Dgeo_0004	PWY-1042	glycolysis IV (plant cytosol)
Dgeo_0004	PWY-1622	formaldehyde assimilation I (serine pathway)
Dgeo_0004	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
Dgeo_0004	PWY-5484	glycolysis II (from fructose 6-phosphate)
Dgeo_0004	PWY-5723	Rubisco shunt
Dgeo_0004	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Dgeo_0004	PWY-6886	1-butanol autotrophic biosynthesis
Dgeo_0004	PWY-6901	superpathway of glucose and xylose degradation
Dgeo_0004	PWY-7003	glycerol degradation to butanol
Dgeo_0004	PWY-7124	ethylene biosynthesis V (engineered)
Dgeo_0004	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
Dgeo_0005	PWY-1042	glycolysis IV (plant cytosol)
Dgeo_0005	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
Dgeo_0005	PWY-5484	glycolysis II (from fructose 6-phosphate)
Dgeo_0005	PWY-5723	Rubisco shunt
Dgeo_0005	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Dgeo_0005	PWY-6886	1-butanol autotrophic biosynthesis
Dgeo_0005	PWY-6901	superpathway of glucose and xylose degradation
Dgeo_0005	PWY-7003	glycerol degradation to butanol
Dgeo_0005	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
Dgeo_0005	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
Dgeo_0010	PWY-6749	CMP-legionaminate biosynthesis I
Dgeo_0017	PWY-3781	aerobic respiration I (cytochrome c)
Dgeo_0017	PWY-4521	arsenite oxidation I (respiratory)
Dgeo_0017	PWY-6692	Fe(II) oxidation
Dgeo_0017	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Dgeo_0034	PWY-43	putrescine biosynthesis II
Dgeo_0036	PWY-43	putrescine biosynthesis II
Dgeo_0040	PWY-5381	pyridine nucleotide cycling (plants)
Dgeo_0040	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
Dgeo_0040	PWY-6596	adenosine nucleotides degradation I
Dgeo_0040	PWY-6606	guanosine nucleotides degradation II
Dgeo_0040	PWY-6607	guanosine nucleotides degradation I
Dgeo_0040	PWY-6608	guanosine nucleotides degradation III
Dgeo_0040	PWY-7185	UTP and CTP dephosphorylation I
Dgeo_0051	PWY-1281	sulfoacetaldehyde degradation I
Dgeo_0051	PWY-5482	pyruvate fermentation to acetate II
Dgeo_0051	PWY-5485	pyruvate fermentation to acetate IV
Dgeo_0051	PWY-5497	purine nucleobases degradation II (anaerobic)
Dgeo_0051	PWY-6637	sulfolactate degradation II
Dgeo_0052	PWY-5482	pyruvate fermentation to acetate II
Dgeo_0052	PWY-5485	pyruvate fermentation to acetate IV
Dgeo_0052	PWY-5497	purine nucleobases degradation II (anaerobic)
Dgeo_0057	PWY-6519	8-amino-7-oxononanoate biosynthesis I
Dgeo_0057	PWY-6578	8-amino-7-oxononanoate biosynthesis III
Dgeo_0057	PWY-7147	8-amino-7-oxononanoate biosynthesis II
Dgeo_0058	PWY-5839	menaquinol-7 biosynthesis
Dgeo_0058	PWY-5844	menaquinol-9 biosynthesis
Dgeo_0058	PWY-5849	menaquinol-6 biosynthesis
Dgeo_0058	PWY-5890	menaquinol-10 biosynthesis
Dgeo_0058	PWY-5891	menaquinol-11 biosynthesis
Dgeo_0058	PWY-5892	menaquinol-12 biosynthesis
Dgeo_0058	PWY-5895	menaquinol-13 biosynthesis
Dgeo_0063	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Dgeo_0063	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
Dgeo_0063	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
Dgeo_0063	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
Dgeo_0064	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Dgeo_0064	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
Dgeo_0064	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
Dgeo_0065	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Dgeo_0065	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
Dgeo_0065	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
Dgeo_0066	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Dgeo_0066	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
Dgeo_0066	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
Dgeo_0067	PWY-6123	inosine-5'-phosphate biosynthesis I
Dgeo_0067	PWY-6124	inosine-5'-phosphate biosynthesis II
Dgeo_0067	PWY-7234	inosine-5'-phosphate biosynthesis III
Dgeo_0073	PWY-7560	methylerythritol phosphate pathway II
Dgeo_0079	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Dgeo_0079	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Dgeo_0082	PWY-6123	inosine-5'-phosphate biosynthesis I
Dgeo_0082	PWY-7234	inosine-5'-phosphate biosynthesis III
Dgeo_0083	PWY-2161	folate polyglutamylation
Dgeo_0093	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Dgeo_0093	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
Dgeo_0121	PWY-5147	oleate biosynthesis I (plants)
Dgeo_0138	PWY-5686	UMP biosynthesis
Dgeo_0139	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
Dgeo_0140	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
Dgeo_0144	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
Dgeo_0144	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
Dgeo_0147	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
Dgeo_0147	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
Dgeo_0180	PWY-7560	methylerythritol phosphate pathway II
Dgeo_0181	PWY-7560	methylerythritol phosphate pathway II
Dgeo_0202	PWY-7193	pyrimidine ribonucleosides salvage I
Dgeo_0205	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Dgeo_0206	PWY-5663	tetrahydrobiopterin biosynthesis I
Dgeo_0206	PWY-5664	tetrahydrobiopterin biosynthesis II
Dgeo_0206	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
Dgeo_0206	PWY-6703	preQ<sub>0</sub> biosynthesis
Dgeo_0206	PWY-6983	tetrahydrobiopterin biosynthesis III
Dgeo_0206	PWY-7442	drosopterin and aurodrosopterin biosynthesis
Dgeo_0221	PWY-1622	formaldehyde assimilation I (serine pathway)
Dgeo_0221	PWY-181	photorespiration
Dgeo_0221	PWY-2161	folate polyglutamylation
Dgeo_0221	PWY-2201	folate transformations I
Dgeo_0221	PWY-3661	glycine betaine degradation I
Dgeo_0221	PWY-3661-1	glycine betaine degradation II (mammalian)
Dgeo_0221	PWY-3841	folate transformations II
Dgeo_0221	PWY-5497	purine nucleobases degradation II (anaerobic)
Dgeo_0225	PWY-5344	L-homocysteine biosynthesis
Dgeo_0225	PWY-7174	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation II
Dgeo_0251	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
Dgeo_0251	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Dgeo_0251	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
Dgeo_0251	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
Dgeo_0251	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Dgeo_0251	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Dgeo_0251	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
