pRALTA_0001 methyltransferase IPR029063 - S-adenosyl-L-methionine-dependent methyltransferase-like pRALTA_0002 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase pRALTA_0002 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase pRALTA_0002 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase pRALTA_0002 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase pRALTA_0006 methyltransferase IPR029063 - S-adenosyl-L-methionine-dependent methyltransferase-like pRALTA_0009 ribonuclease IPR012337 - Ribonuclease H-like domain pRALTA_0010 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase pRALTA_0010 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase pRALTA_0010 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase pRALTA_0010 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase pRALTA_0016 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase pRALTA_0016 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase pRALTA_0016 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase pRALTA_0016 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase pRALTA_0023 hydrolase IPR016035 - Acyl transferase/acyl hydrolase/lysophospholipase pRALTA_0023 acyl IPR016035 - Acyl transferase/acyl hydrolase/lysophospholipase pRALTA_0023 acyl IPR016035 - Acyl transferase/acyl hydrolase/lysophospholipase pRALTA_0023 transferase IPR016035 - Acyl transferase/acyl hydrolase/lysophospholipase pRALTA_0030 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase pRALTA_0030 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase pRALTA_0030 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase pRALTA_0030 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase pRALTA_0040 fold IPR029058 - Alpha/Beta hydrolase fold pRALTA_0040 hydrolase IPR029058 - Alpha/Beta hydrolase fold pRALTA_0040 beta IPR029058 - Alpha/Beta hydrolase fold pRALTA_0040 alpha IPR029058 - Alpha/Beta hydrolase fold pRALTA_0041 regulator IPR015893 - Tetracycline transcriptional regulator, TetR-like, C-terminal pRALTA_0041 transcriptional IPR015893 - Tetracycline transcriptional regulator, TetR-like, C-terminal pRALTA_0041 c-terminal IPR015893 - Tetracycline transcriptional regulator, TetR-like, C-terminal pRALTA_0049 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase pRALTA_0049 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase pRALTA_0049 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase pRALTA_0049 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase pRALTA_0052 reductase IPR002347 - Glucose/ribitol dehydrogenase pRALTA_0052 dehydrogenase IPR002347 - Glucose/ribitol dehydrogenase pRALTA_0063 hydrolase IPR016035 - Acyl transferase/acyl hydrolase/lysophospholipase pRALTA_0063 acyl IPR016035 - Acyl transferase/acyl hydrolase/lysophospholipase pRALTA_0063 acyl IPR016035 - Acyl transferase/acyl hydrolase/lysophospholipase pRALTA_0063 transferase IPR016035 - Acyl transferase/acyl hydrolase/lysophospholipase pRALTA_0068 porin IPR023614 - Porin domain pRALTA_0072 dna-binding IPR011991 - Winged helix-turn-helix DNA-binding domain pRALTA_0073 domain-like IPR029060 - PIN domain-like pRALTA_0075 shock IPR011129 - Cold shock protein pRALTA_0076 endonuclease IPR011335 - Restriction endonuclease type II-like pRALTA_0076 trna IPR011856 - tRNA endonuclease-like domain pRALTA_0080 reductase IPR002347 - Glucose/ribitol dehydrogenase pRALTA_0080 dehydrogenase IPR002347 - Glucose/ribitol dehydrogenase pRALTA_0082 dna-binding IPR011991 - Winged helix-turn-helix DNA-binding domain pRALTA_0082 fold IPR014710 - RmlC-like jelly roll fold pRALTA_0083 regulator IPR015893 - Tetracycline transcriptional regulator, TetR-like, C-terminal pRALTA_0083 transcriptional IPR015893 - Tetracycline transcriptional regulator, TetR-like, C-terminal pRALTA_0083 c-terminal IPR015893 - Tetracycline transcriptional regulator, TetR-like, C-terminal pRALTA_0084 esterase IPR011118 - Tannase/feruloyl esterase pRALTA_0084 fold IPR029058 - Alpha/Beta hydrolase fold pRALTA_0084 hydrolase IPR029058 - Alpha/Beta hydrolase fold pRALTA_0084 beta IPR029058 - Alpha/Beta hydrolase fold pRALTA_0084 alpha IPR029058 - Alpha/Beta hydrolase fold pRALTA_0093 small IPR002755 - DNA primase, small subunit pRALTA_0093 dna IPR002755 - DNA primase, small subunit pRALTA_0093 dna IPR014145 - DNA polymerase LigD, polymerase domain pRALTA_0093 polymerase IPR014145 - DNA polymerase LigD, polymerase domain pRALTA_0093 ligase IPR014145 - DNA polymerase LigD, polymerase