_1122	PWY-6891	thiazole biosynthesis II (Bacillus)
Cp3995_1122	PWY-6892	thiazole biosynthesis I (E. coli)
Cp3995_1122	PWY-6901	superpathway of glucose and xylose degradation
Cp3995_1122	PWY-7560	methylerythritol phosphate pathway II
Cp3995_1123	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Cp3995_1123	PWY-5723	Rubisco shunt
Cp3995_1124	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
Cp3995_1126	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
Cp3995_1126	PWY-6855	chitin degradation I (archaea)
Cp3995_1126	PWY-6906	chitin derivatives degradation
Cp3995_1128	PWY-1622	formaldehyde assimilation I (serine pathway)
Cp3995_1128	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
Cp3995_1128	PWY-5913	TCA cycle VI (obligate autotrophs)
Cp3995_1128	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Cp3995_1128	PWY-6146	<i>Methanobacterium thermoautotrophicum</i> biosynthetic metabolism
Cp3995_1128	PWY-6549	L-glutamine biosynthesis III
Cp3995_1128	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
Cp3995_1128	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
Cp3995_1128	PWY-7124	ethylene biosynthesis V (engineered)
Cp3995_1129	PWY-1042	glycolysis IV (plant cytosol)
Cp3995_1129	PWY-5484	glycolysis II (from fructose 6-phosphate)
Cp3995_1129	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Cp3995_1129	PWY-7003	glycerol degradation to butanol
Cp3995_1130	PWY-1042	glycolysis IV (plant cytosol)
Cp3995_1130	PWY-5484	glycolysis II (from fructose 6-phosphate)
Cp3995_1130	PWY-6886	1-butanol autotrophic biosynthesis
Cp3995_1130	PWY-6901	superpathway of glucose and xylose degradation
Cp3995_1130	PWY-7003	glycerol degradation to butanol
Cp3995_1131	PWY-1042	glycolysis IV (plant cytosol)
Cp3995_1131	PWY-5484	glycolysis II (from fructose 6-phosphate)
Cp3995_1131	PWY-6901	superpathway of glucose and xylose degradation
Cp3995_1131	PWY-7003	glycerol degradation to butanol
Cp3995_1137	PWY-6167	flavin biosynthesis II (archaea)
Cp3995_1137	PWY-6168	flavin biosynthesis III (fungi)
Cp3995_1138	PWY-6167	flavin biosynthesis II (archaea)
Cp3995_1138	PWY-6168	flavin biosynthesis III (fungi)
Cp3995_1138	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
Cp3995_1139	PWY-6167	flavin biosynthesis II (archaea)
Cp3995_1139	PWY-6168	flavin biosynthesis III (fungi)
Cp3995_1139	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Cp3995_1141	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Cp3995_1141	PWY-5723	Rubisco shunt
Cp3995_1146	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
Cp3995_1146	PWY-5912	2'-deoxymugineic acid phytosiderophore biosynthesis
Cp3995_1149	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
Cp3995_1152	PWY-5686	UMP biosynthesis
Cp3995_1153	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Cp3995_1153	PWY-5686	UMP biosynthesis
Cp3995_1153	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Cp3995_1154	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Cp3995_1154	PWY-5686	UMP biosynthesis
Cp3995_1154	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Cp3995_1155	PWY-5686	UMP biosynthesis
Cp3995_1156	PWY-5686	UMP biosynthesis
Cp3995_1157	PWY-7183	pyrimidine nucleobases salvage I
Cp3995_1164	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Cp3995_1164	PWY-6416	quinate degradation II
Cp3995_1164	PWY-6707	gallate biosynthesis
Cp3995_1165	PWY-6164	3-dehydroquinate biosynthesis I
Cp3995_1166	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Cp3995_1167	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Cp3995_1169	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Cp3995_1169	PWY-6164	3-dehydroquinate biosynthesis I
Cp3995_1169	PWY-6416	quinate degradation II
Cp3995_1169	PWY-6707	gallate biosynthesis
Cp3995_1193	PWY-6605	adenine and adenosine salvage II
Cp3995_1193	PWY-6610	adenine and adenosine salvage IV
Cp3995_1206	PWY-6578	8-amino-7-oxononanoate biosynthesis III
Cp3995_1225	PWY-6891	thiazole biosynthesis II (Bacillus)
Cp3995_1225	PWY-6892	thiazole biosynthesis I (E. coli)
Cp3995_1225	PWY-7560	methylerythritol phosphate pathway II
Cp3995_1229	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
Cp3995_1229	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Cp3995_1229	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
Cp3995_1229	PWY-7206	pyrimidine deoxyribonucleotides dephosphorylation
Cp3995_1245	PWY-3821	galactose degradation III
Cp3995_1245	PWY-6317	galactose degradation I (Leloir pathway)