Dgeo_0251	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
Dgeo_0260	PWY-5971	palmitate biosynthesis II (bacteria and plants)
Dgeo_0260	PWY-5973	<i>cis</i>-vaccenate biosynthesis
Dgeo_0260	PWY-5989	stearate biosynthesis II (bacteria and plants)
Dgeo_0260	PWY-6113	superpathway of mycolate biosynthesis
Dgeo_0260	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
Dgeo_0260	PWY-6519	8-amino-7-oxononanoate biosynthesis I
Dgeo_0260	PWY-7096	triclosan resistance
Dgeo_0260	PWYG-321	mycolate biosynthesis
Dgeo_0274	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
Dgeo_0283	PWY-5964	guanylyl molybdenum cofactor biosynthesis
Dgeo_0287	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
Dgeo_0287	PWY-5912	2'-deoxymugineic acid phytosiderophore biosynthesis
Dgeo_0292	PWY-31	canavanine degradation
Dgeo_0292	PWY-4984	urea cycle
Dgeo_0292	PWY-6305	putrescine biosynthesis IV
Dgeo_0292	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
Dgeo_0301	PWY-6167	flavin biosynthesis II (archaea)
Dgeo_0301	PWY-6168	flavin biosynthesis III (fungi)
Dgeo_0301	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Dgeo_0302	PWY-6167	flavin biosynthesis II (archaea)
Dgeo_0302	PWY-6168	flavin biosynthesis III (fungi)
Dgeo_0302	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
Dgeo_0303	PWY-6167	flavin biosynthesis II (archaea)
Dgeo_0303	PWY-6168	flavin biosynthesis III (fungi)
Dgeo_0321	PWY-3861	mannitol degradation II
Dgeo_0321	PWY-3881	mannitol biosynthesis
Dgeo_0321	PWY-5659	GDP-mannose biosynthesis
Dgeo_0321	PWY-7456	mannan degradation
Dgeo_0321	PWY-882	L-ascorbate biosynthesis I (L-galactose pathway)
Dgeo_0329	PWY-6823	molybdenum cofactor biosynthesis
Dgeo_0330	PWY-6700	queuosine biosynthesis
Dgeo_0333	PWY-2161	folate polyglutamylation
Dgeo_0341	PWY-5659	GDP-mannose biosynthesis
Dgeo_0341	PWY-6073	alginate biosynthesis I (algal)
Dgeo_0341	PWY-6082	alginate biosynthesis II (bacterial)
Dgeo_0341	PWY-882	L-ascorbate biosynthesis I (L-galactose pathway)
Dgeo_0348	PWY-6936	seleno-amino acid biosynthesis
Dgeo_0348	PWY-7274	D-cycloserine biosynthesis
Dgeo_0352	PWY-6749	CMP-legionaminate biosynthesis I
Dgeo_0353	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
Dgeo_0353	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
Dgeo_0357	PWY-6019	pseudouridine degradation
Dgeo_0393	PWY-5791	1,4-dihydroxy-2-naphthoate biosynthesis II (plants)
Dgeo_0393	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
Dgeo_0396	PWY-6614	tetrahydrofolate biosynthesis
Dgeo_0397	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
Dgeo_0397	PWY-6148	tetrahydromethanopterin biosynthesis
Dgeo_0397	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
Dgeo_0397	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
Dgeo_0398	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
Dgeo_0398	PWY-6148	tetrahydromethanopterin biosynthesis
Dgeo_0398	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
Dgeo_0398	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
Dgeo_0406	PWY-3781	aerobic respiration I (cytochrome c)
Dgeo_0406	PWY-4521	arsenite oxidation I (respiratory)
Dgeo_0406	PWY-6692	Fe(II) oxidation
Dgeo_0406	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Dgeo_0411	PWY-6654	phosphopantothenate biosynthesis III
Dgeo_0420	PWY-6610	adenine and adenosine salvage IV
Dgeo_0433	PWY-4381	fatty acid biosynthesis initiation I
Dgeo_0434	PWY-4381	fatty acid biosynthesis initiation I
Dgeo_0434	PWY-6799	fatty acid biosynthesis (plant mitochondria)
Dgeo_0434	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Dgeo_0435	PWY-5367	petroselinate biosynthesis
Dgeo_0435	PWY-5971	palmitate biosynthesis II (bacteria and plants)
Dgeo_0435	PWY-5973	<i>cis</i>-vaccenate biosynthesis
Dgeo_0435	PWY-5989	stearate biosynthesis II (bacteria and plants)
Dgeo_0435	PWY-5994	palmitate biosynthesis I (animals and fungi)
Dgeo_0435	PWY-6113	superpathway of mycolate biosynthesis
Dgeo_0435	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
Dgeo_0435	PWY-6519	8-amino-7-oxononanoate biosynthesis I
Dgeo_0435	PWY-6951	Dgeo_0435
Dgeo_0435	PWY-7053	docosahexaenoate biosynthesis I (lower eukaryotes)
Dgeo_0435	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Dgeo_0435	PWYG-321	mycolate biosynthesis
Dgeo_0443	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
Dgeo_0443	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
Dgeo_0447	PWY-7374	1,4-dihydroxy-6-naphthoate biosynthesis I
Dgeo_0449	PWY-7378	aminopropanol phosphate biosynthesis II
Dgeo_0475	PWY-842	starch degradation I
Dgeo_0485	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Dgeo_0485	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Dgeo_0489	PWY-4381	fatty acid biosynthesis initiation I
Dgeo_0489	PWY-5743	3-hydroxypropanoate cycle
Dgeo_0489	PWY-5744	glyoxylate assimilation
Dgeo_0489	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Dgeo_0489	PWY-6679	jadomycin biosynthesis
Dgeo_0489	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Dgeo_0498	PWY-5958	acridone alkaloid biosynthesis
Dgeo_0498	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
Dgeo_0498	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
Dgeo_0500	PWY-5686	UMP biosynthesis
Dgeo_0502	PWY-5686	UMP biosynthesis
Dgeo_0503	PWY-5686	UMP biosynthesis
Dgeo_0504	PWY-7183	pyrimidine nucleobases salvage I
Dgeo_0513	PWY-6123	inosine-5'-phosphate biosynthesis I
Dgeo_0513	PWY-6124	inosine-5'-phosphate biosynthesis II
Dgeo_0513	PWY-7234	inosine-5'-phosphate biosynthesis III
Dgeo_0514	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
Dgeo_0514	PWY-2201	folate transformations I
Dgeo_0514	PWY-3841	folate transformations II
Dgeo_0514	PWY-5030	L-histidine degradation III
Dgeo_0514	PWY-5497	purine nucleobases degradation II (anaerobic)
Dgeo_0514	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
Dgeo_0517	PWY-5344	L-homocysteine biosynthesis
Dgeo_0518	PWY-5344	L-homocysteine biosynthesis
Dgeo_0518	PWY-7174	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation II
Dgeo_0537	PWY-2622	trehalose biosynthesis IV
Dgeo_0539	PWY-2661	trehalose biosynthesis V
Dgeo_0540	PWY-2661	trehalose biosynthesis V
Dgeo_0548	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
Dgeo_0548	PWY-6596	adenosine nucleotides degradation I
Dgeo_0548	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
Dgeo_0578	PWY-7199	pyrimidine deoxyribonucleosides salvage
Dgeo_0586	PWY-7180	2'-deoxy-&alpha;-D-ribose 1-phosphate degradation