domain pRALTA_0098 dna-binding IPR011991 - Winged helix-turn-helix DNA-binding domain pRALTA_0099 alpha IPR004805 - DNA polymerase III, alpha subunit pRALTA_0099 dna IPR004805 - DNA polymerase III, alpha subunit pRALTA_0099 polymerase IPR004805 - DNA polymerase III, alpha subunit pRALTA_0099 polymerase IPR016195 - Polymerase/histidinol phosphatase-like pRALTA_0099 phosphatase-like IPR016195 - Polymerase/histidinol phosphatase-like pRALTA_0101 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase pRALTA_0101 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase pRALTA_0101 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase pRALTA_0101 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase pRALTA_0111 dna-binding IPR011991 - Winged helix-turn-helix DNA-binding domain pRALTA_0123 dna-binding IPR010982 - Lambda repressor-like, DNA-binding domain pRALTA_0136 replication IPR010921 - Trp repressor/replication initiator pRALTA_0136 repressor IPR010921 - Trp repressor/replication initiator pRALTA_0140 enzyme IPR011010 - DNA breaking-rejoining enzyme, catalytic core pRALTA_0140 catalytic IPR011010 - DNA breaking-rejoining enzyme, catalytic core pRALTA_0140 core IPR011010 - DNA breaking-rejoining enzyme, catalytic core pRALTA_0140 dna IPR011010 - DNA breaking-rejoining enzyme, catalytic core pRALTA_0140 catalytic IPR013762 - Integrase-like, catalytic core pRALTA_0147 enzyme IPR011010 - DNA breaking-rejoining enzyme, catalytic core pRALTA_0147 catalytic IPR011010 - DNA breaking-rejoining enzyme, catalytic core pRALTA_0147 core IPR011010 - DNA breaking-rejoining enzyme, catalytic core pRALTA_0147 dna IPR011010 - DNA breaking-rejoining enzyme, catalytic core pRALTA_0147 catalytic IPR013762 - Integrase-like, catalytic core pRALTA_0149 dna-binding IPR000119 - Histone-like bacterial DNA-binding protein pRALTA_0154 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase pRALTA_0154 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase pRALTA_0154 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase pRALTA_0154 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase pRALTA_0156 phosphatase-like IPR029052 - Metallo-dependent phosphatase-like pRALTA_0171 unknown IPR011101 - Burkholderia phage phiE125, Gp37 pRALTA_0172 methyltransferase IPR029063 - S-adenosyl-L-methionine-dependent methyltransferase-like pRALTA_0175 dna IPR001604 - DNA/RNA non-specific endonuclease pRALTA_0175 rna IPR001604 - DNA/RNA non-specific endonuclease pRALTA_0175 endonuclease IPR001604 - DNA/RNA non-specific endonuclease pRALTA_0176 dna IPR001604 - DNA/RNA non-specific endonuclease pRALTA_0176 rna IPR001604 - DNA/RNA non-specific endonuclease pRALTA_0176 endonuclease IPR001604 - DNA/RNA non-specific endonuclease pRALTA_0178 dna-binding IPR000119 - Histone-like bacterial DNA-binding protein pRALTA_0179 enzyme IPR011010 - DNA breaking-rejoining enzyme, catalytic core pRALTA_0179 catalytic IPR011010 - DNA breaking-rejoining enzyme, catalytic core pRALTA_0179 core IPR011010 - DNA breaking-rejoining enzyme, catalytic core pRALTA_0179 dna IPR011010 - DNA breaking-rejoining enzyme, catalytic core pRALTA_0179 catalytic IPR013762 - Integrase-like, catalytic core pRALTA_0188 dna-binding IPR000424 - Primosome PriB/single-strand DNA-binding pRALTA_0205 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase pRALTA_0205 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase pRALTA_0205 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase pRALTA_0205 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase pRALTA_0209 secretion IPR004846 - Type II/III secretion system pRALTA_0216 transfer IPR010258 - Conjugal transfer, TrbG/VirB9/CagX pRALTA_0218 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase pRALTA_0218 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase pRALTA_0218 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase pRALTA_0218 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase pRALTA_0221 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase pRALTA_0221 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase pRALTA_0221 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase pRALTA_0221 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase pRALTA_0223 transfer IPR007688 - Conjugal transfer, TrbL/VirB6 pRALTA_0223 plasmid IPR007688 - Conjugal transfer, TrbL/VirB6 pRALTA_0224 putative IPR011119 - Uncharacterised domain, helicase/relaxase, putative pRALTA_0224 helicase IPR011119 - Uncharacterised domain, helicase/relaxase, putative pRALTA_0224 uncharacterised IPR011119 - Uncharacterised domain, helicase/relaxase, putative pRALTA_0225 conjugative IPR022458 - Conjugative coupling factor TraG/TraD pRALTA_0225 factor IPR022458 - Conjugative coupling factor TraG/TraD pRALTA_0225 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase pRALTA_0225 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase pRALTA_0225 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase pRALTA_0225 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase pRALTA_0230 dna IPR000212 - DNA helicase, UvrD/REP type pRALTA_0230 helicase IPR000212 - DNA helicase, UvrD/REP type pRALTA_0230 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase pRALTA_0230 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase pRALTA_0230 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase pRALTA_0230 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase pRALTA_0235 ribonuclease IPR012337 - Ribonuclease H-like domain pRALTA_0235 c-terminal IPR014737 - Transposase, Tn5-like, C-terminal pRALTA_0236 fold IPR029058 - Alpha/Beta hydrolase fold pRALTA_0236 hydrolase IPR029058 - Alpha/Beta hydrolase fold pRALTA_0236 beta IPR029058 - Alpha/Beta hydrolase fold pRALTA_0236 alpha IPR029058 - Alpha/Beta hydrolase fold pRALTA_0238 efflux IPR003423 - Outer membrane efflux protein pRALTA_0238 outer IPR003423 - Outer membrane efflux protein pRALTA_0238 membrane IPR003423 - Outer membrane efflux protein pRALTA_0239 membrane IPR006143 - RND efflux pump, membrane fusion protein pRALTA_0239 efflux IPR006143 - RND efflux pump, membrane fusion protein pRALTA_0239 pump IPR006143 - RND efflux pump, membrane fusion protein pRALTA_0240 abc IPR003439 - ABC transporter-like pRALTA_0240 peptidase IPR005074 - Peptidase C39, bacteriocin processing pRALTA_0240 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase pRALTA_0240 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase pRALTA_0240 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase pRALTA_0240 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase pRALTA_0246 dna-binding IPR011991 - Winged helix-turn-helix DNA-binding domain pRALTA_0247 dna-binding IPR011991 - Winged helix-turn-helix DNA-binding domain pRALTA_0248 ribonuclease IPR012337 - Ribonuclease H-like domain pRALTA_0250 glycoside IPR013319 - Glycoside hydrolase, family 11/12 pRALTA_0250 hydrolase IPR013319 - Glycoside hydrolase, family 11/12 pRALTA_0250 lectin IPR013320 - Concanavalin A-like lectin/glucanase, subgroup pRALTA_0253 ribonuclease IPR012337 - Ribonuclease H-like domain pRALTA_0256 ribonuclease IPR012337 - Ribonuclease H-like domain pRALTA_0257 replication IPR010921 - Trp repressor/replication initiator pRALTA_0257 repressor IPR010921 - Trp repressor/replication initiator pRALTA_0259 ribonuclease IPR012337 - Ribonuclease H-like domain pRALTA_0259 c-terminal IPR014737 - Transposase, Tn5-like, C-terminal pRALTA_0265 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase pRALTA_0265 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase pRALTA_0265 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase pRALTA_0265 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase pRALTA_0271 ribonuclease IPR012337 - Ribonuclease H-like domain pRALTA_0271 c-terminal IPR014737 - Transposase, Tn5-like, C-terminal pRALTA_0273 cation IPR002524 - Cation efflux protein pRALTA_0273 efflux IPR002524 - Cation efflux protein pRALTA_0276 ribonuclease IPR012337 - Ribonuclease H-like domain pRALTA_0276 c-terminal IPR014737 - Transposase, Tn5-like, C-terminal pRALTA_0280 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase pRALTA_0280 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase pRALTA_0280 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase pRALTA_0280 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase pRALTA_0281 ribonuclease IPR012337 - Ribonuclease H-like domain pRALTA_0284 ribonuclease IPR012337 - Ribonuclease H-like domain pRALTA_0287 protein-like IPR028082 - Periplasmic binding protein-like I pRALTA_0287 periplasmic IPR028082 - Periplasmic binding protein-like I pRALTA_0287 binding IPR028082 - Periplasmic binding protein-like I pRALTA_0288 c-terminal IPR003594 - Histidine kinase-like ATPase, C-terminal domain pRALTA_0288 atpase IPR003594 - Histidine kinase-like ATPase, C-terminal domain pRALTA_0288 histidine IPR003594 - Histidine kinase-like ATPase, C-terminal domain pRALTA_0288 