Dret_0006	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
Dret_0006	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Dret_0006	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
Dret_0006	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
Dret_0006	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Dret_0006	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Dret_0006	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
Dret_0006	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
Dret_0009	PWY-5101	L-isoleucine biosynthesis II
Dret_0009	PWY-5103	L-isoleucine biosynthesis III
Dret_0009	PWY-5104	L-isoleucine biosynthesis IV
Dret_0009	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Dret_0011	PWY-6823	molybdenum cofactor biosynthesis
Dret_0035	PWY-2622	trehalose biosynthesis IV
Dret_0036	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
Dret_0036	PWY-622	starch biosynthesis
Dret_0037	PWY-2661	trehalose biosynthesis V
Dret_0039	PWY-2661	trehalose biosynthesis V
Dret_0041	PWY-5941	glycogen degradation II (eukaryotic)
Dret_0041	PWY-6724	starch degradation II
Dret_0041	PWY-6737	starch degradation V
Dret_0041	PWY-7238	sucrose biosynthesis II
Dret_0061	PWY-5350	thiosulfate disproportionation III (rhodanese)
Dret_0068	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
Dret_0068	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Dret_0068	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Dret_0075	PWY-5667	CDP-diacylglycerol biosynthesis I
Dret_0075	PWY-5981	CDP-diacylglycerol biosynthesis III
Dret_0085	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
Dret_0088	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Dret_0093	PWY-6700	queuosine biosynthesis
Dret_0100	PWY-6823	molybdenum cofactor biosynthesis
Dret_0100	PWY-6891	thiazole biosynthesis II (Bacillus)
Dret_0100	PWY-6892	thiazole biosynthesis I (E. coli)
Dret_0100	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
Dret_0114	PWY-6160	3-dehydroquinate biosynthesis II (archaea)
Dret_0115	PWY-6160	3-dehydroquinate biosynthesis II (archaea)
Dret_0116	PWY-3461	L-tyrosine biosynthesis II
Dret_0116	PWY-3462	L-phenylalanine biosynthesis II
Dret_0116	PWY-6120	L-tyrosine biosynthesis III
Dret_0116	PWY-6627	salinosporamide A biosynthesis
Dret_0116	PWY-7432	L-phenylalanine biosynthesis III (cytosolic, plants)
Dret_0117	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Dret_0118	PWY-7303	3-dimethylallyl-4-hydroxybenzoate biosynthesis
Dret_0119	PWY-5958	acridone alkaloid biosynthesis
Dret_0119	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
Dret_0119	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
Dret_0120	PWY-5958	acridone alkaloid biosynthesis
Dret_0120	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
Dret_0120	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
Dret_0129	PWY-3722	glycine betaine biosynthesis II (Gram-positive bacteria)
Dret_0129	PWY-7494	choline degradation IV
Dret_0130	PWY-3722	glycine betaine biosynthesis II (Gram-positive bacteria)
Dret_0130	PWY-7494	choline degradation IV
Dret_0143	PWY-6749	CMP-legionaminate biosynthesis I
Dret_0144	PWY-7206	pyrimidine deoxyribonucleotides dephosphorylation
Dret_0149	PWY-5198	factor 420 biosynthesis
Dret_0149	PWY-7371	1,4-dihydroxy-6-naphthoate biosynthesis II
Dret_0149	PWY-7374	1,4-dihydroxy-6-naphthoate biosynthesis I
Dret_0153	PWY-3221	dTDP-L-rhamnose biosynthesis II
Dret_0153	PWY-6808	dTDP-D-forosamine biosynthesis
Dret_0153	PWY-6942	dTDP-D-desosamine biosynthesis
Dret_0153	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
Dret_0153	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
Dret_0153	PWY-6974	dTDP-L-olivose biosynthesis
Dret_0153	PWY-6976	dTDP-L-mycarose biosynthesis
Dret_0153	PWY-7104	dTDP-L-megosamine biosynthesis
Dret_0153	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
Dret_0153	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
Dret_0153	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
Dret_0153	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
Dret_0153	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
Dret_0153	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
Dret_0153	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
Dret_0153	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
Dret_0160	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
Dret_0167	PWY-5674	nitrate reduction IV (dissimilatory)
Dret_0171	PWY-5022	4-aminobutanoate degradation V
Dret_0171	PWY-6728	methylaspartate cycle
Dret_0171	PWY-7126	ethylene biosynthesis IV
Dret_0209	PWY-5663	tetrahydrobiopterin biosynthesis I
Dret_0209	PWY-5664	tetrahydrobiopterin biosynthesis II
Dret_0209	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
Dret_0209	PWY-6703	preQ<sub>0</sub> biosynthesis
Dret_0209	PWY-6983	tetrahydrobiopterin biosynthesis III
Dret_0209	PWY-7442	drosopterin and aurodrosopterin biosynthesis
Dret_0218	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
Dret_0218	PWY-2201	folate transformations I
Dret_0218	PWY-3841	folate transformations II
Dret_0218	PWY-5030	L-histidine degradation III
Dret_0218	PWY-5497	purine nucleobases degradation II (anaerobic)
Dret_0218	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
Dret_0220	PWY-6123	inosine-5'-phosphate biosynthesis I
Dret_0220	PWY-7234	inosine-5'-phosphate biosynthesis III
Dret_0221	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Dret_0221	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
Dret_0221	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
Dret_0244	PWY-6683	sulfate reduction III (assimilatory)
Dret_0245	PWY-6683	sulfate reduction III (assimilatory)
Dret_0252	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Dret_0252	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
Dret_0252	PWY-5194	siroheme biosynthesis
Dret_0252	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
Dret_0253	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Dret_0253	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
