        gltD NONE
        gltB    6335 ..    6371 +  -5.2   -3.1855   GTCTAACGATTGGAA    TCGGTTAGGAGAATTG CTTTA CTTTTTTTCTAACCGA    TTGAATCTTCAAGGG  48 40
   Dshi_0005    8970 ..    8981 +  -7.2  -2.69151   CGCGTGCAATTGCAG                CCCC GCGC GGGG                 TCGTCTATAGCCAGC  52 71
        dapD    9944 ..    9969 +  -2.5  -2.70354   CCTCGGCCAAGAACG         TGACAAACCTG AAGA CGGTTTTGCCA          TGGGTTTGTGGCGCA  39 114
   Dshi_0008   11722 ..   11746 + -13.5  -3.28712   CGTTCGAAATTGTCA          GCTCTGTCCCG AAA CGGGACCGGGC          TTATGCCAGCGCGAG  77 492
   Dshi_0011 NONE
       dapE1 NONE
        elaA NONE
   Dshi_0014   15308 ..   15345 + -13.3  -3.68351   CCCGTCGCCGGGGGC   GCGCGCTGCGCGCGCGCC TCT GGGGCCTGCGCGG-GCGC   TTTGCGTAATGAAGC  81 62
         rnr   17967 ..   17989 +  -9.1  -4.07885   TGTGCCCGGAGGGCA          TCGC-GCCGC GTGC GCGGCAGCGG           TTTTCGCCAGAAATC  76 265
       mltB2   19478 ..   19488 +  -2.4  -3.02511   AGGGCGCGCGGCCTG                 CTCC GGA GGCG                 TGTTGCACAGATGAA  41 77
   Dshi_0019   24891 ..   24908 + -11.3  -4.21827   AAAACGCAACGAAAA             CCTTCCC CGCG GGGAAGG              TTTTGGCGTCTTTCG  84 233
   Dshi_0022   26969 ..   27011 + -12.5  -3.66178   ATCGGGTCTTGAGCC TGCGGGCGGCGCGGGCGAC AGTCC GGCCCATGAGCCGCCCGCA TTTCCAGTTCGAAAC  77 40
        rnhB NONE
         dam   28880 ..   28902 + -16.3  -5.14563   GTGGCACGCGACTTG           CCCCGCCTG CCTGT CAGGCGGGG           TTTTTTCGTGCGGGG 100 86
       chrR2   29851 ..   29862 +  -2.2  -2.87132   GGGGTTTCCTCCGGG                TGGG GCGG CCTA                 TGTGTCGGACAACAG  40 62
   Dshi_0026   30661 ..   30680 +  -5.6  -3.28712   GGTCCAGTCAGCGTG            GCAGCGGCG TTT CGGCGC-GC            TTGTAGGGGCCCCAA  52 157
   Dshi_0029 NONE
       dsbA1   34348 ..   34358 +  -6.8  -4.21194   GCTCGGCCGGCAGGC                 GGAC GGC GTCC                 TTTTCGGTGGTCACG  72 183
   Dshi_0037   40243 ..   40261 +   -16  -3.82084   AACGCGACGATCCAG             GCCGGGGT TTT ACCCCGGC             TTCTTCGTGTTCGGG  93 52
        ribA NONE
   Dshi_0040 NONE
   Dshi_0041   43555 ..   43565 +  -8.2  -2.66329   CGTCGAAAAGCTCCA                 CCGC CGG GCGG                 GTCTTGTTGGATTGC  52 417
   Dshi_0044   45878 ..   45914 + -12.9  -2.71791   CTGTCGATGACTTCG    ACGAGGCTGAGCGGGCC GCG GGCCAGTTCGGCTTCGA    GTTTCGGCACGACCT  67 270
   Dshi_0046   47127 ..   47143 +  -5.1  -3.10499   CAACTTCGTAAACGT              TGCAGCT CAC AACTGCA              TGTGTTGCCCTGTTG  49 448
   Dshi_0049   49169 ..   49191 +  -8.4  -4.32804   CAAGCGCAACAGTTT           GCACCGGG GCGGACG CCTGGTGC           TTTTGAATTACTTCT  79 441
   Dshi_0053   51308 ..   51350 + -13.5  -3.05521   AGGAACGGAGCCGCG CCGAGGTCATCGGCAA-GCC GGGC GGCGTTGCGGGTGAACTCGG TCTTCAGGCTGTCCT  70 170
        ubiH   63678 ..   63699 + -12.3  -4.20368   AACGCGCTTCGAAAC           GCGTTGGAC CCGG GTCCGACGC            TTTGTCTTCAGGTGA  86 53
   Dshi_0066 NONE
        caiD   69079 ..   69096 +  -6.3  -3.62522   GGAGCAGGACACGGG             GCGCT-AG GGA CTCAGCGC             TTGTTGCAGGACTTC  59 19
        yccV   71490 ..   71519 +  -8.5  -3.28924   GCCTCGTTCGGGTGG       CCG-GGCGTGAGGT TGA ACCCTGCGCCGCGG       TTGTGGAACAGGATG  58 470
        thlA   74888 ..   74923 + -15.4  -3.61089   GGCGCCCGCCCCGAA    GGA-ACGCCGCGCCAGG GGT CCCGGCGCGGCCTCTCC    TTGTCGTTATTCGGC  86 41
   Dshi_0076 NONE
   Dshi_0077   76894 ..   76904 +  -4.6  -3.28712   ACGAGGTTGTGGCGC                 TGCG GGA CGCG                 TTCTAGGCGGCGGCG  50 9
   Dshi_0078 NONE
   Dshi_0079   79028 ..   79083 + -13.8  -2.53822   TGTCCGGCAGCAGCG GGCCGACCCGCG-GCATGGTCCCGGTT TCG GGCCGGGACCGGGTGCGCAGGACGGGC ATGTTGTCCGATACG  69 81
   Dshi_0086   86043 ..   86062 +  -7.2  -2.77416   CCCAAGTGCGGGCCG            TTGAGCGA AATG TCGTTCAA             TGCTATGTTGCTAGT  52 54
   Dshi_0087   86528 ..   86560 +    -9  -3.15544   AAGATGTGGATGACC     CCG-GCGGCCCAGGC CTGA GTCCGGGCCGGACGG      TTCATGAAAGTGACG  61 8
   Dshi_0088   87025 ..   87052 +    -4   -4.6856   AGGGACGCCGTATCA        CCGCGTGTAACG CGGG CGGTATGGGCGG         TTTTTCGAGTGTTTG  75 16
        ipgm NONE
   Dshi_0090 NONE
         prc NONE
   Dshi_0092   91672 ..   91703 + -15.8  -3.34029   CTGCGCGCGCCGCCG      GGGGGCGAGAGGGG CCAG CCCCTCTCGCGCGC       TTCTCGGGATATTTG  84 93
   Dshi_0101   99775 ..   99785 +  -5.4  -3.13403   CCCGACATTCCGAAC                 CTTG ACC CAAG                 TCTTCATGCCCGGCA  48 262
       dnaE1 NONE
        adhI NONE
   Dshi_0104 NONE
   Dshi_0105  105742 ..  105760 +  -2.2  -2.78816   ACCGTGGCTTTCGAG             ACCCCTGC GGC GCGGGCGA             TGTCGTCCACGCTGG  38 518
   Dshi_0107  106972 ..  106990 +  -6.6  -3.53343   TTGAGTGCCGCCTAG             GCCAGCGC GGC GAGTTGGC             TTTCGAGGCGGAGTT  57 37
   Dshi_0109 NONE
   Dshi_0110  109583 ..  109604 +  -7.1  -3.45366   GGAAAAGGCGTCAGG           CGGGCAGCG GGCT CGCGGGCCG            TTCCTTGATTGGCAA  57 121
   Dshi_0112  112272 ..  112296 +  -6.9  -3.14132   GATGCCCGCATCTGC          GGCCCCGGTCG CCT CGCCCCAGGCC          TTCATGACGAAGGGA  52 294
   Dshi_0114  113825 ..  113846 +  -3.7  -2.52464   CTCAAGGATCTGATG           CGGGC-ATGA GGA TCATCGCCGG           TCGGTTCGGAGGGCG  41 17
   Dshi_0115  114499 ..  114509 +  -8.2  -3.41795   CCTGAGCAGTTATGG                 CGGG CGC CCCG                 TTCTCCTGCGGCTTT  63 137
        mogA NONE
   Dshi_0120 NONE
   Dshi_0121 NONE
   Dshi_0122  121187 ..  121203 +  -5.1  -4.56597   ACCCTGAGCCGCGCT              CAGGC CGACATC GCCTG              TTTTTCAGCCGAGAA  74 34
         abi  129703 ..  129719 +  -4.3  -3.48276   GACCCGCTGATTGCA              TTTCCGC GCC GCGGCGA              TTATCTCGAACCCAA  51 31
        accD NONE
        folC NONE
   Dshi_0133  133049 ..  133076 +  -4.9  -3.14881   CGGCGCGCATGCCGC        GATGG-CGGCCT AGGCG AGGTTGTCCATC        TTGCTGGCGAGCTTG  48 13
   Dshi_0140 NONE
       ttg2D  140912 ..  140930 + -11.7  -3.44051   CAGCCCGCCGCCGGT             CACGCCC GTCAG GGGCGTG             TTATCGTCATAGCCC  70 408
        glnK NONE
        amtB  144911 ..  144933 +   -17   -5.0916   TCAGCCTGACCAACT           TCCCGGGCGG TCT TCGCCCGGGA           TTTTTCTCTTCAACG 100 53
   Dshi_0150  151367 ..  151382 +  -6.2  -3.14132   CCGGCGCGCGCCCAA              GGATTT TCGA AAATCC               TTGCTCAGCGCGCCC  51 43
         dao  154244 ..  154259 +    -9  -3.29144   TCAGGCCCCGTCCAA              GCGGTT TCGA AACCGC               TTCTCCGCCCGGTGA  63 176
        lrgA NONE
        lrgB NONE
       cobA2  157415 ..  157451 + -12.2  -3.62775   GCGCTCAGCGGTGCC   CGGGGCGGG-GCCGTGC CCCG GCGCGACATCCGCCTCG    TTGTTCCAACATCCT  75 218
         smc  168180 ..  168194 +  -2.1  -3.61398   CCAGGCATCTGCGGG              CAG-GC CGAG GCGCTG               TTGTTCGGCGCGGAC  48 290
   Dshi_0168  172294 ..  172307 +  -5.3   -4.0896   CAGCGCGCAGCAAAA               CTCTT GAGC AAGAG                TTTTGCCAAGGATTT  63 72
   Dshi_0170 NONE
       cbiX2  175145 ..  175177 +  -3.9  -3.36968   CGAAAGCGCGCGCAA      GACCGTCCGCACCGC AGA GTGATGCGCAGGGCC      TTCTGCAGTTACCTA  48 4
        cobH  176775 ..  176798 +  -7.4  -2.77658   CGCGCGGGGCCCGGG          CGGTG-GGTCG CCA TGACCGCGCCG          TGGTTGCATATCGTC  52 96
        cobL NONE
        cobI NONE
        cbiG  180520 ..  180566 + -12.9  -3.02829   TGCATTCGATATTTC GCCG-CGCGTGGCGGGC-CGGGA CGC TCATGGGCCCGCGTCGCGGCGGC TGTTCACGGGGTGTG  71 62
        cobM  181361 ..  181389 +  -2.9  -3.36273   ATGTGCTGCGCCCCC        GCGCGCGGAAGAC GGG GTCCTAGTCGCGC        TTGATCTTGGCGGCG  46 3
   Dshi_0177  181830 ..  181842 +  -6.2  -3.14564   CGAAAGCGTCGGCCA                GCCG GTCCA CGGC                TTCCTGAACCCGTGC  51 58
        def1  183619 ..  183635 +  -2.1  -4.82901   GGGCTGAATCGGGCG              GTCGGCG CGG CGTCGGA              TTTTTGTCGGGCACG  74 34
        def2 NONE
         fmt  185143 ..  185158 + -10.4  -3.14463   GAAATCGCGTTCCAA              GCGCCT TGCA AGGCGC               TTGATCAAGGCGCTT  64 83
   Dshi_0189  191672 ..  191689 + -12.7  -3.11732   CGCCTCGCGTGACAA             GACCCGC CGCA GCGGGTC              TTGAGTGAGTTTCAC  69 509
        hppk  192987 ..  193001 +  -4.2  -4.12942   TGAGTAAGCCTGTTT               CGCCTT GTC AAGGCA               TTTTGCACGCTTTAC  63 34
        rpoZ  193413 ..  193427 +  -4.2  -3.14211   CAAGGCCAGCCGTGA               TCTCGT GCC GCGGGA               TTCGTCGGACAGCCT  47 26
        relA NONE
   Dshi_0195 NONE
        pdxJ  197035 ..  197057 +  -4.1  -2.71483   GCCGGATGGACGCCG          CCCGC-GC GTGAGCTG GCTGCGGG           TGATTGCGGGGCTGT  42 15
   Dshi_0197  197776 ..  197790 +  -5.6   -3.5594   TGTCTCGCGGGCCCT               TGCGCC GCA GGAGCA               TTTGGCGCATCACTT  57 97
        acpS NONE
        lepB NONE
         rnc NONE
         era NONE
   Dshi_0202 NONE
        recO  201989 ..  202000 +  -7.2  -3.01712   GCGTCGCACAGGATG                CGGC TGAT GCCG                 TATTCCAGGGCAAAG  51 175
   Dshi_0205  204996 ..  205021 +  -3.1  -4.82901   CCGCGGCCAAGTGGG         CCATGGCCTGC TTGC GCATGTCGAGG          TTTTTCTGCAGCGCA  75 386
        pckA  212032 ..  212053 + -15.9  -5.03994   CCCGCCCAAGACAAA           GCCCCGTTC GGCA GAACGGGGC            TTTTTGTGTCTCAGG 100 49
   Dshi_0215  214046 ..  214066 + -11.1  -4.56978   GCCAGGCGAAAAAAA            GCCCCGC GCGGCAG GCGGGGC            TTTGTTCTTTCCGGG  95 47
        parC NONE
   Dshi_0222 NONE
       tufA2  222124 ..  222144 + -16.1  -4.72272   CGAAGAAACGTTTAA            GGGGGTGCG GTT CGCGCCCCC            TTTTTCATGCGCGAA 100 51
   Dshi_0225  224321 ..  224331 +  -3.2   -4.4078   GTGGTCAGCCCTGCT                 TGTC GGT GACG                 TTTTCCTTGAAGGCG  67 160
        pykA NONE
   Dshi_0229  227468 ..  227480 +  -3.3  -2.80816   GCCAAAGCTCTTGCC                AAGCG CTC CGCTC                TGTCGTACCTGCGCG  40 273
        rpmI NONE
        rplT  228170 ..  228191 + -12.9  -4.77438   GTCCCAAACCGATCG           GGCCGCACC TTCG GGGGCGGCC            TTTTTCGTGGTCCGT 100 50
   Dshi_0232 NONE
   Dshi_0233  231513 ..  231526 +  -3.1  -4.17132   AACCTCGTCTTCTGA               GCG-GA TGT TCGCGC               TTTGTTAGGGGCTTT  61 26
   Dshi_0234 NONE
        pheS  233811 ..  233838 + -15.5  -3.53012   CCGCAGGCCCGGGCA        GCGCCCGACCG CCCCCC CGGGCGGGCGC         TTTCAGCGCGACACC  85 54
   Dshi_0236  234393 ..  234407 + -12.8  -3.50456   GCCTGCCTCGTCGTC               CCGGCC CGG GGCCGG               TTAATATTTCGTTAA  76 208
        pheT  237101 ..  237124 + -15.4  -2.53263   CCGGTCCAGAGCACC          CCAAGCGGTT TCGA AACCGCTTGG           TCGCTTGCGGCTGAC  76 159
   Dshi_0238  237951 ..  237966 +  -3.9  -3.63073   GGCCAATGCCAGCGT              CGCGG CCACAT TCGCG               TTGTTGGGAAATCTC  54 252
        mscL  239778 ..  239824 +  -4.6  -3.57792   ATAACAAACTGGAAA GCTATG-CCATGGCACG-GTC GGTGAAAG GACGCGTGCCATGGACCT-GC TTTCGAACTACCTGC  55 74
   Dshi_0242 NONE
   Dshi_0243  242123 ..  242164 + -14.4  -3.01791   AGGGCAGGGTCGCAT TGCCCAGCGCGATGGT-CG AAGTC CGTGCCACCGCGCCGGGCA TATTCGCCACGCAGT  72 208
        asnC  243802 ..  243833 +  -5.9  -4.30719   CGTGCGAGTTTACGG     GCACGGCGA-ATGGC TTCT GCCTTCTCGC-GTGC      TTTCTTCTCGGAGGG  73 163
   Dshi_0247 NONE
   Dshi_0248  245931 ..  245946 +    -9   -3.1505   GGCCGGGGCGTGCAA              GCGGTT TCGA AACCGC               TTGGTGGCGCGTCGT  61 177
   Dshi_0252 NONE
   Dshi_0253  253081 ..  253101 +  -2.4  -4.18934   GTAATCGGCCGCCGA            CAGGCCCG AGCAG CGGCCGTG            TTTCTTCCACTGGTG  62 347
   Dshi_0255  254364 ..  254385 + -15.1  -4.39407   GCCTTGCGAGACAGG           GGCGCGTCC TGCG GGGCGCGCC            TTTTGCGTTATTTGG 100 49
        secE  256560 ..  256590 + -10.4  -4.55798   CCACCATCCCAACCC       GTAGCGTGCGTC GATTCGA GCCGCACGCTGC       TTTTCATTTGGGGTG  95 114
        nusG  257266 ..  257288 +  -7.7  -2.62184   CCACGAGCACCCCTG          TCCGG-CCGC CGCG GCGGTTCGGA           TGCTGTAAAAGGAGA  51 85
        rplK NONE
        rplA  258458 ..  258477 + -12.8  -4.77157   GATGATGCGGAATTC            GGGCGGCC TTCG GGTCGCCC             TTTTTCGTGGGTTGG 100 48
   Dshi_0262  259543 ..  259562 + -16.4  -3.59979   CCGCGAAGATCGACA            GGGCGGCC TGCG GGCCGCCC             TTTCGCATGAGCGCC  91 52
        fkbM  260414 ..  260434 +  -2.5  -2.73124   ATGGTCCGATCCGGA            CCCGG GGTGCGATTAA CCGGG            CTTTAGGGGCTGGCA  39 10
   Dshi_0264  261606 ..  261633 + -11.9  -3.21099   CTATCCGGCACCCGA        CGGGGCATGCG TGGATT CGCGGGCCCCG         TTCGTCGTCCGAGAC  70 89
        rplJ  262358 ..  262368 +  -2.4  -2.78996   CGAAGCGGCCTGATC                 CGCG ATA CGAG                 ATTTGCGTGAGGATG  39 28
        rplL  262834 ..  262854 + -16.1  -5.15634   TTCCGAATTATCAAA            GGGTCGCGG TCT CCGCGGCCC            TTTTTTCGTGCGATC 100 51
   Dshi_0267  264605 ..  264663 + -11.2  -3.66178   CCGGGTCCGGCAAAA CCT-GTCTTGGCAAGCCGCTTG--GGTGC TCGC GCACCGGCGAGCGGCTTTCCCAGATGAGG TTTCCGGTTCGGGCG  73 336
        rpoB  268962 ..  268977 +  -6.2  -3.53091   AAAACTCTTGGCAAA              TTCCTT GCTC AAGGAA               TTTGCGCCCGCACCT  55 64
        rpoC  273308 ..  273330 + -17.7  -4.05446   GGCCGACGACCCTTG           CCCCCGCGC CCCGT GCGCGGGGG           TTTCTCGTTACGCCC 100 65
   Dshi_0270  274488 ..  274519 +  -9.3  -4.61566   TCCTCTGGAATTCCA      CCGC-GTCGGTCCC GCGAA GGGTCCGTCCGCGG      TTTTGTGCTTTGCGG  91 189
        rpsL NONE
        rpsG NONE
        fusA NONE
       tufA1  278909 ..  278931 + -10.5  -2.65815   CGACAGGTTCGACGA           GGGGTGGCG TAACC CGCCGCTCC           TCCTCTCAATCTCAA  59 73
        rpsJ NONE
        rplC NONE
        rplD NONE