kinase-like IPR003594 - Histidine kinase-like ATPase, C-terminal domain pRALTA_0290 dna-binding IPR011991 - Winged helix-turn-helix DNA-binding domain pRALTA_0296 ribonuclease IPR012337 - Ribonuclease H-like domain pRALTA_0297 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase pRALTA_0297 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase pRALTA_0297 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase pRALTA_0297 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase pRALTA_0301 enzyme IPR011010 - DNA breaking-rejoining enzyme, catalytic core pRALTA_0301 catalytic IPR011010 - DNA breaking-rejoining enzyme, catalytic core pRALTA_0301 core IPR011010 - DNA breaking-rejoining enzyme, catalytic core pRALTA_0301 dna IPR011010 - DNA breaking-rejoining enzyme, catalytic core pRALTA_0301 catalytic IPR013762 - Integrase-like, catalytic core pRALTA_0307 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase pRALTA_0307 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase pRALTA_0307 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase pRALTA_0307 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase pRALTA_0310 dna-binding IPR011991 - Winged helix-turn-helix DNA-binding domain pRALTA_0311 dna-binding IPR011991 - Winged helix-turn-helix DNA-binding domain pRALTA_0314 methyltransferase IPR007318 - Phospholipid methyltransferase pRALTA_0316 transporter IPR000292 - Formate/nitrite transporter pRALTA_0322 barrel IPR012349 - FMN-binding split barrel pRALTA_0325 solute IPR001734 - Sodium/solute symporter pRALTA_0325 sodium IPR001734 - Sodium/solute symporter pRALTA_0325 symporter IPR001734 - Sodium/solute symporter pRALTA_0326 synthase IPR002180 - 6,7-dimethyl-8-ribityllumazine synthase pRALTA_0327 acyl-coa IPR016181 - Acyl-CoA N-acyltransferase pRALTA_0328 major IPR020846 - Major facilitator superfamily domain pRALTA_0330 major IPR011701 - Major facilitator superfamily pRALTA_0330 major IPR020846 - Major facilitator superfamily domain pRALTA_0332 dna-binding IPR011991 - Winged helix-turn-helix DNA-binding domain pRALTA_0332 rna IPR013324 - RNA polymerase sigma factor, region 3/4 pRALTA_0332 factor IPR013324 - RNA polymerase sigma factor, region 3/4 pRALTA_0332 sigma IPR013324 - RNA polymerase sigma factor, region 3/4 pRALTA_0332 polymerase IPR013324 - RNA polymerase sigma factor, region 3/4 pRALTA_0333 ribonuclease IPR012337 - Ribonuclease H-like domain pRALTA_0334 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase pRALTA_0334 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase pRALTA_0334 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase pRALTA_0334 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase pRALTA_0339 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase pRALTA_0339 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase pRALTA_0339 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase pRALTA_0339 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase pRALTA_0340 ribonuclease IPR012337 - Ribonuclease H-like domain pRALTA_0343 ribonuclease IPR012337 - Ribonuclease H-like domain pRALTA_0344 replication IPR010921 - Trp repressor/replication initiator pRALTA_0344 repressor IPR010921 - Trp repressor/replication initiator pRALTA_0346 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase pRALTA_0346 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase pRALTA_0346 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase pRALTA_0346 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase pRALTA_0347 ribonuclease IPR012337 - Ribonuclease H-like domain pRALTA_0348 dna-binding IPR011991 - Winged helix-turn-helix DNA-binding domain pRALTA_0348 rna IPR013324 - RNA polymerase sigma factor, region 3/4 pRALTA_0348 factor IPR013324 - RNA polymerase sigma factor, region 3/4 pRALTA_0348 sigma IPR013324 - RNA polymerase sigma factor, region 3/4 pRALTA_0348 polymerase IPR013324 - RNA polymerase sigma factor, region 3/4 pRALTA_0352 ribonuclease IPR012337 - Ribonuclease H-like domain pRALTA_0352 c-terminal IPR014737 - Transposase, Tn5-like, C-terminal pRALTA_0354 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase pRALTA_0354 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase pRALTA_0354 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase pRALTA_0354 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase pRALTA_0356 methyltransferase IPR008715 - SAM-dependent methyltransferase, NodS-related pRALTA_0356 methyltransferase IPR029063 - S-adenosyl-L-methionine-dependent methyltransferase-like pRALTA_0359 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase pRALTA_0359 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase pRALTA_0359 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase pRALTA_0359 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase pRALTA_0360 transporter IPR000412 - ABC-2 transporter pRALTA_0361 abc IPR003439 - ABC transporter-like pRALTA_0361 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase pRALTA_0361 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase pRALTA_0361 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase pRALTA_0361 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase pRALTA_0362 synthase IPR026107 - Hyaluronan synthase/nodulation protein C pRALTA_0363 glycoside IPR011330 - Glycoside hydrolase/deacetylase, beta/alpha-barrel pRALTA_0363 hydrolase IPR011330 - Glycoside hydrolase/deacetylase, beta/alpha-barrel pRALTA_0363 beta IPR011330 - Glycoside hydrolase/deacetylase, beta/alpha-barrel pRALTA_0364 dna-binding IPR011991 - Winged helix-turn-helix DNA-binding domain pRALTA_0366 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase pRALTA_0366 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase pRALTA_0366 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase pRALTA_0366 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase pRALTA_0366 domain-like IPR029016 - GAF domain-like pRALTA_0368 ribonuclease IPR012337 - Ribonuclease H-like domain pRALTA_0374 cofactor IPR003731 - Dinitrogenase iron-molybdenum cofactor biosynthesis pRALTA_0374 biosynthesis IPR003731 - Dinitrogenase iron-molybdenum cofactor biosynthesis pRALTA_0380 transfer IPR001308 - Electron transfer flavoprotein, alpha subunit pRALTA_0380 alpha IPR001308 - Electron transfer flavoprotein, alpha subunit pRALTA_0380 flavoprotein IPR001308 - Electron transfer flavoprotein, alpha subunit pRALTA_0380 electron IPR001308 - Electron transfer flavoprotein, alpha subunit pRALTA_0380 fold IPR014729 - Rossmann-like alpha/beta/alpha sandwich fold pRALTA_0380 alpha IPR014729 - Rossmann-like alpha/beta/alpha sandwich fold pRALTA_0380 beta IPR014729 - Rossmann-like alpha/beta/alpha sandwich fold pRALTA_0380 alpha IPR014729 - Rossmann-like alpha/beta/alpha sandwich fold pRALTA_0381 flavoprotein IPR012255 - Electron transfer flavoprotein, beta subunit pRALTA_0381 electron IPR012255 - Electron transfer flavoprotein, beta subunit pRALTA_0381 beta IPR012255 - Electron transfer flavoprotein, beta subunit pRALTA_0381 transfer IPR012255 - Electron transfer flavoprotein, beta subunit pRALTA_0381 fold IPR014729 - Rossmann-like alpha/beta/alpha sandwich fold pRALTA_0381 alpha IPR014729 - Rossmann-like alpha/beta/alpha sandwich fold pRALTA_0381 beta IPR014729 - Rossmann-like alpha/beta/alpha sandwich fold pRALTA_0381 alpha IPR014729 - Rossmann-like alpha/beta/alpha sandwich fold pRALTA_0383 barrel IPR013785 - Aldolase-type TIM barrel pRALTA_0384 cofactor IPR003731 - Dinitrogenase iron-molybdenum cofactor biosynthesis pRALTA_0384 biosynthesis IPR003731 - Dinitrogenase iron-molybdenum cofactor biosynthesis pRALTA_0384 radical IPR007197 - Radical SAM pRALTA_0384 barrel IPR013785 - Aldolase-type TIM barrel pRALTA_0390 reductase IPR000392 - Nitrogenase iron protein, subunit NifH/Protochlorophyllide reductase, subunit ChlL pRALTA_0390 iron IPR000392 - Nitrogenase iron protein, subunit NifH/Protochlorophyllide reductase, subunit ChlL pRALTA_0390 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase pRALTA_0390 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase pRALTA_0390 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase pRALTA_0390 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase pRALTA_0391 chain IPR010143 - Nitrogenase component 1, alpha chain pRALTA_0391 alpha IPR010143 - Nitrogenase component 1, alpha chain pRALTA_0391 component IPR010143 - Nitrogenase component 1, alpha chain pRALTA_0394 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase pRALTA_0394 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase pRALTA_0394 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase pRALTA_0394 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase pRALTA_0395 transferase IPR015424 - Pyridoxal phosphate-dependent transferase pRALTA_0396 c-terminal IPR011766 - Thiamine pyrophosphate enzyme, C-terminal TPP-binding pRALTA_0396 enzyme IPR011766 - Thiamine pyrophosphate enzyme, C-terminal TPP-binding