Dole_0002 PWY-6386 UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing) Dole_0002 PWY-6387 UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing) Dole_0004 PWY-2301 myo-inositol biosynthesis Dole_0004 PWY-4702 phytate degradation I Dole_0004 PWY-6363 D-myo-inositol (1,4,5)-trisphosphate degradation Dole_0046 PWY-5041 S-adenosyl-L-methionine cycle II Dole_0046 PWY-6151 S-adenosyl-L-methionine cycle I Dole_0046 PWY-6936 seleno-amino acid biosynthesis Dole_0046 PWY-702 L-methionine biosynthesis II Dole_0057 PWY-7383 anaerobic energy metabolism (invertebrates, cytosol) Dole_0059 PWY-5154 L-arginine biosynthesis III (via N-acetyl-L-citrulline) Dole_0060 PWY-2201 folate transformations I Dole_0060 PWY-3841 folate transformations II Dole_0062 PWY-5531 chlorophyllide a biosynthesis II (anaerobic) Dole_0062 PWY-7159 chlorophyllide a biosynthesis III (aerobic, light independent) Dole_0063 PWY-6823 molybdenum cofactor biosynthesis Dole_0073 PWY-5392 reductive TCA cycle II Dole_0073 PWY-5537 pyruvate fermentation to acetate V Dole_0073 PWY-5538 pyruvate fermentation to acetate VI Dole_0073 PWY-5690 TCA cycle II (plants and fungi) Dole_0073 PWY-5913 TCA cycle VI (obligate autotrophs) Dole_0073 PWY-6728 methylaspartate cycle Dole_0073 PWY-6969 TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase) Dole_0073 PWY-7384 anaerobic energy metabolism (invertebrates, mitochondrial) Dole_0074 PWY-5392 reductive TCA cycle II Dole_0074 PWY-5537 pyruvate fermentation to acetate V Dole_0074 PWY-5538 pyruvate fermentation to acetate VI Dole_0074 PWY-5690 TCA cycle II (plants and fungi) Dole_0074 PWY-5913 TCA cycle VI (obligate autotrophs) Dole_0074 PWY-6728 methylaspartate cycle Dole_0074 PWY-6969 TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase) Dole_0074 PWY-7384 anaerobic energy metabolism (invertebrates, mitochondrial) Dole_0077 PWY-4381 fatty acid biosynthesis initiation I Dole_0077 PWY-5743 3-hydroxypropanoate cycle Dole_0077 PWY-5744 glyoxylate assimilation Dole_0077 PWY-5789 3-hydroxypropanoate/4-hydroxybutanate cycle Dole_0077 PWY-6679 jadomycin biosynthesis Dole_0077 PWY-7388 octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) Dole_0079 PWY-5743 3-hydroxypropanoate cycle Dole_0079 PWY-5789 3-hydroxypropanoate/4-hydroxybutanate cycle Dole_0079 PWY-6728 methylaspartate cycle Dole_0079 PWY-7384 anaerobic energy metabolism (invertebrates, mitochondrial) Dole_0080 PWY-5743 3-hydroxypropanoate cycle Dole_0080 PWY-5789 3-hydroxypropanoate/4-hydroxybutanate cycle Dole_0080 PWY-6728 methylaspartate cycle Dole_0080 PWY-7384 anaerobic energy metabolism (invertebrates, mitochondrial) Dole_0083 PWY-6700 queuosine biosynthesis Dole_0084 PWY-6700 queuosine biosynthesis Dole_0091 PWY-5381 pyridine nucleotide cycling (plants) Dole_0091 PWY-5653 NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde Dole_0093 PWY-1042 glycolysis IV (plant cytosol) Dole_0093 PWY-2221 Entner-Doudoroff pathway III (semi-phosphorylative) Dole_0093 PWY-5484 glycolysis II (from fructose 6-phosphate) Dole_0093 PWY-5723 Rubisco shunt Dole_0093 PWY-6142 gluconeogenesis II (Methanobacterium thermoautotrophicum) Dole_0093 PWY-6886 1-butanol autotrophic biosynthesis Dole_0093 PWY-6901 superpathway of glucose and xylose degradation Dole_0093 PWY-7003 glycerol degradation to butanol Dole_0093 PWY-7124 ethylene biosynthesis V (engineered) Dole_0093 PWY-7218 photosynthetic 3-hydroxybutanoate biosynthesis (engineered) Dole_0120 PWY-5154 L-arginine biosynthesis III (via N-acetyl-L-citrulline) Dole_0120 PWY-5686 UMP biosynthesis Dole_0120 PWY-7400 L-arginine biosynthesis IV (archaebacteria) Dole_0121 PWY-5154 L-arginine biosynthesis III (via N-acetyl-L-citrulline) Dole_0121 PWY-5686 UMP biosynthesis Dole_0121 PWY-7400 L-arginine biosynthesis IV (archaebacteria) Dole_0122 PWY-6121 5-aminoimidazole ribonucleotide biosynthesis I Dole_0122 PWY-6122 5-aminoimidazole ribonucleotide biosynthesis II Dole_0122 PWY-6277 superpathway of 5-aminoimidazole ribonucleotide biosynthesis Dole_0122 PWY-7282 4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast) Dole_0129 PWY-3341 L-proline biosynthesis III Dole_0129 PWY-4981 L-proline biosynthesis II (from arginine) Dole_0129 PWY-6344 L-ornithine degradation II (Stickland reaction) Dole_0138 PWY-5392 reductive TCA cycle II Dole_0138 PWY-5537 pyruvate fermentation to acetate V Dole_0138 PWY-5538 pyruvate fermentation to acetate VI Dole_0138 PWY-5690 TCA cycle II (plants and fungi) Dole_0138 PWY-5913 TCA cycle VI (obligate autotrophs) Dole_0138 PWY-6728 methylaspartate cycle Dole_0138 PWY-6969 TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase) Dole_0138 PWY-7384 anaerobic energy metabolism (invertebrates, mitochondrial) Dole_0145 PWY-6825 phosphatidylcholine biosynthesis V Dole_0151 PWY-5921 glutaminyl-tRNAgln biosynthesis via transamidation Dole_0155 PWY-1361 benzoyl-CoA degradation I (aerobic) Dole_0155 PWY-5109 2-methylbutanoate biosynthesis Dole_0155 PWY-5136 fatty acid β-oxidation II (peroxisome) Dole_0155 PWY-5138 unsaturated, even numbered fatty acid β-oxidation Dole_0155 PWY-5177 glutaryl-CoA degradation Dole_0155 PWY-5789 3-hydroxypropanoate/4-hydroxybutanate cycle Dole_0155 PWY-6435 4-hydroxybenzoate biosynthesis V Dole_0155 PWY-6583 pyruvate fermentation to butanol I Dole_0155 PWY-6863 pyruvate fermentation to hexanol Dole_0155 PWY-6883 pyruvate fermentation to butanol II Dole_0155 PWY-6944 androstenedione degradation Dole_0155 PWY-6945 cholesterol degradation to androstenedione I (cholesterol oxidase) Dole_0155 PWY-6946 cholesterol degradation to androstenedione II (cholesterol dehydrogenase) Dole_0155 PWY-7007 methyl ketone biosynthesis Dole_0155 PWY-7046 4-coumarate degradation (anaerobic) Dole_0155 PWY-7094 fatty acid salvage Dole_0155 PWY-7216 (R)- and (S)-3-hydroxybutanoate biosynthesis Dole_0155 PWY-735 jasmonic acid biosynthesis Dole_0155 PWY-7401 crotonate fermentation (to acetate and cyclohexane carboxylate) Dole_0162 PWY-5392 reductive TCA cycle II Dole_0162 PWY-5537 pyruvate fermentation to acetate V Dole_0162 PWY-5538 pyruvate fermentation to acetate VI Dole_0162 PWY-5690 TCA cycle II (plants and fungi) Dole_0162 PWY-5913 TCA cycle VI (obligate autotrophs) Dole_0162 PWY-6728 methylaspartate cycle Dole_0162 PWY-6969 TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase) Dole_0162 PWY-7384 anaerobic energy metabolism (invertebrates, mitochondrial) Dole_0166 PWY-5921 glutaminyl-tRNAgln biosynthesis via transamidation Dole_0187 PWY-6823 molybdenum cofactor biosynthesis Dole_0202 PWY-6823 molybdenum cofactor biosynthesis Dole_0271 PWY-1361 benzoyl-CoA degradation I (aerobic) Dole_0271 PWY-5109 2-methylbutanoate biosynthesis Dole_0271 PWY-5136 fatty acid β-oxidation II (peroxisome) Dole_0271 PWY-5138 unsaturated, even numbered fatty acid β-oxidation Dole_0271 PWY-5177 glutaryl-CoA degradation Dole_0271 PWY-5789 3-hydroxypropanoate/4-hydroxybutanate cycle Dole_0271 PWY-6435 4-hydroxybenzoate biosynthesis V Dole_0271 PWY-6583 pyruvate fermentation to butanol I Dole_0271 PWY-6863 pyruvate fermentation to hexanol Dole_0271 PWY-6883 pyruvate fermentation to butanol II Dole_0271 PWY-6944 androstenedione degradation Dole_0271 PWY-6945 cholesterol degradation to androstenedione I (cholesterol oxidase) Dole_0271 PWY-6946 cholesterol degradation to androstenedione II (cholesterol dehydrogenase) Dole_0271 PWY-7007 methyl ketone biosynthesis Dole_0271 PWY-7046 4-coumarate degradation (anaerobic) Dole_0271 PWY-7094 fatty acid salvage Dole_0271 PWY-7216 (R)- and (S)-3-hydroxybutanoate biosynthesis Dole_0271 PWY-735 jasmonic acid biosynthesis