        rplW  281081 ..  281111 + -17.7  -3.13177   CTCCATCCTGATTGA      GAAGCCCCGGTCCT GAAC AGG-CCGGGGCTTC       TTGCATCTGGGGTGT  91 65
   Dshi_0282  283773 ..  283784 +  -2.2  -3.14132   GAAGGCGCGCCTCGA                TCTG TAGG CAGG                 TTCCTCGCGGAAAGG  43 61
   Dshi_0283  284322 ..  284352 + -13.2  -3.13343   AGGTGCCGGGTTTTC       TGCCTGGCGTGGGC GTC GTGCCCGCCAGGCA       TTCCGTCATTACGGT  73 227
   Dshi_0284  285146 ..  285164 + -13.1  -4.65895   TGACGACGGCTCAAA             GCCCCGC TTCCT GCGGGGC             TTTTTGCGTGGCGGG 100 58
        rplB NONE
        rpsS NONE
        rplV NONE
        rpsC NONE
        rplP  288160 ..  288182 + -17.7  -4.84527   CTTCCGAGTTTCAAG           GCCCCCGCC TACAC GGCGGGGGC           TTTTTCGTCTCTCCC 100 119
   Dshi_0290  288695 ..  288706 +  -2.2  -5.07011   CCATGCAAATCGACA                TGCT CTTG AGCG                 TTTTTACTTTCTATA  77 273
        rpmC NONE
        rpsQ  290728 ..  290739 +  -5.8  -3.86015   TCGCCAACTGAGGCA                TCGC TTTC GCGA                 TTTATCGAAACCCTG  62 30
        rplN  291148 ..  291160 +  -6.9  -2.80816   AAGATCATCTCGCTC                GCGCC GGA GGTGC                TCTGATGGCTGCGAA  49 8
        rplX NONE
        rplE NONE
        rpsN NONE
        rpsH NONE
        rplF NONE
        rplR  293681 ..  293712 + -15.2  -3.57792   GGCCTGAAGTTCTGA      GGTG-GGGCCGGGGA CGA TCCCCGGCCTGCATC      TTTGCCACTCGGTCG  86 26
        rpsE NONE
        rpmD  294623 ..  294649 + -11.5  -3.53712   AGGGCTGAGGCCCCG         GGTCGGCGTCC GACAA GGCCGCTGACC         TTCCTTGTTCCGCGT  71 33
        rplO  295279 ..  295315 + -21.6  -3.14931   CTAGCATCAGTTTTC    CAGCGCCGCCTGACCG GGAAA CGGTCCGGCGGCGTTG    TTCATGAGACGTCCC 100 73
        secY NONE
         adk  297500 ..  297520 +  -8.2  -4.48987   GAGTCGCCGGGTCGG            GCCCGTGG AGACC CCACGGGA            TTTTGGTTGTGAAAA  84 183
        rpsM NONE
        rpsK  298368 ..  298400 + -20.6  -3.11832   GCGTACACATTTTCC      CCGAGGGCCGCGGG TTTTT CCCGTGGCCCTTGG      TGTCATTTATTCCTC  95 41
        rpoA NONE
        rplQ  300050 ..  300066 + -15.1  -5.28481   CTGGAAAACAAAAAA              CCCCGCC ATT GGCGGGG              TTTTTTAGTTGGCTC 100 54
       luxR1  300974 ..  300990 +  -2.1  -2.52623   ACTACAGGCTGCTAT              AGGGGTC TTT GGCCTCG              GTCTTCTCGACCCAC  37 24
        luxI  301750 ..  301777 +  -8.2  -3.53012   ATGTGCGTCCCCCTC        GCACCGCGCCCC GCAG GGGGCGCGCCCC         TTTCCGGCCGCGGGC  63 156
   Dshi_0313  303186 ..  303201 +  -6.8  -3.33261   GGCGGCGCGGTCGGG              GCCAGT TTGC GCTGGC               TTCTGGGCGTTGGCG  55 102
   Dshi_0314 NONE
        rluC NONE
         gph NONE
   Dshi_0317  306173 ..  306188 +  -4.7  -3.88291   ACACTTGACGTTATT              TTGGG GAAATG CCCAA               TTTGTGACGCTGGTG  60 256
        bztA  307323 ..  307344 + -17.3  -4.99134   AGCGGGGCACAGATT           GGGCGCAGG ATTT CCTGCGCCC            TTTTTCGTTTACGAT 100 40
        bztB NONE
        bztC NONE
        bztD  310776 ..  310795 + -16.4   -4.0162   CCGGCATCGCGCGAA            GGCCCCGG CCCC CCGGGGCC             TTTGTCATGTCCGGG 100 45
       fabG3  314007 ..  314032 +  -7.5  -3.85698   GTGGGCCGCCCGGTC         AGGTAGGCCTT GAGC AGGGCCTGCCA          TTTCTGCACCACCGC  66 377
   Dshi_0338  327653 ..  327673 +  -8.9   -3.0395   TGGCGCCGTGCGCCC            TCGCGCGTC AGC GGCCCGCGA            TCTTGCGCCGTATCT  57 226
         aph  331732 ..  331754 +  -6.8   -3.7732   CCTTGTTGCTCACGC           CGGTCAGCCG CCC CGACAGGCCG           TTCTTGATCTGCCCG  64 356
        lysR NONE
   Dshi_0356  340487 ..  340508 +  -7.9  -2.79501   GCTGGGACAGCGGGC           CCGTGCGCCG GTG CGGCCC-CGG           TGTGGTCCCGGTGTG  52 408
        purH NONE
        lspA NONE
   Dshi_0360  343358 ..  343370 +  -6.2  -2.62111   AACCAAGGATGGAGA                CGCG AATGA CGCG                ATGGTTTTTTCCGCG  46 104
       pqqL2 NONE
       pqqL1  346038 ..  346093 +  -8.9  -2.82933   GCCTCCAACTAGCCC TAGGCGACTCGGCGCGGTCATGCTAC ATCCG GTGGCATGTCCGCGCCCAACC-CCAA TATCATGCCTTCGCA  55 29
        mutL NONE
        rmuC  349571 ..  349593 +  -6.8  -4.00476   GCGGGCTGGGGAAGA           CGGAGCTGCG CGG CGCGGACCCG           TTTGTCATGGATTTG  66 428
   Dshi_0367 NONE
   Dshi_0368 NONE
   Dshi_0369 NONE
   Dshi_0370 NONE
   Dshi_0371 NONE
   Dshi_0372  355730 ..  355744 +    -7  -2.65271   TCATGCGCCGATGAC               CCCGGC CCG GCAGGG               TCCTGTCACATTATA  48 27
       fadD3 NONE
   Dshi_0374 NONE
        livG NONE
        livH  360517 ..  360552 +  -8.2  -3.34398   GCCTGCGCGCCGGGC    CTTGCCGCGGTGCAGA ACCA TCTGGGCCGGGCCAAG     TATTTGCCGCACCGG  60 435
   Dshi_0378  360979 ..  361017 + -14.5  -5.00616   CATGACCATTCGCAT  C-ACCGCCCGTGGGGCCC GTCG GGGCCGCGCGGGCGTTCG   TTTTTTCGCGGGGGG 100 75
        livM NONE
        livK  363480 ..  363493 +  -4.5  -3.14132   CTGATACCGAAACCC               CG-GCC CGG GGCGCG               TTGCTCCGGGCCGGG  47 37
       livF1  364456 ..  364468 +  -9.1  -3.65902   AACCCGACAACGCGC                CGGAG GCG CTCCG                TTTGAGTGCCCTCCG  68 126
        paaK  365819 ..  365834 +  -6.1  -2.52464   CGGAGGCAAGACGCG              CTGGC CATTCT GCCAG               TGCCTTGCCGAAGGA  45 112
   Dshi_0383  366428 ..  366460 +   -17  -5.24129   GGGGTCGGTGCTGCG     TGCGCTCCCGGTGGC TCAG GCC-CCGGGGGCGCG      TTTTTTCTGGCGCAG 100 132
        dinB  368224 ..  368235 +    -3  -4.57341   CTGAGCGGGCAAAAA                TCTT GCGT AAGA                 TTTTTGACAAGGATT  69 37
        rpmJ  369591 ..  369611 + -10.4  -5.04325   CATCGAGTGACGAAG           CCGCCGCGG GACA CC-CGGCGG            TTTTTGTCATTTGGC 100 60
   Dshi_0391  382271 ..  382288 +  -2.5  -2.52676   GCCCCGCCGCAGCGA             AGGTCGG CTTC CCGCCCA              TCAATTCCAGCGGTA  37 106
   Dshi_0400 NONE
   Dshi_0401 NONE
   Dshi_0402  396330 ..  396342 +  -3.3  -5.19261   GCTCGGAAGAATCCA                GAGCA GCT TGCGC                TTTTTTGATGAATTT  82 5
   Dshi_0403 NONE
   Dshi_0404  399205 ..  399217 +  -5.5  -3.68351   AGATTGACCCTCGGC                CTGTC ATC GACGG                TTTGAATCGTCACAA  60 142
   Dshi_0407  402434 ..  402488 +  -8.5  -3.28712   TTGAAAGAGTAAGGA GGTTCGCATGGTGAAGATGATCCGTG ACAA CACGGGCCG-CTTTGCCGAGCGACCC TTCTACCGCGAGCGG  60 29
   Dshi_0408  403173 ..  403184 +  -3.6  -4.21792   CCCTGATCGCGAATC                CGCG GAAG TGCG                 TATTTTTTCGATTGT  61 35
   Dshi_0409  404377 ..  404414 +  -7.5  -2.87881   TGTAGCGGCCGAAGT   AGAGCGCGCGCCGGT CGCCGATT GCCGCCGCGCGCACA    TCTGTCGCGAAGTTA  52 490
         fas  407794 ..  407822 + -17.4  -3.48395   TCATCTGAAGCAATA        TCGGCGGCCTCG CAATC CGGGGCCGCCGG        TTATCTCGGGCAGAT  93 33
   Dshi_0413  408339 ..  408364 +  -6.7  -4.56597   CTGAGCTTCGCCCTG         CGCCCAAGCGA TAGT TTGCAGGGGCG          TTTTTCCCAAGCGGC  78 169
   Dshi_0415  409484 ..  409501 +  -2.5  -4.26903   GTGCTCATGAAATGC             CGGGGCG AAAC CTCCCAG              TTTTGATAAACTCAA  62 247
   Dshi_0416  409948 ..  409968 + -12.5   -3.2496   TGCCATGATCCGGCG            GGGCGGCCA CCC TGGCCGCGC            TTCCATTCTCGCTTC  73 54
   Dshi_0417  410223 ..  410259 + -18.8  -2.71712   GACGGCACTCATCGC   GCACCGCGGC-GGCTTC TGGG GAAGCCTGCCGCGGTCC    ATTTGAGCGAAGGAA  87 39
       uspA2  411325 ..  411340 +  -2.5  -3.01712   CTGAGAGACCTTCTC              GCG-CC AGTGC GGTCGC              TATTGACGGCCACGG  41 173
   Dshi_0419 NONE
   Dshi_0420 NONE
   Dshi_0421  415054 ..  415079 +  -6.1  -3.72893   GGGGCAGGGGGGGGC         TGACCGGGATCG CGC CG-TCCCGGATA         TTTGATGCCGCGGTG  60 100
   Dshi_0422  416043 ..  416061 +  -5.9  -3.03028   GCCATCATCGAGTGA             CCGCTGG GGAAA CTGGCGG             TGTATATGGCTGTTT  49 383
   Dshi_0424  417838 ..  417865 + -10.6   -2.7395   GCCGATCCCCAGGGG        CGCTATGCCTCCG GCG CGG-GGTATGGCG        ATTTCGAGGATCTGT  60 297
   Dshi_0426  418851 ..  418881 +  -7.5  -3.04248   ACCGAGCGCGGCTGA      GCCGCGCG-G-GCCG GGC CGGTGCGCGCGCGGG      TGTTAACCGGTGTTA  54 26
   Dshi_0427 NONE
        phaC  421384 ..  421395 +  -7.2  -3.73072   TGAGGGCGTCGAGCC                GGGC CTCG GCCC                 TTTCCTGCCGGCCTT  61 257
        dcuC NONE
        arcA NONE
        arcB NONE
        arcC  426929 ..  426948 +  -7.1  -3.06261   CGATGGGAAGACCAG            TTCGCGG AGAGCG CCGCGGA             TGTTGCCCGTTCCGC  51 91
       atpD1 NONE
       atpC2 NONE
   Dshi_0437 NONE
   Dshi_0438 NONE
       atpB2 NONE
       atpE1 NONE
       atpF1 NONE
       atpA2 NONE
       atpG1  433685 ..  433712 +  -3.2  -3.60296   TCGGATCAGGGGCGT        TAACCCGGATCG ATGA CGTGCCGGGGTG         TTTGACCTAGGGATG  51 23
   Dshi_0444 NONE
   Dshi_0445  434444 ..  434487 +  -2.3  -2.58579   CTCGGTTTGATTGGG GAGGGCCG--GGGTCGTGCGG ATGT CGGCCCGGTTCGGCGGCTCTC ATTGTCCCAGGTTAA  38 31
   Dshi_0446  435366 ..  435399 +  -7.4  -3.13403   CGCAGCCTCGCCATC     TCCGGCTCGGGGC CGTTGACTC GCCCCG-GCCCGA     TATTGATGAAGCGCG  54 412
   Dshi_0448  437747 ..  437762 +    -4  -2.68015   ACACCGCACACTACC              GC-CGAT GAC ATCGCGC              CTTCTGATCGTTGAG  41 76
   Dshi_0449  438477 ..  438488 +  -4.4  -2.88663   ATATAAGAGTCGCCC                GAGA CATC TCTC                 TCTGTCAGGCTGACT  44 68
        pqqA  438645 ..  438678 +   -11   -2.5294   GTTCTGAGACACTTG     GCGCGCGGCATG ATGTGAATGG CATTCCGCGCGC      ATATTCTGGGGGCTG  62 34
        pqqB NONE
        pqqC NONE
        pqqD NONE
        pqqE  441985 ..  442005 +  -5.3  -3.05597   CCGGAAAAATTGGAC            GTGGGCGGG ATG CTCCCCTAC            CTTTTCGACACTGGA  47 324
   Dshi_0455 NONE
        moxR NONE
   Dshi_0457 NONE
   Dshi_0458  445250 ..  445260 +  -4.6  -3.96618   GACGCTCGAAGCCGA                 GGTG GCG CGCC                 TTGTTTGAGCTTGCC  63 7
   Dshi_0459 NONE
   Dshi_0460 NONE
   Dshi_0461  447783 ..  447804 +  -2.2  -3.45743   CAAAAGCGGAGGATC           CGCGATGA AGTGGC TCCTTGCG            TGTCTTTTAATGCTG  47 18
   Dshi_0462  448967 ..  448983 +  -2.2  -2.96452   TCGTTCGATCCTTTG              TCGCGG CGAAA TCGTGA              TATGGTTCTAAGAGT  40 9
   Dshi_0463 NONE
   Dshi_0464 NONE
       luxR2 NONE
   Dshi_0466 NONE
   Dshi_0467 NONE
   Dshi_0468  455162 ..  455182 +  -3.1   -2.7782   TGAACGGCTCGACGT            GGCGCGATG AAA CAACTTGCC            CTTCTTGCCGCCTTG  40 16
   Dshi_0469  455529 ..  455556 + -14.9  -4.18018   TCTGACAGATGGAAA        GCCGCCGCTACC CTGGC GG-AGCGGCGGC        TTTTGCGTCCCGGAA 100 36
   Dshi_0471  457736 ..  457754 +  -5.2  -3.37487   TTCGAGGGCGTCGAT             CACATCGA AGT TCGGTGCG             TCTTTCGCCATCTCG  53 204
   Dshi_0473  459455 ..  459470 +  -6.8   -2.5805   ACAAAGGCGAATCCA              TCCGCG CAGT CGTGGA               GTTCTGAGGGGTGGT  48 3
   Dshi_0474 NONE
        cytC  460821 ..  460836 + -11.8  -4.17048   GCGAGCATCGCTTTC              GCGGCG AGAC CGCCGC               TTCTTTTGGGAGGAA  86 117
         gcd  462681 ..  462712 +   -16  -2.54387   GAATGGTTTTCCTAG      TGTGTTGGCGCATT GAGA GATGCGCCAACACG       TCGCTTCAACCTTTA  80 47
        cccA NONE
   Dshi_0478 NONE
   Dshi_0479 NONE
   Dshi_0480  465972 ..  466002 + -13.2  -4.43213   GCTACAATTGATGCC       GAGCCCGCCGGGTT CTG AGCCCGGCGGCGTC       TTTTCCTGTGTTCGG 100 30
   Dshi_0483 NONE
   Dshi_0484 NONE
   Dshi_0485 NONE
   Dshi_0486  470905 ..  470944 +  -5.6  -3.61894   GGACATACTTGAAAC  G-CGACTCGTGCTCGGGTT TAG GGCAGGGGCACGGGTCGAC  TTCTTCCACCACCTT  57 47
   Dshi_0490  476072 ..  476082 +  -8.2  -3.05819   CAGCTGCCAAGGCCC                 GGCG CGG CGCC                 TGTTCCACCTATGTC  57 101
       ssuA1  477128 ..  477158 + -10.3  -2.52623   CTATCTGTAACCTCT       CGCGCGGGACGGC CCCCA GTCGTCCCGCCCC       CTCTTCTCAGGCAGG  59 31
       ssuC1 NONE
       ssuB1 NONE
        nnrS NONE
   Dshi_0495  480580 ..  480590 +  -2.4  -4.07568   GTCCTGACGCTACTC                 CTGG CTC CCCG                 TTTTCCAACCGGAGC  57 108
   Dshi_0497 NONE
   Dshi_0498 NONE
   Dshi_0499 NONE
   Dshi_0500 NONE
   Dshi_0501  486322 ..  486334 +  -6.3  -3.14931   AAACGCCTGAAACTG                TGGAA TCG TTCCA                TTCGTAAGCGGTGCC  53 83
        torD NONE
   Dshi_0503 NONE
        fdnG NONE
        fdnH NONE
        fdnI  491934 ..  491972 + -22.4  -2.59475   GCGGAATGAACGCTT   GGCTCGCCCGGCGCGGTA CAT TTCTGCGCCGGGCGATCC   GTTCATGTCTCCCTG 100 32
   Dshi_0507  493154 ..  493164 +  -8.2  -2.83747   GAAAGCCTTCCTTCT                 CGCC TGT GGCG                 TCGTTCTCGGCATTG  55 46
   Dshi_0508  494537 ..  494549 +  -5.5  -2.74322   CACCCGGTAACTCAA                GTCAC ATG GTGGC                GTTTGAAGACTTCCA  46 31
        mtnK NONE
        mtnA NONE
       deoR3 NONE
        fucA NONE
   Dshi_0524  510011 ..  510027 +  -5.7  -3.01712   CCCGTTTCGCCACGG              CGCGCTC CTT GGGCGGG              TGTTGCCAAGAGAGG  49 62
   Dshi_0525  510622 ..  510639 +  -6.9  -3.85698   TGATGCCCTGAGCGC             CAGGCGC CCTA GCGCCTA              TTTGTCCACGGCGGC  65 38
       deoR2 NONE
   Dshi_0533  518863 ..  518879 +  -4.4  -2.62184   CTTTTTGCGCAACAA             GGCGCGT CAAT ACG-GCC              TCATCTGACCGAACC  41 1
       pdhA2 NONE
       pdhB1 NONE
       pdhC2 NONE
   Dshi_0537 NONE
   Dshi_0538  524840 ..  524850 +  -8.2  -3.36515   TCAGACGCCCCGTGC                 CGCC CTC GGCG                 TATTTGCCCGTCAAA  60 350
   Dshi_0540  526296 ..  526324 +  -4.6  -2.69151   GGGTGCATCCGTGGC       TTTTCGGGGTCAG TCCA CTG-CCCTGATAA        TGGTGTGTCGCCAAC  44 0
       hemN1  527934 ..  527949 +  -5.4  -4.08706   GCTCTGCACTTGAAC              CGC-CCA GTC TGGAGCG              TTTGTGTCATGGGGG  63 139
   Dshi_0543 NONE
   Dshi_0544  532109 ..  532123 +  -7.1  -3.68529   GTTTTTGGCTGTTGT               GCTGC GGTAA GCAGC               TTTGCCTGATCGCCT  62 43
       ugpB4 NONE
       ugpA1  536336 ..  536350 +  -2.8  -3.55563   AAATCTACATCCGCG               TCTTCT ACA AGGAGG               TTTGAGCCATGACAT  51 6
       ugpE4  537158 ..  537188 +  -3.3  -3.17542   TTGTCCGCGGATTGA      CGATGGGAGCGGTC AAAT GATC-TTCACATCG       GTTTTCCCTGTTCTG  44 6
       deoR1 NONE
        xylD NONE
   Dshi_0552 NONE
   Dshi_0553  540765 ..  540784 +  -4.2  -4.74012   AGCGGAAATCCCGCT            GGTGCGCA ATTC TGCCCATC             TTTTGCTTTTCTGGT  75 176
        rbtD NONE
        araB  543472 ..  543484 +  -4.8  -3.56643   GCCATGGTGGCCTTG                CCGA AGGGG TCGG                TTTGAACAGTCTGAC  55 8
   Dshi_0556 NONE
       greA2  544921 ..  544951 +  -8.8  -3.53091   ACAACCCGCAGCGAC       CCGGTGACGCCGCG CAT CGCGATTTCCCCGG       TTTGACCGGCGCCCT  63 19
        dadA  546697 ..  546715 +  -5.8  -3.71378   TCATGATGTTTCATA             CGGGCGCG TTC CGCTCCGG             TTTGCATGTCCGATG  60 409
   Dshi_0559 NONE
        fhuC NONE
        fhuD NONE
        fhuB  550231 ..  550241 +  -3.2  -4.12902   TTCTTGACAAAACCA                 GTCG GGT TGAC                 TTTTCCGACTGATTA  61 325
        irpA  551877 ..  551900 + -18.2  -4.19817   CCGCATCAAGCTCAC          GGCAGGCCTC TGCG GAGGCCTGCC           TTTTCCCTCCATACC 100 74
   Dshi_0564 NONE
   Dshi_0565 NONE
   Dshi_0566  555980 ..  556014 + -14.8    -4.208   CGCCCTTTGGGCTTT     CTGCGGCGGCGCGGCG GGT TGCGGCGCAGCCGCTG     TTTCTGCTTTTGGCG  95 444
        fhuA  561051 ..  561075 + -13.6  -2.72144   CGGGCGTTGCGGCGC          GTGGCCCCAC CCATT GTGGGGCTAC          ATTTGCGCGGCGTGC  72 50
       aldH2 NONE
         rDP NONE
        betT  570785 ..  570813 + -15.3  -2.58544   CACGCCTGATACAGA        TGGTGGTGCGCAG AGC TTGCGCGCCACCG        CTTGTGAAACTGCGC  77 32
   Dshi_0580 NONE
   Dshi_0581 NONE
   Dshi_0582  573981 ..  573992 +  -5.8  -4.89393   AGGTTTTGCGCAAGG                CCTG TTTG CAGG                 TTTTTCTGCAGTTTG  82 377
   Dshi_0588 NONE
   Dshi_0589  580287 ..  580298 +  -7.2  -3.53012   AACTGAAATAGCCGC                CGCG CTGA CGCG                 TTTGGCGCGCGGCCG  60 30
   Dshi_0598 NONE
   Dshi_0599  592056 ..  592074 +  -2.2  -3.59262   GGCTGGACCAGAACG             CCGTTGCG CCA CTCGCCGG             TTTCCACCTGTCCGC  48 118
        nadE  595705 ..  595715 +  -5.4  -2.61264   GGCTGCATCGGCTGA                 TCGA AAC TCGA                 CTTCTCGGTGAGCGG  44 387
   Dshi_0609  603571 ..  603589 +  -5.2  -3.55622   GTGCCCAGGGGAACT             GCGCGC TGATATC GTGCGC             TTTGGCGACCTTCGC  55 209
   Dshi_0613 NONE
   Dshi_0614  607637 ..  607661 + -12.7  -2.52464   CCCGCGGGGCGCACC          CCGGGCGTCAC GAT GAGCCGCCCGG          TCGCTTCGGGCAGGG  63 210
   Dshi_0616  608738 ..  608753 +  -8.2  -3.05268   GAGCGCAAACGCCGG              GCCGCG CGGC CGTGGC               TCTTCGCGCTCATTC  57 66
        clpB  611701 ..  611722 + -15.1  -3.66654   GGCCAGCCCACCGAA           GGGCCCCGT GCGC GCGGGGCCC            TTTCGCGTTGCAATC  86 41
   Dshi_0618  612343 ..  612362 + -16.4  -4.90266   TTGCCGCGCATGCCG            GGGCGCGC TTCG GCGCGCCC             TTTTTCGTTGCTCCC 100 48
   Dshi_0619  613214 ..  613234 +  -3.1  -3.76492   CAGCCCCGAGATCGA            GGCGATGTT CAC GACCGCGCC            TTTCGTGGCCTTCAG  56 376
        yedY NONE
        yedZ  617174 ..  617193 +  -9.3  -2.62515   TGCAAACAGAGACTA            TCCCGGT TTAGCC ACCGGGA             TGATGTGCAGAGGTT  56 503
   Dshi_0625  623929 ..  623942 +  -5.2  -4.68424   GCCCTGAAAAGGCTT               GCCC AACGCA GGGC                TTTTTCCGTGCCTTG  78 128
   Dshi_0626 NONE
   Dshi_0627 NONE
   Dshi_0628  626337 ..  626354 +  -4.7  -3.15544   CGGGCAGCAGCTCTT             CTTCCCG AACG CGGGCGG              TTGATCCGGCTCACG  48 4
        glpR  629992 ..  630012 + -12.5  -3.50393   ATCCCCTCGATCACG            CGCGCCCGT ATG ACGGCCGCG            TTCTCTCCGATGCCG  74 163
   Dshi_0634  633829 ..  633846 +  -9.8  -2.87344   CGTGGCGTCGAGGAA             GGCGCG CGCGCC CGCGCC              TGTCTCGGCCGCCTC  59 448
   Dshi_0638 NONE
   Dshi_0639  639358 ..  639387 + -17.1  -3.05384   TTGCGCCCTGCGCGC       GCCGCGCCTTGCC GCTG GGCAGGTCGCGGC        TTACATCGCCCACCA  88 83
   Dshi_0640  640182 ..  640194 +  -4.7  -2.80113   GCGCGCGGTCTCTGG                GCACG CTA CGGGC                TGTGATCGCATGATG  44 8
   Dshi_0641 NONE
   Dshi_0642 NONE
   Dshi_0643  642122 ..  642164 +  -5.5  -3.23274   GAGTGGAATAAACTT CGC-CGCAAGCGGGTTTCCG CGGG CGAAAACCCGCTTGGAAGCC TTGACTTGTCCACCG  51 30
        uvrC NONE
   Dshi_0645  645421 ..  645455 + -17.9  -3.53811   CCCAGTAACGGCAAC    G-CCTGCGCCCCGAAC CCCG GTCCGGGGCGCAGGTC     TTTCAGGGAGGTGCC 100 33
   Dshi_0646  647636 ..  647663 +  -2.6  -2.78679   AAGTGTCGGGCAAAC        GTCGGGCATGTG TTAC CATCTGCCTAAC         ATTTGCCTAACGGGG  39 87
   Dshi_0647  650873 ..  650897 +  -4.1  -3.01712   CTCGCTGACCGCGCG          GTCGCGCAGCT TGG GGATGCGCAGC          TCTTCGGGGCCGACC  44 385
   Dshi_0651 NONE
   Dshi_0652  655229 ..  655255 +  -7.3  -2.78384   GGGGCGCGCTGCCCC        CCGACCTGCGGGC GCG GCCT-CAGG-CGG        TCTCGTCGCGCCGCG  52 52
        cycM  656764 ..  656781 + -14.1  -4.75372   CGGATCGCAATTCGG             GGCCGCC TTCG GGCGGCC              TTTTTCATGGGTGGT 100 51
        oppA  658870 ..  658884 +  -8.5  -3.29511   AAGGCCGAGGCCCTG               CGCGC GAAGG GCGCG               TTGTAAGCCCATGGG  60 5
      oppBC1 NONE
      oppBC2 NONE
       oppDF  662838 ..  662859 + -15.9  -2.62263   GCACGTCGCCCGGGG           CGAGAGGGG CCAG CCCCTCTCG            TGCTCTCCCCGGGAT  77 93
        fixK  665138 ..  665148 +  -5.4   -4.1822   GGGCGTGTCGCTCCG                 CTGA TTC TCAG                 TTTGTTCCCGTAGCG  65 52
        fixN NONE
        fixO NONE
        fixQ NONE
        fixP  669046 ..  669082 +  -5.5  -4.17048   CACCGGGGGTCAGAC    GGGCCCAGCGCGCACTG TGT CGCAGCGCGGAGAGCCC    TTGTTTTCCGGACCG  67 175
        fixG NONE
        fixH NONE
        fixI  673305 ..  673328 +  -2.3  -3.00774   ACGCATTGCGTGTAC          GCTGAGCCC ATGGAA GTTCTCAGC           TATCTCATTCCGATC  41 21
        fixS  673940 ..  673997 +    -6  -3.64318   GGATCTCGGCAAAGC CTGC-CTCCGGCTCGGGCGCATTGGCC ACCTC GGCCGATCCGTCCTCGGCGGCGAGCTG TTCTGTCGTTGTCTT  59 493
        rsmC NONE
   Dshi_0672  678358 ..  678368 +  -8.2  -2.92522   CACCGCCACGGCCCG                 CCCG CGC CGGG                 TCTCGTATTGCGTGG  54 135
        hemF NONE
        ggt2  681527 ..  681557 +   -16  -4.77036   CGCGCCACTGTCAAT       GCCCCGGGCGCCGC AAG GATGCGTCCGGGGC       TTTTTCATGCTACAA 100 48
   Dshi_0676  684178 ..  684194 +  -4.3  -2.79183   GGCAAAGAGCAGAAA              TCGCCGG AAA CTCGCGA              TCTGGTCGAAATCGC  43 461
   Dshi_0678 NONE
   Dshi_0679  686654 ..  686692 +  -6.8  -4.07568   TGACCGGGACCAAAA   TCCTTGAGCAAGGATTTT GGC AAAAGTCTTGCTCAAGAC   TTTTGCGCCCGGGGC  67 38
       ibpAB NONE
   Dshi_0684  689587 ..  689601 +  -5.6  -2.91264   CCGTGGAGAGCGCAT               CCGCCA CCG TCGCGG               TCTCTGCCTCCACCG  46 155
   Dshi_0687  693347 ..  693360 +  -3.7  -4.14243   AGTTTCCGTTGGTGC               CCCCG GACA CGAGG                TTTTGCGCTGGCCTG  63 40
   Dshi_0694 NONE
        leuC NONE
        leuD NONE
       dctP1 NONE
       dctQ3 NONE
       dctM1  706515 ..  706543 +  -2.4  -3.02144   CCCGCCTCTGGCCAC       CTGGCT-GCCG GGGCTGGG CGGCTAGACAG        TGTTGCGCGGGCTGC  41 1
   Dshi_0700  708137 ..  708162 +  -4.1  -4.42238   CCGCCGGGCGCAAAA         TCCTT-GCGGAA GGA TTTTGCCAAGGA         TTTTGCTTAAAATCC  69 46
   Dshi_0704 NONE
   Dshi_0705  713680 ..  713708 +  -3.8  -3.28712   ACGAGTTGGCCAGGG       TGCCGG-TGGAGT TGGG GCTCGATCCGGCG        TTCTACCAGCAGGAC  48 449
   Dshi_0707 NONE
   Dshi_0708  716616 ..  716626 +  -8.2  -3.32268   GTCCACCGCGGGGCC                 GGGC CGC GCCC                 TTCTCAGGCTCCTTG  60 395
       atoDA  718680 ..  718695 +  -2.5   -3.5774   ACCTGCGGCGCGGGG              TGCCT GCGGCG GGGCA               TTTGCGGACTTGAGT  49 41
   Dshi_0710  719522 ..  719542 +  -3.1  -3.14132   CCGGCGGCGAGGTGG            TCGCGCACC AGC GGTTCGGGG            TTCATCCCCCAGCCG  44 170
        lysE  720947 ..  720981 +  -3.4  -3.86524   CAGCAAAGCTGCTGA     TCCGGGGCGTGC CGGGATAAAGC GCGCGCCACGGC     TTTGTCGCAAGCTGT  56 6
   Dshi_0713 NONE
   Dshi_0714 NONE
   Dshi_0715  723619 ..  723633 +  -4.9  -3.23216   GCGAATTGCAGCCGG               GTGGC CGAGT GCCGC               TTGGTGATCGTGCCC  49 433
        pccB  727854 ..  727869 +  -2.4  -3.18264   CGGGAGGAGCGAGGG              GATCGC AGAT GCGGCC               TTCGTCGGTGGGGGA  43 91
   Dshi_0719 NONE
   Dshi_0720 NONE
   Dshi_0721 NONE
   Dshi_0722  729485 ..  729514 +  -3.5  -4.25104   CCCCAACGTCAAGAG       TGTGTTCTCCTCA AGGT TGTGGCGAACGTA        TTTTGGTCGCCCCAA  64 100
        pccA  731828 ..  731878 +  -6.7  -3.29511   GATCCGCACCGCCTG CCATACCAGC-GCCAGG-ACGCCTG ATG CAGGCGCGCCTGGCGGCTGCGCGGG TTATCCCGCGGTGGC  55 39
   Dshi_0725 NONE
        bhbA  735764 ..  735782 +  -4.5  -3.98083   CGCGCCCGCACCACG             TCGCGGA TCACC TGCGCGA             TTTGTAAATTCGCTC  61 247
        mnhA NONE
        mnhB NONE
        mnhC NONE
        mnhD NONE
        mnhE NONE
        mnhF NONE
        mnhG NONE
   Dshi_0735  743280 ..  743330 +  -5.1  -2.78816   CCGCGAGGCGAGATC CTGCTGTGATCCGCCCGGCGACG CAGGA CGACGCGGCGCAGATCGCGGCCC TCTGGTCCGCCCTGA  44 17
   Dshi_0736 NONE
   Dshi_0737 NONE
   Dshi_0738  745322 ..  745361 +  -3.5  -4.56597   GCCAGCTGATGTCAT G-CAGCAGGCAGGCCGC CTTGATCA GCCGCC-GCCCGCTGGC  TTTTTCCGACGAAAA  70 452
        mcsS  752053 ..  752078 +  -5.3  -3.01712   GAACCTGCTGCGCGG         CTGACCGG-CCC GCC GGGTCCGGGCAC         TCTTGCCAAGCCCGC  47 22
        proS  753470 ..  753506 +  -4.4  -4.10429   GCGCGCTACGCAGGG   GCCTGAGCCAAGGCTCT TGCA AGAGCCTTGCCA-AGGA    TTTTCGAAAATCCTT  61 20
   Dshi_0745 NONE
        aqpZ  755085 ..  755119 + -10.6  -2.52464   CCGTGGGCAGGCTAA    AC-CGGGCGGGCACC CAGACA GGAGCCCGCCCGTGG     TCCGTTCCCCGCCGC  59 87
        lolC NONE
        lolD  757577 ..  757603 + -15.1  -3.37879   GAGGCCGCCGCGCGA         TCGCCGACCCG CCCCC CGGGGCGGCGA         TTGGTTGGGGTTGGT  84 524
   Dshi_0750  761815 ..  761838 + -14.6  -4.88711   TTTGAAAAATATAGA          GCCGCTCACA GGGA TGTGGGCGGC           TTTTTCATGTCTTGT 100 51
        ppk2 NONE
   Dshi_0752 NONE
        nicO NONE
   Dshi_0754  765199 ..  765211 +  -4.7  -2.62184   CTGAGCGGCCTTGCC                CGGGG GGG CGCCG                TGATCTAAGGCCGGA  43 37
   Dshi_0755  766699 ..  766725 +  -6.4  -2.78463   CAGCCAGTGATAGAC         CCCGAGGGCG AGCGCGC CGCCCGCGAG         TGTCATGGCCAGCGT  47 125
   Dshi_0759  769799 ..  769820 + -15.9  -3.60296   CGGGACCATGAAAAA           GGCCGATGC GCTT GCATCGGCC            TTTGACATGCAGGTG  86 72
   Dshi_0763 NONE
   Dshi_0764 NONE
   Dshi_0765  774034 ..  774075 +  -6.6  -3.23216   ATATGGGCATTGCGC CGGGT-GG-CGTCGGTGCCGG ACC CCG-CGCCGATGACCAAACCG TTGATGGTGATCCCG  53 281
        thyX  776443 ..  776459 +  -6.5  -4.42667   TTCTCGGTAGTCCTC              AGATGCC GAA GGCATCG              TTTTGCTGGTTTTCG  76 351
   Dshi_0770  777049 ..  777070 +  -2.2  -3.24232   ATCAGCGACGAGGGG           TCGCCGTCG AAAAA CG-CGCCGA           TATCTTTCGGCCCGA  44 128
        ttuC  781171 ..  781197 +  -2.8  -3.22475   CTGGCGCGTTCCCGC         CTGGGCGCGG CTCTGCC CCGCGGTCCG         TCTTGTCCGGGTGAG  44 81
   Dshi_0776  782343 ..  782356 +  -2.3  -3.56558   GCACCTTGCCGACGC               TGTGC TCGC GCACC                TTGTAGTTGATCTTC  48 189
   Dshi_0779  785734 ..  785753 + -11.4  -3.35015   AGAACGCGATCATCC            GCGCGATC AGCG GGTCGCGC             TTGTCGGGTGATTCC  68 237
   Dshi_0782 NONE
   Dshi_0783  790586 ..  790641 +  -6.2  -3.61398   AAGTCCTGACCGCGA CCG-GCGATCCGCAGCC-C--G-CGCGCC AGC GGCTCGACAAGTGGCTGTGGTTCGCGCGG TTCTTCAAGACCCGC  57 32
   Dshi_0784 NONE
        fdxA  791533 ..  791556 +  -3.7  -5.75342   AGAGCCCACCGAAAA          CGCTTCAGC CTGTGT GCCGATGCG           TTTTTTTTACCGCGA 100 212
   Dshi_0786  792193 ..  792210 + -12.7  -5.23316   TTCACGATGTTCAAA             GCACGGC TTCG GCCGTGC              TTTTTTCATGTGCTC 100 52
        cobT  794122 ..  794149 +  -2.7  -3.95584   CGGGGGTGTCCGACG        GCTG-AGGCTCA GGCGG TGGGCTTGCGGC        TTTGCTTCATCGCGG  54 21
   Dshi_0791  799540 ..  799597 + -13.2  -3.28712   AGGCCGCGCCGGGAG TGTC-CGGTCGGGCAGGGGCGCCGCCC ATCGG GGGCGGCGCGCCGGTCAGCCCACGACG TTGTAGCCGCGCCCG  74 39
        hisB NONE
        hisH  803150 ..  803187 +  -6.7  -3.29144   CGGGCTTGGCCTTCT   CCATCAGCGCCCGGTCC ACCT GGTAGGGGCGCAGCTGG    TTGTGCCGCCGCTCC  54 380
   Dshi_0804 NONE
   Dshi_0805 NONE
        tauZ NONE
        lepA  819447 ..  819474 +  -3.4  -4.07568   CCACCGCCCTCAAAA        TGGACGGCTGATC GCA GATCAGGCC-CCA        TTTTCGAGGGCGCGC  58 132
   Dshi_0810 NONE
   Dshi_0811  821153 ..  821178 +  -3.1  -2.87132   AGGTGCCGAAACTCG         CGGCGGAGTAGG CCG CC-GCGCCACCG         TCTCTCACCCCCACC  42 15
   Dshi_0812 NONE
   Dshi_0813  822056 ..  822066 +  -3.2  -3.25758   TACGAAGGGGTCTCC                 GATG ATC CGTC                 TTGCATTCATTCTCT  46 114
   Dshi_0814  822319 ..  822341 +  -9.8   -4.7373   CTCCTCCCGAATACG           CCGCGCCG CAGCAAC TGGCGCGG           TTTTTGCTGCGCTGC 100 102
   Dshi_0817 NONE
   Dshi_0818  823745 ..  823765 +    -6  -3.52073   GCCGGGGCGAAGCTT            GGGCCATG CGTAT CGCGGCCC            TTCTGATGTTCGGGA  55 45
   Dshi_0819 NONE
   Dshi_5001  825777 ..  825792 +  -7.5  -4.19704   GTTGCAGGTGATATG              GGCGC GCCCGA GCGCC               TTTTCCGTGGCGTTG  74 297
        ppnK  827756 ..  827770 +  -4.2  -3.25942   GGGTTGGAGGAGCGG               CTGATC CGC GAGCAG               TTCGTCTGACCCGCT  48 2
         cdd NONE
        deoA NONE
        deoB NONE
         add NONE
         upp  840232 ..  840253 +  -3.5  -2.83715   AGTTCCGACAGCAGC           GCGCCTGCG GCCA CGTCGGCGG            TCTCGTGATCCTCGA  43 381
   Dshi_0834  844008 ..  844059 +  -9.2  -3.59262   GAAACGGCAACAGGC CCCGCC-GGGGCGGAGCCTGTTGCG CGG CGCGACGGGTGCCGGGTCAGGCGGC TTTGCGGGTCTCCGC  68 39
   Dshi_0841  853305 ..  853325 +    -6  -2.87132   GATGGTGTTCCGGCA            GGCGGCGT GATCG GCGGCGCC            TCTGTCGGCGGCGGG  48 16
   Dshi_0843 NONE
   Dshi_0844 NONE
   Dshi_0845  856341 ..  856378 +  -9.7  -3.02144   GCACCGGCCCGCCGA   GCCGGGCGTGGACCGCGC GCA GCTCG-TCCTCGGTCGGC   TCTTCCGACAAGTAG  57 257
   Dshi_0849  859616 ..  859633 + -10.5   -5.1861   TGTATACAAGCAAAA             GGCGCCT TTCG GGGCGCC              TTTTTTCGTGGTCCG 100 48
   Dshi_0851  862812 ..  862827 +  -2.5  -4.07568   ACGCTTGGTTAACCT              G-CGCG ACAGG CGCGAC              TTTTGGACCACCCGG  57 130
        msbA  864964 ..  864979 +  -3.2   -4.2573   CGTAACGTCCCTGCG              CTTGCG CCAT TGCAGG               TTTTGCCGTTCTTTG  64 136
       fadD2  867033 ..  867047 +  -4.2   -2.8547   CCCTCTTGGGAGAGA               TCTCCC GGA GGAAGA               TATGATCTACGCGAT  44 94
   Dshi_0854  867398 ..  867426 +  -5.4  -3.90318   GGCCATAGGCCACCA       CGATATGATCCGT CTGC ACGG-TGATATCG        TTTGTCGGGTCGTAC  63 171
   Dshi_0864 NONE
   Dshi_0865  882003 ..  882019 +    -3  -2.60512   GCCGCTTGCAAGCGG             CTT-GCC CCGC GGCGAAG              TGGATTGATCTTCGG  39 106
   Dshi_0866 NONE
   Dshi_0867  884123 ..  884135 +  -3.3  -3.40403   GTTCATCGCCCCCAC                CGAGA TGA TCCCG                TTATGGTCCGAGGCG  48 524
   Dshi_0872  889995 ..  890016 + -15.1  -3.71917   TCTGTTCGGGGAAAA           GGGCGGTGC TCCG GCGCCGCCC            TTTGCAGTTTCCGAT  90 50
   Dshi_0873  890846 ..  890884 +  -8.8  -3.16564   GAGCCAGCCGCTTTG  CCGGTG-ACCCTGCCGC ATTTCG GCGGCATGCTGCGCCGG   TTGCTGCACTCACGA  58 59
   Dshi_0874 NONE
   Dshi_0875 NONE
   Dshi_0876 NONE
   Dshi_0877  893909 ..  893930 +  -6.6   -2.5955   CGTTAAGAACCGGAT           TCGGGCGCA ATGAG TGCGCC-GA           TACATTATGCCGGAT  48 249
   Dshi_0881 NONE
   Dshi_0882  898914 ..  898928 +  -7.8  -3.53012   TTGCGTCCCGCGCGA               TGCTGC GGC GCGGCA               TTTGCCGCAGGGCGC  60 324
   Dshi_0884 NONE
   Dshi_0885  901489 ..  901499 +  -8.2  -3.39327   CCGGCCGGTGGAAGG                 CCCG GAT CGGG                 TTGTGGGTCTCCACC  60 436
       sgaA2 NONE
   Dshi_0888 NONE
   Dshi_0889  905489 ..  905508 + -12.1  -3.02371   ATCCAAAGACCGGCA            GGGGGGC GCGACA GCCCCCC             TCATTGTTTCGAAAA  68 40
   Dshi_0890  906600 ..  906622 + -11.9  -3.83026   ATGTGACCATGCCCG           AGGCCCGCC GGTAA GGCGGGCCA           TTTGCTATGGGAGGG  81 52
   Dshi_0892  909026 ..  909051 +  -3.1  -2.82623   GCGTGAACCCGCCGG         GGATAGGGGGA ACTC TCCCTCAGGCC          TAATTGTGCAACAAC  40 35
   Dshi_0893  910479 ..  910492 +  -3.8  -3.39595   TCGTCGCTCCGCGTG               TCCC AATGCC GGGA                TTATGCGTGATTGCG  51 129
   Dshi_0894  912041 ..  912092 +  -5.2  -3.72576   GTACGCAAAGCGCCC CCGCCCGACGCCAGC-ACGC-GCGAC AACG GTTGCAGCGCAGC-GGTGT-GGGTGG TTTGATCGAACACGG  58 101
   Dshi_0895 NONE
   Dshi_0896 NONE
   Dshi_0897 NONE
   Dshi_0898 NONE
   Dshi_0899 NONE
   Dshi_0900 NONE
   Dshi_0901 NONE
   Dshi_0902 NONE
   Dshi_0903  927960 ..  927973 +  -9.5  -3.29144   TATAGGGCCGCTTGC               GCCCG CCAC CGGGC                TTATCGGCGGCCTCC  61 157
   Dshi_5007 NONE
   Dshi_0905 NONE
   Dshi_0916 NONE
   Dshi_0917  942712 ..  942744 +  -6.2  -3.85698   CAGTGAGACCAGGCA      GACGAAGGCCACCT CGCGC AGGTTGCCTTCGGG      TTTATAGCGAAAGAG  62 516
   Dshi_0925  949630 ..  949656 +    -8    -3.322   CTGAGACCCGACTCT         CCTCCGGATTTT CGG AGAGTCCGCAGG         TTGATCTCTGAGGCT  58 37
   Dshi_0934  960222 ..  960240 +  -8.8  -3.16668   GTAATCGACGAACTC             AGCGATCC GGA GGATCGCA             TTGCTGGCAGTGTTG  58 97
   Dshi_0938  965769 ..  965798 +  -7.8  -3.21395   GAGAGCAAGGCTTGT       CGCTCCAGCGCT TCCAAC GGTGCTAGAGCG        TCTTGTGCGGACCAT  56 294
   Dshi_0940  966440 ..  966453 +  -2.4  -3.68024   CTGTAAGCTGTCTGC               GATG GATAGG CATC                TTGTGTCTTCGCCCC  52 164
   Dshi_0941  967468 ..  967499 +  -2.8  -3.60296   GCCATCAGCTTTCCG      GAGCCGGACCCTTG ATCG CCGTGGTTCTGCTC       TTTCAGGTCGCGATC  51 11
   Dshi_0942  968804 ..  968816 +  -3.3  -3.40403   GCCGATCAGGAAGGG                CAGGA AGC TCCAG                TTCTCATAGACCACC  48 385
       lldD2  973766 ..  973785 +  -9.2  -2.52464   CCGAGGATTTCGCCA            CCCGCTGG AAGG CCAGCGCG             TGAATTGACACGCGC  56 3
   Dshi_0949  974481 ..  974493 +  -3.3  -2.87132   TTGGACCTTTCCAAT                CGGGT CCG GCTCG                TCTATAGCGCGCAGG  42 49
        rplY  975228 ..  975245 + -12.7  -4.93365   CCTGGAACGACGAAA             GGCAGCC CTTG GGCTGCC              TTTTTCGTTGTGGGA 100 51
        engD  979972 ..  979999 +  -4.7  -3.21925   TTATGCGGGCTCAGG        TCTCGGCGGGC GCGGCG GCTCGGCGGGG         TTCGTGGTCGCCTCT  48 67
   Dshi_0960  985491 ..  985513 +  -5.4  -3.63991   GAGAGATCGAACCCC           TCGGCGGGGA AGG TGCCCGCGGG           TTGTTCCACGTCCTG  55 98
   Dshi_0968  990499 ..  990513 +    -7  -3.86897   GATATAGCGGCGCAG               GGCCGC CTC GCAGCC               TTTGTCCCAGATCAG  64 39
   Dshi_0976  998238 ..  998261 +  -4.6  -4.08064   GGAGATCACGCCATG          CGTCAG-CTAG TGC TTAGACTGGCG          TTTTCGAGGCCGCTT  63 95
        murA NONE
   Dshi_0978 1000458 .. 1000479 +  -4.3  -3.17901   CGCACCCTCGCGCAA           GGCCCCATC CCAC GATTGAGCC            TTGCCTTGAGGCTCT  47 7
        hisD NONE
   Dshi_0980 1002306 .. 1002316 +  -3.2  -3.57561   CTGTTCACCCTGATC                 TGCG TGC TGCA                 TTTCGGGGCTTGAGG  51 2
   Dshi_0981 NONE
        infA 1003156 .. 1003176 +  -8.1  -3.99405   CTACCGCTTCAAGTA            ACGGTGCCC CCC GGGCCCCGC            TTTATCCTCGGTTCC  73 25
   Dshi_0983 NONE
   Dshi_0984 1005198 .. 1005232 +  -3.4  -5.57396   TTACGGGGCGAAATC     GTCCCACCGTTTTCGC TGC GGGGCAAAAGTGGGAC     TTTTTTGTTCGTTGT  93 440
   Dshi_0993 1023105 .. 1023134 +  -3.5  -3.53224   GACCATCAGAAAACC      GCGG-CG-GGCTG ACCGGC CCGCCGCGACCGC       TTTGGGAGGAGCGTC  49 47
   Dshi_0994 1025277 .. 1025292 +    -6  -2.79183   TCCTCCCGCGCGAGC              AGGCGC AGGA GCGCCA               TGTCGTCCACCTCCG  47 233
   Dshi_0996 NONE
   Dshi_0997 1030464 .. 1030478 +  -2.7  -3.31144   CGCACCAGGTCGCGG               GCGAC ATCCG GGCGC               TTGTCGCCGTCGACG  46 507
   Dshi_1005 NONE
   Dshi_1011 1045504 .. 1045519 + -11.8   -4.7254   GCAAGACACCGAAAC              GGCGCC CGCG GGCGCC               TTTTTCATGCGCGAT 100 63
       hemB2 1053385 .. 1053409 + -11.3  -2.52543   GCGCCTGCGCCGGTG          TTCGCCCCGGG CGG TCCGGGGCGCG          TGAGTTGGAGGAGAT  62 42
   Dshi_1018 1053848 .. 1053864 +  -6.5  -3.85698   TTGCCCACCATCTGG              CCCGG CAAGCGA CCGGG              TTTCTCGAAAAGCAC  62 173
   Dshi_1020 1056068 .. 1056110 +  -4.7  -3.90316   TTCTGAGAAGGCAGG C-CGGGGAGGGGGCGCTGC CCCCGTC GCTGCGCGCCC-CCCGGAG TATTTTTACACAAAT  60 35
        trmB 1057295 .. 1057306 +  -7.2  -2.57944   GAAAATCGCCATGGA                CCCG CTGG CGGG                 CTTGGTCTACTCCTC  51 79
        aroA NONE
         cmk 1059391 .. 1059416 +  -3.2   -3.1585   AATGGCCCATAAGCT         GCAATTCGCC CAACTC GGCGAATGCC          TCTTGCGTTGGGTCA  44 54
   Dshi_1024 1059903 .. 1059929 + -12.3  -2.70704   CGCAAGGCAAGACTG        CAGGGTC-CGGC AAAA GCCGCGGCCCTG         ATTGCTTTGGGAGAT  66 127
        rpsA 1061725 .. 1061744 + -12.1   -4.7254   CACGAACACGGAAAA            GCCCCGC CATCGC GCGGGGC             TTTTTCATGGCGGGT 100 50
        ihfB NONE
   Dshi_1028 NONE
        trpF 1064065 .. 1064076 +  -2.2  -3.14564   TCGGGCACCCTGCGG                GCAT GGCT GTGC                 TTCCTCCCCAGATGA  43 58
   Dshi_1030 1064381 .. 1064402 + -11.7  -3.55444   TGGAAATCGCGTCTC           CAAGGCTTT TCGA AAAGCCTTG            TTTACCCCCTGCGGC  75 109
        trpB 1065781 .. 1065801 +  -3.1  -3.53012   CGTCTATACCTTCGG            TTTACGGCG GTC CGCCGGGGG            TTTAGGGGGGCGGCA  49 115
   Dshi_1032 NONE
   Dshi_1033 1066891 .. 1066945 +  -4.8  -2.89039   GGGGACGATGGCGAC GACGGGGACGACG-GCGATGACTGAG ATCAC CGCCGTCCGCGCGCGCCG-CTCCGTC TCTCTGACGGTGGTT  46 2
   Dshi_1034 1067588 .. 1067611 +  -8.8  -3.96624   CGCGTCCCGCGCGCG          GCTGCCGCGTC CAC GACCCGGC-GC          TTTGTGATGCGCGTC  73 164
   Dshi_1035 NONE
   Dshi_1036 NONE
   Dshi_1037 1070776 .. 1070821 +  -9.6  -3.14051   CCGCGCCCGCGCACC CGGTCCGCGATCCCGGCCTGCC GCAT GGCGGCCCAGG--CGCTGACCG TGTTGATGGCGATGG  59 59
   Dshi_1044 NONE
   Dshi_1045 1079881 .. 1079937 +  -6.4  -3.85698   GGCGCTGGCGCGCGC GGCGGGGCGGCTGT-GACCGAC-GCGGC GCG GCTGCGGGCGCTGGACGACCGCTTCGCC TTTCTCGAAGACCCC  65 10
   Dshi_1046 1081500 .. 1081520 +  -2.3  -2.60496   GGTCACGGTCACGAA            GCCCAGCCG CCC CGACCGGCC            CTGTTTCAGCCGCAC  38 502
   Dshi_1052 NONE
   Dshi_1053 NONE
   Dshi_1054 NONE
   Dshi_1055 NONE
   Dshi_1056 NONE
   Dshi_1057 NONE
   Dshi_1058 1093333 .. 1093352 +  -3.4  -3.65812   TGTCGCGGTAATCCT            CCAGGTCG AACG CCACCCGG             TTCTCTTCCACCCGC  53 344
   Dshi_1065 NONE
   Dshi_1066 1099093 .. 1099122 +  -9.2  -3.64487   CCCGCGCGGGGGTGG       GGGGCCTTGACC TTGCCC GGTCGCGGCCTC        TTATTGCCCCTGTAA  68 232
         sod 1099788 .. 1099809 + -15.1  -4.33928   GGGATCATGCCACAA           CGCCCCGGT CTTG GCCGGGGCG            TTTGTATTTGAAATA 100 49
   Dshi_1069 1101295 .. 1101319 +  -9.2  -2.73364   GAAGGCGGTGAACTC          CGTCTCCGCC CGGGC GGCGAAGGCG          TCGTTGCCCTCAAAG  55 471
        purC NONE
        purS NONE
   Dshi_1078 NONE
        purQ 1107726 .. 1107775 + -17.2  -3.28712   CTGCTGGACGCGCTG GCGCCGGCTTGAGCATCGGCG-GCG CGC CGCCCGCCGATGC-CT-GCCTGCGC TTGTGAGCGCAGGGC  91 14
   Dshi_1080 NONE
   Dshi_1081 1110988 .. 1111016 +   -11   -3.7108   TGGGATCGGCGCCAC       CGGG-GCGGGGTA GAGA TACCGCGCGCCCG        TTTGGGTGTCAGCCT  76 92
   Dshi_1086 1114085 .. 1114105 +  -2.3  -3.68222   AGGGCAGGGATCAAG            GCACGGAGC AGG GCGCCGGGA            TTCTTCGGCTTGCGC  52 62
   Dshi_1087 NONE
   Dshi_1088 NONE
   Dshi_1089 1118047 .. 1118063 +  -3.6  -3.89302   CGGGCGGTCCTGCGC              GGCCGT CCGGA AAGGCC              TTTCATGTCCTTGAT  56 66
   Dshi_1090 NONE
   Dshi_1091 NONE
   Dshi_1092 1120728 .. 1120760 +  -6.2  -2.62613   GCCCGACTAGCGCGG     CTGCCCGGAT-GCGG TTCG TTGCTGTCCGGGCCG      GTATTTGGGATGCAG  46 31
   Dshi_1093 1121294 .. 1121317 +    -3  -3.04144   ATGCGGATCTGGAAA          CCGCG-GACAG CAC CTGACCCGCGA          TCTTGGACATGCGGG  43 9
   Dshi_1094 1122433 .. 1122450 +  -6.3  -3.65046   CAGCCGATTTCACAA             CGCTCTAC ACT GTAG-GCG             TTATTCGGGTCGCAC  59 78
   Dshi_1095 1124036 .. 1124059 + -17.4   -5.1675   AGCACATGTTGCACA          CGCGGGGCCT TGGC GGGCCCCGCG           TTTTTTGCTGCCTAG 100 47
   Dshi_1098 NONE
       msrA2 NONE
        prmA 1128999 .. 1129013 +    -7   -3.6947   ATAATCTGTCGTCGC               CGCGAG GGC CGCGCG               TTATCTTCAAATTGT  62 37
   Dshi_1101 1129407 .. 1129428 + -14.4  -5.45802   GCGCCTAACGCAAAA           GGCGCGCC AGTGCG GGCGCGCC            TTTTTGTTTTCGGAG 100 57
        ruvC NONE
        ruvA NONE
        ruvB 1132265 .. 1132276 +  -5.8  -3.52113   CGAAAGACTTTATGC                CTCC GGGG GGAG                 TATTTCTGCAAAGGT  55 50
   Dshi_1106 1132906 .. 1132954 +  -3.7  -3.07013   TGTCTTGCGGGTCGC GGCGCGGATCGGGGCGACGCA ATGAGCG TCCATCGCTTCGATCTGCGGG TCTATTACGAGGATA  45 1
   Dshi_1107 1133364 .. 1133375 +  -2.2  -3.17622   AGCCTTTCAAAAACC                CG-GC AAA GCGCG                TATCTTGTCGGCATA  43 52
        tolQ NONE
        tolR NONE
        tolA NONE
        tolB NONE
         pal NONE
   Dshi_1113 NONE
        tilS 1139723 .. 1139744 +  -4.3  -2.71144   TAAGACAACCGTACC           GGCGCGC-CG ACC TGAGCGCGCG           TCCTTGAGGAGAATC  42 66
        ftsH 1141721 .. 1141742 + -11.5  -5.16237   ACAAAAACCATCAGA           GGCGCTCCT ATCT GGGGGCGCC            TTTTTTGCTGAGCTT 100 66
   Dshi_1116 1142413 .. 1142435 +  -2.7  -3.28712   TGTGGTTTTGGGCGC          TCGGTCCGTC GGAA GATG-ACCGG           TTGTGGCCCAACGGG  45 7
   Dshi_1133 1159763 .. 1159783 + -10.4  -2.60244   CCAGGTCCACGACAC            CCTTGCCG GTCAG CGGCAGGG            TGCATTCCTTGAGAA  57 247
        ctaC 1168977 .. 1169002 + -13.9  -4.25104   CAAGTGACATGACCC         GCGTCGGCCCG CATG CGGGCCGGCCC          TTTTCGTGAAAGCCA 100 34
        ctaB NONE
   Dshi_1142 NONE
        ctaG NONE
        ctaE 1171624 .. 1171645 + -14.4  -3.59262   TCTGAACGCGCCATG           CGGCCGGG CCCTGT CCCGGCCG            TTTGCACGTCTGCCG  85 49
   Dshi_1145 NONE
        thrC NONE
   Dshi_1147 NONE
   Dshi_1148 1175764 .. 1175784 + -16.9  -3.10796   TGCGGGCAACAAAAA            CGCCGCTTG ATC CAAGCGGCG            TCTTCGGTCGTGCCG  88 124
   Dshi_1156 1182696 .. 1182709 +  -5.3  -4.18018   AAACCCTTAGCAAAA               TCCTT GCTC AAGGA                TTTTGCGTCGCGCGG  65 76
   Dshi_1159 1186554 .. 1186571 +  -8.3  -3.87815   GCCTTTTTCTGCCTT             GGCCGCG CGCT CGCGGGC              TTTCTGCGCCTCCCA  68 435
   Dshi_1161 1188341 .. 1188372 +  -3.6  -3.53012   TTGCGCGCGGCGCGC      TTGAG-CGCGAGGTC GCG GGCCGCGCGGCTGGA      TTTGCCCAGCGACAG  51 153
   Dshi_1164 NONE
   Dshi_1165 1195153 .. 1195184 +  -3.7  -3.17075   GGGAACTTCTCGCCT     TTCGCTGAGC-GCCC GGCA GGGTTGCGC-GCGAA      TTCCGTTGCCGAGAC  47 18
        engA 1197194 .. 1197218 +  -4.9  -4.35483   GCAGCGCCTCGACCT         CCCG-CGCGG CGCGGT CCGGGTCGGG          TTTCTTGTGATAGGC  69 489