pRALTA_0396 thiamine IPR011766 - Thiamine pyrophosphate enzyme, C-terminal TPP-binding pRALTA_0396 thiamine IPR012001 - Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain pRALTA_0396 enzyme IPR012001 - Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain pRALTA_0398 enzyme IPR008279 - PEP-utilising enzyme, mobile domain pRALTA_0398 subdomain IPR013816 - ATP-grasp fold, subdomain 2 pRALTA_0398 fold IPR013816 - ATP-grasp fold, subdomain 2 pRALTA_0406 membrane IPR006143 - RND efflux pump, membrane fusion protein pRALTA_0406 efflux IPR006143 - RND efflux pump, membrane fusion protein pRALTA_0406 pump IPR006143 - RND efflux pump, membrane fusion protein pRALTA_0407 resistance IPR001036 - Acriflavin resistance protein pRALTA_0413 ribonuclease IPR012337 - Ribonuclease H-like domain pRALTA_0413 c-terminal IPR014737 - Transposase, Tn5-like, C-terminal pRALTA_0415 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase pRALTA_0415 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase pRALTA_0415 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase pRALTA_0415 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase pRALTA_0416 replication IPR010921 - Trp repressor/replication initiator pRALTA_0416 repressor IPR010921 - Trp repressor/replication initiator pRALTA_0418 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase pRALTA_0418 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase pRALTA_0418 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase pRALTA_0418 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase pRALTA_0419 ribonuclease IPR012337 - Ribonuclease H-like domain pRALTA_0425 esterase IPR010126 - Esterase, PHB depolymerase pRALTA_0425 fold IPR013783 - Immunoglobulin-like fold pRALTA_0425 fold IPR029058 - Alpha/Beta hydrolase fold pRALTA_0425 hydrolase IPR029058 - Alpha/Beta hydrolase fold pRALTA_0425 beta IPR029058 - Alpha/Beta hydrolase fold pRALTA_0425 alpha IPR029058 - Alpha/Beta hydrolase fold pRALTA_0426 ribonuclease IPR012337 - Ribonuclease H-like domain pRALTA_0426 c-terminal IPR014737 - Transposase, Tn5-like, C-terminal pRALTA_0431 dehydrogenase IPR016161 - Aldehyde/histidinol dehydrogenase pRALTA_0434 dna-binding IPR011991 - Winged helix-turn-helix DNA-binding domain pRALTA_0434 domain-like IPR029016 - GAF domain-like pRALTA_0436 dna-binding IPR010982 - Lambda repressor-like, DNA-binding domain pRALTA_0436 fold IPR014710 - RmlC-like jelly roll fold pRALTA_0438 ribonuclease IPR012337 - Ribonuclease H-like domain pRALTA_0439 replication IPR010921 - Trp repressor/replication initiator pRALTA_0439 repressor IPR010921 - Trp repressor/replication initiator pRALTA_0442 dehydrogenase IPR002085 - Alcohol dehydrogenase superfamily, zinc-type pRALTA_0443 abc IPR001851 - ABC transporter, permease pRALTA_0443 transporter IPR001851 - ABC transporter, permease pRALTA_0443 permease IPR001851 - ABC transporter, permease pRALTA_0446 replication IPR010921 - Trp repressor/replication initiator pRALTA_0446 repressor IPR010921 - Trp repressor/replication initiator pRALTA_0449 cytochrome IPR001128 - Cytochrome P450 pRALTA_0454 ribonuclease IPR012337 - Ribonuclease H-like domain pRALTA_0454 c-terminal IPR014737 - Transposase, Tn5-like, C-terminal pRALTA_0457 ribonuclease IPR012337 - Ribonuclease H-like domain pRALTA_0461 hydroxylase IPR003430 - Methane/phenol/toluene hydroxylase pRALTA_0466 hydroxylase IPR003430 - Methane/phenol/toluene hydroxylase pRALTA_0467 ribonuclease IPR012337 - Ribonuclease H-like domain pRALTA_0483 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase pRALTA_0483 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase pRALTA_0483 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase pRALTA_0483 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase pRALTA_0484 ribonuclease IPR012337 - Ribonuclease H-like domain pRALTA_0488 virulence IPR011050 - Pectin lyase fold/virulence factor pRALTA_0488 lyase IPR011050 - Pectin lyase fold/virulence factor pRALTA_0488 factor IPR011050 - Pectin lyase fold/virulence factor pRALTA_0488 fold IPR011050 - Pectin lyase fold/virulence factor pRALTA_0489 ribonuclease IPR012337 - Ribonuclease H-like domain pRALTA_0506 fold IPR029058 - Alpha/Beta hydrolase fold pRALTA_0506 hydrolase IPR029058 - Alpha/Beta hydrolase fold pRALTA_0506 beta IPR029058 - Alpha/Beta hydrolase fold pRALTA_0506 alpha IPR029058 - Alpha/Beta hydrolase fold pRALTA_0509 ribonuclease IPR012337 - Ribonuclease H-like domain pRALTA_0509 