Dret_0269	PWY-5659	GDP-mannose biosynthesis
Dret_0269	PWY-6073	alginate biosynthesis I (algal)
Dret_0269	PWY-6082	alginate biosynthesis II (bacterial)
Dret_0269	PWY-882	L-ascorbate biosynthesis I (L-galactose pathway)
Dret_0278	PWY-5964	guanylyl molybdenum cofactor biosynthesis
Dret_0293	PWY-5686	UMP biosynthesis
Dret_0294	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
Dret_0300	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
Dret_0307	PWY-3221	dTDP-L-rhamnose biosynthesis II
Dret_0307	PWY-6808	dTDP-D-forosamine biosynthesis
Dret_0307	PWY-6942	dTDP-D-desosamine biosynthesis
Dret_0307	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
Dret_0307	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
Dret_0307	PWY-6974	dTDP-L-olivose biosynthesis
Dret_0307	PWY-6976	dTDP-L-mycarose biosynthesis
Dret_0307	PWY-7104	dTDP-L-megosamine biosynthesis
Dret_0307	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
Dret_0307	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
Dret_0307	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
Dret_0307	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
Dret_0307	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
Dret_0307	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
Dret_0307	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
Dret_0307	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
Dret_0313	PWY-101	photosynthesis light reactions
Dret_0313	PWY-7230	ubiquinol-6 biosynthesis from 4-aminobenzoate (eukaryotic)
Dret_0320	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Dret_0320	PWY-5686	UMP biosynthesis
Dret_0320	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Dret_0321	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Dret_0321	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
Dret_0321	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
Dret_0321	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
Dret_0331	PWY-6728	methylaspartate cycle
Dret_0331	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Dret_0331	PWY-7118	chitin degradation to ethanol
Dret_0331	PWY-7294	xylose degradation IV
Dret_0331	PWY-7295	L-arabinose degradation IV
Dret_0340	PWY-1042	glycolysis IV (plant cytosol)
Dret_0340	PWY-5484	glycolysis II (from fructose 6-phosphate)
Dret_0340	PWY-6901	superpathway of glucose and xylose degradation
Dret_0340	PWY-7003	glycerol degradation to butanol
Dret_0345	PWY-1361	benzoyl-CoA degradation I (aerobic)
Dret_0345	PWY-5109	2-methylbutanoate biosynthesis
Dret_0345	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
Dret_0345	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
Dret_0345	PWY-5177	glutaryl-CoA degradation
Dret_0345	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Dret_0345	PWY-6435	4-hydroxybenzoate biosynthesis V
Dret_0345	PWY-6583	pyruvate fermentation to butanol I
Dret_0345	PWY-6863	pyruvate fermentation to hexanol
Dret_0345	PWY-6883	pyruvate fermentation to butanol II
Dret_0345	PWY-6944	androstenedione degradation
Dret_0345	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
Dret_0345	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
Dret_0345	PWY-7007	methyl ketone biosynthesis
Dret_0345	PWY-7046	4-coumarate degradation (anaerobic)
Dret_0345	PWY-7094	fatty acid salvage
Dret_0345	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
Dret_0345	PWY-735	jasmonic acid biosynthesis
Dret_0345	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
Dret_0367	PWY-5659	GDP-mannose biosynthesis
Dret_0367	PWY-6073	alginate biosynthesis I (algal)
Dret_0367	PWY-6082	alginate biosynthesis II (bacterial)
Dret_0367	PWY-882	L-ascorbate biosynthesis I (L-galactose pathway)
Dret_0392	PWY-6986	alginate degradation
Dret_0395	PWY-7335	UDP-<i>N</i>-acetyl-&alpha;-D-mannosaminouronate biosynthesis
Dret_0401	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
Dret_0401	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
Dret_0401	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
Dret_0451	PWY-1042	glycolysis IV (plant cytosol)
Dret_0451	PWY-1622	formaldehyde assimilation I (serine pathway)
Dret_0451	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
Dret_0451	PWY-5484	glycolysis II (from fructose 6-phosphate)
Dret_0451	PWY-5723	Rubisco shunt
Dret_0451	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Dret_0451	PWY-6886	1-butanol autotrophic biosynthesis
Dret_0451	PWY-6901	superpathway of glucose and xylose degradation
Dret_0451	PWY-7003	glycerol degradation to butanol
Dret_0451	PWY-7124	ethylene biosynthesis V (engineered)
Dret_0451	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
Dret_0452	PWY-3961	phosphopantothenate biosynthesis II
Dret_0454	PWY-5674	nitrate reduction IV (dissimilatory)
Dret_0459	PWY-6829	tRNA methylation (yeast)
Dret_0485	PWY-6749	CMP-legionaminate biosynthesis I
Dret_0499	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
Dret_0499	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
Dret_0499	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
Dret_0503	PWY-4361	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation
Dret_0503	PWY-7174	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation II
Dret_0505	PWY-5057	L-valine degradation II
Dret_0505	PWY-5076	L-leucine degradation III
Dret_0505	PWY-5078	L-isoleucine degradation II
Dret_0505	PWY-5101	L-isoleucine biosynthesis II
Dret_0505	PWY-5103	L-isoleucine biosynthesis III
Dret_0505	PWY-5104	L-isoleucine biosynthesis IV
Dret_0505	PWY-5108	L-isoleucine biosynthesis V
Dret_0521	PWY-6700	queuosine biosynthesis
Dret_0523	PWY-2201	folate transformations I
Dret_0523	PWY-5497	purine nucleobases degradation II (anaerobic)
Dret_0538	PWY-7560	methylerythritol phosphate pathway II
Dret_0541	PWY-5663	tetrahydrobiopterin biosynthesis I
Dret_0541	PWY-5664	tetrahydrobiopterin biosynthesis II
Dret_0541	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