   Dshi_1168 NONE
        amiC NONE
   Dshi_1171 1203910 .. 1203920 +  -2.4  -3.72576   TGTCGGGACGGTGAC                 GGCC GGC GGGC                 TTTACTGACCAAACC  52 7
        prfB NONE
   Dshi_1173 1206439 .. 1206454 +  -8.2  -3.96148   CGCACTTGTTCTCCG              GCCCCG GTCA TGGGGC               TTTGTCCTGCCCGCG  71 43
   Dshi_1174 1207345 .. 1207370 + -13.9  -2.64616   AGGTCCGCACGAAAA         ACGCGCCCCGG TTGC CTGGGGCGCGG          TCCTGTCCATGCAAA  71 56
   Dshi_1179 NONE
        queA 1215567 .. 1215597 +  -6.7  -3.13403   TCATCGCTGAGCGCG      GCGCGCGCCGCTGC GAAG GCCG-GGTGCGCGG       TATTCATGACCGAGG  52 296
       hemA2 1218215 .. 1218233 +  -8.1  -3.53091   GCCATCCGCGGATTT             TCGCCTG ATTTC CGGGCGA             TTTGCGCGAGAAACT  63 81
   Dshi_1183 1219598 .. 1219626 +  -4.3  -2.66272   GGCCGAATAGACGCA        GGCCCGTTGCCAC GAC GCGGCACCTCGCC        TAGATTTACATCAGG  41 31
        ispG 1220940 .. 1220960 +  -8.1  -3.55761   AAATTCCCCGGGCGC            GCGGTCCGG CAC CGGGTCCGC            TTTCAGAGGTAGATG  65 149
       pepA1 1230024 .. 1230046 +  -3.2   -3.5241   CGGGACGGCTACGAG           GGCTGAGGCC CGT GGGCGCGGTC           TATTTCTACCACATG  49 20
        holC 1230701 .. 1230718 +  -8.5  -3.38162   GGGTTTCCAGAGATT             TGTTTCG CGTG CGAAACA              TTCCATTTCTTGAAT  60 236
       suhB1 NONE
   Dshi_1201 1242560 .. 1242574 +    -7  -3.26471   AACTTCTCTTCATCG               CTGCGG TCG CCGCCG               TTCATATCCGGATGA  54 254
   Dshi_1203 1243508 .. 1243525 + -10.5  -3.25823   GGCGCGGTCGCGTCG             GGGTCCG GACG CGGGCCC              TTGATCTCGCGCAGG  63 87
   Dshi_1205 1244799 .. 1244816 + -10.5  -5.50499   CCAAGACTTCAAGGA             GCGGTCC GAAA GGGCCGC              TTTTTTTCCGTCTGG 100 61
   Dshi_1208 1247639 .. 1247657 +  -2.2  -2.67803   TGCGATCGGGATGGA             CGCCCGGC GGG GCTTGGCC             TACCTTTGATCGGCA  38 59
        coxC 1248845 .. 1248877 +    -9  -3.44321   AACCCGGGCCCGGAT      CGCGCGCGGCTCGC CCATC GCAACTCGTGCGCG      TATTTCGCATTTCGT  65 67
        coxM NONE
        coxS NONE
       coxL2 1252803 .. 1252834 +   -18  -3.57792   GAATGGCGGGGTGAA      CCCCGCCCTACACC TTCG GGGGTAGGGTGGGG       TTTCACCCTCCATCC 100 41
        coxD 1253720 .. 1253751 +  -3.4  -3.53091   GTGGCCCAACGGCTC      GCGGGGAAGGCGGC GTGA GCCGTGCGACCCGC       TTTGCCGCCCGCGAT  49 8
        coxE NONE
        coxF 1255974 .. 1256020 + -11.6  -2.58663   TGGTCAAGGTCCTGC CACATCGACGTGCGGTG-CGCC CCCAC GGCGGCGCCGC-CATCGATGCG CTTCTCCACGTCGAT  61 275
   Dshi_1221 1263312 .. 1263329 + -11.3  -4.87273   CTGCGCGGCGGAAAA             CCTTCCC CGCG GGGAAGG              TTTTTGTCCCATGTT 100 140
   Dshi_1224 1267550 .. 1267576 +  -7.8  -4.09685   GCGCCACGGCGCGAC         CCTTGACCGCCG TCG CGGCAGGCTAGG         TTTTCGCCGGTGACC  70 0
   Dshi_1225 NONE
   Dshi_1226 1269335 .. 1269345 +  -2.4  -5.00884   AGGCGCAGTTTGCCG                 GGTC ATG GTCC                 TTTTTTCCGACCAAT  77 54
        glcB 1271666 .. 1271693 +  -6.8  -4.07568   GACCGCCCTTCGACC        CAGACGCAGGCC TTCG GGCCTGCGCCCA         TTTTGCGCGCGCCGC  67 43
   Dshi_1228 1272156 .. 1272180 + -17.1  -2.57683   TCGCTGACGCCTGAA          CGGGCTGTGCG GTG CGCGCGGCCCG          GTTGTGCGCGCCTGT  83 27
   Dshi_1229 1273366 .. 1273417 +  -4.9  -2.71712   GGCGCGGGCATGCAG GGCCGCGATATCCACCCCG-TCGA AGATG TCGAGCGCGGCGTCGAGCGCGGCC ATTTGCAGAACCGGC  43 352
   Dshi_1231 1275419 .. 1275457 +  -2.9  -2.89267   AGCACGCGGGGTGCA  GGGGCGCGGATGGCGGCA TCAA TTCCGGCGG-CGCGGCCC   TCTGGTATCCTTGGG  42 144
   Dshi_1232 1276107 .. 1276124 +  -4.8  -3.55444   TGCGGCCGCATAAAT             CCGTCT GTTAAG AGGCGG              TTTGAACACTGGGCC  55 140
        pntA NONE
        pntB 1279277 .. 1279295 + -13.1  -4.27316   CAGAGACCACCGAAA             GGCCCGC CCCGT GCGGGCC             TTTTGCGTTGCAGGG  95 51
       xylB1 1281078 .. 1281099 +  -7.9  -3.28712   CTCGCCGATCCGTGT           CGCGGTGGC GAGC GTCGTCGCG            TTCTCGGCGAAGGCC  56 295
   Dshi_1249 NONE
   Dshi_1250 1298890 .. 1298908 +  -4.5  -4.65895   GCAGGGAGGACGGCC            CGCC-GGC ATGC GCTGGGCG             TTTTTGCGTGCCGGG  72 407
   Dshi_1253 NONE
   Dshi_1254 NONE
   Dshi_1255 NONE
   Dshi_1256 1304066 .. 1304079 +  -3.7   -3.4252   GGCCCGAGGTGCAAT               GGGCG GCGA CGCGC                TTGTCCTGCCTGAAC  49 167
   Dshi_1258 1305039 .. 1305057 + -13.2  -2.64747   CTCCGGGTGGCTTGA             GCTTCCAG TGA CTGGAAGC             CTTATGGTAGGCTCA  67 59
   Dshi_1259 NONE
   Dshi_1260 1308003 .. 1308024 +  -6.5  -3.21099   ATCGACGGCGATTGA           CCGTCCCGGG CAC CCCTG-ACGG           TTGATCCTGCGCACG  53 26
        gltS 1309550 .. 1309589 +  -6.4  -3.72324   GCGGGCCTTGCCCCC  CGCGATCTGGCTG-TCGGT CTC ATCAAGCAGCACGATCGCG  TTCTTGATCAGCATC  59 275
   Dshi_1264 1314388 .. 1314409 +  -2.1   -4.2828   CGAGATGCGCAGGTT           GGTTTGCCG CCTG CAGCATGCC            TTTTGATCCGTGCAC  62 278
   Dshi_1270 NONE
   Dshi_1271 NONE
   Dshi_1272 1322991 .. 1323009 +    -8  -3.06796   AGCGGCCTCAGGGCA             CGGGGCGC AGC GTCCCCCG             TTCGATCACCTCGCA  54 64
   Dshi_1274 1325108 .. 1325137 + -21.5  -3.67297   TACCGCTAATCCATA       CAGGGGCGGCCCGG CAA CCG-GCCGCCCCTG       TTGTCTCTATCTGAT 100 32
   Dshi_1275 NONE
   Dshi_1276 1327072 .. 1327082 +  -6.8  -2.78384   GCTCGAAGGGTCTCT                 CGGT GGC ACCG                 TCTGATCCCAAGCCG  49 10
   Dshi_1277 NONE
   Dshi_1278 NONE
       iolB2 1329671 .. 1329718 + -16.3  -3.53012   CAGCGCGCGCTCCTG GGC-GGCGATTGCGCCTCCCGCG GCTT CGAGGCAGGCGCG-TCGCCCGCC TTTCGCGCCGACCGA  86 390
        fdhB NONE
        fdhA NONE
         fhs 1337161 .. 1337171 +  -4.6  -3.23393   CAATGACGCAGGCGA                 GGTC GAA GGCC                 TGTTCTAGGCTGGAA  48 7
   Dshi_1284 NONE
        folD 1338585 .. 1338599 +  -2.7  -4.87318   CGTGTACCGCTAAGC               CCCTC TTTTC GCGGG               TTTTTCCCTTTTCCA  74 156
   Dshi_1286 NONE
   Dshi_1288 1342487 .. 1342511 + -11.3  -3.07816   CGCCTCCTGAGGCGC          GCGGCGCTTGC GCC GGACGCGCCGC          TTGGGTACCTCGCGG  66 31
   Dshi_1289 1343748 .. 1343760 +  -6.9  -3.51329   CGACAGCGCCCAGTA                CTGGC CCA GCCGG                TTCTCGTTGCCGATA  58 504
   Dshi_1295 1349842 .. 1349877 +  -2.5  -2.87211   GACGGCTGGGCTCGA    TCGGTCCAAT-CCTTG GGCAA CAGGGCAGGGGGCCGA    TATGTCCGACGAGAT  40 39
   Dshi_1296 1351142 .. 1351156 + -12.8  -3.55444   GCCCGCCAGGGCGAC               GGGGGC AGC GCCCCC               TTTCGGGCGTGCGCC  77 77
         ivd NONE
   Dshi_1298 1353179 .. 1353206 +    -9  -2.80816   AGGTGCTTGGTTTCG        CCGGTGACGGCG CCGT CGCCGACATCGA         TGTCATGGGTGAACG  56 422
        mccB NONE
        mccA NONE
   Dshi_1302 NONE
        mvaB NONE
        mvaA 1359686 .. 1359704 + -10.2  -2.90496   TGAGACCTCTTGCGT             TGCGGCGG TTG CGGCCGCA             TCCTTTCACGCAGGC  61 91
   Dshi_1305 1360107 .. 1360128 +  -4.3  -3.69323   AAATTTGCGAAGAAC           TCGTTGTCG ATGC CGCCGACGG            TTTCGGTGATCGTGA  55 154
        nuoA NONE
        nuoB NONE
        nuoC NONE
   Dshi_1310 NONE
        nuoD NONE
   Dshi_1312 1365117 .. 1365138 +  -9.4  -3.86524   CGGTTTGGCCATCTG           GCTGCGCG CCGAGT TGCGCAGC            TTTATCGAGACGTAT  74 326
        nuoE 1366406 .. 1366422 +  -4.4  -3.72893   AGAATTTTCTTCCCG              CGTTAC AAAGG GTGACG              TTTACTGAAAGCGTC  56 1
   Dshi_1314 NONE
   Dshi_1315 NONE
        nuoF 1368707 .. 1368729 +  -6.8  -2.65264   TCACGGCGGCCCTGG           CAGCCGAGTG ATC CGCGCGGCCG           TCATATCGCTCCTCC  48 15
   Dshi_1317 NONE
   Dshi_1318 NONE
   Dshi_1319 NONE
        nuoG 1372127 .. 1372141 +  -3.4  -3.34455   CGGGGAATTCCCGGC               CCCGCG CCC TGCGGA               TTGCGTTTGTGATCA  46 51
        nuoH NONE
        nuoI NONE
   Dshi_1323 NONE
        nuoJ 1375048 .. 1375058 +  -2.4   -3.6968   CCGGAGGGACATGAT                 GGAC GGT GACC                 TTGTTGCAATTCTGG  52 116
   Dshi_1325 NONE
        nuoK NONE
        nuoL NONE
        nuoM NONE
        nuoN 1381057 .. 1381069 +  -2.6  -3.33162   GGCATGGCGCTGGCC                GCGG CGGAA TCGC                TTGTCCGCTGACCTG  45 2
   Dshi_1330 NONE
   Dshi_1331 NONE
   Dshi_1332 1384565 .. 1384618 +  -9.4  -3.15544   GCCACGGCGGTCTCC GCCTGGGCCGCCACGGGGGCCTGCGC GGGC GCGTTGGCCTTCGCGG-GCTCC-GGC TTGGTCCGCCTGCGG  59 304
   Dshi_1335 1389236 .. 1389255 +   -15  -5.41143   TGTGGAAACAGGAAA            GAGCCGCG GCAA CGCGGCTC             TTTTTTTGCGCGGTG 100 54
   Dshi_1337 1391580 .. 1391590 +  -2.4  -4.07568   CCCCGAGGCAGATCA                 GGTC ACC GCCC                 TTTTCCGCCCGCACC  58 212
   Dshi_1339 1393215 .. 1393239 +  -3.6  -2.89602   ATCAACGCCACGCTC         TGAGCGCGG GCTTCACG CCGC-CTCA          CTTTCCTGTGGACGG  42 23
   Dshi_1340 NONE
   Dshi_1341 1396051 .. 1396069 +  -4.4  -3.21276   TGGTGCTCGGACCCG             TCGCGCAG GCG CAGGGCGA             TCTTCTGGCGGGCCC  47 222
   Dshi_1343 NONE
        tatB NONE
        tatC NONE
   Dshi_1346 1399620 .. 1399644 +  -8.6  -3.14211   CGCGGTCATGGCCAG          CCCCGAAAAC ATCAG GTTTTCCGGG          TTGATCCCGGCCCGT  56 327
         ndk 1403163 .. 1403178 + -11.8  -4.26589   GAGGGATCGTCAGAA              GCCGCC CTGG GGCGGC               TTTTGCATGTCTGGT  91 53
   Dshi_1351 1403954 .. 1403972 +  -7.4   -3.0264   GCTAGGCGAAGGGCG             TCGGCC ATGGCCG GGCCGA             TGTTGCGCACGGTTT  53 302
   Dshi_1353 1405944 .. 1405956 +  -4.8  -2.62396   GATGAACGACGCGCT                GTCG CAGAT CGAC                TGATCTGGGCCGATG  43 10
   Dshi_1354 1407301 .. 1407339 + -11.1  -2.53581   CATGCAGGACGCCGT  GTGCGCGGCAGCGATGGAC GCA GTCCGTCGC-G-TGTGCAC  TCCGTTGCAGGTCTG  62 55
   Dshi_1355 NONE
   Dshi_1356 NONE
   Dshi_1357 NONE
   Dshi_1358 1411744 .. 1411769 +  -4.5  -3.28745   TCGATGGCGGACATA         CACTCGCGCTC AGCT GAGCGCCTGCG          TTAACTTGTTGCACC  48 9
   Dshi_1359 1412290 .. 1412305 +  -8.2  -3.17075   TCAGGGGTGTGAGAT              CCGGCG CAGC TGCCGG               TTCCGTTCCAGCACG  58 29
        dld1 1414851 .. 1414867 +  -2.9  -2.91772   AAGGACGCTGAAAAC              CTGTGGA ATG TGCACGG              ATTTGTGGCAGAATT  42 51
   Dshi_1362 NONE
       pyrD1 1417878 .. 1417932 +  -8.3  -3.63968   CTGCTTGGCTTCCGT GATCGGCGCGGCCTCGCCCGCCTGT CTGGC GTGGGAGGGCGGCGCGCCGCTGGTC TTTGCAACTTTCGCC  65 255
   Dshi_1366 NONE
        amaB 1421629 .. 1421674 +  -2.9  -2.78032   TGCGCTAGGGATCGG ACCGGGCAGGGGGCGTTGCCC CCAT GCGCGATGCGCGCCCCCCGGA GTATTTTGACACAGA  40 33
   Dshi_1368 NONE
   Dshi_1369 NONE
         dht 1424191 .. 1424204 +  -3.7  -2.78384   GGAGCGGACCGGCAT               CCCCG CGAG CGGAG                TGTAATCGGCGCCGA  42 7
   Dshi_1371 NONE
   Dshi_1372 1426136 .. 1426156 +  -5.3  -3.48276   ACCCTCAAGCGGATG            GGGCTGTCG CAA TGACGGCGC            TTCTGTCGCCGAAGG  53 11
   Dshi_1373 1427167 .. 1427207 +  -8.8  -3.42768   CGACGGATGCAAAAG  TCGCGCTCGGTGCGGTCA ATCCA TGCCCACCCCAGGCGCGA  TTATCGAATTTTCAT  63 134
   Dshi_1374 1428341 .. 1428367 + -26.6   -4.8048   ACGGTCCTGAGCTAG         CCCCGCGCGCCG GAT CGGCGCGCGGGG         TTTTTCGTGTCCGCC 100 45
   Dshi_1375 1429866 .. 1429882 +  -9.3  -2.70932   GTGATCTGAGCCGCG              GGCACCG AGG CGGCGCC              TGCTTCGGCAGAAGG  57 32
   Dshi_1385 1439398 .. 1439428 +  -3.1  -3.37493   CCCGTGATCGGCGAA      GCTGTCGCAGACCG ACAC CAGCCAGCG-CAGC       TTCATCTCTTGCGCA  48 431
   Dshi_1389 1444080 .. 1444094 +  -4.2  -3.02144   ATCGCCCGCCGACAG               GGCC TCTCGCT GGCC               TCTTGAACCCGCTCG  45 5
   Dshi_1390 NONE
   Dshi_1391 NONE
   Dshi_1392 1445765 .. 1445782 +  -2.5  -2.72991   CAATAGATCAGGGTC             CGCCGCG ATTG CCCGTCG              TAATTGGCCCTCTCC  38 192
   Dshi_1397 1450797 .. 1450808 +  -3.6  -3.61356   GGGGTGCAGCAGCCG                GCTG AAAA CGGC                 TTTGCGATCCGTCCT  51 74
   Dshi_1398 1451365 .. 1451382 + -14.1  -4.80882   GGGGGGAAAAGGAAA             GGGCCGG CAGA CCGGCCC              TTTTTCATGTCGGAT 100 58
   Dshi_1405 1460444 .. 1460463 +  -3.4  -2.85351   TGACACTCGGGGGAA            AGCGGGCA ATTC TGCGCGCC             TGTAGTGTCGCCAGG  42 77
   Dshi_1406 NONE
   Dshi_1407 NONE
   Dshi_1408 NONE
   Dshi_1409 1465283 .. 1465303 +  -7.5   -4.2349   GCGATGCGCATCACC            TCCGCCG ACAGCTC CGGCGGG            TTTTCCATGTCGGGC  74 333
   Dshi_1411 NONE
   Dshi_1412 1466163 .. 1466178 + -11.8  -3.29144   CATGTGTCACCGGCA              GGGGCG GCGG CGCCCC               TTGTCAGCCCACTCC  72 55
   Dshi_1413 NONE
   Dshi_1414 NONE
   Dshi_1415 NONE
   Dshi_1416 NONE
   Dshi_1417 1471601 .. 1471614 +  -2.3  -3.53224   AGCCATATCCGCGCT               CCGCT TGCA GGTGG                TTTGCGCGCGGGGTA  47 247
   Dshi_1419 1472191 .. 1472217 + -12.2  -2.63102   GGTCGAGGAAGGAGA         TCGCGGCCCAGC GCC GTTGGGCCACGG         TGATCTGCGGGTGGT  64 200
   Dshi_1421 NONE
       rbsA3 NONE
       rbsB2 NONE
       rbsC1 NONE
   Dshi_1425 NONE
   Dshi_1426 NONE
        citF 1483031 .. 1483059 +  -9.6  -3.36749   AGATCATGTCACCCG       CGCGCCAACCGAT CATC AT-GGTCGGCGCG        TTGGTGTTGGAGGTG  63 148
   Dshi_1432 1489445 .. 1489459 +  -2.7   -4.1822   TTTGGGCATCAACGC               GCAGC TTTAC GCCGC               TTTCTTCGAGTACGG  59 100
   Dshi_1433 NONE
   Dshi_1434 1490516 .. 1490551 +    -3  -2.91264   GCCCGGGACCACGGC    GAGCTGCGCGCTCGGA ATGG TCCGCCAGAGCTGCTC     TATCTGGCTCCAGCC  41 142
   Dshi_1440 NONE
   Dshi_1441 NONE
   Dshi_1442 NONE
   Dshi_1443 1500866 .. 1500891 + -16.1  -3.13737   CGCGCATGACTTTCG         CCCGGGGCGTG CATC TGCGCCCCGGG          TCCTTTTCAGTATTC  86 47
   Dshi_1444 1503579 .. 1503594 +  -3.2  -3.02144   ACCAAGCCCGCTTTC              TGAGAG GAAC CTCCCA               TGTTCAAGACCCTGC  43 23
        uspG 1504031 .. 1504044 +  -3.1  -3.01924   TGGAGAGGCCTGATC               CATGG CCGG TCATG                TCTTCGGACGCAGTG  43 28
   Dshi_1446 1505816 .. 1505837 +  -2.9  -3.54424   GAACTCTCATCCAGC           CGCGA-CCGG AGC CCGGATGGTG           TTTACGCCGATCGGC  51 475
   Dshi_1448 1507101 .. 1507111 +  -8.2  -3.61398   CATGGGGCGTGGCGC                 CCGC GAG GCGG                 TTATTGCCCCGCACG  62 402
   Dshi_1455 NONE
   Dshi_1456 1514590 .. 1514604 +   -10  -3.53012   GTGCAGCGGATCAAA               CGATCC GGG GGATCG               TTTGAAGGCGCAGAA  68 6
   Dshi_1457 1516373 .. 1516384 +  -5.8   -4.0492   GACAGTTTCATGGGC                GTGG TGGT CCAC                 TTTGTGTCGCACTTG  65 376
   Dshi_1459 1517519 .. 1517531 +  -6.2  -3.17075   CCCAAGCCCCCCGAG                GCCC GGACG GGGC                TTGACTTGCAAGGGG  51 43
        rplU NONE
        rpmA 1518675 .. 1518697 + -16.3  -4.67038   AACACGCGTCCTGAC           GGACCGGCC CCAAA GGCCGGTCC           TTTTCGTTTTGGCCC 100 58
   Dshi_1462 1519352 .. 1519374 +  -3.4  -2.52464   CCAGCGTCCTTTATG           TGCTGTTC GGAGGAG GACCAGCA           TGAGTTACGAAACGA  39 0
   Dshi_1463 NONE
   Dshi_1464 NONE
   Dshi_1465 NONE
        obgE NONE
        proB 1523150 .. 1523168 +  -3.1  -4.11216   TATGCCACTTTATTA             GCCTTAT ACGAC AAAAGGC             TTTTAACCATGAAAC  61 96
   Dshi_1468 1523831 .. 1523851 + -11.8  -4.93365   GGCCATCAGATCGAA            GCCCCGGT TTCGC GCCGGGGC            TTTTTCGTTGTCGGC 100 44
        proA 1525298 .. 1525318 +  -8.1  -3.58726   TGCACCTGTGCGGGC            CGGACCCCG TCC CAGGGGCCG            TTCTGTGTCAGCCCC  60 143
   Dshi_1471 NONE
   Dshi_1472 NONE
   Dshi_1473 NONE
   Dshi_1477 1533364 .. 1533415 +  -6.3  -2.87463   GCACTGAAATCGCCC CGACCGGGCGCTGTCCGACCGCG TCGGAT CGCTGTCGGACAGGTGTCGGCCA TGTGTCGGGCACCTT  50 34
   Dshi_1480 1536115 .. 1536143 + -11.6  -5.40072   CCATTTTGATGACCG        GGGTTCGGGCGG CGCAT CCGTCCGGCCCC        TTTTTTTCCGCCGCG 100 63
   Dshi_1481 NONE
   Dshi_1482 1538290 .. 1538301 +  -4.4  -3.42354   GATTCAAAATCCCCC                GATG GCAA CATC                 TTGTCGGTTCGAGTC  51 122
        pyrH 1553492 .. 1553517 +  -5.4  -2.52015   CGCGGCACGGGGTGG        CGTGGGCG-GGC CACA GCTTCGCCC-CG         ATTGCTCGCTATACA  43 49
         frr 1554173 .. 1554193 + -18.3  -4.06419   AGGTCTGAGACCGAG            CCCCGCCTG ACC CAGGCGGGG            TTGTTTGTAACCGGG 100 33
        uppS NONE
       cdsA1 NONE
         dxr NONE
        ecfE 1558593 .. 1558645 +  -8.3  -3.76885   TCCTCGGCACGTCTT TGCTC-ACCGGCCTCTGACCGGCCG CGCCC CGGCCCGGC-GAGGCCGCAAGGGCA TGTATTTTTTTGCAC  69 240
        yaeT NONE
   Dshi_1500 NONE
        fabZ NONE
        lpxA NONE
   Dshi_1503 1563810 .. 1563820 +  -4.6  -3.17051   CGATCTGGGGCGTGA                 CGTG ATG CGCG                 TGTTCCTGATCGCGG  48 21
        lpxB 1565027 .. 1565059 + -11.1  -3.53444   CGACGGGCACGAGTG      CGCGCACGGGCGCGG GGG TCGCGCCGGTTCGGG      TTTCGGGGAAGATGC  70 96
   Dshi_1507 1567869 .. 1567881 +  -3.4  -4.09739   TTGCAAGAGTATAGA                CAAC CCTGA GTTG                TTTTGGCAAAGTTAA  58 17
        ctrA 1568716 .. 1568746 + -17.7  -3.84451   CCGCACTGGCGACCG       GGACCGTTCTTCG CATGT CGAAGGACGGTCC       TTTCCGTTTCGGCGC 100 51
        ligA 1570950 .. 1570982 +  -6.2  -3.35046   GTTCTGGCGGGGCTT     GCGTGAGCAGCCGCC CCGC GGCG-CTCTTCCCGC      TCTTTGCAGAGCTGG  52 20
        recG 1573403 .. 1573430 + -14.9  -5.72207   AGATCCGCTGCCTTG        CCGCCGC-CTCC TGACC GGAGCGCGGCGG        TTTTTTTGCTTTCAG 100 386
   Dshi_1514 1577569 .. 1577605 + -10.7  -2.53263   CCCTGCGCACCCTCA    CCGCGCCCCTGGGCTGA GGC TCAGACCATGGGCGCCA    TCAATTCGACCTCCG  62 9
   Dshi_1516 1578514 .. 1578548 + -13.5  -3.19463   CGGGACTTGAGATAG     GGAAAACGCGCCTGC GGGTG GCGGGCGCGTTAACC     TTAATACCTGGTGAA  76 81
        yliI 1585782 .. 1585809 +  -8.4  -3.31144   CGAGAACTGCGAGGT        CGCGTTGGGG AACACCAC CTCCAGCGCG         TTCTGGCAATCCCCC  58 361
        aroH 1588719 .. 1588746 +   -22  -3.47078   CGATCCAGGGCAACG        CGCCGCCGTCCC GACA GGGGCGGCGGCG         TTGTCATGTCGGGTC 100 50
   Dshi_1528 1590565 .. 1590586 +  -6.6  -2.62184   CTCGAATAGCGCGGT           GGTTGC-CC TGCGC GGCGCAACC           TCCTATGCAACGGCA  48 32
         gmk NONE
   Dshi_1530 1591808 .. 1591821 +  -4.5  -3.53012   GCTCTGAGACTGTTG               C-GCGG AAG CCGCAG               TTTGGCCGGCCGCGG  51 34
        phoR 1593694 .. 1593705 +  -4.4  -2.69471   GATCAACCTAGGAGA                GCAT CGTC ATGC                 ATTCTGTCAAACTCG  42 170
   Dshi_1533 1594739 .. 1594772 + -21.8  -3.54488   GTAAACCCCGATCCC     GGGACCGGAGGGGC CGCCAC GCCCCTCCGGTTCC      TCTTCTTTGCCCCGA 100 37
        pstC NONE
        pstA NONE
        pstB NONE
        phoU NONE
        phoB 1599828 .. 1599863 +  -5.9  -3.53012   CAGGCTACGCGCTCG    GCTGAGCGCCCGGCG CCTTCC CGCCGACCGCGCAAC     TTTCGCACCCGCGCA  55 21
   Dshi_1539 NONE
   Dshi_1540 1602041 .. 1602061 +  -2.5  -3.01712   GGTCCGCGTCACCCT            GGCCG CGCCCTGACAC CGGCC            TGTTGCACCCAAGGG  41 13
   Dshi_1541 NONE
   Dshi_1542 1604991 .. 1605015 +  -4.9  -2.71681   ATGGGCCAGCTCCTG          GATCAGCGACG AGT TGAAGCTGATC          TCGTTGACCCGATTC  43 305
   Dshi_1545 1608709 .. 1608737 +  -2.5  -3.05715   CGCAACGCTCGCACT        GTCCATGAAAT ATGCACG ATTTCATGCGC        TTGCCTGGGGGCATT  41 47
        rpsB 1611846 .. 1611893 +  -2.3  -3.33744   CGACGGCCCCGATGC GGAACCGAGATGCGGACCGGG CACGAC CCCGGTCCGCCCCCATGACCC CTTTTTCAGGAGACA  45 53
         tsf 1612813 .. 1612830 + -10.5  -5.45652   CCACGGCTTTTCAAA             GGGTCCC TTCG GGGGCCC              TTTTTTATTAGGGCT 100 49
   Dshi_1552 NONE
   Dshi_1553 NONE
   Dshi_1554 1617263 .. 1617288 + -10.5  -3.30124   CCCAGAGGATGCTGG         CGTCATCTTCG CTGA TGGAGATGACG          TTGTGGCCCATGGAG  63 127
   Dshi_1556 NONE
   Dshi_1557 1620378 .. 1620390 +  -3.3   -2.7127   TTGGCTTCGGGGCAT                CGGGG TCT CCTTG                GTTATGATTAAATCC  40 313
   Dshi_1559 1621755 .. 1621771 + -11.5  -3.07013   CTGGTCGCGCCGGGC              CCGGGTG TGA CGCCCGG              TATCTTGCGCGACTC  66 79
   Dshi_1560 1622363 .. 1622387 + -16.4   -4.4078   CGCGTGCCCCGCTCA          GCCCGGTCGC CTACT GCGGCCGGGC          TTTTGCTTGGCAGCC 100 118
       hemB1 1628098 .. 1628130 +    -4  -3.53012   CCCCATAAGAGGCAT     CCGCCACGGGCAC ATGACGGC GCGCGCG-GGCGG      TTTCAGGACAAAGAG  51 157
   Dshi_1564 NONE
   Dshi_1565 1631341 .. 1631356 + -10.4  -3.18383   GGTGCGTGCTGGCAA              GGCGCT TCGA AGCGCC               TTGGTCCCTGCACGT  64 84
   Dshi_1570 1636539 .. 1636568 +  -2.8  -3.53012   TGTGCCCGATGTCGG       CCCGGTGGTGTT GAGCGG AACATGAGCGGG        TTTCGGGAGGAAGGC  49 1
   Dshi_1571 1637079 .. 1637099 +  -9.6  -3.28712   TGCGCGTCGCCCGAT            GCGAGGGG GCTGG CCCCGCGC            TTGTCGCCCGGACCA  63 81
       ispDF NONE
   Dshi_1578 NONE
   Dshi_1579 1646691 .. 1646720 +  -4.1  -4.56597   GTCGGCGGCTCAGGC       CGCAGCGGGGCCGT AAA GCGCCTCGGC-GCG       TTTTTCGAAAGCGCG  72 10
         hpt 1647812 .. 1647844 + -10.4  -3.16039   TGGTTTCTGCGGATG      GCACGGTGGGTGCG TCACC CGCCCTCGCCGGGC      TTGGTCAAGCTGGTT  64 77
   Dshi_1585 1651450 .. 1651468 + -12.4  -4.79756   GAGCCCTCAGATGAA             GGCGTCCG GCA TGGACGCC             TTTTTACGTTCTATA 100 52
        guaA NONE
   Dshi_1588 NONE
   Dshi_1589 1656241 .. 1656257 +    -5  -3.42056   TCGAGCGCCCCAAAC              CGCGTC CTGAC GCCGCG              TTATAGATTGACGGT  53 3
   Dshi_1590 1657494 .. 1657513 + -16.4  -5.27335   TGAATCTGTGTCACG            CCCCGCCG GTTT CGGCGGGG             TTTTTCTTTGCGCAG 100 47
   Dshi_1591 NONE
   Dshi_1592 NONE
        metA NONE
   Dshi_1594 NONE
   Dshi_1595 NONE
   Dshi_1596 1662918 .. 1662940 +  -6.1  -3.72324   TGCGCGCGCCGGGAT           CGAGCACGG GAATG CCGGGCCCG           TTCTTCATGGCGATC  59 102
   Dshi_1604 1668656 .. 1668680 +  -5.6  -3.01712   TCAGAGCGTGCCGAG          GATGCGCCGC ACATA GTTGCGCGTC          TCTTCGAAGGGGGGC  49 47
         ssb 1669958 .. 1669976 + -10.2  -2.85351   ACCTGACGCCGGGTG             CCCTGCGC TCA GAGCAGGG             TGTCCTCTGCGACAC  61 67
   Dshi_1610 1674949 .. 1674962 +  -2.3  -2.54896   TGCTCTTGCGGGACC               GGGTC GGAT GAGCC                TGCATTGGATCGACG  38 15
        xerD 1675920 .. 1675934 +  -3.4  -4.13282   GAAGAACGTCCTCGC               TCGGCC AGA GCCCGG               TTTTCAGCGTGTCAT  59 63
   Dshi_1613 1678540 .. 1678552 +  -6.9   -3.7108   TCCCCCGTGCCCACC                TCGCG GAT CGCGG                TTTCGATGTCGAGGT  61 509
   Dshi_1615 1680904 .. 1680915 +  -4.4  -3.72576   GCCGCCGATCAGGTG                TCCA TGCA TGGA                 TTTGGTGGAGGACAG  55 257
   Dshi_1620 1686250 .. 1686261 +  -3.6  -3.36273   TCCGCAGCACATGAA                GGGT TTTG GCCC                 TTCCTGTTGCGAAGG  49 431
   Dshi_1634 NONE
   Dshi_1635 1698746 .. 1698759 +  -9.5  -3.17146   ACAGCTTATGCCGAC               CCGCG ACGG CGCGG                TCTCTTGTGCGGGGC  61 45
   Dshi_1636 1699565 .. 1699581 +  -2.9  -3.53012   TCAAGCCTGCTCGCT              CGCGCAA GAA TTGTCCG              TTTGACCACAAAGCC  49 50
   Dshi_1637 1700303 .. 1700322 +  -8.6  -3.54638   TCGGAAACGCTATAT            CGCGACGTG ACT CACGTC-CG            TTTAGGGAGGCTTGT  65 16
        emrE NONE
   Dshi_1639 NONE
   Dshi_1640 1701623 .. 1701655 +    -9   -3.7282   CACGATCACGAGTTC      GCGCTCGGCCGCGC CACGC GCGTAGCTGAGGGC      TTCTTGGTAGGCTGA  68 74
   Dshi_1653 NONE
        bglA 1721193 .. 1721208 +  -2.4  -2.60244   AAACGATCAGTGATT              CCGCGG AGCC CTGCGA               TGACTTCCTTGCGAG  38 50
         glk 1722180 .. 1722203 +  -3.1  -3.31726   CGCTGCCGCAACTAA         G-GGGCCG-GC AAAG GCTCGGTCCGC          TGTTCTGTCCGGCCC  46 26
   Dshi_1661 NONE
   Dshi_1662 1728515 .. 1728561 + -15.4  -5.71638   GATTTCCGGAGCAAA GCCGC-TCAACC-G-CTTGCGTC ACAT GACGCGAGACAGGTTGATGCGGC TTTTTTTGATTCTTG 100 187
   Dshi_1663 1730017 .. 1730054 +  -6.9  -3.02511   GCCCTCGCGGGGTGC   ATCCCGCCCGCAG TTCTCCTGACCC CTGCGGGCGGGCC    TATTCCCCGAATGCC  51 58
   Dshi_1664 NONE
   Dshi_1665 1732999 .. 1733019 +  -3.1  -2.91264   TGCGCAGACTGGGCC            CCTCACCTG CAC CAGCCGGGG            TCTGTCCATGACGCA  42 126
   Dshi_1666 NONE
        nasD NONE
        nasE NONE
        nasA NONE
   Dshi_1670 NONE
        cysG 1741312 .. 1741334 + -12.2  -2.96007   CAGGCTGAGCGCAGA           CAAGGATTTT CAA AAAATCCTTG           TGATTACTTTTACTT  67 33
   Dshi_1674 1743836 .. 1743860 +  -4.4   -3.1207   TGGGCCTGACCCCCC         GCCGGATCAAGG AGG CCTTGAT--GGC         TCTGTTGCAGTTTCG  47 32
   Dshi_1675 NONE
   Dshi_1676 NONE
   Dshi_1677 NONE
   Dshi_1678 1747278 .. 1747295 +  -5.5    -3.741   ATTGCCTTGACTTTT             TCGATGC AATC GCTTCGA              TCTTTTCGGTGTTGG  60 97
   Dshi_1679 1748042 .. 1748074 +  -4.9  -3.17797   GAAAATGACACCTCC    GGGGTCGGCTTTGGGC TTTA GCCT---GCCGACCCC     TTCGCTATCTATGGC  48 84
   Dshi_1680 1750268 .. 1750278 +  -5.4  -3.18199   AAAGGTATCACGCGA                 GCTT CCC AAGC                 TTAAGTTACGGGTTC  48 102
   Dshi_1681 1750874 .. 1750902 +  -2.9  -3.34013   GCCGAGACCTCGCCA        GTGACCACCGGGC CAA GCGCGGTGGCGAG        TTCCTTGCCCAACTC  46 89
   Dshi_1685 1755806 .. 1755820 +  -3.4  -3.64703   ATTGCGAGATCAGCA               TCGCGG GGC CCTCGG               TTTCCATGAAGGCCA  53 74
       cobA1 NONE
        cobB NONE
   Dshi_1694 1764102 .. 1764115 +  -3.9  -4.09685   AAATCCTTGGCAAAA               CTTTT TGAT AAAAG                TTTTGCGCGCTACCA  61 72
   Dshi_1700 NONE
   Dshi_1704 NONE
   Dshi_1705 1774037 .. 1774053 +  -3.6  -3.22102   GCAATGCACCTCCGT              GCGGGT CATGA ACCAGC              TCTTGTCCACGCTCT  47 111
   Dshi_1707 1775169 .. 1775181 +  -9.1  -4.32177   CGCGGCCGCTTAGGC                GCCCA TGC TGGGC                TTTCTTCTGAAATCC  83 28
   Dshi_1708 1775970 .. 1776005 +  -2.4  -3.92522   CCTTCCAAGAGCCAT    GCGCGCACGAGGTTGAG TTG CGGAACCGCGT-CGCTC    TTTCTGGCGTTCCCG  54 43
   Dshi_1714 1783506 .. 1783521 +    -6  -3.16564   ACCCCTGCCCCCCTT              GCCGCC GCCC GGCAGC               TTGCTAGGCTCGCGC  51 159
   Dshi_1715 1784497 .. 1784539 +  -4.1  -3.21924   TCGGTGACCCGGCGG TTGAGCGAGATC-ACCTCGCC ATC GGCCAGGGAGAAC-CGCTCGA TATTCTGCACGGTGC  47 119
   Dshi_1717 1785750 .. 1785766 +  -9.3  -4.07568   CCCGGCCTCGCTCTC              ACCCCGC GCG GCGGGGA              TTTTGCGCGCAAGAG  76 153
        rpmF 1786043 .. 1786061 +  -7.3  -2.57132   CGATCTCGACGAAGA             CGCGGCC TGAGC GGCCACG             GTTGTCAAAAACCGG  51 16
        plsX NONE
        fabH NONE
        ihfA NONE
   Dshi_1722 1789451 .. 1789472 +  -4.3  -2.57132   GGGGGGCGAAATTCG           GCTTGCCCC CGGC GTGGAAAGC            GTTATGAACGCCGCA  41 70
   Dshi_1723 1790751 .. 1790794 + -11.4  -3.08966   CAGATCCGGGGCGAA GGGGGCGCGGGCAGCGGCGC GGCT GTTGCGCAGCGCGCGCCCCG TTAACTAGAATTTCG  66 54
   Dshi_1730 1798000 .. 1798034 + -17.2  -4.08692   GACCCCGACCTTGAA     CGACAAAGGCCCGG CGCATGT CCGGGCCTTCGTCG     TTTTCGCAGGGCTTA 100 41
        tktA 1805678 .. 1805700 +  -7.6  -4.56775   CCAGATCGATCCGAA           CACCCGCC CTCACCC GGCGGGCG           TTTTTCCGCGGCCCT  83 56
        gap2 1808009 .. 1808037 + -11.6  -3.09327   TGATCTGACGCACGT        CCCGCTGCGGCG CGCGT CGCCGCAGGGAG        TGTTGACTCACGTGA  68 33
   Dshi_1741 1808218 .. 1808230 +  -4.7  -4.17316   ACACCCGGGCTGATT                TCCGC GCG GCGGC                TTGTTTTCGAAGAAT  65 51
        gap1 NONE
        mmsA 1813858 .. 1813875 + -12.7  -5.37593   ACCGCCAACAAAAAA             GGCAGCC CAAA GGCTGCC              TTTTTTCATTTCAGG 100 52
   Dshi_1749 NONE
   Dshi_1750 NONE
   Dshi_1751 NONE
        mmsB 1819419 .. 1819455 +  -5.3  -3.28712   GGGCACAGCCTCCCA  GATCAT-GC-C-CCAGGC GTCG GCCTGGCGCGCGGTGATC   TTGTCGGCGAAAAGC  51 333
   Dshi_1763 1829802 .. 1829821 + -10.7  -6.07627   TCCCTGTTGGACTTT            GGCCGAG CTTTGT CTCGGCC             TTTTTTTTTGCCCAT 100 165
   Dshi_1764 1830680 .. 1830700 +    -9  -2.74701   GACCGGCCTTCCTGG           CGCCGGCCT GATC AGGCCG-CG            TCCTCTTCGGCATCT  57 15
   Dshi_1767 1835254 .. 1835266 +  -4.7  -3.64703   GATGGATTTCAGCGC                AGGCG CGC CGCCA                TTTGCCTCCGCCGGA  55 414
   Dshi_1770 1837919 .. 1837958 + -23.7  -3.45945   TCCCGAGACGGGTTC  CGGACGCGCCGCGTG ACCTCCTCCC CACGCGGCGCGTCCG   TTCGTTCTGCCTGCG 100 46
   Dshi_1771 NONE
   Dshi_1772 1840266 .. 1840288 +  -3.2  -2.57132   AACCGCCCCAGCACC           GTGGCCAGCG CCA CGCGGATCGC           GTTCTGGCCGGAAAA  39 519
   Dshi_1776 1844569 .. 1844592 +   -21  -4.67608   CACCGCACGACAAAA          CGCCCCCCGG TTTC CCGGGGGGCG           TTTTCTGTTCAAATA 100 53
   Dshi_1778 1848247 .. 1848266 +  -7.8  -5.60993   CCGATCCCCCGTGCG            CCCCCG AAAACGAC CGGGGG             TTTTTTTATGCCCAA 100 266
        ilvI NONE
   Dshi_1780 NONE
        ilvH NONE
   Dshi_1782 1852770 .. 1852793 +    -3  -4.72863   CCACCAGGGCCATTG          CCGCGACACT GCTC AGGATCGTGG           TTTTCATTTCTTTGG  75 493
   Dshi_1784 1853959 .. 1853990 + -10.2  -3.95584   ACCTTCCCGGTCCCG      CTCCCAAGAGCCTT AAGC AAGGCTCTTGGCAA       TTTCCTTGCTCAAGG  76 407
   Dshi_1786 1859333 .. 1859346 +  -5.2  -3.34192   ACCAGGCTGCGCTAC               GCCC CGACGA GGGC                TTCCTTAGACAGGTT  50 261
       fabI2 NONE
   Dshi_1791 1862653 .. 1862685 +  -6.7  -2.57757   CCTGCGGCTTCTGGC      GGAGCGGGCCCCGTG ACG CTCGCGGCCTTCGCC      TCGATTGCCTTCATT  48 10
   Dshi_1792 1863256 .. 1863268 + -10.5   -2.5409   CTGGCCCTGGTGGGG                GCGCG GAT CGCGC                TGAGTTGAGGGTTCT  59 5
         gpt NONE
   Dshi_1794 NONE
   Dshi_1795 NONE
        trpE 1868695 .. 1868719 +  -4.9  -2.74263   AACGCCTTGGACAAG          CGCCTTGCAAG GCG CTTGGGACGCG          ATTTCCAAATCGCGT  44 80
        trpG NONE
        trpD NONE
        trpC NONE
        moaC NONE
       moeA1 1874966 .. 1874976 +  -3.2  -4.07568   TTAAGACCTTGTTTA                 CCAG TTC TTGG                 TTTTACCAGGGCGCG  58 103
        lexA 1876123 .. 1876135 + -10.5  -3.01712   CAGGCCCCGGTGCTG                CGCGG CAG CCGCG                TGTTGGCCACCACCA  60 410
        gltX NONE
       gltA2 1880975 .. 1880994 + -12.8  -5.27335   TGCCAGCACATCAAG            GGCCGTCC TTCG GGGCGGCC             TTTTTCTTTGAGCAG 100 57
   Dshi_1807 NONE
   Dshi_1808 1883203 .. 1883238 + -10.2  -3.75581   AGTTCAAGGAATAAT    CGCACCGGGGCCGCCT GTCC GGGCGGCCTCGCCCCG     TCTTCTTTTGTGCCG  74 27
   Dshi_1814 1893063 .. 1893073 +  -8.2  -3.72576   TGCGCATCTGTTCGC                 GCCG AGG CGGC                 TTTGATCGCGGGCCA  69 225
   Dshi_1820 NONE
   Dshi_1821 NONE
   Dshi_1822 1901555 .. 1901568 +  -2.3   -4.6902   TGATGGAACGCGCCA               GCGCT TCGT AGAGC                TTTTTCAGGTTATGA  70 374
   Dshi_1835 1916218 .. 1916228 +  -8.2  -4.07568   ATTTCCGCGTGGCAG                 CGCG AGG CGCG                 TTTTGAGAACGAGCG  73 56
   Dshi_1836 1918185 .. 1918206 +  -5.1  -3.14132   CGCCAGCCAGGGGGC           CGCGCGCG CATAGGC CGC-CGCG           TTGATCGCACAGCGC  49 234
   Dshi_1838 NONE
        glnA 1921554 .. 1921571 + -14.1  -4.18018   GGGAGCGGATAGAAA             GGGCGCC TTCG GGCGCCC              TTTTGCATGGCGCAC  93 47
   Dshi_1840 1923239 .. 1923254 +    -6  -3.05384   CCGGCGCGCAGAAAT              GGGCCG CCTC CGGCCG               TTCGCTCAGCGCGAA  49 348
        purB 1924951 .. 1924962 +  -2.2  -3.68529   ATCGCAGAAAAGGCT                TTGC AGGC GCGA                 TTTCCGTGCTACCGT  52 69
   Dshi_1843 1925201 .. 1925220 +  -9.2  -4.54727   TTGGAATTCCGGAAA            CGGTCCGT TACG GCGGGCCG             TTTTCATTTGCAGCC  91 52
   Dshi_1844 NONE
   Dshi_1845 1926997 .. 1927035 +  -9.4  -2.62263   CATTCCACCTCACTC  CGGCAGCGCCCGCCGGC GTCCTG GGCGACGGCCGC-GCCG   TGATATAGCCACCCT  56 104
   Dshi_1846 1927750 .. 1927782 + -16.3  -5.40072   AGCTTCTGAGCCTGG      GCCGCCGCGCG GGTCCTCCCAG CGCGCGGCGGC      TTTTTTTGCCGGGCA 100 32
   Dshi_1847 NONE
   Dshi_1848 NONE
        nthA 1929122 .. 1929146 +  -6.9  -3.28712   TTCCACCCGCGCAGC          GGCCACCATCG GCC CGTGGGAGGCC          TTCTGCACCAACACC  55 53
        acnA 1932841 .. 1932858 + -14.1  -4.07885   GCACCGACCCGGACA             GGGCGCC TTCG GGCGCCC              TTTTCCCGCGCGGTC  90 49
   Dshi_1861 NONE
   Dshi_1862 1941185 .. 1941200 +  -4.6  -5.03314   TCTGTAAAGTGTTGT              CGCTAG AAGC CTCGCG               TTTTTTAAGAATAGG  83 96
        serS 1942732 .. 1942744 +  -2.6  -2.64794   CGGACGCGGATCGAC                GCTC AGGGG GGGC                TCGTCTGAGATTGCA  38 5
   Dshi_1864 1943967 .. 1943985 +  -2.3  -4.29738   ATCGAAAAGCCTTTG            GCGCGGAC AATC GACCG-GC             TTTTCGTACATCTCG  62 66
   Dshi_1875 NONE
   Dshi_1876 1955128 .. 1955147 +  -5.6  -3.14132   GGATCAGCAGCGCCT            CGGTCGCG GTGC CGCCATCG             TTGATGCCGGGCGAC  49 398
   Dshi_1884 1962149 .. 1962170 + -11.6  -5.45802   TCACAGTTTCACAGA           CACCGGAG CCCTGC CTCCGGTG            TTTTTGTTTTCGGGC 100 86
   Dshi_1885 1963792 .. 1963808 +    -5  -4.02456   GCGCGGGTCTTCAGC              CGGGCC ATCCA GGCCAG              TTTGTAGTCGTATTT  61 427
   Dshi_1891 NONE
   Dshi_1892 NONE
   Dshi_1893 NONE
   Dshi_1894 1973825 .. 1973836 +  -5.8  -3.28712   GCCATGATCGGGAAG                GAGG CGGG CCTC                 TTCTGACGCCCGCCC  52 8
        algC 1984215 .. 1984237 + -17.7  -2.86564   ACGCAAAGTCGTGAA           CGCCCGGCG CATCC CGCCGGGCG           CTTTGCGTTCCGTTG  90 52
   Dshi_1901 1984942 .. 1984973 +    -5  -4.67641   TTCGGCGCGACACTC      GGCGGGTCGTGAGA TGGT TTTCTCGACCCCCA       TTTTCCTTTTCGGGT  78 14
   Dshi_1902 NONE
   Dshi_1903 NONE
   Dshi_1904 1988856 .. 1988896 + -12.5  -4.93365   CATGTCCGAAAGCAT GGTCGCAGCCGCGCACGG CTCTTT CCGTGCAAGGC-GCGGCC  TTTTTCGTTGTAGAG 100 218
   Dshi_1905 NONE
   Dshi_1906 1990876 .. 1990899 +  -9.7  -3.38272   CGCGAAAGGACGAGC          GCGACTTAT CGGGTC ATAAGTCGC           TTATACATGGTCGTC  63 60
   Dshi_1907 1992497 .. 1992508 +    -3  -3.72695   AGGACGCGGATACGC                TGAA ATCG TTCA                 TTTCGTCGCCGGGCT  54 108
   Dshi_1908 1993311 .. 1993333 +  -5.5  -5.37593   GTCACGGTCGAGAAA           GGCGTGTCA GGGGG TGACGGGCC           TTTTTTGCTTTCGGG  91 52
   Dshi_1910 NONE
   Dshi_1911 NONE
   Dshi_1912 1996749 .. 1996760 +  -2.2   -3.8448   GCGTTTATAGGTTAG                CTCT GTTC AGGG                 TTTGGTCCTCTCTTG  54 31
   Dshi_1915 NONE
   Dshi_1916 1999909 .. 1999927 +    -6  -3.31501   GAGGCAGCAAGGGTT             CATATCGT CAT ACGACATG             TTGTGCACGCTTCAT  52 80
   Dshi_1917 2001477 .. 2001500 +  -8.2  -3.48395   TCACTTCGTGGGAGG          GCGATAC-CCT TGT AGGAGTGTCGC          TTATGTCCCGCGGAT  63 124
   Dshi_1918 NONE
   Dshi_1919 2004883 .. 2004900 +  -8.3   -2.5632   GTTGCAAAAGCAAAA             ACCGCCC CGGA GGGCGGC              CTTGATACTCTCTTG  53 487
   Dshi_1921 2007844 .. 2007854 +  -2.4  -4.08216   GAGTTACGCCCTGCT                 ACGC CAC GCGA                 TTTTCGGAGCCGTGA  57 523
   Dshi_1923 NONE
   Dshi_1924 2010210 .. 2010231 +  -7.9  -2.79796   GGCTGCTGAGCGAAA           CCGGGCCGCG CGC CG-GGACCGG           TCTAATCCCCTGCCC  52 32
         tal NONE
   Dshi_1928 NONE
        xerC NONE
   Dshi_1934 NONE
        truA 2028619 .. 2028660 +  -2.1  -4.07568   TGCCGATGAAGGCGA GCGTGACGGAGACCTTCAGG GCG CC-GAAGAACTCCGGCAGGG TTTTCGGCAGGGCGA  58 351
   Dshi_1950 2042281 .. 2042297 +  -7.9  -3.35996   CCTGGAGGTATTTCC              CGCGCAG AAG CTGCACG              TTCTCGGTCACGATC  59 446
   Dshi_1952 NONE
   Dshi_1953 NONE
   Dshi_1954 2048163 .. 2048177 +  -8.5  -2.62616   GCGGTCAGGCGGAGG               CCGGG GTCAG CCCGG               TGATCTGCGCGCTCC  53 41
   Dshi_1972 NONE
   Dshi_1973 NONE
   Dshi_1974 2088669 .. 2088680 +  -7.2  -3.12162   CTGGACCGCTGACAG                GGCG CGCA CGCC                 TCTCCTTCTTTTGTG  56 29
   Dshi_1984 NONE
   Dshi_1985 2099352 .. 2099375 +  -3.7  -2.78813   AAAATCCAATCACGC          GACGTGCGC AGCACG GCGCAAGGC           CTTCTTGGCATGACA  42 161
         icd 2102056 .. 2102086 + -16.8  -3.96148   ATTGTCCGGCGCGGC       CGCGACCGGGTGCG CCC CGCACACGGTCCCG       TTTGTAATCCGGCCG  95 265
   Dshi_1987 NONE
   Dshi_1988 NONE
   Dshi_1989 2104735 .. 2104747 +  -6.2  -2.56122   TGGTCTGCGGATGTC                GCGC CGGAT GCGC                CCTTTTATCCTGCGC  46 308
   Dshi_1995 2114868 .. 2114878 +  -2.4  -2.63073   CGTAATAGGCCAGCG                 CCAC CTC GGGG                 ATGTTGTTCGGGAAC  38 512
   Dshi_2001 NONE
   Dshi_2002 2123762 .. 2123790 +  -5.2  -3.14878   TGTCTCGCGCGCAGG       CGCCG-CGCGGTC GCCA GACCCTGTCGGTG        TGTTACGTTCGACAG  48 410
   Dshi_2003 NONE
   Dshi_2004 2125340 .. 2125354 +  -2.1  -3.59979   GGAAACGGCGAGGTC              GGG-CA GCAC TGTCCC               TTTCGGATCGAACCG  48 411
   Dshi_2008 NONE
   Dshi_2009 2129636 .. 2129667 + -19.4  -5.02074   TGATCTGAAACCATG      GCGCGTGGCGGGCC GGTC GGTCCGCCACGCCC       TTTTTTGCGGGGTGG 100 38
       phnC1 NONE
   Dshi_2011 NONE
   Dshi_2012 2132087 .. 2132099 +  -3.3  -2.91873   TGGGTCTCGGCCAAG                GTGCG GGG CGCAA                TCATTTGACCCTGAT  42 5
   Dshi_2013 NONE
       ugpB1 2134433 .. 2134458 + -14.7  -3.53012   CGAGAAGGTGACATG         GGGGCGGGCAT GGCG GTGCCCGTCCC          TTTCGACGCCGAGGG  83 71
       ugpA4 NONE
       ugpE3 NONE
       ugpC4 2137257 .. 2137297 +  -3.8  -3.07994   GAAGGCGGTGCAGGC CAGCGA-CCGCCCCG-GCCG TTG CGGCGCGGGGGGGATAGGCG TTCGGTGAGATTGCG  45 65
   Dshi_2018 2137765 .. 2137795 +  -7.4  -3.14132   CATTTGCATCGGCGC       GGCGCCAACGGC GCAGGTA GCCGAAGGCGTC       TTCCTCCCCGCGCAG  54 158
   Dshi_2021 2142338 .. 2142363 + -18.3  -4.25104   TTCGGGACCTTCGGT         CGGGCGCGGTT TTCG GACCGCGCCCG          TTTTCGTGACACGGA 100 51
   Dshi_2022 2142900 .. 2142918 +  -3.8  -3.25823   TCAGCAGGCTGGGCA            CGGC-CG CCCCTT CGAGCCG             TTCGTCTGAGGCCAG  47 110
   Dshi_2030 NONE
   Dshi_2031 2151819 .. 2151829 +  -8.2  -3.57144   GAGGCGCCCGAGATC                 GGGC TGG GCCC                 TTTCGGGGTCGGGGA  65 110
   Dshi_2032 NONE
   Dshi_2033 NONE
       hisD2 NONE
   Dshi_2035 NONE
   Dshi_2036 NONE
   Dshi_2037 NONE
   Dshi_2038 2158268 .. 2158295 + -21.3  -3.05769   CTCGGCGTAACGATC        CGGGCGCGCGG CAGTGT CCGCGCGCCCG         TCTCTCCTTTCGAAG 100 31
   Dshi_2039 NONE
   Dshi_2040 2159947 .. 2159979 +  -3.9  -3.31144   GCCGCCAGCCTCCCC      TGCCGGGCATGTCGC TTC GCGATCAGCCGCGCA      TTCTCCGGATCCCGG  47 183
   Dshi_2043 NONE
   Dshi_2044 2164126 .. 2164142 +  -3.5  -2.56596   TCTGGTCCTATGTGT              GGTCCGG CTC CCGCTCC              TAGATTGCTCCCAAC  39 54
         xsc NONE
   Dshi_5006 2167189 .. 2167209 +  -6.7  -2.53263   CAAAGAGTTGCTGTG            CCGCCTGGT CGA ACCCGGCGA            TCACTTCGGCCTCGG  47 79
   Dshi_2053 2173568 .. 2173603 +  -5.8  -4.57073   AAAAGGTGCGTCGCG    AACGGCCGGCCCCAAG GAAA CAAGGGGCCGGCCAAC     TTTTTAGGGACCATC  76 137
   Dshi_2056 2176006 .. 2176017 +  -2.2  -4.59853   CCGGCAAACCCTTGC                GCAG TTCT TTGC                 TTTTTAGGACGTTCG  68 69
   Dshi_2057 NONE
   Dshi_2058 NONE
   Dshi_2059 2178031 .. 2178055 +  -3.5  -4.43477   AAGCTGATATCTCAG          CTGAAGTTCGC CAT GCAAATTTCTG          TTTTAATTCCATAAA  67 248
        acnB 2181292 .. 2181307 + -10.4  -3.54459   ATGTCGCGCGACCAA              GGCGCT TGCA AGCGCC               TTTCAAGCGCCTTCG  70 215
        lysC 2182683 .. 2182717 +  -9.1  -4.27062   CCCCCTCCACGCATA    GCGC-CGAGGGCCCGG TCCA CCCAGCCCGCGCGCGC     TTTGATTTTCGTTCC  83 57
        ptsI 2185204 .. 2185219 +  -3.2  -3.39327   CACGGTCTGCCCCTG              CCGGTA ATCA TGCTGG               TTCTCGCTGTCCCAG  48 175
   Dshi_2065 2187331 .. 2187369 +  -8.2  -2.78384   CCAGGAATTACCGAT  GTGGG-GGGACGGGT CTTCTCTGCC ACCCGTCCCTTCCGC   TCTAATCCCAAACCC  54 336
   Dshi_2068 2190072 .. 2190111 + -10.4   -2.6162   CGGGCGTGTGCTCTG  AACGGGCGCGGCGGGGGG CCAG CCCCCCGCACCCCCCGGG   ATATTTCCGGACTTG  59 25
   Dshi_2069 NONE
   Dshi_2070 2191023 .. 2191049 +  -4.4  -3.85698   AGCGGACGCTTTCAA        T-AGGCGCGGC GGGGAG GCCGCGCATCA         TTTCTGGGAGGAAAA  58 23
   Dshi_2071 2191568 .. 2191580 +  -3.4  -3.12351   ATCTCGCAAACGGTT                TCGA CGACA TCGA                TTGGGTCTGAGGGAG  44 3
   Dshi_2072 2193201 .. 2193222 + -17.3  -4.27259   TTTGCCAACACGCAA           GGCCACCCG GCAA CGGGTGGCC            TTTTGCGTATGTCTC 100 50
         apt 2195432 .. 2195465 +  -4.3  -3.86015   CGGCGACTGACCGGC     TCCGCGGCGGGCGTG ATCA CGGGCCTGTCACGGC      TTTGTCACGGGCCTC  58 31
   Dshi_2075 2196107 .. 2196136 + -14.3  -5.00884   CCCTAAGGTTGACTG       ACCCGGC-CCGTGA CCC TCACGGCGCCGGGC       TTTTTTCCCCCGGAT 100 154
        tpiA 2199556 .. 2199572 +  -3.5  -3.72051   AAGAGGCTTTGCCGC              GCGCGGG GCT CAGGCGC              TTTGCGGTTCTTCGG  54 108
        metF 2201608 .. 2201649 + -10.7  -3.89614   GGCATCGGACAGCTC CGCGGCCACCTCCGACATG ATGT CATGCTGGCGCTGGCCTCG  TTTGTACGCCTTGAG  79 170
   Dshi_2083 2204064 .. 2204076 +  -3.3  -3.28712   CCACCCCTTGCGCCG                GATCC GGC GGACC                TTGTCAGGACCGGGC  46 100
   Dshi_2085 2206334 .. 2206353 +   -15  -4.66609   TTCGACCAAGGCGAA            CGGCGCTC TTCG GAGCGCCG             TTTTTACGTCCAGTG 100 51
        valS 2212441 .. 2212458 +  -2.6  -2.72144   GCCGAAGGCACGACG             CCGCGT GCGGAA AAGCGG              GTTTCGAAGAAATCC  39 53
   Dshi_2088 2213919 .. 2213948 +  -4.1  -4.35874   GATCGCTGCCGAAGG       CCCACGAAATCCT AACT GGGATCACGGGGG        TTTTGAGTTATCTTC  66 39
