CNE_1c00010	SSF48295	TrpR-like
CNE_1c00010	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CNE_1c00020	SSF55979	DNA clamp
CNE_1c00030	SSF54211	Ribosomal protein S5 domain 2-like
CNE_1c00030	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
CNE_1c00030	SSF56719	Type II DNA topoisomerase
CNE_1c00040	SSF53041	Resolvase-like
CNE_1c00050	SSF111364	Tsx-like channel
CNE_1c00070	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CNE_1c00100	SSF46785	"Winged helix" DNA-binding domain
CNE_1c00100	SSF53850	Periplasmic binding protein-like II
CNE_1c00110	SSF46785	"Winged helix" DNA-binding domain
CNE_1c00110	SSF53850	Periplasmic binding protein-like II
CNE_1c00120	SSF51556	Metallo-dependent hydrolases
CNE_1c00130	SSF53474	alpha/beta-Hydrolases
CNE_1c00140	SSF52343	Ferredoxin reductase-like, C-terminal NADP-linked domain
CNE_1c00140	SSF54292	2Fe-2S ferredoxin-like
CNE_1c00140	SSF63380	Riboflavin synthase domain-like
CNE_1c00150	SSF47616	GST C-terminal domain-like
CNE_1c00150	SSF52833	Thioredoxin-like
CNE_1c00160	SSF55961	Bet v1-like
CNE_1c00170	SSF55961	Bet v1-like
CNE_1c00180	SSF50022	ISP domain
CNE_1c00190	SSF50129	GroES-like
CNE_1c00190	SSF51735	NAD(P)-binding Rossmann-fold domains
CNE_1c00230	SSF141868	EAL domain-like
CNE_1c00230	SSF55073	Nucleotide cyclase
CNE_1c00230	SSF55785	PYP-like sensor domain (PAS domain)
CNE_1c00270	SSF103088	OmpA-like
CNE_1c00300	SSF103473	MFS general substrate transporter
CNE_1c00320	SSF51735	NAD(P)-binding Rossmann-fold domains
CNE_1c00330	SSF46785	"Winged helix" DNA-binding domain
CNE_1c00330	SSF48008	GntR ligand-binding domain-like
CNE_1c00350	SSF47413	lambda repressor-like DNA-binding domains
CNE_1c00380	SSF103473	MFS general substrate transporter
CNE_1c00390	SSF47413	lambda repressor-like DNA-binding domains
CNE_1c00410	SSF52768	Arginase/deacetylase
CNE_1c00420	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CNE_1c00430	SSF161098	MetI-like
CNE_1c00440	SSF53850	Periplasmic binding protein-like II
CNE_1c00450	SSF46785	"Winged helix" DNA-binding domain
CNE_1c00450	SSF55781	GAF domain-like
CNE_1c00470	SSF101386	all-alpha NTP pyrophosphatases
CNE_1c00500	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
CNE_1c00510	SSF46955	Putative DNA-binding domain
CNE_1c00520	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
CNE_1c00540	SSF117396	TM1631-like
CNE_1c00550	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CNE_1c00570	SSF46689	Homeodomain-like
CNE_1c00580	SSF54631	CBS-domain pair
CNE_1c00590	SSF50022	ISP domain
CNE_1c00590	SSF55961	Bet v1-like
CNE_1c00600	SSF103473	MFS general substrate transporter
CNE_1c00610	SSF52833	Thioredoxin-like
CNE_1c00620	SSF56281	Metallo-hydrolase/oxidoreductase
CNE_1c00630	SSF47616	GST C-terminal domain-like
CNE_1c00630	SSF52833	Thioredoxin-like
CNE_1c00650	SSF51338	Composite domain of metallo-dependent hydrolases
CNE_1c00650	SSF51556	Metallo-dependent hydrolases
CNE_1c00660	SSF51569	Aldolase
CNE_1c00670	SSF56601	beta-lactamase/transpeptidase-like
CNE_1c00680	SSF103473	MFS general substrate transporter
CNE_1c00690	SSF46785	"Winged helix" DNA-binding domain
CNE_1c00690	SSF48008	GntR ligand-binding domain-like
CNE_1c00700	SSF56529	FAH
CNE_1c00710	SSF53187	Zn-dependent exopeptidases
CNE_1c00710	SSF55031	Bacterial exopeptidase dimerisation domain
CNE_1c00720	SSF46689	Homeodomain-like
CNE_1c00720	SSF51182	RmlC-like cupins
CNE_1c00730	SSF103473	MFS general substrate transporter
CNE_1c00740	SSF46785	"Winged helix" DNA-binding domain
CNE_1c00750	SSF103481	Multidrug resistance efflux transporter EmrE
CNE_1c00770	SSF53850	Periplasmic binding protein-like II
CNE_1c00780	SSF46894	C-terminal effector domain of the bipartite response regulators
CNE_1c00780	SSF52172	CheY-like
CNE_1c00800	SSF56935	Porins
CNE_1c00810	SSF55229	Cell division protein MinE topological specificity domain
CNE_1c00820	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CNE_1c00830	SSF63848	Cell-division inhibitor MinC, C-terminal domain
CNE_1c00840	SSF143865	CorA soluble domain-like
CNE_1c00840	SSF144083	Magnesium transport protein CorA, transmembrane region
CNE_1c00850	SSF81901	HCP-like
CNE_1c00860	SSF46955	Putative DNA-binding domain
CNE_1c00870	SSF46785	"Winged helix" DNA-binding domain
CNE_1c00870	SSF53850	Periplasmic binding protein-like II
CNE_1c00880	SSF53850	Periplasmic binding protein-like II
CNE_1c00890	SSF53187	Zn-dependent exopeptidases
CNE_1c00930	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
CNE_1c00940	SSF116878	TrmE connector domain
CNE_1c00940	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CNE_1c00960	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
CNE_1c00970	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
CNE_1c00980	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
CNE_1c00990	SSF55931	Glutamine synthetase/guanido kinase
CNE_1c00990	SSF89095	GatB/YqeY motif
CNE_1c01000	SSF53474	alpha/beta-Hydrolases
CNE_1c01020	SSF75304	Amidase signature (AS) enzymes
CNE_1c01030	SSF141000	Glu-tRNAGln amidotransferase C subunit
CNE_1c01040	SSF53067	Actin-like ATPase domain
CNE_1c01070	SSF56519	Penicillin binding protein dimerisation domain
CNE_1c01070	SSF56601	beta-lactamase/transpeptidase-like
CNE_1c01100	SSF47823	lambda integrase-like, N-terminal domain
CNE_1c01100	SSF56349	DNA breaking-rejoining enzymes
CNE_1c01110	SSF46785	"Winged helix" DNA-binding domain
CNE_1c01110	SSF53850	Periplasmic binding protein-like II
CNE_1c01130	SSF55681	Class II aaRS and biotin synthetases
CNE_1c01140	SSF102114	Radical SAM enzymes
CNE_1c01150	SSF160467	PH0987 N-terminal domain-like
CNE_1c01150	SSF50891	Cyclophilin-like
CNE_1c01160	SSF50891	Cyclophilin-like
CNE_1c01170	SSF88713	Glycoside hydrolase/deacetylase
CNE_1c01200	SSF53182	Pyrrolidone carboxyl peptidase (pyroglutamate aminopeptidase)
CNE_1c01220	SSF159594	XCC0632-like
CNE_1c01240	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CNE_1c01260	SSF50037	C-terminal domain of transcriptional repressors
CNE_1c01260	SSF55681	Class II aaRS and biotin synthetases
CNE_1c01270	SSF53067	Actin-like ATPase domain
CNE_1c01280	SSF110997	Sporulation related repeat
CNE_1c01290	SSF52374	Nucleotidylyl transferase
CNE_1c01300	SSF47240	Ferritin-like
CNE_1c01310	SSF52151	FabD/lysophospholipase-like
CNE_1c01330	SSF52096	ClpP/crotonase
CNE_1c01340	SSF56529	FAH
CNE_1c01350	SSF53850	Periplasmic binding protein-like II
CNE_1c01360	SSF46785	"Winged helix" DNA-binding domain
CNE_1c01360	SSF55781	GAF domain-like
CNE_1c01380	SSF53474	alpha/beta-Hydrolases
CNE_1c01400	SSF52821	Rhodanese/Cell cycle control phosphatase
CNE_1c01410	SSF82282	Homocysteine S-methyltransferase
CNE_1c01420	SSF47644	Methionine synthase domain
CNE_1c01420	SSF51717	Dihydropteroate synthetase-like
CNE_1c01420	SSF52242	Cobalamin (vitamin B12)-binding domain
CNE_1c01420	SSF56507	Methionine synthase activation domain-like
CNE_1c01440	SSF46894	C-terminal effector domain of the bipartite response regulators
CNE_1c01440	SSF52172	CheY-like
CNE_1c01450	SSF52172	CheY-like
CNE_1c01460	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
CNE_1c01500	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
CNE_1c01500	SSF52374	Nucleotidylyl transferase
CNE_1c01500	SSF55190	Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain
CNE_1c01510	SSF110997	Sporulation related repeat
CNE_1c01520	SSF52833	Thioredoxin-like
CNE_1c01530	SSF51735	NAD(P)-binding Rossmann-fold domains
CNE_1c01540	SSF53807	"Helical backbone" metal receptor
CNE_1c01550	SSF56281	Metallo-hydrolase/oxidoreductase
CNE_1c01560	SSF46955	Putative DNA-binding domain
CNE_1c01570	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
CNE_1c01580	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
CNE_1c01580	SSF56645	Acyl-CoA dehydrogenase NM domain-like
CNE_1c01600	SSF53056	beta-carbonic anhydrase, cab
CNE_1c01610	SSF53901	Thiolase-like
CNE_1c01620	SSF51735	NAD(P)-binding Rossmann-fold domains
CNE_1c01630	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
CNE_1c01630	SSF56645	Acyl-CoA dehydrogenase NM domain-like
CNE_1c01640	SSF52833	Thioredoxin-like
CNE_1c01650	SSF56784	HAD-like
CNE_1c01660	SSF54427	NTF2-like
CNE_1c01670	SSF47616	GST C-terminal domain-like
CNE_1c01670	SSF52833	Thioredoxin-like
CNE_1c01680	SSF52096	ClpP/crotonase
CNE_1c01690	SSF53474	alpha/beta-Hydrolases
CNE_1c01700	SSF52096	ClpP/crotonase
CNE_1c01710	SSF53383	PLP-dependent transferases
CNE_1c01720	SSF53383	PLP-dependent transferases
CNE_1c01730	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CNE_1c01740	SSF102114	Radical SAM enzymes
CNE_1c01750	SSF51230	Single hybrid motif
CNE_1c01750	SSF51246	Rudiment single hybrid motif
CNE_1c01750	SSF52440	PreATP-grasp domain
CNE_1c01750	SSF56059	Glutathione synthetase ATP-binding domain-like
CNE_1c01760	SSF51735	NAD(P)-binding Rossmann-fold domains
CNE_1c01770	SSF51569	Aldolase
CNE_1c01780	SSF55826	YbaK/ProRS associated domain
CNE_1c01790	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
CNE_1c01800	SSF56281	Metallo-hydrolase/oxidoreductase
CNE_1c01810	SSF56935	Porins
CNE_1c01830	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CNE_1c01840	SSF109635	DnaK suppressor protein DksA, alpha-hairpin domain
CNE_1c01840	SSF57716	Glucocorticoid receptor-like (DNA-binding domain)
CNE_1c01850	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CNE_1c01850	SSF90002	Hypothetical protein YjiA, C-terminal domain
CNE_1c01860	SSF46785	"Winged helix" DNA-binding domain
CNE_1c01870	SSF53474	alpha/beta-Hydrolases
CNE_1c01880	SSF53850	Periplasmic binding protein-like II
CNE_1c01890	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
CNE_1c01900	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CNE_1c01920	SSF52172	CheY-like
CNE_1c01930	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
CNE_1c01940	SSF110087	DR1885-like metal-binding protein
CNE_1c01950	SSF46785	"Winged helix" DNA-binding domain
CNE_1c01950	SSF53850	Periplasmic binding protein-like II
CNE_1c01980	SSF53633	Carbamate kinase-like
CNE_1c01990	SSF56784	HAD-like
CNE_1c02000	SSF46689	Homeodomain-like
CNE_1c02000	SSF48498	Tetracyclin repressor-like, C-terminal domain
CNE_1c02010	SSF53474	alpha/beta-Hydrolases
CNE_1c02020	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
CNE_1c02030	SSF46785	"Winged helix" DNA-binding domain
CNE_1c02030	SSF53850	Periplasmic binding protein-like II
CNE_1c02040	SSF103481	Multidrug resistance efflux transporter EmrE
CNE_1c02050	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
CNE_1c02060	SSF103473	MFS general substrate transporter
CNE_1c02080	SSF51735	NAD(P)-binding Rossmann-fold domains
CNE_1c02080	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
CNE_1c02090	SSF56219	DNase I-like
CNE_1c02100	SSF53271	PRTase-like
CNE_1c02110	SSF52151	FabD/lysophospholipase-like
CNE_1c02120	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CNE_1c02130	SSF54506	Diaminopimelate epimerase-like
CNE_1c02160	SSF55973	S-adenosylmethionine synthetase
CNE_1c02180	SSF53720	ALDH-like
CNE_1c02190	SSF51905	FAD/NAD(P)-binding domain
CNE_1c02190	SSF54373	FAD-linked reductases, C-terminal domain
CNE_1c02200	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
CNE_1c02200	SSF56645	Acyl-CoA dehydrogenase NM domain-like
CNE_1c02230	SSF51905	FAD/NAD(P)-binding domain
CNE_1c02240	SSF54285	MoaD/ThiS
CNE_1c02250	SSF110399	ThiG-like
CNE_1c02260	SSF51391	Thiamin phosphate synthase
CNE_1c02270	SSF55729	Acyl-CoA N-acyltransferases (Nat)
CNE_1c02280	SSF47598	Ribbon-helix-helix
CNE_1c02290	SSF143011	RelE-like
CNE_1c02300	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
CNE_1c02320	SSF53613	Ribokinase-like
CNE_1c02330	SSF51735	NAD(P)-binding Rossmann-fold domains
CNE_1c02330	SSF52283	Formate/glycerate dehydrogenase catalytic domain-like
CNE_1c02350	SSF51730	FAD-linked oxidoreductase
CNE_1c02360	SSF159894	YgaC/TfoX-N like
CNE_1c02370	SSF54285	MoaD/ThiS
CNE_1c02380	SSF100950	NagB/RpiA/CoA transferase-like
CNE_1c02390	SSF48435	Bacterial muramidases
CNE_1c02390	SSF53955	Lysozyme-like
CNE_1c02400	SSF51735	NAD(P)-binding Rossmann-fold domains
CNE_1c02410	SSF47616	GST C-terminal domain-like
CNE_1c02410	SSF52833	Thioredoxin-like
CNE_1c02420	SSF81301	Nucleotidyltransferase
CNE_1c02420	SSF81891	Poly A polymerase C-terminal region-like
CNE_1c02430	SSF52402	Adenine nucleotide alpha hydrolases-like
CNE_1c02440	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CNE_1c02450	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CNE_1c02480	SSF53822	Periplasmic binding protein-like I
CNE_1c02490	SSF53850	Periplasmic binding protein-like II
CNE_1c02500	SSF50331	MOP-like
CNE_1c02500	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CNE_1c02510	SSF161098	MetI-like
CNE_1c02520	SSF161098	MetI-like
CNE_1c02540	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
CNE_1c02550	SSF51735	NAD(P)-binding Rossmann-fold domains
CNE_1c02560	SSF55620	Tetrahydrobiopterin biosynthesis enzymes-like
CNE_1c02570	SSF52402	Adenine nucleotide alpha hydrolases-like
CNE_1c02590	SSF51161	Trimeric LpxA-like enzymes
CNE_1c02590	SSF53448	Nucleotide-diphospho-sugar transferases
CNE_1c02600	SSF53697	SIS domain
CNE_1c02600	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
CNE_1c02610	SSF81342	Transmembrane di-heme cytochromes
CNE_1c02620	SSF56524	Oxidoreductase molybdopterin-binding domain
CNE_1c02650	SSF46955	Putative DNA-binding domain
CNE_1c02660	SSF46689	Homeodomain-like
CNE_1c02690	SSF143422	Transposase IS200-like
CNE_1c02700	SSF53098	Ribonuclease H-like
CNE_1c02710	SSF46785	"Winged helix" DNA-binding domain
CNE_1c02710	SSF53850	Periplasmic binding protein-like II
CNE_1c02720	SSF53850	Periplasmic binding protein-like II
CNE_1c02730	SSF47240	Ferritin-like
CNE_1c02750	SSF55729	Acyl-CoA N-acyltransferases (Nat)
CNE_1c02760	SSF161111	Cation efflux protein transmembrane domain-like
CNE_1c02770	SSF46785	"Winged helix" DNA-binding domain
CNE_1c02770	SSF53383	PLP-dependent transferases
CNE_1c02780	SSF53383	PLP-dependent transferases
CNE_1c02790	SSF53720	ALDH-like
CNE_1c02800	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
CNE_1c02810	SSF46689	Homeodomain-like
CNE_1c02830	SSF143422	Transposase IS200-like
CNE_1c02840	SSF46689	Homeodomain-like
CNE_1c02840	SSF52317	Class I glutamine amidotransferase-like
CNE_1c02850	SSF103473	MFS general substrate transporter
CNE_1c02880	SSF46785	"Winged helix" DNA-binding domain
CNE_1c02880	SSF53383	PLP-dependent transferases
CNE_1c02900	SSF51703	Cobalamin (vitamin B12)-dependent enzymes
CNE_1c02900	SSF52242	Cobalamin (vitamin B12)-binding domain
CNE_1c02900	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CNE_1c02910	SSF54197	HIT-like
CNE_1c02920	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
CNE_1c02920	SSF51735	NAD(P)-binding Rossmann-fold domains
CNE_1c02950	SSF46785	"Winged helix" DNA-binding domain
CNE_1c02950	SSF51206	cAMP-binding domain-like
CNE_1c02970	SSF56801	Acetyl-CoA synthetase-like
CNE_1c02980	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CNE_1c03010	SSF53822	Periplasmic binding protein-like I
CNE_1c03020	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CNE_1c03030	SSF56801	Acetyl-CoA synthetase-like
CNE_1c03050	SSF51412	Inosine monophosphate dehydrogenase (IMPDH)
CNE_1c03060	SSF103190	Sensory domain-like
CNE_1c03060	SSF47384	Homodimeric domain of signal transducing histidine kinase
CNE_1c03060	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
CNE_1c03070	SSF46894	C-terminal effector domain of the bipartite response regulators
CNE_1c03070	SSF52172	CheY-like
CNE_1c03080	SSF51905	FAD/NAD(P)-binding domain
CNE_1c03090	SSF46689	Homeodomain-like
CNE_1c03090	SSF52172	CheY-like
CNE_1c03090	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CNE_1c03100	SSF103190	Sensory domain-like
CNE_1c03100	SSF47384	Homodimeric domain of signal transducing histidine kinase
CNE_1c03100	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
CNE_1c03110	SSF118215	Proton glutamate symport protein
CNE_1c03120	SSF52833	Thioredoxin-like
CNE_1c03130	SSF53474	alpha/beta-Hydrolases
CNE_1c03140	SSF56601	beta-lactamase/transpeptidase-like
CNE_1c03140	SSF69189	Penicillin-binding protein associated domain
CNE_1c03150	SSF117991	YbeD/HP0495-like
CNE_1c03160	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
CNE_1c03160	SSF88697	PUA domain-like
CNE_1c03170	SSF53720	ALDH-like
CNE_1c03180	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CNE_1c03190	SSF52833	Thioredoxin-like
CNE_1c03200	SSF52833	Thioredoxin-like
CNE_1c03260	SSF56935	Porins
CNE_1c03270	SSF51338	Composite domain of metallo-dependent hydrolases
CNE_1c03270	SSF51556	Metallo-dependent hydrolases
CNE_1c03280	SSF53697	SIS domain
CNE_1c03290	SSF51735	NAD(P)-binding Rossmann-fold domains
CNE_1c03290	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
CNE_1c03300	SSF53697	SIS domain
CNE_1c03310	SSF53697	SIS domain
CNE_1c03320	SSF53697	SIS domain
CNE_1c03330	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CNE_1c03330	SSF54211	Ribosomal protein S5 domain 2-like
CNE_1c03360	SSF54913	GlnB-like
CNE_1c03370	SSF111352	Ammonium transporter
CNE_1c03390	SSF52440	PreATP-grasp domain
CNE_1c03390	SSF56059	Glutathione synthetase ATP-binding domain-like
CNE_1c03400	SSF53062	PTS system fructose IIA component-like
CNE_1c03410	SSF55594	HPr-like
CNE_1c03420	SSF47831	Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain
CNE_1c03420	SSF51621	Phosphoenolpyruvate/pyruvate domain
CNE_1c03420	SSF52009	Phosphohistidine domain
CNE_1c03440	SSF47240	Ferritin-like
CNE_1c03450	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CNE_1c03450	SSF52821	Rhodanese/Cell cycle control phosphatase
CNE_1c03460	SSF69572	Activating enzymes of the ubiquitin-like proteins
CNE_1c03470	SSF50156	PDZ domain-like
CNE_1c03470	SSF52096	ClpP/crotonase
CNE_1c03480	SSF53254	Phosphoglycerate mutase-like
CNE_1c03490	SSF52821	Rhodanese/Cell cycle control phosphatase
CNE_1c03500	SSF52833	Thioredoxin-like
CNE_1c03510	SSF54611	SecB-like
CNE_1c03520	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
CNE_1c03520	SSF51735	NAD(P)-binding Rossmann-fold domains
CNE_1c03530	SSF53850	Periplasmic binding protein-like II
CNE_1c03540	SSF75217	alpha/beta knot
CNE_1c03550	SSF53271	PRTase-like
CNE_1c03570	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
CNE_1c03590	SSF46626	Cytochrome c
CNE_1c03590	SSF49503	Cupredoxins
CNE_1c03590	SSF81464	Cytochrome c oxidase subunit II-like, transmembrane region
CNE_1c03600	SSF81442	Cytochrome c oxidase subunit I-like
CNE_1c03620	SSF110111	Ctag/Cox11
CNE_1c03640	SSF81452	Cytochrome c oxidase subunit III-like
CNE_1c03670	SSF52833	Thioredoxin-like
CNE_1c03700	SSF52833	Thioredoxin-like
CNE_1c03710	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
CNE_1c03710	SSF88946	Sigma2 domain of RNA polymerase sigma factors
CNE_1c03720	SSF51182	RmlC-like cupins
CNE_1c03730	SSF47648	Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain
CNE_1c03730	SSF52418	Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain
CNE_1c03740	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CNE_1c03750	SSF161098	MetI-like
CNE_1c03760	SSF53850	Periplasmic binding protein-like II
CNE_1c03770	SSF52172	CheY-like
CNE_1c03780	SSF56529	FAH
CNE_1c03790	SSF47616	GST C-terminal domain-like
CNE_1c03790	SSF52833	Thioredoxin-like
CNE_1c03800	SSF47364	Domain of the SRP/SRP receptor G-proteins
CNE_1c03800	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CNE_1c03810	SSF63411	LuxS/MPP-like metallohydrolase
CNE_1c03820	SSF63411	LuxS/MPP-like metallohydrolase
CNE_1c03830	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
CNE_1c03840	SSF52374	Nucleotidylyl transferase
CNE_1c03850	SSF54862	4Fe-4S ferredoxins
CNE_1c03860	SSF101898	NHL repeat
CNE_1c03870	SSF53178	Peptidyl-tRNA hydrolase-like
CNE_1c03880	SSF50715	Ribosomal protein L25-like
CNE_1c03890	SSF53271	PRTase-like
CNE_1c03910	SSF54211	Ribosomal protein S5 domain 2-like
CNE_1c03910	SSF55060	GHMP Kinase, C-terminal domain
CNE_1c03920	SSF89392	Prokaryotic lipoproteins and lipoprotein localization factors
CNE_1c03930	SSF48452	TPR-like
CNE_1c03940	SSF46946	S13-like H2TH domain
CNE_1c03940	SSF57716	Glucocorticoid receptor-like (DNA-binding domain)
CNE_1c03940	SSF81624	N-terminal domain of MutM-like DNA repair proteins
CNE_1c03950	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CNE_1c03960	SSF48150	DNA-glycosylase
CNE_1c03960	SSF55811	Nudix
CNE_1c03970	SSF88697	PUA domain-like
CNE_1c03980	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CNE_1c04000	SSF53795	PEP carboxykinase-like
CNE_1c04000	SSF75138	HprK N-terminal domain-like
CNE_1c04010	SSF55804	Phoshotransferase/anion transport protein
CNE_1c04020	SSF69754	Ribosome binding protein Y (YfiA homologue)
CNE_1c04040	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CNE_1c04070	SSF53697	SIS domain
CNE_1c04080	SSF116726	TrkA C-terminal domain-like
CNE_1c04080	SSF51735	NAD(P)-binding Rossmann-fold domains
CNE_1c04100	SSF52317	Class I glutamine amidotransferase-like
CNE_1c04110	SSF53271	PRTase-like
CNE_1c04130	SSF109755	PhoU-like
CNE_1c04140	SSF103165	Ta1353-like
CNE_1c04150	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CNE_1c04160	SSF103473	MFS general substrate transporter
CNE_1c04170	SSF50249	Nucleic acid-binding proteins
CNE_1c04180	SSF56349	DNA breaking-rejoining enzymes
CNE_1c04190	SSF56349	DNA breaking-rejoining enzymes
CNE_1c04200	SSF56349	DNA breaking-rejoining enzymes
CNE_1c04220	SSF56935	Porins
CNE_1c04230	SSF53850	Periplasmic binding protein-like II
CNE_1c04240	SSF53822	Periplasmic binding protein-like I
CNE_1c04250	SSF55073	Nucleotide cyclase
CNE_1c04290	SSF81324	Voltage-gated potassium channels
CNE_1c04320	SSF53850	Periplasmic binding protein-like II
CNE_1c04330	SSF46689	Homeodomain-like
CNE_1c04330	SSF53697	SIS domain
CNE_1c04340	SSF54523	Pili subunits
CNE_1c04350	SSF54523	Pili subunits
CNE_1c04400	SSF56954	Outer membrane efflux proteins (OEP)
CNE_1c04420	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CNE_1c04430	SSF111369	HlyD-like secretion proteins
CNE_1c04440	SSF46689	Homeodomain-like
CNE_1c04440	SSF48498	Tetracyclin repressor-like, C-terminal domain
CNE_1c04460	SSF55620	Tetrahydrobiopterin biosynthesis enzymes-like
CNE_1c04470	SSF53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes
CNE_1c04470	SSF55021	ACT-like
CNE_1c04490	SSF56784	HAD-like
CNE_1c04500	SSF48208	Six-hairpin glycosidases
CNE_1c04510	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
CNE_1c04520	SSF55248	PCD-like
CNE_1c04530	SSF53448	Nucleotide-diphospho-sugar transferases
CNE_1c04540	SSF51735	NAD(P)-binding Rossmann-fold domains
CNE_1c04550	SSF55961	Bet v1-like
CNE_1c04560	SSF53300	vWA-like
CNE_1c04570	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CNE_1c04580	SSF55447	CO dehydrogenase flavoprotein C-terminal domain-like
CNE_1c04580	SSF56176	FAD-binding/transporter-associated domain-like
CNE_1c04590	SSF54665	CO dehydrogenase molybdoprotein N-domain-like
CNE_1c04590	SSF56003	Molybdenum cofactor-binding domain
CNE_1c04600	SSF47741	CO dehydrogenase ISP C-domain like
CNE_1c04600	SSF54292	2Fe-2S ferredoxin-like
CNE_1c04620	SSF46548	alpha-helical ferredoxin
CNE_1c04620	SSF55103	FAD-linked oxidases, C-terminal domain
CNE_1c04620	SSF56176	FAD-binding/transporter-associated domain-like