Dret_0541	PWY-6703	preQ<sub>0</sub> biosynthesis
Dret_0541	PWY-6983	tetrahydrobiopterin biosynthesis III
Dret_0541	PWY-7442	drosopterin and aurodrosopterin biosynthesis
Dret_0545	PWY-5392	reductive TCA cycle II
Dret_0545	PWY-5537	pyruvate fermentation to acetate V
Dret_0545	PWY-5538	pyruvate fermentation to acetate VI
Dret_0545	PWY-5690	TCA cycle II (plants and fungi)
Dret_0545	PWY-5913	TCA cycle VI (obligate autotrophs)
Dret_0545	PWY-6728	methylaspartate cycle
Dret_0545	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Dret_0545	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Dret_0550	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Dret_0550	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Dret_0572	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Dret_0609	PWY-6143	CMP-pseudaminate biosynthesis
Dret_0609	PWY-7330	UDP-<i>N</i>-acetyl-&beta;-L-fucosamine biosynthesis
Dret_0609	PWY-7331	UDP-<i>N</i>-acetyl-&beta;-L-quinovosamine biosynthesis
Dret_0609	PWY-7332	superpathway of UDP-<I>N</i>-acetylglucosamine-derived O-antigen building blocks biosynthesis
Dret_0616	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
Dret_0616	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
Dret_0620	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
Dret_0620	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
Dret_0620	PWY-6143	CMP-pseudaminate biosynthesis
Dret_0683	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Dret_0686	PWY-6478	GDP-D-<i>glycero</i>-&alpha;-D-<i>manno</i>-heptose biosynthesis
Dret_0688	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Dret_0688	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
Dret_0689	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
Dret_0689	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
Dret_0690	PWY-5750	itaconate biosynthesis
Dret_0690	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Dret_0690	PWY-6146	<i>Methanobacterium thermoautotrophicum</i> biosynthetic metabolism
Dret_0727	PWY-6891	thiazole biosynthesis II (Bacillus)
Dret_0727	PWY-6892	thiazole biosynthesis I (E. coli)
Dret_0728	PWY-6892	thiazole biosynthesis I (E. coli)
Dret_0728	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
Dret_0730	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
Dret_0730	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
Dret_0730	PWY-6897	thiamin salvage II
Dret_0730	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
Dret_0730	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
Dret_0730	PWY-7353	4-methyl-5(&beta;-hydroxyethyl)thiazole salvage (yeast)
Dret_0730	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
Dret_0732	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Dret_0732	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
Dret_0732	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
Dret_0742	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Dret_0742	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Dret_0743	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
Dret_0743	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
Dret_0743	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
Dret_0744	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Dret_0744	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Dret_0746	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
Dret_0746	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
Dret_0746	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
Dret_0746	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
Dret_0747	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Dret_0747	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Dret_0748	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Dret_0748	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Dret_0759	PWY-2161	folate polyglutamylation
Dret_0763	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Dret_0763	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Dret_0773	PWY-1622	formaldehyde assimilation I (serine pathway)
Dret_0773	PWY-5484	glycolysis II (from fructose 6-phosphate)
Dret_0782	PWY-5381	pyridine nucleotide cycling (plants)
Dret_0782	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
Dret_0803	PWY-2941	L-lysine biosynthesis II
Dret_0803	PWY-2942	L-lysine biosynthesis III
Dret_0803	PWY-5097	L-lysine biosynthesis VI
Dret_0814	PWY-622	starch biosynthesis
Dret_0830	PWY-6936	seleno-amino acid biosynthesis
Dret_0838	PWY-7560	methylerythritol phosphate pathway II
Dret_0843	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Dret_0850	PWY-5484	glycolysis II (from fructose 6-phosphate)
Dret_0851	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Dret_0851	PWY-5723	Rubisco shunt
Dret_0851	PWY-6891	thiazole biosynthesis II (Bacillus)
Dret_0851	PWY-6892	thiazole biosynthesis I (E. coli)
Dret_0851	PWY-6901	superpathway of glucose and xylose degradation
Dret_0851	PWY-7560	methylerythritol phosphate pathway II
Dret_0862	PWY-6599	guanine and guanosine salvage II
Dret_0862	PWY-6609	adenine and adenosine salvage III
Dret_0862	PWY-6610	adenine and adenosine salvage IV
Dret_0862	PWY-6620	guanine and guanosine salvage
Dret_0881	PWY-6984	lipoate salvage II
Dret_0881	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
Dret_0881	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
Dret_0953	PWY-4202	arsenate detoxification I (glutaredoxin)
Dret_0965	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
Dret_0988	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
Dret_0988	PWY-6596	adenosine nucleotides degradation I
Dret_0988	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
Dret_0989	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
Dret_0997	PWY-7183	pyrimidine nucleobases salvage I
Dret_1007	PWY-5198	factor 420 biosynthesis
Dret_1013	PWY-5155	&beta;-alanine biosynthesis III
Dret_1014	PWY-6654	phosphopantothenate biosynthesis III
Dret_1033	PWY-1281	sulfoacetaldehyde degradation I
