Deipe_0012	PWY-7396	butanol and isobutanol biosynthesis (engineered)
Deipe_0013	PWY-5101	L-isoleucine biosynthesis II
Deipe_0013	PWY-5103	L-isoleucine biosynthesis III
Deipe_0013	PWY-5104	L-isoleucine biosynthesis IV
Deipe_0013	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
Deipe_0013	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
Deipe_0013	PWY-6389	(<i>S</i>)-acetoin biosynthesis
Deipe_0013	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Deipe_0014	PWY-5101	L-isoleucine biosynthesis II
Deipe_0014	PWY-5103	L-isoleucine biosynthesis III
Deipe_0014	PWY-5104	L-isoleucine biosynthesis IV
Deipe_0014	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
Deipe_0014	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
Deipe_0014	PWY-6389	(<i>S</i>)-acetoin biosynthesis
Deipe_0014	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Deipe_0015	PWY-5101	L-isoleucine biosynthesis II
Deipe_0015	PWY-5103	L-isoleucine biosynthesis III
Deipe_0015	PWY-5104	L-isoleucine biosynthesis IV
Deipe_0015	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Deipe_0016	PWY-6871	3-methylbutanol biosynthesis
Deipe_0019	PWY-5101	L-isoleucine biosynthesis II
Deipe_0019	PWY-5103	L-isoleucine biosynthesis III
Deipe_0019	PWY-5104	L-isoleucine biosynthesis IV
Deipe_0019	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Deipe_0025	PWY-7437	protein <i>O</i>-[<i>N</i>-acetyl]-glucosylation
Deipe_0031	PWY-621	sucrose degradation III (sucrose invertase)
Deipe_0032	PWY-7437	protein <i>O</i>-[<i>N</i>-acetyl]-glucosylation
Deipe_0036	PWY-6807	xyloglucan degradation II (exoglucanase)
Deipe_0038	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Deipe_0038	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Deipe_0047	PWY-6478	GDP-D-<i>glycero</i>-&alpha;-D-<i>manno</i>-heptose biosynthesis
Deipe_0055	PWY-6906	chitin derivatives degradation
Deipe_0055	PWY-7077	<i>N</i>-acetyl-D-galactosamine degradation
Deipe_0055	PWY-7395	D-galactosamine and <i>N</i>-acetyl-D-galactosamine degradation
Deipe_0063	PWY-6807	xyloglucan degradation II (exoglucanase)
Deipe_0077	PWY-5691	urate degradation to allantoin I
Deipe_0077	PWY-7394	urate degradation to allantoin II
Deipe_0078	PWY-5691	urate degradation to allantoin I
Deipe_0079	PWY-5691	urate degradation to allantoin I
Deipe_0079	PWY-7394	urate degradation to allantoin II
Deipe_0081	PWY-5497	purine nucleobases degradation II (anaerobic)
Deipe_0081	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
Deipe_0081	PWY-6538	caffeine degradation III (bacteria, via demethylation)
Deipe_0081	PWY-6596	adenosine nucleotides degradation I
Deipe_0081	PWY-6606	guanosine nucleotides degradation II
Deipe_0081	PWY-6607	guanosine nucleotides degradation I
Deipe_0081	PWY-6608	guanosine nucleotides degradation III
Deipe_0081	PWY-6999	theophylline degradation
Deipe_0097	PWY-5913	TCA cycle VI (obligate autotrophs)
Deipe_0097	PWY-6549	L-glutamine biosynthesis III
Deipe_0097	PWY-6728	methylaspartate cycle
Deipe_0097	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Deipe_0097	PWY-7124	ethylene biosynthesis V (engineered)
Deipe_0097	PWY-7254	TCA cycle VII (acetate-producers)
Deipe_0097	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
Deipe_0105	PWY-1881	formate oxidation to CO<sub>2</sub>
Deipe_0105	PWY-5497	purine nucleobases degradation II (anaerobic)
Deipe_0105	PWY-6696	oxalate degradation III
Deipe_0112	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
Deipe_0113	PWY-4202	arsenate detoxification I (glutaredoxin)
Deipe_0113	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
Deipe_0113	PWY-6608	guanosine nucleotides degradation III
Deipe_0113	PWY-6609	adenine and adenosine salvage III
Deipe_0113	PWY-6611	adenine and adenosine salvage V
Deipe_0113	PWY-6620	guanine and guanosine salvage
Deipe_0113	PWY-6627	salinosporamide A biosynthesis
Deipe_0113	PWY-6644	fluoroacetate and fluorothreonine biosynthesis
Deipe_0113	PWY-7179	purine deoxyribonucleosides degradation I
Deipe_0113	PWY-7179-1	purine deoxyribonucleosides degradation
Deipe_0117	PWY-7180	2'-deoxy-&alpha;-D-ribose 1-phosphate degradation
Deipe_0126	PWY-5381	pyridine nucleotide cycling (plants)
Deipe_0149	PWY-5697	allantoin degradation to ureidoglycolate I (urea producing)
Deipe_0149	PWY-5698	allantoin degradation to ureidoglycolate II (ammonia producing)
Deipe_0151	PWY-6728	methylaspartate cycle
Deipe_0151	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Deipe_0151	PWY-7118	chitin degradation to ethanol
Deipe_0151	PWY-7294	xylose degradation IV
Deipe_0151	PWY-7295	L-arabinose degradation IV
Deipe_0154	PWY-6728	methylaspartate cycle
Deipe_0154	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Deipe_0154	PWY-7118	chitin degradation to ethanol
Deipe_0154	PWY-7294	xylose degradation IV
Deipe_0154	PWY-7295	L-arabinose degradation IV
Deipe_0180	PWY-7158	L-phenylalanine degradation V
Deipe_0183	PWY-5651	L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
Deipe_0183	PWY-6309	L-tryptophan degradation XI (mammalian, via kynurenine)
Deipe_0184	PWY-5651	L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
Deipe_0184	PWY-6309	L-tryptophan degradation XI (mammalian, via kynurenine)
Deipe_0192	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Deipe_0192	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Deipe_0194	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
Deipe_0194	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
Deipe_0194	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
Deipe_0195	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Deipe_0195	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Deipe_0197	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
Deipe_0197	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
Deipe_0197	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
Deipe_0197	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
Deipe_0198	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Deipe_0198	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Deipe_0199	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Deipe_0199	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Deipe_0204	PWY-5523	5,6-dimethylbenzimidazole biosynthesis
Deipe_0204	PWY-6167	flavin biosynthesis II (archaea)
Deipe_0204	PWY-6168	flavin biosynthesis III (fungi)
Deipe_0205	PWY-6910	hydroxymethylpyrimidine salvage
Deipe_0205	PWY-7356	thiamin salvage IV (yeast)
Deipe_0205	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
Deipe_0206	PWY-6891	thiazole biosynthesis II (Bacillus)
Deipe_0206	PWY-6892	thiazole biosynthesis I (E. coli)
Deipe_0208	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
Deipe_0208	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
Deipe_0208	PWY-6897	thiamin salvage II
Deipe_0208	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
Deipe_0208	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
Deipe_0208	PWY-7353	4-methyl-5(&beta;-hydroxyethyl)thiazole salvage (yeast)
Deipe_0208	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
Deipe_0209	PWY-6890	4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis
Deipe_0212	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
Deipe_0227	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
Deipe_0227	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
Deipe_0237	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Deipe_0241	PWY-7039	phosphatidate metabolism, as a signaling molecule
Deipe_0243	PWY-6556	pyrimidine ribonucleosides salvage II
Deipe_0243	PWY-7181	pyrimidine deoxyribonucleosides degradation
Deipe_0243	PWY-7193	pyrimidine ribonucleosides salvage I
Deipe_0243	PWY-7199	pyrimidine deoxyribonucleosides salvage
Deipe_0256	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Deipe_0256	PWY-5723	Rubisco shunt
Deipe_0258	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Deipe_0258	PWY-5723	Rubisco shunt