Cp3995_1245	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
Cp3995_1245	PWY-6527	stachyose degradation
Cp3995_1245	PWY-7328	superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
Cp3995_1245	PWY-7344	UDP-D-galactose biosynthesis
Cp3995_1264	PWY-7310	D-glucosaminate degradation
Cp3995_1273	PWY-2941	L-lysine biosynthesis II
Cp3995_1273	PWY-5097	L-lysine biosynthesis VI
Cp3995_1274	PWY-2781	<i>cis</i>-zeatin biosynthesis
Cp3995_1289	PWY-5269	cardiolipin biosynthesis II
Cp3995_1289	PWY-5668	cardiolipin biosynthesis I
Cp3995_1297	PWY-2941	L-lysine biosynthesis II
Cp3995_1297	PWY-2942	L-lysine biosynthesis III
Cp3995_1297	PWY-5097	L-lysine biosynthesis VI
Cp3995_1298	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
Cp3995_1300	PWY-2941	L-lysine biosynthesis II
Cp3995_1300	PWY-2942	L-lysine biosynthesis III
Cp3995_1300	PWY-5097	L-lysine biosynthesis VI
Cp3995_1305	PWY-5523	5,6-dimethylbenzimidazole biosynthesis
Cp3995_1305	PWY-6167	flavin biosynthesis II (archaea)
Cp3995_1305	PWY-6168	flavin biosynthesis III (fungi)
Cp3995_1307	PWY-6012	acyl carrier protein metabolism I
Cp3995_1307	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
Cp3995_1319	PWY-5194	siroheme biosynthesis
Cp3995_1319	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
Cp3995_1324	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
Cp3995_1324	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
Cp3995_1324	PWY-6268	adenosylcobalamin salvage from cobalamin
Cp3995_1324	PWY-6269	adenosylcobalamin salvage from cobinamide II
Cp3995_1327	PWY-7254	TCA cycle VII (acetate-producers)
Cp3995_1329	PWY-6421	arsenate detoxification III (mycothiol)
Cp3995_1335	PWY-7560	methylerythritol phosphate pathway II
Cp3995_1337	PWY-7560	methylerythritol phosphate pathway II
Cp3995_1357	PWY-7310	D-glucosaminate degradation
Cp3995_1359	PWY-6829	tRNA methylation (yeast)
Cp3995_1359	PWY-7285	methylwyosine biosynthesis
Cp3995_1359	PWY-7286	7-(3-amino-3-carboxypropyl)-wyosine biosynthesis
Cp3995_1382	PWY-5941	glycogen degradation II (eukaryotic)
Cp3995_1382	PWY-622	starch biosynthesis
Cp3995_1382	PWY-6731	starch degradation III
Cp3995_1382	PWY-6737	starch degradation V
Cp3995_1382	PWY-7238	sucrose biosynthesis II
Cp3995_1385	PWY-1042	glycolysis IV (plant cytosol)
Cp3995_1385	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
Cp3995_1385	PWY-5484	glycolysis II (from fructose 6-phosphate)
Cp3995_1385	PWY-5723	Rubisco shunt
Cp3995_1385	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Cp3995_1385	PWY-6886	1-butanol autotrophic biosynthesis
Cp3995_1385	PWY-6901	superpathway of glucose and xylose degradation
Cp3995_1385	PWY-7003	glycerol degradation to butanol
Cp3995_1385	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
Cp3995_1385	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
Cp3995_1430	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Cp3995_1430	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Cp3995_1432	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
Cp3995_1432	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
Cp3995_1432	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
Cp3995_1432	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
Cp3995_1434	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Cp3995_1434	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Cp3995_1435	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
Cp3995_1435	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
Cp3995_1435	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
Cp3995_1436	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Cp3995_1436	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Cp3995_1446	PWY-2201	folate transformations I
Cp3995_1446	PWY-3841	folate transformations II
Cp3995_1451	PWY-6164	3-dehydroquinate biosynthesis I
Cp3995_1464	PWY-3781	aerobic respiration I (cytochrome c)
Cp3995_1464	PWY-4521	arsenite oxidation I (respiratory)
Cp3995_1464	PWY-6692	Fe(II) oxidation
Cp3995_1464	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Cp3995_1469	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
Cp3995_1469	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
Cp3995_1469	PWY-6269	adenosylcobalamin salvage from cobinamide II
Cp3995_1470	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
Cp3995_1470	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
Cp3995_1470	PWY-6269	adenosylcobalamin salvage from cobinamide II