Dret_1033	PWY-5482	pyruvate fermentation to acetate II
Dret_1033	PWY-5485	pyruvate fermentation to acetate IV
Dret_1033	PWY-5497	purine nucleobases degradation II (anaerobic)
Dret_1033	PWY-6637	sulfolactate degradation II
Dret_1034	PWY-5482	pyruvate fermentation to acetate II
Dret_1034	PWY-5485	pyruvate fermentation to acetate IV
Dret_1034	PWY-5497	purine nucleobases degradation II (anaerobic)
Dret_1035	PWY-1281	sulfoacetaldehyde degradation I
Dret_1035	PWY-5482	pyruvate fermentation to acetate II
Dret_1035	PWY-5485	pyruvate fermentation to acetate IV
Dret_1035	PWY-5497	purine nucleobases degradation II (anaerobic)
Dret_1035	PWY-6637	sulfolactate degradation II
Dret_1038	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Dret_1038	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Dret_1047	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
Dret_1048	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
Dret_1066	PWY-3781	aerobic respiration I (cytochrome c)
Dret_1066	PWY-4302	aerobic respiration III (alternative oxidase pathway)
Dret_1066	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
Dret_1066	PWY-5690	TCA cycle II (plants and fungi)
Dret_1066	PWY-6728	methylaspartate cycle
Dret_1066	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Dret_1066	PWY-7254	TCA cycle VII (acetate-producers)
Dret_1066	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Dret_1067	PWY-3781	aerobic respiration I (cytochrome c)
Dret_1067	PWY-4302	aerobic respiration III (alternative oxidase pathway)
Dret_1067	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
Dret_1067	PWY-5690	TCA cycle II (plants and fungi)
Dret_1067	PWY-6728	methylaspartate cycle
Dret_1067	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Dret_1067	PWY-7254	TCA cycle VII (acetate-producers)
Dret_1067	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Dret_1071	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Dret_1071	PWY-5686	UMP biosynthesis
Dret_1071	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Dret_1072	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
Dret_1072	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
Dret_1074	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Dret_1074	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Dret_1078	PWY-7560	methylerythritol phosphate pathway II
Dret_1100	PWY-7396	butanol and isobutanol biosynthesis (engineered)
Dret_1105	PWY-2201	folate transformations I
Dret_1105	PWY-3841	folate transformations II
Dret_1106	PWY-2941	L-lysine biosynthesis II
Dret_1106	PWY-2942	L-lysine biosynthesis III
Dret_1106	PWY-5097	L-lysine biosynthesis VI
Dret_1106	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Dret_1106	PWY-6559	spermidine biosynthesis II
Dret_1106	PWY-6562	norspermidine biosynthesis
Dret_1106	PWY-7153	grixazone biosynthesis
Dret_1106	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Dret_1111	PWY-6123	inosine-5'-phosphate biosynthesis I
Dret_1111	PWY-6124	inosine-5'-phosphate biosynthesis II
Dret_1111	PWY-7234	inosine-5'-phosphate biosynthesis III
Dret_1119	PWY-4202	arsenate detoxification I (glutaredoxin)
Dret_1119	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
Dret_1119	PWY-6608	guanosine nucleotides degradation III
Dret_1119	PWY-6609	adenine and adenosine salvage III
Dret_1119	PWY-6611	adenine and adenosine salvage V
Dret_1119	PWY-6620	guanine and guanosine salvage
Dret_1119	PWY-6627	salinosporamide A biosynthesis
Dret_1119	PWY-6644	fluoroacetate and fluorothreonine biosynthesis
Dret_1119	PWY-7179	purine deoxyribonucleosides degradation I
Dret_1119	PWY-7179-1	purine deoxyribonucleosides degradation
Dret_1121	PWY-4381	fatty acid biosynthesis initiation I
Dret_1121	PWY-5743	3-hydroxypropanoate cycle
Dret_1121	PWY-5744	glyoxylate assimilation
Dret_1121	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Dret_1121	PWY-6679	jadomycin biosynthesis
Dret_1121	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Dret_1131	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Dret_1131	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Dret_1139	PWY-1341	phenylacetate degradation II (anaerobic)
Dret_1139	PWY-6318	L-phenylalanine degradation IV (mammalian, via side chain)
Dret_1141	PWY-1042	glycolysis IV (plant cytosol)
Dret_1141	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
Dret_1141	PWY-5484	glycolysis II (from fructose 6-phosphate)
Dret_1141	PWY-5723	Rubisco shunt
Dret_1141	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Dret_1141	PWY-6886	1-butanol autotrophic biosynthesis
Dret_1141	PWY-6901	superpathway of glucose and xylose degradation
Dret_1141	PWY-7003	glycerol degradation to butanol
Dret_1141	PWY-7124	ethylene biosynthesis V (engineered)
Dret_1141	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
Dret_1145	PWY-6826	phosphatidylcholine biosynthesis VI
Dret_1234	PWY-5372	carbon tetrachloride degradation II
Dret_1234	PWY-6780	hydrogen production VI
Dret_1236	PWY-5506	methanol oxidation to formaldehyde IV
Dret_1248	PWY-5674	nitrate reduction IV (dissimilatory)
Dret_1276	PWY-6683	sulfate reduction III (assimilatory)
Dret_1278	PWY-6683	sulfate reduction III (assimilatory)
Dret_1300	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Dret_1300	PWY-6416	quinate degradation II
Dret_1300	PWY-6707	gallate biosynthesis
Dret_1308	PWY-5350	thiosulfate disproportionation III (rhodanese)
Dret_1313	PWY-40	putrescine biosynthesis I
Dret_1313	PWY-6305	putrescine biosynthesis IV
Dret_1314	PWY-40	putrescine biosynthesis I
Dret_1314	PWY-43	putrescine biosynthesis II
Dret_1314	PWY-6305	putrescine biosynthesis IV
Dret_1314	PWY-6834	spermidine biosynthesis III
Dret_1317	PWY-4381	fatty acid biosynthesis initiation I
Dret_1317	PWY-6799	fatty acid biosynthesis (plant mitochondria)
Dret_1317	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Dret_1324	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
Dret_1324	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