Dole_0271 PWY-7401 crotonate fermentation (to acetate and cyclohexane carboxylate) Dole_0293 PWY-6121 5-aminoimidazole ribonucleotide biosynthesis I Dole_0293 PWY-6122 5-aminoimidazole ribonucleotide biosynthesis II Dole_0293 PWY-6277 superpathway of 5-aminoimidazole ribonucleotide biosynthesis Dole_0317 PWY-101 photosynthesis light reactions Dole_0317 PWY-7230 ubiquinol-6 biosynthesis from 4-aminobenzoate (eukaryotic) Dole_0339 PWY-1042 glycolysis IV (plant cytosol) Dole_0339 PWY-1622 formaldehyde assimilation I (serine pathway) Dole_0339 PWY-2221 Entner-Doudoroff pathway III (semi-phosphorylative) Dole_0339 PWY-5484 glycolysis II (from fructose 6-phosphate) Dole_0339 PWY-5723 Rubisco shunt Dole_0339 PWY-6142 gluconeogenesis II (Methanobacterium thermoautotrophicum) Dole_0339 PWY-6886 1-butanol autotrophic biosynthesis Dole_0339 PWY-6901 superpathway of glucose and xylose degradation Dole_0339 PWY-7003 glycerol degradation to butanol Dole_0339 PWY-7124 ethylene biosynthesis V (engineered) Dole_0339 PWY-7218 photosynthetic 3-hydroxybutanoate biosynthesis (engineered) Dole_0341 PWY-7176 UTP and CTP de novo biosynthesis Dole_0341 PWY-7177 UTP and CTP dephosphorylation II Dole_0341 PWY-7185 UTP and CTP dephosphorylation I Dole_0357 PWY-5041 S-adenosyl-L-methionine cycle II Dole_0367 PWY-1861 formaldehyde assimilation II (RuMP Cycle) Dole_0367 PWY-5723 Rubisco shunt Dole_0367 PWY-6891 thiazole biosynthesis II (Bacillus) Dole_0367 PWY-6892 thiazole biosynthesis I (E. coli) Dole_0367 PWY-6901 superpathway of glucose and xylose degradation Dole_0367 PWY-7560 methylerythritol phosphate pathway II Dole_0374 PWY-7206 pyrimidine deoxyribonucleotides dephosphorylation Dole_0376 PWY-7383 anaerobic energy metabolism (invertebrates, cytosol) Dole_0379 PWY-5316 nicotine biosynthesis Dole_0379 PWY-7342 superpathway of nicotine biosynthesis Dole_0383 PWY-7560 methylerythritol phosphate pathway II Dole_0388 PWY-5381 pyridine nucleotide cycling (plants) Dole_0391 PWY-6987 lipoate biosynthesis and incorporation III (Bacillus) Dole_0391 PWY-7381 lipoate biosynthesis and incorporation (glycine cleavage system, yeast) Dole_0458 PWY-2201 folate transformations I Dole_0458 PWY-3841 folate transformations II Dole_0467 PWY-2161 folate polyglutamylation Dole_0469 PWY-7219 adenosine ribonucleotides de novo biosynthesis Dole_0470 PWY-7219 adenosine ribonucleotides de novo biosynthesis Dole_0480 PWY-7560 methylerythritol phosphate pathway II Dole_0482 PWY-6121 5-aminoimidazole ribonucleotide biosynthesis I Dole_0482 PWY-6122 5-aminoimidazole ribonucleotide biosynthesis II Dole_0482 PWY-6277 superpathway of 5-aminoimidazole ribonucleotide biosynthesis Dole_0483 PWY-6121 5-aminoimidazole ribonucleotide biosynthesis I Dole_0483 PWY-6122 5-aminoimidazole ribonucleotide biosynthesis II Dole_0483 PWY-6277 superpathway of 5-aminoimidazole ribonucleotide biosynthesis Dole_0496 PWY-6703 preQ0 biosynthesis Dole_0497 PWY-6703 preQ0 biosynthesis Dole_0499 PWY-1042 glycolysis IV (plant cytosol) Dole_0499 PWY-5484 glycolysis II (from fructose 6-phosphate) Dole_0499 PWY-6142 gluconeogenesis II (Methanobacterium thermoautotrophicum) Dole_0499 PWY-7003 glycerol degradation to butanol Dole_0500 PWY-1042 glycolysis IV (plant cytosol) Dole_0500 PWY-5484 glycolysis II (from fructose 6-phosphate) Dole_0500 PWY-6901 superpathway of glucose and xylose degradation Dole_0500 PWY-7003 glycerol degradation to butanol Dole_0510 PWY-1269 CMP-3-deoxy-D-manno-octulosonate biosynthesis I Dole_0510 PWY-5111 CMP-3-deoxy-D-manno-octulosonate biosynthesis II (from D-arabinose 5-phosphate) Dole_0511 PWY-1269 CMP-3-deoxy-D-manno-octulosonate biosynthesis I Dole_0511 PWY-5111 CMP-3-deoxy-D-manno-octulosonate biosynthesis II (from D-arabinose 5-phosphate) Dole_0514 PWY-5686 UMP biosynthesis Dole_0515 PWY-5686 UMP biosynthesis Dole_0523 PWY-3821 galactose degradation III Dole_0523 PWY-6317 galactose degradation I (Leloir pathway) Dole_0523 PWY-6397 mycolyl-arabinogalactan-peptidoglycan complex biosynthesis Dole_0523 PWY-6527 stachyose degradation Dole_0523 PWY-7328 superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis Dole_0523 PWY-7344 UDP-D-galactose biosynthesis Dole_0538 PWY-6386 UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing) Dole_0538 PWY-6387 UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing) Dole_0586 PWY-5392 reductive TCA cycle II Dole_0586 PWY-5537 pyruvate fermentation to acetate V Dole_0586 PWY-5538 pyruvate fermentation to acetate VI Dole_0586 PWY-5690 TCA cycle II (plants and fungi) Dole_0586 PWY-5913 TCA cycle VI (obligate autotrophs) Dole_0586 PWY-6728 methylaspartate cycle Dole_0586 PWY-6969 TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase) Dole_0586 PWY-7384 anaerobic energy metabolism (invertebrates, mitochondrial) Dole_0601 PWY-7219 adenosine ribonucleotides de novo biosynthesis Dole_0603 PWY-7219 adenosine ribonucleotides de novo biosynthesis Dole_0651 PWY-5384 sucrose degradation IV (sucrose phosphorylase) Dole_0655 PWY-2002 isoflavonoid biosynthesis I Dole_0655 PWY-5059 pinobanksin biosynthesis Dole_0655 PWY-6325 echinatin biosynthesis Dole_0655 PWY-6787 flavonoid biosynthesis (in equisetum) Dole_0655 PWY-7397 naringenin biosynthesis (engineered) Dole_0674 PWY-5667 CDP-diacylglycerol biosynthesis I Dole_0674 PWY-5981 CDP-diacylglycerol biosynthesis III Dole_0677 PWY-1042 glycolysis IV (plant cytosol) Dole_0677 PWY-5484 glycolysis II (from fructose 6-phosphate) Dole_0677 PWY-6886 1-butanol autotrophic biosynthesis Dole_0677 PWY-6901 superpathway of glucose and xylose degradation Dole_0677 PWY-7003 glycerol degradation to butanol Dole_0680 PWY-6519 8-amino-7-oxononanoate biosynthesis I Dole_0680 PWY-6578 8-amino-7-oxononanoate biosynthesis III Dole_0680 PWY-7147 8-amino-7-oxononanoate biosynthesis II Dole_0681 PWY-7380 biotin biosynthesis from 8-amino-7-oxononanoate II Dole_0682 PWY-7380 biotin biosynthesis from 8-amino-7-oxononanoate II Dole_0683 PWY-6823 molybdenum cofactor biosynthesis Dole_0684 PWY-6823 molybdenum cofactor biosynthesis Dole_0693 PWY-5392 reductive TCA cycle II Dole_0693 PWY-561 superpathway of glyoxylate cycle and fatty acid degradation Dole_0693 PWY-5690 TCA cycle II (plants and fungi) Dole_0693 PWY-5913 TCA cycle VI (obligate autotrophs) Dole_0693 PWY-6728 methylaspartate cycle Dole_0693 PWY-6969 TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase) Dole_0693 PWY-7254 TCA cycle VII (acetate-producers) Dole_0693 PWY-7384 anaerobic energy metabolism (invertebrates, mitochondrial) Dole_0748 PWY-5531 chlorophyllide a biosynthesis II (anaerobic) Dole_0748 PWY-6683 sulfate reduction III (assimilatory) Dole_0748 PWY-7159 chlorophyllide a biosynthesis III (aerobic, light independent) Dole_0749 PWY-6897 thiamin salvage II Dole_0749 PWY-7353 4-methyl-5(β-hydroxyethyl)thiazole salvage (yeast) Dole_0749 PWY-7357 thiamin formation from pyrithiamine and oxythiamine (yeast) Dole_0752 PWY-5344 L-homocysteine biosynthesis Dole_0753 PWY-5344 L-homocysteine biosynthesis Dole_0753 PWY-7174 S-methyl-5-thio-α-D-ribose 1-phosphate degradation II Dole_0756 PWY-6823 molybdenum cofactor biosynthesis Dole_0756 PWY-6891 thiazole biosynthesis II (Bacillus) Dole_0756 PWY-6892 thiazole biosynthesis I (E. coli) Dole_0756 PWY-7250 [2Fe-2S] iron-sulfur cluster biosynthesis Dole_0762 PWY-4202 arsenate detoxification I (glutaredoxin) Dole_0769 PWY-6386 UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing) Dole_0769 PWY-6387 UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing) Dole_0773 PWY-2941 L-lysine biosynthesis II Dole_0773 PWY-2942 L-lysine biosynthesis III Dole_0773 PWY-5097 L-lysine biosynthesis VI Dole_0773 PWY-6559 spermidine biosynthesis II Dole_0773 PWY-6562 norspermidine biosynthesis Dole_0773 PWY-7153 grixazone biosynthesis Dole_0775 PWY-6938 NADH repair Dole_0817 PWY-5451 acetone degradation I (to methylglyoxal) Dole_0817 PWY-6588 pyruvate fermentation to acetone Dole_0817 PWY-6876 isopropanol biosynthesis Dole_0817 PWY-7466 acetone degradation III (to propane-1,2-diol) Dole_0830 PWY-1361 benzoyl-CoA degradation I (aerobic) Dole_0830 PWY-5109 2-methylbutanoate biosynthesis Dole_0830 PWY-5136 fatty acid β-oxidation II (peroxisome) Dole_0830 PWY-5138 unsaturated, even numbered fatty acid β-oxidation Dole_0830 PWY-5177 glutaryl-CoA degradation Dole_0830 PWY-5789 3-hydroxypropanoate/4-hydroxybutanate cycle Dole_0830 PWY-6435 4-hydroxybenzoate biosynthesis V Dole_0830 PWY-6583 pyruvate fermentation to butanol I Dole_0830 PWY-6863 pyruvate fermentation to hexanol Dole_0830 PWY-6883 pyruvate fermentation to butanol II Dole_0830 PWY-6944 androstenedione degradation Dole_0830 PWY-6945 cholesterol degradation to androstenedione I (cholesterol oxidase) Dole_0830 PWY-6946 cholesterol degradation to androstenedione II (cholesterol dehydrogenase) Dole_0830 PWY-7007 methyl ketone biosynthesis Dole_0830 PWY-7046 4-coumarate degradation (anaerobic) Dole_0830 PWY-7094 fatty acid salvage Dole_0830 PWY-7216 (R)- and (S)-3-hydroxybutanoate biosynthesis Dole_0830 PWY-735 jasmonic acid biosynthesis Dole_0830 PWY-7401 crotonate fermentation (to acetate and cyclohexane carboxylate) Dole_0838 PWY-1341 phenylacetate degradation II (anaerobic) Dole_0838 PWY-6318 L-phenylalanine degradation IV (mammalian, via side chain) Dole_0846 PWY-1881 formate oxidation to CO2 Dole_0846 PWY-5497 purine nucleobases degradation II (anaerobic) Dole_0846 PWY-6696 oxalate degradation III Dole_0847 PWY-5067 glycogen biosynthesis II (from UDP-D-Glucose) Dole_0847 PWY-622 starch biosynthesis Dole_0848 PWY-622 starch biosynthesis Dole_0849 PWY-5941 glycogen degradation II (eukaryotic) Dole_0849 PWY-622 starch biosynthesis Dole_0849 PWY-6731 starch degradation III Dole_0849 PWY-6737 starch degradation V Dole_0849 PWY-7238 sucrose biosynthesis II Dole_0851 PWY-5941 glycogen degradation II (eukaryotic) Dole_0851 PWY-6724 starch degradation II Dole_0851 PWY-6737 starch degradation V Dole_0851 PWY-7238 sucrose biosynthesis II Dole_0860 PWY-1042 glycolysis IV (plant cytosol) Dole_0860 PWY-1861 formaldehyde assimilation II (RuMP Cycle) Dole_0860 PWY-5484 glycolysis II (from fructose 6-phosphate) Dole_0860 PWY-7385 1,3-propanediol biosynthesis (engineered) Dole_0908 PWY-5265 peptidoglycan biosynthesis II (staphylococci) Dole_0908 PWY-6385 peptidoglycan biosynthesis III (mycobacteria) Dole_0908 PWY-6470 peptidoglycan biosynthesis V (β-lactam resistance) Dole_0908 PWY-6471 peptidoglycan biosynthesis IV (Enterococcus faecium) Dole_0933 PWY-723 alkylnitronates degradation Dole_0961 PWY-6409 pyoverdine I biosynthesis Dole_0961 PWY-6562 norspermidine biosynthesis Dole_0961 PWY-761 rhizobactin 1021 biosynthesis Dole_0963 PWY-5188 tetrapyrrole biosynthesis I (from glutamate) Dole_0963 PWY-5189 tetrapyrrole biosynthesis II (from glycine) Dole_0966 PWY-7221 guanosine ribonucleotides de novo biosynthesis Dole_0968 PWY-1269 CMP-3-deoxy-D-manno-octulosonate biosynthesis I Dole_0968 PWY-5111 CMP-3-deoxy-D-manno-octulosonate biosynthesis II (from D-arabinose 5-phosphate) Dole_0983 PWY-5667 CDP-diacylglycerol biosynthesis I Dole_0983 PWY-5981 CDP-diacylglycerol biosynthesis III Dole_0983 PWY-7411 superpathway of phosphatidate biosynthesis (yeast) Dole_0983 PWY-7417 phospholipid remodeling (phosphatidate, yeast) Dole_1002 PWY-5278 sulfite oxidation III Dole_1002 PWY-5340 sulfate activation for sulfonation Dole_1002 PWY-6683 sulfate reduction III (assimilatory) Dole_1002 PWY-6932 selenate reduction Dole_1003 PWY-5747 2-methylcitrate cycle II Dole_1010 PWY-3221 dTDP-L-rhamnose biosynthesis II Dole_1010 PWY-6808 dTDP-D-forosamine biosynthesis Dole_1010 PWY-6942 dTDP-D-desosamine biosynthesis Dole_1010 PWY-6953 dTDP-3-acetamido-3,6-dideoxy-α-D-galactose biosynthesis Dole_1010 PWY-6973 dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis Dole_1010 PWY-6974 dTDP-L-olivose biosynthesis Dole_1010 PWY-6976 dTDP-L-mycarose biosynthesis Dole_1010 PWY-7104 dTDP-L-megosamine biosynthesis Dole_1010 PWY-7301 dTDP-β-L-noviose biosynthesis Dole_1010 PWY-7312 dTDP-D-β-fucofuranose biosynthesis Dole_1010 PWY-7315 dTDP-N-acetylthomosamine biosynthesis Dole_1010 PWY-7316 dTDP-N-acetylviosamine biosynthesis Dole_1010 PWY-7318 dTDP-3-acetamido-3,6-dideoxy-α-D-glucose biosynthesis Dole_1010 PWY-7413 dTDP-6-deoxy-α-D-allose biosynthesis Dole_1010 PWY-7414 dTDP-α-D-mycaminose biosynthesis Dole_1010 PWY-7440 dTDP-β-L-4-epi-vancosamine biosynthesis Dole_1011 PWY-3221 dTDP-L-rhamnose biosynthesis II Dole_1011 PWY-6808 dTDP-D-forosamine biosynthesis Dole_1011 PWY-6942 dTDP-D-desosamine biosynthesis Dole_1011 PWY-6953 dTDP-3-acetamido-3,6-dideoxy-α-D-galactose biosynthesis Dole_1011 PWY-6973 dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis Dole_1011 PWY-6974 dTDP-L-olivose biosynthesis Dole_1011 PWY-6976 dTDP-L-mycarose biosynthesis Dole_1011 PWY-7104 dTDP-L-megosamine biosynthesis Dole_1011 PWY-7301 dTDP-β-L-noviose biosynthesis Dole_1011 PWY-7312 dTDP-D-β-fucofuranose biosynthesis Dole_1011 PWY-7315 dTDP-N-acetylthomosamine biosynthesis Dole_1011 PWY-7316 dTDP-N-acetylviosamine biosynthesis Dole_1011 PWY-7318 dTDP-3-acetamido-3,6-dideoxy-α-D-glucose biosynthesis Dole_1011 PWY-7413 dTDP-6-deoxy-α-D-allose biosynthesis Dole_1011 PWY-7414 dTDP-α-D-mycaminose biosynthesis Dole_1011 PWY-7440 dTDP-β-L-4-epi-vancosamine biosynthesis Dole_1013 PWY-5278 sulfite oxidation III Dole_1013 PWY-5340 sulfate activation for sulfonation Dole_1013 PWY-6683 sulfate reduction III (assimilatory) Dole_1013 PWY-6932 selenate reduction Dole_1020 PWY-4261 glycerol degradation I Dole_1020 PWY-6118 glycerol-3-phosphate shuttle Dole_1020 PWY-6952 glycerophosphodiester degradation Dole_1021 PWY-4261 glycerol degradation I Dole_1021 PWY-6118 glycerol-3-phosphate shuttle Dole_1021 PWY-6952 glycerophosphodiester degradation Dole_1076 PWY-5921 glutaminyl-tRNAgln biosynthesis via transamidation Dole_1084 PWY-6654 phosphopantothenate biosynthesis III Dole_1097 PWY-5958 acridone alkaloid biosynthesis Dole_1097 PWY-6543 4-aminobenzoate biosynthesis Dole_1097 PWY-6660 2-heptyl-3-hydroxy-4(1H)-quinolone biosynthesis Dole_1097 PWY-6661 4-hydroxy-2(1H)-quinolone biosynthesis Dole_1097 PWY-6722 candicidin biosynthesis Dole_1098 PWY-5958 acridone alkaloid biosynthesis Dole_1098 PWY-6660 2-heptyl-3-hydroxy-4(1H)-quinolone biosynthesis Dole_1098 PWY-6661 4-hydroxy-2(1H)-quinolone biosynthesis Dole_1106 PWY-5250 methanogenesis from trimethylamine Dole_1109 PWY-5250 methanogenesis from trimethylamine Dole_1111 PWY-5250 methanogenesis from trimethylamine Dole_1131 PWY-6891 thiazole biosynthesis II (Bacillus) Dole_1131 PWY-6892 thiazole biosynthesis I (E. coli) Dole_1131 PWY-7560 methylerythritol phosphate pathway II Dole_1146 PWY-7219 adenosine ribonucleotides de novo biosynthesis Dole_1151 PWY-2201 folate transformations I Dole_1151 PWY-3841 folate transformations II Dole_1163 PWY-5381 pyridine nucleotide cycling (plants) Dole_1163 PWY-5695 urate biosynthesis/inosine 5'-phosphate degradation Dole_1163 PWY-6596 adenosine nucleotides degradation I Dole_1163 PWY-6606 guanosine nucleotides degradation II Dole_1163 PWY-6607 guanosine nucleotides degradation I Dole_1163 PWY-6608 guanosine nucleotides degradation III Dole_1163 PWY-7185 UTP and CTP dephosphorylation I Dole_1165 PWY-6545 pyrimidine deoxyribonucleotides de novo biosynthesis III Dole_1165 PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I Dole_1165 PWY-7187 pyrimidine deoxyribonucleotides de novo biosynthesis II Dole_1165 PWY-7197 pyrimidine deoxyribonucleotide phosphorylation Dole_1165 PWY-7198 pyrimidine deoxyribonucleotides de novo biosynthesis IV Dole_1165 PWY-7210 pyrimidine deoxyribonucleotides biosynthesis from CTP Dole_1166 PWY-6936 seleno-amino acid biosynthesis Dole_1175 PWY-6749 CMP-legionaminate biosynthesis I Dole_1179 PWY-7383 anaerobic energy metabolism (invertebrates, cytosol) Dole_1182 PWY-723 alkylnitronates degradation Dole_1224 PWY-5188 tetrapyrrole biosynthesis I (from glutamate) Dole_1224 PWY-5189 tetrapyrrole biosynthesis II (from glycine) Dole_1228 PWY-5508 adenosylcobalamin biosynthesis from cobyrinate a,c-diamide II Dole_1228 PWY-5509 adenosylcobalamin biosynthesis from cobyrinate a,c-diamide I Dole_1228 PWY-6268 adenosylcobalamin salvage from cobalamin Dole_1228 PWY-6269 adenosylcobalamin salvage from cobinamide II Dole_1229 PWY-5508 adenosylcobalamin biosynthesis from cobyrinate a,c-diamide II Dole_1229 PWY-5509 adenosylcobalamin biosynthesis from cobyrinate a,c-diamide I Dole_1229 PWY-6269 adenosylcobalamin salvage from cobinamide II Dole_1230 PWY-5508 adenosylcobalamin biosynthesis from cobyrinate a,c-diamide II Dole_1230 PWY-5509 adenosylcobalamin biosynthesis from cobyrinate a,c-diamide I Dole_1230 PWY-6269 adenosylcobalamin salvage from cobinamide II Dole_1246 PWY-5392 reductive TCA cycle II Dole_1246 PWY-5537 pyruvate fermentation to acetate V Dole_1246 PWY-5538 pyruvate fermentation to acetate VI Dole_1246 PWY-5690 TCA cycle II (plants and fungi) Dole_1246 PWY-5913 TCA cycle VI (obligate autotrophs) Dole_1246 PWY-6728 methylaspartate cycle Dole_1246 PWY-6969 TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase) Dole_1246 PWY-7384 anaerobic energy metabolism (invertebrates, mitochondrial) Dole_1248 PWY-5384 sucrose degradation IV (sucrose phosphorylase) Dole_1265 PWY-5269 cardiolipin biosynthesis II Dole_1265 PWY-5668 cardiolipin biosynthesis I Dole_1271 PWY-5198 factor 420 biosynthesis Dole_1271 PWY-7371 1,4-dihydroxy-6-naphthoate biosynthesis II Dole_1271 PWY-7374 1,4-dihydroxy-6-naphthoate biosynthesis I Dole_1272 PWY-5198 factor 420 biosynthesis Dole_1276 PWY-7371 1,4-dihydroxy-6-naphthoate biosynthesis II Dole_1276 PWY-7374 1,4-dihydroxy-6-naphthoate biosynthesis I Dole_1278 PWY-7374 1,4-dihydroxy-6-naphthoate biosynthesis I Dole_1279 PWY-7346 UDP-α-D-glucuronate biosynthesis (from UDP-glucose) Dole_1281 PWY-5738 GDP-6-deoxy-D-talose biosynthesis Dole_1281 PWY-5739 GDP-D-perosamine biosynthesis Dole_1281 PWY-5740 GDP-L-colitose biosynthesis Dole_1281 PWY-66 GDP-L-fucose biosynthesis I (from GDP-D-mannose) Dole_1282 PWY-66 GDP-L-fucose biosynthesis I (from GDP-D-mannose) Dole_1301 PWY-5265 peptidoglycan biosynthesis II (staphylococci) Dole_1301 PWY-6470 peptidoglycan biosynthesis V (β-lactam resistance) Dole_1301 PWY-6471 peptidoglycan biosynthesis IV (Enterococcus faecium) Dole_1306 PWY-4361 S-methyl-5-thio-α-D-ribose 1-phosphate degradation Dole_1306 PWY-7174 S-methyl-5-thio-α-D-ribose 1-phosphate degradation II Dole_1322 PWY-5941 glycogen degradation II (eukaryotic) Dole_1322 PWY-622 starch biosynthesis Dole_1322 PWY-6731 starch degradation III Dole_1322 PWY-6737 starch degradation V Dole_1322 PWY-7238 sucrose biosynthesis II Dole_1336 PWY-7205 CMP phosphorylation Dole_1363 PWY-5340 sulfate activation for sulfonation Dole_1395 PWY-4261 glycerol degradation I Dole_1396 PWY-2941 L-lysine biosynthesis II Dole_1396 PWY-2942 L-lysine biosynthesis III Dole_1396 PWY-5097 L-lysine biosynthesis VI Dole_1423 PWY-6599 guanine and guanosine salvage II Dole_1423 PWY-6609 adenine and adenosine salvage III Dole_1423 PWY-6610 adenine and adenosine salvage IV Dole_1423 PWY-6620 guanine and guanosine salvage Dole_1426 PWY-6386 UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing) Dole_1426 PWY-6387 UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing) Dole_1427 PWY-6121 5-aminoimidazole ribonucleotide biosynthesis I Dole_1427 PWY-6122 5-aminoimidazole ribonucleotide biosynthesis II Dole_1427 PWY-6277 superpathway of 5-aminoimidazole ribonucleotide biosynthesis Dole_1446 PWY-5154 L-arginine biosynthesis III (via N-acetyl-L-citrulline) Dole_1446 PWY-5686 UMP biosynthesis Dole_1446 PWY-7400 L-arginine biosynthesis IV (archaebacteria) Dole_1461 PWY-5372 carbon tetrachloride degradation II Dole_1461 PWY-6780 hydrogen production VI Dole_1490 PWY-5316 nicotine biosynthesis Dole_1490 PWY-7342 superpathway of nicotine biosynthesis Dole_1491 PWY-5839 menaquinol-7 biosynthesis Dole_1491 PWY-5844 menaquinol-9 biosynthesis Dole_1491 PWY-5849 menaquinol-6 biosynthesis Dole_1491 PWY-5890 menaquinol-10 biosynthesis Dole_1491 PWY-5891 menaquinol-11 biosynthesis Dole_1491 PWY-5892 menaquinol-12 biosynthesis Dole_1491 PWY-5895 menaquinol-13 biosynthesis Dole_1509 PWY-7205 CMP phosphorylation Dole_1515 PWY-6123 inosine-5'-phosphate biosynthesis I Dole_1515 PWY-6124 inosine-5'-phosphate biosynthesis II Dole_1515 PWY-7234 inosine-5'-phosphate biosynthesis III Dole_1516 PWY-6123 inosine-5'-phosphate biosynthesis I Dole_1516 PWY-6124 inosine-5'-phosphate biosynthesis II Dole_1516 PWY-7234 inosine-5'-phosphate biosynthesis III Dole_1526 PWY-723 alkylnitronates degradation Dole_1539 PWY-7204 pyridoxal 5'-phosphate salvage II (plants) Dole_1539 PWY-7282 4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast) Dole_1545 PWY-5188 tetrapyrrole biosynthesis I (from glutamate) Dole_1550 PWY-4381 fatty acid biosynthesis initiation I Dole_1556 PWY-3781 aerobic respiration I (cytochrome c) Dole_1556 PWY-4302 aerobic respiration III (alternative oxidase pathway) Dole_1556 PWY-561 superpathway of glyoxylate cycle and fatty acid degradation Dole_1556 PWY-5690 TCA cycle II (plants and fungi) Dole_1556 PWY-6728 methylaspartate cycle Dole_1556 PWY-6969 TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase) Dole_1556 PWY-7254 TCA cycle VII (acetate-producers) Dole_1556 PWY-7279 aerobic respiration II (cytochrome c) (yeast) Dole_1557 PWY-3781 aerobic respiration I (cytochrome c) Dole_1557 PWY-4302 aerobic respiration III (alternative oxidase pathway) Dole_1557 PWY-561 superpathway of glyoxylate cycle and fatty acid degradation Dole_1557 PWY-5690 TCA cycle II (plants and fungi) Dole_1557 PWY-6728 methylaspartate cycle Dole_1557 PWY-6969 TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase) Dole_1557 PWY-7254 TCA cycle VII (acetate-producers) Dole_1557 PWY-7279 aerobic respiration II (cytochrome c) (yeast) Dole_1568 PWY-5958 acridone alkaloid biosynthesis Dole_1568 PWY-6660 2-heptyl-3-hydroxy-4(1H)-quinolone biosynthesis Dole_1568 PWY-6661 4-hydroxy-2(1H)-quinolone biosynthesis Dole_1569 PWY-5958 acridone alkaloid biosynthesis Dole_1569 PWY-6660 2-heptyl-3-hydroxy-4(1H)-quinolone biosynthesis Dole_1569 PWY-6661 4-hydroxy-2(1H)-quinolone biosynthesis Dole_1595 PWY-5188 tetrapyrrole biosynthesis I (from glutamate) Dole_1641 PWY-5651 L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde Dole_1641 PWY-6309 L-tryptophan degradation XI (mammalian, via kynurenine) Dole_1645 PWY-6121 5-aminoimidazole ribonucleotide biosynthesis I Dole_1645 PWY-6613 tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate Dole_1662 PWY-6891 thiazole biosynthesis II (Bacillus) Dole_1662 PWY-6892 thiazole biosynthesis I (E. coli) Dole_1662 PWY-7560 methylerythritol phosphate pathway II Dole_1666 PWY-7560 methylerythritol phosphate pathway II Dole_1675 PWY-4381 fatty acid biosynthesis initiation I Dole_1675 PWY-6799 fatty acid biosynthesis (plant mitochondria) Dole_1675 PWY-723 alkylnitronates degradation Dole_1675 PWY-7388 octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) Dole_1677 PWY-5971 palmitate biosynthesis II (bacteria and plants) Dole_1677 PWY-5973 cis-vaccenate biosynthesis Dole_1677 PWY-5989 stearate biosynthesis II (bacteria and plants) Dole_1677 PWY-5994 palmitate biosynthesis I (animals and fungi) Dole_1677 PWY-6113 superpathway of mycolate biosynthesis Dole_1677 PWY-6282 palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate) Dole_1677 PWY-6519 8-amino-7-oxononanoate biosynthesis I Dole_1677 PWY-7388 octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) Dole_1677 PWYG-321 mycolate biosynthesis Dole_1683 PWY-1361 benzoyl-CoA degradation I (aerobic) Dole_1683 PWY-5109 2-methylbutanoate biosynthesis Dole_1683 PWY-5136 fatty acid β-oxidation II (peroxisome) Dole_1683 PWY-5138 unsaturated, even numbered fatty acid β-oxidation Dole_1683 PWY-5177 glutaryl-CoA degradation Dole_1683 PWY-5789 3-hydroxypropanoate/4-hydroxybutanate cycle Dole_1683 PWY-6435 4-hydroxybenzoate biosynthesis V Dole_1683 PWY-6583 pyruvate fermentation to butanol I Dole_1683 PWY-6863 pyruvate fermentation to hexanol Dole_1683 PWY-6883 pyruvate fermentation to butanol II Dole_1683 PWY-6944 androstenedione degradation Dole_1683 PWY-6945 cholesterol degradation to androstenedione I (cholesterol oxidase) Dole_1683 PWY-6946 cholesterol degradation to androstenedione II (cholesterol dehydrogenase) Dole_1683 PWY-7007 methyl ketone biosynthesis Dole_1683 PWY-7046 4-coumarate degradation (anaerobic) Dole_1683 PWY-7094 fatty acid salvage Dole_1683 PWY-7216 (R)- and (S)-3-hydroxybutanoate biosynthesis Dole_1683 PWY-735 jasmonic acid biosynthesis Dole_1683 PWY-7401 crotonate fermentation (to acetate and cyclohexane carboxylate) Dole_1694 PWY-1042 glycolysis IV (plant cytosol) Dole_1694 PWY-1861 formaldehyde assimilation II (RuMP Cycle) Dole_1694 PWY-5484 glycolysis II (from fructose 6-phosphate) Dole_1694 PWY-7385 1,3-propanediol biosynthesis (engineered) Dole_1710 PWY-3821 galactose degradation III Dole_1710 PWY-6317 galactose degradation I (Leloir pathway) Dole_1710 PWY-6527 stachyose degradation Dole_1728 PWY-5316 nicotine biosynthesis Dole_1728 PWY-5381 pyridine nucleotide cycling (plants) Dole_1728 PWY-5653 NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde Dole_1728 PWY-7342 superpathway of nicotine biosynthesis Dole_1745 PWY-3841 folate transformations II Dole_1745 PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I Dole_1745 PWY-7187 pyrimidine deoxyribonucleotides de novo biosynthesis II Dole_1745 PWY-7198 pyrimidine deoxyribonucleotides de novo biosynthesis IV Dole_1745 PWY-7199 pyrimidine deoxyribonucleosides salvage Dole_1745 PWY-7210 pyrimidine deoxyribonucleotides biosynthesis from CTP Dole_1764 PWY-2781 cis-zeatin biosynthesis Dole_1765 PWY-6893 thiamin diphosphate biosynthesis II (Bacillus) Dole_1765 PWY-6894 thiamin diphosphate biosynthesis I (E. coli) Dole_1765 PWY-6896 thiamin salvage I Dole_1765 PWY-6897 thiamin salvage II Dole_1765 PWY-6907 thiamin diphosphate biosynthesis III (Staphylococcus) Dole_1765 PWY-6908 thiamin diphosphate biosynthesis IV (eukaryotes) Dole_1765 PWY-7353 4-methyl-5(β-hydroxyethyl)thiazole salvage (yeast) Dole_1765 PWY-7357 thiamin formation from pyrithiamine and oxythiamine (yeast) Dole_1828 PWY-7335 UDP-N-acetyl-α-D-mannosaminouronate biosynthesis Dole_1848 PWY-3821 galactose degradation III Dole_1848 PWY-6317 galactose degradation I (Leloir pathway) Dole_1848 PWY-6397 mycolyl-arabinogalactan-peptidoglycan complex biosynthesis Dole_1848 PWY-6527 stachyose degradation Dole_1848 PWY-7328 superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis Dole_1848 PWY-7344 UDP-D-galactose biosynthesis Dole_1849 PWY-3801 sucrose degradation II (sucrose synthase) Dole_1849 PWY-5054 sorbitol biosynthesis I Dole_1849 PWY-5384 sucrose degradation IV (sucrose phosphorylase) Dole_1849 PWY-5514 UDP-N-acetyl-D-galactosamine biosynthesis II Dole_1849 PWY-5659 GDP-mannose biosynthesis Dole_1849 PWY-6142 gluconeogenesis II (Methanobacterium thermoautotrophicum) Dole_1849 PWY-621 sucrose degradation III (sucrose invertase) Dole_1849 PWY-622 starch biosynthesis Dole_1849 PWY-6531 mannitol cycle Dole_1849 PWY-6981 chitin biosynthesis Dole_1849 PWY-7238 sucrose biosynthesis II Dole_1849 PWY-7347 sucrose biosynthesis III Dole_1849 PWY-7385 1,3-propanediol biosynthesis (engineered) Dole_1850 PWY-4381 fatty acid biosynthesis initiation I Dole_1854 PWY-6123 inosine-5'-phosphate biosynthesis I Dole_1854 PWY-6124 inosine-5'-phosphate biosynthesis II Dole_1854 PWY-7219 adenosine ribonucleotides de novo biosynthesis Dole_1854 PWY-7234 inosine-5'-phosphate biosynthesis III Dole_1886 PWY-5695 urate biosynthesis/inosine 5'-phosphate degradation Dole_1886 PWY-6596 adenosine nucleotides degradation I Dole_1886 PWY-7221 guanosine ribonucleotides de novo biosynthesis Dole_1889 PWY-4381 fatty acid biosynthesis initiation I Dole_1889 PWY-5743 3-hydroxypropanoate cycle Dole_1889 PWY-5744 glyoxylate assimilation Dole_1889 PWY-5789 3-hydroxypropanoate/4-hydroxybutanate cycle Dole_1889 PWY-6679 jadomycin biosynthesis Dole_1889 PWY-7388 octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) Dole_1891 PWY-6386 UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing) Dole_1891 PWY-6387 UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing) Dole_1908 PWY-5913 TCA cycle VI (obligate autotrophs) Dole_1908 PWY-6549 L-glutamine biosynthesis III Dole_1908 PWY-6728 methylaspartate cycle Dole_1908 PWY-6969 TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase) Dole_1908 PWY-7124 ethylene biosynthesis V (engineered) Dole_1908 PWY-7254 TCA cycle VII (acetate-producers) Dole_1908 PWY-7268 NAD/NADP-NADH/NADPH cytosolic interconversion (yeast) Dole_1910 PWY-7221 guanosine ribonucleotides de novo biosynthesis Dole_1947 PWY-6163 chorismate biosynthesis from 3-dehydroquinate Dole_1948 PWY-6163 chorismate biosynthesis from 3-dehydroquinate Dole_1949 PWY-6163 chorismate biosynthesis from 3-dehydroquinate Dole_1950 PWY-3461 L-tyrosine biosynthesis II Dole_1950 PWY-3462 L-phenylalanine biosynthesis II Dole_1950 PWY-6120 L-tyrosine biosynthesis III Dole_1950 PWY-6627 salinosporamide A biosynthesis Dole_1950 PWY-7432 L-phenylalanine biosynthesis III (cytosolic, plants) Dole_1951 PWY-6160 3-dehydroquinate biosynthesis II (archaea) Dole_1952 PWY-6160 3-dehydroquinate biosynthesis II (archaea) Dole_1959 PWY-5833 CDP-4-dehydro-3,6-dideoxy-D-glucose biosynthesis Dole_1959 PWY-5940 streptomycin biosynthesis Dole_1960 PWY-5833 CDP-4-dehydro-3,6-dideoxy-D-glucose biosynthesis Dole_1975 PWY-6672 cis-genanyl-CoA degradation Dole_1975 PWY-7118 chitin degradation to ethanol Dole_1979 PWY-6654 phosphopantothenate biosynthesis III Dole_1982 PWY-7205 CMP phosphorylation Dole_1991 PWY-5667 CDP-diacylglycerol biosynthesis I Dole_1991 PWY-7411 superpathway of phosphatidate biosynthesis (yeast) Dole_2008 PWY-4381 fatty acid biosynthesis initiation I Dole_2015 PWY-3861 mannitol degradation II Dole_2015 PWY-3881 mannitol biosynthesis Dole_2015 PWY-5659 GDP-mannose biosynthesis Dole_2015 PWY-7456 mannan degradation Dole_2015 PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) Dole_2024 PWY-6749 CMP-legionaminate biosynthesis I Dole_2029 PWY-7219 adenosine ribonucleotides de novo biosynthesis Dole_2031 PWY-5659 GDP-mannose biosynthesis Dole_2031 PWY-6073 alginate biosynthesis I (algal) Dole_2031 PWY-6082 alginate biosynthesis II (bacterial) Dole_2031 PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) Dole_2033 PWY-1722 formate reduction to 5,10-methylenetetrahydrofolate Dole_2033 PWY-2201 folate transformations I Dole_2033 PWY-3841 folate transformations II Dole_2033 PWY-5030 L-histidine degradation III Dole_2033 PWY-5497 purine nucleobases degradation II (anaerobic) Dole_2033 PWY-6613 tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate Dole_2034 PWY-5154 L-arginine biosynthesis III (via N-acetyl-L-citrulline) Dole_2034 PWY-7400 L-arginine biosynthesis IV (archaebacteria) Dole_2036 PWY-5101 L-isoleucine biosynthesis II Dole_2036 PWY-5103 L-isoleucine biosynthesis III Dole_2036 PWY-5104 L-isoleucine biosynthesis IV Dole_2036 PWY-7111 pyruvate fermentation to isobutanol (engineered) Dole_2037 PWY-5101 L-isoleucine biosynthesis II Dole_2037 PWY-5103 L-isoleucine biosynthesis III Dole_2037 PWY-5104 L-isoleucine biosynthesis IV Dole_2037 PWY-5938 (R)-acetoin biosynthesis I Dole_2037 PWY-5939 (R)-acetoin biosynthesis II Dole_2037 PWY-6389 (S)-acetoin biosynthesis Dole_2037 PWY-7111 pyruvate fermentation to isobutanol (engineered) Dole_2038 PWY-5101 L-isoleucine biosynthesis II Dole_2038 PWY-5103 L-isoleucine biosynthesis III Dole_2038 PWY-5104 L-isoleucine biosynthesis IV Dole_2038 PWY-5938 (R)-acetoin biosynthesis I Dole_2038 PWY-5939 (R)-acetoin biosynthesis II Dole_2038 PWY-6389 (S)-acetoin biosynthesis Dole_2038 PWY-7111 pyruvate fermentation to isobutanol (engineered) Dole_2039 PWY-5101 L-isoleucine biosynthesis II Dole_2039 PWY-5103 L-isoleucine biosynthesis III Dole_2039 PWY-5104 L-isoleucine biosynthesis IV Dole_2039 PWY-7111 pyruvate fermentation to isobutanol (engineered) Dole_2040 PWY-5101 L-isoleucine biosynthesis II Dole_2040 PWY-6871 3-methylbutanol biosynthesis Dole_2041 PWY-6871 3-methylbutanol biosynthesis Dole_2059 PWY-7560 methylerythritol phosphate pathway II Dole_2065 PWY-5508 adenosylcobalamin biosynthesis from cobyrinate a,c-diamide II Dole_2065 PWY-5509 adenosylcobalamin biosynthesis from cobyrinate a,c-diamide I Dole_2065 PWY-6269 adenosylcobalamin salvage from cobinamide II Dole_2076 PWY-6167 flavin biosynthesis II (archaea) Dole_2076 PWY-6168 flavin biosynthesis III (fungi) Dole_2077 PWY-6167 flavin biosynthesis II (archaea) Dole_2077 PWY-6168 flavin biosynthesis III (fungi) Dole_2077 PWY-7539 6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia) Dole_2078 PWY-6167 flavin biosynthesis II (archaea) Dole_2078 PWY-6168 flavin biosynthesis III (fungi) Dole_2078 PWY-7219 adenosine ribonucleotides de novo biosynthesis Dole_2081 PWY-7210 pyrimidine deoxyribonucleotides biosynthesis from CTP Dole_2082 PWY-1622 formaldehyde assimilation I (serine pathway) Dole_2082 PWY-181 photorespiration Dole_2082 PWY-2161 folate polyglutamylation Dole_2082 PWY-2201 folate transformations I Dole_2082 PWY-3661 glycine betaine degradation I Dole_2082 PWY-3661-1 glycine betaine degradation II (mammalian) Dole_2082 PWY-3841 folate transformations II Dole_2082 PWY-5497 purine nucleobases degradation II (anaerobic) Dole_2084 PWY-5367 petroselinate biosynthesis Dole_2084 PWY-5971 palmitate biosynthesis II (bacteria and plants) Dole_2084 PWY-5973 cis-vaccenate biosynthesis Dole_2084 PWY-5989 stearate biosynthesis II (bacteria and plants) Dole_2084 PWY-5994 palmitate biosynthesis I (animals and fungi) Dole_2084 PWY-6113 superpathway of mycolate biosynthesis Dole_2084 PWY-6282 palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate) Dole_2084 PWY-6519 8-amino-7-oxononanoate biosynthesis I Dole_2084 PWY-6951 Dole_2084 Dole_2084 PWY-7053 docosahexaenoate biosynthesis I (lower eukaryotes) Dole_2084 PWY-7388 octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) Dole_2084 PWYG-321 mycolate biosynthesis Dole_2087 PWY-5674 nitrate reduction IV (dissimilatory) Dole_2111 PWY-1042 glycolysis IV (plant cytosol) Dole_2111 PWY-1861 formaldehyde assimilation II (RuMP Cycle) Dole_2111 PWY-5484 glycolysis II (from fructose 6-phosphate) Dole_2111 PWY-7385 1,3-propanediol biosynthesis (engineered) Dole_2113 PWY-6121 5-aminoimidazole ribonucleotide biosynthesis I Dole_2113 PWY-6122 5-aminoimidazole ribonucleotide biosynthesis II Dole_2113 PWY-6277 superpathway of 5-aminoimidazole ribonucleotide biosynthesis Dole_2113 PWY-7282 4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast) Dole_2114 PWY-7205 CMP phosphorylation Dole_2118 PWY-5136 fatty acid β-oxidation II (peroxisome) Dole_2118 PWY-5143 long-chain fatty acid activation Dole_2118 PWY-5353 arachidonate biosynthesis I (lower eukaryotes) Dole_2118 PWY-5885 wax esters biosynthesis II Dole_2118 PWY-5972 stearate biosynthesis I (animals and fungi) Dole_2118 PWY-5995 linoleate biosynthesis I (plants) Dole_2118 PWY-6000 γ-linolenate biosynthesis II (animals) Dole_2118 PWY-6001 linoleate biosynthesis II (animals) Dole_2118 PWY-6803 phosphatidylcholine acyl editing Dole_2118 PWY-6873 long chain fatty acid ester synthesis for microdiesel production Dole_2118 PWY-6920 6-gingerol analog biosynthesis Dole_2118 PWY-6951 Dole_2118 Dole_2118 PWY-7033 alkane biosynthesis II Dole_2118 PWY-7035 (Z)-9-tricosene biosynthesis Dole_2118 PWY-7049 icosapentaenoate biosynthesis II (metazoa) Dole_2118 PWY-7053 docosahexaenoate biosynthesis I (lower eukaryotes) Dole_2118 PWY-7094 fatty acid salvage Dole_2118 PWY-7288 fatty acid β-oxidation (peroxisome, yeast) Dole_2125 PWY-1042 glycolysis IV (plant cytosol) Dole_2125 PWY-2221 Entner-Doudoroff pathway III (semi-phosphorylative) Dole_2125 PWY-5484 glycolysis II (from fructose 6-phosphate) Dole_2125 PWY-5723 Rubisco shunt Dole_2125 PWY-6142 gluconeogenesis II (Methanobacterium thermoautotrophicum) Dole_2125 PWY-6886 1-butanol autotrophic biosynthesis Dole_2125 PWY-6901 superpathway of glucose and xylose degradation Dole_2125 PWY-7003 glycerol degradation to butanol Dole_2125 PWY-7218 photosynthetic 3-hydroxybutanoate biosynthesis (engineered) Dole_2125 PWY-7383 anaerobic energy metabolism (invertebrates, cytosol) Dole_2135 PWY-2941 L-lysine biosynthesis II Dole_2135 PWY-2942 L-lysine biosynthesis III Dole_2135 PWY-5097 L-lysine biosynthesis VI Dole_2144 PWY-7204 pyridoxal 5'-phosphate salvage II (plants) Dole_2144 PWY-7282 4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast) Dole_2147 PWY-7560 methylerythritol phosphate pathway II Dole_2150 PWY-5663 tetrahydrobiopterin biosynthesis I Dole_2150 PWY-5664 tetrahydrobiopterin biosynthesis II Dole_2150 PWY-6147 6-hydroxymethyl-dihydropterin diphosphate biosynthesis I Dole_2150 PWY-6703 preQ0 biosynthesis Dole_2150 PWY-6983 tetrahydrobiopterin biosynthesis III Dole_2150 PWY-7442 drosopterin and aurodrosopterin biosynthesis Dole_2180 PWY-4381 fatty acid biosynthesis initiation I Dole_2180 PWY-5743 3-hydroxypropanoate cycle Dole_2180 PWY-5744 glyoxylate assimilation Dole_2180 PWY-5789 3-hydroxypropanoate/4-hydroxybutanate cycle Dole_2180 PWY-6679 jadomycin biosynthesis Dole_2180 PWY-7388 octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) Dole_2188 PWY-5743 3-hydroxypropanoate cycle Dole_2188 PWY-5789 3-hydroxypropanoate/4-hydroxybutanate cycle Dole_2188 PWY-6728 methylaspartate cycle Dole_2188 PWY-7384 anaerobic energy metabolism (invertebrates, mitochondrial) Dole_2198 PWY-6700 queuosine biosynthesis Dole_2217 PWY-5669 phosphatidylethanolamine biosynthesis I Dole_2218 PWY-5669 phosphatidylethanolamine biosynthesis I Dole_2220 PWY-2941 L-lysine biosynthesis II Dole_2220 PWY-2942 L-lysine biosynthesis III Dole_2220 PWY-5097 L-lysine biosynthesis VI Dole_2220 PWY-5154 L-arginine biosynthesis III (via N-acetyl-L-citrulline) Dole_2220 PWY-6559 spermidine biosynthesis II Dole_2220 PWY-6562 norspermidine biosynthesis Dole_2220 PWY-7153 grixazone biosynthesis Dole_2220 PWY-7400 L-arginine biosynthesis IV (archaebacteria) Dole_2224 PWY-5663 tetrahydrobiopterin biosynthesis I Dole_2224 PWY-5664 tetrahydrobiopterin biosynthesis II Dole_2224 PWY-6147 6-hydroxymethyl-dihydropterin diphosphate biosynthesis I Dole_2224 PWY-6703 preQ0 biosynthesis Dole_2224 PWY-6983 tetrahydrobiopterin biosynthesis III Dole_2224 PWY-7442 drosopterin and aurodrosopterin biosynthesis Dole_2225 PWY-5265 peptidoglycan biosynthesis II (staphylococci) Dole_2225 PWY-6471 peptidoglycan biosynthesis IV (Enterococcus faecium) Dole_2228 PWY-6163 chorismate biosynthesis from 3-dehydroquinate Dole_2228 PWY-6416 quinate degradation II Dole_2228 PWY-6707 gallate biosynthesis Dole_2229 PWY-1861 formaldehyde assimilation II (RuMP Cycle) Dole_2229 PWY-5723 Rubisco shunt Dole_2234 PWY-5523 5,6-dimethylbenzimidazole biosynthesis Dole_2234 PWY-6167 flavin biosynthesis II (archaea) Dole_2234 PWY-6168 flavin biosynthesis III (fungi) Dole_2243 PWY-6823 molybdenum cofactor biosynthesis Dole_2243 PWY-6891 thiazole biosynthesis II (Bacillus) Dole_2243 PWY-6892 thiazole biosynthesis I (E. coli) Dole_2243 PWY-7250 [2Fe-2S] iron-sulfur cluster biosynthesis Dole_2261 PWY-5350 thiosulfate disproportionation III (rhodanese) Dole_2272 PWY-381 nitrate reduction II (assimilatory) Dole_2272 PWY-5675 nitrate reduction V (assimilatory) Dole_2272 PWY-6549 L-glutamine biosynthesis III Dole_2272 PWY-6963 ammonia assimilation cycle I Dole_2272 PWY-6964 ammonia assimilation cycle II Dole_2273 PWY-381 nitrate reduction II (assimilatory) Dole_2273 PWY-5675 nitrate reduction V (assimilatory) Dole_2273 PWY-6549 L-glutamine biosynthesis III Dole_2273 PWY-6963 ammonia assimilation cycle I Dole_2273 PWY-6964 ammonia assimilation cycle II Dole_2282 PWY-6339 syringate degradation Dole_2293 PWY-5939 (R)-acetoin biosynthesis II Dole_2306 PWY-6829 tRNA methylation (yeast) Dole_2306 PWY-7285 methylwyosine biosynthesis Dole_2306 PWY-7286 7-(3-amino-3-carboxypropyl)-wyosine biosynthesis Dole_2323 PWY-1341 phenylacetate degradation II (anaerobic) Dole_2323 PWY-6318 L-phenylalanine degradation IV (mammalian, via side chain) Dole_2330 PWY-2201 folate transformations I Dole_2330 PWY-3841 folate transformations II Dole_2335 PWY-7205 CMP phosphorylation Dole_2360 PWY-6483 ceramide degradation Dole_2360 PWY-7119 sphingolipid recycling and degradation (yeast) Dole_2369 PWY-6123 inosine-5'-phosphate biosynthesis I Dole_2369 PWY-6124 inosine-5'-phosphate biosynthesis II Dole_2369 PWY-7234 inosine-5'-phosphate biosynthesis III Dole_2374 PWY-1622 formaldehyde assimilation I (serine pathway) Dole_2374 PWY-5392 reductive TCA cycle II Dole_2374 PWY-561 superpathway of glyoxylate cycle and fatty acid degradation Dole_2374 PWY-5690 TCA cycle II (plants and fungi) Dole_2374 PWY-5913 TCA cycle VI (obligate autotrophs) Dole_2374 PWY-6728 methylaspartate cycle Dole_2374 PWY-6969 TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase) Dole_2374 PWY-7115 C4 photosynthetic carbon assimilation cycle, NAD-ME type Dole_2374 PWY-7383 anaerobic energy metabolism (invertebrates, cytosol) Dole_2397 PWY-7205 CMP phosphorylation Dole_2398 PWY-7205 CMP phosphorylation Dole_2416 PWY-6823 molybdenum cofactor biosynthesis Dole_2426 PWY-5532 adenosine nucleotides degradation IV Dole_2427 PWY-6890 4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis Dole_2485 PWY-5269 cardiolipin biosynthesis II Dole_2485 PWY-5668 cardiolipin biosynthesis I Dole_2486 PWY-1861 formaldehyde assimilation II (RuMP Cycle) Dole_2486 PWY-5723 Rubisco shunt Dole_2488 PWY-6147 6-hydroxymethyl-dihydropterin diphosphate biosynthesis I Dole_2488 PWY-6148 tetrahydromethanopterin biosynthesis Dole_2488 PWY-6797 6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea) Dole_2488 PWY-7539 6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia) Dole_2490 PWY-4983 L-citrulline-nitric oxide cycle Dole_2490 PWY-4984 urea cycle Dole_2490 PWY-5 canavanine biosynthesis Dole_2490 PWY-5154 L-arginine biosynthesis III (via N-acetyl-L-citrulline) Dole_2490 PWY-7400 L-arginine biosynthesis IV (archaebacteria) Dole_2491 PWY-4983 L-citrulline-nitric oxide cycle Dole_2491 PWY-4984 urea cycle Dole_2491 PWY-5 canavanine biosynthesis Dole_2491 PWY-5154 L-arginine biosynthesis III (via N-acetyl-L-citrulline) Dole_2491 PWY-7400 L-arginine biosynthesis IV (archaebacteria) Dole_2492 PWY-4981 L-proline biosynthesis II (from arginine) Dole_2492 PWY-4984 urea cycle Dole_2492 PWY-7400 L-arginine biosynthesis IV (archaebacteria) Dole_2494 PWY-5154 L-arginine biosynthesis III (via N-acetyl-L-citrulline) Dole_2494 PWY-7400 L-arginine biosynthesis IV (archaebacteria) Dole_2499 PWY-5667 CDP-diacylglycerol biosynthesis I Dole_2499 PWY-5981 CDP-diacylglycerol biosynthesis III Dole_2499 PWY-7411 superpathway of phosphatidate biosynthesis (yeast) Dole_2499 PWY-7417 phospholipid remodeling (phosphatidate, yeast) Dole_2517 PWY-6910 hydroxymethylpyrimidine salvage Dole_2517 PWY-7356 thiamin salvage IV (yeast) Dole_2517 PWY-7357 thiamin formation from pyrithiamine and oxythiamine (yeast) Dole_2521 PWY-3561 choline biosynthesis III Dole_2521 PWY-7039 phosphatidate metabolism, as a signaling molecule Dole_2533 PWY-5188 tetrapyrrole biosynthesis I (from glutamate) Dole_2535 PWY-5921 glutaminyl-tRNAgln biosynthesis via transamidation Dole_2551 PWY-6386 UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing) Dole_2551 PWY-6387 UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing) Dole_2568 PWY-5686 UMP biosynthesis Dole_2570 PWY-7187 pyrimidine deoxyribonucleotides de novo biosynthesis II Dole_2570 PWY-7220 adenosine deoxyribonucleotides de novo biosynthesis II Dole_2570 PWY-7222 guanosine deoxyribonucleotides de novo biosynthesis II Dole_2582 PWY-5083 NAD/NADH phosphorylation and dephosphorylation Dole_2582 PWY-7268 NAD/NADP-NADH/NADPH cytosolic interconversion (yeast) Dole_2582 PWY-7269 NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast) Dole_2583 PWY-3461 L-tyrosine biosynthesis II Dole_2583 PWY-3462 L-phenylalanine biosynthesis II Dole_2583 PWY-6120 L-tyrosine biosynthesis III Dole_2583 PWY-6627 salinosporamide A biosynthesis Dole_2583 PWY-7432 L-phenylalanine biosynthesis III (cytosolic, plants) Dole_2614 PWY-6386 UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing) Dole_2614 PWY-6387 UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing) Dole_2615 PWY-4261 glycerol degradation I Dole_2616 PWY-4261 glycerol degradation I Dole_2616 PWY-6118 glycerol-3-phosphate shuttle Dole_2616 PWY-6952 glycerophosphodiester degradation Dole_2619 PWY-6605 adenine and adenosine salvage II Dole_2619 PWY-6610 adenine and adenosine salvage IV Dole_2625 PWY-6545 pyrimidine deoxyribonucleotides de novo biosynthesis III Dole_2625 PWY-7176 UTP and CTP de novo biosynthesis Dole_2625 PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I Dole_2625 PWY-7187 pyrimidine deoxyribonucleotides de novo biosynthesis II Dole_2625 PWY-7197 pyrimidine deoxyribonucleotide phosphorylation Dole_2625 PWY-7198 pyrimidine deoxyribonucleotides de novo biosynthesis IV Dole_2625 PWY-7205 CMP phosphorylation Dole_2625 PWY-7210 pyrimidine deoxyribonucleotides biosynthesis from CTP Dole_2625 PWY-7220 adenosine deoxyribonucleotides de novo biosynthesis II Dole_2625 PWY-7221 guanosine ribonucleotides de novo biosynthesis Dole_2625 PWY-7222 guanosine deoxyribonucleotides de novo biosynthesis II Dole_2625 PWY-7224 purine deoxyribonucleosides salvage Dole_2625 PWY-7226 guanosine deoxyribonucleotides de novo biosynthesis I Dole_2625 PWY-7227 adenosine deoxyribonucleotides de novo biosynthesis Dole_2652 PWY-6683 sulfate reduction III (assimilatory) Dole_2657 PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type Dole_2657 PWY-6549 L-glutamine biosynthesis III Dole_2657 PWY-7115 C4 photosynthetic carbon assimilation cycle, NAD-ME type Dole_2657 PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type Dole_2663 PWY-5057 L-valine degradation II Dole_2663 PWY-5076 L-leucine degradation III Dole_2663 PWY-5078 L-isoleucine degradation II Dole_2663 PWY-5101 L-isoleucine biosynthesis II Dole_2663 PWY-5103 L-isoleucine biosynthesis III Dole_2663 PWY-5104 L-isoleucine biosynthesis IV Dole_2663 PWY-5108 L-isoleucine biosynthesis V Dole_2667 PWY-2941 L-lysine biosynthesis II Dole_2667 PWY-2942 L-lysine biosynthesis III Dole_2667 PWY-5097 L-lysine biosynthesis VI Dole_2669 PWY-6683 sulfate reduction III (assimilatory) Dole_2670 PWY-6683 sulfate reduction III (assimilatory) Dole_2680 PWY-7221 guanosine ribonucleotides de novo biosynthesis Dole_2745 PWY-6281 L-selenocysteine biosynthesis II (archaea and eukaryotes) Dole_2749 PWY-6386 UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing) Dole_2749 PWY-6387 UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing) Dole_2779 PWY-5097 L-lysine biosynthesis VI Dole_2785 PWY-6386 UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing) Dole_2785 PWY-6387 UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing) Dole_2786 PWY-6386 UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing) Dole_2786 PWY-6387 UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing) Dole_2787 PWY-5265 peptidoglycan biosynthesis II (staphylococci) Dole_2787 PWY-6385 peptidoglycan biosynthesis III (mycobacteria) Dole_2787 PWY-6470 peptidoglycan biosynthesis V (β-lactam resistance) Dole_2787 PWY-6471 peptidoglycan biosynthesis IV (Enterococcus faecium) Dole_2789 PWY-6386 UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing) Dole_2789 PWY-6387 UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing) Dole_2790 PWY-5265 peptidoglycan biosynthesis II (staphylococci) Dole_2790 PWY-6470 peptidoglycan biosynthesis V (β-lactam resistance) Dole_2790 PWY-6471 peptidoglycan biosynthesis IV (Enterococcus faecium) Dole_2791 PWY-6386 UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing) Dole_2791 PWY-6387 UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing) Dole_2816 PWY-7560 methylerythritol phosphate pathway II Dole_2841 PWY-5971 palmitate biosynthesis II (bacteria and plants) Dole_2841 PWY-5973 cis-vaccenate biosynthesis Dole_2841 PWY-5989 stearate biosynthesis II (bacteria and plants) Dole_2841 PWY-5994 palmitate biosynthesis I (animals and fungi) Dole_2841 PWY-6113 superpathway of mycolate biosynthesis Dole_2841 PWY-6282 palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate) Dole_2841 PWY-6519 8-amino-7-oxononanoate biosynthesis I Dole_2841 PWY-7388 octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) Dole_2841 PWYG-321 mycolate biosynthesis Dole_2850 PWY-5041 S-adenosyl-L-methionine cycle II Dole_2850 PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis Dole_2859 PWY-6823 molybdenum cofactor biosynthesis Dole_2883 PWY-5350 thiosulfate disproportionation III (rhodanese) Dole_2897 PWY-6803 phosphatidylcholine acyl editing Dole_2897 PWY-7409 phospholipid remodeling (phosphatidylethanolamine, yeast) Dole_2897 PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) Dole_2897 PWY-7417 phospholipid remodeling (phosphatidate, yeast) Dole_2957 PWY-5531 chlorophyllide a biosynthesis II (anaerobic) Dole_2957 PWY-7159 chlorophyllide a biosynthesis III (aerobic, light independent) Dole_2962 PWY-2201 folate transformations I Dole_2962 PWY-3841 folate transformations II Dole_2963 PWY-5531 chlorophyllide a biosynthesis II (anaerobic) Dole_2963 PWY-7159 chlorophyllide a biosynthesis III (aerobic, light independent) Dole_2975 PWY-4261 glycerol degradation I Dole_3005 PWY-5674 nitrate reduction IV (dissimilatory) Dole_3028 PWY-6545 pyrimidine deoxyribonucleotides de novo biosynthesis III Dole_3028 PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I Dole_3028 PWY-7187 pyrimidine deoxyribonucleotides de novo biosynthesis II Dole_3028 PWY-7206 pyrimidine deoxyribonucleotides dephosphorylation Dole_3045 PWY-6614 tetrahydrofolate biosynthesis Dole_3046 PWY-3961 phosphopantothenate biosynthesis II Dole_3059 PWY-1722 formate reduction to 5,10-methylenetetrahydrofolate Dole_3059 PWY-2161 folate polyglutamylation Dole_3059 PWY-2201 folate transformations I Dole_3059 PWY-3841 folate transformations II Dole_3062 PWY-5188 tetrapyrrole biosynthesis I (from glutamate) Dole_3062 PWY-5189 tetrapyrrole biosynthesis II (from glycine) Dole_3062 PWY-5194 siroheme biosynthesis Dole_3062 PWY-7377 cob(II)yrinate a,c-diamide biosynthesis I (early cobalt insertion) Dole_3063 PWY-5392 reductive TCA cycle II Dole_3063 PWY-5483 pyruvate fermentation to acetate III Dole_3063 PWY-5535 acetate formation from acetyl-CoA II Dole_3063 PWY-5537 pyruvate fermentation to acetate V Dole_3063 PWY-5538 pyruvate fermentation to acetate VI Dole_3063 PWY-5690 TCA cycle II (plants and fungi) Dole_3063 PWY-5913 TCA cycle VI (obligate autotrophs) Dole_3063 PWY-6728 methylaspartate cycle Dole_3063 PWY-6969 TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase) Dole_3063 PWY-7384 anaerobic energy metabolism (invertebrates, mitochondrial) Dole_3064 PWY-6012 acyl carrier protein metabolism I Dole_3064 PWY-6012-1 acyl carrier protein metabolism II (mammalian) Dole_3101 PWY-1361 benzoyl-CoA degradation I (aerobic) Dole_3101 PWY-5109 2-methylbutanoate biosynthesis Dole_3101 PWY-5136 fatty acid β-oxidation II (peroxisome) Dole_3101 PWY-5138 unsaturated, even numbered fatty acid β-oxidation Dole_3101 PWY-5177 glutaryl-CoA degradation Dole_3101 PWY-5789 3-hydroxypropanoate/4-hydroxybutanate cycle Dole_3101 PWY-6435 4-hydroxybenzoate biosynthesis V Dole_3101 PWY-6583 pyruvate fermentation to butanol I Dole_3101 PWY-6863 pyruvate fermentation to hexanol Dole_3101 PWY-6883 pyruvate fermentation to butanol II Dole_3101 PWY-6944 androstenedione degradation Dole_3101 PWY-6945 cholesterol degradation to androstenedione I (cholesterol oxidase) Dole_3101 PWY-6946 cholesterol degradation to androstenedione II (cholesterol dehydrogenase) Dole_3101 PWY-7007 methyl ketone biosynthesis Dole_3101 PWY-7046 4-coumarate degradation (anaerobic) Dole_3101 PWY-7094 fatty acid salvage Dole_3101 PWY-7216 (R)- and (S)-3-hydroxybutanoate biosynthesis Dole_3101 PWY-735 jasmonic acid biosynthesis Dole_3101 PWY-7401 crotonate fermentation (to acetate and cyclohexane carboxylate) Dole_3109 PWY-6163 chorismate biosynthesis from 3-dehydroquinate Dole_3110 PWY-6163 chorismate biosynthesis from 3-dehydroquinate Dole_3160 PWY-2941 L-lysine biosynthesis II Dole_3160 PWY-5097 L-lysine biosynthesis VI Dole_3174 PWY-6823 molybdenum cofactor biosynthesis Dole_3175 PWY-5964 guanylyl molybdenum cofactor biosynthesis Dole_3177 PWY-5686 UMP biosynthesis Dole_3185 PWY-5372 carbon tetrachloride degradation II Dole_3185 PWY-6780 hydrogen production VI Dole_3187 PWY-6160 3-dehydroquinate biosynthesis II (archaea) Dole_3195 PWY-7183 pyrimidine nucleobases salvage I Dole_3201 PWY-6749 CMP-legionaminate biosynthesis I Dole_3236 PWY-5194 siroheme biosynthesis Dole_3236 PWY-7377 cob(II)yrinate a,c-diamide biosynthesis I (early cobalt insertion) Dole_3238 PWY-5188 tetrapyrrole biosynthesis I (from glutamate) Dole_3240 PWY-6834 spermidine biosynthesis III Dole_3249 PWY-6281 L-selenocysteine biosynthesis II (archaea and eukaryotes)