Dgeo_0598	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
Dgeo_0599	PWY-6871	3-methylbutanol biosynthesis
Dgeo_0600	PWY-5101	L-isoleucine biosynthesis II
Dgeo_0600	PWY-5103	L-isoleucine biosynthesis III
Dgeo_0600	PWY-5104	L-isoleucine biosynthesis IV
Dgeo_0600	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Dgeo_0601	PWY-5101	L-isoleucine biosynthesis II
Dgeo_0601	PWY-5103	L-isoleucine biosynthesis III
Dgeo_0601	PWY-5104	L-isoleucine biosynthesis IV
Dgeo_0601	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
Dgeo_0601	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
Dgeo_0601	PWY-6389	(<i>S</i>)-acetoin biosynthesis
Dgeo_0601	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Dgeo_0602	PWY-5101	L-isoleucine biosynthesis II
Dgeo_0602	PWY-5103	L-isoleucine biosynthesis III
Dgeo_0602	PWY-5104	L-isoleucine biosynthesis IV
Dgeo_0602	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
Dgeo_0602	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
Dgeo_0602	PWY-6389	(<i>S</i>)-acetoin biosynthesis
Dgeo_0602	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Dgeo_0617	PWY-1361	benzoyl-CoA degradation I (aerobic)
Dgeo_0617	PWY-5109	2-methylbutanoate biosynthesis
Dgeo_0617	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
Dgeo_0617	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
Dgeo_0617	PWY-5177	glutaryl-CoA degradation
Dgeo_0617	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Dgeo_0617	PWY-6435	4-hydroxybenzoate biosynthesis V
Dgeo_0617	PWY-6583	pyruvate fermentation to butanol I
Dgeo_0617	PWY-6863	pyruvate fermentation to hexanol
Dgeo_0617	PWY-6883	pyruvate fermentation to butanol II
Dgeo_0617	PWY-6944	androstenedione degradation
Dgeo_0617	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
Dgeo_0617	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
Dgeo_0617	PWY-7007	methyl ketone biosynthesis
Dgeo_0617	PWY-7046	4-coumarate degradation (anaerobic)
Dgeo_0617	PWY-7094	fatty acid salvage
Dgeo_0617	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
Dgeo_0617	PWY-735	jasmonic acid biosynthesis
Dgeo_0617	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
Dgeo_0621	PWY-5484	glycolysis II (from fructose 6-phosphate)
Dgeo_0624	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Dgeo_0624	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Dgeo_0625	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Dgeo_0625	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Dgeo_0661	PWY-1622	formaldehyde assimilation I (serine pathway)
Dgeo_0661	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
Dgeo_0661	PWY-5913	TCA cycle VI (obligate autotrophs)
Dgeo_0661	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Dgeo_0661	PWY-6146	<i>Methanobacterium thermoautotrophicum</i> biosynthetic metabolism
Dgeo_0661	PWY-6549	L-glutamine biosynthesis III
Dgeo_0661	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
Dgeo_0661	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
Dgeo_0661	PWY-7124	ethylene biosynthesis V (engineered)
Dgeo_0666	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
Dgeo_0666	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
Dgeo_0666	PWY-6268	adenosylcobalamin salvage from cobalamin
Dgeo_0666	PWY-6269	adenosylcobalamin salvage from cobinamide II
Dgeo_0667	PWY-5941	glycogen degradation II (eukaryotic)
Dgeo_0667	PWY-6724	starch degradation II
Dgeo_0667	PWY-6737	starch degradation V
Dgeo_0667	PWY-7238	sucrose biosynthesis II
Dgeo_0678	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Dgeo_0678	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Dgeo_0685	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Dgeo_0685	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Dgeo_0686	PWY-6902	chitin degradation II
Dgeo_0688	PWY-6123	inosine-5'-phosphate biosynthesis I
Dgeo_0688	PWY-6124	inosine-5'-phosphate biosynthesis II
Dgeo_0688	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Dgeo_0688	PWY-7234	inosine-5'-phosphate biosynthesis III
Dgeo_0699	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
Dgeo_0699	PWY-2201	folate transformations I
Dgeo_0699	PWY-3841	folate transformations II
Dgeo_0699	PWY-5030	L-histidine degradation III
Dgeo_0699	PWY-5497	purine nucleobases degradation II (anaerobic)
Dgeo_0699	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
Dgeo_0704	PWY-7560	methylerythritol phosphate pathway II
Dgeo_0713	PWY-6832	2-aminoethylphosphonate degradation II
Dgeo_0721	PWY-6803	phosphatidylcholine acyl editing
Dgeo_0721	PWY-7409	phospholipid remodeling (phosphatidylethanolamine, yeast)
Dgeo_0721	PWY-7416	phospholipid remodeling (phosphatidylcholine, yeast)
Dgeo_0721	PWY-7417	phospholipid remodeling (phosphatidate, yeast)
Dgeo_0725	PWY-5767	Dgeo_0725
Dgeo_0742	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Dgeo_0748	PWY-5941	glycogen degradation II (eukaryotic)
Dgeo_0748	PWY-6724	starch degradation II
Dgeo_0748	PWY-6737	starch degradation V
Dgeo_0748	PWY-7238	sucrose biosynthesis II
Dgeo_0754	PWY-1361	benzoyl-CoA degradation I (aerobic)
Dgeo_0754	PWY-5109	2-methylbutanoate biosynthesis
Dgeo_0754	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
Dgeo_0754	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
Dgeo_0754	PWY-5177	glutaryl-CoA degradation
Dgeo_0754	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Dgeo_0754	PWY-6435	4-hydroxybenzoate biosynthesis V
Dgeo_0754	PWY-6583	pyruvate fermentation to butanol I
Dgeo_0754	PWY-6863	pyruvate fermentation to hexanol
Dgeo_0754	PWY-6883	pyruvate fermentation to butanol II
Dgeo_0754	PWY-6944	androstenedione degradation
Dgeo_0754	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
Dgeo_0754	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
Dgeo_0754	PWY-7007	methyl ketone biosynthesis
Dgeo_0754	PWY-7046	4-coumarate degradation (anaerobic)
Dgeo_0754	PWY-7094	fatty acid salvage
Dgeo_0754	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
Dgeo_0754	PWY-735	jasmonic acid biosynthesis
Dgeo_0754	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
Dgeo_0760	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
Dgeo_0776	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
Dgeo_0776	PWY-6153	autoinducer AI-2 biosynthesis I
Dgeo_0776	PWY-6154	autoinducer AI-2 biosynthesis II (<i>Vibrio</i>)
Dgeo_0790	PWY-2941	L-lysine biosynthesis II
Dgeo_0790	PWY-2942	L-lysine biosynthesis III
Dgeo_0790	PWY-5097	L-lysine biosynthesis VI
Dgeo_0811	PWY-4381	fatty acid biosynthesis initiation I
