Dhaf_0007	PWY-6466	pyridoxal 5'-phosphate biosynthesis II
Dhaf_0008	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
Dhaf_0013	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
Dhaf_0013	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
Dhaf_0077	PWY-2201	folate transformations I
Dhaf_0077	PWY-3841	folate transformations II
Dhaf_0084	PWY-7052	cyanophycin metabolism
Dhaf_0085	PWY-7052	cyanophycin metabolism
Dhaf_0087	PWY-7560	methylerythritol phosphate pathway II
Dhaf_0091	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
Dhaf_0109	PWY-6823	molybdenum cofactor biosynthesis
Dhaf_0146	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
Dhaf_0146	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
Dhaf_0146	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Dhaf_0146	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
Dhaf_0146	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
Dhaf_0146	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
Dhaf_0146	PWY-7205	CMP phosphorylation
Dhaf_0146	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
Dhaf_0146	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Dhaf_0146	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
Dhaf_0146	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Dhaf_0146	PWY-7224	purine deoxyribonucleosides salvage
Dhaf_0146	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
Dhaf_0146	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
Dhaf_0149	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
Dhaf_0149	PWY-2161	folate polyglutamylation
Dhaf_0149	PWY-2201	folate transformations I
Dhaf_0149	PWY-3841	folate transformations II
Dhaf_0151	PWY-6614	tetrahydrofolate biosynthesis
Dhaf_0152	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
Dhaf_0152	PWY-6148	tetrahydromethanopterin biosynthesis
Dhaf_0152	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
Dhaf_0152	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
Dhaf_0153	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
Dhaf_0153	PWY-6148	tetrahydromethanopterin biosynthesis
Dhaf_0153	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
Dhaf_0153	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
Dhaf_0156	PWY-5155	&beta;-alanine biosynthesis III
Dhaf_0157	PWY-5316	nicotine biosynthesis
Dhaf_0157	PWY-7342	superpathway of nicotine biosynthesis
Dhaf_0158	PWY-5316	nicotine biosynthesis
Dhaf_0158	PWY-5381	pyridine nucleotide cycling (plants)
Dhaf_0158	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
Dhaf_0158	PWY-7342	superpathway of nicotine biosynthesis
Dhaf_0159	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
Dhaf_0159	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
Dhaf_0160	PWY-3961	phosphopantothenate biosynthesis II
Dhaf_0178	PWY-40	putrescine biosynthesis I
Dhaf_0178	PWY-6305	putrescine biosynthesis IV
Dhaf_0187	PWY-2941	L-lysine biosynthesis II
Dhaf_0187	PWY-2942	L-lysine biosynthesis III
Dhaf_0187	PWY-5097	L-lysine biosynthesis VI
Dhaf_0189	PWY-1281	sulfoacetaldehyde degradation I
Dhaf_0189	PWY-6637	sulfolactate degradation II
Dhaf_0191	PWY-5392	reductive TCA cycle II
Dhaf_0191	PWY-5537	pyruvate fermentation to acetate V
Dhaf_0191	PWY-5538	pyruvate fermentation to acetate VI
Dhaf_0191	PWY-5690	TCA cycle II (plants and fungi)
Dhaf_0191	PWY-5913	TCA cycle VI (obligate autotrophs)
Dhaf_0191	PWY-6728	methylaspartate cycle
Dhaf_0191	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Dhaf_0191	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Dhaf_0192	PWY-5392	reductive TCA cycle II
Dhaf_0192	PWY-5537	pyruvate fermentation to acetate V
Dhaf_0192	PWY-5538	pyruvate fermentation to acetate VI
Dhaf_0192	PWY-5690	TCA cycle II (plants and fungi)
Dhaf_0192	PWY-5913	TCA cycle VI (obligate autotrophs)
Dhaf_0192	PWY-6728	methylaspartate cycle
Dhaf_0192	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Dhaf_0192	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Dhaf_0196	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
Dhaf_0196	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
Dhaf_0252	PWY-6683	sulfate reduction III (assimilatory)
Dhaf_0253	PWY-6683	sulfate reduction III (assimilatory)
Dhaf_0267	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
Dhaf_0267	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Dhaf_0267	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
Dhaf_0267	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
Dhaf_0267	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Dhaf_0267	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Dhaf_0267	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
Dhaf_0267	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
Dhaf_0272	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
Dhaf_0272	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
Dhaf_0272	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
Dhaf_0294	PWY-6654	phosphopantothenate biosynthesis III
Dhaf_0300	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Dhaf_0300	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Dhaf_0302	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Dhaf_0302	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Dhaf_0321	PWY-5030	L-histidine degradation III
Dhaf_0321	PWY-5497	purine nucleobases degradation II (anaerobic)
Dhaf_0351	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
Dhaf_0351	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Dhaf_0351	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Dhaf_0352	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Dhaf_0352	PWY-5686	UMP biosynthesis
Dhaf_0352	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Dhaf_0355	PWY-5437	L-threonine degradation I
Dhaf_0355	PWY-7013	L-1,2-propanediol degradation
Dhaf_0379	PWY-6654	phosphopantothenate biosynthesis III
Dhaf_0394	PWY-7560	methylerythritol phosphate pathway II
Dhaf_0395	PWY-7560	methylerythritol phosphate pathway II
Dhaf_0396	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Dhaf_0397	PWY-6936	seleno-amino acid biosynthesis
Dhaf_0397	PWY-7274	D-cycloserine biosynthesis
Dhaf_0400	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
Dhaf_0443	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Dhaf_0467	PWY-6672	<i>cis</i>-genanyl-CoA degradation
Dhaf_0467	PWY-7118	chitin degradation to ethanol
Dhaf_0469	PWY-5791	1,4-dihydroxy-2-naphthoate biosynthesis II (plants)
Dhaf_0469	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
Dhaf_0469	PWY-5901	2,3-dihydroxybenzoate biosynthesis
Dhaf_0469	PWY-6406	salicylate biosynthesis I
Dhaf_0470	PWY-5791	1,4-dihydroxy-2-naphthoate biosynthesis II (plants)
Dhaf_0470	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
Dhaf_0471	PWY-5791	1,4-dihydroxy-2-naphthoate biosynthesis II (plants)
Dhaf_0471	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
Dhaf_0472	PWY-5791	1,4-dihydroxy-2-naphthoate biosynthesis II (plants)
Dhaf_0472	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
Dhaf_0473	PWY-5791	1,4-dihydroxy-2-naphthoate biosynthesis II (plants)
Dhaf_0473	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
Dhaf_0474	PWY-5791	1,4-dihydroxy-2-naphthoate biosynthesis II (plants)
Dhaf_0474	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
Dhaf_0509	PWY-5651	L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
Dhaf_0509	PWY-6309	L-tryptophan degradation XI (mammalian, via kynurenine)
Dhaf_0553	PWY-5663	tetrahydrobiopterin biosynthesis I
Dhaf_0553	PWY-5664	tetrahydrobiopterin biosynthesis II
Dhaf_0553	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
Dhaf_0553	PWY-6703	preQ<sub>0</sub> biosynthesis
Dhaf_0553	PWY-6983	tetrahydrobiopterin biosynthesis III
Dhaf_0553	PWY-7442	drosopterin and aurodrosopterin biosynthesis
Dhaf_0555	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
Dhaf_0555	PWY-2161	folate polyglutamylation
Dhaf_0555	PWY-2201	folate transformations I
Dhaf_0555	PWY-3841	folate transformations II
Dhaf_0556	PWY-5030	L-histidine degradation III
Dhaf_0556	PWY-5497	purine nucleobases degradation II (anaerobic)
Dhaf_0557	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
Dhaf_0557	PWY-2201	folate transformations I
Dhaf_0557	PWY-3841	folate transformations II
Dhaf_0557	PWY-5030	L-histidine degradation III
Dhaf_0557	PWY-5497	purine nucleobases degradation II (anaerobic)
Dhaf_0557	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
Dhaf_0701	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Dhaf_0701	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
Dhaf_0701	PWY-5194	siroheme biosynthesis
Dhaf_0701	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
Dhaf_0707	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Dhaf_0707	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Dhaf_0708	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Dhaf_0708	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Dhaf_0721	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