CNE_1c04630	SSF54197	HIT-like
CNE_1c04640	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CNE_1c04640	SSF90123	ABC transporter transmembrane region
CNE_1c04660	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
CNE_1c04670	SSF54427	NTF2-like
CNE_1c04690	SSF56112	Protein kinase-like (PK-like)
CNE_1c04700	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
CNE_1c04740	SSF50249	Nucleic acid-binding proteins
CNE_1c04740	SSF55261	GAD domain-like
CNE_1c04740	SSF55681	Class II aaRS and biotin synthetases
CNE_1c04760	SSF55811	Nudix
CNE_1c04770	SSF56219	DNase I-like
CNE_1c04780	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CNE_1c04790	SSF56024	Phospholipase D/nuclease
CNE_1c04810	SSF46689	Homeodomain-like
CNE_1c04810	SSF48498	Tetracyclin repressor-like, C-terminal domain
CNE_1c04820	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
CNE_1c04820	SSF56645	Acyl-CoA dehydrogenase NM domain-like
CNE_1c04830	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
CNE_1c04830	SSF51735	NAD(P)-binding Rossmann-fold domains
CNE_1c04830	SSF52096	ClpP/crotonase
CNE_1c04840	SSF53901	Thiolase-like
CNE_1c04850	SSF82549	DAK1/DegV-like
CNE_1c04860	SSF52096	ClpP/crotonase
CNE_1c04870	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
CNE_1c04880	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CNE_1c04880	SSF90123	ABC transporter transmembrane region
CNE_1c04890	SSF53850	Periplasmic binding protein-like II
CNE_1c04900	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CNE_1c04910	SSF161098	MetI-like
CNE_1c04920	SSF46785	"Winged helix" DNA-binding domain
CNE_1c04920	SSF53850	Periplasmic binding protein-like II
CNE_1c04930	SSF51735	NAD(P)-binding Rossmann-fold domains
CNE_1c04930	SSF53223	Aminoacid dehydrogenase-like, N-terminal domain
CNE_1c04940	SSF53850	Periplasmic binding protein-like II
CNE_1c04950	SSF161098	MetI-like
CNE_1c04960	SSF161098	MetI-like
CNE_1c04970	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CNE_1c04980	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
CNE_1c04990	SSF53659	Isocitrate/Isopropylmalate dehydrogenase-like
CNE_1c05000	SSF82544	GckA/TtuD-like
CNE_1c05010	SSF51556	Metallo-dependent hydrolases
CNE_1c05030	SSF82784	OsmC-like
CNE_1c05040	SSF52161	Ribosomal protein L13
CNE_1c05050	SSF54211	Ribosomal protein S5 domain 2-like
CNE_1c05070	SSF89360	HesB-like domain
CNE_1c05080	SSF51197	Clavaminate synthase-like
CNE_1c05090	SSF46785	"Winged helix" DNA-binding domain
CNE_1c05090	SSF53850	Periplasmic binding protein-like II
CNE_1c05100	SSF53067	Actin-like ATPase domain
CNE_1c05110	SSF51261	Duplicated hybrid motif
CNE_1c05120	SSF52374	Nucleotidylyl transferase
CNE_1c05120	SSF55174	Alpha-L RNA-binding motif
CNE_1c05130	SSF69500	DTD-like
CNE_1c05140	SSF49777	PEBP-like
CNE_1c05150	SSF53254	Phosphoglycerate mutase-like
CNE_1c05190	SSF46785	"Winged helix" DNA-binding domain
CNE_1c05190	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CNE_1c05200	SSF46929	DNA helicase RuvA subunit, C-terminal domain
CNE_1c05200	SSF47781	RuvA domain 2-like
CNE_1c05200	SSF50249	Nucleic acid-binding proteins
CNE_1c05210	SSF51695	PLC-like phosphodiesterases
CNE_1c05220	SSF53098	Ribonuclease H-like
CNE_1c05230	SSF52335	Methylglyoxal synthase-like
CNE_1c05230	SSF53927	Cytidine deaminase-like
CNE_1c05240	SSF46689	Homeodomain-like
CNE_1c05250	SSF51395	FMN-linked oxidoreductases
CNE_1c05260	SSF51905	FAD/NAD(P)-binding domain
CNE_1c05280	SSF53092	Creatinase/prolidase N-terminal domain
CNE_1c05280	SSF55920	Creatinase/aminopeptidase
CNE_1c05290	SSF53448	Nucleotide-diphospho-sugar transferases
CNE_1c05320	SSF56112	Protein kinase-like (PK-like)
CNE_1c05340	SSF109998	Triger factor/SurA peptide-binding domain-like
CNE_1c05340	SSF54534	FKBP-like
CNE_1c05350	SSF53659	Isocitrate/Isopropylmalate dehydrogenase-like
CNE_1c05360	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
CNE_1c05370	SSF52374	Nucleotidylyl transferase
CNE_1c05380	SSF103481	Multidrug resistance efflux transporter EmrE
CNE_1c05390	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
CNE_1c05410	SSF69593	Glycerol-3-phosphate (1)-acyltransferase
CNE_1c05420	SSF56784	HAD-like
CNE_1c05430	SSF109604	HD-domain/PDEase-like
CNE_1c05450	SSF55681	Class II aaRS and biotin synthetases
CNE_1c05460	SSF56317	Carbon-nitrogen hydrolase
CNE_1c05470	SSF54631	CBS-domain pair
CNE_1c05470	SSF56176	FAD-binding/transporter-associated domain-like
CNE_1c05480	SSF55486	Metalloproteases ("zincins"), catalytic domain
CNE_1c05490	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CNE_1c05500	SSF102114	Radical SAM enzymes
CNE_1c05520	SSF54631	CBS-domain pair
CNE_1c05520	SSF81340	Clc chloride channel
CNE_1c05530	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CNE_1c05540	SSF56112	Protein kinase-like (PK-like)
CNE_1c05550	SSF52402	Adenine nucleotide alpha hydrolases-like
CNE_1c05560	SSF89796	CoA-transferase family III (CaiB/BaiF)
CNE_1c05570	SSF69118	AhpD-like
CNE_1c05580	SSF46894	C-terminal effector domain of the bipartite response regulators
CNE_1c05580	SSF52172	CheY-like
CNE_1c05590	SSF141523	L,D-transpeptidase catalytic domain-like
CNE_1c05590	SSF47090	PGBD-like
CNE_1c05600	SSF55166	Hedgehog/DD-peptidase
CNE_1c05620	SSF103473	MFS general substrate transporter
CNE_1c05640	SSF47384	Homodimeric domain of signal transducing histidine kinase
CNE_1c05640	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
CNE_1c05650	SSF52172	CheY-like
CNE_1c05660	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CNE_1c05660	SSF54752	RecA protein, C-terminal domain
CNE_1c05690	SSF52210	Succinyl-CoA synthetase domains
CNE_1c05690	SSF56059	Glutathione synthetase ATP-binding domain-like
CNE_1c05700	SSF51735	NAD(P)-binding Rossmann-fold domains
CNE_1c05700	SSF52210	Succinyl-CoA synthetase domains
CNE_1c05720	SSF54523	Pili subunits
CNE_1c05760	SSF55040	Molybdenum cofactor biosynthesis protein C, MoaC
CNE_1c05770	SSF48452	TPR-like
CNE_1c05780	SSF46689	Homeodomain-like
CNE_1c05790	SSF56601	beta-lactamase/transpeptidase-like
CNE_1c05830	SSF53474	alpha/beta-Hydrolases
CNE_1c05840	SSF54427	NTF2-like
CNE_1c05850	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
CNE_1c05870	SSF56752	D-aminoacid aminotransferase-like PLP-dependent enzymes
CNE_1c05880	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CNE_1c05890	SSF53850	Periplasmic binding protein-like II
CNE_1c05900	SSF46894	C-terminal effector domain of the bipartite response regulators
CNE_1c05910	SSF46894	C-terminal effector domain of the bipartite response regulators
CNE_1c05930	SSF53748	Phosphoglycerate kinase
CNE_1c05940	SSF50800	PK beta-barrel domain-like
CNE_1c05940	SSF51621	Phosphoenolpyruvate/pyruvate domain
CNE_1c05940	SSF52935	PK C-terminal domain-like
CNE_1c05950	SSF51569	Aldolase
CNE_1c05960	SSF56104	SAICAR synthase-like
CNE_1c05970	SSF52255	N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE)
CNE_1c05980	SSF51246	Rudiment single hybrid motif
CNE_1c05980	SSF52440	PreATP-grasp domain
CNE_1c05980	SSF56059	Glutathione synthetase ATP-binding domain-like
CNE_1c05990	SSF55821	YrdC/RibB
CNE_1c06020	SSF56601	beta-lactamase/transpeptidase-like
CNE_1c06030	SSF46785	"Winged helix" DNA-binding domain
CNE_1c06040	SSF53822	Periplasmic binding protein-like I
CNE_1c06050	SSF51905	FAD/NAD(P)-binding domain
CNE_1c06050	SSF54373	FAD-linked reductases, C-terminal domain
CNE_1c06070	SSF46785	"Winged helix" DNA-binding domain
CNE_1c06070	SSF53850	Periplasmic binding protein-like II
CNE_1c06080	SSF56954	Outer membrane efflux proteins (OEP)
CNE_1c06090	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
CNE_1c06090	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
CNE_1c06090	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
CNE_1c06100	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
CNE_1c06100	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
CNE_1c06100	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
CNE_1c06110	SSF111369	HlyD-like secretion proteins
CNE_1c06120	SSF46894	C-terminal effector domain of the bipartite response regulators
CNE_1c06120	SSF52172	CheY-like
CNE_1c06130	SSF47384	Homodimeric domain of signal transducing histidine kinase
CNE_1c06130	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
CNE_1c06150	SSF55826	YbaK/ProRS associated domain
CNE_1c06160	SSF47823	lambda integrase-like, N-terminal domain
CNE_1c06160	SSF56349	DNA breaking-rejoining enzymes
CNE_1c06170	SSF46767	Methylated DNA-protein cysteine methyltransferase, C-terminal domain
CNE_1c06170	SSF53155	Methylated DNA-protein cysteine methyltransferase domain
CNE_1c06180	SSF53850	Periplasmic binding protein-like II
CNE_1c06190	SSF54626	Chalcone isomerase
CNE_1c06210	SSF46548	alpha-helical ferredoxin
CNE_1c06220	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CNE_1c06230	SSF53187	Zn-dependent exopeptidases
CNE_1c06250	SSF46785	"Winged helix" DNA-binding domain
CNE_1c06250	SSF53850	Periplasmic binding protein-like II
CNE_1c06270	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
CNE_1c06280	SSF47413	lambda repressor-like DNA-binding domains
CNE_1c06290	SSF51735	NAD(P)-binding Rossmann-fold domains
CNE_1c06300	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CNE_1c06310	SSF53448	Nucleotide-diphospho-sugar transferases
CNE_1c06320	SSF158997	Trm112p-like
CNE_1c06330	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CNE_1c06380	SSF46609	Fe,Mn superoxide dismutase (SOD), N-terminal domain
CNE_1c06380	SSF54719	Fe,Mn superoxide dismutase (SOD), C-terminal domain
CNE_1c06400	SSF55729	Acyl-CoA N-acyltransferases (Nat)
CNE_1c06410	SSF53850	Periplasmic binding protein-like II
CNE_1c06420	SSF55469	FMN-dependent nitroreductase-like
CNE_1c06440	SSF143422	Transposase IS200-like
CNE_1c06450	SSF54862	4Fe-4S ferredoxins
CNE_1c06460	SSF46785	"Winged helix" DNA-binding domain
CNE_1c06460	SSF53850	Periplasmic binding protein-like II
CNE_1c06470	SSF52833	Thioredoxin-like
CNE_1c06480	SSF140490	Nqo1C-terminal domain-like
CNE_1c06480	SSF142019	Nqo1 FMN-binding domain-like
CNE_1c06480	SSF142984	Nqo1 middle domain-like
CNE_1c06480	SSF52833	Thioredoxin-like
CNE_1c06490	SSF50692	ADC-like
CNE_1c06490	SSF53706	Formate dehydrogenase/DMSO reductase, domains 1-3
CNE_1c06490	SSF54292	2Fe-2S ferredoxin-like
CNE_1c06490	SSF54862	4Fe-4S ferredoxins
CNE_1c06500	SSF53927	Cytidine deaminase-like
CNE_1c06520	SSF53955	Lysozyme-like
CNE_1c06530	SSF89733	L-sulfolactate dehydrogenase-like
CNE_1c06560	SSF52799	(Phosphotyrosine protein) phosphatases II
CNE_1c06570	SSF53067	Actin-like ATPase domain
CNE_1c06580	SSF53659	Isocitrate/Isopropylmalate dehydrogenase-like
CNE_1c06590	SSF53474	alpha/beta-Hydrolases
CNE_1c06600	SSF51735	NAD(P)-binding Rossmann-fold domains
CNE_1c06610	SSF46785	"Winged helix" DNA-binding domain
CNE_1c06610	SSF50331	MOP-like
CNE_1c06630	SSF55154	CYTH-like phosphatases
CNE_1c06640	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CNE_1c06650	SSF161098	MetI-like
CNE_1c06660	SSF53850	Periplasmic binding protein-like II
CNE_1c06680	SSF51735	NAD(P)-binding Rossmann-fold domains
CNE_1c06680	SSF52283	Formate/glycerate dehydrogenase catalytic domain-like
CNE_1c06690	SSF52309	N-(deoxy)ribosyltransferase-like
CNE_1c06710	SSF159594	XCC0632-like
CNE_1c06760	SSF54631	CBS-domain pair
CNE_1c06770	SSF54631	CBS-domain pair
CNE_1c06770	SSF81340	Clc chloride channel
CNE_1c06780	SSF46785	"Winged helix" DNA-binding domain
CNE_1c06780	SSF54909	Dimeric alpha+beta barrel
CNE_1c06790	SSF55909	Pentein
CNE_1c06810	SSF51735	NAD(P)-binding Rossmann-fold domains
CNE_1c06820	SSF46955	Putative DNA-binding domain
CNE_1c06840	SSF46689	Homeodomain-like
CNE_1c06840	SSF52172	CheY-like
CNE_1c06840	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CNE_1c06850	SSF103190	Sensory domain-like
CNE_1c06850	SSF47384	Homodimeric domain of signal transducing histidine kinase
CNE_1c06850	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
CNE_1c06860	SSF118215	Proton glutamate symport protein
CNE_1c06870	SSF103473	MFS general substrate transporter
CNE_1c06880	SSF111326	Urocanase
CNE_1c06890	SSF46785	"Winged helix" DNA-binding domain
CNE_1c06890	SSF64288	Chorismate lyase-like
CNE_1c06900	SSF141868	EAL domain-like
CNE_1c06900	SSF55073	Nucleotide cyclase
CNE_1c06900	SSF55785	PYP-like sensor domain (PAS domain)
CNE_1c06910	SSF55729	Acyl-CoA N-acyltransferases (Nat)
CNE_1c06920	SSF54427	NTF2-like
CNE_1c06930	SSF46626	Cytochrome c
CNE_1c06950	SSF47741	CO dehydrogenase ISP C-domain like
CNE_1c06950	SSF54292	2Fe-2S ferredoxin-like
CNE_1c06960	SSF56003	Molybdenum cofactor-binding domain
CNE_1c06980	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
CNE_1c06980	SSF88946	Sigma2 domain of RNA polymerase sigma factors
CNE_1c06990	SSF56300	Metallo-dependent phosphatases
CNE_1c07000	SSF49503	Cupredoxins
CNE_1c07010	SSF46785	"Winged helix" DNA-binding domain
CNE_1c07020	SSF53850	Periplasmic binding protein-like II
CNE_1c07020	SSF53955	Lysozyme-like
CNE_1c07050	SSF52091	SpoIIaa-like
CNE_1c07060	SSF50129	GroES-like
CNE_1c07070	SSF48592	GroEL equatorial domain-like
CNE_1c07070	SSF52029	GroEL apical domain-like
CNE_1c07070	SSF54849	GroEL-intermediate domain like
CNE_1c07080	SSF56300	Metallo-dependent phosphatases
CNE_1c07110	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CNE_1c07120	SSF52172	CheY-like
CNE_1c07120	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CNE_1c07190	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CNE_1c07270	SSF53448	Nucleotide-diphospho-sugar transferases
CNE_1c07290	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
CNE_1c07300	SSF46689	Homeodomain-like
CNE_1c07300	SSF52172	CheY-like
CNE_1c07300	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CNE_1c07330	SSF46785	"Winged helix" DNA-binding domain
CNE_1c07330	SSF53850	Periplasmic binding protein-like II
CNE_1c07340	SSF103473	MFS general substrate transporter
CNE_1c07390	SSF140478	LemA-like
CNE_1c07400	SSF53383	PLP-dependent transferases
CNE_1c07410	SSF57802	Rubredoxin-like
CNE_1c07420	SSF52172	CheY-like
CNE_1c07430	SSF52172	CheY-like
CNE_1c07440	SSF50341	CheW-like
CNE_1c07450	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
CNE_1c07460	SSF47226	Histidine-containing phosphotransfer domain, HPT domain
CNE_1c07460	SSF50341	CheW-like
CNE_1c07460	SSF52172	CheY-like
CNE_1c07460	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
CNE_1c07480	SSF103473	MFS general substrate transporter
CNE_1c07490	SSF51735	NAD(P)-binding Rossmann-fold domains
CNE_1c07510	SSF53720	ALDH-like
CNE_1c07520	SSF50324	Inorganic pyrophosphatase
CNE_1c07530	SSF81342	Transmembrane di-heme cytochromes
CNE_1c07540	SSF55729	Acyl-CoA N-acyltransferases (Nat)
CNE_1c07550	SSF52402	Adenine nucleotide alpha hydrolases-like
CNE_1c07550	SSF56317	Carbon-nitrogen hydrolase
CNE_1c07560	SSF103481	Multidrug resistance efflux transporter EmrE
CNE_1c07590	SSF46689	Homeodomain-like
CNE_1c07590	SSF52317	Class I glutamine amidotransferase-like
CNE_1c07600	SSF54913	GlnB-like
CNE_1c07620	SSF160443	SMR domain-like
CNE_1c07630	SSF51905	FAD/NAD(P)-binding domain
CNE_1c07640	SSF46785	"Winged helix" DNA-binding domain
CNE_1c07640	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CNE_1c07650	SSF89392	Prokaryotic lipoproteins and lipoprotein localization factors
CNE_1c07670	SSF50129	GroES-like
CNE_1c07670	SSF51735	NAD(P)-binding Rossmann-fold domains
CNE_1c07690	SSF53850	Periplasmic binding protein-like II
CNE_1c07700	SSF48371	ARM repeat
CNE_1c07710	SSF161098	MetI-like
CNE_1c07720	SSF50331	MOP-like
CNE_1c07720	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CNE_1c07730	SSF48019	post-AAA+ oligomerization domain-like
CNE_1c07730	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CNE_1c07740	SSF46589	tRNA-binding arm
CNE_1c07740	SSF55681	Class II aaRS and biotin synthetases
CNE_1c07760	SSF109604	HD-domain/PDEase-like
CNE_1c07770	SSF48317	Acid phosphatase/Vanadium-dependent haloperoxidase
CNE_1c07780	SSF54631	CBS-domain pair
CNE_1c07780	SSF56176	FAD-binding/transporter-associated domain-like
CNE_1c07790	SSF46785	"Winged helix" DNA-binding domain
CNE_1c07790	SSF53850	Periplasmic binding protein-like II
CNE_1c07800	SSF51905	FAD/NAD(P)-binding domain
CNE_1c07800	SSF54373	FAD-linked reductases, C-terminal domain
CNE_1c07810	SSF53850	Periplasmic binding protein-like II
CNE_1c07830	SSF53850	Periplasmic binding protein-like II
CNE_1c07840	SSF161098	MetI-like
CNE_1c07850	SSF53244	MurD-like peptide ligases, peptide-binding domain
CNE_1c07850	SSF53623	MurD-like peptide ligases, catalytic domain
CNE_1c07850	SSF56059	Glutathione synthetase ATP-binding domain-like
CNE_1c07860	SSF53244	MurD-like peptide ligases, peptide-binding domain
CNE_1c07860	SSF53623	MurD-like peptide ligases, catalytic domain
CNE_1c07860	SSF56059	Glutathione synthetase ATP-binding domain-like
CNE_1c07870	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CNE_1c07870	SSF90123	ABC transporter transmembrane region
CNE_1c07900	SSF49401	Bacterial adhesins
CNE_1c07920	SSF55785	PYP-like sensor domain (PAS domain)
CNE_1c07920	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
CNE_1c07930	SSF46894	C-terminal effector domain of the bipartite response regulators
CNE_1c07930	SSF52172	CheY-like
CNE_1c07940	SSF51338	Composite domain of metallo-dependent hydrolases
CNE_1c07940	SSF51556	Metallo-dependent hydrolases
CNE_1c07960	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
CNE_1c07980	SSF56784	HAD-like
CNE_1c07990	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
CNE_1c08000	SSF103088	OmpA-like
CNE_1c08010	SSF101904	GyrA/ParC C-terminal domain-like
CNE_1c08010	SSF56719	Type II DNA topoisomerase
CNE_1c08030	SSF53383	PLP-dependent transferases
CNE_1c08040	SSF48600	Chorismate mutase II
CNE_1c08040	SSF53850	Periplasmic binding protein-like II
CNE_1c08040	SSF55021	ACT-like
CNE_1c08050	SSF53383	PLP-dependent transferases
CNE_1c08060	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
CNE_1c08060	SSF51735	NAD(P)-binding Rossmann-fold domains
CNE_1c08070	SSF55205	EPT/RTPC-like
CNE_1c08090	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CNE_1c08110	SSF50249	Nucleic acid-binding proteins
CNE_1c08120	SSF47729	IHF-like DNA-binding proteins
CNE_1c08140	SSF48452	TPR-like
CNE_1c08150	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
CNE_1c08150	SSF51735	NAD(P)-binding Rossmann-fold domains
CNE_1c08150	SSF52413	UDP-glucose/GDP-mannose dehydrogenase C-terminal domain
CNE_1c08160	SSF53613	Ribokinase-like
CNE_1c08170	SSF51735	NAD(P)-binding Rossmann-fold domains
CNE_1c08180	SSF47781	RuvA domain 2-like
CNE_1c08200	SSF53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes
CNE_1c08210	SSF53955	Lysozyme-like
CNE_1c08220	SSF52768	Arginase/deacetylase
CNE_1c08230	SSF52096	ClpP/crotonase
CNE_1c08240	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CNE_1c08240	SSF55021	ACT-like
CNE_1c08250	SSF161098	MetI-like
CNE_1c08260	SSF53850	Periplasmic binding protein-like II
CNE_1c08270	SSF52402	Adenine nucleotide alpha hydrolases-like
CNE_1c08280	SSF52402	Adenine nucleotide alpha hydrolases-like
CNE_1c08280	SSF52467	DHS-like NAD/FAD-binding domain
CNE_1c08290	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
CNE_1c08290	SSF56645	Acyl-CoA dehydrogenase NM domain-like
CNE_1c08300	SSF51905	FAD/NAD(P)-binding domain
CNE_1c08300	SSF54373	FAD-linked reductases, C-terminal domain
CNE_1c08310	SSF46785	"Winged helix" DNA-binding domain
CNE_1c08310	SSF54909	Dimeric alpha+beta barrel
CNE_1c08330	SSF53098	Ribonuclease H-like
CNE_1c08340	SSF46689	Homeodomain-like
CNE_1c08350	SSF102114	Radical SAM enzymes
CNE_1c08360	SSF46785	"Winged helix" DNA-binding domain
CNE_1c08360	SSF53850	Periplasmic binding protein-like II
CNE_1c08400	SSF50952	Soluble quinoprotein glucose dehydrogenase
CNE_1c08420	SSF54565	Ribosomal protein S16
CNE_1c08430	SSF50346	PRC-barrel domain
CNE_1c08430	SSF50447	Translation proteins
CNE_1c08440	SSF75217	alpha/beta knot
CNE_1c08450	SSF50104	Translation proteins SH3-like domain
CNE_1c08460	SSF55811	Nudix
CNE_1c08470	SSF52821	Rhodanese/Cell cycle control phosphatase
CNE_1c08480	SSF89550	PHP domain-like
CNE_1c08490	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
CNE_1c08500	SSF53448	Nucleotide-diphospho-sugar transferases
CNE_1c08520	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CNE_1c08520	SSF90123	ABC transporter transmembrane region
CNE_1c08530	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
CNE_1c08540	SSF69118	AhpD-like
CNE_1c08570	SSF50249	Nucleic acid-binding proteins
CNE_1c08580	SSF52972	ITPase-like
CNE_1c08590	SSF75217	alpha/beta knot
CNE_1c08600	SSF81301	Nucleotidyltransferase
CNE_1c08610	SSF52374	Nucleotidylyl transferase
CNE_1c08620	SSF102886	Coproporphyrinogen III oxidase
CNE_1c08630	SSF51246	Rudiment single hybrid motif
CNE_1c08630	SSF52440	PreATP-grasp domain
CNE_1c08630	SSF56059	Glutathione synthetase ATP-binding domain-like
CNE_1c08640	SSF75625	YebC-like
CNE_1c08650	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CNE_1c08660	SSF53098	Ribonuclease H-like
CNE_1c08680	SSF53271	PRTase-like
CNE_1c08690	SSF103473	MFS general substrate transporter
CNE_1c08700	SSF46626	Cytochrome c
CNE_1c08700	SSF56003	Molybdenum cofactor-binding domain
CNE_1c08710	SSF47741	CO dehydrogenase ISP C-domain like
CNE_1c08710	SSF54292	2Fe-2S ferredoxin-like
CNE_1c08720	SSF51905	FAD/NAD(P)-binding domain
CNE_1c08720	SSF54373	FAD-linked reductases, C-terminal domain
CNE_1c08740	SSF53474	alpha/beta-Hydrolases
CNE_1c08750	SSF144052	Thermophilic metalloprotease-like
CNE_1c08760	SSF52499	Isochorismatase-like hydrolases
CNE_1c08770	SSF46689	Homeodomain-like
CNE_1c08770	SSF48498	Tetracyclin repressor-like, C-terminal domain
CNE_1c08780	SSF54665	CO dehydrogenase molybdoprotein N-domain-like
CNE_1c08780	SSF56003	Molybdenum cofactor-binding domain
CNE_1c08790	SSF46785	"Winged helix" DNA-binding domain
CNE_1c08800	SSF103481	Multidrug resistance efflux transporter EmrE
CNE_1c08810	SSF51735	NAD(P)-binding Rossmann-fold domains
CNE_1c08820	SSF52335	Methylglyoxal synthase-like
CNE_1c08830	SSF50129	GroES-like
CNE_1c08830	SSF51735	NAD(P)-binding Rossmann-fold domains
CNE_1c08850	SSF53822	Periplasmic binding protein-like I
CNE_1c08880	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CNE_1c08890	SSF51182	RmlC-like cupins
CNE_1c08900	SSF161098	MetI-like
CNE_1c08910	SSF53850	Periplasmic binding protein-like II
CNE_1c08920	SSF161098	MetI-like
CNE_1c08930	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CNE_1c08930	SSF54631	CBS-domain pair
CNE_1c08970	SSF102114	Radical SAM enzymes
CNE_1c08980	SSF52972	ITPase-like
CNE_1c08990	SSF54211	Ribosomal protein S5 domain 2-like
CNE_1c08990	SSF55666	Ribonuclease PH domain 2-like
CNE_1c09000	SSF81606	PP2C-like
CNE_1c09010	SSF56112	Protein kinase-like (PK-like)
CNE_1c09030	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CNE_1c09040	SSF63562	RPB6/omega subunit-like
CNE_1c09050	SSF109604	HD-domain/PDEase-like
CNE_1c09050	SSF55021	ACT-like
CNE_1c09050	SSF81271	TGS-like
CNE_1c09050	SSF81301	Nucleotidyltransferase
CNE_1c09060	SSF46557	GreA transcript cleavage protein, N-terminal domain
CNE_1c09060	SSF54534	FKBP-like
CNE_1c09120	SSF51197	Clavaminate synthase-like
CNE_1c09140	SSF46785	"Winged helix" DNA-binding domain
CNE_1c09140	SSF53383	PLP-dependent transferases