Dret_1330	PWY-2723	trehalose degradation V
Dret_1330	PWY-3801	sucrose degradation II (sucrose synthase)
Dret_1330	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
Dret_1330	PWY-5661	GDP-glucose biosynthesis
Dret_1330	PWY-5661-1	Dret_1330|Dret_1330|YP_003198196.1|GeneID:8419159
Dret_1330	PWY-5940	streptomycin biosynthesis
Dret_1330	PWY-5941	glycogen degradation II (eukaryotic)
Dret_1330	PWY-622	starch biosynthesis
Dret_1330	PWY-6731	starch degradation III
Dret_1330	PWY-6737	starch degradation V
Dret_1330	PWY-6749	CMP-legionaminate biosynthesis I
Dret_1330	PWY-7238	sucrose biosynthesis II
Dret_1330	PWY-7343	UDP-glucose biosynthesis
Dret_1337	PWY-2941	L-lysine biosynthesis II
Dret_1337	PWY-2942	L-lysine biosynthesis III
Dret_1337	PWY-5097	L-lysine biosynthesis VI
Dret_1348	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
Dret_1348	PWY-6148	tetrahydromethanopterin biosynthesis
Dret_1348	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
Dret_1348	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
Dret_1350	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Dret_1350	PWY-5723	Rubisco shunt
Dret_1351	PWY-5097	L-lysine biosynthesis VI
Dret_1371	PWY-5316	nicotine biosynthesis
Dret_1371	PWY-5381	pyridine nucleotide cycling (plants)
Dret_1371	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
Dret_1371	PWY-7342	superpathway of nicotine biosynthesis
Dret_1372	PWY-5316	nicotine biosynthesis
Dret_1372	PWY-7342	superpathway of nicotine biosynthesis
Dret_1373	PWY-5316	nicotine biosynthesis
Dret_1373	PWY-7342	superpathway of nicotine biosynthesis
Dret_1384	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Dret_1385	PWY-6936	seleno-amino acid biosynthesis
Dret_1388	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Dret_1397	PWY-1042	glycolysis IV (plant cytosol)
Dret_1397	PWY-5484	glycolysis II (from fructose 6-phosphate)
Dret_1397	PWY-6901	superpathway of glucose and xylose degradation
Dret_1397	PWY-7003	glycerol degradation to butanol
Dret_1398	PWY-1042	glycolysis IV (plant cytosol)
Dret_1398	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Dret_1398	PWY-5484	glycolysis II (from fructose 6-phosphate)
Dret_1398	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Dret_1398	PWY-7385	1,3-propanediol biosynthesis (engineered)
Dret_1399	PWY-5381	pyridine nucleotide cycling (plants)
Dret_1399	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
Dret_1399	PWY-6596	adenosine nucleotides degradation I
Dret_1399	PWY-6606	guanosine nucleotides degradation II
Dret_1399	PWY-6607	guanosine nucleotides degradation I
Dret_1399	PWY-6608	guanosine nucleotides degradation III
Dret_1399	PWY-7185	UTP and CTP dephosphorylation I
Dret_1405	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
Dret_1405	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Dret_1405	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
Dret_1405	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
Dret_1405	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
Dret_1405	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
Dret_1409	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Dret_1414	PWY-4381	fatty acid biosynthesis initiation I
Dret_1415	PWY-5367	petroselinate biosynthesis
Dret_1415	PWY-5971	palmitate biosynthesis II (bacteria and plants)
Dret_1415	PWY-5973	<i>cis</i>-vaccenate biosynthesis
Dret_1415	PWY-5989	stearate biosynthesis II (bacteria and plants)
Dret_1415	PWY-5994	palmitate biosynthesis I (animals and fungi)
Dret_1415	PWY-6113	superpathway of mycolate biosynthesis
Dret_1415	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
Dret_1415	PWY-6519	8-amino-7-oxononanoate biosynthesis I
Dret_1415	PWY-6951	Dret_1415|Dret_1415|YP_003198280.1|GeneID:8419244
Dret_1415	PWY-7053	docosahexaenoate biosynthesis I (lower eukaryotes)
Dret_1415	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Dret_1415	PWYG-321	mycolate biosynthesis
Dret_1418	PWY-1622	formaldehyde assimilation I (serine pathway)
Dret_1418	PWY-181	photorespiration
Dret_1418	PWY-2161	folate polyglutamylation
Dret_1418	PWY-2201	folate transformations I
Dret_1418	PWY-3661	glycine betaine degradation I
Dret_1418	PWY-3661-1	glycine betaine degradation II (mammalian)
Dret_1418	PWY-3841	folate transformations II
Dret_1418	PWY-5497	purine nucleobases degradation II (anaerobic)
Dret_1419	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
Dret_1421	PWY-6167	flavin biosynthesis II (archaea)
Dret_1421	PWY-6168	flavin biosynthesis III (fungi)
Dret_1421	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Dret_1422	PWY-6167	flavin biosynthesis II (archaea)
Dret_1422	PWY-6168	flavin biosynthesis III (fungi)
Dret_1422	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
Dret_1423	PWY-6167	flavin biosynthesis II (archaea)
Dret_1423	PWY-6168	flavin biosynthesis III (fungi)
Dret_1451	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Dret_1451	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Dret_1455	PWY-6785	hydrogen production VIII
Dret_1459	PWY-6871	3-methylbutanol biosynthesis
Dret_1460	PWY-5669	phosphatidylethanolamine biosynthesis I
Dret_1461	PWY-5669	phosphatidylethanolamine biosynthesis I
Dret_1463	PWY-5194	siroheme biosynthesis
Dret_1463	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
Dret_1465	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Dret_1484	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
Dret_1517	PWY-7456	mannan degradation
Dret_1549	PWY-1042	glycolysis IV (plant cytosol)
Dret_1549	PWY-5484	glycolysis II (from fructose 6-phosphate)
Dret_1549	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Dret_1549	PWY-7003	glycerol degradation to butanol
Dret_1551	PWY-1042	glycolysis IV (plant cytosol)
Dret_1551	PWY-5484	glycolysis II (from fructose 6-phosphate)
Dret_1551	PWY-6886	1-butanol autotrophic biosynthesis
Dret_1551	PWY-6901	superpathway of glucose and xylose degradation