Cp3995_1471	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
Cp3995_1471	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
Cp3995_1471	PWY-6269	adenosylcobalamin salvage from cobinamide II
Cp3995_1472	PWY-5057	L-valine degradation II
Cp3995_1472	PWY-5076	L-leucine degradation III
Cp3995_1472	PWY-5078	L-isoleucine degradation II
Cp3995_1472	PWY-5101	L-isoleucine biosynthesis II
Cp3995_1472	PWY-5103	L-isoleucine biosynthesis III
Cp3995_1472	PWY-5104	L-isoleucine biosynthesis IV
Cp3995_1472	PWY-5108	L-isoleucine biosynthesis V
Cp3995_1473	PWY-5988	wound-induced proteolysis I
Cp3995_1473	PWY-6018	seed germination protein turnover
Cp3995_1478	PWY-5491	diethylphosphate degradation
Cp3995_1480	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
Cp3995_1480	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
Cp3995_1481	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
Cp3995_1481	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
Cp3995_1481	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
Cp3995_1484	PWY-381	nitrate reduction II (assimilatory)
Cp3995_1484	PWY-5675	nitrate reduction V (assimilatory)
Cp3995_1484	PWY-6549	L-glutamine biosynthesis III
Cp3995_1484	PWY-6963	ammonia assimilation cycle I
Cp3995_1484	PWY-6964	ammonia assimilation cycle II
Cp3995_1513	PWY-7310	D-glucosaminate degradation
Cp3995_1514	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
Cp3995_1514	PWY-6596	adenosine nucleotides degradation I
Cp3995_1514	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
Cp3995_1522	PWY-5874	heme degradation
Cp3995_1522	PWY-5915	phycoerythrobilin biosynthesis I
Cp3995_1522	PWY-5917	phycocyanobilin biosynthesis
Cp3995_1522	PWY-7170	phytochromobilin biosynthesis
Cp3995_1524	PWY-381	nitrate reduction II (assimilatory)
Cp3995_1524	PWY-5675	nitrate reduction V (assimilatory)
Cp3995_1524	PWY-6549	L-glutamine biosynthesis III
Cp3995_1524	PWY-6963	ammonia assimilation cycle I
Cp3995_1524	PWY-6964	ammonia assimilation cycle II
Cp3995_1528	PWY-3821	galactose degradation III
Cp3995_1528	PWY-6317	galactose degradation I (Leloir pathway)
Cp3995_1528	PWY-6527	stachyose degradation
Cp3995_1532	PWY-5663	tetrahydrobiopterin biosynthesis I
Cp3995_1532	PWY-5664	tetrahydrobiopterin biosynthesis II
Cp3995_1532	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
Cp3995_1532	PWY-6703	preQ<sub>0</sub> biosynthesis
Cp3995_1532	PWY-6983	tetrahydrobiopterin biosynthesis III
Cp3995_1532	PWY-7442	drosopterin and aurodrosopterin biosynthesis
Cp3995_1539	PWY-6891	thiazole biosynthesis II (Bacillus)
Cp3995_1539	PWY-6892	thiazole biosynthesis I (E. coli)
Cp3995_1539	PWY-7560	methylerythritol phosphate pathway II
Cp3995_1550	PWY-6749	CMP-legionaminate biosynthesis I
Cp3995_1565	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
Cp3995_1565	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
Cp3995_1576	PWY-5941	glycogen degradation II (eukaryotic)
Cp3995_1576	PWY-6724	starch degradation II
Cp3995_1576	PWY-6737	starch degradation V
Cp3995_1576	PWY-7238	sucrose biosynthesis II
Cp3995_1581	PWY-5123	<i>trans, trans</i>-farnesyl diphosphate biosynthesis
Cp3995_1581	PWY-6174	mevalonate pathway II (archaea)
Cp3995_1581	PWY-6383	mono-<i>trans</i>, poly-<i>cis</i> decaprenyl phosphate biosynthesis
Cp3995_1581	PWY-6859	<i>all-trans</i>-farnesol biosynthesis
Cp3995_1581	PWY-7102	bisabolene biosynthesis
Cp3995_1581	PWY-7391	isoprene biosynthesis II (engineered)
Cp3995_1581	PWY-7524	mevalonate pathway III (archaea)
Cp3995_1581	PWY-7560	methylerythritol phosphate pathway II
Cp3995_1581	PWY-922	mevalonate pathway I
Cp3995_1599	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
Cp3995_1618	PWY-5381	pyridine nucleotide cycling (plants)
Cp3995_1618	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
Cp3995_1630	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
Cp3995_1630	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
Cp3995_1630	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Cp3995_1630	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
Cp3995_1630	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
Cp3995_1630	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
Cp3995_1630	PWY-7205	CMP phosphorylation
Cp3995_1630	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
Cp3995_1630	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Cp3995_1630	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