CNE_1c09150	SSF69118	AhpD-like
CNE_1c09200	SSF51197	Clavaminate synthase-like
CNE_1c09220	SSF55073	Nucleotide cyclase
CNE_1c09220	SSF55785	PYP-like sensor domain (PAS domain)
CNE_1c09230	SSF46785	"Winged helix" DNA-binding domain
CNE_1c09230	SSF53383	PLP-dependent transferases
CNE_1c09250	SSF51905	FAD/NAD(P)-binding domain
CNE_1c09260	SSF160996	HI0933 insert domain-like
CNE_1c09260	SSF51905	FAD/NAD(P)-binding domain
CNE_1c09280	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
CNE_1c09300	SSF103088	OmpA-like
CNE_1c09310	SSF53955	Lysozyme-like
CNE_1c09370	SSF56300	Metallo-dependent phosphatases
CNE_1c09380	SSF55103	FAD-linked oxidases, C-terminal domain
CNE_1c09380	SSF56176	FAD-binding/transporter-associated domain-like
CNE_1c09390	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CNE_1c09420	SSF56655	Carbohydrate phosphatase
CNE_1c09430	SSF55486	Metalloproteases ("zincins"), catalytic domain
CNE_1c09430	SSF63737	Leukotriene A4 hydrolase N-terminal domain
CNE_1c09450	SSF51735	NAD(P)-binding Rossmann-fold domains
CNE_1c09450	SSF53223	Aminoacid dehydrogenase-like, N-terminal domain
CNE_1c09450	SSF53659	Isocitrate/Isopropylmalate dehydrogenase-like
CNE_1c09470	SSF56935	Porins
CNE_1c09480	SSF158694	UraD-Like
CNE_1c09490	SSF88713	Glycoside hydrolase/deacetylase
CNE_1c09510	SSF46785	"Winged helix" DNA-binding domain
CNE_1c09510	SSF48008	GntR ligand-binding domain-like
CNE_1c09520	SSF49472	Transthyretin (synonym: prealbumin)
CNE_1c09530	SSF46626	Cytochrome c
CNE_1c09560	SSF51338	Composite domain of metallo-dependent hydrolases
CNE_1c09560	SSF51556	Metallo-dependent hydrolases
CNE_1c09570	SSF51556	Metallo-dependent hydrolases
CNE_1c09590	SSF54665	CO dehydrogenase molybdoprotein N-domain-like
CNE_1c09590	SSF56003	Molybdenum cofactor-binding domain
CNE_1c09600	SSF47741	CO dehydrogenase ISP C-domain like
CNE_1c09600	SSF54292	2Fe-2S ferredoxin-like
CNE_1c09600	SSF55447	CO dehydrogenase flavoprotein C-terminal domain-like
CNE_1c09600	SSF56176	FAD-binding/transporter-associated domain-like
CNE_1c09610	SSF46785	"Winged helix" DNA-binding domain
CNE_1c09610	SSF53850	Periplasmic binding protein-like II
CNE_1c09620	SSF53850	Periplasmic binding protein-like II
CNE_1c09630	SSF46785	"Winged helix" DNA-binding domain
CNE_1c09630	SSF53850	Periplasmic binding protein-like II
CNE_1c09660	SSF46458	Globin-like
CNE_1c09670	SSF48452	TPR-like
CNE_1c09680	SSF102405	MCP/YpsA-like
CNE_1c09690	SSF46689	Homeodomain-like
CNE_1c09710	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
CNE_1c09720	SSF56300	Metallo-dependent phosphatases
CNE_1c09730	SSF53474	alpha/beta-Hydrolases
CNE_1c09770	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
CNE_1c09770	SSF88946	Sigma2 domain of RNA polymerase sigma factors
CNE_1c09780	SSF52467	DHS-like NAD/FAD-binding domain
CNE_1c09780	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
CNE_1c09790	SSF55021	ACT-like
CNE_1c09800	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
CNE_1c09800	SSF51735	NAD(P)-binding Rossmann-fold domains
CNE_1c09830	SSF54106	LysM domain
CNE_1c09840	SSF110921	2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain
CNE_1c09840	SSF51569	Aldolase
CNE_1c09860	SSF53822	Periplasmic binding protein-like I
CNE_1c09870	SSF47060	S15/NS1 RNA-binding domain
CNE_1c09880	SSF46915	Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3
CNE_1c09880	SSF50249	Nucleic acid-binding proteins
CNE_1c09880	SSF54211	Ribosomal protein S5 domain 2-like
CNE_1c09880	SSF54791	Eukaryotic type KH-domain (KH-domain type I)
CNE_1c09880	SSF55666	Ribonuclease PH domain 2-like
CNE_1c09890	SSF50129	GroES-like
CNE_1c09890	SSF51735	NAD(P)-binding Rossmann-fold domains
CNE_1c09900	SSF51351	Triosephosphate isomerase (TIM)
CNE_1c09940	SSF56770	HydA/Nqo6-like
CNE_1c09950	SSF143243	Nqo5-like
CNE_1c09960	SSF56762	HydB/Nqo4-like
CNE_1c09970	SSF52833	Thioredoxin-like
CNE_1c09980	SSF140490	Nqo1C-terminal domain-like
CNE_1c09980	SSF142019	Nqo1 FMN-binding domain-like
CNE_1c09980	SSF142984	Nqo1 middle domain-like
CNE_1c09990	SSF50692	ADC-like
CNE_1c09990	SSF53706	Formate dehydrogenase/DMSO reductase, domains 1-3
CNE_1c09990	SSF54292	2Fe-2S ferredoxin-like
CNE_1c09990	SSF54862	4Fe-4S ferredoxins
CNE_1c10010	SSF54862	4Fe-4S ferredoxins
CNE_1c10080	SSF55811	Nudix
CNE_1c10100	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
CNE_1c10100	SSF56645	Acyl-CoA dehydrogenase NM domain-like
CNE_1c10110	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
CNE_1c10110	SSF56645	Acyl-CoA dehydrogenase NM domain-like
CNE_1c10120	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
CNE_1c10130	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
CNE_1c10140	SSF49503	Cupredoxins
CNE_1c10140	SSF81464	Cytochrome c oxidase subunit II-like, transmembrane region
CNE_1c10150	SSF81442	Cytochrome c oxidase subunit I-like
CNE_1c10160	SSF81452	Cytochrome c oxidase subunit III-like
CNE_1c10180	SSF53822	Periplasmic binding protein-like I
CNE_1c10210	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CNE_1c10220	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CNE_1c10240	SSF54111	Urease, gamma-subunit
CNE_1c10260	SSF51278	Urease, beta-subunit
CNE_1c10270	SSF51338	Composite domain of metallo-dependent hydrolases
CNE_1c10270	SSF51556	Metallo-dependent hydrolases
CNE_1c10280	SSF69287	Urease metallochaperone UreE, N-terminal domain
CNE_1c10280	SSF69737	Urease metallochaperone UreE, C-terminal domain
CNE_1c10300	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CNE_1c10330	SSF47616	GST C-terminal domain-like
CNE_1c10330	SSF52833	Thioredoxin-like
CNE_1c10340	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
CNE_1c10340	SSF56645	Acyl-CoA dehydrogenase NM domain-like
CNE_1c10360	SSF46785	"Winged helix" DNA-binding domain
CNE_1c10360	SSF53850	Periplasmic binding protein-like II
CNE_1c10380	SSF55797	PR-1-like
CNE_1c10400	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
CNE_1c10400	SSF88946	Sigma2 domain of RNA polymerase sigma factors
CNE_1c10410	SSF53300	vWA-like
CNE_1c10420	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
CNE_1c10430	SSF56112	Protein kinase-like (PK-like)
CNE_1c10440	SSF53254	Phosphoglycerate mutase-like
CNE_1c10450	SSF52096	ClpP/crotonase
CNE_1c10460	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
CNE_1c10460	SSF51735	NAD(P)-binding Rossmann-fold domains
CNE_1c10470	SSF47616	GST C-terminal domain-like
CNE_1c10470	SSF52833	Thioredoxin-like
CNE_1c10480	SSF53383	PLP-dependent transferases
CNE_1c10490	SSF88723	PIN domain-like
CNE_1c10510	SSF53187	Zn-dependent exopeptidases
CNE_1c10530	SSF53187	Zn-dependent exopeptidases
CNE_1c10540	SSF53850	Periplasmic binding protein-like II
CNE_1c10550	SSF46785	"Winged helix" DNA-binding domain
CNE_1c10550	SSF53850	Periplasmic binding protein-like II
CNE_1c10560	SSF46785	"Winged helix" DNA-binding domain
CNE_1c10560	SSF53850	Periplasmic binding protein-like II
CNE_1c10570	SSF52467	DHS-like NAD/FAD-binding domain
CNE_1c10570	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
CNE_1c10580	SSF53720	ALDH-like
CNE_1c10590	SSF53850	Periplasmic binding protein-like II
CNE_1c10610	SSF55729	Acyl-CoA N-acyltransferases (Nat)
CNE_1c10620	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CNE_1c10630	SSF46626	Cytochrome c
CNE_1c10640	SSF46626	Cytochrome c
CNE_1c10650	SSF51569	Aldolase
CNE_1c10660	SSF46785	"Winged helix" DNA-binding domain
CNE_1c10660	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
CNE_1c10670	SSF111283	Putative modulator of DNA gyrase, PmbA/TldD
CNE_1c10680	SSF56317	Carbon-nitrogen hydrolase
CNE_1c10700	SSF81301	Nucleotidyltransferase
CNE_1c10700	SSF81593	Nucleotidyltransferase substrate binding subunit/domain
CNE_1c10710	SSF52743	Subtilisin-like
CNE_1c10730	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CNE_1c10740	SSF111331	NAD kinase/diacylglycerol kinase-like
CNE_1c10750	SSF46785	"Winged helix" DNA-binding domain
CNE_1c10750	SSF55781	GAF domain-like
CNE_1c10760	SSF53800	Chelatase
CNE_1c10770	SSF55174	Alpha-L RNA-binding motif
CNE_1c10790	SSF51064	Head domain of nucleotide exchange factor GrpE
CNE_1c10790	SSF58014	Coiled-coil domain of nucleotide exchange factor GrpE
CNE_1c10800	SSF52833	Thioredoxin-like
CNE_1c10810	SSF56931	Outer membrane phospholipase A (OMPLA)
CNE_1c10830	SSF103481	Multidrug resistance efflux transporter EmrE
CNE_1c10840	SSF55469	FMN-dependent nitroreductase-like
CNE_1c10860	SSF53474	alpha/beta-Hydrolases
CNE_1c10870	SSF51905	FAD/NAD(P)-binding domain
CNE_1c10880	SSF46689	Homeodomain-like
CNE_1c10890	SSF48150	DNA-glycosylase
CNE_1c10900	SSF54862	4Fe-4S ferredoxins
CNE_1c10910	SSF46689	Homeodomain-like
CNE_1c10910	SSF48498	Tetracyclin repressor-like, C-terminal domain
CNE_1c10920	SSF53474	alpha/beta-Hydrolases
CNE_1c10930	SSF53383	PLP-dependent transferases
CNE_1c10940	SSF46600	C-terminal UvrC-binding domain of UvrB
CNE_1c10940	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CNE_1c10950	SSF54909	Dimeric alpha+beta barrel
CNE_1c10980	SSF52788	Phosphotyrosine protein phosphatases I
CNE_1c11000	SSF46785	"Winged helix" DNA-binding domain
CNE_1c11010	SSF53383	PLP-dependent transferases
CNE_1c11020	SSF82649	SufE/NifU
CNE_1c11030	SSF89360	HesB-like domain
CNE_1c11050	SSF46565	Chaperone J-domain
CNE_1c11050	SSF47144	HSC20 (HSCB), C-terminal oligomerisation domain
CNE_1c11060	SSF100920	Heat shock protein 70kD (HSP70), peptide-binding domain
CNE_1c11060	SSF100934	Heat shock protein 70kD (HSP70), C-terminal subdomain
CNE_1c11060	SSF53067	Actin-like ATPase domain
CNE_1c11070	SSF54292	2Fe-2S ferredoxin-like
CNE_1c11080	SSF140319	IscX-like
CNE_1c11090	SSF56925	OMPA-like
CNE_1c11110	SSF50249	Nucleic acid-binding proteins
CNE_1c11110	SSF55681	Class II aaRS and biotin synthetases
CNE_1c11120	SSF51735	NAD(P)-binding Rossmann-fold domains
CNE_1c11130	SSF75620	Release factor
CNE_1c11140	SSF51261	Duplicated hybrid motif
CNE_1c11140	SSF54106	LysM domain
CNE_1c11150	SSF64182	DHH phosphoesterases
CNE_1c11180	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CNE_1c11190	SSF51556	Metallo-dependent hydrolases
CNE_1c11200	SSF143422	Transposase IS200-like
CNE_1c11230	SSF46689	Homeodomain-like
CNE_1c11230	SSF53697	SIS domain
CNE_1c11240	SSF143975	IlvD/EDD N-terminal domain-like
CNE_1c11240	SSF52016	LeuD/IlvD-like
CNE_1c11250	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CNE_1c11260	SSF56059	Glutathione synthetase ATP-binding domain-like
CNE_1c11280	SSF54001	Cysteine proteinases
CNE_1c11290	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
CNE_1c11300	SSF53474	alpha/beta-Hydrolases
CNE_1c11310	SSF52317	Class I glutamine amidotransferase-like
CNE_1c11310	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CNE_1c11320	SSF51569	Aldolase
CNE_1c11330	SSF54909	Dimeric alpha+beta barrel
CNE_1c11340	SSF51604	Enolase C-terminal domain-like
CNE_1c11340	SSF54826	Enolase N-terminal domain-like
CNE_1c11370	SSF118352	HSP33 redox switch-like
CNE_1c11370	SSF64397	Hsp33 domain
CNE_1c11380	SSF51161	Trimeric LpxA-like enzymes
CNE_1c11390	SSF47240	Ferritin-like
CNE_1c11400	SSF103473	MFS general substrate transporter
CNE_1c11410	SSF56601	beta-lactamase/transpeptidase-like
CNE_1c11420	SSF46785	"Winged helix" DNA-binding domain
CNE_1c11420	SSF53850	Periplasmic binding protein-like II
CNE_1c11450	SSF56801	Acetyl-CoA synthetase-like
CNE_1c11460	SSF53474	alpha/beta-Hydrolases
CNE_1c11470	SSF51905	FAD/NAD(P)-binding domain
CNE_1c11480	SSF89550	PHP domain-like
CNE_1c11490	SSF55821	YrdC/RibB
CNE_1c11510	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
CNE_1c11520	SSF51569	Aldolase
CNE_1c11540	SSF56281	Metallo-hydrolase/oxidoreductase
CNE_1c11560	SSF51197	Clavaminate synthase-like
CNE_1c11570	SSF54534	FKBP-like
CNE_1c11580	SSF56300	Metallo-dependent phosphatases
CNE_1c11590	SSF48334	DNA repair protein MutS, domain III
CNE_1c11590	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CNE_1c11590	SSF53150	DNA repair protein MutS, domain II
CNE_1c11590	SSF55271	DNA repair protein MutS, domain I
CNE_1c11600	SSF56349	DNA breaking-rejoining enzymes
CNE_1c11620	SSF88697	PUA domain-like
CNE_1c11690	SSF109709	KorB DNA-binding domain-like
CNE_1c11690	SSF110849	ParB/Sulfiredoxin
CNE_1c11690	SSF81273	H-NS histone-like proteins
CNE_1c11760	SSF51306	LexA/Signal peptidase
CNE_1c11930	SSF143749	Phage tail protein-like
CNE_1c12000	SSF69279	Phage tail proteins
CNE_1c12050	SSF49899	Concanavalin A-like lectins/glucanases
CNE_1c12080	SSF53955	Lysozyme-like
CNE_1c12130	SSF56091	DNA ligase/mRNA capping enzyme, catalytic domain
CNE_1c12170	SSF52402	Adenine nucleotide alpha hydrolases-like
CNE_1c12190	SSF56655	Carbohydrate phosphatase
CNE_1c12200	SSF75217	alpha/beta knot
CNE_1c12210	SSF51161	Trimeric LpxA-like enzymes
CNE_1c12220	SSF56300	Metallo-dependent phosphatases
CNE_1c12230	SSF50891	Cyclophilin-like
CNE_1c12240	SSF50891	Cyclophilin-like
CNE_1c12250	SSF48452	TPR-like
CNE_1c12260	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
CNE_1c12260	SSF52374	Nucleotidylyl transferase
CNE_1c12270	SSF48150	DNA-glycosylase
CNE_1c12280	SSF52096	ClpP/crotonase
CNE_1c12290	SSF52402	Adenine nucleotide alpha hydrolases-like
CNE_1c12290	SSF56037	PheT/TilS domain
CNE_1c12290	SSF82829	MesJ substrate recognition domain-like
CNE_1c12300	SSF53633	Carbamate kinase-like
CNE_1c12300	SSF55021	ACT-like
CNE_1c12320	SSF141868	EAL domain-like
CNE_1c12320	SSF55073	Nucleotide cyclase
CNE_1c12320	SSF55781	GAF domain-like
CNE_1c12320	SSF55785	PYP-like sensor domain (PAS domain)
CNE_1c12350	SSF51230	Single hybrid motif
CNE_1c12350	SSF51246	Rudiment single hybrid motif
CNE_1c12350	SSF51569	Aldolase
CNE_1c12350	SSF52440	PreATP-grasp domain
CNE_1c12350	SSF56059	Glutathione synthetase ATP-binding domain-like
CNE_1c12350	SSF89000	post-HMGL domain-like
CNE_1c12370	SSF52091	SpoIIaa-like
CNE_1c12380	SSF103473	MFS general substrate transporter
CNE_1c12390	SSF53850	Periplasmic binding protein-like II
CNE_1c12400	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
CNE_1c12400	SSF52922	TK C-terminal domain-like
CNE_1c12400	SSF53323	Pyruvate-ferredoxin oxidoreductase, PFOR, domain III
CNE_1c12410	SSF89733	L-sulfolactate dehydrogenase-like
CNE_1c12420	SSF46785	"Winged helix" DNA-binding domain
CNE_1c12420	SSF64288	Chorismate lyase-like
CNE_1c12470	SSF50129	GroES-like
CNE_1c12470	SSF51735	NAD(P)-binding Rossmann-fold domains
CNE_1c12480	SSF51197	Clavaminate synthase-like
CNE_1c12490	SSF51735	NAD(P)-binding Rossmann-fold domains
CNE_1c12490	SSF52283	Formate/glycerate dehydrogenase catalytic domain-like
CNE_1c12510	SSF52467	DHS-like NAD/FAD-binding domain
CNE_1c12530	SSF51735	NAD(P)-binding Rossmann-fold domains
CNE_1c12540	SSF56112	Protein kinase-like (PK-like)
CNE_1c12570	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CNE_1c12610	SSF48452	TPR-like
CNE_1c12620	SSF46894	C-terminal effector domain of the bipartite response regulators
CNE_1c12620	SSF48452	TPR-like
CNE_1c12620	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CNE_1c12620	SSF55073	Nucleotide cyclase
CNE_1c12630	SSF48208	Six-hairpin glycosidases
CNE_1c12630	SSF52833	Thioredoxin-like
CNE_1c12660	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CNE_1c12660	SSF81271	TGS-like
CNE_1c12670	SSF103473	MFS general substrate transporter
CNE_1c12680	SSF53098	Ribonuclease H-like
CNE_1c12710	SSF143422	Transposase IS200-like
CNE_1c12730	SSF103473	MFS general substrate transporter
CNE_1c12750	SSF56925	OMPA-like
CNE_1c12760	SSF51182	RmlC-like cupins
CNE_1c12770	SSF56935	Porins
CNE_1c12780	SSF51735	NAD(P)-binding Rossmann-fold domains
CNE_1c12790	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
CNE_1c12800	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
CNE_1c12810	SSF53901	Thiolase-like
CNE_1c12820	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
CNE_1c12820	SSF56645	Acyl-CoA dehydrogenase NM domain-like
CNE_1c12830	SSF46894	C-terminal effector domain of the bipartite response regulators
CNE_1c12830	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CNE_1c12840	SSF46894	C-terminal effector domain of the bipartite response regulators
CNE_1c12840	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CNE_1c12850	SSF53850	Periplasmic binding protein-like II
CNE_1c12860	SSF89796	CoA-transferase family III (CaiB/BaiF)
CNE_1c12880	SSF56801	Acetyl-CoA synthetase-like
CNE_1c12890	SSF50249	Nucleic acid-binding proteins
CNE_1c12900	SSF53901	Thiolase-like
CNE_1c12910	SSF89796	CoA-transferase family III (CaiB/BaiF)
CNE_1c12920	SSF53187	Zn-dependent exopeptidases
CNE_1c12930	SSF55103	FAD-linked oxidases, C-terminal domain
CNE_1c12930	SSF56176	FAD-binding/transporter-associated domain-like
CNE_1c12950	SSF52218	Flavoproteins
CNE_1c12980	SSF53474	alpha/beta-Hydrolases
CNE_1c12990	SSF53383	PLP-dependent transferases
CNE_1c13000	SSF54631	CBS-domain pair
CNE_1c13010	SSF103473	MFS general substrate transporter
CNE_1c13010	SSF69593	Glycerol-3-phosphate (1)-acyltransferase
CNE_1c13020	SSF47616	GST C-terminal domain-like
CNE_1c13020	SSF52833	Thioredoxin-like
CNE_1c13030	SSF103263	Chorismate synthase, AroC
CNE_1c13040	SSF103473	MFS general substrate transporter
CNE_1c13050	SSF51905	FAD/NAD(P)-binding domain
CNE_1c13060	SSF46785	"Winged helix" DNA-binding domain
CNE_1c13060	SSF48008	GntR ligand-binding domain-like
CNE_1c13070	SSF141371	PilZ domain-like
CNE_1c13080	SSF53474	alpha/beta-Hydrolases
CNE_1c13100	SSF143422	Transposase IS200-like
CNE_1c13110	SSF53098	Ribonuclease H-like
CNE_1c13130	SSF158855	Lipase chaperone-like
CNE_1c13140	SSF51905	FAD/NAD(P)-binding domain
CNE_1c13140	SSF54373	FAD-linked reductases, C-terminal domain
CNE_1c13140	SSF54862	4Fe-4S ferredoxins
CNE_1c13150	SSF51735	NAD(P)-binding Rossmann-fold domains
CNE_1c13180	SSF53850	Periplasmic binding protein-like II
CNE_1c13190	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
CNE_1c13200	SSF46894	C-terminal effector domain of the bipartite response regulators
CNE_1c13200	SSF55785	PYP-like sensor domain (PAS domain)
CNE_1c13210	SSF100950	NagB/RpiA/CoA transferase-like
CNE_1c13220	SSF100950	NagB/RpiA/CoA transferase-like
CNE_1c13250	SSF51735	NAD(P)-binding Rossmann-fold domains
CNE_1c13260	SSF53474	alpha/beta-Hydrolases
CNE_1c13270	SSF55298	YjgF-like
CNE_1c13280	SSF109604	HD-domain/PDEase-like
CNE_1c13280	SSF55021	ACT-like
CNE_1c13280	SSF81271	TGS-like
CNE_1c13280	SSF81301	Nucleotidyltransferase
CNE_1c13300	SSF52954	Class II aaRS ABD-related
CNE_1c13300	SSF55186	ThrRS/AlaRS common domain
CNE_1c13300	SSF55681	Class II aaRS and biotin synthetases
CNE_1c13300	SSF81271	TGS-like
CNE_1c13310	SSF54364	Translation initiation factor IF3, N-terminal domain
CNE_1c13310	SSF55200	Translation initiation factor IF3, C-terminal domain
CNE_1c13320	SSF143034	L35p-like
CNE_1c13330	SSF74731	Ribosomal protein L20
CNE_1c13340	SSF46589	tRNA-binding arm
CNE_1c13340	SSF55681	Class II aaRS and biotin synthetases
CNE_1c13350	SSF46955	Putative DNA-binding domain
CNE_1c13350	SSF50249	Nucleic acid-binding proteins
CNE_1c13350	SSF54991	Anticodon-binding domain of PheRS
CNE_1c13350	SSF55681	Class II aaRS and biotin synthetases
CNE_1c13350	SSF56037	PheT/TilS domain
CNE_1c13360	SSF47729	IHF-like DNA-binding proteins
CNE_1c13370	SSF46955	Putative DNA-binding domain
CNE_1c13400	SSF56349	DNA breaking-rejoining enzymes
CNE_1c13460	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
CNE_1c13480	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
CNE_1c13550	SSF88874	Receptor-binding domain of short tail fibre protein gp12
CNE_1c13600	SSF53955	Lysozyme-like
CNE_1c13720	SSF47413	lambda repressor-like DNA-binding domains
CNE_1c13730	SSF143011	RelE-like
CNE_1c13740	SSF51182	RmlC-like cupins
CNE_1c13800	SSF51735	NAD(P)-binding Rossmann-fold domains
CNE_1c13800	SSF53223	Aminoacid dehydrogenase-like, N-terminal domain
CNE_1c13810	SSF46785	"Winged helix" DNA-binding domain
CNE_1c13820	SSF100950	NagB/RpiA/CoA transferase-like
CNE_1c13850	SSF53850	Periplasmic binding protein-like II
CNE_1c13880	SSF46785	"Winged helix" DNA-binding domain
CNE_1c13880	SSF53850	Periplasmic binding protein-like II
CNE_1c13890	SSF51338	Composite domain of metallo-dependent hydrolases
CNE_1c13890	SSF51556	Metallo-dependent hydrolases
CNE_1c13910	SSF160272	Shew3726-like
CNE_1c13920	SSF52091	SpoIIaa-like
CNE_1c13930	SSF46785	"Winged helix" DNA-binding domain
CNE_1c13940	SSF56219	DNase I-like
CNE_1c13950	SSF55486	Metalloproteases ("zincins"), catalytic domain
CNE_1c13960	SSF51735	NAD(P)-binding Rossmann-fold domains
CNE_1c13960	SSF53223	Aminoacid dehydrogenase-like, N-terminal domain
CNE_1c13980	SSF46894	C-terminal effector domain of the bipartite response regulators
CNE_1c13980	SSF52172	CheY-like
CNE_1c13990	SSF47384	Homodimeric domain of signal transducing histidine kinase
CNE_1c13990	SSF55785	PYP-like sensor domain (PAS domain)
CNE_1c13990	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
CNE_1c14010	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
CNE_1c14010	SSF52922	TK C-terminal domain-like
CNE_1c14020	SSF47005	Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex
CNE_1c14020	SSF51230	Single hybrid motif
CNE_1c14020	SSF52777	CoA-dependent acyltransferases
CNE_1c14030	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
CNE_1c14040	SSF51230	Single hybrid motif
CNE_1c14040	SSF51905	FAD/NAD(P)-binding domain
CNE_1c14040	SSF55424	FAD/NAD-linked reductases, dimerisation (C-terminal) domain
CNE_1c14050	SSF52402	Adenine nucleotide alpha hydrolases-like
CNE_1c14070	SSF102114	Radical SAM enzymes
CNE_1c14090	SSF52768	Arginase/deacetylase
CNE_1c14100	SSF103481	Multidrug resistance efflux transporter EmrE
CNE_1c14110	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
CNE_1c14120	SSF55469	FMN-dependent nitroreductase-like
CNE_1c14130	SSF56601	beta-lactamase/transpeptidase-like
CNE_1c14140	SSF55103	FAD-linked oxidases, C-terminal domain
CNE_1c14140	SSF56176	FAD-binding/transporter-associated domain-like
CNE_1c14150	SSF46785	"Winged helix" DNA-binding domain
CNE_1c14150	SSF48008	GntR ligand-binding domain-like
CNE_1c14160	SSF46785	"Winged helix" DNA-binding domain
CNE_1c14160	SSF55781	GAF domain-like
CNE_1c14180	SSF100950	NagB/RpiA/CoA transferase-like
CNE_1c14180	SSF54862	4Fe-4S ferredoxins
CNE_1c14200	SSF46785	"Winged helix" DNA-binding domain
CNE_1c14200	SSF53850	Periplasmic binding protein-like II
CNE_1c14210	SSF51735	NAD(P)-binding Rossmann-fold domains
CNE_1c14220	SSF53850	Periplasmic binding protein-like II
CNE_1c14230	SSF53850	Periplasmic binding protein-like II
CNE_1c14240	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CNE_1c14260	SSF53822	Periplasmic binding protein-like I
CNE_1c14270	SSF89392	Prokaryotic lipoproteins and lipoprotein localization factors
CNE_1c14290	SSF51395	FMN-linked oxidoreductases
CNE_1c14300	SSF55729	Acyl-CoA N-acyltransferases (Nat)
CNE_1c14310	SSF55729	Acyl-CoA N-acyltransferases (Nat)
CNE_1c14320	SSF55811	Nudix
CNE_1c14360	SSF52343	Ferredoxin reductase-like, C-terminal NADP-linked domain
CNE_1c14360	SSF54862	4Fe-4S ferredoxins
CNE_1c14360	SSF63380	Riboflavin synthase domain-like
CNE_1c14370	SSF47240	Ferritin-like
CNE_1c14380	SSF52096	ClpP/crotonase
CNE_1c14390	SSF47413	lambda repressor-like DNA-binding domains
CNE_1c14390	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CNE_1c14400	SSF56801	Acetyl-CoA synthetase-like