Dret_1551	PWY-7003	glycerol degradation to butanol
Dret_1554	PWY-2301	<i>myo</i>-inositol biosynthesis
Dret_1554	PWY-4702	phytate degradation I
Dret_1554	PWY-6363	D-<i>myo</i>-inositol (1,4,5)-trisphosphate degradation
Dret_1572	PWY-3801	sucrose degradation II (sucrose synthase)
Dret_1572	PWY-6527	stachyose degradation
Dret_1572	PWY-6981	chitin biosynthesis
Dret_1572	PWY-7238	sucrose biosynthesis II
Dret_1572	PWY-7343	UDP-glucose biosynthesis
Dret_1573	PWY-3821	galactose degradation III
Dret_1573	PWY-6317	galactose degradation I (Leloir pathway)
Dret_1573	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
Dret_1573	PWY-6527	stachyose degradation
Dret_1573	PWY-7328	superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
Dret_1573	PWY-7344	UDP-D-galactose biosynthesis
Dret_1582	PWY-5269	cardiolipin biosynthesis II
Dret_1582	PWY-5668	cardiolipin biosynthesis I
Dret_1592	PWY-5340	sulfate activation for sulfonation
Dret_1596	PWY-7310	D-glucosaminate degradation
Dret_1605	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
Dret_1605	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
Dret_1606	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
Dret_1606	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
Dret_1607	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
Dret_1607	PWY-7177	UTP and CTP dephosphorylation II
Dret_1607	PWY-7185	UTP and CTP dephosphorylation I
Dret_1608	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Dret_1608	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
Dret_1608	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
Dret_1651	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
Dret_1651	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
Dret_1660	PWY-5101	L-isoleucine biosynthesis II
Dret_1660	PWY-5103	L-isoleucine biosynthesis III
Dret_1660	PWY-5104	L-isoleucine biosynthesis IV
Dret_1660	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Dret_1661	PWY-5101	L-isoleucine biosynthesis II
Dret_1661	PWY-5103	L-isoleucine biosynthesis III
Dret_1661	PWY-5104	L-isoleucine biosynthesis IV
Dret_1661	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
Dret_1661	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
Dret_1661	PWY-6389	(<i>S</i>)-acetoin biosynthesis
Dret_1661	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Dret_1662	PWY-5101	L-isoleucine biosynthesis II
Dret_1662	PWY-5103	L-isoleucine biosynthesis III
Dret_1662	PWY-5104	L-isoleucine biosynthesis IV
Dret_1662	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
Dret_1662	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
Dret_1662	PWY-6389	(<i>S</i>)-acetoin biosynthesis
Dret_1662	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Dret_1674	PWY-2781	<i>cis</i>-zeatin biosynthesis
Dret_1683	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Dret_1693	PWY-7346	UDP-&alpha;-D-glucuronate biosynthesis (from UDP-glucose)
Dret_1701	PWY-6012	acyl carrier protein metabolism I
Dret_1701	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
Dret_1702	PWY-6938	NADH repair
Dret_1705	PWY-2941	L-lysine biosynthesis II
Dret_1705	PWY-2942	L-lysine biosynthesis III
Dret_1705	PWY-5097	L-lysine biosynthesis VI
Dret_1705	PWY-6559	spermidine biosynthesis II
Dret_1705	PWY-6562	norspermidine biosynthesis
Dret_1705	PWY-7153	grixazone biosynthesis
Dret_1706	PWY-5101	L-isoleucine biosynthesis II
Dret_1706	PWY-6871	3-methylbutanol biosynthesis
Dret_1722	PWY-3801	sucrose degradation II (sucrose synthase)
Dret_1722	PWY-6527	stachyose degradation
Dret_1722	PWY-6981	chitin biosynthesis
Dret_1722	PWY-7238	sucrose biosynthesis II
Dret_1722	PWY-7343	UDP-glucose biosynthesis
Dret_1723	PWY-6749	CMP-legionaminate biosynthesis I
Dret_1726	PWY-6614	tetrahydrofolate biosynthesis
Dret_1728	PWY-4983	L-citrulline-nitric oxide cycle
Dret_1728	PWY-4984	urea cycle
Dret_1728	PWY-5	canavanine biosynthesis
Dret_1728	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Dret_1728	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Dret_1729	PWY-4983	L-citrulline-nitric oxide cycle
Dret_1729	PWY-4984	urea cycle
Dret_1729	PWY-5	canavanine biosynthesis
Dret_1729	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Dret_1729	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Dret_1731	PWY-4981	L-proline biosynthesis II (from arginine)
Dret_1731	PWY-4984	urea cycle
Dret_1731	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Dret_1734	PWY-6823	molybdenum cofactor biosynthesis
Dret_1740	PWY-6823	molybdenum cofactor biosynthesis
Dret_1744	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
Dret_1750	PWY-6891	thiazole biosynthesis II (Bacillus)
Dret_1750	PWY-6892	thiazole biosynthesis I (E. coli)
Dret_1750	PWY-7560	methylerythritol phosphate pathway II
Dret_1758	PWY-6891	thiazole biosynthesis II (Bacillus)
Dret_1758	PWY-6892	thiazole biosynthesis I (E. coli)
Dret_1758	PWY-7560	methylerythritol phosphate pathway II
Dret_1764	PWY-7560	methylerythritol phosphate pathway II
Dret_1768	PWY-3461	L-tyrosine biosynthesis II
Dret_1768	PWY-3462	L-phenylalanine biosynthesis II
Dret_1768	PWY-6120	L-tyrosine biosynthesis III
Dret_1768	PWY-6627	salinosporamide A biosynthesis
Dret_1827	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Dret_1828	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Dret_1851	PWY-723	alkylnitronates degradation
Dret_1863	PWY-5651	L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
Dret_1863	PWY-6309	L-tryptophan degradation XI (mammalian, via kynurenine)
Dret_1873	PWY-2941	L-lysine biosynthesis II
Dret_1873	PWY-5097	L-lysine biosynthesis VI
Dret_1874	PWY-2941	L-lysine biosynthesis II
Dret_1874	PWY-2942	L-lysine biosynthesis III
Dret_1874	PWY-5097	L-lysine biosynthesis VI
Dret_1875	PWY-7183	pyrimidine nucleobases salvage I
Dret_1910	PWY-5484	glycolysis II (from fructose 6-phosphate)
Dret_1918	PWY-5269	cardiolipin biosynthesis II
Dret_1918	PWY-5668	cardiolipin biosynthesis I
Dret_1930	PWY-1042	glycolysis IV (plant cytosol)