Dhaf_0721	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
Dhaf_0744	PWY-3781	aerobic respiration I (cytochrome c)
Dhaf_0744	PWY-4302	aerobic respiration III (alternative oxidase pathway)
Dhaf_0744	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
Dhaf_0744	PWY-5690	TCA cycle II (plants and fungi)
Dhaf_0744	PWY-6728	methylaspartate cycle
Dhaf_0744	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Dhaf_0744	PWY-7254	TCA cycle VII (acetate-producers)
Dhaf_0744	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Dhaf_0745	PWY-3781	aerobic respiration I (cytochrome c)
Dhaf_0745	PWY-4302	aerobic respiration III (alternative oxidase pathway)
Dhaf_0745	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
Dhaf_0745	PWY-5690	TCA cycle II (plants and fungi)
Dhaf_0745	PWY-6728	methylaspartate cycle
Dhaf_0745	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Dhaf_0745	PWY-7254	TCA cycle VII (acetate-producers)
Dhaf_0745	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Dhaf_0755	PWY-31	canavanine degradation
Dhaf_0755	PWY-4984	urea cycle
Dhaf_0755	PWY-6305	putrescine biosynthesis IV
Dhaf_0755	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
Dhaf_0769	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Dhaf_0769	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Dhaf_0770	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Dhaf_0771	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Dhaf_0771	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Dhaf_0794	PWY-4981	L-proline biosynthesis II (from arginine)
Dhaf_0794	PWY-4984	urea cycle
Dhaf_0794	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Dhaf_0795	PWY-4983	L-citrulline-nitric oxide cycle
Dhaf_0795	PWY-4984	urea cycle
Dhaf_0795	PWY-5	canavanine biosynthesis
Dhaf_0795	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Dhaf_0795	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Dhaf_0796	PWY-4983	L-citrulline-nitric oxide cycle
Dhaf_0796	PWY-4984	urea cycle
Dhaf_0796	PWY-5	canavanine biosynthesis
Dhaf_0796	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Dhaf_0796	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Dhaf_0797	PWY-5381	pyridine nucleotide cycling (plants)
Dhaf_0799	PWY-6123	inosine-5'-phosphate biosynthesis I
Dhaf_0799	PWY-6124	inosine-5'-phosphate biosynthesis II
Dhaf_0799	PWY-7234	inosine-5'-phosphate biosynthesis III
Dhaf_0802	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Dhaf_0802	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Dhaf_0835	PWY-6749	CMP-legionaminate biosynthesis I
Dhaf_0836	PWY-6749	CMP-legionaminate biosynthesis I
Dhaf_0868	PWY-6683	sulfate reduction III (assimilatory)
Dhaf_0882	PWY-5372	carbon tetrachloride degradation II
Dhaf_0882	PWY-6780	hydrogen production VI
Dhaf_0885	PWY-622	starch biosynthesis
Dhaf_0917	PWY-5316	nicotine biosynthesis
Dhaf_0917	PWY-7342	superpathway of nicotine biosynthesis
Dhaf_0919	PWY-1361	benzoyl-CoA degradation I (aerobic)
Dhaf_0919	PWY-5109	2-methylbutanoate biosynthesis
Dhaf_0919	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
Dhaf_0919	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
Dhaf_0919	PWY-5177	glutaryl-CoA degradation
Dhaf_0919	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Dhaf_0919	PWY-6435	4-hydroxybenzoate biosynthesis V
Dhaf_0919	PWY-6583	pyruvate fermentation to butanol I
Dhaf_0919	PWY-6863	pyruvate fermentation to hexanol
Dhaf_0919	PWY-6883	pyruvate fermentation to butanol II
Dhaf_0919	PWY-6944	androstenedione degradation
Dhaf_0919	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
Dhaf_0919	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
Dhaf_0919	PWY-7007	methyl ketone biosynthesis
Dhaf_0919	PWY-7046	4-coumarate degradation (anaerobic)
Dhaf_0919	PWY-7094	fatty acid salvage
Dhaf_0919	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
Dhaf_0919	PWY-735	jasmonic acid biosynthesis
Dhaf_0919	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
Dhaf_0922	PWY-381	nitrate reduction II (assimilatory)
Dhaf_0922	PWY-5675	nitrate reduction V (assimilatory)
Dhaf_0922	PWY-6549	L-glutamine biosynthesis III
Dhaf_0922	PWY-6963	ammonia assimilation cycle I
Dhaf_0922	PWY-6964	ammonia assimilation cycle II
Dhaf_0924	PWY-5491	diethylphosphate degradation
Dhaf_0984	PWY-6823	molybdenum cofactor biosynthesis
Dhaf_0994	PWY-381	nitrate reduction II (assimilatory)
Dhaf_0994	PWY-5675	nitrate reduction V (assimilatory)
Dhaf_0994	PWY-6549	L-glutamine biosynthesis III
Dhaf_0994	PWY-6963	ammonia assimilation cycle I
Dhaf_0994	PWY-6964	ammonia assimilation cycle II
Dhaf_1012	PWY-6871	3-methylbutanol biosynthesis
Dhaf_1029	PWY-5506	methanol oxidation to formaldehyde IV
Dhaf_1038	PWY-6823	molybdenum cofactor biosynthesis
Dhaf_1038	PWY-6891	thiazole biosynthesis II (Bacillus)
Dhaf_1038	PWY-6892	thiazole biosynthesis I (E. coli)
Dhaf_1038	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
Dhaf_1056	PWY-6823	molybdenum cofactor biosynthesis
Dhaf_1059	PWY-6871	3-methylbutanol biosynthesis
Dhaf_1077	PWY-6466	pyridoxal 5'-phosphate biosynthesis II
Dhaf_1078	PWY-6466	pyridoxal 5'-phosphate biosynthesis II
Dhaf_1110	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
Dhaf_1110	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
Dhaf_1134	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
Dhaf_1134	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
Dhaf_1138	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
Dhaf_1138	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
Dhaf_1146	PWY-5344	L-homocysteine biosynthesis
Dhaf_1146	PWY-7174	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation II
Dhaf_1149	PWY-6936	seleno-amino acid biosynthesis
Dhaf_1152	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
Dhaf_1152	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
Dhaf_1152	PWY-6164	3-dehydroquinate biosynthesis I
Dhaf_1166	PWY-5372	carbon tetrachloride degradation II
Dhaf_1166	PWY-6780	hydrogen production VI
Dhaf_1177	PWY-5697	allantoin degradation to ureidoglycolate I (urea producing)
Dhaf_1177	PWY-5698	allantoin degradation to ureidoglycolate II (ammonia producing)
Dhaf_1178	PWY-5697	allantoin degradation to ureidoglycolate I (urea producing)
Dhaf_1178	PWY-5698	allantoin degradation to ureidoglycolate II (ammonia producing)
Dhaf_1189	PWY-4621	arsenate detoxification II (glutaredoxin)
Dhaf_1201	PWY-4202	arsenate detoxification I (glutaredoxin)
Dhaf_1219	PWY-6823	molybdenum cofactor biosynthesis
Dhaf_1219	PWY-6891	thiazole biosynthesis II (Bacillus)
Dhaf_1219	PWY-6892	thiazole biosynthesis I (E. coli)
Dhaf_1219	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
Dhaf_1235	PWY-6834	spermidine biosynthesis III
Dhaf_1236	PWY-6854	ethylene biosynthesis III (microbes)
Dhaf_1244	PWY-5162	2-oxopentenoate degradation
Dhaf_1244	PWY-5436	L-threonine degradation IV
Dhaf_1244	PWY-5480	pyruvate fermentation to ethanol I
Dhaf_1244	PWY-6587	pyruvate fermentation to ethanol III
Dhaf_1244	PWY-7085	triethylamine degradation
Dhaf_1244	PWY-7180	2'-deoxy-&alpha;-D-ribose 1-phosphate degradation
Dhaf_1245	PWY-5162	2-oxopentenoate degradation
Dhaf_1246	PWY-5480	pyruvate fermentation to ethanol I
Dhaf_1246	PWY-5485	pyruvate fermentation to acetate IV
Dhaf_1246	PWY-5493	reductive monocarboxylic acid cycle
Dhaf_1262	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Dhaf_1262	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Dhaf_1295	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
Dhaf_1296	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
Dhaf_1298	PWY-5194	siroheme biosynthesis
Dhaf_1298	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
Dhaf_1299	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
Dhaf_1302	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
Dhaf_1307	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
Dhaf_1307	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
Dhaf_1307	PWY-6268	adenosylcobalamin salvage from cobalamin
Dhaf_1307	PWY-6269	adenosylcobalamin salvage from cobinamide II
Dhaf_1327	PWY-381	nitrate reduction II (assimilatory)
Dhaf_1327	PWY-5675	nitrate reduction V (assimilatory)
Dhaf_1327	PWY-6549	L-glutamine biosynthesis III
Dhaf_1327	PWY-6963	ammonia assimilation cycle I
Dhaf_1327	PWY-6964	ammonia assimilation cycle II
Dhaf_1340	PWY-6012	acyl carrier protein metabolism I
Dhaf_1340	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
Dhaf_1341	PWY-6938	NADH repair
Dhaf_1342	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
Dhaf_1360	PWY-6823	molybdenum cofactor biosynthesis
Dhaf_1399	PWY-5964	guanylyl molybdenum cofactor biosynthesis
Dhaf_1400	PWY-6823	molybdenum cofactor biosynthesis
Dhaf_1437	PWY-6599	guanine and guanosine salvage II
Dhaf_1437	PWY-6609	adenine and adenosine salvage III
Dhaf_1437	PWY-6610	adenine and adenosine salvage IV
Dhaf_1437	PWY-6620	guanine and guanosine salvage
Dhaf_1438	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
Dhaf_1467	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