c-terminal IPR014737 - Transposase, Tn5-like, C-terminal pRALTA_0511 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase pRALTA_0511 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase pRALTA_0511 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase pRALTA_0511 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase pRALTA_0512 ribonuclease IPR012337 - Ribonuclease H-like domain pRALTA_0514 ribonuclease IPR012337 - Ribonuclease H-like domain pRALTA_0514 c-terminal IPR014737 - Transposase, Tn5-like, C-terminal pRALTA_0515 esterase IPR010126 - Esterase, PHB depolymerase pRALTA_0515 fold IPR013783 - Immunoglobulin-like fold pRALTA_0515 fold IPR029058 - Alpha/Beta hydrolase fold pRALTA_0515 hydrolase IPR029058 - Alpha/Beta hydrolase fold pRALTA_0515 beta IPR029058 - Alpha/Beta hydrolase fold pRALTA_0515 alpha IPR029058 - Alpha/Beta hydrolase fold pRALTA_0521 replication IPR010921 - Trp repressor/replication initiator pRALTA_0521 repressor IPR010921 - Trp repressor/replication initiator pRALTA_0528 ribonuclease IPR012337 - Ribonuclease H-like domain pRALTA_0528 c-terminal IPR014737 - Transposase, Tn5-like, C-terminal pRALTA_0531 fold IPR029058 - Alpha/Beta hydrolase fold pRALTA_0531 hydrolase IPR029058 - Alpha/Beta hydrolase fold pRALTA_0531 beta IPR029058 - Alpha/Beta hydrolase fold pRALTA_0531 alpha IPR029058 - Alpha/Beta hydrolase fold pRALTA_0544 ribonuclease IPR012337 - Ribonuclease H-like domain pRALTA_0546 dna-binding IPR011991 - Winged helix-turn-helix DNA-binding domain pRALTA_0546 rna IPR013324 - RNA polymerase sigma factor, region 3/4 pRALTA_0546 factor IPR013324 - RNA polymerase sigma factor, region 3/4 pRALTA_0546 sigma IPR013324 - RNA polymerase sigma factor, region 3/4 pRALTA_0546 polymerase IPR013324 - RNA polymerase sigma factor, region 3/4 pRALTA_0548 ribonuclease IPR012337 - Ribonuclease H-like domain pRALTA_0549 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase pRALTA_0549 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase pRALTA_0549 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase pRALTA_0549 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase pRALTA_0557 barrel IPR011008 - Dimeric alpha-beta barrel pRALTA_0557 dna-binding IPR011991 - Winged helix-turn-helix DNA-binding domain pRALTA_0569 ribonuclease IPR012337 - Ribonuclease H-like domain pRALTA_0572 major IPR011701 - Major facilitator superfamily pRALTA_0572 major IPR020846 - Major facilitator superfamily domain pRALTA_0572 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase pRALTA_0572 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase pRALTA_0572 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase pRALTA_0572 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase pRALTA_0575 transferase IPR015424 - Pyridoxal phosphate-dependent transferase pRALTA_0576 ribonuclease IPR012337 - Ribonuclease H-like domain pRALTA_0576 c-terminal IPR014737 - Transposase, Tn5-like, C-terminal pRALTA_0579 ribonuclease IPR012337 - Ribonuclease H-like domain pRALTA_0580 replication IPR010921 - Trp repressor/replication initiator pRALTA_0580 repressor IPR010921 - Trp repressor/replication initiator pRALTA_0581 shock IPR011129 - Cold shock protein pRALTA_0586 ribonuclease IPR012337 - Ribonuclease H-like domain pRALTA_0590 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase pRALTA_0590 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase pRALTA_0590 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase pRALTA_0590 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase pRALTA_0596 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase pRALTA_0596 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase pRALTA_0596 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase pRALTA_0596 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase pRALTA_0602 ribonuclease IPR012337 - Ribonuclease H-like domain pRALTA_0614 enzyme IPR011010 - DNA breaking-rejoining enzyme, catalytic core pRALTA_0614 catalytic IPR011010 - DNA breaking-rejoining enzyme, catalytic core pRALTA_0614 core IPR011010 - DNA breaking-rejoining enzyme, catalytic core pRALTA_0614 dna IPR011010 - DNA breaking-rejoining enzyme, catalytic core pRALTA_0614 catalytic IPR013762 - Integrase-like, catalytic core pRALTA_0615 enzyme IPR011010 - DNA breaking-rejoining enzyme, catalytic core pRALTA_0615 catalytic IPR011010 - DNA breaking-rejoining enzyme, catalytic core pRALTA_0615 core IPR011010 - DNA breaking-rejoining