Dgeo_0811	PWY-5743	3-hydroxypropanoate cycle
Dgeo_0811	PWY-5744	glyoxylate assimilation
Dgeo_0811	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Dgeo_0811	PWY-6679	jadomycin biosynthesis
Dgeo_0811	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Dgeo_0827	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
Dgeo_0827	PWY-7177	UTP and CTP dephosphorylation II
Dgeo_0827	PWY-7185	UTP and CTP dephosphorylation I
Dgeo_0830	PWY-6854	ethylene biosynthesis III (microbes)
Dgeo_0841	PWY-3341	L-proline biosynthesis III
Dgeo_0841	PWY-4981	L-proline biosynthesis II (from arginine)
Dgeo_0841	PWY-6344	L-ornithine degradation II (Stickland reaction)
Dgeo_0850	PWY-6853	ethylene biosynthesis II (microbes)
Dgeo_0851	PWY-5737	(5<i>R</i>)-carbapenem carboxylate biosynthesis
Dgeo_0851	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
Dgeo_0860	PWY-2781	<i>cis</i>-zeatin biosynthesis
Dgeo_0861	PWY-622	starch biosynthesis
Dgeo_0862	PWY-5743	3-hydroxypropanoate cycle
Dgeo_0862	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Dgeo_0862	PWY-6728	methylaspartate cycle
Dgeo_0862	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Dgeo_0882	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Dgeo_0882	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
Dgeo_0886	PWY-3781	aerobic respiration I (cytochrome c)
Dgeo_0886	PWY-4302	aerobic respiration III (alternative oxidase pathway)
Dgeo_0886	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
Dgeo_0886	PWY-5690	TCA cycle II (plants and fungi)
Dgeo_0886	PWY-6728	methylaspartate cycle
Dgeo_0886	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Dgeo_0886	PWY-7254	TCA cycle VII (acetate-producers)
Dgeo_0886	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Dgeo_0887	PWY-3781	aerobic respiration I (cytochrome c)
Dgeo_0887	PWY-4302	aerobic respiration III (alternative oxidase pathway)
Dgeo_0887	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
Dgeo_0887	PWY-5690	TCA cycle II (plants and fungi)
Dgeo_0887	PWY-6728	methylaspartate cycle
Dgeo_0887	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Dgeo_0887	PWY-7254	TCA cycle VII (acetate-producers)
Dgeo_0887	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Dgeo_0891	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
Dgeo_0891	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
Dgeo_0934	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
Dgeo_0946	PWY-6700	queuosine biosynthesis
Dgeo_0981	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
Dgeo_0981	PWY-622	starch biosynthesis
Dgeo_0983	PWY-5958	acridone alkaloid biosynthesis
Dgeo_0983	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
Dgeo_0983	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
Dgeo_0985	PWY-5958	acridone alkaloid biosynthesis
Dgeo_0985	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
Dgeo_0985	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
Dgeo_0994	PWY-6891	thiazole biosynthesis II (Bacillus)
Dgeo_0994	PWY-6892	thiazole biosynthesis I (E. coli)
Dgeo_0994	PWY-7560	methylerythritol phosphate pathway II
Dgeo_1001	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Dgeo_1010	PWY-7560	methylerythritol phosphate pathway II
Dgeo_1013	PWY-101	photosynthesis light reactions
Dgeo_1013	PWY-7230	ubiquinol-6 biosynthesis from 4-aminobenzoate (eukaryotic)
Dgeo_1033	PWY-7396	butanol and isobutanol biosynthesis (engineered)
Dgeo_1044	PWY-7560	methylerythritol phosphate pathway II
Dgeo_1088	PWY-5392	reductive TCA cycle II
Dgeo_1088	PWY-5537	pyruvate fermentation to acetate V
Dgeo_1088	PWY-5538	pyruvate fermentation to acetate VI
Dgeo_1088	PWY-5690	TCA cycle II (plants and fungi)
Dgeo_1088	PWY-5913	TCA cycle VI (obligate autotrophs)
Dgeo_1088	PWY-6728	methylaspartate cycle
Dgeo_1088	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Dgeo_1088	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Dgeo_1089	PWY-5392	reductive TCA cycle II
Dgeo_1089	PWY-5537	pyruvate fermentation to acetate V
Dgeo_1089	PWY-5538	pyruvate fermentation to acetate VI
Dgeo_1089	PWY-5690	TCA cycle II (plants and fungi)
Dgeo_1089	PWY-5913	TCA cycle VI (obligate autotrophs)
Dgeo_1089	PWY-6728	methylaspartate cycle
Dgeo_1089	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Dgeo_1089	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Dgeo_1102	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Dgeo_1102	PWY-5723	Rubisco shunt
Dgeo_1103	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Dgeo_1106	PWY-6466	pyridoxal 5'-phosphate biosynthesis II
Dgeo_1107	PWY-6466	pyridoxal 5'-phosphate biosynthesis II
Dgeo_1112	PWY-7533	gliotoxin biosynthesis
Dgeo_1114	PWY-6832	2-aminoethylphosphonate degradation II
Dgeo_1118	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
Dgeo_1118	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
Dgeo_1118	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
Dgeo_1127	PWY-2941	L-lysine biosynthesis II
Dgeo_1127	PWY-2942	L-lysine biosynthesis III
Dgeo_1127	PWY-5097	L-lysine biosynthesis VI
Dgeo_1127	PWY-6559	spermidine biosynthesis II
Dgeo_1127	PWY-6562	norspermidine biosynthesis
Dgeo_1127	PWY-7153	grixazone biosynthesis
Dgeo_1133	PWY-1042	glycolysis IV (plant cytosol)
Dgeo_1133	PWY-5484	glycolysis II (from fructose 6-phosphate)
Dgeo_1133	PWY-6901	superpathway of glucose and xylose degradation
Dgeo_1133	PWY-7003	glycerol degradation to butanol
Dgeo_1134	PWY-1042	glycolysis IV (plant cytosol)
Dgeo_1134	PWY-5484	glycolysis II (from fructose 6-phosphate)
Dgeo_1134	PWY-6886	1-butanol autotrophic biosynthesis
Dgeo_1134	PWY-6901	superpathway of glucose and xylose degradation
Dgeo_1134	PWY-7003	glycerol degradation to butanol
Dgeo_1135	PWY-1042	glycolysis IV (plant cytosol)
Dgeo_1135	PWY-5484	glycolysis II (from fructose 6-phosphate)
Dgeo_1135	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Dgeo_1135	PWY-7003	glycerol degradation to butanol
Dgeo_1141	PWY-4041	&gamma;-glutamyl cycle
Dgeo_1141	PWY-5826	hypoglycin biosynthesis
Dgeo_1145	PWY-6938	NADH repair
Dgeo_1162	PWY-5316	nicotine biosynthesis
Dgeo_1162	PWY-7342	superpathway of nicotine biosynthesis
Dgeo_1163	PWY-5316	nicotine biosynthesis
Dgeo_1163	PWY-5381	pyridine nucleotide cycling (plants)
Dgeo_1163	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
Dgeo_1163	PWY-7342	superpathway of nicotine biosynthesis
Dgeo_1164	PWY-5316	nicotine biosynthesis
Dgeo_1164	PWY-7342	superpathway of nicotine biosynthesis