CNE_1c14410	SSF53474	alpha/beta-Hydrolases
CNE_1c14420	SSF53822	Periplasmic binding protein-like I
CNE_1c14450	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CNE_1c14460	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CNE_1c14500	SSF46894	C-terminal effector domain of the bipartite response regulators
CNE_1c14500	SSF53474	alpha/beta-Hydrolases
CNE_1c14510	SSF49764	HSP20-like chaperones
CNE_1c14520	SSF49764	HSP20-like chaperones
CNE_1c14530	SSF51735	NAD(P)-binding Rossmann-fold domains
CNE_1c14550	SSF52172	CheY-like
CNE_1c14560	SSF47384	Homodimeric domain of signal transducing histidine kinase
CNE_1c14560	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
CNE_1c14570	SSF158832	Tex N-terminal region-like
CNE_1c14570	SSF47781	RuvA domain 2-like
CNE_1c14570	SSF50249	Nucleic acid-binding proteins
CNE_1c14570	SSF53098	Ribonuclease H-like
CNE_1c14600	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CNE_1c14610	SSF48452	TPR-like
CNE_1c14620	SSF55120	Pseudouridine synthase
CNE_1c14620	SSF55174	Alpha-L RNA-binding motif
CNE_1c14630	SSF64438	CNF1/YfiH-like putative cysteine hydrolases
CNE_1c14650	SSF53474	alpha/beta-Hydrolases
CNE_1c14660	SSF53901	Thiolase-like
CNE_1c14670	SSF51735	NAD(P)-binding Rossmann-fold domains
CNE_1c14690	SSF51395	FMN-linked oxidoreductases
CNE_1c14700	SSF102114	Radical SAM enzymes
CNE_1c14710	SSF53901	Thiolase-like
CNE_1c14730	SSF53383	PLP-dependent transferases
CNE_1c14780	SSF56784	HAD-like
CNE_1c14790	SSF53187	Zn-dependent exopeptidases
CNE_1c14790	SSF55031	Bacterial exopeptidase dimerisation domain
CNE_1c14800	SSF53187	Zn-dependent exopeptidases
CNE_1c14800	SSF55031	Bacterial exopeptidase dimerisation domain
CNE_1c14810	SSF141259	CarD-like
CNE_1c14810	SSF143517	TRCF domain-like
CNE_1c14810	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CNE_1c14820	SSF53448	Nucleotide-diphospho-sugar transferases
CNE_1c14830	SSF69765	IpsF-like
CNE_1c14840	SSF55729	Acyl-CoA N-acyltransferases (Nat)
CNE_1c14850	SSF69118	AhpD-like
CNE_1c14860	SSF52833	Thioredoxin-like
CNE_1c14880	SSF103473	MFS general substrate transporter
CNE_1c14890	SSF47384	Homodimeric domain of signal transducing histidine kinase
CNE_1c14890	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
CNE_1c14900	SSF46894	C-terminal effector domain of the bipartite response regulators
CNE_1c14900	SSF52172	CheY-like
CNE_1c14920	SSF53187	Zn-dependent exopeptidases
CNE_1c14920	SSF55031	Bacterial exopeptidase dimerisation domain
CNE_1c14930	SSF48576	Terpenoid synthases
CNE_1c14940	SSF111369	HlyD-like secretion proteins
CNE_1c14950	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
CNE_1c14950	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
CNE_1c14950	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
CNE_1c14960	SSF51412	Inosine monophosphate dehydrogenase (IMPDH)
CNE_1c14970	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
CNE_1c14970	SSF56645	Acyl-CoA dehydrogenase NM domain-like
CNE_1c14980	SSF56645	Acyl-CoA dehydrogenase NM domain-like
CNE_1c14990	SSF56801	Acetyl-CoA synthetase-like
CNE_1c15000	SSF51735	NAD(P)-binding Rossmann-fold domains
CNE_1c15010	SSF53850	Periplasmic binding protein-like II
CNE_1c15020	SSF53901	Thiolase-like
CNE_1c15030	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
CNE_1c15030	SSF56645	Acyl-CoA dehydrogenase NM domain-like
CNE_1c15040	SSF46894	C-terminal effector domain of the bipartite response regulators
CNE_1c15040	SSF48452	TPR-like
CNE_1c15040	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CNE_1c15050	SSF75304	Amidase signature (AS) enzymes
CNE_1c15060	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CNE_1c15070	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CNE_1c15080	SSF161098	MetI-like
CNE_1c15090	SSF161098	MetI-like
CNE_1c15100	SSF53850	Periplasmic binding protein-like II
CNE_1c15110	SSF53187	Zn-dependent exopeptidases
CNE_1c15110	SSF55031	Bacterial exopeptidase dimerisation domain
CNE_1c15130	SSF46785	"Winged helix" DNA-binding domain
CNE_1c15130	SSF55781	GAF domain-like
CNE_1c15160	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
CNE_1c15170	SSF51905	FAD/NAD(P)-binding domain
CNE_1c15170	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
CNE_1c15180	SSF102735	Trigger factor ribosome-binding domain
CNE_1c15180	SSF109998	Triger factor/SurA peptide-binding domain-like
CNE_1c15180	SSF54534	FKBP-like
CNE_1c15190	SSF52096	ClpP/crotonase
CNE_1c15200	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CNE_1c15200	SSF57716	Glucocorticoid receptor-like (DNA-binding domain)
CNE_1c15210	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CNE_1c15210	SSF54211	Ribosomal protein S5 domain 2-like
CNE_1c15210	SSF88697	PUA domain-like
CNE_1c15240	SSF109998	Triger factor/SurA peptide-binding domain-like
CNE_1c15240	SSF54534	FKBP-like
CNE_1c15250	SSF52266	SGNH hydrolase
CNE_1c15260	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CNE_1c15270	SSF53697	SIS domain
CNE_1c15280	SSF103481	Multidrug resistance efflux transporter EmrE
CNE_1c15290	SSF53613	Ribokinase-like
CNE_1c15290	SSF64153	YjeF N-terminal domain-like
CNE_1c15300	SSF51905	FAD/NAD(P)-binding domain
CNE_1c15300	SSF54373	FAD-linked reductases, C-terminal domain
CNE_1c15310	SSF143422	Transposase IS200-like
CNE_1c15370	SSF75304	Amidase signature (AS) enzymes
CNE_1c15380	SSF46785	"Winged helix" DNA-binding domain
CNE_1c15390	SSF109736	FGAM synthase PurL, linker domain
CNE_1c15390	SSF52317	Class I glutamine amidotransferase-like
CNE_1c15390	SSF55326	PurM N-terminal domain-like
CNE_1c15390	SSF56042	PurM C-terminal domain-like
CNE_1c15390	SSF82697	PurS-like
CNE_1c15410	SSF102215	Creatininase
CNE_1c15420	SSF102215	Creatininase
CNE_1c15440	SSF109998	Triger factor/SurA peptide-binding domain-like
CNE_1c15440	SSF54534	FKBP-like
CNE_1c15450	SSF82657	BolA-like
CNE_1c15470	SSF51316	Mss4-like
CNE_1c15500	SSF56801	Acetyl-CoA synthetase-like
CNE_1c15510	SSF53822	Periplasmic binding protein-like I
CNE_1c15540	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CNE_1c15550	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CNE_1c15560	SSF56935	Porins
CNE_1c15580	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
CNE_1c15580	SSF51735	NAD(P)-binding Rossmann-fold domains
CNE_1c15580	SSF52096	ClpP/crotonase
CNE_1c15590	SSF52499	Isochorismatase-like hydrolases
CNE_1c15600	SSF53901	Thiolase-like
CNE_1c15610	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
CNE_1c15610	SSF56645	Acyl-CoA dehydrogenase NM domain-like
CNE_1c15620	SSF51735	NAD(P)-binding Rossmann-fold domains
CNE_1c15630	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
CNE_1c15640	SSF50129	GroES-like
CNE_1c15640	SSF51735	NAD(P)-binding Rossmann-fold domains
CNE_1c15650	SSF53639	AraD/HMP-PK domain-like
CNE_1c15660	SSF47616	GST C-terminal domain-like
CNE_1c15660	SSF52833	Thioredoxin-like
CNE_1c15670	SSF51735	NAD(P)-binding Rossmann-fold domains
CNE_1c15680	SSF53474	alpha/beta-Hydrolases
CNE_1c15690	SSF46785	"Winged helix" DNA-binding domain
CNE_1c15700	SSF52016	LeuD/IlvD-like
CNE_1c15710	SSF52949	Macro domain-like
CNE_1c15720	SSF56796	Dehydroquinate synthase-like
CNE_1c15730	SSF53474	alpha/beta-Hydrolases
CNE_1c15740	SSF53850	Periplasmic binding protein-like II
CNE_1c15750	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
CNE_1c15760	SSF47473	EF-hand
CNE_1c15770	SSF51735	NAD(P)-binding Rossmann-fold domains
CNE_1c15790	SSF51658	Xylose isomerase-like
CNE_1c15800	SSF103473	MFS general substrate transporter
CNE_1c15810	SSF53639	AraD/HMP-PK domain-like
CNE_1c15820	SSF142764	YgbK-like
CNE_1c15830	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
CNE_1c15830	SSF51735	NAD(P)-binding Rossmann-fold domains
CNE_1c15840	SSF46785	"Winged helix" DNA-binding domain
CNE_1c15840	SSF48008	GntR ligand-binding domain-like
CNE_1c15850	SSF55729	Acyl-CoA N-acyltransferases (Nat)
CNE_1c15880	SSF103025	Folate-binding domain
CNE_1c15900	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CNE_1c15910	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CNE_1c15930	SSF55729	Acyl-CoA N-acyltransferases (Nat)
CNE_1c15940	SSF51556	Metallo-dependent hydrolases
CNE_1c15950	SSF48403	Ankyrin repeat
CNE_1c15970	SSF109854	DinB/YfiT-like putative metalloenzymes
CNE_1c15970	SSF56436	C-type lectin-like
CNE_1c15980	SSF52218	Flavoproteins
CNE_1c15990	SSF46785	"Winged helix" DNA-binding domain
CNE_1c15990	SSF53850	Periplasmic binding protein-like II
CNE_1c16020	SSF141868	EAL domain-like
CNE_1c16030	SSF46785	"Winged helix" DNA-binding domain
CNE_1c16030	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CNE_1c16040	SSF51182	RmlC-like cupins
CNE_1c16050	SSF69118	AhpD-like
CNE_1c16060	SSF53474	alpha/beta-Hydrolases
CNE_1c16070	SSF53850	Periplasmic binding protein-like II
CNE_1c16080	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CNE_1c16090	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CNE_1c16100	SSF161098	MetI-like
CNE_1c16110	SSF161098	MetI-like
CNE_1c16120	SSF51905	FAD/NAD(P)-binding domain
CNE_1c16130	SSF46785	"Winged helix" DNA-binding domain
CNE_1c16130	SSF53850	Periplasmic binding protein-like II
CNE_1c16140	SSF161098	MetI-like
CNE_1c16140	SSF53850	Periplasmic binding protein-like II
CNE_1c16150	SSF46785	"Winged helix" DNA-binding domain
CNE_1c16150	SSF53383	PLP-dependent transferases
CNE_1c16170	SSF46626	Cytochrome c
CNE_1c16180	SSF51905	FAD/NAD(P)-binding domain
CNE_1c16190	SSF69593	Glycerol-3-phosphate (1)-acyltransferase
CNE_1c16200	SSF48403	Ankyrin repeat
CNE_1c16210	SSF46785	"Winged helix" DNA-binding domain
CNE_1c16210	SSF54909	Dimeric alpha+beta barrel
CNE_1c16220	SSF51182	RmlC-like cupins
CNE_1c16240	SSF56801	Acetyl-CoA synthetase-like
CNE_1c16250	SSF55021	ACT-like
CNE_1c16280	SSF46565	Chaperone J-domain
CNE_1c16290	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
CNE_1c16300	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
CNE_1c16310	SSF53067	Actin-like ATPase domain
CNE_1c16320	SSF53067	Actin-like ATPase domain
CNE_1c16340	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
CNE_1c16340	SSF88946	Sigma2 domain of RNA polymerase sigma factors
CNE_1c16350	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
CNE_1c16370	SSF103473	MFS general substrate transporter
CNE_1c16380	SSF51905	FAD/NAD(P)-binding domain
CNE_1c16380	SSF55424	FAD/NAD-linked reductases, dimerisation (C-terminal) domain
CNE_1c16390	SSF50022	ISP domain
CNE_1c16400	SSF54427	NTF2-like
CNE_1c16410	SSF50022	ISP domain
CNE_1c16410	SSF55961	Bet v1-like
CNE_1c16420	SSF46785	"Winged helix" DNA-binding domain
CNE_1c16420	SSF53850	Periplasmic binding protein-like II
CNE_1c16440	SSF46785	"Winged helix" DNA-binding domain
CNE_1c16440	SSF53850	Periplasmic binding protein-like II
CNE_1c16450	SSF100950	NagB/RpiA/CoA transferase-like
CNE_1c16480	SSF52096	ClpP/crotonase
CNE_1c16490	SSF52096	ClpP/crotonase
CNE_1c16510	SSF52151	FabD/lysophospholipase-like
CNE_1c16510	SSF55048	Probable ACP-binding domain of malonyl-CoA ACP transacylase
CNE_1c16520	SSF49777	PEBP-like
CNE_1c16530	SSF103473	MFS general substrate transporter
CNE_1c16560	SSF55124	Nitrite/Sulfite reductase N-terminal domain-like
CNE_1c16560	SSF56014	Nitrite and sulphite reductase 4Fe-4S domain-like
CNE_1c16580	SSF81452	Cytochrome c oxidase subunit III-like
CNE_1c16590	SSF81442	Cytochrome c oxidase subunit I-like
CNE_1c16600	SSF49503	Cupredoxins
CNE_1c16600	SSF81464	Cytochrome c oxidase subunit II-like, transmembrane region
CNE_1c16610	SSF46785	"Winged helix" DNA-binding domain
CNE_1c16610	SSF53383	PLP-dependent transferases
CNE_1c16620	SSF46785	"Winged helix" DNA-binding domain
CNE_1c16620	SSF53850	Periplasmic binding protein-like II
CNE_1c16630	SSF53850	Periplasmic binding protein-like II
CNE_1c16640	SSF53383	PLP-dependent transferases
CNE_1c16650	SSF47616	GST C-terminal domain-like
CNE_1c16650	SSF52833	Thioredoxin-like
CNE_1c16660	SSF53850	Periplasmic binding protein-like II
CNE_1c16670	SSF48557	L-aspartase-like
CNE_1c16680	SSF46785	"Winged helix" DNA-binding domain
CNE_1c16680	SSF53850	Periplasmic binding protein-like II
CNE_1c16690	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
CNE_1c16710	SSF53098	Ribonuclease H-like
CNE_1c16710	SSF56672	DNA/RNA polymerases
CNE_1c16720	SSF111369	HlyD-like secretion proteins
CNE_1c16730	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
CNE_1c16730	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
CNE_1c16730	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
CNE_1c16740	SSF56954	Outer membrane efflux proteins (OEP)
CNE_1c16750	SSF54665	CO dehydrogenase molybdoprotein N-domain-like
CNE_1c16750	SSF56003	Molybdenum cofactor-binding domain
CNE_1c16760	SSF47741	CO dehydrogenase ISP C-domain like
CNE_1c16760	SSF54292	2Fe-2S ferredoxin-like
CNE_1c16770	SSF56300	Metallo-dependent phosphatases
CNE_1c16780	SSF51905	FAD/NAD(P)-binding domain
CNE_1c16790	SSF75304	Amidase signature (AS) enzymes
CNE_1c16800	SSF53850	Periplasmic binding protein-like II
CNE_1c16810	SSF46785	"Winged helix" DNA-binding domain
CNE_1c16810	SSF53850	Periplasmic binding protein-like II
CNE_1c16820	SSF51905	FAD/NAD(P)-binding domain
CNE_1c16820	SSF54373	FAD-linked reductases, C-terminal domain
CNE_1c16830	SSF54197	HIT-like
CNE_1c16850	SSF46785	"Winged helix" DNA-binding domain
CNE_1c16850	SSF53850	Periplasmic binding protein-like II
CNE_1c16860	SSF53850	Periplasmic binding protein-like II
CNE_1c16870	SSF51735	NAD(P)-binding Rossmann-fold domains
CNE_1c16880	SSF51735	NAD(P)-binding Rossmann-fold domains
CNE_1c16880	SSF52283	Formate/glycerate dehydrogenase catalytic domain-like
CNE_1c16890	SSF48256	Citrate synthase
CNE_1c16900	SSF46626	Cytochrome c
CNE_1c16910	SSF50998	Quinoprotein alcohol dehydrogenase-like
CNE_1c16930	SSF48403	Ankyrin repeat
CNE_1c16940	SSF50974	Nitrous oxide reductase, N-terminal domain
CNE_1c16950	SSF56935	Porins
CNE_1c16960	SSF51735	NAD(P)-binding Rossmann-fold domains
CNE_1c17000	SSF101744	Rof/RNase P subunit-like
CNE_1c17010	SSF46785	"Winged helix" DNA-binding domain
CNE_1c17030	SSF82784	OsmC-like
CNE_1c17040	SSF46689	Homeodomain-like
CNE_1c17040	SSF48498	Tetracyclin repressor-like, C-terminal domain
CNE_1c17050	SSF51395	FMN-linked oxidoreductases
CNE_1c17080	SSF142921	WGR domain-like
CNE_1c17080	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CNE_1c17090	SSF74653	TolA/TonB C-terminal domain
CNE_1c17110	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
CNE_1c17130	SSF55781	GAF domain-like
CNE_1c17140	SSF48452	TPR-like
CNE_1c17140	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CNE_1c17140	SSF55073	Nucleotide cyclase
CNE_1c17150	SSF53659	Isocitrate/Isopropylmalate dehydrogenase-like
CNE_1c17160	SSF48557	L-aspartase-like
CNE_1c17170	SSF53720	ALDH-like
CNE_1c17180	SSF56784	HAD-like
CNE_1c17190	SSF51905	FAD/NAD(P)-binding domain
CNE_1c17200	SSF53850	Periplasmic binding protein-like II
CNE_1c17210	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CNE_1c17220	SSF161098	MetI-like
CNE_1c17230	SSF161098	MetI-like
CNE_1c17240	SSF46894	C-terminal effector domain of the bipartite response regulators
CNE_1c17240	SSF52172	CheY-like
CNE_1c17250	SSF56935	Porins
CNE_1c17260	SSF56801	Acetyl-CoA synthetase-like
CNE_1c17290	SSF55729	Acyl-CoA N-acyltransferases (Nat)
CNE_1c17300	SSF51182	RmlC-like cupins
CNE_1c17310	SSF56784	HAD-like
CNE_1c17320	SSF51182	RmlC-like cupins
CNE_1c17330	SSF51905	FAD/NAD(P)-binding domain
CNE_1c17340	SSF51905	FAD/NAD(P)-binding domain
CNE_1c17350	SSF54292	2Fe-2S ferredoxin-like
CNE_1c17360	SSF53383	PLP-dependent transferases
CNE_1c17370	SSF55729	Acyl-CoA N-acyltransferases (Nat)
CNE_1c17380	SSF53850	Periplasmic binding protein-like II
CNE_1c17390	SSF53850	Periplasmic binding protein-like II
CNE_1c17400	SSF53383	PLP-dependent transferases
CNE_1c17410	SSF46548	alpha-helical ferredoxin
CNE_1c17410	SSF55103	FAD-linked oxidases, C-terminal domain
CNE_1c17410	SSF56176	FAD-binding/transporter-associated domain-like
CNE_1c17420	SSF53720	ALDH-like
CNE_1c17430	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CNE_1c17440	SSF161098	MetI-like
CNE_1c17450	SSF161098	MetI-like
CNE_1c17460	SSF55729	Acyl-CoA N-acyltransferases (Nat)
CNE_1c17470	SSF51735	NAD(P)-binding Rossmann-fold domains
CNE_1c17470	SSF52283	Formate/glycerate dehydrogenase catalytic domain-like
CNE_1c17480	SSF46785	"Winged helix" DNA-binding domain
CNE_1c17480	SSF54909	Dimeric alpha+beta barrel
CNE_1c17490	SSF46689	Homeodomain-like
CNE_1c17500	SSF53822	Periplasmic binding protein-like I
CNE_1c17510	SSF103473	MFS general substrate transporter
CNE_1c17520	SSF46689	Homeodomain-like
CNE_1c17530	SSF50022	ISP domain
CNE_1c17530	SSF55961	Bet v1-like
CNE_1c17550	SSF51182	RmlC-like cupins
CNE_1c17560	SSF51182	RmlC-like cupins
CNE_1c17570	SSF51905	FAD/NAD(P)-binding domain
CNE_1c17570	SSF55424	FAD/NAD-linked reductases, dimerisation (C-terminal) domain
CNE_1c17580	SSF54427	NTF2-like
CNE_1c17590	SSF50022	ISP domain
CNE_1c17600	SSF53774	Glutaminase/Asparaginase
CNE_1c17610	SSF49482	Aromatic compound dioxygenase
CNE_1c17620	SSF56935	Porins
CNE_1c17630	SSF47616	GST C-terminal domain-like
CNE_1c17630	SSF52833	Thioredoxin-like
CNE_1c17650	SSF46785	"Winged helix" DNA-binding domain
CNE_1c17650	SSF53850	Periplasmic binding protein-like II
CNE_1c17660	SSF103473	MFS general substrate transporter
CNE_1c17670	SSF53187	Zn-dependent exopeptidases
CNE_1c17670	SSF55031	Bacterial exopeptidase dimerisation domain
CNE_1c17680	SSF53187	Zn-dependent exopeptidases
CNE_1c17680	SSF55031	Bacterial exopeptidase dimerisation domain
CNE_1c17690	SSF54909	Dimeric alpha+beta barrel
CNE_1c17700	SSF56935	Porins
CNE_1c17710	SSF53187	Zn-dependent exopeptidases
CNE_1c17710	SSF55031	Bacterial exopeptidase dimerisation domain
CNE_1c17720	SSF52343	Ferredoxin reductase-like, C-terminal NADP-linked domain
CNE_1c17720	SSF63380	Riboflavin synthase domain-like
CNE_1c17730	SSF51395	FMN-linked oxidoreductases
CNE_1c17740	SSF54909	Dimeric alpha+beta barrel
CNE_1c17760	SSF46785	"Winged helix" DNA-binding domain
CNE_1c17770	SSF75304	Amidase signature (AS) enzymes
CNE_1c17780	SSF53187	Zn-dependent exopeptidases
CNE_1c17790	SSF52343	Ferredoxin reductase-like, C-terminal NADP-linked domain
CNE_1c17790	SSF54292	2Fe-2S ferredoxin-like
CNE_1c17790	SSF63380	Riboflavin synthase domain-like
CNE_1c17800	SSF50022	ISP domain
CNE_1c17800	SSF55961	Bet v1-like
CNE_1c17810	SSF56935	Porins
CNE_1c17820	SSF50129	GroES-like
CNE_1c17820	SSF51735	NAD(P)-binding Rossmann-fold domains
CNE_1c17830	SSF51182	RmlC-like cupins
CNE_1c17840	SSF47188	Hemerythrin-like
CNE_1c17850	SSF53213	LigB-like
CNE_1c17860	SSF56529	FAH
CNE_1c17870	SSF51735	NAD(P)-binding Rossmann-fold domains
CNE_1c17870	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
CNE_1c17880	SSF51569	Aldolase
CNE_1c17880	SSF89000	post-HMGL domain-like
CNE_1c17890	SSF53474	alpha/beta-Hydrolases
CNE_1c17900	SSF51735	NAD(P)-binding Rossmann-fold domains
CNE_1c17910	SSF53383	PLP-dependent transferases
CNE_1c17930	SSF103473	MFS general substrate transporter
CNE_1c17940	SSF52096	ClpP/crotonase
CNE_1c17950	SSF89796	CoA-transferase family III (CaiB/BaiF)
CNE_1c17960	SSF53649	Alkaline phosphatase-like
CNE_1c17970	SSF53720	ALDH-like
CNE_1c17980	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
CNE_1c17980	SSF51735	NAD(P)-binding Rossmann-fold domains
CNE_1c17990	SSF53850	Periplasmic binding protein-like II
CNE_1c18000	SSF51182	RmlC-like cupins
CNE_1c18010	SSF46785	"Winged helix" DNA-binding domain
CNE_1c18010	SSF48008	GntR ligand-binding domain-like
CNE_1c18020	SSF53639	AraD/HMP-PK domain-like
CNE_1c18030	SSF53850	Periplasmic binding protein-like II
CNE_1c18040	SSF75304	Amidase signature (AS) enzymes
CNE_1c18050	SSF46785	"Winged helix" DNA-binding domain
CNE_1c18050	SSF53850	Periplasmic binding protein-like II
CNE_1c18060	SSF51905	FAD/NAD(P)-binding domain
CNE_1c18070	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CNE_1c18080	SSF161098	MetI-like
CNE_1c18090	SSF53850	Periplasmic binding protein-like II
CNE_1c18100	SSF46785	"Winged helix" DNA-binding domain
CNE_1c18100	SSF55781	GAF domain-like
CNE_1c18110	SSF48452	TPR-like
CNE_1c18110	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CNE_1c18110	SSF55073	Nucleotide cyclase
CNE_1c18120	SSF47413	lambda repressor-like DNA-binding domains
CNE_1c18130	SSF55469	FMN-dependent nitroreductase-like
CNE_1c18140	SSF56349	DNA breaking-rejoining enzymes
CNE_1c18160	SSF81273	H-NS histone-like proteins
CNE_1c18180	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
CNE_1c18180	SSF88946	Sigma2 domain of RNA polymerase sigma factors
CNE_1c18210	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
CNE_1c18230	SSF54292	2Fe-2S ferredoxin-like
CNE_1c18230	SSF55073	Nucleotide cyclase
CNE_1c18230	SSF81343	Fumarate reductase respiratory complex transmembrane subunits
CNE_1c18240	SSF56300	Metallo-dependent phosphatases
CNE_1c18250	SSF49503	Cupredoxins
CNE_1c18280	SSF116726	TrkA C-terminal domain-like
CNE_1c18290	SSF51735	NAD(P)-binding Rossmann-fold domains
CNE_1c18310	SSF50129	GroES-like
CNE_1c18310	SSF51735	NAD(P)-binding Rossmann-fold domains
CNE_1c18320	SSF51197	Clavaminate synthase-like
CNE_1c18330	SSF56801	Acetyl-CoA synthetase-like
CNE_1c18340	SSF53850	Periplasmic binding protein-like II
CNE_1c18350	SSF52833	Thioredoxin-like
CNE_1c18380	SSF46689	Homeodomain-like
CNE_1c18390	SSF46689	Homeodomain-like
CNE_1c18400	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
CNE_1c18400	SSF56645	Acyl-CoA dehydrogenase NM domain-like
CNE_1c18410	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
CNE_1c18420	SSF53474	alpha/beta-Hydrolases
CNE_1c18440	SSF53474	alpha/beta-Hydrolases
CNE_1c18450	SSF56935	Porins
CNE_1c18460	SSF53474	alpha/beta-Hydrolases
CNE_1c18470	SSF103473	MFS general substrate transporter
CNE_1c18480	SSF55729	Acyl-CoA N-acyltransferases (Nat)
CNE_1c18490	SSF69572	Activating enzymes of the ubiquitin-like proteins
CNE_1c18510	SSF55729	Acyl-CoA N-acyltransferases (Nat)
CNE_1c18520	SSF55469	FMN-dependent nitroreductase-like
CNE_1c18530	SSF102198	Putative cyclase
CNE_1c18540	SSF46626	Cytochrome c
CNE_1c18550	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
CNE_1c18630	SSF141868	EAL domain-like
CNE_1c18640	SSF75304	Amidase signature (AS) enzymes
CNE_1c18660	SSF46626	Cytochrome c
CNE_1c18660	SSF50998	Quinoprotein alcohol dehydrogenase-like
CNE_1c18670	SSF52096	ClpP/crotonase
CNE_1c18680	SSF46785	"Winged helix" DNA-binding domain
CNE_1c18680	SSF55781	GAF domain-like
CNE_1c18690	SSF53901	Thiolase-like
CNE_1c18700	SSF51735	NAD(P)-binding Rossmann-fold domains
CNE_1c18710	SSF52096	ClpP/crotonase
CNE_1c18720	SSF53850	Periplasmic binding protein-like II
CNE_1c18730	SSF103473	MFS general substrate transporter
CNE_1c18740	SSF51246	Rudiment single hybrid motif
CNE_1c18740	SSF52440	PreATP-grasp domain
CNE_1c18740	SSF56059	Glutathione synthetase ATP-binding domain-like
CNE_1c18750	SSF50182	Sm-like ribonucleoproteins
CNE_1c18760	SSF103481	Multidrug resistance efflux transporter EmrE
CNE_1c18770	SSF46785	"Winged helix" DNA-binding domain
CNE_1c18770	SSF53850	Periplasmic binding protein-like II
CNE_1c18780	SSF109604	HD-domain/PDEase-like
CNE_1c18800	SSF54909	Dimeric alpha+beta barrel
CNE_1c18810	SSF53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes
CNE_1c18820	SSF159800	PrpR receptor domain-like
CNE_1c18820	SSF46689	Homeodomain-like
CNE_1c18820	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CNE_1c18820	SSF55785	PYP-like sensor domain (PAS domain)
CNE_1c18840	SSF51621	Phosphoenolpyruvate/pyruvate domain
CNE_1c18850	SSF48256	Citrate synthase
CNE_1c18860	SSF52016	LeuD/IlvD-like
CNE_1c18860	SSF53732	Aconitase iron-sulfur domain
CNE_1c18870	SSF54506	Diaminopimelate epimerase-like
CNE_1c18880	SSF103378	2-methylcitrate dehydratase PrpD
CNE_1c18890	SSF53774	Glutaminase/Asparaginase
CNE_1c18900	SSF46689	Homeodomain-like
CNE_1c18910	SSF161111	Cation efflux protein transmembrane domain-like
CNE_1c18920	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
CNE_1c18940	SSF50800	PK beta-barrel domain-like
CNE_1c18950	SSF52317	Class I glutamine amidotransferase-like
CNE_1c18960	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
CNE_1c18970	SSF53720	ALDH-like
CNE_1c18990	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CNE_1c19000	SSF141986	LD-carboxypeptidase A C-terminal domain-like
CNE_1c19000	SSF52317	Class I glutamine amidotransferase-like
CNE_1c19010	SSF53927	Cytidine deaminase-like
CNE_1c19020	SSF55620	Tetrahydrobiopterin biosynthesis enzymes-like
CNE_1c19030	SSF102114	Radical SAM enzymes
CNE_1c19050	SSF103473	MFS general substrate transporter
CNE_1c19060	SSF51430	NAD(P)-linked oxidoreductase
CNE_1c19090	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
CNE_1c19090	SSF88946	Sigma2 domain of RNA polymerase sigma factors
CNE_1c19100	SSF109854	DinB/YfiT-like putative metalloenzymes
CNE_1c19110	SSF46785	"Winged helix" DNA-binding domain
CNE_1c19110	SSF53850	Periplasmic binding protein-like II
CNE_1c19140	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CNE_1c19150	SSF56300	Metallo-dependent phosphatases
CNE_1c19190	SSF51703	Cobalamin (vitamin B12)-dependent enzymes
CNE_1c19190	SSF52242	Cobalamin (vitamin B12)-binding domain
CNE_1c19210	SSF51905	FAD/NAD(P)-binding domain
CNE_1c19230	SSF55326	PurM N-terminal domain-like
CNE_1c19230	SSF56042	PurM C-terminal domain-like
CNE_1c19240	SSF55729	Acyl-CoA N-acyltransferases (Nat)
CNE_1c19250	SSF102114	Radical SAM enzymes
CNE_1c19260	SSF56317	Carbon-nitrogen hydrolase
CNE_1c19270	SSF75169	DsrEFH-like
CNE_1c19280	SSF46785	"Winged helix" DNA-binding domain
CNE_1c19280	SSF53383	PLP-dependent transferases
CNE_1c19290	SSF53474	alpha/beta-Hydrolases
CNE_1c19300	SSF51735	NAD(P)-binding Rossmann-fold domains
CNE_1c19310	SSF52343	Ferredoxin reductase-like, C-terminal NADP-linked domain
CNE_1c19310	SSF54292	2Fe-2S ferredoxin-like
CNE_1c19310	SSF63380	Riboflavin synthase domain-like
CNE_1c19320	SSF54427	NTF2-like
CNE_1c19330	SSF50022	ISP domain
CNE_1c19330	SSF55961	Bet v1-like
CNE_1c19340	SSF49482	Aromatic compound dioxygenase
CNE_1c19350	SSF46785	"Winged helix" DNA-binding domain
CNE_1c19350	SSF53850	Periplasmic binding protein-like II
CNE_1c19360	SSF51604	Enolase C-terminal domain-like
CNE_1c19360	SSF54826	Enolase N-terminal domain-like
CNE_1c19370	SSF54909	Dimeric alpha+beta barrel
CNE_1c19380	SSF53474	alpha/beta-Hydrolases
CNE_1c19400	SSF46689	Homeodomain-like
CNE_1c19400	SSF48498	Tetracyclin repressor-like, C-terminal domain
CNE_1c19410	SSF56801	Acetyl-CoA synthetase-like
CNE_1c19420	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
CNE_1c19420	SSF56645	Acyl-CoA dehydrogenase NM domain-like
CNE_1c19430	SSF52096	ClpP/crotonase
CNE_1c19440	SSF51230	Single hybrid motif
CNE_1c19440	SSF51246	Rudiment single hybrid motif
CNE_1c19440	SSF52440	PreATP-grasp domain
CNE_1c19440	SSF56059	Glutathione synthetase ATP-binding domain-like
CNE_1c19450	SSF51569	Aldolase
CNE_1c19460	SSF46689	Homeodomain-like
CNE_1c19460	SSF52317	Class I glutamine amidotransferase-like
CNE_1c19490	SSF51905	FAD/NAD(P)-binding domain
CNE_1c19510	SSF53383	PLP-dependent transferases
CNE_1c19520	SSF53383	PLP-dependent transferases
CNE_1c19530	SSF53850	Periplasmic binding protein-like II
CNE_1c19540	SSF161098	MetI-like
CNE_1c19550	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CNE_1c19560	SSF53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes
CNE_1c19590	SSF48557	L-aspartase-like
CNE_1c19620	SSF53850	Periplasmic binding protein-like II
CNE_1c19630	SSF52821	Rhodanese/Cell cycle control phosphatase
CNE_1c19650	SSF52821	Rhodanese/Cell cycle control phosphatase
CNE_1c19660	SSF52317	Class I glutamine amidotransferase-like
CNE_1c19660	SSF52402	Adenine nucleotide alpha hydrolases-like
CNE_1c19660	SSF54810	GMP synthetase C-terminal dimerisation domain
CNE_1c19680	SSF51412	Inosine monophosphate dehydrogenase (IMPDH)
CNE_1c19680	SSF54631	CBS-domain pair
CNE_1c19690	SSF103481	Multidrug resistance efflux transporter EmrE
CNE_1c19710	SSF54285	MoaD/ThiS
CNE_1c19720	SSF55961	Bet v1-like
CNE_1c19730	SSF74982	Small protein B (SmpB)
CNE_1c19740	SSF117892	Band 7/SPFH domain
CNE_1c19760	SSF51621	Phosphoenolpyruvate/pyruvate domain
CNE_1c19760	SSF52009	Phosphohistidine domain
CNE_1c19760	SSF56059	Glutathione synthetase ATP-binding domain-like
CNE_1c19780	SSF55315	L30e-like
CNE_1c19780	SSF75217	alpha/beta knot
CNE_1c19790	SSF53098	Ribonuclease H-like
CNE_1c19800	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
CNE_1c19810	SSF51161	Trimeric LpxA-like enzymes
CNE_1c19820	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
CNE_1c19830	SSF51161	Trimeric LpxA-like enzymes
CNE_1c19840	SSF111384	OmpH-like
CNE_1c19860	SSF50156	PDZ domain-like
CNE_1c19870	SSF51735	NAD(P)-binding Rossmann-fold domains
CNE_1c19870	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
CNE_1c19870	SSF69055	1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain
CNE_1c19890	SSF64005	Undecaprenyl diphosphate synthase
CNE_1c19900	SSF55194	Ribosome recycling factor, RRF
CNE_1c19910	SSF53633	Carbamate kinase-like
CNE_1c19920	SSF46934	UBA-like
CNE_1c19920	SSF54713	Elongation factor Ts (EF-Ts), dimerisation domain
CNE_1c19930	SSF52313	Ribosomal protein S2
CNE_1c19940	SSF55920	Creatinase/aminopeptidase
CNE_1c19950	SSF109604	HD-domain/PDEase-like
CNE_1c19950	SSF55021	ACT-like
CNE_1c19950	SSF81301	Nucleotidyltransferase
CNE_1c19950	SSF81593	Nucleotidyltransferase substrate binding subunit/domain
CNE_1c19960	SSF55120	Pseudouridine synthase
CNE_1c19960	SSF55174	Alpha-L RNA-binding motif
CNE_1c19970	SSF56420	Peptide deformylase
CNE_1c19980	SSF47781	RuvA domain 2-like
CNE_1c19980	SSF50249	Nucleic acid-binding proteins
CNE_1c19980	SSF52113	BRCT domain
CNE_1c19980	SSF56091	DNA ligase/mRNA capping enzyme, catalytic domain
CNE_1c19990	SSF64383	Cell-division protein ZipA, C-terminal domain
CNE_1c20000	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CNE_1c20000	SSF75553	Smc hinge domain
CNE_1c20010	SSF47240	Ferritin-like
CNE_1c20020	SSF103481	Multidrug resistance efflux transporter EmrE
CNE_1c20030	SSF53383	PLP-dependent transferases
CNE_1c20040	SSF51161	Trimeric LpxA-like enzymes
CNE_1c20060	SSF52833	Thioredoxin-like
CNE_1c20070	SSF53187	Zn-dependent exopeptidases
CNE_1c20070	SSF55031	Bacterial exopeptidase dimerisation domain
CNE_1c20080	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
CNE_1c20100	SSF103473	MFS general substrate transporter
CNE_1c20120	SSF47413	lambda repressor-like DNA-binding domains
CNE_1c20130	SSF53850	Periplasmic binding protein-like II
CNE_1c20140	SSF56801	Acetyl-CoA synthetase-like
CNE_1c20160	SSF89796	CoA-transferase family III (CaiB/BaiF)
CNE_1c20170	SSF50129	GroES-like
CNE_1c20170	SSF51735	NAD(P)-binding Rossmann-fold domains
CNE_1c20180	SSF53850	Periplasmic binding protein-like II
CNE_1c20190	SSF46785	"Winged helix" DNA-binding domain
CNE_1c20190	SSF53850	Periplasmic binding protein-like II
CNE_1c20210	SSF69593	Glycerol-3-phosphate (1)-acyltransferase
CNE_1c20230	SSF52799	(Phosphotyrosine protein) phosphatases II
CNE_1c20240	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
CNE_1c20240	SSF53474	alpha/beta-Hydrolases
CNE_1c20260	SSF53187	Zn-dependent exopeptidases
CNE_1c20280	SSF63992	Dipeptide transport protein
CNE_1c20290	SSF56266	DmpA/ArgJ-like
CNE_1c20300	SSF161098	MetI-like
CNE_1c20310	SSF161098	MetI-like
CNE_1c20320	SSF53850	Periplasmic binding protein-like II
CNE_1c20330	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CNE_1c20340	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
CNE_1c20350	SSF46689	Homeodomain-like
CNE_1c20350	SSF53697	SIS domain
CNE_1c20360	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CNE_1c20370	SSF158442	DsbB-like
CNE_1c20380	SSF55729	Acyl-CoA N-acyltransferases (Nat)
CNE_1c20390	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CNE_1c20390	SSF54211	Ribosomal protein S5 domain 2-like
CNE_1c20400	SSF50621	Alanine racemase C-terminal domain-like
CNE_1c20400	SSF51419	PLP-binding barrel
CNE_1c20410	SSF103473	MFS general substrate transporter
CNE_1c20430	SSF52141	Uracil-DNA glycosylase-like
CNE_1c20440	SSF55729	Acyl-CoA N-acyltransferases (Nat)
CNE_1c20450	SSF53067	Actin-like ATPase domain
CNE_1c20460	SSF47027	Acyl-CoA binding protein
CNE_1c20470	SSF103473	MFS general substrate transporter
CNE_1c20480	SSF55961	Bet v1-like
CNE_1c20490	SSF52266	SGNH hydrolase
CNE_1c20500	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
CNE_1c20510	SSF89447	AbrB/MazE/MraZ-like
CNE_1c20520	SSF50118	Cell growth inhibitor/plasmid maintenance toxic component
CNE_1c20530	SSF53850	Periplasmic binding protein-like II
CNE_1c20550	SSF53850	Periplasmic binding protein-like II
CNE_1c20560	SSF46785	"Winged helix" DNA-binding domain
CNE_1c20560	SSF53850	Periplasmic binding protein-like II
CNE_1c20580	SSF56601	beta-lactamase/transpeptidase-like
CNE_1c20590	SSF46626	Cytochrome c
CNE_1c20600	SSF51604	Enolase C-terminal domain-like
CNE_1c20610	SSF51604	Enolase C-terminal domain-like
CNE_1c20610	SSF54826	Enolase N-terminal domain-like
CNE_1c20620	SSF53850	Periplasmic binding protein-like II
CNE_1c20630	SSF51604	Enolase C-terminal domain-like
CNE_1c20630	SSF54826	Enolase N-terminal domain-like
CNE_1c20640	SSF50800	PK beta-barrel domain-like
CNE_1c20640	SSF51621	Phosphoenolpyruvate/pyruvate domain
CNE_1c20640	SSF52935	PK C-terminal domain-like
CNE_1c20650	SSF82544	GckA/TtuD-like
CNE_1c20660	SSF118215	Proton glutamate symport protein
CNE_1c20670	SSF53659	Isocitrate/Isopropylmalate dehydrogenase-like
CNE_1c20680	SSF46785	"Winged helix" DNA-binding domain
CNE_1c20680	SSF53850	Periplasmic binding protein-like II
CNE_1c20690	SSF46894	C-terminal effector domain of the bipartite response regulators
CNE_1c20690	SSF52172	CheY-like
CNE_1c20700	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
CNE_1c20710	SSF109604	HD-domain/PDEase-like
CNE_1c20710	SSF55781	GAF domain-like
CNE_1c20740	SSF51735	NAD(P)-binding Rossmann-fold domains
CNE_1c20740	SSF56327	LDH C-terminal domain-like
CNE_1c20780	SSF111369	HlyD-like secretion proteins
CNE_1c20800	SSF56954	Outer membrane efflux proteins (OEP)
CNE_1c20810	SSF47240	Ferritin-like
CNE_1c20820	SSF52402	Adenine nucleotide alpha hydrolases-like
CNE_1c20830	SSF46785	"Winged helix" DNA-binding domain
CNE_1c20830	SSF53850	Periplasmic binding protein-like II
CNE_1c20840	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CNE_1c20840	SSF90123	ABC transporter transmembrane region
CNE_1c20850	SSF143865	CorA soluble domain-like
CNE_1c20850	SSF144083	Magnesium transport protein CorA, transmembrane region
CNE_1c20860	SSF54427	NTF2-like
CNE_1c20870	SSF51735	NAD(P)-binding Rossmann-fold domains
CNE_1c20890	SSF56784	HAD-like
CNE_1c20890	SSF81653	Calcium ATPase, transduction domain A
CNE_1c20890	SSF81665	Calcium ATPase, transmembrane domain M
CNE_1c20920	SSF54909	Dimeric alpha+beta barrel
CNE_1c20930	SSF46785	"Winged helix" DNA-binding domain
CNE_1c20950	SSF52788	Phosphotyrosine protein phosphatases I
CNE_1c20960	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
CNE_1c20970	SSF46785	"Winged helix" DNA-binding domain
CNE_1c20990	SSF53649	Alkaline phosphatase-like
CNE_1c21000	SSF53649	Alkaline phosphatase-like
CNE_1c21020	SSF56954	Outer membrane efflux proteins (OEP)
CNE_1c21030	SSF111369	HlyD-like secretion proteins
CNE_1c21040	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
CNE_1c21040	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
CNE_1c21040	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
CNE_1c21070	SSF51395	FMN-linked oxidoreductases
CNE_1c21080	SSF52499	Isochorismatase-like hydrolases
CNE_1c21130	SSF50104	Translation proteins SH3-like domain
CNE_1c21130	SSF50249	Nucleic acid-binding proteins
CNE_1c21140	SSF52402	Adenine nucleotide alpha hydrolases-like
CNE_1c21150	SSF51621	Phosphoenolpyruvate/pyruvate domain
CNE_1c21160	SSF46689	Homeodomain-like
CNE_1c21170	SSF53474	alpha/beta-Hydrolases
CNE_1c21180	SSF52499	Isochorismatase-like hydrolases
CNE_1c21200	SSF53474	alpha/beta-Hydrolases
CNE_1c21230	SSF46785	"Winged helix" DNA-binding domain
CNE_1c21230	SSF53850	Periplasmic binding protein-like II
CNE_1c21240	SSF53187	Zn-dependent exopeptidases
CNE_1c21240	SSF55031	Bacterial exopeptidase dimerisation domain
CNE_1c21250	SSF53850	Periplasmic binding protein-like II
CNE_1c21260	SSF51645	Malate synthase G
CNE_1c21270	SSF56784	HAD-like
CNE_1c21280	SSF46785	"Winged helix" DNA-binding domain
CNE_1c21280	SSF53850	Periplasmic binding protein-like II
CNE_1c21290	SSF52402	Adenine nucleotide alpha hydrolases-like
CNE_1c21320	SSF51621	Phosphoenolpyruvate/pyruvate domain
CNE_1c21330	SSF53474	alpha/beta-Hydrolases
CNE_1c21340	SSF110857	Gamma-glutamyl cyclotransferase-like
CNE_1c21350	SSF89562	RraA-like
CNE_1c21360	SSF52467	DHS-like NAD/FAD-binding domain
CNE_1c21360	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
CNE_1c21370	SSF103473	MFS general substrate transporter
CNE_1c21380	SSF52172	CheY-like
CNE_1c21390	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
CNE_1c21410	SSF46785	"Winged helix" DNA-binding domain
CNE_1c21410	SSF53850	Periplasmic binding protein-like II
CNE_1c21420	SSF50331	MOP-like
CNE_1c21420	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CNE_1c21430	SSF161098	MetI-like
CNE_1c21440	SSF161098	MetI-like
CNE_1c21450	SSF53474	alpha/beta-Hydrolases
CNE_1c21460	SSF141868	EAL domain-like
CNE_1c21470	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CNE_1c21480	SSF161098	MetI-like
CNE_1c21490	SSF51679	Bacterial luciferase-like
CNE_1c21500	SSF53850	Periplasmic binding protein-like II
CNE_1c21510	SSF52218	Flavoproteins
CNE_1c21520	SSF53850	Periplasmic binding protein-like II
CNE_1c21530	SSF47240	Ferritin-like
CNE_1c21540	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CNE_1c21540	SSF81923	Double Clp-N motif
CNE_1c21550	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
CNE_1c21570	SSF56801	Acetyl-CoA synthetase-like
CNE_1c21600	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CNE_1c21610	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CNE_1c21620	SSF53822	Periplasmic binding protein-like I
CNE_1c21630	SSF52096	ClpP/crotonase
CNE_1c21640	SSF46689	Homeodomain-like
CNE_1c21640	SSF48498	Tetracyclin repressor-like, C-terminal domain
CNE_1c21650	SSF53474	alpha/beta-Hydrolases
CNE_1c21670	SSF54690	Molybdopterin synthase subunit MoaE
CNE_1c21680	SSF54285	MoaD/ThiS
CNE_1c21690	SSF53218	Molybdenum cofactor biosynthesis proteins
CNE_1c21690	SSF63867	MoeA C-terminal domain-like
CNE_1c21690	SSF63882	MoeA N-terminal region -like
CNE_1c21700	SSF53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes
CNE_1c21710	SSF51735	NAD(P)-binding Rossmann-fold domains
CNE_1c21710	SSF55021	ACT-like
CNE_1c21710	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
CNE_1c21720	SSF53383	PLP-dependent transferases
CNE_1c21730	SSF64076	MTH938-like
CNE_1c21740	SSF52833	Thioredoxin-like
CNE_1c21750	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CNE_1c21750	SSF88723	PIN domain-like
CNE_1c21770	SSF54001	Cysteine proteinases
CNE_1c21790	SSF109755	PhoU-like
CNE_1c21800	SSF48024	N-terminal domain of DnaB helicase
CNE_1c21800	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CNE_1c21810	SSF55653	Ribosomal protein L9 C-domain
CNE_1c21810	SSF55658	L9 N-domain-like
CNE_1c21820	SSF46911	Ribosomal protein S18
CNE_1c21830	SSF50249	Nucleic acid-binding proteins
CNE_1c21840	SSF54995	Ribosomal protein S6
CNE_1c21850	SSF53774	Glutaminase/Asparaginase
CNE_1c21870	SSF46785	"Winged helix" DNA-binding domain
CNE_1c21870	SSF51306	LexA/Signal peptidase
CNE_1c21930	SSF51395	FMN-linked oxidoreductases
CNE_1c21960	SSF52218	Flavoproteins
CNE_1c21970	SSF52096	ClpP/crotonase
CNE_1c21980	SSF47170	Aspartate receptor, ligand-binding domain
CNE_1c21980	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
CNE_1c22020	SSF103515	Autotransporter
CNE_1c22030	SSF50447	Translation proteins
CNE_1c22030	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CNE_1c22030	SSF54980	EF-G C-terminal domain-like
CNE_1c22040	SSF46785	"Winged helix" DNA-binding domain
CNE_1c22050	SSF56954	Outer membrane efflux proteins (OEP)
CNE_1c22060	SSF111369	HlyD-like secretion proteins
CNE_1c22070	SSF103473	MFS general substrate transporter
CNE_1c22080	SSF46785	"Winged helix" DNA-binding domain
CNE_1c22080	SSF55781	GAF domain-like
CNE_1c22090	SSF52317	Class I glutamine amidotransferase-like
CNE_1c22120	SSF53850	Periplasmic binding protein-like II
CNE_1c22130	SSF55120	Pseudouridine synthase
CNE_1c22130	SSF88697	PUA domain-like
CNE_1c22140	SSF89919	Ribosome-binding factor A, RbfA
CNE_1c22150	SSF46955	Putative DNA-binding domain
CNE_1c22150	SSF50447	Translation proteins
CNE_1c22150	SSF52156	Initiation factor IF2/eIF5b, domain 3
CNE_1c22150	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CNE_1c22160	SSF47794	Rad51 N-terminal domain-like
CNE_1c22160	SSF50249	Nucleic acid-binding proteins
CNE_1c22160	SSF54814	Prokaryotic type KH domain (KH-domain type II)
CNE_1c22160	SSF69705	Transcription factor NusA, N-terminal domain
CNE_1c22170	SSF74942	YhbC-like, C-terminal domain
CNE_1c22170	SSF75420	YhbC-like, N-terminal domain
CNE_1c22180	SSF55120	Pseudouridine synthase
CNE_1c22180	SSF55174	Alpha-L RNA-binding motif
CNE_1c22190	SSF46785	"Winged helix" DNA-binding domain
CNE_1c22220	SSF46785	"Winged helix" DNA-binding domain
CNE_1c22220	SSF51206	cAMP-binding domain-like
CNE_1c22250	SSF54862	4Fe-4S ferredoxins
CNE_1c22260	SSF46626	Cytochrome c
CNE_1c22280	SSF46626	Cytochrome c
CNE_1c22290	SSF81442	Cytochrome c oxidase subunit I-like
CNE_1c22310	SSF55008	HMA, heavy metal-associated domain
CNE_1c22310	SSF56784	HAD-like
CNE_1c22310	SSF81653	Calcium ATPase, transduction domain A
CNE_1c22310	SSF81665	Calcium ATPase, transmembrane domain M
CNE_1c22320	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CNE_1c22330	SSF51905	FAD/NAD(P)-binding domain
CNE_1c22330	SSF55424	FAD/NAD-linked reductases, dimerisation (C-terminal) domain
CNE_1c22340	SSF47005	Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex
CNE_1c22340	SSF51230	Single hybrid motif
CNE_1c22340	SSF52777	CoA-dependent acyltransferases
CNE_1c22350	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
CNE_1c22360	SSF51695	PLC-like phosphodiesterases
CNE_1c22370	SSF50331	MOP-like
CNE_1c22370	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CNE_1c22380	SSF161098	MetI-like
CNE_1c22390	SSF161098	MetI-like
CNE_1c22400	SSF53850	Periplasmic binding protein-like II
CNE_1c22410	SSF56784	HAD-like
CNE_1c22420	SSF46689	Homeodomain-like
CNE_1c22420	SSF52172	CheY-like
CNE_1c22420	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CNE_1c22430	SSF47384	Homodimeric domain of signal transducing histidine kinase
CNE_1c22430	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
CNE_1c22450	SSF54368	Glutamine synthetase, N-terminal domain
CNE_1c22450	SSF55931	Glutamine synthetase/guanido kinase
CNE_1c22460	SSF52821	Rhodanese/Cell cycle control phosphatase
CNE_1c22470	SSF53218	Molybdenum cofactor biosynthesis proteins
CNE_1c22500	SSF88713	Glycoside hydrolase/deacetylase
CNE_1c22510	SSF50974	Nitrous oxide reductase, N-terminal domain
CNE_1c22520	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CNE_1c22530	SSF53633	Carbamate kinase-like
CNE_1c22530	SSF55729	Acyl-CoA N-acyltransferases (Nat)
CNE_1c22540	SSF111148	YggX-like
CNE_1c22550	SSF100950	NagB/RpiA/CoA transferase-like
CNE_1c22550	SSF75445	D-ribose-5-phosphate isomerase (RpiA), lid domain
CNE_1c22560	SSF51569	Aldolase
CNE_1c22570	SSF52467	DHS-like NAD/FAD-binding domain
CNE_1c22580	SSF55315	L30e-like
CNE_1c22580	SSF75217	alpha/beta knot
CNE_1c22590	SSF50249	Nucleic acid-binding proteins
CNE_1c22610	SSF46785	"Winged helix" DNA-binding domain
CNE_1c22620	SSF51735	NAD(P)-binding Rossmann-fold domains
CNE_1c22630	SSF53271	PRTase-like
CNE_1c22640	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CNE_1c22650	SSF55681	Class II aaRS and biotin synthetases
CNE_1c22660	SSF117892	Band 7/SPFH domain
CNE_1c22670	SSF117892	Band 7/SPFH domain
CNE_1c22680	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CNE_1c22690	SSF50182	Sm-like ribonucleoproteins
CNE_1c22700	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CNE_1c22710	SSF50998	Quinoprotein alcohol dehydrogenase-like
CNE_1c22730	SSF52954	Class II aaRS ABD-related
CNE_1c22730	SSF55681	Class II aaRS and biotin synthetases
CNE_1c22750	SSF47413	lambda repressor-like DNA-binding domains
CNE_1c22760	SSF48452	TPR-like
CNE_1c22770	SSF102114	Radical SAM enzymes
CNE_1c22780	SSF54919	Nucleoside diphosphate kinase, NDK
CNE_1c22800	SSF50249	Nucleic acid-binding proteins
CNE_1c22800	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
CNE_1c22810	SSF56219	DNase I-like
CNE_1c22820	SSF53098	Ribonuclease H-like
CNE_1c22830	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
CNE_1c22830	SSF88946	Sigma2 domain of RNA polymerase sigma factors
CNE_1c22840	SSF51261	Duplicated hybrid motif
CNE_1c22850	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
CNE_1c22860	SSF64167	SurE-like
CNE_1c22870	SSF50129	GroES-like
CNE_1c22870	SSF51735	NAD(P)-binding Rossmann-fold domains
CNE_1c22880	SSF56935	Porins
CNE_1c22890	SSF52172	CheY-like
CNE_1c22900	SSF47384	Homodimeric domain of signal transducing histidine kinase
CNE_1c22900	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
CNE_1c22910	SSF161098	MetI-like
CNE_1c22920	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CNE_1c22930	SSF53850	Periplasmic binding protein-like II
CNE_1c22940	SSF53850	Periplasmic binding protein-like II
CNE_1c22950	SSF51569	Aldolase
CNE_1c22960	SSF89796	CoA-transferase family III (CaiB/BaiF)
CNE_1c22970	SSF46785	"Winged helix" DNA-binding domain
CNE_1c22970	SSF53850	Periplasmic binding protein-like II
CNE_1c22980	SSF111304	Recombination protein RecR
CNE_1c22990	SSF82607	YbaB-like
CNE_1c23000	SSF48019	post-AAA+ oligomerization domain-like
CNE_1c23000	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CNE_1c23010	SSF51998	PFL-like glycyl radical enzymes
CNE_1c23020	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CNE_1c23020	SSF52980	Restriction endonuclease-like
CNE_1c23030	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CNE_1c23050	SSF52833	Thioredoxin-like
CNE_1c23060	SSF50249	Nucleic acid-binding proteins
CNE_1c23060	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CNE_1c23060	SSF68912	Rho N-terminal domain-like
CNE_1c23070	SSF55486	Metalloproteases ("zincins"), catalytic domain