Dret_1930	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
Dret_1930	PWY-5484	glycolysis II (from fructose 6-phosphate)
Dret_1930	PWY-5723	Rubisco shunt
Dret_1930	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Dret_1930	PWY-6886	1-butanol autotrophic biosynthesis
Dret_1930	PWY-6901	superpathway of glucose and xylose degradation
Dret_1930	PWY-7003	glycerol degradation to butanol
Dret_1930	PWY-7124	ethylene biosynthesis V (engineered)
Dret_1930	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
Dret_1938	PWY-5667	CDP-diacylglycerol biosynthesis I
Dret_1938	PWY-5981	CDP-diacylglycerol biosynthesis III
Dret_1938	PWY-7411	superpathway of phosphatidate biosynthesis (yeast)
Dret_1938	PWY-7417	phospholipid remodeling (phosphatidate, yeast)
Dret_1947	PWY-7560	methylerythritol phosphate pathway II
Dret_1954	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Dret_1954	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
Dret_1957	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Dret_1957	PWY-5723	Rubisco shunt
Dret_1959	PWY-5737	(5<i>R</i>)-carbapenem carboxylate biosynthesis
Dret_1959	PWY-6853	ethylene biosynthesis II (microbes)
Dret_1959	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
Dret_1968	PWY-5278	sulfite oxidation III
Dret_1968	PWY-5340	sulfate activation for sulfonation
Dret_1968	PWY-6683	sulfate reduction III (assimilatory)
Dret_1968	PWY-6932	selenate reduction
Dret_1971	PWY-5971	palmitate biosynthesis II (bacteria and plants)
Dret_1971	PWY-5973	<i>cis</i>-vaccenate biosynthesis
Dret_1971	PWY-5989	stearate biosynthesis II (bacteria and plants)
Dret_1971	PWY-6113	superpathway of mycolate biosynthesis
Dret_1971	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
Dret_1971	PWY-6519	8-amino-7-oxononanoate biosynthesis I
Dret_1971	PWY-7096	triclosan resistance
Dret_1971	PWYG-321	mycolate biosynthesis
Dret_1978	PWY-622	starch biosynthesis
Dret_2006	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
Dret_2006	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
Dret_2006	PWY-6896	thiamin salvage I
Dret_2006	PWY-6897	thiamin salvage II
Dret_2010	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Dret_2013	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Dret_2013	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Dret_2022	PWY-6829	tRNA methylation (yeast)
Dret_2022	PWY-7285	methylwyosine biosynthesis
Dret_2022	PWY-7286	7-(3-amino-3-carboxypropyl)-wyosine biosynthesis
Dret_2034	PWY-5278	sulfite oxidation III
Dret_2034	PWY-5340	sulfate activation for sulfonation
Dret_2034	PWY-6683	sulfate reduction III (assimilatory)
Dret_2034	PWY-6932	selenate reduction
Dret_2036	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
Dret_2094	PWY-4261	glycerol degradation I
Dret_2101	PWY-4261	glycerol degradation I
Dret_2101	PWY-6118	glycerol-3-phosphate shuttle
Dret_2101	PWY-6952	glycerophosphodiester degradation
Dret_2102	PWY-4261	glycerol degradation I
Dret_2102	PWY-6118	glycerol-3-phosphate shuttle
Dret_2102	PWY-6952	glycerophosphodiester degradation
Dret_2103	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
Dret_2103	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
Dret_2103	PWY-6897	thiamin salvage II
Dret_2103	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
Dret_2103	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
Dret_2103	PWY-7353	4-methyl-5(&beta;-hydroxyethyl)thiazole salvage (yeast)
Dret_2103	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
Dret_2104	PWY-6897	thiamin salvage II
Dret_2104	PWY-7353	4-methyl-5(&beta;-hydroxyethyl)thiazole salvage (yeast)
Dret_2104	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
Dret_2110	PWY-6823	molybdenum cofactor biosynthesis
Dret_2114	PWY-1042	glycolysis IV (plant cytosol)
Dret_2114	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Dret_2114	PWY-5484	glycolysis II (from fructose 6-phosphate)
Dret_2114	PWY-7385	1,3-propanediol biosynthesis (engineered)
Dret_2131	PWY-5392	reductive TCA cycle II
Dret_2131	PWY-5537	pyruvate fermentation to acetate V
Dret_2131	PWY-5538	pyruvate fermentation to acetate VI
Dret_2131	PWY-5690	TCA cycle II (plants and fungi)
Dret_2131	PWY-5913	TCA cycle VI (obligate autotrophs)
Dret_2131	PWY-6728	methylaspartate cycle
Dret_2131	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Dret_2131	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Dret_2132	PWY-6672	<i>cis</i>-genanyl-CoA degradation
Dret_2132	PWY-7118	chitin degradation to ethanol
Dret_2164	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
Dret_2164	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
Dret_2164	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Dret_2164	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
Dret_2164	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
Dret_2164	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
Dret_2164	PWY-7205	CMP phosphorylation
Dret_2164	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
Dret_2164	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Dret_2164	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
Dret_2164	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Dret_2164	PWY-7224	purine deoxyribonucleosides salvage
Dret_2164	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
Dret_2164	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
Dret_2165	PWY-3341	L-proline biosynthesis III
Dret_2165	PWY-4981	L-proline biosynthesis II (from arginine)
Dret_2165	PWY-6344	L-ornithine degradation II (Stickland reaction)
Dret_2167	PWY-5392	reductive TCA cycle II
Dret_2167	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
Dret_2167	PWY-5690	TCA cycle II (plants and fungi)
Dret_2167	PWY-5913	TCA cycle VI (obligate autotrophs)
Dret_2167	PWY-6728	methylaspartate cycle
Dret_2167	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Dret_2167	PWY-7254	TCA cycle VII (acetate-producers)
Dret_2167	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Dret_2168	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