Deipe_0260	PWY-7180	2'-deoxy-&alpha;-D-ribose 1-phosphate degradation
Deipe_0274	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
Deipe_0276	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
Deipe_0276	PWY-6855	chitin degradation I (archaea)
Deipe_0276	PWY-6906	chitin derivatives degradation
Deipe_0281	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
Deipe_0281	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Deipe_0281	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
Deipe_0281	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
Deipe_0281	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
Deipe_0281	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
Deipe_0282	PWY-5663	tetrahydrobiopterin biosynthesis I
Deipe_0282	PWY-5664	tetrahydrobiopterin biosynthesis II
Deipe_0282	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
Deipe_0282	PWY-6703	preQ<sub>0</sub> biosynthesis
Deipe_0282	PWY-6983	tetrahydrobiopterin biosynthesis III
Deipe_0282	PWY-7442	drosopterin and aurodrosopterin biosynthesis
Deipe_0293	PWY-6829	tRNA methylation (yeast)
Deipe_0293	PWY-7285	methylwyosine biosynthesis
Deipe_0293	PWY-7286	7-(3-amino-3-carboxypropyl)-wyosine biosynthesis
Deipe_0298	PWY-101	photosynthesis light reactions
Deipe_0298	PWY-7230	ubiquinol-6 biosynthesis from 4-aminobenzoate (eukaryotic)
Deipe_0301	PWY-381	nitrate reduction II (assimilatory)
Deipe_0301	PWY-5675	nitrate reduction V (assimilatory)
Deipe_0301	PWY-6549	L-glutamine biosynthesis III
Deipe_0301	PWY-6963	ammonia assimilation cycle I
Deipe_0301	PWY-6964	ammonia assimilation cycle II
Deipe_0315	PWY-3801	sucrose degradation II (sucrose synthase)
Deipe_0315	PWY-5054	sorbitol biosynthesis I
Deipe_0315	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
Deipe_0315	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
Deipe_0315	PWY-5659	GDP-mannose biosynthesis
Deipe_0315	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Deipe_0315	PWY-621	sucrose degradation III (sucrose invertase)
Deipe_0315	PWY-622	starch biosynthesis
Deipe_0315	PWY-6531	mannitol cycle
Deipe_0315	PWY-6981	chitin biosynthesis
Deipe_0315	PWY-7238	sucrose biosynthesis II
Deipe_0315	PWY-7347	sucrose biosynthesis III
Deipe_0315	PWY-7385	1,3-propanediol biosynthesis (engineered)
Deipe_0327	PWY-1281	sulfoacetaldehyde degradation I
Deipe_0327	PWY-5482	pyruvate fermentation to acetate II
Deipe_0327	PWY-5485	pyruvate fermentation to acetate IV
Deipe_0327	PWY-5497	purine nucleobases degradation II (anaerobic)
Deipe_0327	PWY-6637	sulfolactate degradation II
Deipe_0328	PWY-5482	pyruvate fermentation to acetate II
Deipe_0328	PWY-5485	pyruvate fermentation to acetate IV
Deipe_0328	PWY-5497	purine nucleobases degradation II (anaerobic)
Deipe_0334	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
Deipe_0334	PWY-6596	adenosine nucleotides degradation I
Deipe_0334	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
Deipe_0350	PWY-3821	galactose degradation III
Deipe_0350	PWY-6317	galactose degradation I (Leloir pathway)
Deipe_0350	PWY-6527	stachyose degradation
Deipe_0352	PWY-6317	galactose degradation I (Leloir pathway)
Deipe_0352	PWY-6527	stachyose degradation
Deipe_0353	PWY-6807	xyloglucan degradation II (exoglucanase)
Deipe_0368	PWY-6784	cellulose and hemicellulose degradation (cellulolosome)
Deipe_0373	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
Deipe_0375	PWY-5958	acridone alkaloid biosynthesis
Deipe_0375	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
Deipe_0375	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
Deipe_0377	PWY-5958	acridone alkaloid biosynthesis
Deipe_0377	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
Deipe_0377	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
Deipe_0378	PWY-6502	oxidized GTP and dGTP detoxification
Deipe_0384	PWY-6891	thiazole biosynthesis II (Bacillus)
Deipe_0384	PWY-6892	thiazole biosynthesis I (E. coli)
Deipe_0384	PWY-7560	methylerythritol phosphate pathway II
Deipe_0385	PWY-5941	glycogen degradation II (eukaryotic)
Deipe_0385	PWY-622	starch biosynthesis
Deipe_0385	PWY-6731	starch degradation III
Deipe_0385	PWY-6737	starch degradation V
Deipe_0385	PWY-7238	sucrose biosynthesis II
Deipe_0392	PWY-6832	2-aminoethylphosphonate degradation II
Deipe_0404	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
Deipe_0423	PWY-4381	fatty acid biosynthesis initiation I
Deipe_0423	PWY-5743	3-hydroxypropanoate cycle
Deipe_0423	PWY-5744	glyoxylate assimilation
Deipe_0423	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Deipe_0423	PWY-6679	jadomycin biosynthesis
Deipe_0423	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Deipe_0435	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Deipe_0435	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Deipe_0513	PWY-6854	ethylene biosynthesis III (microbes)
Deipe_0542	PWY-6654	phosphopantothenate biosynthesis III
Deipe_0547	PWY-3781	aerobic respiration I (cytochrome c)
Deipe_0547	PWY-4521	arsenite oxidation I (respiratory)
Deipe_0547	PWY-6692	Fe(II) oxidation
Deipe_0547	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Deipe_0560	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
Deipe_0560	PWY-3461	L-tyrosine biosynthesis II
Deipe_0560	PWY-3462	L-phenylalanine biosynthesis II
Deipe_0560	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
Deipe_0560	PWY-6120	L-tyrosine biosynthesis III
Deipe_0560	PWY-6164	3-dehydroquinate biosynthesis I
Deipe_0560	PWY-6627	salinosporamide A biosynthesis
Deipe_0563	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
Deipe_0569	PWY-5101	L-isoleucine biosynthesis II
Deipe_0569	PWY-6871	3-methylbutanol biosynthesis
Deipe_0570	PWY-1361	benzoyl-CoA degradation I (aerobic)
Deipe_0570	PWY-5109	2-methylbutanoate biosynthesis
Deipe_0570	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
Deipe_0570	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
Deipe_0570	PWY-5177	glutaryl-CoA degradation
Deipe_0570	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Deipe_0570	PWY-6435	4-hydroxybenzoate biosynthesis V
Deipe_0570	PWY-6583	pyruvate fermentation to butanol I
Deipe_0570	PWY-6863	pyruvate fermentation to hexanol
Deipe_0570	PWY-6883	pyruvate fermentation to butanol II
Deipe_0570	PWY-6944	androstenedione degradation
Deipe_0570	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
Deipe_0570	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
Deipe_0570	PWY-7007	methyl ketone biosynthesis
Deipe_0570	PWY-7046	4-coumarate degradation (anaerobic)
Deipe_0570	PWY-7094	fatty acid salvage
Deipe_0570	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
Deipe_0570	PWY-735	jasmonic acid biosynthesis
Deipe_0570	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
Deipe_0591	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Deipe_0591	PWY-5723	Rubisco shunt
Deipe_0603	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
Deipe_0603	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
Deipe_0603	PWY-6269	adenosylcobalamin salvage from cobinamide II
Deipe_0607	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
Deipe_0607	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
Deipe_0607	PWY-6269	adenosylcobalamin salvage from cobinamide II
Deipe_0619	PWY-4381	fatty acid biosynthesis initiation I
Deipe_0619	PWY-5743	3-hydroxypropanoate cycle
Deipe_0619	PWY-5744	glyoxylate assimilation
Deipe_0619	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Deipe_0619	PWY-6679	jadomycin biosynthesis
Deipe_0619	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Deipe_0620	PWY-4381	fatty acid biosynthesis initiation I
Deipe_0620	PWY-5743	3-hydroxypropanoate cycle
Deipe_0620	PWY-5744	glyoxylate assimilation
Deipe_0620	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Deipe_0620	PWY-6679	jadomycin biosynthesis