enzyme, catalytic core pRALTA_0615 dna IPR011010 - DNA breaking-rejoining enzyme, catalytic core pRALTA_0615 catalytic IPR013762 - Integrase-like, catalytic core pRALTA_0616 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase pRALTA_0616 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase pRALTA_0616 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase pRALTA_0616 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase pRALTA_0621 enzyme IPR011010 - DNA breaking-rejoining enzyme, catalytic core pRALTA_0621 catalytic IPR011010 - DNA breaking-rejoining enzyme, catalytic core pRALTA_0621 core IPR011010 - DNA breaking-rejoining enzyme, catalytic core pRALTA_0621 dna IPR011010 - DNA breaking-rejoining enzyme, catalytic core pRALTA_0621 catalytic IPR013762 - Integrase-like, catalytic core pRALTA_0622 domain-like IPR029060 - PIN domain-like pRALTA_0627 abc IPR003439 - ABC transporter-like pRALTA_0627 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase pRALTA_0627 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase pRALTA_0627 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase pRALTA_0627 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase pRALTA_0628 transmembrane IPR000515 - MetI-like domain pRALTA_0628 abc IPR000515 - MetI-like domain pRALTA_0628 transporter IPR000515 - MetI-like domain pRALTA_0632 enzyme IPR011010 - DNA breaking-rejoining enzyme, catalytic core pRALTA_0632 catalytic IPR011010 - DNA breaking-rejoining enzyme, catalytic core pRALTA_0632 core IPR011010 - DNA breaking-rejoining enzyme, catalytic core pRALTA_0632 dna IPR011010 - DNA breaking-rejoining enzyme, catalytic core pRALTA_0632 catalytic IPR013762 - Integrase-like, catalytic core pRALTA_0640 resistance IPR001036 - Acriflavin resistance protein pRALTA_0641 membrane IPR006143 - RND efflux pump, membrane fusion protein pRALTA_0641 efflux IPR006143 - RND efflux pump, membrane fusion protein pRALTA_0641 pump IPR006143 - RND efflux pump, membrane fusion protein pRALTA_0642 efflux IPR003423 - Outer membrane efflux protein pRALTA_0642 outer IPR003423 - Outer membrane efflux protein pRALTA_0642 membrane IPR003423 - Outer membrane efflux protein pRALTA_0645 cation IPR002524 - Cation efflux protein pRALTA_0645 efflux IPR002524 - Cation efflux protein pRALTA_0646 major IPR011701 - Major facilitator superfamily pRALTA_0646 major IPR020846 - Major facilitator superfamily domain pRALTA_0648 fold IPR012336 - Thioredoxin-like fold pRALTA_0649 symporter IPR002657 - Bile acid:sodium symporter pRALTA_0649 resistance IPR002657 - Bile acid:sodium symporter pRALTA_0650 phosphatase IPR017867 - Protein-tyrosine phosphatase, low molecular weight pRALTA_0650 protein-tyrosine IPR017867 - Protein-tyrosine phosphatase, low molecular weight pRALTA_0651 phosphatase IPR017867 - Protein-tyrosine phosphatase, low molecular weight pRALTA_0651 protein-tyrosine IPR017867 - Protein-tyrosine phosphatase, low molecular weight pRALTA_0652 resistance IPR029068 - Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase pRALTA_0652 dioxygenase IPR029068 - Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase pRALTA_0653 dna-binding IPR011991 - Winged helix-turn-helix DNA-binding domain pRALTA_0654 unknown IPR018691 - Protein of unknown function DUF2188 pRALTA_0656 enzyme IPR011010 - DNA breaking-rejoining enzyme, catalytic core pRALTA_0656 catalytic IPR011010 - DNA breaking-rejoining enzyme, catalytic core pRALTA_0656 core IPR011010 - DNA breaking-rejoining enzyme, catalytic core pRALTA_0656 dna IPR011010 - DNA breaking-rejoining enzyme, catalytic core pRALTA_0656 catalytic IPR013762 - Integrase-like, catalytic core pRALTA_0662 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase pRALTA_0662 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase pRALTA_0662 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase pRALTA_0662 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase pRALTA_0670 dna-binding IPR009061 - DNA binding domain, putative pRALTA_0670 putative IPR009061 - DNA binding domain, putative pRALTA_0670 dna-binding IPR011991 - Winged helix-turn-helix DNA-binding domain pRALTA_0671 helicase IPR014001 - Helicase, superfamily 1/2, ATP-binding domain pRALTA_0671 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase pRALTA_0671 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase pRALTA_0671 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase pRALTA_0671 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase