Daes_0005	PWY-1042	glycolysis IV (plant cytosol)
Daes_0005	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Daes_0005	PWY-5484	glycolysis II (from fructose 6-phosphate)
Daes_0005	PWY-7385	1,3-propanediol biosynthesis (engineered)
Daes_0039	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Daes_0039	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Daes_0042	PWY-5101	L-isoleucine biosynthesis II
Daes_0042	PWY-5103	L-isoleucine biosynthesis III
Daes_0042	PWY-5104	L-isoleucine biosynthesis IV
Daes_0042	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
Daes_0042	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
Daes_0042	PWY-6389	(<i>S</i>)-acetoin biosynthesis
Daes_0042	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Daes_0043	PWY-1281	sulfoacetaldehyde degradation I
Daes_0043	PWY-5482	pyruvate fermentation to acetate II
Daes_0043	PWY-5485	pyruvate fermentation to acetate IV
Daes_0043	PWY-5497	purine nucleobases degradation II (anaerobic)
Daes_0043	PWY-6637	sulfolactate degradation II
Daes_0044	PWY-5482	pyruvate fermentation to acetate II
Daes_0044	PWY-5485	pyruvate fermentation to acetate IV
Daes_0044	PWY-5497	purine nucleobases degradation II (anaerobic)
Daes_0058	PWY-5392	reductive TCA cycle II
Daes_0058	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
Daes_0058	PWY-5690	TCA cycle II (plants and fungi)
Daes_0058	PWY-5913	TCA cycle VI (obligate autotrophs)
Daes_0058	PWY-6728	methylaspartate cycle
Daes_0058	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Daes_0058	PWY-7254	TCA cycle VII (acetate-producers)
Daes_0058	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Daes_0066	PWY-7205	CMP phosphorylation
Daes_0075	PWY-6478	GDP-D-<i>glycero</i>-&alpha;-D-<i>manno</i>-heptose biosynthesis
Daes_0076	PWY-6891	thiazole biosynthesis II (Bacillus)
Daes_0076	PWY-6892	thiazole biosynthesis I (E. coli)
Daes_0076	PWY-7560	methylerythritol phosphate pathway II
Daes_0078	PWY-66	GDP-L-fucose biosynthesis I (from GDP-D-mannose)
Daes_0098	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
Daes_0098	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
Daes_0105	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
Daes_0105	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
Daes_0107	PWY-3821	galactose degradation III
Daes_0107	PWY-6317	galactose degradation I (Leloir pathway)
Daes_0107	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
Daes_0107	PWY-6527	stachyose degradation
Daes_0107	PWY-7328	superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
Daes_0107	PWY-7344	UDP-D-galactose biosynthesis
Daes_0165	PWY-6823	molybdenum cofactor biosynthesis
Daes_0168	PWY-5964	guanylyl molybdenum cofactor biosynthesis
Daes_0174	PWY-6829	tRNA methylation (yeast)
Daes_0189	PWY-6749	CMP-legionaminate biosynthesis I
Daes_0193	PWY-6654	phosphopantothenate biosynthesis III
Daes_0200	PWY-5392	reductive TCA cycle II
Daes_0200	PWY-5537	pyruvate fermentation to acetate V
Daes_0200	PWY-5538	pyruvate fermentation to acetate VI
Daes_0200	PWY-5690	TCA cycle II (plants and fungi)
Daes_0200	PWY-5913	TCA cycle VI (obligate autotrophs)
Daes_0200	PWY-6728	methylaspartate cycle
Daes_0200	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Daes_0200	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Daes_0202	PWY-6672	<i>cis</i>-genanyl-CoA degradation
Daes_0202	PWY-7118	chitin degradation to ethanol
Daes_0207	PWY-6160	3-dehydroquinate biosynthesis II (archaea)
Daes_0255	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
Daes_0274	PWY-5913	TCA cycle VI (obligate autotrophs)
Daes_0274	PWY-6318	L-phenylalanine degradation IV (mammalian, via side chain)
Daes_0274	PWY-6638	sulfolactate degradation III
Daes_0274	PWY-6642	(<i>R</i>)-cysteate degradation
Daes_0274	PWY-6643	coenzyme M biosynthesis II
Daes_0274	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
Daes_0274	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
Daes_0274	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
Daes_0284	PWY-3801	sucrose degradation II (sucrose synthase)
Daes_0284	PWY-5054	sorbitol biosynthesis I
Daes_0284	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
Daes_0284	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
Daes_0284	PWY-5659	GDP-mannose biosynthesis
Daes_0284	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Daes_0284	PWY-621	sucrose degradation III (sucrose invertase)
Daes_0284	PWY-622	starch biosynthesis
Daes_0284	PWY-6531	mannitol cycle
Daes_0284	PWY-6981	chitin biosynthesis
Daes_0284	PWY-7238	sucrose biosynthesis II
Daes_0284	PWY-7347	sucrose biosynthesis III
Daes_0284	PWY-7385	1,3-propanediol biosynthesis (engineered)
Daes_0296	PWY-5198	factor 420 biosynthesis
Daes_0298	PWY-5392	reductive TCA cycle II
Daes_0298	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
Daes_0298	PWY-5690	TCA cycle II (plants and fungi)
Daes_0298	PWY-5913	TCA cycle VI (obligate autotrophs)
Daes_0298	PWY-6728	methylaspartate cycle
Daes_0298	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Daes_0298	PWY-7254	TCA cycle VII (acetate-producers)
Daes_0298	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Daes_0299	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
Daes_0301	PWY-6759	hydrogen production III
Daes_0301	PWY-6785	hydrogen production VIII
Daes_0310	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
Daes_0310	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
Daes_0310	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
Daes_0310	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
Daes_0312	PWY-5663	tetrahydrobiopterin biosynthesis I
Daes_0312	PWY-5664	tetrahydrobiopterin biosynthesis II
Daes_0312	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
Daes_0312	PWY-6703	preQ<sub>0</sub> biosynthesis
Daes_0312	PWY-6983	tetrahydrobiopterin biosynthesis III
Daes_0312	PWY-7442	drosopterin and aurodrosopterin biosynthesis
Daes_0314	PWY-7560	methylerythritol phosphate pathway II
Daes_0333	PWY-5651	L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
Daes_0333	PWY-6309	L-tryptophan degradation XI (mammalian, via kynurenine)
Daes_0352	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
Daes_0369	PWY-5674	nitrate reduction IV (dissimilatory)
Daes_0383	PWY-1042	glycolysis IV (plant cytosol)
Daes_0383	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Daes_0383	PWY-5484	glycolysis II (from fructose 6-phosphate)
Daes_0383	PWY-7385	1,3-propanediol biosynthesis (engineered)
Daes_0500	PWY-3961	phosphopantothenate biosynthesis II
Daes_0502	PWY-1042	glycolysis IV (plant cytosol)
Daes_0502	PWY-1622	formaldehyde assimilation I (serine pathway)
Daes_0502	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
Daes_0502	PWY-5484	glycolysis II (from fructose 6-phosphate)
Daes_0502	PWY-5723	Rubisco shunt
Daes_0502	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Daes_0502	PWY-6886	1-butanol autotrophic biosynthesis
Daes_0502	PWY-6901	superpathway of glucose and xylose degradation
Daes_0502	PWY-7003	glycerol degradation to butanol
Daes_0502	PWY-7124	ethylene biosynthesis V (engineered)
Daes_0502	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
Daes_0511	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
Daes_0511	PWY-2201	folate transformations I
Daes_0511	PWY-3841	folate transformations II
Daes_0511	PWY-5030	L-histidine degradation III
Daes_0511	PWY-5497	purine nucleobases degradation II (anaerobic)
Daes_0511	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
Daes_0529	PWY-5372	carbon tetrachloride degradation II
Daes_0529	PWY-6780	hydrogen production VI
Daes_0533	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
Daes_0533	PWY-6855	chitin degradation I (archaea)
Daes_0533	PWY-6906	chitin derivatives degradation
Daes_0593	PWY-5198	factor 420 biosynthesis
Daes_0595	PWY-5392	reductive TCA cycle II
Daes_0595	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
Daes_0595	PWY-5690	TCA cycle II (plants and fungi)
Daes_0595	PWY-5913	TCA cycle VI (obligate autotrophs)
Daes_0595	PWY-6728	methylaspartate cycle
Daes_0595	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Daes_0595	PWY-7254	TCA cycle VII (acetate-producers)
Daes_0595	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Daes_0596	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
Daes_0598	PWY-6759	hydrogen production III
Daes_0598	PWY-6785	hydrogen production VIII
Daes_0600	PWY-2941	L-lysine biosynthesis II
Daes_0600	PWY-5097	L-lysine biosynthesis VI
Daes_0665	PWY-6672	<i>cis</i>-genanyl-CoA degradation
Daes_0665	PWY-7118	chitin degradation to ethanol
Daes_0683	PWY-4981	L-proline biosynthesis II (from arginine)
Daes_0689	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
Daes_0689	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
Daes_0689	PWY-6269	adenosylcobalamin salvage from cobinamide II
Daes_0705	PWY-5737	(5<i>R</i>)-carbapenem carboxylate biosynthesis
Daes_0705	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
Daes_0723	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Daes_0746	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Daes_0746	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
Daes_0746	PWY-5194	siroheme biosynthesis
Daes_0746	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
Daes_0747	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Daes_0747	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
Daes_0748	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
Daes_0751	PWY-5667	CDP-diacylglycerol biosynthesis I
Daes_0751	PWY-5981	CDP-diacylglycerol biosynthesis III
Daes_0753	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Daes_0754	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
Daes_0765	PWY-6829	tRNA methylation (yeast)
Daes_0765	PWY-7285	methylwyosine biosynthesis
Daes_0765	PWY-7286	7-(3-amino-3-carboxypropyl)-wyosine biosynthesis
Daes_0770	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
Daes_0787	PWY-5674	nitrate reduction IV (dissimilatory)
Daes_0791	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Daes_0791	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Daes_0797	PWY-5839	menaquinol-7 biosynthesis
Daes_0797	PWY-5844	menaquinol-9 biosynthesis
Daes_0797	PWY-5849	menaquinol-6 biosynthesis
Daes_0797	PWY-5890	menaquinol-10 biosynthesis
Daes_0797	PWY-5891	menaquinol-11 biosynthesis
Daes_0797	PWY-5892	menaquinol-12 biosynthesis
Daes_0797	PWY-5895	menaquinol-13 biosynthesis
Daes_0800	PWY-7374	1,4-dihydroxy-6-naphthoate biosynthesis I
Daes_0802	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Daes_0802	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
Daes_0802	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
Daes_0803	PWY-5674	nitrate reduction IV (dissimilatory)
Daes_0817	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
Daes_0824	PWY-5101	L-isoleucine biosynthesis II
Daes_0824	PWY-5103	L-isoleucine biosynthesis III
Daes_0824	PWY-5104	L-isoleucine biosynthesis IV
Daes_0824	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Daes_0827	PWY-5506	methanol oxidation to formaldehyde IV
Daes_0828	PWY-5443	aminopropanol phosphate biosynthesis I
Daes_0861	PWY-5392	reductive TCA cycle II
Daes_0861	PWY-5537	pyruvate fermentation to acetate V
Daes_0861	PWY-5538	pyruvate fermentation to acetate VI
Daes_0861	PWY-5690	TCA cycle II (plants and fungi)
Daes_0861	PWY-5913	TCA cycle VI (obligate autotrophs)
Daes_0861	PWY-6728	methylaspartate cycle
Daes_0861	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Daes_0861	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Daes_0874	PWY-5523	5,6-dimethylbenzimidazole biosynthesis
Daes_0874	PWY-6167	flavin biosynthesis II (archaea)
Daes_0874	PWY-6168	flavin biosynthesis III (fungi)
Daes_0876	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Daes_0881	PWY-7560	methylerythritol phosphate pathway II
Daes_0891	PWY-40	putrescine biosynthesis I
Daes_0891	PWY-6305	putrescine biosynthesis IV
Daes_0892	PWY-6562	norspermidine biosynthesis
Daes_0894	PWY-40	putrescine biosynthesis I
Daes_0894	PWY-43	putrescine biosynthesis II
Daes_0894	PWY-6305	putrescine biosynthesis IV
Daes_0894	PWY-6834	spermidine biosynthesis III
Daes_0911	PWY-6891	thiazole biosynthesis II (Bacillus)
Daes_0911	PWY-6892	thiazole biosynthesis I (E. coli)
Daes_0911	PWY-7560	methylerythritol phosphate pathway II
Daes_0920	PWY-7560	methylerythritol phosphate pathway II
Daes_0921	PWY-6823	molybdenum cofactor biosynthesis
Daes_0922	PWY-6823	molybdenum cofactor biosynthesis
Daes_0937	PWY-1341	phenylacetate degradation II (anaerobic)
Daes_0937	PWY-6318	L-phenylalanine degradation IV (mammalian, via side chain)
Daes_0950	PWY-5958	acridone alkaloid biosynthesis
Daes_0950	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
Daes_0950	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
Daes_0951	PWY-5958	acridone alkaloid biosynthesis
Daes_0951	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
Daes_0951	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
Daes_0952	PWY-7303	3-dimethylallyl-4-hydroxybenzoate biosynthesis
Daes_0953	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Daes_0954	PWY-3461	L-tyrosine biosynthesis II
Daes_0954	PWY-3462	L-phenylalanine biosynthesis II
Daes_0954	PWY-6120	L-tyrosine biosynthesis III
Daes_0954	PWY-6627	salinosporamide A biosynthesis
Daes_0954	PWY-7432	L-phenylalanine biosynthesis III (cytosolic, plants)
Daes_0955	PWY-6160	3-dehydroquinate biosynthesis II (archaea)
Daes_0956	PWY-6160	3-dehydroquinate biosynthesis II (archaea)
Daes_0960	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
Daes_0962	PWY-6519	8-amino-7-oxononanoate biosynthesis I
Daes_0962	PWY-6578	8-amino-7-oxononanoate biosynthesis III
Daes_0962	PWY-7147	8-amino-7-oxononanoate biosynthesis II
Daes_0966	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
Daes_0966	PWY-5912	2'-deoxymugineic acid phytosiderophore biosynthesis
Daes_0967	PWY-5155	&beta;-alanine biosynthesis III
Daes_0971	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
Daes_0971	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Daes_0971	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Daes_0973	PWY-2723	trehalose degradation V
Daes_0973	PWY-3801	sucrose degradation II (sucrose synthase)
Daes_0973	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
Daes_0973	PWY-5661	GDP-glucose biosynthesis
Daes_0973	PWY-5661-1	Daes_0973|Daes_0973|YP_004120735.1|GeneID:10095560
Daes_0973	PWY-5940	streptomycin biosynthesis
Daes_0973	PWY-5941	glycogen degradation II (eukaryotic)
Daes_0973	PWY-622	starch biosynthesis
Daes_0973	PWY-6731	starch degradation III
Daes_0973	PWY-6737	starch degradation V
Daes_0973	PWY-6749	CMP-legionaminate biosynthesis I
Daes_0973	PWY-7238	sucrose biosynthesis II
Daes_0973	PWY-7343	UDP-glucose biosynthesis
Daes_0987	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Daes_0987	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Daes_0998	PWY-2201	folate transformations I
Daes_0998	PWY-5497	purine nucleobases degradation II (anaerobic)
Daes_0999	PWY-6478	GDP-D-<i>glycero</i>-&alpha;-D-<i>manno</i>-heptose biosynthesis
Daes_1020	PWY-6871	3-methylbutanol biosynthesis
Daes_1030	PWY-6823	molybdenum cofactor biosynthesis
Daes_1041	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
Daes_1041	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
Daes_1041	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
Daes_1049	PWY-6123	inosine-5'-phosphate biosynthesis I
Daes_1049	PWY-6124	inosine-5'-phosphate biosynthesis II
Daes_1049	PWY-7234	inosine-5'-phosphate biosynthesis III
Daes_1053	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Daes_1061	PWY-5392	reductive TCA cycle II
Daes_1061	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
Daes_1061	PWY-5690	TCA cycle II (plants and fungi)
Daes_1061	PWY-5913	TCA cycle VI (obligate autotrophs)
Daes_1061	PWY-6728	methylaspartate cycle
Daes_1061	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Daes_1061	PWY-7254	TCA cycle VII (acetate-producers)
Daes_1061	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Daes_1070	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Daes_1070	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Daes_1072	PWY-1281	sulfoacetaldehyde degradation I
Daes_1072	PWY-5482	pyruvate fermentation to acetate II
Daes_1072	PWY-5485	pyruvate fermentation to acetate IV
Daes_1072	PWY-5497	purine nucleobases degradation II (anaerobic)
Daes_1072	PWY-6637	sulfolactate degradation II
Daes_1073	PWY-5482	pyruvate fermentation to acetate II
Daes_1073	PWY-5485	pyruvate fermentation to acetate IV
Daes_1073	PWY-5497	purine nucleobases degradation II (anaerobic)
Daes_1136	PWY-381	nitrate reduction II (assimilatory)
Daes_1136	PWY-5675	nitrate reduction V (assimilatory)
Daes_1136	PWY-6549	L-glutamine biosynthesis III
Daes_1136	PWY-6963	ammonia assimilation cycle I
Daes_1136	PWY-6964	ammonia assimilation cycle II
Daes_1151	PWY-2161	folate polyglutamylation
Daes_1157	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Daes_1157	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Daes_1158	PWY-6728	methylaspartate cycle
Daes_1158	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Daes_1158	PWY-7118	chitin degradation to ethanol
Daes_1158	PWY-7294	xylose degradation IV
Daes_1158	PWY-7295	L-arabinose degradation IV
Daes_1159	PWY-5532	adenosine nucleotides degradation IV
Daes_1160	PWY-5532	adenosine nucleotides degradation IV
Daes_1163	PWY-7399	methylphosphonate degradation II
Daes_1166	PWY-7399	methylphosphonate degradation II
Daes_1168	PWY-7399	methylphosphonate degradation II
Daes_1169	PWY-7399	methylphosphonate degradation II
Daes_1204	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Daes_1204	PWY-5686	UMP biosynthesis
Daes_1204	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Daes_1205	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Daes_1205	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
Daes_1205	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
Daes_1205	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
Daes_1220	PWY-5350	thiosulfate disproportionation III (rhodanese)
Daes_1225	PWY-1341	phenylacetate degradation II (anaerobic)
Daes_1225	PWY-6318	L-phenylalanine degradation IV (mammalian, via side chain)
Daes_1230	PWY-6123	inosine-5'-phosphate biosynthesis I
Daes_1230	PWY-6124	inosine-5'-phosphate biosynthesis II
Daes_1230	PWY-7234	inosine-5'-phosphate biosynthesis III
Daes_1242	PWY-5022	4-aminobutanoate degradation V
Daes_1242	PWY-6728	methylaspartate cycle
Daes_1242	PWY-7126	ethylene biosynthesis IV
Daes_1252	PWY-4981	L-proline biosynthesis II (from arginine)
Daes_1252	PWY-4984	urea cycle
Daes_1252	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Daes_1253	PWY-4983	L-citrulline-nitric oxide cycle
Daes_1253	PWY-4984	urea cycle
Daes_1253	PWY-5	canavanine biosynthesis
Daes_1253	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Daes_1253	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Daes_1254	PWY-4983	L-citrulline-nitric oxide cycle
Daes_1254	PWY-4984	urea cycle
Daes_1254	PWY-5	canavanine biosynthesis
Daes_1254	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Daes_1254	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Daes_1256	PWY-6614	tetrahydrofolate biosynthesis
Daes_1259	PWY-6749	CMP-legionaminate biosynthesis I
Daes_1260	PWY-3801	sucrose degradation II (sucrose synthase)
Daes_1260	PWY-6527	stachyose degradation
Daes_1260	PWY-6981	chitin biosynthesis
Daes_1260	PWY-7238	sucrose biosynthesis II
Daes_1260	PWY-7343	UDP-glucose biosynthesis
Daes_1267	PWY-6891	thiazole biosynthesis II (Bacillus)
Daes_1267	PWY-6892	thiazole biosynthesis I (E. coli)
Daes_1268	PWY-6892	thiazole biosynthesis I (E. coli)
Daes_1268	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
Daes_1270	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
Daes_1270	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
Daes_1270	PWY-6897	thiamin salvage II
Daes_1270	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
Daes_1270	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
Daes_1270	PWY-7353	4-methyl-5(&beta;-hydroxyethyl)thiazole salvage (yeast)
Daes_1270	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
Daes_1271	PWY-6890	4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis
Daes_1299	PWY-3781	aerobic respiration I (cytochrome c)
Daes_1299	PWY-4302	aerobic respiration III (alternative oxidase pathway)
Daes_1299	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
Daes_1299	PWY-6692	Fe(II) oxidation
Daes_1305	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Daes_1312	PWY-2201	folate transformations I
Daes_1312	PWY-3841	folate transformations II
Daes_1313	PWY-2941	L-lysine biosynthesis II
Daes_1313	PWY-2942	L-lysine biosynthesis III
Daes_1313	PWY-5097	L-lysine biosynthesis VI
Daes_1313	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Daes_1313	PWY-6559	spermidine biosynthesis II
Daes_1313	PWY-6562	norspermidine biosynthesis
Daes_1313	PWY-7153	grixazone biosynthesis
Daes_1313	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Daes_1318	PWY-3221	dTDP-L-rhamnose biosynthesis II
Daes_1318	PWY-6808	dTDP-D-forosamine biosynthesis
Daes_1318	PWY-6942	dTDP-D-desosamine biosynthesis
Daes_1318	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
Daes_1318	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
Daes_1318	PWY-6974	dTDP-L-olivose biosynthesis
Daes_1318	PWY-6976	dTDP-L-mycarose biosynthesis
Daes_1318	PWY-7104	dTDP-L-megosamine biosynthesis
Daes_1318	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
Daes_1318	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
Daes_1318	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
Daes_1318	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
Daes_1318	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
Daes_1318	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
Daes_1318	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
Daes_1318	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
Daes_1402	PWY-5971	palmitate biosynthesis II (bacteria and plants)
Daes_1402	PWY-5973	<i>cis</i>-vaccenate biosynthesis
Daes_1402	PWY-5989	stearate biosynthesis II (bacteria and plants)
Daes_1402	PWY-5994	palmitate biosynthesis I (animals and fungi)
Daes_1402	PWY-6113	superpathway of mycolate biosynthesis
Daes_1402	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
Daes_1402	PWY-6519	8-amino-7-oxononanoate biosynthesis I
Daes_1402	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Daes_1402	PWYG-321	mycolate biosynthesis
Daes_1409	PWY-6700	queuosine biosynthesis
Daes_1414	PWY-5340	sulfate activation for sulfonation
Daes_1423	PWY-5269	cardiolipin biosynthesis II
Daes_1423	PWY-5668	cardiolipin biosynthesis I
Daes_1428	PWY-2723	trehalose degradation V
Daes_1428	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
Daes_1428	PWY-5661	GDP-glucose biosynthesis
Daes_1428	PWY-7238	sucrose biosynthesis II
Daes_1428	PWY-7385	1,3-propanediol biosynthesis (engineered)
Daes_1438	PWY-1042	glycolysis IV (plant cytosol)
Daes_1438	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
Daes_1438	PWY-5484	glycolysis II (from fructose 6-phosphate)
Daes_1438	PWY-5723	Rubisco shunt
Daes_1438	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Daes_1438	PWY-6886	1-butanol autotrophic biosynthesis
Daes_1438	PWY-6901	superpathway of glucose and xylose degradation
Daes_1438	PWY-7003	glycerol degradation to butanol
Daes_1438	PWY-7124	ethylene biosynthesis V (engineered)
Daes_1438	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
Daes_1441	PWY-5057	L-valine degradation II
Daes_1441	PWY-5076	L-leucine degradation III
Daes_1441	PWY-5078	L-isoleucine degradation II
Daes_1441	PWY-5101	L-isoleucine biosynthesis II
Daes_1441	PWY-5103	L-isoleucine biosynthesis III
Daes_1441	PWY-5104	L-isoleucine biosynthesis IV
Daes_1441	PWY-5108	L-isoleucine biosynthesis V
Daes_1451	PWY-4381	fatty acid biosynthesis initiation I
Daes_1451	PWY-5743	3-hydroxypropanoate cycle
Daes_1451	PWY-5744	glyoxylate assimilation
Daes_1451	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Daes_1451	PWY-6679	jadomycin biosynthesis
Daes_1451	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Daes_1452	PWY-5750	itaconate biosynthesis
Daes_1452	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Daes_1452	PWY-6146	<i>Methanobacterium thermoautotrophicum</i> biosynthetic metabolism
Daes_1468	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Daes_1468	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
Daes_1468	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
Daes_1469	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
Daes_1469	PWY-7177	UTP and CTP dephosphorylation II
Daes_1469	PWY-7185	UTP and CTP dephosphorylation I
Daes_1470	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
Daes_1470	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
Daes_1471	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
Daes_1471	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
Daes_1480	PWY-7310	D-glucosaminate degradation
Daes_1483	PWY-2941	L-lysine biosynthesis II
Daes_1483	PWY-2942	L-lysine biosynthesis III
Daes_1483	PWY-5097	L-lysine biosynthesis VI
Daes_1496	PWY-6605	adenine and adenosine salvage II
Daes_1496	PWY-6610	adenine and adenosine salvage IV
Daes_1507	PWY-3341	L-proline biosynthesis III
Daes_1507	PWY-4981	L-proline biosynthesis II (from arginine)
Daes_1507	PWY-6344	L-ornithine degradation II (Stickland reaction)
Daes_1508	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
Daes_1508	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
Daes_1508	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Daes_1508	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
Daes_1508	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
Daes_1508	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
Daes_1508	PWY-7205	CMP phosphorylation
Daes_1508	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
Daes_1508	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Daes_1508	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
Daes_1508	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Daes_1508	PWY-7224	purine deoxyribonucleosides salvage
Daes_1508	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
Daes_1508	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
Daes_1520	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
Daes_1520	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Daes_1520	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
Daes_1520	PWY-7206	pyrimidine deoxyribonucleotides dephosphorylation
Daes_1532	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Daes_1535	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Daes_1537	PWY-5194	siroheme biosynthesis
Daes_1537	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
Daes_1542	PWY-2941	L-lysine biosynthesis II
Daes_1542	PWY-2942	L-lysine biosynthesis III
Daes_1542	PWY-5097	L-lysine biosynthesis VI
Daes_1551	PWY-5097	L-lysine biosynthesis VI
Daes_1555	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
Daes_1555	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Daes_1555	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
Daes_1555	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
Daes_1557	PWY-1042	glycolysis IV (plant cytosol)
Daes_1557	PWY-5484	glycolysis II (from fructose 6-phosphate)
Daes_1557	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Daes_1557	PWY-7003	glycerol degradation to butanol
Daes_1558	PWY-1042	glycolysis IV (plant cytosol)
Daes_1558	PWY-5484	glycolysis II (from fructose 6-phosphate)
Daes_1558	PWY-6886	1-butanol autotrophic biosynthesis
Daes_1558	PWY-6901	superpathway of glucose and xylose degradation
Daes_1558	PWY-7003	glycerol degradation to butanol
Daes_1561	PWY-2301	<i>myo</i>-inositol biosynthesis
Daes_1561	PWY-4702	phytate degradation I
Daes_1561	PWY-6363	D-<i>myo</i>-inositol (1,4,5)-trisphosphate degradation
Daes_1571	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Daes_1571	PWY-6416	quinate degradation II
Daes_1571	PWY-6707	gallate biosynthesis
Daes_1584	PWY-6703	preQ<sub>0</sub> biosynthesis
Daes_1630	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
Daes_1680	PWY-5750	itaconate biosynthesis
Daes_1680	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Daes_1680	PWY-6146	<i>Methanobacterium thermoautotrophicum</i> biosynthetic metabolism
Daes_1681	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
Daes_1681	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
Daes_1686	PWY-5392	reductive TCA cycle II
Daes_1686	PWY-5537	pyruvate fermentation to acetate V
Daes_1686	PWY-5538	pyruvate fermentation to acetate VI
Daes_1686	PWY-5690	TCA cycle II (plants and fungi)
Daes_1686	PWY-5913	TCA cycle VI (obligate autotrophs)
Daes_1686	PWY-6728	methylaspartate cycle
Daes_1686	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Daes_1686	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Daes_1696	PWY-5101	L-isoleucine biosynthesis II
Daes_1696	PWY-5103	L-isoleucine biosynthesis III
Daes_1696	PWY-5104	L-isoleucine biosynthesis IV
Daes_1696	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
Daes_1696	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
Daes_1696	PWY-6389	(<i>S</i>)-acetoin biosynthesis
Daes_1696	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Daes_1705	PWY-6823	molybdenum cofactor biosynthesis
Daes_1705	PWY-6891	thiazole biosynthesis II (Bacillus)
Daes_1705	PWY-6892	thiazole biosynthesis I (E. coli)
Daes_1705	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
Daes_1706	PWY-6936	seleno-amino acid biosynthesis
Daes_1717	PWY-5316	nicotine biosynthesis
Daes_1717	PWY-5381	pyridine nucleotide cycling (plants)
Daes_1717	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
Daes_1717	PWY-7342	superpathway of nicotine biosynthesis
Daes_1718	PWY-5316	nicotine biosynthesis
Daes_1718	PWY-7342	superpathway of nicotine biosynthesis
Daes_1719	PWY-5316	nicotine biosynthesis
Daes_1719	PWY-7342	superpathway of nicotine biosynthesis
Daes_1722	PWY-6683	sulfate reduction III (assimilatory)
Daes_1737	PWY-7346	UDP-&alpha;-D-glucuronate biosynthesis (from UDP-glucose)
Daes_1739	PWY-6012	acyl carrier protein metabolism I
Daes_1739	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
Daes_1740	PWY-6938	NADH repair
Daes_1743	PWY-2941	L-lysine biosynthesis II
Daes_1743	PWY-2942	L-lysine biosynthesis III
Daes_1743	PWY-5097	L-lysine biosynthesis VI
Daes_1743	PWY-6559	spermidine biosynthesis II
Daes_1743	PWY-6562	norspermidine biosynthesis
Daes_1743	PWY-7153	grixazone biosynthesis
Daes_1744	PWY-5101	L-isoleucine biosynthesis II
Daes_1744	PWY-6871	3-methylbutanol biosynthesis
Daes_1746	PWY-1042	glycolysis IV (plant cytosol)
Daes_1746	PWY-5484	glycolysis II (from fructose 6-phosphate)
Daes_1746	PWY-6901	superpathway of glucose and xylose degradation
Daes_1746	PWY-7003	glycerol degradation to butanol
Daes_1747	PWY-5381	pyridine nucleotide cycling (plants)
Daes_1747	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
Daes_1747	PWY-6596	adenosine nucleotides degradation I
Daes_1747	PWY-6606	guanosine nucleotides degradation II
Daes_1747	PWY-6607	guanosine nucleotides degradation I
Daes_1747	PWY-6608	guanosine nucleotides degradation III
Daes_1747	PWY-7185	UTP and CTP dephosphorylation I
Daes_1749	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
Daes_1749	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Daes_1749	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
Daes_1749	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
Daes_1749	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
Daes_1749	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
Daes_1757	PWY-5344	L-homocysteine biosynthesis
Daes_1757	PWY-7174	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation II
Daes_1769	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
Daes_1769	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
Daes_1769	PWY-6896	thiamin salvage I
Daes_1769	PWY-6897	thiamin salvage II
Daes_1773	PWY-5101	L-isoleucine biosynthesis II
Daes_1773	PWY-5103	L-isoleucine biosynthesis III
Daes_1773	PWY-5104	L-isoleucine biosynthesis IV
Daes_1773	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Daes_1774	PWY-5101	L-isoleucine biosynthesis II
Daes_1774	PWY-5103	L-isoleucine biosynthesis III
Daes_1774	PWY-5104	L-isoleucine biosynthesis IV
Daes_1774	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
Daes_1774	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
Daes_1774	PWY-6389	(<i>S</i>)-acetoin biosynthesis
Daes_1774	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Daes_1775	PWY-5101	L-isoleucine biosynthesis II
Daes_1775	PWY-5103	L-isoleucine biosynthesis III
Daes_1775	PWY-5104	L-isoleucine biosynthesis IV
Daes_1775	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
Daes_1775	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
Daes_1775	PWY-6389	(<i>S</i>)-acetoin biosynthesis
Daes_1775	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Daes_1787	PWY-2781	<i>cis</i>-zeatin biosynthesis
Daes_1795	PWY-1042	glycolysis IV (plant cytosol)
Daes_1795	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
Daes_1795	PWY-5484	glycolysis II (from fructose 6-phosphate)
Daes_1795	PWY-5723	Rubisco shunt
Daes_1795	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Daes_1795	PWY-6886	1-butanol autotrophic biosynthesis
Daes_1795	PWY-6901	superpathway of glucose and xylose degradation
Daes_1795	PWY-7003	glycerol degradation to butanol
Daes_1795	PWY-7124	ethylene biosynthesis V (engineered)
Daes_1795	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
Daes_1798	PWY-1341	phenylacetate degradation II (anaerobic)
Daes_1798	PWY-6318	L-phenylalanine degradation IV (mammalian, via side chain)
Daes_1806	PWY-2941	L-lysine biosynthesis II
Daes_1806	PWY-2942	L-lysine biosynthesis III
Daes_1806	PWY-5097	L-lysine biosynthesis VI
Daes_1826	PWY-5484	glycolysis II (from fructose 6-phosphate)
Daes_1831	PWY-5269	cardiolipin biosynthesis II
Daes_1831	PWY-5668	cardiolipin biosynthesis I
Daes_1838	PWY-7181	pyrimidine deoxyribonucleosides degradation
Daes_1839	PWY-6556	pyrimidine ribonucleosides salvage II
Daes_1839	PWY-7181	pyrimidine deoxyribonucleosides degradation
Daes_1839	PWY-7193	pyrimidine ribonucleosides salvage I
Daes_1839	PWY-7199	pyrimidine deoxyribonucleosides salvage
Daes_1844	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
Daes_1844	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
Daes_1844	PWY-6897	thiamin salvage II
Daes_1844	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
Daes_1844	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
Daes_1844	PWY-6910	hydroxymethylpyrimidine salvage
Daes_1844	PWY-7353	4-methyl-5(&beta;-hydroxyethyl)thiazole salvage (yeast)
Daes_1844	PWY-7356	thiamin salvage IV (yeast)
Daes_1844	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
Daes_1859	PWY-723	alkylnitronates degradation
Daes_1909	PWY-7396	butanol and isobutanol biosynthesis (engineered)
Daes_1912	PWY-6871	3-methylbutanol biosynthesis
Daes_1913	PWY-5669	phosphatidylethanolamine biosynthesis I
Daes_1914	PWY-5669	phosphatidylethanolamine biosynthesis I
Daes_1921	PWY-1622	formaldehyde assimilation I (serine pathway)
Daes_1921	PWY-5484	glycolysis II (from fructose 6-phosphate)
Daes_1930	PWY-3221	dTDP-L-rhamnose biosynthesis II
Daes_1930	PWY-6808	dTDP-D-forosamine biosynthesis
Daes_1930	PWY-6942	dTDP-D-desosamine biosynthesis
Daes_1930	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
Daes_1930	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
Daes_1930	PWY-6974	dTDP-L-olivose biosynthesis
Daes_1930	PWY-6976	dTDP-L-mycarose biosynthesis
Daes_1930	PWY-7104	dTDP-L-megosamine biosynthesis
Daes_1930	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
Daes_1930	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
Daes_1930	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
Daes_1930	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
Daes_1930	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
Daes_1930	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
Daes_1930	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
Daes_1930	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
Daes_1973	PWY-6891	thiazole biosynthesis II (Bacillus)
Daes_1973	PWY-6892	thiazole biosynthesis I (E. coli)
Daes_1973	PWY-7560	methylerythritol phosphate pathway II
Daes_1985	PWY-6749	CMP-legionaminate biosynthesis I
Daes_1985	PWY-7131	CMP-legionaminate biosynthesis II
Daes_1989	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
Daes_1989	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
Daes_2007	PWY-6123	inosine-5'-phosphate biosynthesis I
Daes_2007	PWY-6124	inosine-5'-phosphate biosynthesis II
Daes_2007	PWY-7234	inosine-5'-phosphate biosynthesis III
Daes_2015	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Daes_2032	PWY-6823	molybdenum cofactor biosynthesis
Daes_2038	PWY-6160	3-dehydroquinate biosynthesis II (archaea)
Daes_2065	PWY-3781	aerobic respiration I (cytochrome c)
Daes_2065	PWY-4302	aerobic respiration III (alternative oxidase pathway)
Daes_2065	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
Daes_2065	PWY-5690	TCA cycle II (plants and fungi)
Daes_2065	PWY-6728	methylaspartate cycle
Daes_2065	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Daes_2065	PWY-7254	TCA cycle VII (acetate-producers)
Daes_2065	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Daes_2066	PWY-3781	aerobic respiration I (cytochrome c)
Daes_2066	PWY-4302	aerobic respiration III (alternative oxidase pathway)
Daes_2066	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
Daes_2066	PWY-5690	TCA cycle II (plants and fungi)
Daes_2066	PWY-6728	methylaspartate cycle
Daes_2066	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Daes_2066	PWY-7254	TCA cycle VII (acetate-producers)
Daes_2066	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Daes_2070	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Daes_2080	PWY-4381	fatty acid biosynthesis initiation I
Daes_2080	PWY-5743	3-hydroxypropanoate cycle
Daes_2080	PWY-5744	glyoxylate assimilation
Daes_2080	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Daes_2080	PWY-6679	jadomycin biosynthesis
Daes_2080	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Daes_2085	PWY-4202	arsenate detoxification I (glutaredoxin)
Daes_2085	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
Daes_2085	PWY-6608	guanosine nucleotides degradation III
Daes_2085	PWY-6609	adenine and adenosine salvage III
Daes_2085	PWY-6611	adenine and adenosine salvage V
Daes_2085	PWY-6620	guanine and guanosine salvage
Daes_2085	PWY-6627	salinosporamide A biosynthesis
Daes_2085	PWY-6644	fluoroacetate and fluorothreonine biosynthesis
Daes_2085	PWY-7179	purine deoxyribonucleosides degradation I
Daes_2085	PWY-7179-1	purine deoxyribonucleosides degradation
Daes_2092	PWY-7180	2'-deoxy-&alpha;-D-ribose 1-phosphate degradation
Daes_2106	PWY-5659	GDP-mannose biosynthesis
Daes_2106	PWY-6073	alginate biosynthesis I (algal)
Daes_2106	PWY-6082	alginate biosynthesis II (bacterial)
Daes_2106	PWY-882	L-ascorbate biosynthesis I (L-galactose pathway)
Daes_2117	PWY-6897	thiamin salvage II
Daes_2117	PWY-7353	4-methyl-5(&beta;-hydroxyethyl)thiazole salvage (yeast)
Daes_2117	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
Daes_2123	PWY-4361	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation
Daes_2123	PWY-7174	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation II
Daes_2128	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
Daes_2128	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
Daes_2128	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
Daes_2159	PWY-5663	tetrahydrobiopterin biosynthesis I
Daes_2159	PWY-5664	tetrahydrobiopterin biosynthesis II
Daes_2159	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
Daes_2159	PWY-6703	preQ<sub>0</sub> biosynthesis
Daes_2159	PWY-6983	tetrahydrobiopterin biosynthesis III
Daes_2159	PWY-7442	drosopterin and aurodrosopterin biosynthesis
Daes_2186	PWY-7560	methylerythritol phosphate pathway II
Daes_2190	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
Daes_2205	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Daes_2205	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
Daes_2209	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Daes_2209	PWY-5723	Rubisco shunt
Daes_2212	PWY-5737	(5<i>R</i>)-carbapenem carboxylate biosynthesis
Daes_2212	PWY-6853	ethylene biosynthesis II (microbes)
Daes_2212	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
Daes_2223	PWY-5198	factor 420 biosynthesis
Daes_2223	PWY-7371	1,4-dihydroxy-6-naphthoate biosynthesis II
Daes_2223	PWY-7374	1,4-dihydroxy-6-naphthoate biosynthesis I
Daes_2224	PWY-5198	factor 420 biosynthesis
Daes_2276	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Daes_2276	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Daes_2278	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
Daes_2278	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
Daes_2279	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Daes_2279	PWY-5686	UMP biosynthesis
Daes_2279	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Daes_2291	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
Daes_2296	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
Daes_2302	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
Daes_2302	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
Daes_2303	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
Daes_2303	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
Daes_2303	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
Daes_2312	PWY-5686	UMP biosynthesis
Daes_2313	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
Daes_2321	PWY-6349	CDP-archaeol biosynthesis
Daes_2323	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
Daes_2336	PWY-1042	glycolysis IV (plant cytosol)
Daes_2336	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
Daes_2336	PWY-5484	glycolysis II (from fructose 6-phosphate)
Daes_2336	PWY-5723	Rubisco shunt
Daes_2336	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Daes_2336	PWY-6886	1-butanol autotrophic biosynthesis
Daes_2336	PWY-6901	superpathway of glucose and xylose degradation
Daes_2336	PWY-7003	glycerol degradation to butanol
Daes_2336	PWY-7124	ethylene biosynthesis V (engineered)
Daes_2336	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
Daes_2339	PWY-7183	pyrimidine nucleobases salvage I
Daes_2350	PWY-6936	seleno-amino acid biosynthesis
Daes_2366	PWY-6832	2-aminoethylphosphonate degradation II
Daes_2368	PWY-7560	methylerythritol phosphate pathway II
Daes_2377	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
Daes_2377	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
Daes_2437	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Daes_2437	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Daes_2456	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
Daes_2457	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
Daes_2457	PWY-6596	adenosine nucleotides degradation I
Daes_2457	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
Daes_2472	PWY-5381	pyridine nucleotide cycling (plants)
Daes_2472	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
Daes_2489	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
Daes_2489	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
Daes_2489	PWY-6269	adenosylcobalamin salvage from cobinamide II
Daes_2498	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
Daes_2498	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Daes_2498	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Daes_2499	PWY-5674	nitrate reduction IV (dissimilatory)
Daes_2507	PWY-5686	UMP biosynthesis
Daes_2508	PWY-6123	inosine-5'-phosphate biosynthesis I
Daes_2508	PWY-6124	inosine-5'-phosphate biosynthesis II
Daes_2508	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Daes_2508	PWY-7234	inosine-5'-phosphate biosynthesis III
Daes_2524	PWY-6749	CMP-legionaminate biosynthesis I
Daes_2544	PWY-5532	adenosine nucleotides degradation IV
Daes_2544	PWY-5723	Rubisco shunt
Daes_2545	PWY-5723	Rubisco shunt
Daes_2546	PWY-5484	glycolysis II (from fructose 6-phosphate)
Daes_2549	PWY-1042	glycolysis IV (plant cytosol)
Daes_2549	PWY-5484	glycolysis II (from fructose 6-phosphate)
Daes_2549	PWY-6901	superpathway of glucose and xylose degradation
Daes_2549	PWY-7003	glycerol degradation to butanol
Daes_2550	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Daes_2550	PWY-5723	Rubisco shunt
Daes_2551	PWY-1042	glycolysis IV (plant cytosol)
Daes_2551	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Daes_2551	PWY-5484	glycolysis II (from fructose 6-phosphate)
Daes_2551	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Daes_2551	PWY-7385	1,3-propanediol biosynthesis (engineered)
Daes_2552	PWY-1042	glycolysis IV (plant cytosol)
Daes_2552	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
Daes_2552	PWY-5484	glycolysis II (from fructose 6-phosphate)
Daes_2552	PWY-5723	Rubisco shunt
Daes_2552	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Daes_2552	PWY-6886	1-butanol autotrophic biosynthesis
Daes_2552	PWY-6901	superpathway of glucose and xylose degradation
Daes_2552	PWY-7003	glycerol degradation to butanol
Daes_2552	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
Daes_2552	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
Daes_2553	PWY-1042	glycolysis IV (plant cytosol)
Daes_2553	PWY-5484	glycolysis II (from fructose 6-phosphate)
Daes_2553	PWY-6886	1-butanol autotrophic biosynthesis
Daes_2553	PWY-6901	superpathway of glucose and xylose degradation
Daes_2553	PWY-7003	glycerol degradation to butanol
Daes_2554	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Daes_2554	PWY-5723	Rubisco shunt
Daes_2554	PWY-6891	thiazole biosynthesis II (Bacillus)
Daes_2554	PWY-6892	thiazole biosynthesis I (E. coli)
Daes_2554	PWY-6901	superpathway of glucose and xylose degradation
Daes_2554	PWY-7560	methylerythritol phosphate pathway II
Daes_2597	PWY-40	putrescine biosynthesis I
Daes_2597	PWY-43	putrescine biosynthesis II
Daes_2597	PWY-6305	putrescine biosynthesis IV
Daes_2597	PWY-6834	spermidine biosynthesis III
Daes_2625	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
Daes_2625	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
Daes_2625	PWY-6936	seleno-amino acid biosynthesis
Daes_2625	PWY-702	L-methionine biosynthesis II
Daes_2680	PWY-381	nitrate reduction II (assimilatory)
Daes_2680	PWY-5675	nitrate reduction V (assimilatory)
Daes_2680	PWY-6549	L-glutamine biosynthesis III
Daes_2680	PWY-6963	ammonia assimilation cycle I
Daes_2680	PWY-6964	ammonia assimilation cycle II
Daes_2690	PWY-6454	vancomycin resistance I
Daes_2690	PWY-6455	vancomycin resistance II
Daes_2706	PWY-5941	glycogen degradation II (eukaryotic)
Daes_2706	PWY-6724	starch degradation II
Daes_2706	PWY-6737	starch degradation V
Daes_2706	PWY-7238	sucrose biosynthesis II
Daes_2707	PWY-622	starch biosynthesis
Daes_2709	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
Daes_2709	PWY-5941	glycogen degradation II (eukaryotic)
Daes_2709	PWY-622	starch biosynthesis
Daes_2709	PWY-6731	starch degradation III
Daes_2709	PWY-6737	starch degradation V
Daes_2709	PWY-7238	sucrose biosynthesis II
Daes_2714	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Daes_2714	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Daes_2715	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Daes_2715	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Daes_2754	PWY-6167	flavin biosynthesis II (archaea)
Daes_2754	PWY-6168	flavin biosynthesis III (fungi)
Daes_2755	PWY-6986	alginate degradation
Daes_2763	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Daes_2763	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
Daes_2763	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
Daes_2770	PWY-1042	glycolysis IV (plant cytosol)
Daes_2770	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
Daes_2770	PWY-5484	glycolysis II (from fructose 6-phosphate)
Daes_2770	PWY-5723	Rubisco shunt
Daes_2770	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Daes_2770	PWY-6886	1-butanol autotrophic biosynthesis
Daes_2770	PWY-6901	superpathway of glucose and xylose degradation
Daes_2770	PWY-7003	glycerol degradation to butanol
Daes_2770	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
Daes_2770	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
Daes_2776	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Daes_2776	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Daes_2777	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
Daes_2777	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
Daes_2777	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
Daes_2778	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Daes_2778	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Daes_2780	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
Daes_2780	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
Daes_2780	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
Daes_2780	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
Daes_2781	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Daes_2781	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Daes_2782	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Daes_2782	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Daes_2793	PWY-1622	formaldehyde assimilation I (serine pathway)
Daes_2793	PWY-181	photorespiration
Daes_2793	PWY-2161	folate polyglutamylation
Daes_2793	PWY-2201	folate transformations I
Daes_2793	PWY-3661	glycine betaine degradation I
Daes_2793	PWY-3661-1	glycine betaine degradation II (mammalian)
Daes_2793	PWY-3841	folate transformations II
Daes_2793	PWY-5497	purine nucleobases degradation II (anaerobic)
Daes_2796	PWY-5367	petroselinate biosynthesis
Daes_2796	PWY-5971	palmitate biosynthesis II (bacteria and plants)
Daes_2796	PWY-5973	<i>cis</i>-vaccenate biosynthesis
Daes_2796	PWY-5989	stearate biosynthesis II (bacteria and plants)
Daes_2796	PWY-5994	palmitate biosynthesis I (animals and fungi)
Daes_2796	PWY-6113	superpathway of mycolate biosynthesis
Daes_2796	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
Daes_2796	PWY-6519	8-amino-7-oxononanoate biosynthesis I
Daes_2796	PWY-6951	Daes_2796|Daes_2796|YP_004122538.1|GeneID:10097423
Daes_2796	PWY-7053	docosahexaenoate biosynthesis I (lower eukaryotes)
Daes_2796	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Daes_2796	PWYG-321	mycolate biosynthesis
Daes_2797	PWY-4381	fatty acid biosynthesis initiation I
Daes_2806	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Daes_2812	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
Daes_2816	PWY-6167	flavin biosynthesis II (archaea)
Daes_2816	PWY-6168	flavin biosynthesis III (fungi)
Daes_2816	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Daes_2818	PWY-6167	flavin biosynthesis II (archaea)
Daes_2818	PWY-6168	flavin biosynthesis III (fungi)
Daes_2818	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
Daes_2819	PWY-6167	flavin biosynthesis II (archaea)
Daes_2819	PWY-6168	flavin biosynthesis III (fungi)
Daes_2835	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Daes_2835	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
Daes_2837	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
Daes_2837	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
Daes_2837	PWY-6269	adenosylcobalamin salvage from cobinamide II
Daes_2842	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Daes_2843	PWY-7183	pyrimidine nucleobases salvage I
Daes_2882	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Daes_2882	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Daes_2884	PWY-6823	molybdenum cofactor biosynthesis
Daes_2886	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
Daes_2924	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Daes_2984	PWY-6683	sulfate reduction III (assimilatory)
Daes_2985	PWY-6683	sulfate reduction III (assimilatory)
Daes_2988	PWY-7206	pyrimidine deoxyribonucleotides dephosphorylation
Daes_2992	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
Daes_3010	PWY-5194	siroheme biosynthesis
Daes_3010	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
Daes_3012	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
Daes_3013	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Daes_3013	PWY-5723	Rubisco shunt
Daes_3017	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Daes_3017	PWY-7205	CMP phosphorylation
Daes_3035	PWY-5278	sulfite oxidation III
Daes_3035	PWY-5340	sulfate activation for sulfonation
Daes_3035	PWY-6683	sulfate reduction III (assimilatory)
Daes_3035	PWY-6932	selenate reduction
Daes_3036	PWY-3461	L-tyrosine biosynthesis II
Daes_3036	PWY-3462	L-phenylalanine biosynthesis II
Daes_3036	PWY-6120	L-tyrosine biosynthesis III
Daes_3036	PWY-6627	salinosporamide A biosynthesis
Daes_3047	PWY-5392	reductive TCA cycle II
Daes_3047	PWY-5537	pyruvate fermentation to acetate V
Daes_3047	PWY-5538	pyruvate fermentation to acetate VI
Daes_3047	PWY-5690	TCA cycle II (plants and fungi)
Daes_3047	PWY-5913	TCA cycle VI (obligate autotrophs)
Daes_3047	PWY-6728	methylaspartate cycle
Daes_3047	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Daes_3047	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Daes_3048	PWY-1281	sulfoacetaldehyde degradation I
Daes_3048	PWY-5482	pyruvate fermentation to acetate II
Daes_3048	PWY-5485	pyruvate fermentation to acetate IV
Daes_3048	PWY-5497	purine nucleobases degradation II (anaerobic)
Daes_3048	PWY-6637	sulfolactate degradation II
Daes_3059	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
Daes_3077	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
Daes_3088	PWY-5344	L-homocysteine biosynthesis
Daes_3089	PWY-5350	thiosulfate disproportionation III (rhodanese)
Daes_3096	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
Daes_3096	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Daes_3096	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
Daes_3096	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
Daes_3096	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Daes_3096	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Daes_3096	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
Daes_3096	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
Daes_3107	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
Daes_3109	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Daes_3111	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Daes_3129	PWY-6599	guanine and guanosine salvage II
Daes_3129	PWY-6609	adenine and adenosine salvage III
Daes_3129	PWY-6610	adenine and adenosine salvage IV
Daes_3129	PWY-6620	guanine and guanosine salvage
Daes_3138	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Daes_3138	PWY-5723	Rubisco shunt
Daes_3138	PWY-6891	thiazole biosynthesis II (Bacillus)
Daes_3138	PWY-6892	thiazole biosynthesis I (E. coli)
Daes_3138	PWY-6901	superpathway of glucose and xylose degradation
Daes_3138	PWY-7560	methylerythritol phosphate pathway II
Daes_3139	PWY-5484	glycolysis II (from fructose 6-phosphate)
Daes_3147	PWY-5340	sulfate activation for sulfonation
Daes_3167	PWY-4381	fatty acid biosynthesis initiation I
Daes_3167	PWY-6799	fatty acid biosynthesis (plant mitochondria)
Daes_3167	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Daes_3168	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Daes_3175	PWY-2201	folate transformations I
Daes_3175	PWY-3841	folate transformations II
Daes_3195	PWY-5686	UMP biosynthesis
Daes_3196	PWY-5686	UMP biosynthesis
Daes_3229	PWY-7456	mannan degradation
Daes_3256	PWY-5674	nitrate reduction IV (dissimilatory)
Daes_3271	PWY-5833	CDP-4-dehydro-3,6-dideoxy-D-glucose biosynthesis
Daes_3272	PWY-5833	CDP-4-dehydro-3,6-dideoxy-D-glucose biosynthesis
Daes_3272	PWY-5940	streptomycin biosynthesis
Daes_3284	PWY-381	nitrate reduction II (assimilatory)
Daes_3284	PWY-5675	nitrate reduction V (assimilatory)
Daes_3284	PWY-6549	L-glutamine biosynthesis III
Daes_3284	PWY-6963	ammonia assimilation cycle I
Daes_3284	PWY-6964	ammonia assimilation cycle II
Daes_3324	PWY-5958	acridone alkaloid biosynthesis
Daes_3324	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
Daes_3324	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
Daes_3326	PWY-6123	inosine-5'-phosphate biosynthesis I
Daes_3326	PWY-7234	inosine-5'-phosphate biosynthesis III
Daes_3327	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Daes_3327	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
Daes_3327	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
Daes_3338	PWY-6700	queuosine biosynthesis