Deipe_0620	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Deipe_0622	PWY-7181	pyrimidine deoxyribonucleosides degradation
Deipe_0624	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
Deipe_0633	PWY-1622	formaldehyde assimilation I (serine pathway)
Deipe_0633	PWY-5392	reductive TCA cycle II
Deipe_0633	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
Deipe_0633	PWY-5690	TCA cycle II (plants and fungi)
Deipe_0633	PWY-5913	TCA cycle VI (obligate autotrophs)
Deipe_0633	PWY-6728	methylaspartate cycle
Deipe_0633	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Deipe_0633	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
Deipe_0633	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
Deipe_0639	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
Deipe_0639	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
Deipe_0640	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
Deipe_0640	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
Deipe_0640	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
Deipe_0662	PWY-6823	molybdenum cofactor biosynthesis
Deipe_0663	PWY-6823	molybdenum cofactor biosynthesis
Deipe_0712	PWY-6123	inosine-5'-phosphate biosynthesis I
Deipe_0712	PWY-6124	inosine-5'-phosphate biosynthesis II
Deipe_0712	PWY-7234	inosine-5'-phosphate biosynthesis III
Deipe_0713	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Deipe_0713	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
Deipe_0713	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
Deipe_0714	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Deipe_0714	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
Deipe_0714	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
Deipe_0717	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Deipe_0717	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
Deipe_0717	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
Deipe_0718	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Deipe_0718	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
Deipe_0718	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
Deipe_0718	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
Deipe_0723	PWY-381	nitrate reduction II (assimilatory)
Deipe_0723	PWY-5675	nitrate reduction V (assimilatory)
Deipe_0723	PWY-6549	L-glutamine biosynthesis III
Deipe_0723	PWY-6963	ammonia assimilation cycle I
Deipe_0723	PWY-6964	ammonia assimilation cycle II
Deipe_0732	PWY-2723	trehalose degradation V
Deipe_0732	PWY-3801	sucrose degradation II (sucrose synthase)
Deipe_0732	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
Deipe_0732	PWY-5661	GDP-glucose biosynthesis
Deipe_0732	PWY-5661-1	Deipe_0732
Deipe_0732	PWY-5940	streptomycin biosynthesis
Deipe_0732	PWY-5941	glycogen degradation II (eukaryotic)
Deipe_0732	PWY-622	starch biosynthesis
Deipe_0732	PWY-6731	starch degradation III
Deipe_0732	PWY-6737	starch degradation V
Deipe_0732	PWY-6749	CMP-legionaminate biosynthesis I
Deipe_0732	PWY-7238	sucrose biosynthesis II
Deipe_0732	PWY-7343	UDP-glucose biosynthesis
Deipe_0761	PWY-4261	glycerol degradation I
Deipe_0776	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Deipe_0776	PWY-5723	Rubisco shunt
Deipe_0776	PWY-6891	thiazole biosynthesis II (Bacillus)
Deipe_0776	PWY-6892	thiazole biosynthesis I (E. coli)
Deipe_0776	PWY-6901	superpathway of glucose and xylose degradation
Deipe_0776	PWY-7560	methylerythritol phosphate pathway II
Deipe_0777	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Deipe_0777	PWY-5723	Rubisco shunt
Deipe_0778	PWY-6527	stachyose degradation
Deipe_0816	PWY-1361	benzoyl-CoA degradation I (aerobic)
Deipe_0816	PWY-5109	2-methylbutanoate biosynthesis
Deipe_0816	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
Deipe_0816	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
Deipe_0816	PWY-5177	glutaryl-CoA degradation
Deipe_0816	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Deipe_0816	PWY-6435	4-hydroxybenzoate biosynthesis V
Deipe_0816	PWY-6583	pyruvate fermentation to butanol I
Deipe_0816	PWY-6863	pyruvate fermentation to hexanol
Deipe_0816	PWY-6883	pyruvate fermentation to butanol II
Deipe_0816	PWY-6944	androstenedione degradation
Deipe_0816	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
Deipe_0816	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
Deipe_0816	PWY-7007	methyl ketone biosynthesis
Deipe_0816	PWY-7046	4-coumarate degradation (anaerobic)
Deipe_0816	PWY-7094	fatty acid salvage
Deipe_0816	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
Deipe_0816	PWY-735	jasmonic acid biosynthesis
Deipe_0816	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
Deipe_0831	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Deipe_0833	PWY-5663	tetrahydrobiopterin biosynthesis I
Deipe_0833	PWY-5664	tetrahydrobiopterin biosynthesis II
Deipe_0833	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
Deipe_0833	PWY-6703	preQ<sub>0</sub> biosynthesis
Deipe_0833	PWY-6983	tetrahydrobiopterin biosynthesis III
Deipe_0833	PWY-7442	drosopterin and aurodrosopterin biosynthesis
Deipe_0834	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Deipe_0838	PWY-7193	pyrimidine ribonucleosides salvage I
Deipe_0878	PWY-2941	L-lysine biosynthesis II
Deipe_0878	PWY-2942	L-lysine biosynthesis III
Deipe_0878	PWY-5097	L-lysine biosynthesis VI
Deipe_0884	PWY-7431	aromatic biogenic amine degradation (bacteria)
Deipe_0896	PWY-2941	L-lysine biosynthesis II
Deipe_0896	PWY-2942	L-lysine biosynthesis III
Deipe_0896	PWY-5097	L-lysine biosynthesis VI
Deipe_0896	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Deipe_0896	PWY-6559	spermidine biosynthesis II
Deipe_0896	PWY-6562	norspermidine biosynthesis
Deipe_0896	PWY-7153	grixazone biosynthesis
Deipe_0896	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Deipe_0898	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
Deipe_0898	PWY-7328	superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
Deipe_0904	PWY-5344	L-homocysteine biosynthesis
Deipe_0904	PWY-7174	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation II
Deipe_0905	PWY-6807	xyloglucan degradation II (exoglucanase)
Deipe_0913	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
Deipe_0914	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
Deipe_0915	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
Deipe_0915	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
Deipe_0922	PWY-7335	UDP-<i>N</i>-acetyl-&alpha;-D-mannosaminouronate biosynthesis
Deipe_0924	PWY-3821	galactose degradation III
Deipe_0924	PWY-6317	galactose degradation I (Leloir pathway)
Deipe_0924	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
Deipe_0924	PWY-6527	stachyose degradation
Deipe_0924	PWY-7328	superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
Deipe_0924	PWY-7344	UDP-D-galactose biosynthesis
Deipe_0941	PWY-5659	GDP-mannose biosynthesis
Deipe_0941	PWY-6073	alginate biosynthesis I (algal)
Deipe_0941	PWY-6082	alginate biosynthesis II (bacterial)
Deipe_0941	PWY-882	L-ascorbate biosynthesis I (L-galactose pathway)
Deipe_0942	PWY-7374	1,4-dihydroxy-6-naphthoate biosynthesis I
Deipe_0943	PWY-5686	UMP biosynthesis
Deipe_0947	PWY-6672	<i>cis</i>-genanyl-CoA degradation
Deipe_0947	PWY-7118	chitin degradation to ethanol
Deipe_0988	PWY-5686	UMP biosynthesis
Deipe_0992	PWY-4041	&gamma;-glutamyl cycle
Deipe_0992	PWY-5826	hypoglycin biosynthesis
Deipe_1006	PWY-6749	CMP-legionaminate biosynthesis I
Deipe_1014	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Deipe_1014	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Deipe_1020	PWY-5030	L-histidine degradation III
Deipe_1020	PWY-5497	purine nucleobases degradation II (anaerobic)
Deipe_1025	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Deipe_1031	PWY-7560	methylerythritol phosphate pathway II
Deipe_1074	PWY-3121	linamarin degradation
Deipe_1074	PWY-5176	coumarin biosynthesis (via 2-coumarate)
Deipe_1074	PWY-6002	lotaustralin degradation