Cp3995_1630	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Cp3995_1630	PWY-7224	purine deoxyribonucleosides salvage
Cp3995_1630	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
Cp3995_1630	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
Cp3995_1633	PWY-2161	folate polyglutamylation
Cp3995_1635	PWY-1622	formaldehyde assimilation I (serine pathway)
Cp3995_1635	PWY-5392	reductive TCA cycle II
Cp3995_1635	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
Cp3995_1635	PWY-5690	TCA cycle II (plants and fungi)
Cp3995_1635	PWY-5913	TCA cycle VI (obligate autotrophs)
Cp3995_1635	PWY-6728	methylaspartate cycle
Cp3995_1635	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Cp3995_1635	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
Cp3995_1635	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
Cp3995_1638	PWY-5958	acridone alkaloid biosynthesis
Cp3995_1638	PWY-6543	4-aminobenzoate biosynthesis
Cp3995_1638	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
Cp3995_1638	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
Cp3995_1638	PWY-6722	candicidin biosynthesis
Cp3995_1646	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Cp3995_1646	PWY-5723	Rubisco shunt
Cp3995_1650	PWY-4061	glutathione-mediated detoxification I
Cp3995_1650	PWY-6842	glutathione-mediated detoxification II
Cp3995_1650	PWY-7112	4-hydroxy-2-nonenal detoxification
Cp3995_1687	PWY-6012	acyl carrier protein metabolism I
Cp3995_1687	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
Cp3995_1688	PWY-4381	fatty acid biosynthesis initiation I
Cp3995_1688	PWY-5142	acyl-ACP thioesterase pathway
Cp3995_1688	PWY-5147	oleate biosynthesis I (plants)
Cp3995_1688	PWY-5366	palmitoleate biosynthesis II (plants and bacteria)
Cp3995_1688	PWY-5367	petroselinate biosynthesis
Cp3995_1688	PWY-5966	fatty acid biosynthesis initiation II
Cp3995_1688	PWY-5971	palmitate biosynthesis II (bacteria and plants)
Cp3995_1688	PWY-5973	<i>cis</i>-vaccenate biosynthesis
Cp3995_1688	PWY-5989	stearate biosynthesis II (bacteria and plants)
Cp3995_1688	PWY-5994	palmitate biosynthesis I (animals and fungi)
Cp3995_1688	PWY-6113	superpathway of mycolate biosynthesis
Cp3995_1688	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
Cp3995_1688	PWY-6519	8-amino-7-oxononanoate biosynthesis I
Cp3995_1688	PWY-6799	fatty acid biosynthesis (plant mitochondria)
Cp3995_1688	PWY-7096	triclosan resistance
Cp3995_1688	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Cp3995_1688	PWYG-321	mycolate biosynthesis
Cp3995_1698	PWY-7206	pyrimidine deoxyribonucleotides dephosphorylation
Cp3995_1701	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Cp3995_1701	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Cp3995_1705	PWY-5381	pyridine nucleotide cycling (plants)
Cp3995_1713	PWY-3781	aerobic respiration I (cytochrome c)
Cp3995_1713	PWY-4521	arsenite oxidation I (respiratory)
Cp3995_1713	PWY-6692	Fe(II) oxidation
Cp3995_1713	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Cp3995_1715	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
Cp3995_1715	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Cp3995_1715	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
Cp3995_1715	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
Cp3995_1715	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Cp3995_1715	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Cp3995_1715	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
Cp3995_1715	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
Cp3995_1717	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
Cp3995_1717	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Cp3995_1717	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
Cp3995_1717	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
Cp3995_1717	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Cp3995_1717	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Cp3995_1717	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
Cp3995_1717	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
Cp3995_1736	PWY-2723	trehalose degradation V
Cp3995_1736	PWY-3801	sucrose degradation II (sucrose synthase)
Cp3995_1736	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
Cp3995_1736	PWY-5661	GDP-glucose biosynthesis
Cp3995_1736	PWY-5661-1	Cp3995_1736|pgm1|YP_005123838.1|GeneID:11676838
Cp3995_1736	PWY-5940	streptomycin biosynthesis
Cp3995_1736	PWY-5941	glycogen degradation II (eukaryotic)
Cp3995_1736	PWY-622	starch biosynthesis