CNE_1c23080	SSF143800	L28p-like
CNE_1c23170	SSF48163	An anticodon-binding domain of class I aminoacyl-tRNA synthetases
CNE_1c23170	SSF52374	Nucleotidylyl transferase
CNE_1c23180	SSF52151	FabD/lysophospholipase-like
CNE_1c23190	SSF54001	Cysteine proteinases
CNE_1c23200	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CNE_1c23210	SSF161098	MetI-like
CNE_1c23220	SSF161098	MetI-like
CNE_1c23230	SSF53850	Periplasmic binding protein-like II
CNE_1c23240	SSF51735	NAD(P)-binding Rossmann-fold domains
CNE_1c23250	SSF103473	MFS general substrate transporter
CNE_1c23280	SSF160272	Shew3726-like
CNE_1c23290	SSF47473	EF-hand
CNE_1c23300	SSF81324	Voltage-gated potassium channels
CNE_1c23320	SSF111369	HlyD-like secretion proteins
CNE_1c23330	SSF56954	Outer membrane efflux proteins (OEP)
CNE_1c23350	SSF52151	FabD/lysophospholipase-like
CNE_1c23370	SSF55073	Nucleotide cyclase
CNE_1c23400	SSF53098	Ribonuclease H-like
CNE_1c23420	SSF50249	Nucleic acid-binding proteins
CNE_1c23430	SSF53254	Phosphoglycerate mutase-like
CNE_1c23440	SSF55729	Acyl-CoA N-acyltransferases (Nat)
CNE_1c23450	SSF109604	HD-domain/PDEase-like
CNE_1c23450	SSF53067	Actin-like ATPase domain
CNE_1c23460	SSF140356	PPK N-terminal domain-like
CNE_1c23460	SSF143724	PHP14-like
CNE_1c23460	SSF56024	Phospholipase D/nuclease
CNE_1c23470	SSF47384	Homodimeric domain of signal transducing histidine kinase
CNE_1c23470	SSF55785	PYP-like sensor domain (PAS domain)
CNE_1c23470	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
CNE_1c23480	SSF46894	C-terminal effector domain of the bipartite response regulators
CNE_1c23480	SSF52172	CheY-like
CNE_1c23490	SSF109755	PhoU-like
CNE_1c23500	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CNE_1c23510	SSF161098	MetI-like
CNE_1c23520	SSF161098	MetI-like
CNE_1c23530	SSF53850	Periplasmic binding protein-like II
CNE_1c23540	SSF53738	Phosphoglucomutase, first 3 domains
CNE_1c23540	SSF55957	Phosphoglucomutase, C-terminal domain
CNE_1c23550	SSF51717	Dihydropteroate synthetase-like
CNE_1c23560	SSF140990	FtsH protease domain-like
CNE_1c23560	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CNE_1c23570	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
CNE_1c23580	SSF75471	YhbY-like
CNE_1c23600	SSF46557	GreA transcript cleavage protein, N-terminal domain
CNE_1c23600	SSF54534	FKBP-like
CNE_1c23610	SSF48108	Carbamoyl phosphate synthetase, large subunit connection domain
CNE_1c23610	SSF52335	Methylglyoxal synthase-like
CNE_1c23610	SSF52440	PreATP-grasp domain
CNE_1c23610	SSF56059	Glutathione synthetase ATP-binding domain-like
CNE_1c23630	SSF52021	Carbamoyl phosphate synthetase, small subunit N-terminal domain
CNE_1c23630	SSF52317	Class I glutamine amidotransferase-like
CNE_1c23640	SSF55298	YjgF-like
CNE_1c23650	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
CNE_1c23660	SSF56801	Acetyl-CoA synthetase-like
CNE_1c23670	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
CNE_1c23670	SSF56645	Acyl-CoA dehydrogenase NM domain-like
CNE_1c23680	SSF52096	ClpP/crotonase
CNE_1c23690	SSF51735	NAD(P)-binding Rossmann-fold domains
CNE_1c23700	SSF51395	FMN-linked oxidoreductases
CNE_1c23700	SSF51905	FAD/NAD(P)-binding domain
CNE_1c23710	SSF56801	Acetyl-CoA synthetase-like
CNE_1c23720	SSF53955	Lysozyme-like
CNE_1c23720	SSF54106	LysM domain
CNE_1c23730	SSF56281	Metallo-hydrolase/oxidoreductase
CNE_1c23740	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
CNE_1c23750	SSF53098	Ribonuclease H-like
CNE_1c23760	SSF53098	Ribonuclease H-like
CNE_1c23810	SSF52499	Isochorismatase-like hydrolases
CNE_1c23820	SSF55073	Nucleotide cyclase
CNE_1c23820	SSF55785	PYP-like sensor domain (PAS domain)
CNE_1c23830	SSF53850	Periplasmic binding protein-like II
CNE_1c23850	SSF161098	MetI-like
CNE_1c23860	SSF161098	MetI-like
CNE_1c23870	SSF50331	MOP-like
CNE_1c23870	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CNE_1c23880	SSF50331	MOP-like
CNE_1c23880	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CNE_1c23890	SSF100950	NagB/RpiA/CoA transferase-like
CNE_1c23890	SSF46785	"Winged helix" DNA-binding domain
CNE_1c23900	SSF53328	Formyltransferase
CNE_1c23900	SSF55021	ACT-like
CNE_1c23910	SSF55811	Nudix
CNE_1c23920	SSF53067	Actin-like ATPase domain
CNE_1c23930	SSF51905	FAD/NAD(P)-binding domain
CNE_1c23940	SSF141488	YdhA-like
CNE_1c24030	SSF55073	Nucleotide cyclase
CNE_1c24040	SSF103088	OmpA-like
CNE_1c24060	SSF56752	D-aminoacid aminotransferase-like PLP-dependent enzymes
CNE_1c24070	SSF55729	Acyl-CoA N-acyltransferases (Nat)
CNE_1c24100	SSF56801	Acetyl-CoA synthetase-like
CNE_1c24110	SSF103481	Multidrug resistance efflux transporter EmrE
CNE_1c24130	SSF117457	FumA C-terminal domain-like
CNE_1c24140	SSF53681	Aspartate/glutamate racemase
CNE_1c24150	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CNE_1c24160	SSF74653	TolA/TonB C-terminal domain
CNE_1c24200	SSF143744	GlcG-like
CNE_1c24250	SSF46785	"Winged helix" DNA-binding domain
CNE_1c24250	SSF53850	Periplasmic binding protein-like II
CNE_1c24310	SSF46600	C-terminal UvrC-binding domain of UvrB
CNE_1c24310	SSF47781	RuvA domain 2-like
CNE_1c24310	SSF82771	GIY-YIG endonuclease
CNE_1c24330	SSF50104	Translation proteins SH3-like domain
CNE_1c24330	SSF50249	Nucleic acid-binding proteins
CNE_1c24340	SSF51445	(Trans)glycosidases
CNE_1c24350	SSF56214	4'-phosphopantetheinyl transferase
CNE_1c24360	SSF63892	Pyridoxine 5'-phosphate synthase
CNE_1c24370	SSF50249	Nucleic acid-binding proteins
CNE_1c24370	SSF57863	ArfGap/RecO-like zinc finger
CNE_1c24380	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CNE_1c24380	SSF54814	Prokaryotic type KH domain (KH-domain type II)
CNE_1c24390	SSF54768	dsRNA-binding domain-like
CNE_1c24390	SSF69065	RNase III domain-like
CNE_1c24410	SSF51306	LexA/Signal peptidase
CNE_1c24420	SSF50447	Translation proteins
CNE_1c24420	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CNE_1c24420	SSF54980	EF-G C-terminal domain-like
CNE_1c24430	SSF52833	Thioredoxin-like
CNE_1c24440	SSF50156	PDZ domain-like
CNE_1c24440	SSF50494	Trypsin-like serine proteases
CNE_1c24460	SSF89069	N-terminal, cytoplasmic domain of anti-sigmaE factor RseA
CNE_1c24470	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
CNE_1c24470	SSF88946	Sigma2 domain of RNA polymerase sigma factors
CNE_1c24490	SSF53901	Thiolase-like
CNE_1c24500	SSF47336	ACP-like
CNE_1c24510	SSF51735	NAD(P)-binding Rossmann-fold domains
CNE_1c24520	SSF52151	FabD/lysophospholipase-like
CNE_1c24520	SSF55048	Probable ACP-binding domain of malonyl-CoA ACP transacylase
CNE_1c24530	SSF53901	Thiolase-like
CNE_1c24540	SSF53659	Isocitrate/Isopropylmalate dehydrogenase-like
CNE_1c24550	SSF57829	Zn-binding ribosomal proteins
CNE_1c24570	SSF52972	ITPase-like
CNE_1c24580	SSF53790	Tetrapyrrole methylase
CNE_1c24590	SSF52096	ClpP/crotonase
CNE_1c24600	SSF50022	ISP domain
CNE_1c24610	SSF56784	HAD-like
CNE_1c24620	SSF55120	Pseudouridine synthase
CNE_1c24620	SSF55174	Alpha-L RNA-binding motif
CNE_1c24630	SSF50249	Nucleic acid-binding proteins
CNE_1c24640	SSF102114	Radical SAM enzymes
CNE_1c24650	SSF53448	Nucleotide-diphospho-sugar transferases
CNE_1c24660	SSF53218	Molybdenum cofactor biosynthesis proteins
CNE_1c24660	SSF63867	MoeA C-terminal domain-like
CNE_1c24660	SSF63882	MoeA N-terminal region -like
CNE_1c24690	SSF51735	NAD(P)-binding Rossmann-fold domains
CNE_1c24690	SSF52283	Formate/glycerate dehydrogenase catalytic domain-like
CNE_1c24710	SSF100950	NagB/RpiA/CoA transferase-like
CNE_1c24720	SSF51690	Nicotinate/Quinolinate PRTase C-terminal domain-like
CNE_1c24720	SSF54675	Nicotinate/Quinolinate PRTase N-terminal domain-like
CNE_1c24740	SSF54862	4Fe-4S ferredoxins
CNE_1c24750	SSF51905	FAD/NAD(P)-binding domain
CNE_1c24770	SSF46785	"Winged helix" DNA-binding domain
CNE_1c24770	SSF55781	GAF domain-like
CNE_1c24780	SSF89796	CoA-transferase family III (CaiB/BaiF)
CNE_1c24790	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
CNE_1c24790	SSF56645	Acyl-CoA dehydrogenase NM domain-like
CNE_1c24800	SSF53850	Periplasmic binding protein-like II
CNE_1c24810	SSF51182	RmlC-like cupins
CNE_1c24820	SSF52172	CheY-like
CNE_1c24830	SSF47384	Homodimeric domain of signal transducing histidine kinase
CNE_1c24830	SSF55781	GAF domain-like
CNE_1c24830	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
CNE_1c24850	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CNE_1c24880	SSF53383	PLP-dependent transferases
CNE_1c24890	SSF53271	PRTase-like
CNE_1c24890	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
CNE_1c24910	SSF110997	Sporulation related repeat
CNE_1c24920	SSF53244	MurD-like peptide ligases, peptide-binding domain
CNE_1c24920	SSF53623	MurD-like peptide ligases, catalytic domain
CNE_1c24930	SSF52096	ClpP/crotonase
CNE_1c24940	SSF51366	Ribulose-phoshate binding barrel
CNE_1c24950	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
CNE_1c24960	SSF53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes
CNE_1c24970	SSF51366	Ribulose-phoshate binding barrel
CNE_1c24980	SSF55120	Pseudouridine synthase
CNE_1c25000	SSF51735	NAD(P)-binding Rossmann-fold domains
CNE_1c25000	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
CNE_1c25020	SSF53659	Isocitrate/Isopropylmalate dehydrogenase-like
CNE_1c25030	SSF52016	LeuD/IlvD-like
CNE_1c25040	SSF53732	Aconitase iron-sulfur domain
CNE_1c25050	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CNE_1c25060	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CNE_1c25090	SSF53822	Periplasmic binding protein-like I
CNE_1c25100	SSF48256	Citrate synthase
CNE_1c25110	SSF109910	YgfY-like
CNE_1c25120	SSF46548	alpha-helical ferredoxin
CNE_1c25120	SSF54292	2Fe-2S ferredoxin-like
CNE_1c25130	SSF46977	Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain
CNE_1c25130	SSF51905	FAD/NAD(P)-binding domain
CNE_1c25130	SSF56425	Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain
CNE_1c25140	SSF81343	Fumarate reductase respiratory complex transmembrane subunits
CNE_1c25150	SSF81343	Fumarate reductase respiratory complex transmembrane subunits
CNE_1c25160	SSF46785	"Winged helix" DNA-binding domain
CNE_1c25160	SSF64288	Chorismate lyase-like
CNE_1c25170	SSF51735	NAD(P)-binding Rossmann-fold domains
CNE_1c25170	SSF56327	LDH C-terminal domain-like
CNE_1c25180	SSF51621	Phosphoenolpyruvate/pyruvate domain
CNE_1c25190	SSF48256	Citrate synthase
CNE_1c25210	SSF52016	LeuD/IlvD-like
CNE_1c25210	SSF53732	Aconitase iron-sulfur domain
CNE_1c25240	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
CNE_1c25250	SSF53850	Periplasmic binding protein-like II
CNE_1c25260	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
CNE_1c25270	SSF48452	TPR-like
CNE_1c25280	SSF53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes
CNE_1c25290	SSF55594	HPr-like
CNE_1c25300	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
CNE_1c25330	SSF52402	Adenine nucleotide alpha hydrolases-like
CNE_1c25340	SSF53474	alpha/beta-Hydrolases
CNE_1c25350	SSF53850	Periplasmic binding protein-like II
CNE_1c25360	SSF53474	alpha/beta-Hydrolases
CNE_1c25410	SSF52141	Uracil-DNA glycosylase-like
CNE_1c25420	SSF110942	HSP90 C-terminal domain
CNE_1c25420	SSF54211	Ribosomal protein S5 domain 2-like
CNE_1c25420	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
CNE_1c25430	SSF46785	"Winged helix" DNA-binding domain
CNE_1c25430	SSF53383	PLP-dependent transferases
CNE_1c25450	SSF50447	Translation proteins
CNE_1c25450	SSF55186	ThrRS/AlaRS common domain
CNE_1c25470	SSF103481	Multidrug resistance efflux transporter EmrE
CNE_1c25480	SSF55298	YjgF-like
CNE_1c25490	SSF51182	RmlC-like cupins
CNE_1c25500	SSF53383	PLP-dependent transferases
CNE_1c25510	SSF47616	GST C-terminal domain-like
CNE_1c25510	SSF52833	Thioredoxin-like
CNE_1c25540	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CNE_1c25540	SSF90123	ABC transporter transmembrane region
CNE_1c25570	SSF101904	GyrA/ParC C-terminal domain-like
CNE_1c25570	SSF56719	Type II DNA topoisomerase
CNE_1c25580	SSF53955	Lysozyme-like
CNE_1c25590	SSF54211	Ribosomal protein S5 domain 2-like
CNE_1c25590	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
CNE_1c25590	SSF56719	Type II DNA topoisomerase
CNE_1c25600	SSF103473	MFS general substrate transporter
CNE_1c25610	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CNE_1c25640	SSF103481	Multidrug resistance efflux transporter EmrE
CNE_1c25680	SSF88713	Glycoside hydrolase/deacetylase
CNE_1c25690	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
CNE_1c25720	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
CNE_1c25780	SSF56349	DNA breaking-rejoining enzymes
CNE_1c25790	SSF56349	DNA breaking-rejoining enzymes
CNE_1c25850	SSF81606	PP2C-like
CNE_1c25860	SSF46689	Homeodomain-like
CNE_1c25860	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CNE_1c25870	SSF51206	cAMP-binding domain-like
CNE_1c25870	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CNE_1c25870	SSF90123	ABC transporter transmembrane region
CNE_1c25880	SSF109998	Triger factor/SurA peptide-binding domain-like
CNE_1c25880	SSF54534	FKBP-like
CNE_1c25900	SSF49879	SMAD/FHA domain
CNE_1c25910	SSF56954	Outer membrane efflux proteins (OEP)
CNE_1c25940	SSF56436	C-type lectin-like
CNE_1c25950	SSF56112	Protein kinase-like (PK-like)
CNE_1c25970	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CNE_1c25980	SSF56436	C-type lectin-like
CNE_1c25990	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
CNE_1c26010	SSF55831	Thymidylate synthase/dCMP hydroxymethylase
CNE_1c26020	SSF53597	Dihydrofolate reductase-like
CNE_1c26030	SSF111283	Putative modulator of DNA gyrase, PmbA/TldD
CNE_1c26040	SSF158710	PSPTO4464-like
CNE_1c26050	SSF53218	Molybdenum cofactor biosynthesis proteins
CNE_1c26070	SSF53098	Ribonuclease H-like
CNE_1c26090	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CNE_1c26120	SSF51182	RmlC-like cupins
CNE_1c26130	SSF46785	"Winged helix" DNA-binding domain
CNE_1c26130	SSF53850	Periplasmic binding protein-like II
CNE_1c26140	SSF52374	Nucleotidylyl transferase
CNE_1c26150	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CNE_1c26170	SSF100950	NagB/RpiA/CoA transferase-like
CNE_1c26180	SSF54909	Dimeric alpha+beta barrel
CNE_1c26220	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
CNE_1c26220	SSF88946	Sigma2 domain of RNA polymerase sigma factors
CNE_1c26230	SSF56731	DNA primase core
CNE_1c26230	SSF57783	Zinc beta-ribbon
CNE_1c26240	SSF89095	GatB/YqeY motif
CNE_1c26260	SSF160996	HI0933 insert domain-like
CNE_1c26260	SSF51905	FAD/NAD(P)-binding domain
CNE_1c26270	SSF53067	Actin-like ATPase domain
CNE_1c26290	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
CNE_1c26290	SSF52922	TK C-terminal domain-like
CNE_1c26300	SSF48576	Terpenoid synthases
CNE_1c26310	SSF116842	XseB-like
CNE_1c26320	SSF50022	ISP domain
CNE_1c26320	SSF55961	Bet v1-like
CNE_1c26330	SSF103481	Multidrug resistance efflux transporter EmrE
CNE_1c26340	SSF52821	Rhodanese/Cell cycle control phosphatase
CNE_1c26360	SSF53474	alpha/beta-Hydrolases
CNE_1c26370	SSF51905	FAD/NAD(P)-binding domain
CNE_1c26380	SSF47807	5' to 3' exonuclease, C-terminal subdomain
CNE_1c26380	SSF53098	Ribonuclease H-like
CNE_1c26380	SSF56672	DNA/RNA polymerases
CNE_1c26380	SSF88723	PIN domain-like
CNE_1c26390	SSF102405	MCP/YpsA-like
CNE_1c26410	SSF56112	Protein kinase-like (PK-like)
CNE_1c26430	SSF46785	"Winged helix" DNA-binding domain
CNE_1c26430	SSF55781	GAF domain-like
CNE_1c26440	SSF53720	ALDH-like
CNE_1c26450	SSF56801	Acetyl-CoA synthetase-like
CNE_1c26460	SSF103473	MFS general substrate transporter
CNE_1c26470	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CNE_1c26480	SSF46589	tRNA-binding arm
CNE_1c26480	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
CNE_1c26480	SSF50677	ValRS/IleRS/LeuRS editing domain
CNE_1c26480	SSF52374	Nucleotidylyl transferase
CNE_1c26490	SSF53448	Nucleotide-diphospho-sugar transferases
CNE_1c26500	SSF64307	SirA-like
CNE_1c26510	SSF55811	Nudix
CNE_1c26520	SSF53383	PLP-dependent transferases
CNE_1c26530	SSF55331	Tautomerase/MIF
CNE_1c26540	SSF53639	AraD/HMP-PK domain-like
CNE_1c26550	SSF103473	MFS general substrate transporter
CNE_1c26560	SSF46785	"Winged helix" DNA-binding domain
CNE_1c26560	SSF53850	Periplasmic binding protein-like II
CNE_1c26570	SSF141322	NfeD domain-like
CNE_1c26570	SSF52096	ClpP/crotonase
CNE_1c26580	SSF117892	Band 7/SPFH domain
CNE_1c26590	SSF101353	Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS)
CNE_1c26590	SSF50447	Translation proteins
CNE_1c26590	SSF55186	ThrRS/AlaRS common domain
CNE_1c26590	SSF55681	Class II aaRS and biotin synthetases
CNE_1c26600	SSF89796	CoA-transferase family III (CaiB/BaiF)
CNE_1c26620	SSF53850	Periplasmic binding protein-like II
CNE_1c26630	SSF56176	FAD-binding/transporter-associated domain-like
CNE_1c26660	SSF55826	YbaK/ProRS associated domain
CNE_1c26670	SSF48113	Heme-dependent peroxidases
CNE_1c26680	SSF46785	"Winged helix" DNA-binding domain
CNE_1c26680	SSF53850	Periplasmic binding protein-like II
CNE_1c26690	SSF53850	Periplasmic binding protein-like II
CNE_1c26700	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
CNE_1c26710	SSF54506	Diaminopimelate epimerase-like
CNE_1c26720	SSF50475	FMN-binding split barrel
CNE_1c26730	SSF89796	CoA-transferase family III (CaiB/BaiF)
CNE_1c26740	SSF50715	Ribosomal protein L25-like
CNE_1c26740	SSF52374	Nucleotidylyl transferase
CNE_1c26750	SSF55174	Alpha-L RNA-binding motif
CNE_1c26760	SSF161084	MAPEG domain-like
CNE_1c26770	SSF101874	YceI-like
CNE_1c26790	SSF52980	Restriction endonuclease-like
CNE_1c26800	SSF54534	FKBP-like
CNE_1c26820	SSF110857	Gamma-glutamyl cyclotransferase-like
CNE_1c26830	SSF48403	Ankyrin repeat
CNE_1c26840	SSF56801	Acetyl-CoA synthetase-like
CNE_1c26850	SSF48452	TPR-like
CNE_1c26850	SSF52833	Thioredoxin-like
CNE_1c26860	SSF51182	RmlC-like cupins
CNE_1c26870	SSF47188	Hemerythrin-like
CNE_1c26880	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CNE_1c26890	SSF69572	Activating enzymes of the ubiquitin-like proteins
CNE_1c26910	SSF103473	MFS general substrate transporter
CNE_1c26920	SSF50475	FMN-binding split barrel
CNE_1c26930	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
CNE_1c26940	SSF117396	TM1631-like
CNE_1c26950	SSF51735	NAD(P)-binding Rossmann-fold domains
CNE_1c26950	SSF52210	Succinyl-CoA synthetase domains
CNE_1c26950	SSF56059	Glutathione synthetase ATP-binding domain-like
CNE_1c26960	SSF53850	Periplasmic binding protein-like II
CNE_1c26970	SSF51735	NAD(P)-binding Rossmann-fold domains
CNE_1c26980	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
CNE_1c26980	SSF56645	Acyl-CoA dehydrogenase NM domain-like
CNE_1c26990	SSF53850	Periplasmic binding protein-like II
CNE_1c27010	SSF51230	Single hybrid motif
CNE_1c27010	SSF51246	Rudiment single hybrid motif
CNE_1c27010	SSF52440	PreATP-grasp domain
CNE_1c27010	SSF56059	Glutathione synthetase ATP-binding domain-like
CNE_1c27020	SSF52096	ClpP/crotonase
CNE_1c27030	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
CNE_1c27030	SSF56645	Acyl-CoA dehydrogenase NM domain-like
CNE_1c27040	SSF52096	ClpP/crotonase
CNE_1c27050	SSF46785	"Winged helix" DNA-binding domain
CNE_1c27050	SSF55781	GAF domain-like
CNE_1c27060	SSF55068	Peptide methionine sulfoxide reductase
CNE_1c27070	SSF56801	Acetyl-CoA synthetase-like
CNE_1c27080	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
CNE_1c27080	SSF56645	Acyl-CoA dehydrogenase NM domain-like
CNE_1c27090	SSF53474	alpha/beta-Hydrolases
CNE_1c27110	SSF50475	FMN-binding split barrel
CNE_1c27120	SSF46785	"Winged helix" DNA-binding domain
CNE_1c27130	SSF46785	"Winged helix" DNA-binding domain
CNE_1c27130	SSF54909	Dimeric alpha+beta barrel
CNE_1c27140	SSF102198	Putative cyclase
CNE_1c27150	SSF53383	PLP-dependent transferases
CNE_1c27160	SSF140959	Indolic compounds 2,3-dioxygenase-like
CNE_1c27170	SSF46785	"Winged helix" DNA-binding domain
CNE_1c27170	SSF55781	GAF domain-like
CNE_1c27180	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
CNE_1c27180	SSF56645	Acyl-CoA dehydrogenase NM domain-like
CNE_1c27190	SSF52833	Thioredoxin-like
CNE_1c27230	SSF141868	EAL domain-like
CNE_1c27230	SSF55073	Nucleotide cyclase
CNE_1c27230	SSF55785	PYP-like sensor domain (PAS domain)
CNE_1c27240	SSF56349	DNA breaking-rejoining enzymes
CNE_1c27260	SSF46955	Putative DNA-binding domain
CNE_1c27270	SSF81901	HCP-like
CNE_1c27300	SSF52402	Adenine nucleotide alpha hydrolases-like
CNE_1c27310	SSF48452	TPR-like
CNE_1c27320	SSF103088	OmpA-like
CNE_1c27330	SSF52964	TolB, N-terminal domain
CNE_1c27330	SSF69304	Tricorn protease N-terminal domain
CNE_1c27340	SSF74653	TolA/TonB C-terminal domain
CNE_1c27370	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
CNE_1c27380	SSF53383	PLP-dependent transferases
CNE_1c27430	SSF50998	Quinoprotein alcohol dehydrogenase-like
CNE_1c27440	SSF54523	Pili subunits
CNE_1c27450	SSF54523	Pili subunits
CNE_1c27460	SSF54523	Pili subunits
CNE_1c27470	SSF53597	Dihydrofolate reductase-like
CNE_1c27470	SSF53927	Cytidine deaminase-like
CNE_1c27480	SSF63380	Riboflavin synthase domain-like
CNE_1c27530	SSF142695	RibA-like
CNE_1c27530	SSF55821	YrdC/RibB
CNE_1c27540	SSF52121	Lumazine synthase
CNE_1c27550	SSF48013	NusB-like
CNE_1c27560	SSF53383	PLP-dependent transferases
CNE_1c27570	SSF53955	Lysozyme-like
CNE_1c27580	SSF143968	UbiD C-terminal domain-like
CNE_1c27580	SSF50475	FMN-binding split barrel
CNE_1c27590	SSF56801	Acetyl-CoA synthetase-like
CNE_1c27600	SSF47616	GST C-terminal domain-like
CNE_1c27600	SSF52833	Thioredoxin-like
CNE_1c27610	SSF53474	alpha/beta-Hydrolases
CNE_1c27620	SSF74650	Galactose mutarotase-like
CNE_1c27640	SSF47413	lambda repressor-like DNA-binding domains
CNE_1c27650	SSF103473	MFS general substrate transporter
CNE_1c27670	SSF109604	HD-domain/PDEase-like
CNE_1c27670	SSF46785	"Winged helix" DNA-binding domain
CNE_1c27740	SSF52833	Thioredoxin-like
CNE_1c27750	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CNE_1c27860	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CNE_1c27880	SSF53955	Lysozyme-like
CNE_1c27970	SSF143422	Transposase IS200-like
CNE_1c27990	SSF110849	ParB/Sulfiredoxin
CNE_1c28000	SSF74650	Galactose mutarotase-like
CNE_1c28020	SSF89796	CoA-transferase family III (CaiB/BaiF)
CNE_1c28030	SSF53850	Periplasmic binding protein-like II
CNE_1c28040	SSF46785	"Winged helix" DNA-binding domain
CNE_1c28040	SSF53850	Periplasmic binding protein-like II
CNE_1c28050	SSF53474	alpha/beta-Hydrolases
CNE_1c28060	SSF54001	Cysteine proteinases
CNE_1c28080	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
CNE_1c28120	SSF46689	Homeodomain-like
CNE_1c28120	SSF48498	Tetracyclin repressor-like, C-terminal domain
CNE_1c28130	SSF111369	HlyD-like secretion proteins
CNE_1c28140	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
CNE_1c28140	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
CNE_1c28140	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
CNE_1c28150	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
CNE_1c28160	SSF52821	Rhodanese/Cell cycle control phosphatase
CNE_1c28170	SSF56954	Outer membrane efflux proteins (OEP)
CNE_1c28200	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
CNE_1c28210	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
CNE_1c28220	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