Deipe_1074	PWY-6788	cellulose degradation II (fungi)
Deipe_1074	PWY-7089	taxiphyllin bioactivation
Deipe_1074	PWY-7091	linustatin bioactivation
Deipe_1074	PWY-7092	neolinustatin bioactivation
Deipe_1101	PWY-5367	petroselinate biosynthesis
Deipe_1101	PWY-5971	palmitate biosynthesis II (bacteria and plants)
Deipe_1101	PWY-5973	<i>cis</i>-vaccenate biosynthesis
Deipe_1101	PWY-5989	stearate biosynthesis II (bacteria and plants)
Deipe_1101	PWY-5994	palmitate biosynthesis I (animals and fungi)
Deipe_1101	PWY-6113	superpathway of mycolate biosynthesis
Deipe_1101	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
Deipe_1101	PWY-6519	8-amino-7-oxononanoate biosynthesis I
Deipe_1101	PWY-6951	Deipe_1101
Deipe_1101	PWY-7053	docosahexaenoate biosynthesis I (lower eukaryotes)
Deipe_1101	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Deipe_1101	PWYG-321	mycolate biosynthesis
Deipe_1102	PWY-4381	fatty acid biosynthesis initiation I
Deipe_1102	PWY-6799	fatty acid biosynthesis (plant mitochondria)
Deipe_1102	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Deipe_1103	PWY-4381	fatty acid biosynthesis initiation I
Deipe_1109	PWY-31	canavanine degradation
Deipe_1109	PWY-4984	urea cycle
Deipe_1109	PWY-6305	putrescine biosynthesis IV
Deipe_1109	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
Deipe_1114	PWY-2161	folate polyglutamylation
Deipe_1117	PWY-6700	queuosine biosynthesis
Deipe_1128	PWY-1042	glycolysis IV (plant cytosol)
Deipe_1128	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
Deipe_1128	PWY-5484	glycolysis II (from fructose 6-phosphate)
Deipe_1128	PWY-5723	Rubisco shunt
Deipe_1128	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Deipe_1128	PWY-6886	1-butanol autotrophic biosynthesis
Deipe_1128	PWY-6901	superpathway of glucose and xylose degradation
Deipe_1128	PWY-7003	glycerol degradation to butanol
Deipe_1128	PWY-7124	ethylene biosynthesis V (engineered)
Deipe_1128	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
Deipe_1175	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
Deipe_1175	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
Deipe_1194	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
Deipe_1204	PWY-1361	benzoyl-CoA degradation I (aerobic)
Deipe_1204	PWY-5109	2-methylbutanoate biosynthesis
Deipe_1204	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
Deipe_1204	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
Deipe_1204	PWY-5177	glutaryl-CoA degradation
Deipe_1204	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Deipe_1204	PWY-6435	4-hydroxybenzoate biosynthesis V
Deipe_1204	PWY-6583	pyruvate fermentation to butanol I
Deipe_1204	PWY-6863	pyruvate fermentation to hexanol
Deipe_1204	PWY-6883	pyruvate fermentation to butanol II
Deipe_1204	PWY-6944	androstenedione degradation
Deipe_1204	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
Deipe_1204	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
Deipe_1204	PWY-7007	methyl ketone biosynthesis
Deipe_1204	PWY-7046	4-coumarate degradation (anaerobic)
Deipe_1204	PWY-7094	fatty acid salvage
Deipe_1204	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
Deipe_1204	PWY-735	jasmonic acid biosynthesis
Deipe_1204	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
Deipe_1236	PWY-4261	glycerol degradation I
Deipe_1259	PWY-6164	3-dehydroquinate biosynthesis I
Deipe_1281	PWY-7052	cyanophycin metabolism
Deipe_1283	PWY-7052	cyanophycin metabolism
Deipe_1290	PWY-6788	cellulose degradation II (fungi)
Deipe_1293	PWY-4041	&gamma;-glutamyl cycle
Deipe_1293	PWY-5826	hypoglycin biosynthesis
Deipe_1308	PWY-6507	4-deoxy-L-<i>threo</i>-hex-4-enopyranuronate degradation
Deipe_1328	PWY-5381	pyridine nucleotide cycling (plants)
Deipe_1328	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
Deipe_1328	PWY-6596	adenosine nucleotides degradation I
Deipe_1328	PWY-6606	guanosine nucleotides degradation II
Deipe_1328	PWY-6607	guanosine nucleotides degradation I
Deipe_1328	PWY-6608	guanosine nucleotides degradation III
Deipe_1328	PWY-7185	UTP and CTP dephosphorylation I
Deipe_1336	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
Deipe_1336	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
Deipe_1336	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
Deipe_1345	PWY-2723	trehalose degradation V
Deipe_1345	PWY-6317	galactose degradation I (Leloir pathway)
Deipe_1345	PWY-6737	starch degradation V
Deipe_1353	PWY-5451	acetone degradation I (to methylglyoxal)
Deipe_1353	PWY-6588	pyruvate fermentation to acetone
Deipe_1353	PWY-6876	isopropanol biosynthesis
Deipe_1353	PWY-7466	acetone degradation III (to propane-1,2-diol)
Deipe_1361	PWY-4261	glycerol degradation I
Deipe_1365	PWY-6807	xyloglucan degradation II (exoglucanase)
Deipe_1386	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
Deipe_1386	PWY-5523	5,6-dimethylbenzimidazole biosynthesis
Deipe_1424	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
Deipe_1424	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
Deipe_1424	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
Deipe_1597	PWY-702	L-methionine biosynthesis II
Deipe_1611	PWY-5667	CDP-diacylglycerol biosynthesis I
Deipe_1611	PWY-5981	CDP-diacylglycerol biosynthesis III
Deipe_1620	PWY-3121	linamarin degradation
Deipe_1620	PWY-5176	coumarin biosynthesis (via 2-coumarate)
Deipe_1620	PWY-6002	lotaustralin degradation
Deipe_1620	PWY-6788	cellulose degradation II (fungi)
Deipe_1620	PWY-7089	taxiphyllin bioactivation
Deipe_1620	PWY-7091	linustatin bioactivation
Deipe_1620	PWY-7092	neolinustatin bioactivation
Deipe_1736	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
Deipe_1736	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
Deipe_1761	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
Deipe_1761	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
Deipe_1761	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
Deipe_1761	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
Deipe_1763	PWY-5971	palmitate biosynthesis II (bacteria and plants)
Deipe_1763	PWY-5973	<i>cis</i>-vaccenate biosynthesis
Deipe_1763	PWY-5989	stearate biosynthesis II (bacteria and plants)
Deipe_1763	PWY-5994	palmitate biosynthesis I (animals and fungi)
Deipe_1763	PWY-6113	superpathway of mycolate biosynthesis
Deipe_1763	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
Deipe_1763	PWY-6519	8-amino-7-oxononanoate biosynthesis I
Deipe_1763	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Deipe_1763	PWYG-321	mycolate biosynthesis
Deipe_1775	PWY-5135	xanthohumol biosynthesis
Deipe_1775	PWY-6316	aromatic polyketides biosynthesis
Deipe_1775	PWY-6787	flavonoid biosynthesis (in equisetum)
Deipe_1775	PWY-7397	naringenin biosynthesis (engineered)
Deipe_1810	PWY-4061	glutathione-mediated detoxification I
Deipe_1810	PWY-6842	glutathione-mediated detoxification II
Deipe_1810	PWY-7112	4-hydroxy-2-nonenal detoxification
Deipe_1810	PWY-7533	gliotoxin biosynthesis
Deipe_1815	PWY-5386	methylglyoxal degradation I
Deipe_1842	PWY-2161	folate polyglutamylation
Deipe_1843	PWY-6123	inosine-5'-phosphate biosynthesis I
Deipe_1843	PWY-7234	inosine-5'-phosphate biosynthesis III
Deipe_1851	PWY-7205	CMP phosphorylation
Deipe_1865	PWY-1042	glycolysis IV (plant cytosol)
Deipe_1865	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Deipe_1865	PWY-5484	glycolysis II (from fructose 6-phosphate)
Deipe_1865	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Deipe_1865	PWY-7385	1,3-propanediol biosynthesis (engineered)
Deipe_1876	PWY-1042	glycolysis IV (plant cytosol)
Deipe_1876	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Deipe_1876	PWY-5484	glycolysis II (from fructose 6-phosphate)
Deipe_1876	PWY-7385	1,3-propanediol biosynthesis (engineered)
Deipe_1884	PWY-6807	xyloglucan degradation II (exoglucanase)
Deipe_1911	PWY-3461	L-tyrosine biosynthesis II