Dgeo_1166	PWY-5913	TCA cycle VI (obligate autotrophs)
Dgeo_1166	PWY-6549	L-glutamine biosynthesis III
Dgeo_1166	PWY-6728	methylaspartate cycle
Dgeo_1166	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Dgeo_1166	PWY-7124	ethylene biosynthesis V (engineered)
Dgeo_1166	PWY-7254	TCA cycle VII (acetate-producers)
Dgeo_1166	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
Dgeo_1182	PWY-5971	palmitate biosynthesis II (bacteria and plants)
Dgeo_1182	PWY-5973	<i>cis</i>-vaccenate biosynthesis
Dgeo_1182	PWY-5989	stearate biosynthesis II (bacteria and plants)
Dgeo_1182	PWY-5994	palmitate biosynthesis I (animals and fungi)
Dgeo_1182	PWY-6113	superpathway of mycolate biosynthesis
Dgeo_1182	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
Dgeo_1182	PWY-6519	8-amino-7-oxononanoate biosynthesis I
Dgeo_1182	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Dgeo_1182	PWYG-321	mycolate biosynthesis
Dgeo_1184	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
Dgeo_1184	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
Dgeo_1184	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
Dgeo_1184	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
Dgeo_1196	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
Dgeo_1196	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
Dgeo_1198	PWY-5941	glycogen degradation II (eukaryotic)
Dgeo_1198	PWY-622	starch biosynthesis
Dgeo_1198	PWY-6731	starch degradation III
Dgeo_1198	PWY-6737	starch degradation V
Dgeo_1198	PWY-7238	sucrose biosynthesis II
Dgeo_1203	PWY-381	nitrate reduction II (assimilatory)
Dgeo_1203	PWY-5675	nitrate reduction V (assimilatory)
Dgeo_1203	PWY-6549	L-glutamine biosynthesis III
Dgeo_1203	PWY-6963	ammonia assimilation cycle I
Dgeo_1203	PWY-6964	ammonia assimilation cycle II
Dgeo_1204	PWY-381	nitrate reduction II (assimilatory)
Dgeo_1204	PWY-5675	nitrate reduction V (assimilatory)
Dgeo_1204	PWY-6549	L-glutamine biosynthesis III
Dgeo_1204	PWY-6963	ammonia assimilation cycle I
Dgeo_1204	PWY-6964	ammonia assimilation cycle II
Dgeo_1240	PWY-5101	L-isoleucine biosynthesis II
Dgeo_1240	PWY-5103	L-isoleucine biosynthesis III
Dgeo_1240	PWY-5104	L-isoleucine biosynthesis IV
Dgeo_1240	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Dgeo_1257	PWY-3081	L-lysine biosynthesis V
Dgeo_1257	PWY-6871	3-methylbutanol biosynthesis
Dgeo_1265	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Dgeo_1265	PWY-5723	Rubisco shunt
Dgeo_1266	PWY-7180	2'-deoxy-&alpha;-D-ribose 1-phosphate degradation
Dgeo_1271	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Dgeo_1274	PWY-7039	phosphatidate metabolism, as a signaling molecule
Dgeo_1286	PWY-6556	pyrimidine ribonucleosides salvage II
Dgeo_1286	PWY-7181	pyrimidine deoxyribonucleosides degradation
Dgeo_1286	PWY-7193	pyrimidine ribonucleosides salvage I
Dgeo_1286	PWY-7199	pyrimidine deoxyribonucleosides salvage
Dgeo_1287	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Dgeo_1294	PWY-7335	UDP-<i>N</i>-acetyl-&alpha;-D-mannosaminouronate biosynthesis
Dgeo_1295	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
Dgeo_1295	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
Dgeo_1295	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
Dgeo_1296	PWY-7183	pyrimidine nucleobases salvage I
Dgeo_1300	PWY-6784	cellulose and hemicellulose degradation (cellulolosome)
Dgeo_1304	PWY-3801	sucrose degradation II (sucrose synthase)
Dgeo_1304	PWY-5054	sorbitol biosynthesis I
Dgeo_1304	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
Dgeo_1304	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
Dgeo_1304	PWY-5659	GDP-mannose biosynthesis
Dgeo_1304	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Dgeo_1304	PWY-621	sucrose degradation III (sucrose invertase)
Dgeo_1304	PWY-622	starch biosynthesis
Dgeo_1304	PWY-6531	mannitol cycle
Dgeo_1304	PWY-6981	chitin biosynthesis
Dgeo_1304	PWY-7238	sucrose biosynthesis II
Dgeo_1304	PWY-7347	sucrose biosynthesis III
Dgeo_1304	PWY-7385	1,3-propanediol biosynthesis (engineered)
Dgeo_1317	PWY-6562	norspermidine biosynthesis
Dgeo_1319	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Dgeo_1319	PWY-5723	Rubisco shunt
Dgeo_1320	PWY-5743	3-hydroxypropanoate cycle
Dgeo_1320	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Dgeo_1320	PWY-6728	methylaspartate cycle
Dgeo_1320	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Dgeo_1325	PWY-5381	pyridine nucleotide cycling (plants)
Dgeo_1333	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
Dgeo_1334	PWY-7432	L-phenylalanine biosynthesis III (cytosolic, plants)
Dgeo_1336	PWY-2201	folate transformations I
Dgeo_1336	PWY-3841	folate transformations II
Dgeo_1337	PWY-2201	folate transformations I
Dgeo_1337	PWY-3841	folate transformations II
Dgeo_1347	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Dgeo_1347	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
Dgeo_1347	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
Dgeo_1352	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
Dgeo_1380	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
Dgeo_1381	PWY-5123	<i>trans, trans</i>-farnesyl diphosphate biosynthesis
Dgeo_1381	PWY-6174	mevalonate pathway II (archaea)
Dgeo_1381	PWY-6383	mono-<i>trans</i>, poly-<i>cis</i> decaprenyl phosphate biosynthesis
Dgeo_1381	PWY-6859	<i>all-trans</i>-farnesol biosynthesis
Dgeo_1381	PWY-7102	bisabolene biosynthesis
Dgeo_1381	PWY-7391	isoprene biosynthesis II (engineered)
Dgeo_1381	PWY-7524	mevalonate pathway III (archaea)
Dgeo_1381	PWY-7560	methylerythritol phosphate pathway II
Dgeo_1381	PWY-922	mevalonate pathway I
Dgeo_1383	PWY-5482	pyruvate fermentation to acetate II
Dgeo_1383	PWY-5485	pyruvate fermentation to acetate IV
Dgeo_1383	PWY-5497	purine nucleobases degradation II (anaerobic)
Dgeo_1386	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Dgeo_1386	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Dgeo_1404	PWY-5686	UMP biosynthesis
Dgeo_1407	PWY-6683	sulfate reduction III (assimilatory)
Dgeo_1408	PWY-5340	sulfate activation for sulfonation
Dgeo_1410	PWY-5278	sulfite oxidation III
Dgeo_1410	PWY-5340	sulfate activation for sulfonation
Dgeo_1410	PWY-6683	sulfate reduction III (assimilatory)
Dgeo_1410	PWY-6932	selenate reduction
Dgeo_1422	PWY-5155	&beta;-alanine biosynthesis III
Dgeo_1426	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
Dgeo_1444	PWY-1361	benzoyl-CoA degradation I (aerobic)
Dgeo_1444	PWY-5109	2-methylbutanoate biosynthesis