CNE_1c28230	SSF53738	Phosphoglucomutase, first 3 domains
CNE_1c28230	SSF55957	Phosphoglucomutase, C-terminal domain
CNE_1c28240	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
CNE_1c28260	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
CNE_1c28310	SSF53448	Nucleotide-diphospho-sugar transferases
CNE_1c28320	SSF51905	FAD/NAD(P)-binding domain
CNE_1c28330	SSF51735	NAD(P)-binding Rossmann-fold domains
CNE_1c28340	SSF51658	Xylose isomerase-like
CNE_1c28350	SSF103481	Multidrug resistance efflux transporter EmrE
CNE_1c28360	SSF53448	Nucleotide-diphospho-sugar transferases
CNE_1c28410	SSF53254	Phosphoglycerate mutase-like
CNE_1c28420	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
CNE_1c28430	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
CNE_1c28440	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
CNE_1c28450	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
CNE_1c28460	SSF53448	Nucleotide-diphospho-sugar transferases
CNE_1c28470	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
CNE_1c28480	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
CNE_1c28490	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
CNE_1c28500	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
CNE_1c28510	SSF88713	Glycoside hydrolase/deacetylase
CNE_1c28520	SSF56801	Acetyl-CoA synthetase-like
CNE_1c28530	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CNE_1c28550	SSF51182	RmlC-like cupins
CNE_1c28550	SSF53448	Nucleotide-diphospho-sugar transferases
CNE_1c28560	SSF51182	RmlC-like cupins
CNE_1c28570	SSF53448	Nucleotide-diphospho-sugar transferases
CNE_1c28580	SSF51735	NAD(P)-binding Rossmann-fold domains
CNE_1c28590	SSF51735	NAD(P)-binding Rossmann-fold domains
CNE_1c28600	SSF56300	Metallo-dependent phosphatases
CNE_1c28610	SSF69593	Glycerol-3-phosphate (1)-acyltransferase
CNE_1c28620	SSF51338	Composite domain of metallo-dependent hydrolases
CNE_1c28620	SSF51556	Metallo-dependent hydrolases
CNE_1c28630	SSF53671	Aspartate/ornithine carbamoyltransferase
CNE_1c28640	SSF53271	PRTase-like
CNE_1c28650	SSF53098	Ribonuclease H-like
CNE_1c28660	SSF143456	VC0467-like
CNE_1c28670	SSF55120	Pseudouridine synthase
CNE_1c28670	SSF55174	Alpha-L RNA-binding motif
CNE_1c28680	SSF48452	TPR-like
CNE_1c28690	SSF69618	HemD-like
CNE_1c28700	SSF53850	Periplasmic binding protein-like II
CNE_1c28700	SSF54782	Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain
CNE_1c28710	SSF51621	Phosphoenolpyruvate/pyruvate domain
CNE_1c28720	SSF47240	Ferritin-like
CNE_1c28730	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
CNE_1c28730	SSF88946	Sigma2 domain of RNA polymerase sigma factors
CNE_1c28750	SSF48557	L-aspartase-like
CNE_1c28780	SSF88723	PIN domain-like
CNE_1c28790	SSF53383	PLP-dependent transferases
CNE_1c28790	SSF55904	Ornithine decarboxylase C-terminal domain
CNE_1c28800	SSF51283	dUTPase-like
CNE_1c28810	SSF53927	Cytidine deaminase-like
CNE_1c28830	SSF81342	Transmembrane di-heme cytochromes
CNE_1c28850	SSF54862	4Fe-4S ferredoxins
CNE_1c28860	SSF50692	ADC-like
CNE_1c28860	SSF53706	Formate dehydrogenase/DMSO reductase, domains 1-3
CNE_1c28880	SSF89155	TorD-like
CNE_1c28890	SSF54862	4Fe-4S ferredoxins
CNE_1c28920	SSF117916	Fe-S cluster assembly (FSCA) domain-like
CNE_1c28920	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CNE_1c28940	SSF103088	OmpA-like
CNE_1c28950	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
CNE_1c28950	SSF50249	Nucleic acid-binding proteins
CNE_1c28950	SSF52374	Nucleotidylyl transferase
CNE_1c28950	SSF57770	Methionyl-tRNA synthetase (MetRS), Zn-domain
CNE_1c28960	SSF51230	Single hybrid motif
CNE_1c28960	SSF51246	Rudiment single hybrid motif
CNE_1c28960	SSF52096	ClpP/crotonase
CNE_1c28960	SSF52440	PreATP-grasp domain
CNE_1c28960	SSF56059	Glutathione synthetase ATP-binding domain-like
CNE_1c28970	SSF56801	Acetyl-CoA synthetase-like
CNE_1c28980	SSF46785	"Winged helix" DNA-binding domain
CNE_1c28980	SSF55781	GAF domain-like
CNE_1c28990	SSF53850	Periplasmic binding protein-like II
CNE_1c29000	SSF161098	MetI-like
CNE_1c29010	SSF161098	MetI-like
CNE_1c29020	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CNE_1c29030	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CNE_1c29090	SSF52374	Nucleotidylyl transferase
CNE_1c29110	SSF52317	Class I glutamine amidotransferase-like
CNE_1c29110	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CNE_1c29120	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CNE_1c29140	SSF53383	PLP-dependent transferases
CNE_1c29150	SSF53807	"Helical backbone" metal receptor
CNE_1c29160	SSF53254	Phosphoglycerate mutase-like
CNE_1c29180	SSF52733	Nicotinate mononucleotide:5,6-dimethylbenzimidazole phosphoribosyltransferase (CobT)
CNE_1c29190	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CNE_1c29200	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CNE_1c29210	SSF81345	ABC transporter involved in vitamin B12 uptake, BtuC
CNE_1c29220	SSF56935	Porins
CNE_1c29240	SSF102829	Cell division protein ZapA-like
CNE_1c29250	SSF88697	PUA domain-like
CNE_1c29280	SSF56801	Acetyl-CoA synthetase-like
CNE_1c29290	SSF52096	ClpP/crotonase
CNE_1c29300	SSF53850	Periplasmic binding protein-like II
CNE_1c29320	SSF46785	"Winged helix" DNA-binding domain
CNE_1c29320	SSF48008	GntR ligand-binding domain-like
CNE_1c29360	SSF46785	"Winged helix" DNA-binding domain
CNE_1c29360	SSF53850	Periplasmic binding protein-like II
CNE_1c29370	SSF143975	IlvD/EDD N-terminal domain-like
CNE_1c29370	SSF52016	LeuD/IlvD-like
CNE_1c29390	SSF102400	DNA polymerase III chi subunit
CNE_1c29400	SSF52949	Macro domain-like
CNE_1c29400	SSF53187	Zn-dependent exopeptidases
CNE_1c29430	SSF53800	Chelatase
CNE_1c29440	SSF53790	Tetrapyrrole methylase
CNE_1c29450	SSF50447	Translation proteins
CNE_1c29450	SSF50465	EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
CNE_1c29450	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CNE_1c29460	SSF52402	Adenine nucleotide alpha hydrolases-like
CNE_1c29470	SSF52402	Adenine nucleotide alpha hydrolases-like
CNE_1c29490	SSF55124	Nitrite/Sulfite reductase N-terminal domain-like
CNE_1c29490	SSF56014	Nitrite and sulphite reductase 4Fe-4S domain-like
CNE_1c29510	SSF46785	"Winged helix" DNA-binding domain
CNE_1c29510	SSF53850	Periplasmic binding protein-like II
CNE_1c29520	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
CNE_1c29530	SSF53822	Periplasmic binding protein-like I
CNE_1c29540	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
CNE_1c29540	SSF51735	NAD(P)-binding Rossmann-fold domains
CNE_1c29550	SSF53474	alpha/beta-Hydrolases
CNE_1c29590	SSF48208	Six-hairpin glycosidases
CNE_1c29600	SSF51161	Trimeric LpxA-like enzymes
CNE_1c29610	SSF53448	Nucleotide-diphospho-sugar transferases
CNE_1c29620	SSF88713	Glycoside hydrolase/deacetylase
CNE_1c29640	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
CNE_1c29660	SSF63829	Calcium-dependent phosphotriesterase
CNE_1c29670	SSF53187	Zn-dependent exopeptidases
CNE_1c29680	SSF51338	Composite domain of metallo-dependent hydrolases
CNE_1c29680	SSF51556	Metallo-dependent hydrolases
CNE_1c29690	SSF51338	Composite domain of metallo-dependent hydrolases
CNE_1c29690	SSF51556	Metallo-dependent hydrolases
CNE_1c29700	SSF51182	RmlC-like cupins
CNE_1c29710	SSF111326	Urocanase
CNE_1c29720	SSF48557	L-aspartase-like
CNE_1c29730	SSF46785	"Winged helix" DNA-binding domain
CNE_1c29730	SSF64288	Chorismate lyase-like
CNE_1c29740	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CNE_1c29750	SSF161098	MetI-like
CNE_1c29760	SSF53850	Periplasmic binding protein-like II
CNE_1c29770	SSF51735	NAD(P)-binding Rossmann-fold domains
CNE_1c29780	SSF52343	Ferredoxin reductase-like, C-terminal NADP-linked domain
CNE_1c29780	SSF54292	2Fe-2S ferredoxin-like
CNE_1c29780	SSF63380	Riboflavin synthase domain-like
CNE_1c29790	SSF53383	PLP-dependent transferases
CNE_1c29800	SSF53098	Ribonuclease H-like
CNE_1c29810	SSF46689	Homeodomain-like
CNE_1c29820	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CNE_1c29830	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CNE_1c29860	SSF53822	Periplasmic binding protein-like I
CNE_1c29880	SSF54534	FKBP-like
CNE_1c29900	SSF143800	L28p-like
CNE_1c29910	SSF57829	Zn-binding ribosomal proteins
CNE_1c29920	SSF46977	Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain
CNE_1c29920	SSF51905	FAD/NAD(P)-binding domain
CNE_1c29920	SSF56425	Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain
CNE_1c29930	SSF51690	Nicotinate/Quinolinate PRTase C-terminal domain-like
CNE_1c29930	SSF54675	Nicotinate/Quinolinate PRTase N-terminal domain-like
CNE_1c29940	SSF142754	NadA-like
CNE_1c29960	SSF50182	Sm-like ribonucleoproteins
CNE_1c29960	SSF82689	Mechanosensitive channel protein MscS (YggB), C-terminal domain
CNE_1c29960	SSF82861	Mechanosensitive channel protein MscS (YggB), transmembrane region
CNE_1c29970	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
CNE_1c29980	SSF53328	Formyltransferase
CNE_1c29990	SSF46894	C-terminal effector domain of the bipartite response regulators
CNE_1c29990	SSF52172	CheY-like
CNE_1c30000	SSF47384	Homodimeric domain of signal transducing histidine kinase
CNE_1c30000	SSF52172	CheY-like
CNE_1c30000	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
CNE_1c30010	SSF52374	Nucleotidylyl transferase
CNE_1c30010	SSF82114	Riboflavin kinase-like
CNE_1c30020	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
CNE_1c30020	SSF50677	ValRS/IleRS/LeuRS editing domain
CNE_1c30020	SSF52374	Nucleotidylyl transferase
CNE_1c30040	SSF102645	CoaB-like
CNE_1c30040	SSF52507	Homo-oligomeric flavin-containing Cys decarboxylases, HFCD
CNE_1c30050	SSF51283	dUTPase-like
CNE_1c30060	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
CNE_1c30070	SSF53850	Periplasmic binding protein-like II
CNE_1c30080	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CNE_1c30080	SSF81923	Double Clp-N motif
CNE_1c30090	SSF54736	ClpS-like
CNE_1c30100	SSF50249	Nucleic acid-binding proteins
CNE_1c30110	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
CNE_1c30120	SSF53659	Isocitrate/Isopropylmalate dehydrogenase-like
CNE_1c30130	SSF55120	Pseudouridine synthase
CNE_1c30160	SSF89963	YajQ-like
CNE_1c30170	SSF56176	FAD-binding/transporter-associated domain-like
CNE_1c30170	SSF56194	Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase, MurB, C-terminal domain
CNE_1c30180	SSF51182	RmlC-like cupins
CNE_1c30190	SSF53671	Aspartate/ornithine carbamoyltransferase
CNE_1c30210	SSF46992	Ribosomal protein S20
CNE_1c30250	SSF118116	DNA mismatch repair protein MutL
CNE_1c30250	SSF54211	Ribosomal protein S5 domain 2-like
CNE_1c30250	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
CNE_1c30260	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CNE_1c30270	SSF55729	Acyl-CoA N-acyltransferases (Nat)
CNE_1c30280	SSF46785	"Winged helix" DNA-binding domain
CNE_1c30280	SSF48008	GntR ligand-binding domain-like
CNE_1c30300	SSF75304	Amidase signature (AS) enzymes
CNE_1c30310	SSF51338	Composite domain of metallo-dependent hydrolases
CNE_1c30310	SSF51556	Metallo-dependent hydrolases
CNE_1c30320	SSF103473	MFS general substrate transporter
CNE_1c30330	SSF55326	PurM N-terminal domain-like
CNE_1c30330	SSF56042	PurM C-terminal domain-like
CNE_1c30350	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CNE_1c30360	SSF56784	HAD-like
CNE_1c30370	SSF81301	Nucleotidyltransferase
CNE_1c30370	SSF81891	Poly A polymerase C-terminal region-like
CNE_1c30380	SSF55083	6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK
CNE_1c30390	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CNE_1c30400	SSF51621	Phosphoenolpyruvate/pyruvate domain
CNE_1c30410	SSF161098	MetI-like
CNE_1c30420	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CNE_1c30430	SSF56322	ADC synthase
CNE_1c30430	SSF56752	D-aminoacid aminotransferase-like PLP-dependent enzymes
CNE_1c30440	SSF46565	Chaperone J-domain
CNE_1c30440	SSF49493	HSP40/DnaJ peptide-binding domain
CNE_1c30440	SSF57938	DnaJ/Hsp40 cysteine-rich domain
CNE_1c30450	SSF100920	Heat shock protein 70kD (HSP70), peptide-binding domain
CNE_1c30450	SSF100934	Heat shock protein 70kD (HSP70), C-terminal subdomain
CNE_1c30450	SSF53067	Actin-like ATPase domain
CNE_1c30460	SSF89028	Cobalamin adenosyltransferase-like
CNE_1c30470	SSF55103	FAD-linked oxidases, C-terminal domain
CNE_1c30470	SSF56176	FAD-binding/transporter-associated domain-like
CNE_1c30480	SSF46785	"Winged helix" DNA-binding domain
CNE_1c30480	SSF53850	Periplasmic binding protein-like II
CNE_1c30490	SSF55729	Acyl-CoA N-acyltransferases (Nat)
CNE_1c30500	SSF55103	FAD-linked oxidases, C-terminal domain
CNE_1c30500	SSF56176	FAD-binding/transporter-associated domain-like
CNE_1c30510	SSF81324	Voltage-gated potassium channels
CNE_1c30520	SSF55103	FAD-linked oxidases, C-terminal domain
CNE_1c30520	SSF56176	FAD-binding/transporter-associated domain-like
CNE_1c30530	SSF54862	4Fe-4S ferredoxins
CNE_1c30560	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
CNE_1c30570	SSF46785	"Winged helix" DNA-binding domain
CNE_1c30580	SSF52833	Thioredoxin-like
CNE_1c30590	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CNE_1c30600	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CNE_1c30610	SSF51419	PLP-binding barrel
CNE_1c30620	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
CNE_1c30620	SSF51735	NAD(P)-binding Rossmann-fold domains
CNE_1c30640	SSF47240	Ferritin-like
CNE_1c30660	SSF56634	Heme-dependent catalase-like
CNE_1c30670	SSF46785	"Winged helix" DNA-binding domain
CNE_1c30670	SSF53850	Periplasmic binding protein-like II
CNE_1c30680	SSF50249	Nucleic acid-binding proteins
CNE_1c30680	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CNE_1c30690	SSF111337	QueA-like
CNE_1c30700	SSF51713	tRNA-guanine transglycosylase
CNE_1c30720	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
CNE_1c30730	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
CNE_1c30740	SSF52172	CheY-like
CNE_1c30750	SSF47384	Homodimeric domain of signal transducing histidine kinase
CNE_1c30750	SSF52172	CheY-like
CNE_1c30750	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
CNE_1c30760	SSF47384	Homodimeric domain of signal transducing histidine kinase
CNE_1c30760	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
CNE_1c30770	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
CNE_1c30780	SSF101874	YceI-like
CNE_1c30790	SSF101874	YceI-like
CNE_1c30800	SSF81342	Transmembrane di-heme cytochromes
CNE_1c30810	SSF48557	L-aspartase-like
CNE_1c30820	SSF47616	GST C-terminal domain-like
CNE_1c30820	SSF52833	Thioredoxin-like
CNE_1c30830	SSF52402	Adenine nucleotide alpha hydrolases-like
CNE_1c30840	SSF55811	Nudix
CNE_1c30850	SSF51735	NAD(P)-binding Rossmann-fold domains
CNE_1c30850	SSF52283	Formate/glycerate dehydrogenase catalytic domain-like
CNE_1c30860	SSF50692	ADC-like
CNE_1c30880	SSF52467	DHS-like NAD/FAD-binding domain
CNE_1c30890	SSF52172	CheY-like
CNE_1c30900	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
CNE_1c30910	SSF52833	Thioredoxin-like
CNE_1c30930	SSF53720	ALDH-like
CNE_1c30940	SSF48019	post-AAA+ oligomerization domain-like
CNE_1c30940	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CNE_1c30960	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
CNE_1c30960	SSF50677	ValRS/IleRS/LeuRS editing domain
CNE_1c30960	SSF52374	Nucleotidylyl transferase
CNE_1c30970	SSF51735	NAD(P)-binding Rossmann-fold domains
CNE_1c30970	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
CNE_1c30990	SSF46785	"Winged helix" DNA-binding domain
CNE_1c31000	SSF46785	"Winged helix" DNA-binding domain
CNE_1c31000	SSF53850	Periplasmic binding protein-like II
CNE_1c31010	SSF50475	FMN-binding split barrel
CNE_1c31020	SSF51735	NAD(P)-binding Rossmann-fold domains
CNE_1c31020	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
CNE_1c31030	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
CNE_1c31030	SSF52922	TK C-terminal domain-like
CNE_1c31040	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
CNE_1c31050	SSF75217	alpha/beta knot
CNE_1c31050	SSF88697	PUA domain-like
CNE_1c31060	SSF140804	YidB-like
CNE_1c31070	SSF52038	Barstar-related
CNE_1c31080	SSF53933	Microbial ribonucleases
CNE_1c31090	SSF51735	NAD(P)-binding Rossmann-fold domains
CNE_1c31090	SSF53223	Aminoacid dehydrogenase-like, N-terminal domain
CNE_1c31090	SSF53659	Isocitrate/Isopropylmalate dehydrogenase-like
CNE_1c31100	SSF55326	PurM N-terminal domain-like
CNE_1c31100	SSF56042	PurM C-terminal domain-like
CNE_1c31110	SSF101307	YutG-like
CNE_1c31120	SSF142433	CinA-like
CNE_1c31130	SSF51366	Ribulose-phoshate binding barrel
CNE_1c31140	SSF103481	Multidrug resistance efflux transporter EmrE
CNE_1c31150	SSF143865	CorA soluble domain-like
CNE_1c31150	SSF144083	Magnesium transport protein CorA, transmembrane region
CNE_1c31160	SSF53955	Lysozyme-like
CNE_1c31170	SSF51735	NAD(P)-binding Rossmann-fold domains
CNE_1c31170	SSF53223	Aminoacid dehydrogenase-like, N-terminal domain
CNE_1c31180	SSF74653	TolA/TonB C-terminal domain
CNE_1c31190	SSF50249	Nucleic acid-binding proteins
CNE_1c31200	SSF51735	NAD(P)-binding Rossmann-fold domains
CNE_1c31210	SSF64288	Chorismate lyase-like
CNE_1c31220	SSF53474	alpha/beta-Hydrolases
CNE_1c31230	SSF51984	MurCD N-terminal domain
CNE_1c31230	SSF53244	MurD-like peptide ligases, peptide-binding domain
CNE_1c31230	SSF53623	MurD-like peptide ligases, catalytic domain
CNE_1c31250	SSF52833	Thioredoxin-like
CNE_1c31260	SSF52304	Type II 3-dehydroquinate dehydratase
CNE_1c31270	SSF51230	Single hybrid motif
CNE_1c31280	SSF51246	Rudiment single hybrid motif
CNE_1c31280	SSF52440	PreATP-grasp domain
CNE_1c31280	SSF56059	Glutathione synthetase ATP-binding domain-like
CNE_1c31290	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
CNE_1c31310	SSF52833	Thioredoxin-like
CNE_1c31320	SSF53613	Ribokinase-like
CNE_1c31370	SSF56935	Porins
CNE_1c31380	SSF46785	"Winged helix" DNA-binding domain
CNE_1c31380	SSF53850	Periplasmic binding protein-like II
CNE_1c31390	SSF55331	Tautomerase/MIF
CNE_1c31410	SSF51430	NAD(P)-linked oxidoreductase
CNE_1c31450	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
CNE_1c31460	SSF53850	Periplasmic binding protein-like II
CNE_1c31470	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
CNE_1c31480	SSF46785	"Winged helix" DNA-binding domain
CNE_1c31480	SSF48008	GntR ligand-binding domain-like
CNE_1c31490	SSF103473	MFS general substrate transporter
CNE_1c31500	SSF51182	RmlC-like cupins
CNE_1c31520	SSF46626	Cytochrome c
CNE_1c31530	SSF51182	RmlC-like cupins
CNE_1c31540	SSF52096	ClpP/crotonase
CNE_1c31550	SSF89796	CoA-transferase family III (CaiB/BaiF)
CNE_1c31560	SSF53850	Periplasmic binding protein-like II
CNE_1c31570	SSF46785	"Winged helix" DNA-binding domain
CNE_1c31570	SSF53850	Periplasmic binding protein-like II
CNE_1c31580	SSF52266	SGNH hydrolase
CNE_1c31590	SSF52266	SGNH hydrolase
CNE_1c31600	SSF51569	Aldolase
CNE_1c31610	SSF46785	"Winged helix" DNA-binding domain
CNE_1c31610	SSF53850	Periplasmic binding protein-like II
CNE_1c31620	SSF53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes
CNE_1c31630	SSF103473	MFS general substrate transporter
CNE_1c31670	SSF47240	Ferritin-like
CNE_1c31680	SSF48168	R1 subunit of ribonucleotide reductase, N-terminal domain
CNE_1c31680	SSF51998	PFL-like glycyl radical enzymes
CNE_1c31690	SSF55846	N-acetylmuramoyl-L-alanine amidase-like
CNE_1c31700	SSF46689	Homeodomain-like
CNE_1c31700	SSF52172	CheY-like
CNE_1c31700	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CNE_1c31710	SSF47384	Homodimeric domain of signal transducing histidine kinase
CNE_1c31710	SSF55785	PYP-like sensor domain (PAS domain)
CNE_1c31710	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
CNE_1c31740	SSF47364	Domain of the SRP/SRP receptor G-proteins
CNE_1c31740	SSF47446	Signal peptide-binding domain
CNE_1c31740	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CNE_1c31750	SSF53271	PRTase-like
CNE_1c31770	SSF54523	Pili subunits
CNE_1c31780	SSF54523	Pili subunits
CNE_1c31810	SSF53955	Lysozyme-like
CNE_1c31820	SSF52954	Class II aaRS ABD-related
CNE_1c31820	SSF55681	Class II aaRS and biotin synthetases
CNE_1c31820	SSF55826	YbaK/ProRS associated domain
CNE_1c31830	SSF55811	Nudix
CNE_1c31850	SSF53633	Carbamate kinase-like
CNE_1c31850	SSF88697	PUA domain-like
CNE_1c31860	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CNE_1c31860	SSF82051	Obg GTP-binding protein N-terminal domain
CNE_1c31870	SSF110324	Ribosomal L27 protein-like
CNE_1c31880	SSF141091	L21p-like
CNE_1c31890	SSF48576	Terpenoid synthases
CNE_1c31920	SSF160246	EspE N-terminal domain-like
CNE_1c31920	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CNE_1c31950	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CNE_1c31960	SSF160950	YacF-like
CNE_1c31970	SSF57716	Glucocorticoid receptor-like (DNA-binding domain)
CNE_1c31990	SSF55811	Nudix
CNE_1c32000	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CNE_1c32010	SSF56266	DmpA/ArgJ-like
CNE_1c32020	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CNE_1c32020	SSF81767	Pre-protein crosslinking domain of SecA
CNE_1c32020	SSF81886	Helical scaffold and wing domains of SecA
CNE_1c32040	SSF54211	Ribosomal protein S5 domain 2-like
CNE_1c32050	SSF52833	Thioredoxin-like
CNE_1c32060	SSF52490	Tubulin nucleotide-binding domain-like
CNE_1c32060	SSF55307	Tubulin C-terminal domain-like
CNE_1c32070	SSF53067	Actin-like ATPase domain
CNE_1c32090	SSF52440	PreATP-grasp domain
CNE_1c32090	SSF56059	Glutathione synthetase ATP-binding domain-like
CNE_1c32100	SSF51984	MurCD N-terminal domain
CNE_1c32100	SSF53244	MurD-like peptide ligases, peptide-binding domain
CNE_1c32100	SSF53623	MurD-like peptide ligases, catalytic domain
CNE_1c32110	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
CNE_1c32130	SSF51984	MurCD N-terminal domain
CNE_1c32130	SSF53244	MurD-like peptide ligases, peptide-binding domain
CNE_1c32130	SSF53623	MurD-like peptide ligases, catalytic domain
CNE_1c32150	SSF53244	MurD-like peptide ligases, peptide-binding domain
CNE_1c32150	SSF53623	MurD-like peptide ligases, catalytic domain
CNE_1c32150	SSF63418	MurE/MurF N-terminal domain
CNE_1c32160	SSF53244	MurD-like peptide ligases, peptide-binding domain
CNE_1c32160	SSF53623	MurD-like peptide ligases, catalytic domain
CNE_1c32160	SSF63418	MurE/MurF N-terminal domain
CNE_1c32170	SSF56519	Penicillin binding protein dimerisation domain
CNE_1c32170	SSF56601	beta-lactamase/transpeptidase-like
CNE_1c32190	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
CNE_1c32190	SSF81799	Putative methyltransferase TM0872, insert domain
CNE_1c32200	SSF89447	AbrB/MazE/MraZ-like
CNE_1c32210	SSF47240	Ferritin-like
CNE_1c32220	SSF56935	Porins
CNE_1c32230	SSF53850	Periplasmic binding protein-like II
CNE_1c32240	SSF46785	"Winged helix" DNA-binding domain
CNE_1c32260	SSF56801	Acetyl-CoA synthetase-like
CNE_1c32270	SSF46689	Homeodomain-like
CNE_1c32270	SSF48498	Tetracyclin repressor-like, C-terminal domain
CNE_1c32290	SSF50692	ADC-like
CNE_1c32290	SSF53706	Formate dehydrogenase/DMSO reductase, domains 1-3
CNE_1c32300	SSF53822	Periplasmic binding protein-like I
CNE_1c32310	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CNE_1c32320	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CNE_1c32330	SSF161098	MetI-like