Deipe_1911	PWY-3462	L-phenylalanine biosynthesis II
Deipe_1911	PWY-6120	L-tyrosine biosynthesis III
Deipe_1911	PWY-6627	salinosporamide A biosynthesis
Deipe_1911	PWY-7432	L-phenylalanine biosynthesis III (cytosolic, plants)
Deipe_1927	PWY-5451	acetone degradation I (to methylglyoxal)
Deipe_1927	PWY-6588	pyruvate fermentation to acetone
Deipe_1927	PWY-6876	isopropanol biosynthesis
Deipe_1927	PWY-7466	acetone degradation III (to propane-1,2-diol)
Deipe_1942	PWY-1042	glycolysis IV (plant cytosol)
Deipe_1942	PWY-1622	formaldehyde assimilation I (serine pathway)
Deipe_1942	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
Deipe_1942	PWY-5484	glycolysis II (from fructose 6-phosphate)
Deipe_1942	PWY-5723	Rubisco shunt
Deipe_1942	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Deipe_1942	PWY-6886	1-butanol autotrophic biosynthesis
Deipe_1942	PWY-6901	superpathway of glucose and xylose degradation
Deipe_1942	PWY-7003	glycerol degradation to butanol
Deipe_1942	PWY-7124	ethylene biosynthesis V (engineered)
Deipe_1942	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
Deipe_1943	PWY-1042	glycolysis IV (plant cytosol)
Deipe_1943	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
Deipe_1943	PWY-5484	glycolysis II (from fructose 6-phosphate)
Deipe_1943	PWY-5723	Rubisco shunt
Deipe_1943	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Deipe_1943	PWY-6886	1-butanol autotrophic biosynthesis
Deipe_1943	PWY-6901	superpathway of glucose and xylose degradation
Deipe_1943	PWY-7003	glycerol degradation to butanol
Deipe_1943	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
Deipe_1943	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
Deipe_1949	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
Deipe_1949	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Deipe_1949	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
Deipe_1949	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
Deipe_1949	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Deipe_1949	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Deipe_1949	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
Deipe_1949	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
Deipe_2004	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Deipe_2004	PWY-5723	Rubisco shunt
Deipe_2004	PWY-6891	thiazole biosynthesis II (Bacillus)
Deipe_2004	PWY-6892	thiazole biosynthesis I (E. coli)
Deipe_2004	PWY-6901	superpathway of glucose and xylose degradation
Deipe_2004	PWY-7560	methylerythritol phosphate pathway II
Deipe_2005	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
Deipe_2131	PWY-3861	mannitol degradation II
Deipe_2131	PWY-3881	mannitol biosynthesis
Deipe_2131	PWY-5659	GDP-mannose biosynthesis
Deipe_2131	PWY-7456	mannan degradation
Deipe_2131	PWY-882	L-ascorbate biosynthesis I (L-galactose pathway)
Deipe_2145	PWY-5350	thiosulfate disproportionation III (rhodanese)
Deipe_2154	PWY-5971	palmitate biosynthesis II (bacteria and plants)
Deipe_2154	PWY-5973	<i>cis</i>-vaccenate biosynthesis
Deipe_2154	PWY-5989	stearate biosynthesis II (bacteria and plants)
Deipe_2154	PWY-6113	superpathway of mycolate biosynthesis
Deipe_2154	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
Deipe_2154	PWY-6519	8-amino-7-oxononanoate biosynthesis I
Deipe_2154	PWY-7096	triclosan resistance
Deipe_2154	PWYG-321	mycolate biosynthesis
Deipe_2170	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
Deipe_2170	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
Deipe_2170	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
Deipe_2233	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Deipe_2286	PWY-5642	2,4-dinitrotoluene degradation
Deipe_2286	PWY-6373	acrylate degradation
Deipe_2298	PWY-6857	retinol biosynthesis
Deipe_2304	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
Deipe_2304	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
Deipe_2304	PWY-6268	adenosylcobalamin salvage from cobalamin
Deipe_2304	PWY-6269	adenosylcobalamin salvage from cobinamide II
Deipe_2307	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
Deipe_2308	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
Deipe_2310	PWY-5194	siroheme biosynthesis
Deipe_2310	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
Deipe_2311	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
Deipe_2320	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
Deipe_2320	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
Deipe_2320	PWY-6269	adenosylcobalamin salvage from cobinamide II
Deipe_2321	PWY-6857	retinol biosynthesis
Deipe_2332	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Deipe_2332	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Deipe_2336	PWY-6700	queuosine biosynthesis
Deipe_2338	PWY-6703	preQ<sub>0</sub> biosynthesis
Deipe_2339	PWY-6703	preQ<sub>0</sub> biosynthesis
Deipe_2358	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Deipe_2359	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Deipe_2361	PWY-6902	chitin degradation II
Deipe_2372	PWY-3821	galactose degradation III
Deipe_2372	PWY-6317	galactose degradation I (Leloir pathway)
Deipe_2372	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
Deipe_2372	PWY-6527	stachyose degradation
Deipe_2372	PWY-7328	superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
Deipe_2372	PWY-7344	UDP-D-galactose biosynthesis
Deipe_2385	PWY-6167	flavin biosynthesis II (archaea)
Deipe_2385	PWY-6168	flavin biosynthesis III (fungi)
Deipe_2385	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Deipe_2386	PWY-6167	flavin biosynthesis II (archaea)
Deipe_2386	PWY-6168	flavin biosynthesis III (fungi)
Deipe_2386	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
Deipe_2387	PWY-6167	flavin biosynthesis II (archaea)
Deipe_2387	PWY-6168	flavin biosynthesis III (fungi)
Deipe_2410	PWY-5350	thiosulfate disproportionation III (rhodanese)
Deipe_2412	PWY-5839	menaquinol-7 biosynthesis
Deipe_2412	PWY-5844	menaquinol-9 biosynthesis
Deipe_2412	PWY-5849	menaquinol-6 biosynthesis
Deipe_2412	PWY-5890	menaquinol-10 biosynthesis
Deipe_2412	PWY-5891	menaquinol-11 biosynthesis
Deipe_2412	PWY-5892	menaquinol-12 biosynthesis
Deipe_2412	PWY-5895	menaquinol-13 biosynthesis
Deipe_2432	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Deipe_2432	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Deipe_2450	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Deipe_2451	PWY-5194	siroheme biosynthesis
Deipe_2451	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
Deipe_2454	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Deipe_2454	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
Deipe_2454	PWY-5194	siroheme biosynthesis
Deipe_2454	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
Deipe_2455	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Deipe_2455	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
Deipe_2462	PWY-43	putrescine biosynthesis II
Deipe_2463	PWY-43	putrescine biosynthesis II
Deipe_2476	PWY-5392	reductive TCA cycle II
Deipe_2476	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
Deipe_2476	PWY-5690	TCA cycle II (plants and fungi)
Deipe_2476	PWY-5913	TCA cycle VI (obligate autotrophs)
Deipe_2476	PWY-6728	methylaspartate cycle
Deipe_2476	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Deipe_2476	PWY-7254	TCA cycle VII (acetate-producers)
Deipe_2476	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Deipe_2492	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
Deipe_2492	PWY-6153	autoinducer AI-2 biosynthesis I
Deipe_2492	PWY-6154	autoinducer AI-2 biosynthesis II (<i>Vibrio</i>)
Deipe_2526	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
Deipe_2526	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
Deipe_2528	PWY-4261	glycerol degradation I
Deipe_2529	PWY-4261	glycerol degradation I
Deipe_2529	PWY-6118	glycerol-3-phosphate shuttle
Deipe_2529	PWY-6952	glycerophosphodiester degradation