Cp3995_1736	PWY-6731	starch degradation III
Cp3995_1736	PWY-6737	starch degradation V
Cp3995_1736	PWY-6749	CMP-legionaminate biosynthesis I
Cp3995_1736	PWY-7238	sucrose biosynthesis II
Cp3995_1736	PWY-7343	UDP-glucose biosynthesis
Cp3995_1743	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Cp3995_1743	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Cp3995_1744	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
Cp3995_1744	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
Cp3995_1744	PWY-6268	adenosylcobalamin salvage from cobalamin
Cp3995_1744	PWY-6269	adenosylcobalamin salvage from cobinamide II
Cp3995_1747	PWY-6936	seleno-amino acid biosynthesis
Cp3995_1748	PWY-6936	seleno-amino acid biosynthesis
Cp3995_1748	PWY-7274	D-cycloserine biosynthesis
Cp3995_1750	PWY-6349	CDP-archaeol biosynthesis
Cp3995_1770	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Cp3995_1770	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
Cp3995_1770	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
Cp3995_1771	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Cp3995_1771	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
Cp3995_1771	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
Cp3995_1771	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
Cp3995_1774	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
Cp3995_1774	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Cp3995_1774	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
Cp3995_1774	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
Cp3995_1774	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Cp3995_1774	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Cp3995_1774	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
Cp3995_1774	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
Cp3995_1776	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Cp3995_1776	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
Cp3995_1776	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
Cp3995_1777	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Cp3995_1777	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
Cp3995_1777	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
Cp3995_1778	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Cp3995_1778	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
Cp3995_1778	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
Cp3995_1782	PWY-6123	inosine-5'-phosphate biosynthesis I
Cp3995_1782	PWY-6124	inosine-5'-phosphate biosynthesis II
Cp3995_1782	PWY-7234	inosine-5'-phosphate biosynthesis III
Cp3995_1783	PWY-6123	inosine-5'-phosphate biosynthesis I
Cp3995_1783	PWY-6124	inosine-5'-phosphate biosynthesis II
Cp3995_1783	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Cp3995_1783	PWY-7234	inosine-5'-phosphate biosynthesis III
Cp3995_1786	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Cp3995_1786	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
Cp3995_1786	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
Cp3995_1794	PWY-5691	urate degradation to allantoin I
Cp3995_1794	PWY-7394	urate degradation to allantoin II
Cp3995_1807	PWY-7560	methylerythritol phosphate pathway II
Cp3995_1808	PWY-7560	methylerythritol phosphate pathway II
Cp3995_1816	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
Cp3995_1816	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Cp3995_1816	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
Cp3995_1816	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
Cp3995_1832	PWY-3722	glycine betaine biosynthesis II (Gram-positive bacteria)
Cp3995_1832	PWY-7494	choline degradation IV
Cp3995_1837	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
Cp3995_1837	PWY-6148	tetrahydromethanopterin biosynthesis
Cp3995_1837	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
Cp3995_1837	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
Cp3995_1838	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
Cp3995_1838	PWY-6148	tetrahydromethanopterin biosynthesis
Cp3995_1838	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
Cp3995_1838	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
Cp3995_1839	PWY-6614	tetrahydrofolate biosynthesis
Cp3995_1840	PWY-5663	tetrahydrobiopterin biosynthesis I
Cp3995_1840	PWY-5664	tetrahydrobiopterin biosynthesis II
Cp3995_1840	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
Cp3995_1840	PWY-6703	preQ<sub>0</sub> biosynthesis