Dret_2168	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Dret_2168	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
Dret_2168	PWY-7206	pyrimidine deoxyribonucleotides dephosphorylation
Dret_2169	PWY-5941	glycogen degradation II (eukaryotic)
Dret_2169	PWY-622	starch biosynthesis
Dret_2169	PWY-6731	starch degradation III
Dret_2169	PWY-6737	starch degradation V
Dret_2169	PWY-7238	sucrose biosynthesis II
Dret_2171	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Dret_2196	PWY-7205	CMP phosphorylation
Dret_2210	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
Dret_2212	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Dret_2214	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Dret_2228	PWY-5971	palmitate biosynthesis II (bacteria and plants)
Dret_2228	PWY-5973	<i>cis</i>-vaccenate biosynthesis
Dret_2228	PWY-5989	stearate biosynthesis II (bacteria and plants)
Dret_2228	PWY-5994	palmitate biosynthesis I (animals and fungi)
Dret_2228	PWY-6113	superpathway of mycolate biosynthesis
Dret_2228	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
Dret_2228	PWY-6519	8-amino-7-oxononanoate biosynthesis I
Dret_2228	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Dret_2228	PWYG-321	mycolate biosynthesis
Dret_2240	PWY-5686	UMP biosynthesis
Dret_2241	PWY-5686	UMP biosynthesis
Dret_2252	PWY-1042	glycolysis IV (plant cytosol)
Dret_2252	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
Dret_2252	PWY-5484	glycolysis II (from fructose 6-phosphate)
Dret_2252	PWY-5723	Rubisco shunt
Dret_2252	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Dret_2252	PWY-6886	1-butanol autotrophic biosynthesis
Dret_2252	PWY-6901	superpathway of glucose and xylose degradation
Dret_2252	PWY-7003	glycerol degradation to butanol
Dret_2252	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
Dret_2252	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
Dret_2282	PWY-6123	inosine-5'-phosphate biosynthesis I
Dret_2282	PWY-6124	inosine-5'-phosphate biosynthesis II
Dret_2282	PWY-7234	inosine-5'-phosphate biosynthesis III
Dret_2286	PWY-6123	inosine-5'-phosphate biosynthesis I
Dret_2286	PWY-6124	inosine-5'-phosphate biosynthesis II
Dret_2286	PWY-7234	inosine-5'-phosphate biosynthesis III
Dret_2289	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Dret_2292	PWY-5491	diethylphosphate degradation
Dret_2294	PWY-6910	hydroxymethylpyrimidine salvage
Dret_2294	PWY-7356	thiamin salvage IV (yeast)
Dret_2294	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
Dret_2300	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
Dret_2300	PWY-5912	2'-deoxymugineic acid phytosiderophore biosynthesis
Dret_2301	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
Dret_2308	PWY-5750	itaconate biosynthesis
Dret_2308	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Dret_2308	PWY-6146	<i>Methanobacterium thermoautotrophicum</i> biosynthetic metabolism
Dret_2389	PWY-381	nitrate reduction II (assimilatory)
Dret_2389	PWY-5675	nitrate reduction V (assimilatory)
Dret_2389	PWY-6549	L-glutamine biosynthesis III
Dret_2389	PWY-6963	ammonia assimilation cycle I
Dret_2389	PWY-6964	ammonia assimilation cycle II
Dret_2405	PWY-6832	2-aminoethylphosphonate degradation II
Dret_2407	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Dret_2407	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Dret_2408	PWY-1341	phenylacetate degradation II (anaerobic)
Dret_2408	PWY-6318	L-phenylalanine degradation IV (mammalian, via side chain)
Dret_2411	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Dret_2411	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
Dret_2411	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
Dret_2414	PWY-7374	1,4-dihydroxy-6-naphthoate biosynthesis I
Dret_2417	PWY-5839	menaquinol-7 biosynthesis
Dret_2417	PWY-5844	menaquinol-9 biosynthesis
Dret_2417	PWY-5849	menaquinol-6 biosynthesis
Dret_2417	PWY-5890	menaquinol-10 biosynthesis
Dret_2417	PWY-5891	menaquinol-11 biosynthesis
Dret_2417	PWY-5892	menaquinol-12 biosynthesis
Dret_2417	PWY-5895	menaquinol-13 biosynthesis
Dret_2421	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Dret_2423	PWY-5667	CDP-diacylglycerol biosynthesis I
Dret_2423	PWY-5981	CDP-diacylglycerol biosynthesis III
Dret_2429	PWY-4261	glycerol degradation I
Dret_2429	PWY-6118	glycerol-3-phosphate shuttle
Dret_2429	PWY-6952	glycerophosphodiester degradation
Dret_2430	PWY-7039	phosphatidate metabolism, as a signaling molecule
Dret_2432	PWY-1341	phenylacetate degradation II (anaerobic)
Dret_2432	PWY-6318	L-phenylalanine degradation IV (mammalian, via side chain)
Dret_2451	PWY-5523	5,6-dimethylbenzimidazole biosynthesis
Dret_2451	PWY-6167	flavin biosynthesis II (archaea)
Dret_2451	PWY-6168	flavin biosynthesis III (fungi)
Dret_2463	PWY-5686	UMP biosynthesis
Dret_2464	PWY-6123	inosine-5'-phosphate biosynthesis I
Dret_2464	PWY-6124	inosine-5'-phosphate biosynthesis II
Dret_2464	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Dret_2464	PWY-7234	inosine-5'-phosphate biosynthesis III
Dret_2487	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
Dret_2488	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
Dret_2488	PWY-6855	chitin degradation I (archaea)
Dret_2488	PWY-6906	chitin derivatives degradation
Dret_2494	PWY-3801	sucrose degradation II (sucrose synthase)
Dret_2494	PWY-5054	sorbitol biosynthesis I
Dret_2494	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
Dret_2494	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
Dret_2494	PWY-5659	GDP-mannose biosynthesis
Dret_2494	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Dret_2494	PWY-621	sucrose degradation III (sucrose invertase)
Dret_2494	PWY-622	starch biosynthesis
Dret_2494	PWY-6531	mannitol cycle
Dret_2494	PWY-6981	chitin biosynthesis
Dret_2494	PWY-7238	sucrose biosynthesis II
Dret_2494	PWY-7347	sucrose biosynthesis III
Dret_2494	PWY-7385	1,3-propanediol biosynthesis (engineered)