Deipe_2534	PWY-4261	glycerol degradation I
Deipe_2541	PWY-5381	pyridine nucleotide cycling (plants)
Deipe_2568	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
Deipe_2568	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Deipe_2568	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
Deipe_2568	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
Deipe_2572	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Deipe_2572	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Deipe_2574	PWY-5316	nicotine biosynthesis
Deipe_2574	PWY-5381	pyridine nucleotide cycling (plants)
Deipe_2574	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
Deipe_2574	PWY-7342	superpathway of nicotine biosynthesis
Deipe_2575	PWY-5316	nicotine biosynthesis
Deipe_2575	PWY-7342	superpathway of nicotine biosynthesis
Deipe_2579	PWY-6019	pseudouridine degradation
Deipe_2599	PWY-6823	molybdenum cofactor biosynthesis
Deipe_2605	PWY-5943	&beta;-carotene biosynthesis
Deipe_2605	PWY-5947	lutein biosynthesis
Deipe_2607	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
Deipe_2607	PWY-5912	2'-deoxymugineic acid phytosiderophore biosynthesis
Deipe_2633	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
Deipe_2637	PWY-5147	oleate biosynthesis I (plants)
Deipe_2641	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
Deipe_2641	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
Deipe_2661	PWY-6906	chitin derivatives degradation
Deipe_2661	PWY-7077	<i>N</i>-acetyl-D-galactosamine degradation
Deipe_2661	PWY-7395	D-galactosamine and <i>N</i>-acetyl-D-galactosamine degradation
Deipe_2663	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Deipe_2670	PWY-7371	1,4-dihydroxy-6-naphthoate biosynthesis II
Deipe_2670	PWY-7374	1,4-dihydroxy-6-naphthoate biosynthesis I
Deipe_2671	PWY-5198	factor 420 biosynthesis
Deipe_2671	PWY-7371	1,4-dihydroxy-6-naphthoate biosynthesis II
Deipe_2671	PWY-7374	1,4-dihydroxy-6-naphthoate biosynthesis I
Deipe_2683	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Deipe_2685	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Deipe_2685	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Deipe_2688	PWY-4981	L-proline biosynthesis II (from arginine)
Deipe_2688	PWY-4984	urea cycle
Deipe_2688	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Deipe_2710	PWY-1341	phenylacetate degradation II (anaerobic)
Deipe_2710	PWY-6318	L-phenylalanine degradation IV (mammalian, via side chain)
Deipe_2713	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Deipe_2715	PWY-5506	methanol oxidation to formaldehyde IV
Deipe_2750	PWY-5874	heme degradation
Deipe_2750	PWY-5915	phycoerythrobilin biosynthesis I
Deipe_2750	PWY-5917	phycocyanobilin biosynthesis
Deipe_2750	PWY-7170	phytochromobilin biosynthesis
Deipe_2752	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Deipe_2752	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Deipe_2758	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Deipe_2758	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Deipe_2766	PWY-3081	L-lysine biosynthesis V
Deipe_2766	PWY-6871	3-methylbutanol biosynthesis
Deipe_2770	PWY-6610	adenine and adenosine salvage IV
Deipe_2774	PWY-6891	thiazole biosynthesis II (Bacillus)
Deipe_2774	PWY-6892	thiazole biosynthesis I (E. coli)
Deipe_2774	PWY-7560	methylerythritol phosphate pathway II
Deipe_2785	PWY-5737	(5<i>R</i>)-carbapenem carboxylate biosynthesis
Deipe_2785	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
Deipe_2789	PWY-6853	ethylene biosynthesis II (microbes)
Deipe_2818	PWY-842	starch degradation I
Deipe_2835	PWY-2941	L-lysine biosynthesis II
Deipe_2835	PWY-2942	L-lysine biosynthesis III
Deipe_2835	PWY-5097	L-lysine biosynthesis VI
Deipe_2845	PWY-6123	inosine-5'-phosphate biosynthesis I
Deipe_2845	PWY-6124	inosine-5'-phosphate biosynthesis II
Deipe_2845	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Deipe_2845	PWY-7234	inosine-5'-phosphate biosynthesis III
Deipe_2852	PWY-6834	spermidine biosynthesis III
Deipe_2855	PWY-3781	aerobic respiration I (cytochrome c)
Deipe_2855	PWY-4302	aerobic respiration III (alternative oxidase pathway)
Deipe_2855	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
Deipe_2855	PWY-5690	TCA cycle II (plants and fungi)
Deipe_2855	PWY-6728	methylaspartate cycle
Deipe_2855	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Deipe_2855	PWY-7254	TCA cycle VII (acetate-producers)
Deipe_2855	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Deipe_2856	PWY-3781	aerobic respiration I (cytochrome c)
Deipe_2856	PWY-4302	aerobic respiration III (alternative oxidase pathway)
Deipe_2856	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
Deipe_2856	PWY-5690	TCA cycle II (plants and fungi)
Deipe_2856	PWY-6728	methylaspartate cycle
Deipe_2856	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Deipe_2856	PWY-7254	TCA cycle VII (acetate-producers)
Deipe_2856	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Deipe_2861	PWY-6898	thiamin salvage III
Deipe_2861	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
Deipe_2861	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
Deipe_2871	PWY-2201	folate transformations I
Deipe_2871	PWY-5497	purine nucleobases degradation II (anaerobic)
Deipe_2874	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Deipe_2885	PWY-4381	fatty acid biosynthesis initiation I
Deipe_2885	PWY-5743	3-hydroxypropanoate cycle
Deipe_2885	PWY-5744	glyoxylate assimilation
Deipe_2885	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Deipe_2885	PWY-6679	jadomycin biosynthesis
Deipe_2885	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Deipe_2890	PWY-5123	<i>trans, trans</i>-farnesyl diphosphate biosynthesis
Deipe_2890	PWY-6174	mevalonate pathway II (archaea)
Deipe_2890	PWY-6383	mono-<i>trans</i>, poly-<i>cis</i> decaprenyl phosphate biosynthesis
Deipe_2890	PWY-6859	<i>all-trans</i>-farnesol biosynthesis
Deipe_2890	PWY-7102	bisabolene biosynthesis
Deipe_2890	PWY-7391	isoprene biosynthesis II (engineered)
Deipe_2890	PWY-7524	mevalonate pathway III (archaea)
Deipe_2890	PWY-7560	methylerythritol phosphate pathway II
Deipe_2890	PWY-922	mevalonate pathway I
Deipe_2893	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
Deipe_2893	PWY-6549	L-glutamine biosynthesis III
Deipe_2893	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
Deipe_2893	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
Deipe_2904	PWY-6938	NADH repair
Deipe_2910	PWY-6614	tetrahydrofolate biosynthesis
Deipe_2912	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
Deipe_2912	PWY-6148	tetrahydromethanopterin biosynthesis
Deipe_2912	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
Deipe_2912	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
Deipe_2913	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
Deipe_2913	PWY-6148	tetrahydromethanopterin biosynthesis
Deipe_2913	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
Deipe_2913	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
Deipe_2915	PWY-6823	molybdenum cofactor biosynthesis
Deipe_2915	PWY-6891	thiazole biosynthesis II (Bacillus)
Deipe_2915	PWY-6892	thiazole biosynthesis I (E. coli)
Deipe_2915	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
Deipe_2924	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Deipe_2924	PWY-5686	UMP biosynthesis
Deipe_2924	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Deipe_2925	PWY-4983	L-citrulline-nitric oxide cycle
Deipe_2925	PWY-4984	urea cycle
Deipe_2925	PWY-5	canavanine biosynthesis
Deipe_2925	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Deipe_2925	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Deipe_2928	PWY-4983	L-citrulline-nitric oxide cycle
Deipe_2928	PWY-4984	urea cycle
Deipe_2928	PWY-5	canavanine biosynthesis