Dgeo_1444	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
Dgeo_1444	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
Dgeo_1444	PWY-5177	glutaryl-CoA degradation
Dgeo_1444	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Dgeo_1444	PWY-6435	4-hydroxybenzoate biosynthesis V
Dgeo_1444	PWY-6583	pyruvate fermentation to butanol I
Dgeo_1444	PWY-6863	pyruvate fermentation to hexanol
Dgeo_1444	PWY-6883	pyruvate fermentation to butanol II
Dgeo_1444	PWY-6944	androstenedione degradation
Dgeo_1444	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
Dgeo_1444	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
Dgeo_1444	PWY-7007	methyl ketone biosynthesis
Dgeo_1444	PWY-7046	4-coumarate degradation (anaerobic)
Dgeo_1444	PWY-7094	fatty acid salvage
Dgeo_1444	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
Dgeo_1444	PWY-735	jasmonic acid biosynthesis
Dgeo_1444	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
Dgeo_1461	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
Dgeo_1461	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
Dgeo_1461	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
Dgeo_1476	PWY-5530	sorbitol biosynthesis II
Dgeo_1486	PWY-6829	tRNA methylation (yeast)
Dgeo_1486	PWY-7285	methylwyosine biosynthesis
Dgeo_1486	PWY-7286	7-(3-amino-3-carboxypropyl)-wyosine biosynthesis
Dgeo_1488	PWY-2201	folate transformations I
Dgeo_1488	PWY-5497	purine nucleobases degradation II (anaerobic)
Dgeo_1493	PWY-723	alkylnitronates degradation
Dgeo_1494	PWY-723	alkylnitronates degradation
Dgeo_1497	PWY-4202	arsenate detoxification I (glutaredoxin)
Dgeo_1497	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
Dgeo_1497	PWY-6608	guanosine nucleotides degradation III
Dgeo_1497	PWY-6609	adenine and adenosine salvage III
Dgeo_1497	PWY-6611	adenine and adenosine salvage V
Dgeo_1497	PWY-6620	guanine and guanosine salvage
Dgeo_1497	PWY-6627	salinosporamide A biosynthesis
Dgeo_1497	PWY-6644	fluoroacetate and fluorothreonine biosynthesis
Dgeo_1497	PWY-7179	purine deoxyribonucleosides degradation I
Dgeo_1497	PWY-7179-1	purine deoxyribonucleosides degradation
Dgeo_1533	PWY-5651	L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
Dgeo_1533	PWY-6309	L-tryptophan degradation XI (mammalian, via kynurenine)
Dgeo_1534	PWY-5651	L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
Dgeo_1534	PWY-6309	L-tryptophan degradation XI (mammalian, via kynurenine)
Dgeo_1536	PWY-7158	L-phenylalanine degradation V
Dgeo_1539	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Dgeo_1572	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
Dgeo_1572	PWY-3461	L-tyrosine biosynthesis II
Dgeo_1572	PWY-3462	L-phenylalanine biosynthesis II
Dgeo_1572	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
Dgeo_1572	PWY-6120	L-tyrosine biosynthesis III
Dgeo_1572	PWY-6164	3-dehydroquinate biosynthesis I
Dgeo_1572	PWY-6627	salinosporamide A biosynthesis
Dgeo_1588	PWY-6599	guanine and guanosine salvage II
Dgeo_1588	PWY-6609	adenine and adenosine salvage III
Dgeo_1588	PWY-6610	adenine and adenosine salvage IV
Dgeo_1588	PWY-6620	guanine and guanosine salvage
Dgeo_1596	PWY-4202	arsenate detoxification I (glutaredoxin)
Dgeo_1596	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
Dgeo_1596	PWY-6608	guanosine nucleotides degradation III
Dgeo_1596	PWY-6609	adenine and adenosine salvage III
Dgeo_1596	PWY-6611	adenine and adenosine salvage V
Dgeo_1596	PWY-6620	guanine and guanosine salvage
Dgeo_1596	PWY-6627	salinosporamide A biosynthesis
Dgeo_1596	PWY-6644	fluoroacetate and fluorothreonine biosynthesis
Dgeo_1596	PWY-7179	purine deoxyribonucleosides degradation I
Dgeo_1596	PWY-7179-1	purine deoxyribonucleosides degradation
Dgeo_1604	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Dgeo_1604	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Dgeo_1605	PWY-4981	L-proline biosynthesis II (from arginine)
Dgeo_1605	PWY-4984	urea cycle
Dgeo_1605	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Dgeo_1616	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Dgeo_1616	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
Dgeo_1616	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
Dgeo_1630	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
Dgeo_1630	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
Dgeo_1630	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
Dgeo_1630	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
Dgeo_1631	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Dgeo_1631	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Dgeo_1632	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Dgeo_1632	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Dgeo_1637	PWY-1042	glycolysis IV (plant cytosol)
Dgeo_1637	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Dgeo_1637	PWY-5484	glycolysis II (from fructose 6-phosphate)
Dgeo_1637	PWY-7385	1,3-propanediol biosynthesis (engineered)
Dgeo_1657	PWY-6936	seleno-amino acid biosynthesis
Dgeo_1664	PWY-6749	CMP-legionaminate biosynthesis I
Dgeo_1679	PWY-5791	1,4-dihydroxy-2-naphthoate biosynthesis II (plants)
Dgeo_1679	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
Dgeo_1684	PWY-5135	xanthohumol biosynthesis
Dgeo_1684	PWY-6316	aromatic polyketides biosynthesis
Dgeo_1684	PWY-6787	flavonoid biosynthesis (in equisetum)
Dgeo_1684	PWY-7397	naringenin biosynthesis (engineered)
Dgeo_1689	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
Dgeo_1689	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
Dgeo_1689	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Dgeo_1689	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
Dgeo_1689	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
Dgeo_1689	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
Dgeo_1689	PWY-7205	CMP phosphorylation
Dgeo_1689	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
Dgeo_1689	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Dgeo_1689	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
Dgeo_1689	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Dgeo_1689	PWY-7224	purine deoxyribonucleosides salvage
Dgeo_1689	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
Dgeo_1689	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
Dgeo_1723	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Dgeo_1723	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Dgeo_1730	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Dgeo_1731	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Dgeo_1732	PWY-6164	3-dehydroquinate biosynthesis I