Dhaf_1472	PWY-6123	inosine-5'-phosphate biosynthesis I
Dhaf_1472	PWY-7234	inosine-5'-phosphate biosynthesis III
Dhaf_1473	PWY-6123	inosine-5'-phosphate biosynthesis I
Dhaf_1473	PWY-6124	inosine-5'-phosphate biosynthesis II
Dhaf_1473	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Dhaf_1473	PWY-7234	inosine-5'-phosphate biosynthesis III
Dhaf_1474	PWY-6123	inosine-5'-phosphate biosynthesis I
Dhaf_1474	PWY-6124	inosine-5'-phosphate biosynthesis II
Dhaf_1474	PWY-7234	inosine-5'-phosphate biosynthesis III
Dhaf_1475	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Dhaf_1475	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
Dhaf_1475	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
Dhaf_1475	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
Dhaf_1476	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Dhaf_1476	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
Dhaf_1476	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
Dhaf_1477	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Dhaf_1477	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
Dhaf_1478	PWY-6123	inosine-5'-phosphate biosynthesis I
Dhaf_1478	PWY-6124	inosine-5'-phosphate biosynthesis II
Dhaf_1478	PWY-7234	inosine-5'-phosphate biosynthesis III
Dhaf_1480	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Dhaf_1480	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
Dhaf_1480	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
Dhaf_1515	PWY-1281	sulfoacetaldehyde degradation I
Dhaf_1515	PWY-5482	pyruvate fermentation to acetate II
Dhaf_1515	PWY-5485	pyruvate fermentation to acetate IV
Dhaf_1515	PWY-5497	purine nucleobases degradation II (anaerobic)
Dhaf_1515	PWY-6637	sulfolactate degradation II
Dhaf_1519	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
Dhaf_1522	PWY-3081	L-lysine biosynthesis V
Dhaf_1522	PWY-6871	3-methylbutanol biosynthesis
Dhaf_1523	PWY-5913	TCA cycle VI (obligate autotrophs)
Dhaf_1523	PWY-6549	L-glutamine biosynthesis III
Dhaf_1523	PWY-6728	methylaspartate cycle
Dhaf_1523	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Dhaf_1523	PWY-7124	ethylene biosynthesis V (engineered)
Dhaf_1523	PWY-7254	TCA cycle VII (acetate-producers)
Dhaf_1523	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
Dhaf_1537	PWY-6823	molybdenum cofactor biosynthesis
Dhaf_1541	PWY-6823	molybdenum cofactor biosynthesis
Dhaf_1545	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
Dhaf_1549	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
Dhaf_1549	PWY-6855	chitin degradation I (archaea)
Dhaf_1549	PWY-6906	chitin derivatives degradation
Dhaf_1556	PWY-6562	norspermidine biosynthesis
Dhaf_1571	PWY-7153	grixazone biosynthesis
Dhaf_1604	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
Dhaf_1604	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
Dhaf_1646	PWY-5506	methanol oxidation to formaldehyde IV
Dhaf_1661	PWY-6454	vancomycin resistance I
Dhaf_1661	PWY-6455	vancomycin resistance II
Dhaf_1662	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Dhaf_1662	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Dhaf_1664	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Dhaf_1664	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Dhaf_1712	PWY-6610	adenine and adenosine salvage IV
Dhaf_1728	PWY-5250	methanogenesis from trimethylamine
Dhaf_1730	PWY-5250	methanogenesis from trimethylamine
Dhaf_1735	PWY-2201	folate transformations I
Dhaf_1735	PWY-3841	folate transformations II
Dhaf_1798	PWY-5686	UMP biosynthesis
Dhaf_1799	PWY-1622	formaldehyde assimilation I (serine pathway)
Dhaf_1799	PWY-5392	reductive TCA cycle II
Dhaf_1799	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
Dhaf_1799	PWY-5690	TCA cycle II (plants and fungi)
Dhaf_1799	PWY-5913	TCA cycle VI (obligate autotrophs)
Dhaf_1799	PWY-6728	methylaspartate cycle
Dhaf_1799	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Dhaf_1799	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
Dhaf_1799	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
Dhaf_1828	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
Dhaf_1828	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
Dhaf_1833	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
Dhaf_1833	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
Dhaf_1836	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
Dhaf_1836	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
Dhaf_1855	PWY-6654	phosphopantothenate biosynthesis III
Dhaf_1897	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
Dhaf_1897	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
Dhaf_1930	PWY-6823	molybdenum cofactor biosynthesis
Dhaf_1970	PWY-5101	L-isoleucine biosynthesis II
Dhaf_1970	PWY-5103	L-isoleucine biosynthesis III
Dhaf_1970	PWY-5104	L-isoleucine biosynthesis IV
Dhaf_1970	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Dhaf_1978	PWY-2941	L-lysine biosynthesis II
Dhaf_1978	PWY-2942	L-lysine biosynthesis III
Dhaf_1978	PWY-5097	L-lysine biosynthesis VI
Dhaf_2029	PWY-6825	phosphatidylcholine biosynthesis V
Dhaf_2052	PWY-6167	flavin biosynthesis II (archaea)
Dhaf_2055	PWY-6871	3-methylbutanol biosynthesis
Dhaf_2065	PWY-5392	reductive TCA cycle II
Dhaf_2065	PWY-5537	pyruvate fermentation to acetate V
Dhaf_2065	PWY-5538	pyruvate fermentation to acetate VI
Dhaf_2065	PWY-5690	TCA cycle II (plants and fungi)
Dhaf_2065	PWY-5913	TCA cycle VI (obligate autotrophs)
Dhaf_2065	PWY-6728	methylaspartate cycle
Dhaf_2065	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Dhaf_2065	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Dhaf_2066	PWY-5392	reductive TCA cycle II
Dhaf_2066	PWY-5537	pyruvate fermentation to acetate V
Dhaf_2066	PWY-5538	pyruvate fermentation to acetate VI
Dhaf_2066	PWY-5690	TCA cycle II (plants and fungi)
Dhaf_2066	PWY-5913	TCA cycle VI (obligate autotrophs)
Dhaf_2066	PWY-6728	methylaspartate cycle
Dhaf_2066	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Dhaf_2066	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Dhaf_2069	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
Dhaf_2069	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
Dhaf_2072	PWY-1042	glycolysis IV (plant cytosol)
Dhaf_2072	PWY-1622	formaldehyde assimilation I (serine pathway)
Dhaf_2072	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
Dhaf_2072	PWY-5484	glycolysis II (from fructose 6-phosphate)
Dhaf_2072	PWY-5723	Rubisco shunt
Dhaf_2072	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Dhaf_2072	PWY-6886	1-butanol autotrophic biosynthesis
Dhaf_2072	PWY-6901	superpathway of glucose and xylose degradation
Dhaf_2072	PWY-7003	glycerol degradation to butanol
Dhaf_2072	PWY-7124	ethylene biosynthesis V (engineered)
Dhaf_2072	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
Dhaf_2104	PWY-7310	D-glucosaminate degradation
Dhaf_2119	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
Dhaf_2119	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
Dhaf_2125	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
Dhaf_2125	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
Dhaf_2229	PWY-5381	pyridine nucleotide cycling (plants)
Dhaf_2253	PWY-3781	aerobic respiration I (cytochrome c)
Dhaf_2253	PWY-4521	arsenite oxidation I (respiratory)
Dhaf_2253	PWY-6692	Fe(II) oxidation
Dhaf_2253	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Dhaf_2293	PWY-6502	oxidized GTP and dGTP detoxification
Dhaf_2369	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
Dhaf_2369	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
Dhaf_2406	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
Dhaf_2406	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
Dhaf_2406	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
Dhaf_2409	PWY-1281	sulfoacetaldehyde degradation I
Dhaf_2409	PWY-5482	pyruvate fermentation to acetate II
Dhaf_2409	PWY-5485	pyruvate fermentation to acetate IV
Dhaf_2409	PWY-5497	purine nucleobases degradation II (anaerobic)
Dhaf_2409	PWY-6637	sulfolactate degradation II
Dhaf_2413	PWY-4381	fatty acid biosynthesis initiation I
Dhaf_2413	PWY-5743	3-hydroxypropanoate cycle
Dhaf_2413	PWY-5744	glyoxylate assimilation
Dhaf_2413	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Dhaf_2413	PWY-6679	jadomycin biosynthesis
Dhaf_2413	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Dhaf_2414	PWY-4381	fatty acid biosynthesis initiation I
Dhaf_2414	PWY-5743	3-hydroxypropanoate cycle
Dhaf_2414	PWY-5744	glyoxylate assimilation
Dhaf_2414	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Dhaf_2414	PWY-6679	jadomycin biosynthesis
Dhaf_2414	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Dhaf_2478	PWY-702	L-methionine biosynthesis II
Dhaf_2480	PWY-5057	L-valine degradation II
Dhaf_2480	PWY-5076	L-leucine degradation III
Dhaf_2480	PWY-5078	L-isoleucine degradation II
Dhaf_2480	PWY-5101	L-isoleucine biosynthesis II
Dhaf_2480	PWY-5103	L-isoleucine biosynthesis III
Dhaf_2480	PWY-5104	L-isoleucine biosynthesis IV
Dhaf_2480	PWY-5108	L-isoleucine biosynthesis V