Deipe_2928	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Deipe_2928	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Deipe_2931	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Deipe_2931	PWY-5686	UMP biosynthesis
Deipe_2931	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Deipe_2944	PWY-6749	CMP-legionaminate biosynthesis I
Deipe_2945	PWY-6749	CMP-legionaminate biosynthesis I
Deipe_2958	PWY-7560	methylerythritol phosphate pathway II
Deipe_2959	PWY-7560	methylerythritol phosphate pathway II
Deipe_3014	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
Deipe_3014	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
Deipe_3014	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Deipe_3014	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
Deipe_3014	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
Deipe_3014	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
Deipe_3014	PWY-7205	CMP phosphorylation
Deipe_3014	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
Deipe_3014	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Deipe_3014	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
Deipe_3014	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Deipe_3014	PWY-7224	purine deoxyribonucleosides salvage
Deipe_3014	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
Deipe_3014	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
Deipe_3024	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
Deipe_3058	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Deipe_3081	PWY-4381	fatty acid biosynthesis initiation I
Deipe_3097	PWY-40	putrescine biosynthesis I
Deipe_3097	PWY-43	putrescine biosynthesis II
Deipe_3097	PWY-6305	putrescine biosynthesis IV
Deipe_3097	PWY-6834	spermidine biosynthesis III
Deipe_3100	PWY-6012	acyl carrier protein metabolism I
Deipe_3100	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
Deipe_3102	PWY-6785	hydrogen production VIII
Deipe_3103	PWY-5484	glycolysis II (from fructose 6-phosphate)
Deipe_3130	PWY-7199	pyrimidine deoxyribonucleosides salvage
Deipe_3168	PWY-622	starch biosynthesis
Deipe_3185	PWY-723	alkylnitronates degradation
Deipe_3194	PWY-7560	methylerythritol phosphate pathway II
Deipe_3205	PWY-7183	pyrimidine nucleobases salvage I
Deipe_3206	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
Deipe_3206	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
Deipe_3206	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
Deipe_3207	PWY-7335	UDP-<i>N</i>-acetyl-&alpha;-D-mannosaminouronate biosynthesis
Deipe_3210	PWY-5530	sorbitol biosynthesis II
Deipe_3214	PWY-6728	methylaspartate cycle
Deipe_3214	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Deipe_3214	PWY-7118	chitin degradation to ethanol
Deipe_3214	PWY-7294	xylose degradation IV
Deipe_3214	PWY-7295	L-arabinose degradation IV
Deipe_3215	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Deipe_3245	PWY-5988	wound-induced proteolysis I
Deipe_3245	PWY-6018	seed germination protein turnover
Deipe_3246	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
Deipe_3255	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Deipe_3255	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
Deipe_3255	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
Deipe_3260	PWY-5958	acridone alkaloid biosynthesis
Deipe_3260	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
Deipe_3260	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
Deipe_3265	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
Deipe_3265	PWY-6153	autoinducer AI-2 biosynthesis I
Deipe_3265	PWY-6154	autoinducer AI-2 biosynthesis II (<i>Vibrio</i>)
Deipe_3266	PWY-6936	seleno-amino acid biosynthesis
Deipe_3273	PWY-6936	seleno-amino acid biosynthesis
Deipe_3280	PWY-5057	L-valine degradation II
Deipe_3280	PWY-5076	L-leucine degradation III
Deipe_3280	PWY-5078	L-isoleucine degradation II
Deipe_3280	PWY-5101	L-isoleucine biosynthesis II
Deipe_3280	PWY-5103	L-isoleucine biosynthesis III
Deipe_3280	PWY-5104	L-isoleucine biosynthesis IV
Deipe_3280	PWY-5108	L-isoleucine biosynthesis V
Deipe_3284	PWY-5198	factor 420 biosynthesis
Deipe_3321	PWY-1622	formaldehyde assimilation I (serine pathway)
Deipe_3321	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
Deipe_3321	PWY-5913	TCA cycle VI (obligate autotrophs)
Deipe_3321	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Deipe_3321	PWY-6146	<i>Methanobacterium thermoautotrophicum</i> biosynthetic metabolism
Deipe_3321	PWY-6549	L-glutamine biosynthesis III
Deipe_3321	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
Deipe_3321	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
Deipe_3321	PWY-7124	ethylene biosynthesis V (engineered)
Deipe_3323	PWY-6700	queuosine biosynthesis
Deipe_3351	PWY-6599	guanine and guanosine salvage II
Deipe_3351	PWY-6609	adenine and adenosine salvage III
Deipe_3351	PWY-6610	adenine and adenosine salvage IV
Deipe_3351	PWY-6620	guanine and guanosine salvage
Deipe_3356	PWY-7560	methylerythritol phosphate pathway II
Deipe_3362	PWY-5791	1,4-dihydroxy-2-naphthoate biosynthesis II (plants)
Deipe_3362	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
Deipe_3374	PWY-4202	arsenate detoxification I (glutaredoxin)
Deipe_3374	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
Deipe_3374	PWY-6608	guanosine nucleotides degradation III
Deipe_3374	PWY-6609	adenine and adenosine salvage III
Deipe_3374	PWY-6611	adenine and adenosine salvage V
Deipe_3374	PWY-6620	guanine and guanosine salvage
Deipe_3374	PWY-6627	salinosporamide A biosynthesis
Deipe_3374	PWY-6644	fluoroacetate and fluorothreonine biosynthesis
Deipe_3374	PWY-7179	purine deoxyribonucleosides degradation I
Deipe_3374	PWY-7179-1	purine deoxyribonucleosides degradation
Deipe_3377	PWY-5743	3-hydroxypropanoate cycle
Deipe_3377	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Deipe_3377	PWY-6728	methylaspartate cycle
Deipe_3377	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Deipe_3379	PWY-5381	pyridine nucleotide cycling (plants)
Deipe_3388	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Deipe_3388	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
Deipe_3389	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Deipe_3389	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
Deipe_3389	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
Deipe_3400	PWY-5743	3-hydroxypropanoate cycle
Deipe_3400	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Deipe_3400	PWY-6728	methylaspartate cycle
Deipe_3400	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Deipe_3404	PWY-6167	flavin biosynthesis II (archaea)
Deipe_3405	PWY-6807	xyloglucan degradation II (exoglucanase)
Deipe_3419	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
Deipe_3423	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
Deipe_3423	PWY-7177	UTP and CTP dephosphorylation II
Deipe_3423	PWY-7185	UTP and CTP dephosphorylation I
Deipe_3431	PWY-7560	methylerythritol phosphate pathway II
Deipe_3437	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Deipe_3437	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Deipe_3439	PWY-7206	pyrimidine deoxyribonucleotides dephosphorylation
Deipe_3442	PWY-1622	formaldehyde assimilation I (serine pathway)
Deipe_3442	PWY-181	photorespiration
Deipe_3442	PWY-2161	folate polyglutamylation
Deipe_3442	PWY-2201	folate transformations I
Deipe_3442	PWY-3661	glycine betaine degradation I
Deipe_3442	PWY-3661-1	glycine betaine degradation II (mammalian)
Deipe_3442	PWY-3841	folate transformations II
Deipe_3442	PWY-5497	purine nucleobases degradation II (anaerobic)
Deipe_3444	PWY-3341	L-proline biosynthesis III
Deipe_3444	PWY-4981	L-proline biosynthesis II (from arginine)
Deipe_3444	PWY-6344	L-ornithine degradation II (Stickland reaction)
Deipe_3450	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Deipe_3450	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Deipe_3462	PWY-7183	pyrimidine nucleobases salvage I