Dgeo_1733	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Dgeo_1733	PWY-6416	quinate degradation II
Dgeo_1733	PWY-6707	gallate biosynthesis
Dgeo_1741	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
Dgeo_1741	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
Dgeo_1742	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
Dgeo_1742	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
Dgeo_1742	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
Dgeo_1746	PWY-6784	cellulose and hemicellulose degradation (cellulolosome)
Dgeo_1746	PWY-842	starch degradation I
Dgeo_1749	PWY-3961	phosphopantothenate biosynthesis II
Dgeo_1756	PWY-7456	mannan degradation
Dgeo_1759	PWY-6672	<i>cis</i>-genanyl-CoA degradation
Dgeo_1759	PWY-7118	chitin degradation to ethanol
Dgeo_1762	PWY-6823	molybdenum cofactor biosynthesis
Dgeo_1771	PWY-40	putrescine biosynthesis I
Dgeo_1771	PWY-43	putrescine biosynthesis II
Dgeo_1771	PWY-6305	putrescine biosynthesis IV
Dgeo_1771	PWY-6834	spermidine biosynthesis III
Dgeo_1774	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
Dgeo_1774	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Dgeo_1774	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
Dgeo_1774	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
Dgeo_1774	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Dgeo_1774	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Dgeo_1774	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
Dgeo_1774	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
Dgeo_1775	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
Dgeo_1775	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Dgeo_1775	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
Dgeo_1775	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
Dgeo_1775	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Dgeo_1775	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Dgeo_1775	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
Dgeo_1775	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
Dgeo_1782	PWY-2941	L-lysine biosynthesis II
Dgeo_1782	PWY-2942	L-lysine biosynthesis III
Dgeo_1782	PWY-5097	L-lysine biosynthesis VI
Dgeo_1782	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Dgeo_1782	PWY-6559	spermidine biosynthesis II
Dgeo_1782	PWY-6562	norspermidine biosynthesis
Dgeo_1782	PWY-7153	grixazone biosynthesis
Dgeo_1782	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Dgeo_1809	PWY-5523	5,6-dimethylbenzimidazole biosynthesis
Dgeo_1809	PWY-6167	flavin biosynthesis II (archaea)
Dgeo_1809	PWY-6168	flavin biosynthesis III (fungi)
Dgeo_1821	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
Dgeo_1821	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
Dgeo_1821	PWY-6164	3-dehydroquinate biosynthesis I
Dgeo_1846	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Dgeo_1875	PWY-2723	trehalose degradation V
Dgeo_1875	PWY-3801	sucrose degradation II (sucrose synthase)
Dgeo_1875	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
Dgeo_1875	PWY-5661	GDP-glucose biosynthesis
Dgeo_1875	PWY-5661-1	Dgeo_1875
Dgeo_1875	PWY-5940	streptomycin biosynthesis
Dgeo_1875	PWY-5941	glycogen degradation II (eukaryotic)
Dgeo_1875	PWY-622	starch biosynthesis
Dgeo_1875	PWY-6731	starch degradation III
Dgeo_1875	PWY-6737	starch degradation V
Dgeo_1875	PWY-6749	CMP-legionaminate biosynthesis I
Dgeo_1875	PWY-7238	sucrose biosynthesis II
Dgeo_1875	PWY-7343	UDP-glucose biosynthesis
Dgeo_1876	PWY-5484	glycolysis II (from fructose 6-phosphate)
Dgeo_1878	PWY-6785	hydrogen production VIII
Dgeo_1880	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
Dgeo_1887	PWY-6891	thiazole biosynthesis II (Bacillus)
Dgeo_1887	PWY-6892	thiazole biosynthesis I (E. coli)
Dgeo_1887	PWY-7560	methylerythritol phosphate pathway II
Dgeo_1919	PWY-6910	hydroxymethylpyrimidine salvage
Dgeo_1919	PWY-7356	thiamin salvage IV (yeast)
Dgeo_1919	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
Dgeo_1921	PWY-6891	thiazole biosynthesis II (Bacillus)
Dgeo_1921	PWY-6892	thiazole biosynthesis I (E. coli)
Dgeo_1923	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
Dgeo_1923	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
Dgeo_1923	PWY-6897	thiamin salvage II
Dgeo_1923	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
Dgeo_1923	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
Dgeo_1923	PWY-7353	4-methyl-5(&beta;-hydroxyethyl)thiazole salvage (yeast)
Dgeo_1923	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
Dgeo_1924	PWY-6890	4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis
Dgeo_1927	PWY-6012	acyl carrier protein metabolism I
Dgeo_1927	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
Dgeo_1939	PWY-6898	thiamin salvage III
Dgeo_1939	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
Dgeo_1939	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
Dgeo_1942	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Dgeo_1944	PWY-6823	molybdenum cofactor biosynthesis
Dgeo_1952	PWY-6823	molybdenum cofactor biosynthesis
Dgeo_1952	PWY-6891	thiazole biosynthesis II (Bacillus)
Dgeo_1952	PWY-6892	thiazole biosynthesis I (E. coli)
Dgeo_1952	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
Dgeo_1967	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
Dgeo_1974	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
Dgeo_1976	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
Dgeo_1976	PWY-6855	chitin degradation I (archaea)
Dgeo_1976	PWY-6906	chitin derivatives degradation
Dgeo_1982	PWY-5663	tetrahydrobiopterin biosynthesis I
Dgeo_1982	PWY-5664	tetrahydrobiopterin biosynthesis II
Dgeo_1982	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
Dgeo_1982	PWY-6703	preQ<sub>0</sub> biosynthesis
Dgeo_1982	PWY-6983	tetrahydrobiopterin biosynthesis III
Dgeo_1982	PWY-7442	drosopterin and aurodrosopterin biosynthesis
Dgeo_1983	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
Dgeo_1983	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Dgeo_1983	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
Dgeo_1983	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
Dgeo_1983	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
Dgeo_1983	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
Dgeo_1988	PWY-622	starch biosynthesis
Dgeo_1998	PWY-5198	factor 420 biosynthesis