Cp3995_1840	PWY-6983	tetrahydrobiopterin biosynthesis III
Cp3995_1840	PWY-7442	drosopterin and aurodrosopterin biosynthesis
Cp3995_1842	PWY-6599	guanine and guanosine salvage II
Cp3995_1842	PWY-6609	adenine and adenosine salvage III
Cp3995_1842	PWY-6610	adenine and adenosine salvage IV
Cp3995_1842	PWY-6620	guanine and guanosine salvage
Cp3995_1844	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
Cp3995_1844	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
Cp3995_1848	PWY-6857	retinol biosynthesis
Cp3995_1870	PWY-6840	homoglutathione biosynthesis
Cp3995_1870	PWY-7255	ergothioneine biosynthesis I (bacteria)
Cp3995_1883	PWY-5482	pyruvate fermentation to acetate II
Cp3995_1883	PWY-5485	pyruvate fermentation to acetate IV
Cp3995_1883	PWY-5497	purine nucleobases degradation II (anaerobic)
Cp3995_1884	PWY-1281	sulfoacetaldehyde degradation I
Cp3995_1884	PWY-5482	pyruvate fermentation to acetate II
Cp3995_1884	PWY-5485	pyruvate fermentation to acetate IV
Cp3995_1884	PWY-5497	purine nucleobases degradation II (anaerobic)
Cp3995_1884	PWY-6637	sulfolactate degradation II
Cp3995_1897	PWY-5674	nitrate reduction IV (dissimilatory)
Cp3995_1899	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Cp3995_1911	PWY-1042	glycolysis IV (plant cytosol)
Cp3995_1911	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Cp3995_1911	PWY-5484	glycolysis II (from fructose 6-phosphate)
Cp3995_1911	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Cp3995_1911	PWY-7385	1,3-propanediol biosynthesis (engineered)
Cp3995_1915	PWY-5686	UMP biosynthesis
Cp3995_1919	PWY-4261	glycerol degradation I
Cp3995_1919	PWY-6118	glycerol-3-phosphate shuttle
Cp3995_1919	PWY-6952	glycerophosphodiester degradation
Cp3995_1973	PWY-5704	urea degradation II
Cp3995_1974	PWY-5704	urea degradation II
Cp3995_1975	PWY-5704	urea degradation II
Cp3995_1984	PWY-7346	UDP-&alpha;-D-glucuronate biosynthesis (from UDP-glucose)
Cp3995_1985	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
Cp3995_1991	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
Cp3995_1997	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
Cp3995_2005	PWY-4381	fatty acid biosynthesis initiation I
Cp3995_2005	PWY-5743	3-hydroxypropanoate cycle
Cp3995_2005	PWY-5744	glyoxylate assimilation
Cp3995_2005	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Cp3995_2005	PWY-6679	jadomycin biosynthesis
Cp3995_2005	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Cp3995_2023	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
Cp3995_2023	PWY-7328	superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
Cp3995_2031	PWY-5667	CDP-diacylglycerol biosynthesis I
Cp3995_2031	PWY-5981	CDP-diacylglycerol biosynthesis III
Cp3995_2031	PWY-7411	superpathway of phosphatidate biosynthesis (yeast)
Cp3995_2031	PWY-7417	phospholipid remodeling (phosphatidate, yeast)
Cp3995_2032	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
Cp3995_2037	PWY-7432	L-phenylalanine biosynthesis III (cytosolic, plants)
Cp3995_2038	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
Cp3995_2048	PWY-6556	pyrimidine ribonucleosides salvage II
Cp3995_2048	PWY-7181	pyrimidine deoxyribonucleosides degradation
Cp3995_2048	PWY-7193	pyrimidine ribonucleosides salvage I
Cp3995_2048	PWY-7199	pyrimidine deoxyribonucleosides salvage
Cp3995_2049	PWY-7181	pyrimidine deoxyribonucleosides degradation
Cp3995_2050	PWY-5481	pyruvate fermentation to lactate
Cp3995_2050	PWY-6901	superpathway of glucose and xylose degradation
Cp3995_2053	PWY-6854	ethylene biosynthesis III (microbes)
Cp3995_2109	PWY-6938	NADH repair
Cp3995_2125	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
Cp3995_2125	PWY-6855	chitin degradation I (archaea)
Cp3995_2125	PWY-6906	chitin derivatives degradation
Cp3995_2126	PWY-6906	chitin derivatives degradation
Cp3995_2126	PWY-7077	<i>N</i>-acetyl-D-galactosamine degradation
Cp3995_2126	PWY-7395	D-galactosamine and <i>N</i>-acetyl-D-galactosamine degradation
Cp3995_2134	PWY-2941	L-lysine biosynthesis II
Cp3995_2134	PWY-2942	L-lysine biosynthesis III
Cp3995_2134	PWY-5097	L-lysine biosynthesis VI
Cp3995_2148	PWY-5958	acridone alkaloid biosynthesis
Cp3995_2148	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
Cp3995_2148	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
Cp3995_2149	PWY-5958	acridone alkaloid biosynthesis
Cp3995_2149	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
Cp3995_2149	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