Dhaf_2481	PWY-5101	L-isoleucine biosynthesis II
Dhaf_2481	PWY-5103	L-isoleucine biosynthesis III
Dhaf_2481	PWY-5104	L-isoleucine biosynthesis IV
Dhaf_2481	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Dhaf_2482	PWY-5101	L-isoleucine biosynthesis II
Dhaf_2482	PWY-5103	L-isoleucine biosynthesis III
Dhaf_2482	PWY-5104	L-isoleucine biosynthesis IV
Dhaf_2482	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
Dhaf_2482	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
Dhaf_2482	PWY-6389	(<i>S</i>)-acetoin biosynthesis
Dhaf_2482	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Dhaf_2483	PWY-5101	L-isoleucine biosynthesis II
Dhaf_2483	PWY-5103	L-isoleucine biosynthesis III
Dhaf_2483	PWY-5104	L-isoleucine biosynthesis IV
Dhaf_2483	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
Dhaf_2483	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
Dhaf_2483	PWY-6389	(<i>S</i>)-acetoin biosynthesis
Dhaf_2483	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Dhaf_2484	PWY-5101	L-isoleucine biosynthesis II
Dhaf_2484	PWY-5103	L-isoleucine biosynthesis III
Dhaf_2484	PWY-5104	L-isoleucine biosynthesis IV
Dhaf_2484	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Dhaf_2487	PWY-7396	butanol and isobutanol biosynthesis (engineered)
Dhaf_2500	PWY-3341	L-proline biosynthesis III
Dhaf_2500	PWY-4981	L-proline biosynthesis II (from arginine)
Dhaf_2500	PWY-6344	L-ornithine degradation II (Stickland reaction)
Dhaf_2517	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
Dhaf_2517	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
Dhaf_2517	PWY-6164	3-dehydroquinate biosynthesis I
Dhaf_2518	PWY-6890	4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis
Dhaf_2519	PWY-6897	thiamin salvage II
Dhaf_2519	PWY-7353	4-methyl-5(&beta;-hydroxyethyl)thiazole salvage (yeast)
Dhaf_2519	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
Dhaf_2520	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
Dhaf_2520	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
Dhaf_2520	PWY-6897	thiamin salvage II
Dhaf_2520	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
Dhaf_2520	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
Dhaf_2520	PWY-7353	4-methyl-5(&beta;-hydroxyethyl)thiazole salvage (yeast)
Dhaf_2520	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
Dhaf_2522	PWY-6910	hydroxymethylpyrimidine salvage
Dhaf_2522	PWY-7356	thiamin salvage IV (yeast)
Dhaf_2522	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
Dhaf_2529	PWY-1042	glycolysis IV (plant cytosol)
Dhaf_2529	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Dhaf_2529	PWY-5484	glycolysis II (from fructose 6-phosphate)
Dhaf_2529	PWY-7385	1,3-propanediol biosynthesis (engineered)
Dhaf_2569	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
Dhaf_2569	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
Dhaf_2597	PWY-6854	ethylene biosynthesis III (microbes)
Dhaf_2633	PWY-1042	glycolysis IV (plant cytosol)
Dhaf_2633	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Dhaf_2633	PWY-5484	glycolysis II (from fructose 6-phosphate)
Dhaf_2633	PWY-6531	mannitol cycle
Dhaf_2633	PWY-7385	1,3-propanediol biosynthesis (engineered)
Dhaf_2635	PWY-1042	glycolysis IV (plant cytosol)
Dhaf_2635	PWY-5484	glycolysis II (from fructose 6-phosphate)
Dhaf_2635	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Dhaf_2635	PWY-7003	glycerol degradation to butanol
Dhaf_2637	PWY-1042	glycolysis IV (plant cytosol)
Dhaf_2637	PWY-5484	glycolysis II (from fructose 6-phosphate)
Dhaf_2637	PWY-6901	superpathway of glucose and xylose degradation
Dhaf_2637	PWY-7003	glycerol degradation to butanol
Dhaf_2640	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
Dhaf_2640	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
Dhaf_2653	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
Dhaf_2653	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
Dhaf_2660	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
Dhaf_2660	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Dhaf_2660	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
Dhaf_2660	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
Dhaf_2689	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
Dhaf_2689	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
Dhaf_2689	PWY-6268	adenosylcobalamin salvage from cobalamin
Dhaf_2689	PWY-6269	adenosylcobalamin salvage from cobinamide II
Dhaf_2691	PWY-5743	3-hydroxypropanoate cycle
Dhaf_2691	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Dhaf_2691	PWY-6728	methylaspartate cycle
Dhaf_2691	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Dhaf_2693	PWY-1361	benzoyl-CoA degradation I (aerobic)
Dhaf_2693	PWY-5109	2-methylbutanoate biosynthesis
Dhaf_2693	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
Dhaf_2693	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
Dhaf_2693	PWY-5177	glutaryl-CoA degradation
Dhaf_2693	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Dhaf_2693	PWY-6435	4-hydroxybenzoate biosynthesis V
Dhaf_2693	PWY-6583	pyruvate fermentation to butanol I
Dhaf_2693	PWY-6863	pyruvate fermentation to hexanol
Dhaf_2693	PWY-6883	pyruvate fermentation to butanol II
Dhaf_2693	PWY-6944	androstenedione degradation
Dhaf_2693	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
Dhaf_2693	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
Dhaf_2693	PWY-7007	methyl ketone biosynthesis
Dhaf_2693	PWY-7046	4-coumarate degradation (anaerobic)
Dhaf_2693	PWY-7094	fatty acid salvage
Dhaf_2693	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
Dhaf_2693	PWY-735	jasmonic acid biosynthesis
Dhaf_2693	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
Dhaf_2721	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Dhaf_2721	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Dhaf_2730	PWY-2781	<i>cis</i>-zeatin biosynthesis
Dhaf_2755	PWY-1042	glycolysis IV (plant cytosol)
Dhaf_2755	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
Dhaf_2755	PWY-5484	glycolysis II (from fructose 6-phosphate)
Dhaf_2755	PWY-5723	Rubisco shunt
Dhaf_2755	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Dhaf_2755	PWY-6886	1-butanol autotrophic biosynthesis
Dhaf_2755	PWY-6901	superpathway of glucose and xylose degradation
Dhaf_2755	PWY-7003	glycerol degradation to butanol
Dhaf_2755	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
Dhaf_2755	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
Dhaf_2756	PWY-1042	glycolysis IV (plant cytosol)
Dhaf_2756	PWY-5484	glycolysis II (from fructose 6-phosphate)
Dhaf_2756	PWY-6901	superpathway of glucose and xylose degradation
Dhaf_2756	PWY-7003	glycerol degradation to butanol
Dhaf_2763	PWY-6683	sulfate reduction III (assimilatory)
Dhaf_2781	PWY-1042	glycolysis IV (plant cytosol)
Dhaf_2781	PWY-5484	glycolysis II (from fructose 6-phosphate)
Dhaf_2781	PWY-6901	superpathway of glucose and xylose degradation
Dhaf_2781	PWY-7003	glycerol degradation to butanol
Dhaf_2798	PWY-5372	carbon tetrachloride degradation II
Dhaf_2798	PWY-6780	hydrogen production VI
Dhaf_2809	PWY-6167	flavin biosynthesis II (archaea)
Dhaf_2809	PWY-6168	flavin biosynthesis III (fungi)
Dhaf_2809	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Dhaf_2810	PWY-6167	flavin biosynthesis II (archaea)
Dhaf_2810	PWY-6168	flavin biosynthesis III (fungi)
Dhaf_2810	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
Dhaf_2811	PWY-6167	flavin biosynthesis II (archaea)
Dhaf_2811	PWY-6168	flavin biosynthesis III (fungi)
Dhaf_2815	PWY-6749	CMP-legionaminate biosynthesis I
Dhaf_2864	PWY-1361	benzoyl-CoA degradation I (aerobic)
Dhaf_2864	PWY-5109	2-methylbutanoate biosynthesis
Dhaf_2864	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
Dhaf_2864	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
Dhaf_2864	PWY-5177	glutaryl-CoA degradation
Dhaf_2864	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Dhaf_2864	PWY-6435	4-hydroxybenzoate biosynthesis V
Dhaf_2864	PWY-6583	pyruvate fermentation to butanol I
Dhaf_2864	PWY-6863	pyruvate fermentation to hexanol
Dhaf_2864	PWY-6883	pyruvate fermentation to butanol II
Dhaf_2864	PWY-6944	androstenedione degradation
Dhaf_2864	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
Dhaf_2864	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
Dhaf_2864	PWY-7007	methyl ketone biosynthesis
Dhaf_2864	PWY-7046	4-coumarate degradation (anaerobic)
Dhaf_2864	PWY-7094	fatty acid salvage
Dhaf_2864	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
Dhaf_2864	PWY-735	jasmonic acid biosynthesis
Dhaf_2864	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
Dhaf_2894	PWY-6984	lipoate salvage II
Dhaf_2894	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
Dhaf_2894	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
Dhaf_2899	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
Dhaf_2932	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
Dhaf_2932	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
Dhaf_2978	PWY-5381	pyridine nucleotide cycling (plants)
Dhaf_2978	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
Dhaf_2978	PWY-6596	adenosine nucleotides degradation I
Dhaf_2978	PWY-6606	guanosine nucleotides degradation II
Dhaf_2978	PWY-6607	guanosine nucleotides degradation I
Dhaf_2978	PWY-6608	guanosine nucleotides degradation III
Dhaf_2978	PWY-7185	UTP and CTP dephosphorylation I
Dhaf_2980	PWY-5663	tetrahydrobiopterin biosynthesis I
Dhaf_2980	PWY-5664	tetrahydrobiopterin biosynthesis II
Dhaf_2980	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
Dhaf_2980	PWY-6703	preQ<sub>0</sub> biosynthesis
Dhaf_2980	PWY-6983	tetrahydrobiopterin biosynthesis III
Dhaf_2980	PWY-7442	drosopterin and aurodrosopterin biosynthesis
Dhaf_2995	PWY-1042	glycolysis IV (plant cytosol)
Dhaf_2995	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Dhaf_2995	PWY-5484	glycolysis II (from fructose 6-phosphate)
Dhaf_2995	PWY-7385	1,3-propanediol biosynthesis (engineered)
Dhaf_3008	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
Dhaf_3008	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
Dhaf_3008	PWY-6268	adenosylcobalamin salvage from cobalamin
Dhaf_3008	PWY-6269	adenosylcobalamin salvage from cobinamide II
Dhaf_3015	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
Dhaf_3015	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Dhaf_3015	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
Dhaf_3015	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
Dhaf_3015	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
Dhaf_3015	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
Dhaf_3024	PWY-6683	sulfate reduction III (assimilatory)
Dhaf_3028	PWY-5669	phosphatidylethanolamine biosynthesis I
Dhaf_3048	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
Dhaf_3051	PWY-7432	L-phenylalanine biosynthesis III (cytosolic, plants)
Dhaf_3054	PWY-7193	pyrimidine ribonucleosides salvage I
Dhaf_3067	PWY-5839	menaquinol-7 biosynthesis
Dhaf_3067	PWY-5844	menaquinol-9 biosynthesis
Dhaf_3067	PWY-5849	menaquinol-6 biosynthesis
Dhaf_3067	PWY-5890	menaquinol-10 biosynthesis
Dhaf_3067	PWY-5891	menaquinol-11 biosynthesis
Dhaf_3067	PWY-5892	menaquinol-12 biosynthesis
Dhaf_3067	PWY-5895	menaquinol-13 biosynthesis
Dhaf_3087	PWY-5392	reductive TCA cycle II
Dhaf_3087	PWY-5537	pyruvate fermentation to acetate V
Dhaf_3087	PWY-5538	pyruvate fermentation to acetate VI
Dhaf_3087	PWY-5690	TCA cycle II (plants and fungi)
Dhaf_3087	PWY-5913	TCA cycle VI (obligate autotrophs)
Dhaf_3087	PWY-6728	methylaspartate cycle
Dhaf_3087	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Dhaf_3087	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Dhaf_3089	PWY-5392	reductive TCA cycle II
Dhaf_3089	PWY-5537	pyruvate fermentation to acetate V
Dhaf_3089	PWY-5538	pyruvate fermentation to acetate VI
Dhaf_3089	PWY-5690	TCA cycle II (plants and fungi)
Dhaf_3089	PWY-5913	TCA cycle VI (obligate autotrophs)
Dhaf_3089	PWY-6728	methylaspartate cycle
Dhaf_3089	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Dhaf_3089	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Dhaf_3094	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Dhaf_3100	PWY-7533	gliotoxin biosynthesis
Dhaf_3123	PWY-5269	cardiolipin biosynthesis II
Dhaf_3123	PWY-5668	cardiolipin biosynthesis I
Dhaf_3137	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
Dhaf_3137	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
Dhaf_3137	PWY-6269	adenosylcobalamin salvage from cobinamide II
Dhaf_3141	PWY-6823	molybdenum cofactor biosynthesis
Dhaf_3165	PWY-6654	phosphopantothenate biosynthesis III
Dhaf_3171	PWY-2723	trehalose degradation V
Dhaf_3171	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
Dhaf_3171	PWY-5661	GDP-glucose biosynthesis
Dhaf_3171	PWY-7238	sucrose biosynthesis II
Dhaf_3171	PWY-7385	1,3-propanediol biosynthesis (engineered)
Dhaf_3178	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
Dhaf_3178	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
Dhaf_3178	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
Dhaf_3178	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
Dhaf_3194	PWY-3801	sucrose degradation II (sucrose synthase)
Dhaf_3194	PWY-5054	sorbitol biosynthesis I
Dhaf_3194	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
Dhaf_3194	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
Dhaf_3194	PWY-5659	GDP-mannose biosynthesis
Dhaf_3194	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Dhaf_3194	PWY-621	sucrose degradation III (sucrose invertase)
Dhaf_3194	PWY-622	starch biosynthesis
Dhaf_3194	PWY-6531	mannitol cycle
Dhaf_3194	PWY-6981	chitin biosynthesis
Dhaf_3194	PWY-7238	sucrose biosynthesis II
Dhaf_3194	PWY-7347	sucrose biosynthesis III
Dhaf_3194	PWY-7385	1,3-propanediol biosynthesis (engineered)
Dhaf_3195	PWY-5941	glycogen degradation II (eukaryotic)
Dhaf_3195	PWY-6724	starch degradation II
Dhaf_3195	PWY-6737	starch degradation V
Dhaf_3195	PWY-7238	sucrose biosynthesis II
Dhaf_3196	PWY-622	starch biosynthesis
Dhaf_3198	PWY-622	starch biosynthesis
Dhaf_3199	PWY-5941	glycogen degradation II (eukaryotic)
Dhaf_3199	PWY-622	starch biosynthesis
Dhaf_3199	PWY-6731	starch degradation III
Dhaf_3199	PWY-6737	starch degradation V
Dhaf_3199	PWY-7238	sucrose biosynthesis II
Dhaf_3200	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
Dhaf_3200	PWY-622	starch biosynthesis
Dhaf_3202	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Dhaf_3202	PWY-5686	UMP biosynthesis
Dhaf_3202	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Dhaf_3203	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Dhaf_3203	PWY-5686	UMP biosynthesis
Dhaf_3203	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Dhaf_3214	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
Dhaf_3214	PWY-6596	adenosine nucleotides degradation I
Dhaf_3214	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
Dhaf_3217	PWY-6703	preQ<sub>0</sub> biosynthesis
Dhaf_3227	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
Dhaf_3227	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Dhaf_3227	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
Dhaf_3227	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
Dhaf_3227	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Dhaf_3227	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Dhaf_3227	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
Dhaf_3227	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
Dhaf_3228	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Dhaf_3228	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Dhaf_3285	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
Dhaf_3285	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
Dhaf_3285	PWY-6269	adenosylcobalamin salvage from cobinamide II
Dhaf_3286	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
Dhaf_3286	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
Dhaf_3286	PWY-6269	adenosylcobalamin salvage from cobinamide II
Dhaf_3287	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
Dhaf_3287	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
Dhaf_3287	PWY-6269	adenosylcobalamin salvage from cobinamide II
Dhaf_3348	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Dhaf_3351	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Dhaf_3351	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
Dhaf_3353	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Dhaf_3353	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
Dhaf_3353	PWY-5194	siroheme biosynthesis
Dhaf_3353	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
Dhaf_3354	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Dhaf_3354	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
Dhaf_3355	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Dhaf_3356	PWY-5194	siroheme biosynthesis
Dhaf_3356	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
Dhaf_3365	PWY-6834	spermidine biosynthesis III
Dhaf_3379	PWY-5667	CDP-diacylglycerol biosynthesis I
Dhaf_3379	PWY-5981	CDP-diacylglycerol biosynthesis III
Dhaf_3385	PWY-7560	methylerythritol phosphate pathway II
Dhaf_3387	PWY-7205	CMP phosphorylation
Dhaf_3392	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Dhaf_3394	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
Dhaf_3394	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
Dhaf_3394	PWY-6164	3-dehydroquinate biosynthesis I
Dhaf_3395	PWY-3461	L-tyrosine biosynthesis II
Dhaf_3395	PWY-3462	L-phenylalanine biosynthesis II
Dhaf_3395	PWY-6120	L-tyrosine biosynthesis III
Dhaf_3395	PWY-6627	salinosporamide A biosynthesis
Dhaf_3443	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
Dhaf_3443	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
Dhaf_3447	PWY-7181	pyrimidine deoxyribonucleosides degradation
Dhaf_3448	PWY-4202	arsenate detoxification I (glutaredoxin)
Dhaf_3448	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
Dhaf_3448	PWY-6608	guanosine nucleotides degradation III
Dhaf_3448	PWY-6609	adenine and adenosine salvage III
Dhaf_3448	PWY-6611	adenine and adenosine salvage V
Dhaf_3448	PWY-6620	guanine and guanosine salvage
Dhaf_3448	PWY-6627	salinosporamide A biosynthesis
Dhaf_3448	PWY-6644	fluoroacetate and fluorothreonine biosynthesis
Dhaf_3448	PWY-7179	purine deoxyribonucleosides degradation I
Dhaf_3448	PWY-7179-1	purine deoxyribonucleosides degradation
Dhaf_3449	PWY-7180	2'-deoxy-&alpha;-D-ribose 1-phosphate degradation
Dhaf_3486	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
Dhaf_3486	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
Dhaf_3486	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
Dhaf_3488	PWY-6891	thiazole biosynthesis II (Bacillus)
Dhaf_3488	PWY-6892	thiazole biosynthesis I (E. coli)
Dhaf_3488	PWY-7560	methylerythritol phosphate pathway II
Dhaf_3495	PWY-5030	L-histidine degradation III
Dhaf_3495	PWY-5497	purine nucleobases degradation II (anaerobic)
Dhaf_3496	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
Dhaf_3496	PWY-2201	folate transformations I
Dhaf_3496	PWY-3841	folate transformations II
Dhaf_3496	PWY-5030	L-histidine degradation III
Dhaf_3496	PWY-5497	purine nucleobases degradation II (anaerobic)
Dhaf_3496	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
Dhaf_3501	PWY-101	photosynthesis light reactions
Dhaf_3501	PWY-7230	ubiquinol-6 biosynthesis from 4-aminobenzoate (eukaryotic)
Dhaf_3520	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Dhaf_3520	PWY-6416	quinate degradation II
Dhaf_3520	PWY-6707	gallate biosynthesis
Dhaf_3533	PWY-6164	3-dehydroquinate biosynthesis I
Dhaf_3534	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Dhaf_3535	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Dhaf_3537	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Dhaf_3538	PWY-5269	cardiolipin biosynthesis II
Dhaf_3538	PWY-5668	cardiolipin biosynthesis I
Dhaf_3539	PWY-5669	phosphatidylethanolamine biosynthesis I
Dhaf_3543	PWY-1281	sulfoacetaldehyde degradation I
Dhaf_3543	PWY-5482	pyruvate fermentation to acetate II
Dhaf_3543	PWY-5485	pyruvate fermentation to acetate IV
Dhaf_3543	PWY-5497	purine nucleobases degradation II (anaerobic)
Dhaf_3543	PWY-6637	sulfolactate degradation II
Dhaf_3544	PWY-5482	pyruvate fermentation to acetate II
Dhaf_3544	PWY-5485	pyruvate fermentation to acetate IV
Dhaf_3544	PWY-5497	purine nucleobases degradation II (anaerobic)
Dhaf_3581	PWY-6823	molybdenum cofactor biosynthesis
Dhaf_3581	PWY-6891	thiazole biosynthesis II (Bacillus)
Dhaf_3581	PWY-6892	thiazole biosynthesis I (E. coli)
Dhaf_3581	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
Dhaf_3605	PWY-7346	UDP-&alpha;-D-glucuronate biosynthesis (from UDP-glucose)
Dhaf_3610	PWY-6605	adenine and adenosine salvage II
Dhaf_3610	PWY-6610	adenine and adenosine salvage IV
Dhaf_3616	PWY-5101	L-isoleucine biosynthesis II
Dhaf_3616	PWY-5103	L-isoleucine biosynthesis III
Dhaf_3616	PWY-5104	L-isoleucine biosynthesis IV
Dhaf_3616	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
Dhaf_3616	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
Dhaf_3616	PWY-6389	(<i>S</i>)-acetoin biosynthesis
Dhaf_3616	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Dhaf_3617	PWY-5101	L-isoleucine biosynthesis II
Dhaf_3617	PWY-5103	L-isoleucine biosynthesis III
Dhaf_3617	PWY-5104	L-isoleucine biosynthesis IV
Dhaf_3617	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
Dhaf_3617	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
Dhaf_3617	PWY-6389	(<i>S</i>)-acetoin biosynthesis
Dhaf_3617	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Dhaf_3622	PWY-6700	queuosine biosynthesis
Dhaf_3623	PWY-6700	queuosine biosynthesis
Dhaf_3631	PWY-5674	nitrate reduction IV (dissimilatory)
Dhaf_3639	PWY-5674	nitrate reduction IV (dissimilatory)
Dhaf_3651	PWY-1361	benzoyl-CoA degradation I (aerobic)
Dhaf_3651	PWY-5109	2-methylbutanoate biosynthesis
Dhaf_3651	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
Dhaf_3651	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
Dhaf_3651	PWY-5177	glutaryl-CoA degradation
Dhaf_3651	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Dhaf_3651	PWY-6435	4-hydroxybenzoate biosynthesis V
Dhaf_3651	PWY-6583	pyruvate fermentation to butanol I
Dhaf_3651	PWY-6863	pyruvate fermentation to hexanol
Dhaf_3651	PWY-6883	pyruvate fermentation to butanol II
Dhaf_3651	PWY-6944	androstenedione degradation
Dhaf_3651	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
Dhaf_3651	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
Dhaf_3651	PWY-7007	methyl ketone biosynthesis
Dhaf_3651	PWY-7046	4-coumarate degradation (anaerobic)
Dhaf_3651	PWY-7094	fatty acid salvage
Dhaf_3651	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
Dhaf_3651	PWY-735	jasmonic acid biosynthesis
Dhaf_3651	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
Dhaf_3658	PWY-2941	L-lysine biosynthesis II
Dhaf_3658	PWY-2942	L-lysine biosynthesis III
Dhaf_3658	PWY-5097	L-lysine biosynthesis VI
Dhaf_3659	PWY-2941	L-lysine biosynthesis II
Dhaf_3659	PWY-2942	L-lysine biosynthesis III
Dhaf_3659	PWY-5097	L-lysine biosynthesis VI
Dhaf_3659	PWY-6559	spermidine biosynthesis II
Dhaf_3659	PWY-6562	norspermidine biosynthesis
Dhaf_3659	PWY-7153	grixazone biosynthesis
Dhaf_3660	PWY-2941	L-lysine biosynthesis II
Dhaf_3660	PWY-2942	L-lysine biosynthesis III
Dhaf_3660	PWY-5097	L-lysine biosynthesis VI
Dhaf_3660	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Dhaf_3660	PWY-6559	spermidine biosynthesis II
Dhaf_3660	PWY-6562	norspermidine biosynthesis
Dhaf_3660	PWY-7153	grixazone biosynthesis
Dhaf_3660	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Dhaf_3663	PWY-2941	L-lysine biosynthesis II
Dhaf_3663	PWY-2942	L-lysine biosynthesis III
Dhaf_3663	PWY-5097	L-lysine biosynthesis VI
Dhaf_3666	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
Dhaf_3666	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Dhaf_3666	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
Dhaf_3666	PWY-7206	pyrimidine deoxyribonucleotides dephosphorylation
Dhaf_3668	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
Dhaf_3668	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
Dhaf_3672	PWY-5523	5,6-dimethylbenzimidazole biosynthesis
Dhaf_3672	PWY-6167	flavin biosynthesis II (archaea)
Dhaf_3672	PWY-6168	flavin biosynthesis III (fungi)
Dhaf_3700	PWY-7560	methylerythritol phosphate pathway II
Dhaf_3702	PWY-7560	methylerythritol phosphate pathway II
Dhaf_3757	PWY-6829	tRNA methylation (yeast)
Dhaf_3757	PWY-7285	methylwyosine biosynthesis
Dhaf_3757	PWY-7286	7-(3-amino-3-carboxypropyl)-wyosine biosynthesis
Dhaf_3765	PWY-4361	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation
Dhaf_3765	PWY-7174	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation II
Dhaf_3778	PWY-5269	cardiolipin biosynthesis II
Dhaf_3778	PWY-5668	cardiolipin biosynthesis I
Dhaf_3792	PWY-5372	carbon tetrachloride degradation II
Dhaf_3792	PWY-6780	hydrogen production VI
Dhaf_3800	PWY-2201	folate transformations I
Dhaf_3800	PWY-3841	folate transformations II
Dhaf_3815	PWY-723	alkylnitronates degradation
Dhaf_3817	PWY-5367	petroselinate biosynthesis
Dhaf_3817	PWY-5971	palmitate biosynthesis II (bacteria and plants)
Dhaf_3817	PWY-5973	<i>cis</i>-vaccenate biosynthesis
Dhaf_3817	PWY-5989	stearate biosynthesis II (bacteria and plants)
Dhaf_3817	PWY-5994	palmitate biosynthesis I (animals and fungi)
Dhaf_3817	PWY-6113	superpathway of mycolate biosynthesis
Dhaf_3817	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
Dhaf_3817	PWY-6519	8-amino-7-oxononanoate biosynthesis I
Dhaf_3817	PWY-6951	Dhaf_3817
Dhaf_3817	PWY-7053	docosahexaenoate biosynthesis I (lower eukaryotes)
Dhaf_3817	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Dhaf_3817	PWYG-321	mycolate biosynthesis
Dhaf_3818	PWY-4381	fatty acid biosynthesis initiation I
Dhaf_3818	PWY-6799	fatty acid biosynthesis (plant mitochondria)
Dhaf_3818	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Dhaf_3819	PWY-723	alkylnitronates degradation
Dhaf_3820	PWY-4381	fatty acid biosynthesis initiation I
Dhaf_3826	PWY-5482	pyruvate fermentation to acetate II
Dhaf_3826	PWY-5485	pyruvate fermentation to acetate IV
Dhaf_3826	PWY-5497	purine nucleobases degradation II (anaerobic)
Dhaf_3841	PWY-6898	thiamin salvage III
Dhaf_3841	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
Dhaf_3841	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
Dhaf_3842	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Dhaf_3842	PWY-5723	Rubisco shunt
Dhaf_3866	PWY-5350	thiosulfate disproportionation III (rhodanese)
Dhaf_3867	PWY-4041	&gamma;-glutamyl cycle
Dhaf_3867	PWY-5826	hypoglycin biosynthesis
Dhaf_3878	PWY-2201	folate transformations I
Dhaf_3878	PWY-3841	folate transformations II
Dhaf_3885	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
Dhaf_3885	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
Dhaf_3891	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
Dhaf_3891	PWY-5912	2'-deoxymugineic acid phytosiderophore biosynthesis
Dhaf_3894	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
Dhaf_3907	PWY-2941	L-lysine biosynthesis II
Dhaf_3907	PWY-5097	L-lysine biosynthesis VI
Dhaf_3962	PWY-3461	L-tyrosine biosynthesis II
Dhaf_3962	PWY-3462	L-phenylalanine biosynthesis II
Dhaf_3962	PWY-5791	1,4-dihydroxy-2-naphthoate biosynthesis II (plants)
Dhaf_3962	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
Dhaf_3962	PWY-5901	2,3-dihydroxybenzoate biosynthesis
Dhaf_3962	PWY-5958	acridone alkaloid biosynthesis
Dhaf_3962	PWY-6120	L-tyrosine biosynthesis III
Dhaf_3962	PWY-6406	salicylate biosynthesis I
Dhaf_3962	PWY-6627	salinosporamide A biosynthesis
Dhaf_3962	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
Dhaf_3962	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
Dhaf_3968	PWY-6012	acyl carrier protein metabolism I
Dhaf_3968	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
Dhaf_3999	PWY-1361	benzoyl-CoA degradation I (aerobic)
Dhaf_3999	PWY-5109	2-methylbutanoate biosynthesis
Dhaf_3999	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
Dhaf_3999	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
Dhaf_3999	PWY-5177	glutaryl-CoA degradation
Dhaf_3999	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Dhaf_3999	PWY-6435	4-hydroxybenzoate biosynthesis V
Dhaf_3999	PWY-6583	pyruvate fermentation to butanol I
Dhaf_3999	PWY-6863	pyruvate fermentation to hexanol
Dhaf_3999	PWY-6883	pyruvate fermentation to butanol II
Dhaf_3999	PWY-6944	androstenedione degradation
Dhaf_3999	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
Dhaf_3999	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
Dhaf_3999	PWY-7007	methyl ketone biosynthesis
Dhaf_3999	PWY-7046	4-coumarate degradation (anaerobic)
Dhaf_3999	PWY-7094	fatty acid salvage
Dhaf_3999	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
Dhaf_3999	PWY-735	jasmonic acid biosynthesis
Dhaf_3999	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
Dhaf_4012	PWY-5686	UMP biosynthesis
Dhaf_4013	PWY-5686	UMP biosynthesis
Dhaf_4016	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Dhaf_4016	PWY-5686	UMP biosynthesis
Dhaf_4016	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Dhaf_4017	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Dhaf_4017	PWY-5686	UMP biosynthesis
Dhaf_4017	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Dhaf_4018	PWY-5686	UMP biosynthesis
Dhaf_4019	PWY-5686	UMP biosynthesis
Dhaf_4020	PWY-7183	pyrimidine nucleobases salvage I
Dhaf_4028	PWY-5839	menaquinol-7 biosynthesis
Dhaf_4028	PWY-5851	demethylmenaquinol-9 biosynthesis
Dhaf_4028	PWY-5852	demethylmenaquinol-8 biosynthesis I
Dhaf_4028	PWY-5853	demethylmenaquinol-6 biosynthesis I
Dhaf_4028	PWY-5890	menaquinol-10 biosynthesis
Dhaf_4028	PWY-5891	menaquinol-11 biosynthesis
Dhaf_4028	PWY-5892	menaquinol-12 biosynthesis
Dhaf_4028	PWY-5895	menaquinol-13 biosynthesis
Dhaf_4034	PWY-5437	L-threonine degradation I
Dhaf_4034	PWY-7013	L-1,2-propanediol degradation
Dhaf_4047	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
Dhaf_4060	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Dhaf_4060	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Dhaf_4061	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Dhaf_4061	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Dhaf_4063	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
Dhaf_4063	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
Dhaf_4063	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
Dhaf_4063	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
Dhaf_4065	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Dhaf_4065	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Dhaf_4066	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
Dhaf_4066	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
Dhaf_4066	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
Dhaf_4067	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Dhaf_4067	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Dhaf_4074	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
Dhaf_4074	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
Dhaf_4098	PWY-6823	molybdenum cofactor biosynthesis
Dhaf_4107	PWY-6683	sulfate reduction III (assimilatory)
Dhaf_4111	PWY-5278	sulfite oxidation III
Dhaf_4111	PWY-5340	sulfate activation for sulfonation
Dhaf_4111	PWY-6683	sulfate reduction III (assimilatory)
Dhaf_4111	PWY-6932	selenate reduction
Dhaf_4147	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Dhaf_4182	PWY-6823	molybdenum cofactor biosynthesis
Dhaf_4187	PWY-5833	CDP-4-dehydro-3,6-dideoxy-D-glucose biosynthesis
Dhaf_4187	PWY-5940	streptomycin biosynthesis
Dhaf_4206	PWY-6038	citrate degradation
Dhaf_4214	PWY-5663	tetrahydrobiopterin biosynthesis I
Dhaf_4214	PWY-5664	tetrahydrobiopterin biosynthesis II
Dhaf_4214	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
Dhaf_4214	PWY-6703	preQ<sub>0</sub> biosynthesis
Dhaf_4214	PWY-6983	tetrahydrobiopterin biosynthesis III
Dhaf_4214	PWY-7442	drosopterin and aurodrosopterin biosynthesis
Dhaf_4223	PWY-6936	seleno-amino acid biosynthesis
Dhaf_4234	PWY-5674	nitrate reduction IV (dissimilatory)
Dhaf_4251	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
Dhaf_4251	PWY-6549	L-glutamine biosynthesis III
Dhaf_4251	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
Dhaf_4251	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
Dhaf_4258	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
Dhaf_4258	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Dhaf_4258	PWY-7185	UTP and CTP dephosphorylation I
Dhaf_4258	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
Dhaf_4258	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
Dhaf_4274	PWY-7180	2'-deoxy-&alpha;-D-ribose 1-phosphate degradation
Dhaf_4276	PWY-6556	pyrimidine ribonucleosides salvage II
Dhaf_4276	PWY-7181	pyrimidine deoxyribonucleosides degradation
Dhaf_4276	PWY-7193	pyrimidine ribonucleosides salvage I
Dhaf_4276	PWY-7199	pyrimidine deoxyribonucleosides salvage
Dhaf_4277	PWY-7039	phosphatidate metabolism, as a signaling molecule
Dhaf_4326	PWY-5250	methanogenesis from trimethylamine
Dhaf_4332	PWY-5381	pyridine nucleotide cycling (plants)
Dhaf_4332	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
Dhaf_4355	PWY-5392	reductive TCA cycle II
Dhaf_4355	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
Dhaf_4355	PWY-5690	TCA cycle II (plants and fungi)
Dhaf_4355	PWY-5913	TCA cycle VI (obligate autotrophs)
Dhaf_4355	PWY-6728	methylaspartate cycle
Dhaf_4355	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Dhaf_4355	PWY-7254	TCA cycle VII (acetate-producers)
Dhaf_4355	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Dhaf_4360	PWY-2161	folate polyglutamylation
Dhaf_4375	PWY-5958	acridone alkaloid biosynthesis
Dhaf_4375	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
Dhaf_4375	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
Dhaf_4376	PWY-5958	acridone alkaloid biosynthesis
Dhaf_4376	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
Dhaf_4376	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
Dhaf_4379	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
Dhaf_4379	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
Dhaf_4379	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
Dhaf_4379	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
Dhaf_4382	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Dhaf_4382	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Dhaf_4383	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Dhaf_4383	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Dhaf_4388	PWY-7206	pyrimidine deoxyribonucleotides dephosphorylation
Dhaf_4400	PWY-5087	L-glutamate degradation VI (to pyruvate)
Dhaf_4400	PWY-6728	methylaspartate cycle
Dhaf_4401	PWY-5087	L-glutamate degradation VI (to pyruvate)
Dhaf_4401	PWY-5103	L-isoleucine biosynthesis III
Dhaf_4401	PWY-6728	methylaspartate cycle
Dhaf_4403	PWY-5087	L-glutamate degradation VI (to pyruvate)
Dhaf_4403	PWY-5103	L-isoleucine biosynthesis III
Dhaf_4403	PWY-6728	methylaspartate cycle
Dhaf_4404	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Dhaf_4404	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Dhaf_4443	PWY-5958	acridone alkaloid biosynthesis
Dhaf_4443	PWY-6543	4-aminobenzoate biosynthesis
Dhaf_4443	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
Dhaf_4443	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
Dhaf_4443	PWY-6722	candicidin biosynthesis
Dhaf_4455	PWY-3821	galactose degradation III
Dhaf_4455	PWY-6317	galactose degradation I (Leloir pathway)
Dhaf_4455	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
Dhaf_4455	PWY-6527	stachyose degradation
Dhaf_4455	PWY-7328	superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
Dhaf_4455	PWY-7344	UDP-D-galactose biosynthesis
Dhaf_4468	PWY-3221	dTDP-L-rhamnose biosynthesis II
Dhaf_4468	PWY-6808	dTDP-D-forosamine biosynthesis
Dhaf_4468	PWY-6942	dTDP-D-desosamine biosynthesis
Dhaf_4468	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
Dhaf_4468	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
Dhaf_4468	PWY-6974	dTDP-L-olivose biosynthesis
Dhaf_4468	PWY-6976	dTDP-L-mycarose biosynthesis
Dhaf_4468	PWY-7104	dTDP-L-megosamine biosynthesis
Dhaf_4468	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
Dhaf_4468	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
Dhaf_4468	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
Dhaf_4468	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
Dhaf_4468	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
Dhaf_4468	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
Dhaf_4468	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
Dhaf_4468	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
Dhaf_4472	PWY-3221	dTDP-L-rhamnose biosynthesis II
Dhaf_4472	PWY-6808	dTDP-D-forosamine biosynthesis
Dhaf_4472	PWY-6942	dTDP-D-desosamine biosynthesis
Dhaf_4472	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
Dhaf_4472	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
Dhaf_4472	PWY-6974	dTDP-L-olivose biosynthesis
Dhaf_4472	PWY-6976	dTDP-L-mycarose biosynthesis
Dhaf_4472	PWY-7104	dTDP-L-megosamine biosynthesis
Dhaf_4472	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
Dhaf_4472	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
Dhaf_4472	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
Dhaf_4472	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
Dhaf_4472	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
Dhaf_4472	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
Dhaf_4472	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
Dhaf_4472	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
Dhaf_4475	PWY-6655	xanthan biosynthesis
Dhaf_4475	PWY-6658	acetan biosynthesis
Dhaf_4514	PWY-3801	sucrose degradation II (sucrose synthase)
Dhaf_4514	PWY-6527	stachyose degradation
Dhaf_4514	PWY-6981	chitin biosynthesis
Dhaf_4514	PWY-7238	sucrose biosynthesis II
Dhaf_4514	PWY-7343	UDP-glucose biosynthesis
Dhaf_4518	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Dhaf_4518	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Dhaf_4532	PWY-1361	benzoyl-CoA degradation I (aerobic)
Dhaf_4532	PWY-5109	2-methylbutanoate biosynthesis
Dhaf_4532	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
Dhaf_4532	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
Dhaf_4532	PWY-5177	glutaryl-CoA degradation
Dhaf_4532	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Dhaf_4532	PWY-6435	4-hydroxybenzoate biosynthesis V
Dhaf_4532	PWY-6583	pyruvate fermentation to butanol I
Dhaf_4532	PWY-6863	pyruvate fermentation to hexanol
Dhaf_4532	PWY-6883	pyruvate fermentation to butanol II
Dhaf_4532	PWY-6944	androstenedione degradation
Dhaf_4532	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
Dhaf_4532	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
Dhaf_4532	PWY-7007	methyl ketone biosynthesis
Dhaf_4532	PWY-7046	4-coumarate degradation (anaerobic)
Dhaf_4532	PWY-7094	fatty acid salvage
Dhaf_4532	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
Dhaf_4532	PWY-735	jasmonic acid biosynthesis
Dhaf_4532	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
Dhaf_4564	PWY-5097	L-lysine biosynthesis VI
Dhaf_4589	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
Dhaf_4610	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
Dhaf_4610	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
Dhaf_4623	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
Dhaf_4634	PWY-1281	sulfoacetaldehyde degradation I
Dhaf_4634	PWY-6637	sulfolactate degradation II
Dhaf_4642	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
Dhaf_4642	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
Dhaf_4681	PWY-4261	glycerol degradation I
Dhaf_4715	PWY-1042	glycolysis IV (plant cytosol)
Dhaf_4715	PWY-1622	formaldehyde assimilation I (serine pathway)
Dhaf_4715	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
Dhaf_4715	PWY-5484	glycolysis II (from fructose 6-phosphate)
Dhaf_4715	PWY-5723	Rubisco shunt
Dhaf_4715	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Dhaf_4715	PWY-6886	1-butanol autotrophic biosynthesis
Dhaf_4715	PWY-6901	superpathway of glucose and xylose degradation
Dhaf_4715	PWY-7003	glycerol degradation to butanol
Dhaf_4715	PWY-7124	ethylene biosynthesis V (engineered)
Dhaf_4715	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
Dhaf_4716	PWY-1042	glycolysis IV (plant cytosol)
Dhaf_4716	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
Dhaf_4716	PWY-5484	glycolysis II (from fructose 6-phosphate)
Dhaf_4716	PWY-5723	Rubisco shunt
Dhaf_4716	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Dhaf_4716	PWY-6886	1-butanol autotrophic biosynthesis
Dhaf_4716	PWY-6901	superpathway of glucose and xylose degradation
Dhaf_4716	PWY-7003	glycerol degradation to butanol
Dhaf_4716	PWY-7124	ethylene biosynthesis V (engineered)
Dhaf_4716	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
Dhaf_4717	PWY-1042	glycolysis IV (plant cytosol)
Dhaf_4717	PWY-5484	glycolysis II (from fructose 6-phosphate)
Dhaf_4717	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Dhaf_4717	PWY-7003	glycerol degradation to butanol
Dhaf_4718	PWY-1042	glycolysis IV (plant cytosol)
Dhaf_4718	PWY-5484	glycolysis II (from fructose 6-phosphate)
Dhaf_4718	PWY-6886	1-butanol autotrophic biosynthesis
Dhaf_4718	PWY-6901	superpathway of glucose and xylose degradation
Dhaf_4718	PWY-7003	glycerol degradation to butanol
Dhaf_4745	PWY-6891	thiazole biosynthesis II (Bacillus)
Dhaf_4745	PWY-6892	thiazole biosynthesis I (E. coli)
Dhaf_4745	PWY-7560	methylerythritol phosphate pathway II
Dhaf_4758	PWY-5971	palmitate biosynthesis II (bacteria and plants)
Dhaf_4758	PWY-5973	<i>cis</i>-vaccenate biosynthesis
Dhaf_4758	PWY-5989	stearate biosynthesis II (bacteria and plants)
Dhaf_4758	PWY-5994	palmitate biosynthesis I (animals and fungi)
Dhaf_4758	PWY-6113	superpathway of mycolate biosynthesis
Dhaf_4758	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
Dhaf_4758	PWY-6519	8-amino-7-oxononanoate biosynthesis I
Dhaf_4758	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Dhaf_4758	PWYG-321	mycolate biosynthesis
Dhaf_4788	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Dhaf_4788	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Dhaf_4791	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Dhaf_4793	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Dhaf_4822	PWY-7335	UDP-<i>N</i>-acetyl-&alpha;-D-mannosaminouronate biosynthesis
Dhaf_4824	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
Dhaf_4825	PWY-7183	pyrimidine nucleobases salvage I
Dhaf_4826	PWY-1622	formaldehyde assimilation I (serine pathway)
Dhaf_4826	PWY-181	photorespiration
Dhaf_4826	PWY-2161	folate polyglutamylation
Dhaf_4826	PWY-2201	folate transformations I
Dhaf_4826	PWY-3661	glycine betaine degradation I
Dhaf_4826	PWY-3661-1	glycine betaine degradation II (mammalian)
Dhaf_4826	PWY-3841	folate transformations II
Dhaf_4826	PWY-5497	purine nucleobases degradation II (anaerobic)
Dhaf_4837	PWY-5484	glycolysis II (from fructose 6-phosphate)
Dhaf_4838	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Dhaf_4838	PWY-5723	Rubisco shunt
Dhaf_4839	PWY-1042	glycolysis IV (plant cytosol)
Dhaf_4839	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Dhaf_4839	PWY-5484	glycolysis II (from fructose 6-phosphate)
Dhaf_4839	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Dhaf_4839	PWY-7385	1,3-propanediol biosynthesis (engineered)
Dhaf_4842	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
Dhaf_4844	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
Dhaf_4844	PWY-7177	UTP and CTP dephosphorylation II
Dhaf_4844	PWY-7185	UTP and CTP dephosphorylation I
Dhaf_4850	PWY-6832	2-aminoethylphosphonate degradation II
Dhaf_4855	PWY-5194	siroheme biosynthesis
Dhaf_4855	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
Dhaf_4857	PWY-5198	factor 420 biosynthesis
Dhaf_4857	PWY-6994	L-pyrrolysine biosynthesis
Dhaf_4863	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
Dhaf_4863	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
Dhaf_4863	PWY-6268	adenosylcobalamin salvage from cobalamin
Dhaf_4863	PWY-6269	adenosylcobalamin salvage from cobinamide II
Dhaf_4870	PWY-5250	methanogenesis from trimethylamine
Dhaf_4876	PWY-2941	L-lysine biosynthesis II
Dhaf_4876	PWY-2942	L-lysine biosynthesis III
Dhaf_4876	PWY-5097	L-lysine biosynthesis VI
Dhaf_4882	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Dhaf_4891	PWY-5437	L-threonine degradation I
Dhaf_4891	PWY-7013	L-1,2-propanediol degradation
Dhaf_4913	PWY-5199	factor 420 polyglutamylation
Dhaf_4919	PWY-6823	molybdenum cofactor biosynthesis
Dhaf_4927	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Dhaf_4928	PWY-6123	inosine-5'-phosphate biosynthesis I
Dhaf_4928	PWY-6124	inosine-5'-phosphate biosynthesis II
Dhaf_4928	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Dhaf_4928	PWY-7234	inosine-5'-phosphate biosynthesis III