CNE_1c32340	SSF161098	MetI-like
CNE_1c32350	SSF53850	Periplasmic binding protein-like II
CNE_1c32360	SSF53187	Zn-dependent exopeptidases
CNE_1c32360	SSF55031	Bacterial exopeptidase dimerisation domain
CNE_1c32440	SSF52096	ClpP/crotonase
CNE_1c32450	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CNE_1c32460	SSF161098	MetI-like
CNE_1c32470	SSF53850	Periplasmic binding protein-like II
CNE_1c32480	SSF52096	ClpP/crotonase
CNE_1c32490	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
CNE_1c32500	SSF56801	Acetyl-CoA synthetase-like
CNE_1c32510	SSF50685	Barwin-like endoglucanases
CNE_1c32530	SSF110069	ApaG-like
CNE_1c32540	SSF51366	Ribulose-phoshate binding barrel
CNE_1c32550	SSF56784	HAD-like
CNE_1c32560	SSF56322	ADC synthase
CNE_1c32570	SSF52317	Class I glutamine amidotransferase-like
CNE_1c32580	SSF47648	Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain
CNE_1c32580	SSF52418	Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain
CNE_1c32590	SSF51366	Ribulose-phoshate binding barrel
CNE_1c32600	SSF55154	CYTH-like phosphatases
CNE_1c32610	SSF52141	Uracil-DNA glycosylase-like
CNE_1c32620	SSF54975	Acylphosphatase/BLUF domain-like
CNE_1c32630	SSF161098	MetI-like
CNE_1c32640	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CNE_1c32660	SSF50156	PDZ domain-like
CNE_1c32660	SSF55486	Metalloproteases ("zincins"), catalytic domain
CNE_1c32670	SSF50129	GroES-like
CNE_1c32670	SSF51735	NAD(P)-binding Rossmann-fold domains
CNE_1c32680	SSF52833	Thioredoxin-like
CNE_1c32680	SSF54423	DsbC/DsbG N-terminal domain-like
CNE_1c32690	SSF51905	FAD/NAD(P)-binding domain
CNE_1c32700	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CNE_1c32700	SSF81271	TGS-like
CNE_1c32740	SSF53167	Purine and uridine phosphorylases
CNE_1c32760	SSF51735	NAD(P)-binding Rossmann-fold domains
CNE_1c32760	SSF69075	Glutamyl tRNA-reductase dimerization domain
CNE_1c32760	SSF69742	Glutamyl tRNA-reductase catalytic, N-terminal domain
CNE_1c32770	SSF75620	Release factor
CNE_1c32790	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
CNE_1c32800	SSF52833	Thioredoxin-like
CNE_1c32810	SSF52507	Homo-oligomeric flavin-containing Cys decarboxylases, HFCD
CNE_1c32830	SSF53720	ALDH-like
CNE_1c32840	SSF51735	NAD(P)-binding Rossmann-fold domains
CNE_1c32840	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
CNE_1c32850	SSF46785	"Winged helix" DNA-binding domain
CNE_1c32850	SSF54909	Dimeric alpha+beta barrel
CNE_1c32860	SSF51735	NAD(P)-binding Rossmann-fold domains
CNE_1c32860	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
CNE_1c32880	SSF53850	Periplasmic binding protein-like II
CNE_1c32890	SSF56801	Acetyl-CoA synthetase-like
CNE_1c32900	SSF46785	"Winged helix" DNA-binding domain
CNE_1c32900	SSF53850	Periplasmic binding protein-like II
CNE_1c32910	SSF46785	"Winged helix" DNA-binding domain
CNE_1c32930	SSF56954	Outer membrane efflux proteins (OEP)
CNE_1c32940	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
CNE_1c32940	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
CNE_1c32940	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
CNE_1c32950	SSF111369	HlyD-like secretion proteins
CNE_1c32970	SSF56300	Metallo-dependent phosphatases
CNE_1c32980	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CNE_1c33010	SSF51445	(Trans)glycosidases
CNE_1c33040	SSF53850	Periplasmic binding protein-like II
CNE_1c33050	SSF75304	Amidase signature (AS) enzymes
CNE_1c33060	SSF46785	"Winged helix" DNA-binding domain
CNE_1c33060	SSF48008	GntR ligand-binding domain-like
CNE_1c33080	SSF52172	CheY-like
CNE_1c33090	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
CNE_1c33100	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CNE_1c33110	SSF88723	PIN domain-like
CNE_1c33120	SSF143120	YefM-like
CNE_1c33130	SSF56349	DNA breaking-rejoining enzymes
CNE_1c33270	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CNE_1c33340	SSF101738	SspB-like
CNE_1c33350	SSF47616	GST C-terminal domain-like
CNE_1c33350	SSF52833	Thioredoxin-like
CNE_1c33360	SSF46626	Cytochrome c
CNE_1c33370	SSF81342	Transmembrane di-heme cytochromes
CNE_1c33370	SSF81648	a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
CNE_1c33380	SSF50022	ISP domain
CNE_1c33390	SSF81330	Gated mechanosensitive channel
CNE_1c33400	SSF102705	NIF3 (NGG1p interacting factor 3)-like
CNE_1c33410	SSF50156	PDZ domain-like
CNE_1c33410	SSF50494	Trypsin-like serine proteases
CNE_1c33420	SSF56935	Porins
CNE_1c33470	SSF54197	HIT-like
CNE_1c33490	SSF101386	all-alpha NTP pyrophosphatases
CNE_1c33500	SSF141734	HisI-like
CNE_1c33510	SSF51366	Ribulose-phoshate binding barrel
CNE_1c33520	SSF51366	Ribulose-phoshate binding barrel
CNE_1c33530	SSF52317	Class I glutamine amidotransferase-like
CNE_1c33550	SSF54211	Ribosomal protein S5 domain 2-like
CNE_1c33560	SSF53383	PLP-dependent transferases
CNE_1c33570	SSF53720	ALDH-like
CNE_1c33580	SSF53850	Periplasmic binding protein-like II
CNE_1c33590	SSF55205	EPT/RTPC-like
CNE_1c33600	SSF82657	BolA-like
CNE_1c33620	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CNE_1c33630	SSF52091	SpoIIaa-like
CNE_1c33680	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CNE_1c33690	SSF53850	Periplasmic binding protein-like II
CNE_1c33700	SSF55729	Acyl-CoA N-acyltransferases (Nat)
CNE_1c33710	SSF46548	alpha-helical ferredoxin
CNE_1c33710	SSF51971	Nucleotide-binding domain
CNE_1c33720	SSF51395	FMN-linked oxidoreductases
CNE_1c33720	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
CNE_1c33720	SSF69336	Alpha subunit of glutamate synthase, C-terminal domain
CNE_1c33730	SSF143422	Transposase IS200-like
CNE_1c33740	SSF109604	HD-domain/PDEase-like
CNE_1c33750	SSF56796	Dehydroquinate synthase-like
CNE_1c33760	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CNE_1c33810	SSF53067	Actin-like ATPase domain
CNE_1c33820	SSF53955	Lysozyme-like
CNE_1c33820	SSF56601	beta-lactamase/transpeptidase-like
CNE_1c33830	SSF55387	Frataxin/Nqo15-like
CNE_1c33840	SSF50621	Alanine racemase C-terminal domain-like
CNE_1c33840	SSF51419	PLP-binding barrel
CNE_1c33860	SSF56524	Oxidoreductase molybdopterin-binding domain
CNE_1c33880	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
CNE_1c33880	SSF88946	Sigma2 domain of RNA polymerase sigma factors
CNE_1c33920	SSF46626	Cytochrome c
CNE_1c33930	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CNE_1c33940	SSF51569	Aldolase
CNE_1c33950	SSF143865	CorA soluble domain-like
CNE_1c33950	SSF144083	Magnesium transport protein CorA, transmembrane region
CNE_1c33960	SSF52833	Thioredoxin-like
CNE_1c33960	SSF74863	Thiol:disulfide interchange protein DsbD, N-terminal domain (DsbD-alpha)
CNE_1c33970	SSF54913	GlnB-like
CNE_1c33980	SSF64263	Prokaryotic ribosomal protein L17
CNE_1c33990	SSF47789	C-terminal domain of RNA polymerase alpha subunit
CNE_1c33990	SSF55257	RBP11-like subunits of RNA polymerase
CNE_1c33990	SSF56553	Insert subdomain of RNA polymerase alpha subunit
CNE_1c34000	SSF55174	Alpha-L RNA-binding motif
CNE_1c34010	SSF53137	Translational machinery components
CNE_1c34020	SSF46946	S13-like H2TH domain
CNE_1c34030	SSF57840	Ribosomal protein L36
CNE_1c34040	SSF50249	Nucleic acid-binding proteins
CNE_1c34050	SSF103491	Preprotein translocase SecY subunit
CNE_1c34060	SSF52080	Ribosomal proteins L15p and L18e
CNE_1c34070	SSF55129	Ribosomal protein L30p/L7e
CNE_1c34080	SSF54211	Ribosomal protein S5 domain 2-like
CNE_1c34080	SSF54768	dsRNA-binding domain-like
CNE_1c34090	SSF53137	Translational machinery components
CNE_1c34100	SSF56053	Ribosomal protein L6
CNE_1c34110	SSF56047	Ribosomal protein S8
CNE_1c34120	SSF57716	Glucocorticoid receptor-like (DNA-binding domain)
CNE_1c34130	SSF55282	RL5-like
CNE_1c34140	SSF50104	Translation proteins SH3-like domain
CNE_1c34150	SSF50193	Ribosomal protein L14
CNE_1c34160	SSF50249	Nucleic acid-binding proteins
CNE_1c34170	SSF46561	Ribosomal protein L29 (L29p)
CNE_1c34180	SSF54686	Ribosomal protein L16p/L10e
CNE_1c34190	SSF54814	Prokaryotic type KH domain (KH-domain type II)
CNE_1c34190	SSF54821	Ribosomal protein S3 C-terminal domain
CNE_1c34200	SSF54843	Ribosomal protein L22
CNE_1c34210	SSF54570	Ribosomal protein S19
CNE_1c34220	SSF50104	Translation proteins SH3-like domain
CNE_1c34220	SSF50249	Nucleic acid-binding proteins
CNE_1c34230	SSF54189	Ribosomal proteins S24e, L23 and L15e
CNE_1c34240	SSF52166	Ribosomal protein L4
CNE_1c34250	SSF50447	Translation proteins
CNE_1c34260	SSF50475	FMN-binding split barrel
CNE_1c34270	SSF51905	FAD/NAD(P)-binding domain
CNE_1c34280	SSF51735	NAD(P)-binding Rossmann-fold domains
CNE_1c34290	SSF53474	alpha/beta-Hydrolases
CNE_1c34290	SSF54427	NTF2-like
CNE_1c34300	SSF46689	Homeodomain-like
CNE_1c34340	SSF53474	alpha/beta-Hydrolases
CNE_1c34360	SSF54999	Ribosomal protein S10
CNE_1c34370	SSF50447	Translation proteins
CNE_1c34370	SSF50465	EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
CNE_1c34370	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CNE_1c34380	SSF50447	Translation proteins
CNE_1c34380	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CNE_1c34380	SSF54211	Ribosomal protein S5 domain 2-like
CNE_1c34380	SSF54980	EF-G C-terminal domain-like
CNE_1c34390	SSF47973	Ribosomal protein S7
CNE_1c34400	SSF50249	Nucleic acid-binding proteins
CNE_1c34410	SSF47819	HRDC-like
CNE_1c34410	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CNE_1c34420	SSF64484	beta and beta-prime subunits of DNA dependent RNA-polymerase
CNE_1c34430	SSF64484	beta and beta-prime subunits of DNA dependent RNA-polymerase
CNE_1c34440	SSF48300	Ribosomal protein L7/12, oligomerisation (N-terminal) domain
CNE_1c34440	SSF54736	ClpS-like
CNE_1c34450	SSF160369	Ribosomal protein L10-like
CNE_1c34470	SSF56808	Ribosomal protein L1
CNE_1c34480	SSF46906	Ribosomal protein L11, C-terminal domain
CNE_1c34480	SSF54747	Ribosomal L11/L12e N-terminal domain
CNE_1c34490	SSF50104	Translation proteins SH3-like domain
CNE_1c34490	SSF82679	N-utilization substance G protein NusG, N-terminal domain
CNE_1c34520	SSF50447	Translation proteins
CNE_1c34520	SSF50465	EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
CNE_1c34520	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CNE_1c34610	SSF56801	Acetyl-CoA synthetase-like
CNE_1c34650	SSF160272	Shew3726-like
CNE_1c34660	SSF52402	Adenine nucleotide alpha hydrolases-like
CNE_1c34670	SSF47240	Ferritin-like
CNE_1c34690	SSF47240	Ferritin-like
CNE_1c34700	SSF117916	Fe-S cluster assembly (FSCA) domain-like
CNE_1c34710	SSF52343	Ferredoxin reductase-like, C-terminal NADP-linked domain
CNE_1c34710	SSF54292	2Fe-2S ferredoxin-like
CNE_1c34710	SSF63380	Riboflavin synthase domain-like
CNE_1c34730	SSF46689	Homeodomain-like
CNE_1c34730	SSF48498	Tetracyclin repressor-like, C-terminal domain
CNE_1c34740	SSF51735	NAD(P)-binding Rossmann-fold domains
CNE_1c34750	SSF52218	Flavoproteins
CNE_1c34760	SSF55729	Acyl-CoA N-acyltransferases (Nat)
CNE_1c34770	SSF46785	"Winged helix" DNA-binding domain
CNE_1c34770	SSF54909	Dimeric alpha+beta barrel
CNE_1c34780	SSF47473	EF-hand
CNE_1c34800	SSF46458	Globin-like
CNE_1c34800	SSF52343	Ferredoxin reductase-like, C-terminal NADP-linked domain
CNE_1c34800	SSF63380	Riboflavin synthase domain-like
CNE_1c34810	SSF46785	"Winged helix" DNA-binding domain
CNE_1c34820	SSF54523	Pili subunits
CNE_1c34830	SSF54523	Pili subunits
CNE_1c34840	SSF54523	Pili subunits
CNE_1c34860	SSF158544	GspK insert domain-like
CNE_1c34860	SSF54523	Pili subunits
CNE_1c34870	SSF53067	Actin-like ATPase domain
CNE_1c34880	SSF103054	General secretion pathway protein M, EpsM
CNE_1c34910	SSF160246	EspE N-terminal domain-like
CNE_1c34910	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CNE_1c34950	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
CNE_1c34950	SSF53323	Pyruvate-ferredoxin oxidoreductase, PFOR, domain III
CNE_1c34960	SSF109604	HD-domain/PDEase-like
CNE_1c34970	SSF55729	Acyl-CoA N-acyltransferases (Nat)
CNE_1c34980	SSF51316	Mss4-like
CNE_1c34990	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
CNE_1c35000	SSF103473	MFS general substrate transporter
CNE_1c35010	SSF103473	MFS general substrate transporter
CNE_1c35020	SSF53213	LigB-like
CNE_1c35040	SSF103515	Autotransporter
CNE_1c35050	SSF103473	MFS general substrate transporter
CNE_1c35060	SSF56672	DNA/RNA polymerases
CNE_1c35080	SSF48150	DNA-glycosylase
CNE_1c35090	SSF160240	Cation efflux protein cytoplasmic domain-like
CNE_1c35090	SSF161111	Cation efflux protein transmembrane domain-like
CNE_1c35130	SSF55816	5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain
CNE_1c35130	SSF56300	Metallo-dependent phosphatases
CNE_1c35140	SSF52833	Thioredoxin-like
CNE_1c35150	SSF46626	Cytochrome c
CNE_1c35160	SSF46626	Cytochrome c
CNE_1c35170	SSF75169	DsrEFH-like
CNE_1c35180	SSF81296	E set domains
CNE_1c35200	SSF46626	Cytochrome c
CNE_1c35210	SSF46626	Cytochrome c
CNE_1c35220	SSF56524	Oxidoreductase molybdopterin-binding domain
CNE_1c35220	SSF81296	E set domains
CNE_1c35230	SSF46785	"Winged helix" DNA-binding domain
CNE_1c35240	SSF103481	Multidrug resistance efflux transporter EmrE
CNE_1c35250	SSF51905	FAD/NAD(P)-binding domain
CNE_1c35250	SSF55424	FAD/NAD-linked reductases, dimerisation (C-terminal) domain
CNE_1c35260	SSF46626	Cytochrome c
CNE_1c35280	SSF53697	SIS domain
CNE_1c35290	SSF52980	Restriction endonuclease-like
CNE_1c35300	SSF53790	Tetrapyrrole methylase
CNE_1c35310	SSF50685	Barwin-like endoglucanases
CNE_1c35320	SSF56281	Metallo-hydrolase/oxidoreductase
CNE_1c35330	SSF53098	Ribonuclease H-like
CNE_1c35350	SSF52833	Thioredoxin-like
CNE_1c35360	SSF55729	Acyl-CoA N-acyltransferases (Nat)
CNE_1c35370	SSF53187	Zn-dependent exopeptidases
CNE_1c35370	SSF55031	Bacterial exopeptidase dimerisation domain
CNE_1c35380	SSF53187	Zn-dependent exopeptidases
CNE_1c35380	SSF55031	Bacterial exopeptidase dimerisation domain
CNE_1c35390	SSF118215	Proton glutamate symport protein
CNE_1c35400	SSF46785	"Winged helix" DNA-binding domain
CNE_1c35400	SSF48008	GntR ligand-binding domain-like
CNE_1c35410	SSF51735	NAD(P)-binding Rossmann-fold domains
CNE_1c35420	SSF52096	ClpP/crotonase
CNE_1c35430	SSF52096	ClpP/crotonase
CNE_1c35450	SSF46785	"Winged helix" DNA-binding domain
CNE_1c35450	SSF53850	Periplasmic binding protein-like II
CNE_1c35470	SSF52467	DHS-like NAD/FAD-binding domain
CNE_1c35470	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
CNE_1c35480	SSF51658	Xylose isomerase-like
CNE_1c35490	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
CNE_1c35490	SSF51735	NAD(P)-binding Rossmann-fold domains
CNE_1c35500	SSF82544	GckA/TtuD-like
CNE_1c35510	SSF50800	PK beta-barrel domain-like
CNE_1c35510	SSF51621	Phosphoenolpyruvate/pyruvate domain
CNE_1c35510	SSF52935	PK C-terminal domain-like
CNE_1c35530	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
CNE_1c35530	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
CNE_1c35530	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
CNE_1c35550	SSF54534	FKBP-like
CNE_1c35560	SSF46955	Putative DNA-binding domain
CNE_1c35590	SSF75620	Release factor
CNE_1c35600	SSF50249	Nucleic acid-binding proteins
CNE_1c35620	SSF46626	Cytochrome c
CNE_1c35630	SSF102114	Radical SAM enzymes
CNE_1c35640	SSF53822	Periplasmic binding protein-like I
CNE_1c35650	SSF47384	Homodimeric domain of signal transducing histidine kinase
CNE_1c35650	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
CNE_1c35660	SSF46894	C-terminal effector domain of the bipartite response regulators
CNE_1c35660	SSF52172	CheY-like
CNE_1c35680	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CNE_1c35700	SSF101790	Aminomethyltransferase beta-barrel domain
CNE_1c35700	SSF103025	Folate-binding domain
CNE_1c35710	SSF51230	Single hybrid motif
CNE_1c35720	SSF53383	PLP-dependent transferases
CNE_1c35730	SSF143548	Serine metabolism enzymes domain
CNE_1c35740	SSF56281	Metallo-hydrolase/oxidoreductase
CNE_1c35750	SSF82784	OsmC-like
CNE_1c35760	SSF53474	alpha/beta-Hydrolases
CNE_1c35780	SSF55931	Glutamine synthetase/guanido kinase
CNE_1c35800	SSF48452	TPR-like
CNE_1c35810	SSF53822	Periplasmic binding protein-like I
CNE_1c35820	SSF47598	Ribbon-helix-helix
CNE_1c35820	SSF51730	FAD-linked oxidoreductase
CNE_1c35820	SSF53720	ALDH-like
CNE_1c35820	SSF81935	N-terminal domain of bifunctional PutA protein
CNE_1c35830	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CNE_1c35840	SSF51726	UROD/MetE-like
CNE_1c35850	SSF53474	alpha/beta-Hydrolases
CNE_1c35860	SSF51735	NAD(P)-binding Rossmann-fold domains
CNE_1c35870	SSF46604	Epsilon subunit of F1F0-ATP synthase C-terminal domain
CNE_1c35870	SSF51344	Epsilon subunit of F1F0-ATP synthase N-terminal domain
CNE_1c35880	SSF47917	C-terminal domain of alpha and beta subunits of F1 ATP synthase
CNE_1c35880	SSF50615	N-terminal domain of alpha and beta subunits of F1 ATP synthase
CNE_1c35880	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CNE_1c35890	SSF52943	ATP synthase (F1-ATPase), gamma subunit
CNE_1c35900	SSF47917	C-terminal domain of alpha and beta subunits of F1 ATP synthase
CNE_1c35900	SSF50615	N-terminal domain of alpha and beta subunits of F1 ATP synthase
CNE_1c35900	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CNE_1c35910	SSF47928	N-terminal domain of the delta subunit of the F1F0-ATP synthase
CNE_1c35920	SSF81573	F1F0 ATP synthase subunit B, membrane domain
CNE_1c35930	SSF81333	F1F0 ATP synthase subunit C
CNE_1c35940	SSF81336	F1F0 ATP synthase subunit A
CNE_1c35960	SSF109709	KorB DNA-binding domain-like
CNE_1c35960	SSF110849	ParB/Sulfiredoxin
CNE_1c35970	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CNE_1c35980	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
CNE_1c35990	SSF51905	FAD/NAD(P)-binding domain
CNE_1c36000	SSF53187	Zn-dependent exopeptidases
CNE_1c36010	SSF53850	Periplasmic binding protein-like II
CNE_1c36020	SSF46785	"Winged helix" DNA-binding domain
CNE_1c36020	SSF53850	Periplasmic binding protein-like II
CNE_1c36030	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CNE_1c36040	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CNE_1c36060	SSF53822	Periplasmic binding protein-like I
CNE_1c36110	SSF53822	Periplasmic binding protein-like I
CNE_1c36120	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CNE_1c36130	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CNE_1c36140	SSF51905	FAD/NAD(P)-binding domain
CNE_1c36140	SSF54373	FAD-linked reductases, C-terminal domain
CNE_1c36150	SSF53720	ALDH-like
CNE_1c36160	SSF53474	alpha/beta-Hydrolases
CNE_1c36170	SSF46955	Putative DNA-binding domain
CNE_1c36180	SSF55008	HMA, heavy metal-associated domain
CNE_1c36180	SSF56784	HAD-like
CNE_1c36180	SSF81653	Calcium ATPase, transduction domain A
CNE_1c36180	SSF81665	Calcium ATPase, transmembrane domain M
CNE_1c36190	SSF55008	HMA, heavy metal-associated domain
CNE_1c36200	SSF56925	OMPA-like
CNE_1c36210	SSF55718	SCP-like
CNE_1c36210	SSF56281	Metallo-hydrolase/oxidoreductase
CNE_1c36220	SSF46689	Homeodomain-like
CNE_1c36220	SSF48498	Tetracyclin repressor-like, C-terminal domain
CNE_1c36230	SSF51735	NAD(P)-binding Rossmann-fold domains
CNE_1c36240	SSF51430	NAD(P)-linked oxidoreductase
CNE_1c36250	SSF46785	"Winged helix" DNA-binding domain
CNE_1c36250	SSF53850	Periplasmic binding protein-like II
CNE_1c36260	SSF53955	Lysozyme-like
CNE_1c36260	SSF56601	beta-lactamase/transpeptidase-like
CNE_1c36290	SSF46785	"Winged helix" DNA-binding domain
CNE_1c36290	SSF54909	Dimeric alpha+beta barrel
CNE_1c36300	SSF56534	Aromatic aminoacid monoxygenases, catalytic and oligomerization domains
CNE_1c36310	SSF55248	PCD-like
CNE_1c36320	SSF46894	C-terminal effector domain of the bipartite response regulators
CNE_1c36320	SSF52172	CheY-like
CNE_1c36330	SSF47384	Homodimeric domain of signal transducing histidine kinase
CNE_1c36330	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
CNE_1c36340	SSF82199	SET domain
CNE_1c36350	SSF47729	IHF-like DNA-binding proteins
CNE_1c36370	SSF100879	Lesion bypass DNA polymerase (Y-family), little finger domain
CNE_1c36370	SSF56672	DNA/RNA polymerases
CNE_1c36380	SSF103481	Multidrug resistance efflux transporter EmrE
CNE_1c36390	SSF53850	Periplasmic binding protein-like II
CNE_1c36400	SSF56935	Porins
CNE_1c36410	SSF81338	Aquaporin-like
CNE_1c36450	SSF46689	Homeodomain-like
CNE_1c36450	SSF52172	CheY-like
CNE_1c36460	SSF158472	HAMP domain-like
CNE_1c36460	SSF47384	Homodimeric domain of signal transducing histidine kinase
CNE_1c36460	SSF55785	PYP-like sensor domain (PAS domain)
CNE_1c36460	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
CNE_1c36480	SSF48013	NusB-like
CNE_1c36480	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
CNE_1c36500	SSF50486	FMT C-terminal domain-like
CNE_1c36500	SSF53328	Formyltransferase
CNE_1c36510	SSF56420	Peptide deformylase
CNE_1c36520	SSF54106	LysM domain
CNE_1c36540	SSF52833	Thioredoxin-like
CNE_1c36550	SSF56712	Prokaryotic type I DNA topoisomerase
CNE_1c36560	SSF46785	"Winged helix" DNA-binding domain
CNE_1c36560	SSF53850	Periplasmic binding protein-like II
CNE_1c36610	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
CNE_1c36620	SSF46894	C-terminal effector domain of the bipartite response regulators
CNE_1c36620	SSF52172	CheY-like
CNE_1c36630	SSF53795	PEP carboxykinase-like
CNE_1c36630	SSF68923	PEP carboxykinase N-terminal domain
CNE_1c36650	SSF51735	NAD(P)-binding Rossmann-fold domains
CNE_1c36650	SSF52283	Formate/glycerate dehydrogenase catalytic domain-like
CNE_1c36660	SSF103473	MFS general substrate transporter
CNE_1c36670	SSF50800	PK beta-barrel domain-like
CNE_1c36680	SSF111369	HlyD-like secretion proteins
CNE_1c36690	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
CNE_1c36690	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
CNE_1c36690	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
CNE_1c36700	SSF159501	EreA/ChaN-like
CNE_1c36710	SSF53850	Periplasmic binding protein-like II
CNE_1c36750	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
CNE_1c36760	SSF52151	FabD/lysophospholipase-like
CNE_1c36770	SSF51905	FAD/NAD(P)-binding domain
CNE_1c36770	SSF55424	FAD/NAD-linked reductases, dimerisation (C-terminal) domain
CNE_1c36780	SSF47384	Homodimeric domain of signal transducing histidine kinase
CNE_1c36780	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
CNE_1c36790	SSF46894	C-terminal effector domain of the bipartite response regulators
CNE_1c36790	SSF52172	CheY-like
CNE_1c36800	SSF53850	Periplasmic binding protein-like II
CNE_1c36810	SSF46689	Homeodomain-like
CNE_1c36810	SSF48498	Tetracyclin repressor-like, C-terminal domain
CNE_1c36820	SSF111369	HlyD-like secretion proteins
CNE_1c36830	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
CNE_1c36830	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
CNE_1c36830	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
CNE_1c36840	SSF56954	Outer membrane efflux proteins (OEP)
CNE_1c36850	SSF56925	OMPA-like
CNE_1c36890	SSF46689	Homeodomain-like
CNE_1c36890	SSF48498	Tetracyclin repressor-like, C-terminal domain
CNE_1c36900	SSF51905	FAD/NAD(P)-binding domain
CNE_1c36920	SSF46689	Homeodomain-like
CNE_1c36930	SSF51905	FAD/NAD(P)-binding domain
CNE_1c36940	SSF51735	NAD(P)-binding Rossmann-fold domains
CNE_1c36950	SSF53474	alpha/beta-Hydrolases
CNE_1c36970	SSF57802	Rubredoxin-like
CNE_1c37000	SSF54211	Ribosomal protein S5 domain 2-like