Dgeo_2027	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
Dgeo_2043	PWY-5667	CDP-diacylglycerol biosynthesis I
Dgeo_2043	PWY-5981	CDP-diacylglycerol biosynthesis III
Dgeo_2046	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Dgeo_2047	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Dgeo_2060	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Dgeo_2060	PWY-5686	UMP biosynthesis
Dgeo_2060	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Dgeo_2065	PWY-4983	L-citrulline-nitric oxide cycle
Dgeo_2065	PWY-4984	urea cycle
Dgeo_2065	PWY-5	canavanine biosynthesis
Dgeo_2065	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Dgeo_2065	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Dgeo_2067	PWY-4983	L-citrulline-nitric oxide cycle
Dgeo_2067	PWY-4984	urea cycle
Dgeo_2067	PWY-5	canavanine biosynthesis
Dgeo_2067	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Dgeo_2067	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Dgeo_2070	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Dgeo_2070	PWY-5686	UMP biosynthesis
Dgeo_2070	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Dgeo_2083	PWY-1042	glycolysis IV (plant cytosol)
Dgeo_2083	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Dgeo_2083	PWY-5484	glycolysis II (from fructose 6-phosphate)
Dgeo_2083	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Dgeo_2083	PWY-7385	1,3-propanediol biosynthesis (engineered)
Dgeo_2085	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Dgeo_2085	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Dgeo_2097	PWY-5198	factor 420 biosynthesis
Dgeo_2097	PWY-7371	1,4-dihydroxy-6-naphthoate biosynthesis II
Dgeo_2097	PWY-7374	1,4-dihydroxy-6-naphthoate biosynthesis I
Dgeo_2099	PWY-7371	1,4-dihydroxy-6-naphthoate biosynthesis II
Dgeo_2099	PWY-7374	1,4-dihydroxy-6-naphthoate biosynthesis I
Dgeo_2104	PWY-6807	xyloglucan degradation II (exoglucanase)
Dgeo_2121	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Dgeo_2121	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Dgeo_2128	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Dgeo_2129	PWY-5194	siroheme biosynthesis
Dgeo_2129	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
Dgeo_2131	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Dgeo_2131	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
Dgeo_2131	PWY-5194	siroheme biosynthesis
Dgeo_2131	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
Dgeo_2133	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Dgeo_2140	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
Dgeo_2140	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
Dgeo_2161	PWY-1622	formaldehyde assimilation I (serine pathway)
Dgeo_2161	PWY-5392	reductive TCA cycle II
Dgeo_2161	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
Dgeo_2161	PWY-5690	TCA cycle II (plants and fungi)
Dgeo_2161	PWY-5913	TCA cycle VI (obligate autotrophs)
Dgeo_2161	PWY-6728	methylaspartate cycle
Dgeo_2161	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Dgeo_2161	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
Dgeo_2161	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
Dgeo_2175	PWY-7310	D-glucosaminate degradation
Dgeo_2176	PWY-4381	fatty acid biosynthesis initiation I
Dgeo_2176	PWY-5743	3-hydroxypropanoate cycle
Dgeo_2176	PWY-5744	glyoxylate assimilation
Dgeo_2176	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Dgeo_2176	PWY-6679	jadomycin biosynthesis
Dgeo_2176	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Dgeo_2177	PWY-4381	fatty acid biosynthesis initiation I
Dgeo_2177	PWY-5743	3-hydroxypropanoate cycle
Dgeo_2177	PWY-5744	glyoxylate assimilation
Dgeo_2177	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Dgeo_2177	PWY-6679	jadomycin biosynthesis
Dgeo_2177	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Dgeo_2180	PWY-7181	pyrimidine deoxyribonucleosides degradation
Dgeo_2188	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Dgeo_2193	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
Dgeo_2193	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Dgeo_2193	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
Dgeo_2193	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
Dgeo_2206	PWY-5350	thiosulfate disproportionation III (rhodanese)
Dgeo_2209	PWY-7206	pyrimidine deoxyribonucleotides dephosphorylation
Dgeo_2220	PWY-7205	CMP phosphorylation
Dgeo_2232	PWY-1042	glycolysis IV (plant cytosol)
Dgeo_2232	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
Dgeo_2232	PWY-5484	glycolysis II (from fructose 6-phosphate)
Dgeo_2232	PWY-5723	Rubisco shunt
Dgeo_2232	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Dgeo_2232	PWY-6886	1-butanol autotrophic biosynthesis
Dgeo_2232	PWY-6901	superpathway of glucose and xylose degradation
Dgeo_2232	PWY-7003	glycerol degradation to butanol
Dgeo_2232	PWY-7124	ethylene biosynthesis V (engineered)
Dgeo_2232	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
Dgeo_2242	PWY-3821	galactose degradation III
Dgeo_2242	PWY-6317	galactose degradation I (Leloir pathway)
Dgeo_2242	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
Dgeo_2242	PWY-6527	stachyose degradation
Dgeo_2242	PWY-7328	superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
Dgeo_2242	PWY-7344	UDP-D-galactose biosynthesis
Dgeo_2248	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
Dgeo_2248	PWY-6153	autoinducer AI-2 biosynthesis I
Dgeo_2248	PWY-6154	autoinducer AI-2 biosynthesis II (<i>Vibrio</i>)
Dgeo_2253	PWY-702	L-methionine biosynthesis II
Dgeo_2283	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Dgeo_2283	PWY-5723	Rubisco shunt
Dgeo_2283	PWY-6891	thiazole biosynthesis II (Bacillus)
Dgeo_2283	PWY-6892	thiazole biosynthesis I (E. coli)
Dgeo_2283	PWY-6901	superpathway of glucose and xylose degradation
Dgeo_2283	PWY-7560	methylerythritol phosphate pathway II
Dgeo_2284	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
Dgeo_2323	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
Dgeo_2323	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
Dgeo_2328	PWY-5392	reductive TCA cycle II
Dgeo_2328	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
Dgeo_2328	PWY-5690	TCA cycle II (plants and fungi)
Dgeo_2328	PWY-5913	TCA cycle VI (obligate autotrophs)
Dgeo_2328	PWY-6728	methylaspartate cycle
Dgeo_2328	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Dgeo_2328	PWY-7254	TCA cycle VII (acetate-producers)
Dgeo_2328	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