Deipe_3463	PWY-5686	UMP biosynthesis
Deipe_3464	PWY-5686	UMP biosynthesis
Deipe_3465	PWY-5686	UMP biosynthesis
Deipe_3468	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Deipe_3468	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
Deipe_3492	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
Deipe_3492	PWY-622	starch biosynthesis
Deipe_3497	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Deipe_3497	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Deipe_3503	PWY-5663	tetrahydrobiopterin biosynthesis I
Deipe_3503	PWY-5664	tetrahydrobiopterin biosynthesis II
Deipe_3503	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
Deipe_3503	PWY-6703	preQ<sub>0</sub> biosynthesis
Deipe_3503	PWY-6983	tetrahydrobiopterin biosynthesis III
Deipe_3503	PWY-7442	drosopterin and aurodrosopterin biosynthesis
Deipe_3507	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
Deipe_3508	PWY-7432	L-phenylalanine biosynthesis III (cytosolic, plants)
Deipe_3535	PWY-7456	mannan degradation
Deipe_3539	PWY-622	starch biosynthesis
Deipe_3548	PWY-5941	glycogen degradation II (eukaryotic)
Deipe_3548	PWY-6724	starch degradation II
Deipe_3548	PWY-6737	starch degradation V
Deipe_3548	PWY-7238	sucrose biosynthesis II
Deipe_3550	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
Deipe_3550	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
Deipe_3550	PWY-6268	adenosylcobalamin salvage from cobalamin
Deipe_3550	PWY-6269	adenosylcobalamin salvage from cobinamide II
Deipe_3574	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Deipe_3588	PWY-2661	trehalose biosynthesis V
Deipe_3589	PWY-2661	trehalose biosynthesis V
Deipe_3602	PWY-6562	norspermidine biosynthesis
Deipe_3603	PWY-2201	folate transformations I
Deipe_3603	PWY-3841	folate transformations II
Deipe_3604	PWY-2201	folate transformations I
Deipe_3604	PWY-3841	folate transformations II
Deipe_3606	PWY-5278	sulfite oxidation III
Deipe_3606	PWY-5340	sulfate activation for sulfonation
Deipe_3606	PWY-6683	sulfate reduction III (assimilatory)
Deipe_3606	PWY-6932	selenate reduction
Deipe_3608	PWY-5340	sulfate activation for sulfonation
Deipe_3609	PWY-6683	sulfate reduction III (assimilatory)
Deipe_3612	PWY-5028	L-histidine degradation II
Deipe_3612	PWY-5030	L-histidine degradation III
Deipe_3613	PWY-5028	L-histidine degradation II
Deipe_3613	PWY-5030	L-histidine degradation III
Deipe_3615	PWY-5028	L-histidine degradation II
Deipe_3615	PWY-5030	L-histidine degradation III
Deipe_3635	PWY-5791	1,4-dihydroxy-2-naphthoate biosynthesis II (plants)
Deipe_3635	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
Deipe_3672	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
Deipe_3672	PWY-2201	folate transformations I
Deipe_3672	PWY-3841	folate transformations II
Deipe_3672	PWY-5030	L-histidine degradation III
Deipe_3672	PWY-5497	purine nucleobases degradation II (anaerobic)
Deipe_3672	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
Deipe_3680	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Deipe_3683	PWY-6466	pyridoxal 5'-phosphate biosynthesis II
Deipe_3684	PWY-6466	pyridoxal 5'-phosphate biosynthesis II
Deipe_3691	PWY-1042	glycolysis IV (plant cytosol)
Deipe_3691	PWY-5484	glycolysis II (from fructose 6-phosphate)
Deipe_3691	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Deipe_3691	PWY-7003	glycerol degradation to butanol
Deipe_3692	PWY-1042	glycolysis IV (plant cytosol)
Deipe_3692	PWY-5484	glycolysis II (from fructose 6-phosphate)
Deipe_3692	PWY-6886	1-butanol autotrophic biosynthesis
Deipe_3692	PWY-6901	superpathway of glucose and xylose degradation
Deipe_3692	PWY-7003	glycerol degradation to butanol
Deipe_3693	PWY-1042	glycolysis IV (plant cytosol)
Deipe_3693	PWY-5484	glycolysis II (from fructose 6-phosphate)
Deipe_3693	PWY-6901	superpathway of glucose and xylose degradation
Deipe_3693	PWY-7003	glycerol degradation to butanol
Deipe_3694	PWY-2941	L-lysine biosynthesis II
Deipe_3694	PWY-2942	L-lysine biosynthesis III
Deipe_3694	PWY-5097	L-lysine biosynthesis VI
Deipe_3694	PWY-6559	spermidine biosynthesis II
Deipe_3694	PWY-6562	norspermidine biosynthesis
Deipe_3694	PWY-7153	grixazone biosynthesis
Deipe_3713	PWY-6832	2-aminoethylphosphonate degradation II
Deipe_3714	PWY-5482	pyruvate fermentation to acetate II
Deipe_3714	PWY-5485	pyruvate fermentation to acetate IV
Deipe_3714	PWY-5497	purine nucleobases degradation II (anaerobic)
Deipe_3721	PWY-842	starch degradation I
Deipe_3723	PWY-7533	gliotoxin biosynthesis
Deipe_3725	PWY-2781	<i>cis</i>-zeatin biosynthesis
Deipe_3728	PWY-6123	inosine-5'-phosphate biosynthesis I
Deipe_3728	PWY-6124	inosine-5'-phosphate biosynthesis II
Deipe_3728	PWY-7234	inosine-5'-phosphate biosynthesis III
Deipe_3729	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
Deipe_3729	PWY-2201	folate transformations I
Deipe_3729	PWY-3841	folate transformations II
Deipe_3729	PWY-5030	L-histidine degradation III
Deipe_3729	PWY-5497	purine nucleobases degradation II (anaerobic)
Deipe_3729	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
Deipe_3730	PWY-5344	L-homocysteine biosynthesis
Deipe_3731	PWY-5344	L-homocysteine biosynthesis
Deipe_3731	PWY-7174	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation II
Deipe_3736	PWY-5392	reductive TCA cycle II
Deipe_3736	PWY-5537	pyruvate fermentation to acetate V
Deipe_3736	PWY-5538	pyruvate fermentation to acetate VI
Deipe_3736	PWY-5690	TCA cycle II (plants and fungi)
Deipe_3736	PWY-5913	TCA cycle VI (obligate autotrophs)
Deipe_3736	PWY-6728	methylaspartate cycle
Deipe_3736	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Deipe_3736	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Deipe_3737	PWY-5392	reductive TCA cycle II
Deipe_3737	PWY-5537	pyruvate fermentation to acetate V
Deipe_3737	PWY-5538	pyruvate fermentation to acetate VI
Deipe_3737	PWY-5690	TCA cycle II (plants and fungi)
Deipe_3737	PWY-5913	TCA cycle VI (obligate autotrophs)
Deipe_3737	PWY-6728	methylaspartate cycle
Deipe_3737	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Deipe_3737	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Deipe_3742	PWY-2622	trehalose biosynthesis IV
Deipe_3742	PWY-842	starch degradation I
Deipe_3745	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
Deipe_3745	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
Deipe_3775	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Deipe_3787	PWY-3961	phosphopantothenate biosynthesis II
Deipe_3799	PWY-1361	benzoyl-CoA degradation I (aerobic)
Deipe_3799	PWY-5109	2-methylbutanoate biosynthesis
Deipe_3799	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
Deipe_3799	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
Deipe_3799	PWY-5177	glutaryl-CoA degradation
Deipe_3799	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Deipe_3799	PWY-6435	4-hydroxybenzoate biosynthesis V
Deipe_3799	PWY-6583	pyruvate fermentation to butanol I
Deipe_3799	PWY-6863	pyruvate fermentation to hexanol
Deipe_3799	PWY-6883	pyruvate fermentation to butanol II
Deipe_3799	PWY-6944	androstenedione degradation
Deipe_3799	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
Deipe_3799	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
Deipe_3799	PWY-7007	methyl ketone biosynthesis
Deipe_3799	PWY-7046	4-coumarate degradation (anaerobic)
Deipe_3799	PWY-7094	fatty acid salvage
Deipe_3799	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
Deipe_3799	PWY-735	jasmonic acid biosynthesis
Deipe_3799	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
Deipe_3806	PWY-5669	phosphatidylethanolamine biosynthesis I
Deipe_3817	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Deipe_3818	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Deipe_3819	PWY-6164	3-dehydroquinate biosynthesis I
Deipe_3820	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Deipe_3820	PWY-6416	quinate degradation II
Deipe_3820	PWY-6707	gallate biosynthesis