   Dshi_2089 NONE
   Dshi_2092 2217559 .. 2217577 +  -6.7  -3.29144   CATATGTAGTCCTCC             CTGTGGT GGCAG ACCACGG             TTGTCCCGCGCCTGC  55 500
   Dshi_2095 2219003 .. 2219023 + -14.7  -5.14563   GTTTTCGCGATTTAA            CGCGTGTCC GTC GGGCACGCG            TTTTTTCGTGCGGGA 100 54
        cobQ 2220691 .. 2220714 + -11.6  -3.61517   GAGGCGGCGTGCGAC          CAGCGCGTCG ATCT CGGCGCGCAG           TTCTTGCCGGACGAT  72 116
   Dshi_2100 2225515 .. 2225543 + -13.2  -3.23853   CCCGAGAAAACCGCT       GCCGCC-TTGGTG GCTT CGCCAACGGCGGC        TCTTACTTCCGGAGA  73 79
   Dshi_2103 NONE
   Dshi_2104 2231217 .. 2231236 +  -6.3  -3.33261   TGTCCGTGCTGCCAC            GGGGCGG CAACAC CCGCACC             TTGTCGCCCTTGCGG  53 505
   Dshi_2107 2232976 .. 2232990 +  -2.8  -2.84125   GGCCGGGACGATCCC               GTGAAG TTG CTTTGC               CTTTGGCTATCTCAC  42 170
   Dshi_2110 2239583 .. 2239615 +  -9.8  -2.71144   TGGTGGAACGGAACG      CCTTCATGCTCGGC CACGC GCCGGGCATCGGGG      TGGTTCGACACGATC  60 506
   Dshi_2118 2249029 .. 2249044 +  -7.5  -3.21593   CGCGCCCACCCGATA              CCGCC GGATCA GGCGG               TCTTGTCGGCGGATC  56 56
   Dshi_2125 2256615 .. 2256634 +  -2.8  -3.24188   CAAGTGAGGTCCGCT            TGCCGATG ATCA CATTTGCA             TTGCTAATGGTATAA  44 34
   Dshi_2126 2257993 .. 2258023 + -21.2  -2.63596   CGCAGCCTCAAACCC       CGCGACCAGTGCCG ACT TGGCGCTGGTCGCG       TCATGTCGAGTGGCC  91 59
   Dshi_2127 2258818 .. 2258838 +  -2.5   -3.4072   GCGGGCGGCCGTGCG            CCCGG GCCAGCCTCCG CCGGG            TTGTCGTCCCGCGTC  47 56
   Dshi_2128 2259453 .. 2259467 +  -9.2  -3.55563   GACAGGACCCGCACG               GCCCGT GAC GCGGGC               TTTGAGCCGTCCCAT  68 18
   Dshi_2129 NONE
   Dshi_2130 2261730 .. 2261742 +  -4.7  -4.13014   CCGGATTATCGGATG                CGGCG CCG CCCCG                TTTTGGGAGTATCGA  65 311
   Dshi_2131 2262287 .. 2262299 +  -4.7  -3.70438   TAAGCGCGCCCGCGG                CCGCG TCC CGCAG                TTTCCATGATAGTTT  58 82
        purF 2263885 .. 2263920 +  -5.2  -2.99871   AGAAAGGGTTCCAGC    TGCGCCCCGCGGCGGA ATGA TCCGGTTCCGGCCGCA     TCATTTCCTGTGCGC  47 6
   Dshi_2133 2264577 .. 2264596 + -10.6  -3.57263   CTGCACGAACGACAA            CACCGCCC CAAG GGGCGGCG             TTTCGCGATCAGAGT  70 183
   Dshi_2135 2266023 .. 2266049 +  -7.9  -2.59431   TGAGTGCCCTGCGCA        GGGCGGG-GGCG CGCC CGCTGCCCGGCC         TCCCTTGTCCCCGCC  51 38
        surE NONE
         pcm NONE
   Dshi_2138 2268886 .. 2268898 + -10.5  -3.14132   GCCCGCTCAGCGCGC                CCGGC GCG GCCGG                TTGATCAGAACGAGC  64 108
   Dshi_2140 NONE
   Dshi_2141 2272002 .. 2272012 +  -2.4  -3.34895   CCGGGCAGACGGTGC                 AGGC GCG GCCG                 TTCCTTGGCACTGGA  45 59
   Dshi_2142 2272504 .. 2272547 +  -2.8  -3.59979   TGAGGACGCACAAGC CCTGTGCGTCCCGCGCGTTGC CGG GCCTCGCGAAGGCCGC-CATG TTTCCAGTCAGACAG  51 38
   Dshi_2143 2273568 .. 2273583 + -10.4  -3.15544   AAATCGCGTGGTCAA              GCCCGT TCGA ACGGGC               TTCGTCACCCTCAGA  64 106
         eno 2276569 .. 2276592 +  -4.4  -4.54205   GGACGCGCGCCTCGC          CCATTTCCGC GCGG GCGGCGAGGG           TTTCTTTCGTGTGCT  72 481
   Dshi_2148 NONE
   Dshi_2149 2279141 .. 2279163 +  -9.1  -2.89683   CCTCGATCATGTCTC           CGTCGAAGC CGAGC GCATCGACG           TCTGTCACGTCACAT  56 175
        tyrS 2281573 .. 2281588 +  -3.9   -3.6502   AAAACATGTCATGCG              GGCGT CAGCCC GCGCC               TTTGGATCACCGATC  53 204
         pgk 2285249 .. 2285278 +  -3.5  -4.11216   AGCGGTGACAGGCCT       TCGGTAGACGC AACCCGAC GCGTCAACAGA        TTTTCGGAGTCCCCC  61 75
         fda 2286202 .. 2286221 + -12.1   -4.1899   CCCTCGGACTTCGCA            GGCCCCG CCCCGC CGGGGCC             TTTTGCGTGCCATGG  86 49
   Dshi_2157 NONE
       pdhA1 NONE
       pdhB2 NONE
       pdhC1 2290706 .. 2290716 +  -2.4  -3.08046   CGGCCCCGATCAGAA                 CGCC ATC GCCG                 ATTTTCGGGTGACGA  42 237
   Dshi_2184 2312921 .. 2312977 +    -5  -2.83894   GGGTCAGATCCCCGG TGATCAGCGCCGTGTCCTC-GCCAGTG ACCT CGATGGCCGTGGACGTGAAGCTGACCA TGTCCTCGTCGTCAT  44 304
        rpsF NONE
        rpsR NONE
        rplI 2314833 .. 2314855 + -17.7  -4.77165   TTTGACGGATCACAA           GCCGCCCGC ACCTC GCGGGCGGC           TTTTCTTATGGCAAA 100 53
        cpdB 2316974 .. 2317006 + -15.6  -2.91264   GCGCCCCCCCGGAAA     CGACAAAGGCCGCCC CACC GGGCGGCCTTCG-CG      TATCTCCGTCGGGCG  79 41
        uvrB 2321496 .. 2321513 +  -6.9  -4.09739   GCGGGAACGTCAAGC             GGCGCAA AAAA TAGCGCC              TTTTCCGAACCTTGC  67 12
   Dshi_2194 2322491 .. 2322506 + -11.8  -3.15544   CCGGGTGCGACCCCT              GCCCCG GCCG CGGGGC               TTACTGCGCCTCGCG  70 279
   Dshi_2198 2326495 .. 2326538 + -12.9  -3.14132   GCGCGGGGATGCGGT GGTGCTGCGCCCGGCGCCG TGAGGC CGGGGCCGGGGGCCGGGCC TTGGTGGACCAAGCC  73 4
   Dshi_2199 2327475 .. 2327487 + -10.5  -3.62591   TGCGAAAGCCGAGCG                CGGGC TTG GCCCG                TTTCGCAGTTCTGGC  70 76
        nadD NONE
   Dshi_2204 2330772 .. 2330791 + -16.4   -4.7497   GCAGTAAGGGTTCCG            GGGGCGCC GAGC GGCGCCCC             TTTTTCGTGCGTCAG 100 34
        lysK NONE
   Dshi_2207 2333574 .. 2333599 + -13.2  -3.12351   GATGAAGGCAGGCGC         GGCCCACGGG GGCTGA CCCGGGGGCC          TTCGGTGTGCCGCCG  73 103
   Dshi_2209 2336300 .. 2336321 +  -2.1  -4.07568   GGGTAATCTGCCCGC           AATGCCGGA TCCG TCCGGCGCA            TTTTCCGACAGAGCA  57 76
   Dshi_2210 2338704 .. 2338726 +  -5.4  -2.64616   GGCCCGTCTGAGCCG           GGGTCCGGGC GAG GTCTGGGCCG           TGGTATCGGTCGCGC  43 30
   Dshi_2211 2339759 .. 2339771 +  -4.1  -3.30243   GGCGTCGGTGTCGCG                GATCG GAT TGATC                TTGTCAGGCATGGCT  47 506
   Dshi_2213 NONE
   Dshi_2214 2340887 .. 2340917 +  -6.1  -4.25104   GCCGATCGTGGCGTC       CAGCTTGGTCAAC CGCGT GCTGGCGAAGCTG       TTTTCCTCGCGGAAG  70 248
   Dshi_2216 2342097 .. 2342114 +  -6.3  -2.87132   AGTGAGGTCTTTTCA             TGGGA-CG CTC CGATCCCA             TCTGTAAAAGGAACA  50 36
   Dshi_2217 2342405 .. 2342436 +  -9.3  -2.87564   CTTGGGAAAGGCGCG      GCCCCC-GCGGCGC TCCGC GCGCCGCCGGGAGA      TATGTCGAGACGTAA  58 43
   Dshi_2219 2343922 .. 2343941 + -16.4  -4.23758   CCTGCAGCTTTTCGA            GGGCGCGG TCGA CCGCGCCC             TTTTCCATGTCCGCT 100 50
   Dshi_2220 2344418 .. 2344428 +  -6.8  -2.71364   GAAGCCGGCGCCTGA                 GCCT TGC AGGC                 TGCTTCGGCCCCTAC  49 26
   Dshi_2221 NONE
   Dshi_2222 2346110 .. 2346120 +  -8.2  -3.23393   CGCGAAATGGCTGCC                 GGGC TCG GCCC                 TGTTCTGAACTGACG  58 7
   Dshi_2223 NONE
   Dshi_2224 NONE
   Dshi_2225 NONE
   Dshi_2226 NONE
   Dshi_2227 2351323 .. 2351335 +  -4.1  -3.48276   CGGGATCGCCTGCCG                TTCTG ACG CAGGA                TTGTCTGGAAACCAC  51 20
   Dshi_2228 2352974 .. 2352989 +  -3.2  -3.64703   ACTTGATGTACTCGA              TCTGCG GCCC TGCGGA               TTTCGGTAGCACCCG  53 405
   Dshi_2234 2358724 .. 2358752 + -14.5   -4.4261   AGCCGAAATGAAAAA        CGCCGCCCCGC AGATCTC GCCGGGCGGCG        TTTTCGTGTTCGGAC 100 66
   Dshi_2248 2370959 .. 2370981 +  -6.8  -3.53343   TGCACCGCATAGAGC           CGCGCGGCGG ACT TCGCCTGGCG           TTTGGCGGCCAGCTT  58 458
   Dshi_2253 2374881 .. 2374900 +  -7.9  -4.53303   GACGCTTCCCGATAC            GCGTTGT GAAATA ACAACGC             TTTTGTCTCACGGTG  81 12
   Dshi_2254 2376197 .. 2376222 + -13.9   -4.8622   GAAGCATCCGAAAAA         GGCGCGCGCGG CATA TCGCGGGCGCC          TTTTTCCTTGCCGGA 100 58
   Dshi_2255 NONE
   Dshi_2267 NONE
   Dshi_2268 NONE
   Dshi_2269 2394659 .. 2394672 +  -4.5  -2.90496   CACCACCGAAAAGAC               GCGTT TCAC AGCGC                TGGTTTGCAAGACCA  44 454
   Dshi_2272 2395724 .. 2395745 +  -3.7  -3.14211   CGCGATTGATTACGA           GGGCGCAAAC CAT GTTTG-GCCA           TTACTGACGGAGCCT  47 64
   Dshi_2273 2397095 .. 2397107 + -10.5  -3.57144   TTTCCTGCCGGTCCC                GCGCC GGT GGCGC                TTTCCAAGTCGGGAC  70 69
        glpX 2398146 .. 2398167 +  -2.9  -3.87815   CCGACCTCCGCGACC           TGACGTGACC GAT GGTCCCG-CG           TTTCTCGGCGTCGAA  56 23
        recJ 2400087 .. 2400119 +    -7  -4.98531   TAGTTCAATCCCCTC     CCATGC-GGCCACTC GATC GAGTGGCGAGCATGA      TTTTTGGTTTCGCGA  86 205
   Dshi_2279 2406197 .. 2406215 +  -4.4  -3.14602   CAAGTGAGCCGTCAG             GGCGACCA ACA TGGGCGCA             TCTTCGTGGCGTCGC  47 484
   Dshi_2281 2409713 .. 2409741 +  -6.5  -3.01791   AGATCGCGAATGAGC        GGGCCTGCGCAAG AAT CGTGCGCGGGACA        TATTCCAGACAGCCT  51 256
   Dshi_2282 2410675 .. 2410718 +    -3  -3.66178   AAACCAACGCGTCGG CCTTCGTGGCCCCT-CGGTAG TGT TTCCCGGAGGGGTCACAACTG TTTCCCATTCGGAAA  51 40
        pamO 2412546 .. 2412577 + -11.4  -3.09202   GCCTGAAACCAACCA      ACCGTGCGCCAGGG TTGA CCGGGGCGCACGGC       TGTTCACATATCTAT  66 35
   Dshi_2284 2414157 .. 2414171 +    -7  -3.33696   CGCCATCCGAACGGG               GGCGCC GAG GACGCC               TTCGTTGACGCGCGA  54 389
   Dshi_2286 NONE
   Dshi_2287 NONE
   Dshi_2288 NONE
   Dshi_2289 NONE
   Dshi_2290 2420933 .. 2420949 +  -7.2  -3.29511   TCGCCCTGTTCGGTC              TGCGGC TGCGC GCCGCG              TTCTGACAGAATGGC  58 3
   Dshi_2291 2421960 .. 2421972 +  -6.2  -3.40403   CACCAGCGCCATCGC                CGCC GGATA GGCG                TTCTGATAGGCGAAA  55 358
   Dshi_2306 NONE
   Dshi_2307 NONE
   Dshi_2308 2437181 .. 2437195 +  -5.7  -4.06384   TCGAATGAACCGTTA               CCGAT AAATG ATCGG               TTTCTGCTCTTCGAC  65 333
   Dshi_2309 NONE
   Dshi_2310 2439611 .. 2439635 +  -3.4  -2.64099   GCCGATCGAAGAACG          GCAGATGCGC AATCC GCGCGTCCAC          GTTATGCTCCCGAAA  39 77
        putA 2443595 .. 2443620 +  -5.3  -2.52543   GTGTCGAGTCTCGCA         CTGCGCTCGCG ATTC CGTGGGTGGAG          TGCCTTACAGCAGGT  43 208
   Dshi_2312 2444738 .. 2444756 +    -3  -4.91459   GAGCAGCAGATTGAC             GCGCCG GTTCTGG CGGCCC             TTTTTCTCGATCTTG  75 371
   Dshi_2324 2456089 .. 2456117 +  -3.2  -3.35696   GCTGAGACCCGCCCC       GG-GGGTGCAAACG CGT TGTT-GCACCTGCC       TTGCGTTCTTTCTAC  46 36
   Dshi_2325 NONE
   Dshi_2326 2457746 .. 2457759 +  -5.3  -4.17089   AGGAAATTGGCAAAA               TCCTT GCTC AAGGA                TTTTGCGCCTTTGCA  65 72
   Dshi_2327 NONE
   Dshi_2328 NONE
   Dshi_2329 NONE
   Dshi_2330 NONE
   Dshi_2331 NONE
   Dshi_2332 2462849 .. 2462860 +  -5.8  -2.66316   GCGCCACCGCTGCGG                GGGT CATC ACCC                 TGATCTGATACCGCC  46 6
   Dshi_2333 2463519 .. 2463557 +  -8.7  -2.78816   TGCCCTGCGCCAATT   GGCCCGGGCACGCGG CACCATTCC CCGATTGCCCGGACC   TGTCCTGAGCGGTAA  54 51
        fumC 2465051 .. 2465065 +  -3.4  -2.80935   ACCGCATCGCCCACC               GGGCTG ACA CGTCCC               TCTAATGCCTGGCAT  40 69
   Dshi_2335 2465605 .. 2465623 +  -7.4  -4.63218   CCCGAGATCCCCGGA             GACATGGA TGC TCCAGGTC             TTTTCTTCGAAAACA  83 96
   Dshi_2336 2465811 .. 2465824 +  -5.3   -4.0896   TGGTCTGACGCAAAA               TCCTT GAGC AAGGA                TTTTGCCAAGAGTTT  63 33
   Dshi_2339 2468770 .. 2468787 +  -3.3  -4.15006   TGAGCCGATGAAAAA             GG-GGCCC CGA GGGACGCC             TTTTCCGATCGATAT  61 38
   Dshi_2344 NONE
   Dshi_2345 2479331 .. 2479348 + -11.3  -3.53091   AAACACGCCACAAAA             CCTTCCC CGCG GGGAAGG              TTTCAGAGGCCAGAT  71 128
   Dshi_2347 NONE
   Dshi_2348 2482433 .. 2482445 +  -9.1  -3.29144   GGCTTCATGTAACCC                GTCCG CCT CGGAC                TTGTGGCACGCATAC  63 29
   Dshi_2349 2483220 .. 2483260 +  -6.1  -3.30124   GCAAGAGCGCCATCT  CACCATCGAGACCGG CCAGGGCCGCC CCGATCTCGGCGGTG  TTGTGGCCGGTCACG  53 379
   Dshi_2352 NONE
   Dshi_2353 2487670 .. 2487683 +  -4.5  -4.20516   ATCCCCGGAGCCCGC               GATGG ACGC CCGTC                TTTATTACCTGACCC  63 113
   Dshi_2354 2489321 .. 2489331 +  -8.2  -3.14564   CCTTGGCCCAGCCCG                 CGCC CTT GGCG                 TTGCTCACCGCATGC  56 524
   Dshi_2357 2492589 .. 2492615 +  -8.9  -3.28712   TAGGTTTGGACGGGG        C-GGAAGGATTT TCGA AAATCCTTCCAG         TTCTCCGCGGCGCAG  60 144
   Dshi_2358 2493563 .. 2493621 +  -2.1  -3.36823   CAGCATCGAGTCGCC CCCAAGGC-CGCGCAACTCCTGCGTGCG ACGG CGGACGCAAGAGAAGCCCGCGCATAAGG TTCCATTTTCAGACC  45 263
   Dshi_2359 2495118 .. 2495137 + -12.8  -5.05116   TGAAAAACCTCGATC            CCGGGCGT TCCT GCGCCCGG             TTTTCTTGTTTATGG 100 52
       pyrC2 NONE
        pyrE 2505609 .. 2505619 +  -4.6  -3.55444   TTACTAACAATTGCC                 CTGC AAA GCGG                 TTTGGGCCATAAAAA  55 211
        dnaB 2507389 .. 2507404 +  -3.2  -2.75844   GATCCGCCCCCTGCC              GCGC CCGCTGAT GCGC               CTTTAAACTCGGCAG  40 240
   Dshi_2374 2508700 .. 2508740 +  -2.4  -3.60627   GCGCGCGCGCCGCGA ACGACCGCGCGCCTGCGAT CACA ATCGCGCG-GCGGGGTGGA  TTTAGGCTCCCCTCA  49 40
   Dshi_2375 2509711 .. 2509722 +  -2.2  -3.34398   AGGCACTGTCGATGA                TCGT GTCG GCGA                 TGTTTCCCACCGACC  44 148
         alr NONE
   Dshi_2379 NONE
   Dshi_2380 2515424 .. 2515444 +  -5.3  -2.73124   CCGCTCGCAAGGGGG            CGTCCCTTG CAG CAGGCGGCG            GTTTCGGGCATCCCC  44 332
        lipB 2516165 .. 2516176 +  -2.2  -3.19602   GTGTCCCGTAAAATC                CCTT GCAG GAGG                 TCTTCATGTCCCGCA  43 45
   Dshi_2382 2516852 .. 2516862 +  -2.4   -3.8613   TGATGCCTTAACGCC                 GCGC CGC GCCC                 TTCTTCATCTTTGCG  54 156
        ctaD 2518800 .. 2518825 +  -2.5  -3.07816   GTGGGACAAGCAGCC         GTCGCACTGAGG GAA CCCCA-TGCCAC         TTGAGTGGATCACCA  41 16
   Dshi_2384 2519482 .. 2519497 + -10.4  -3.55071   GCAAAGCGCGTTCAA              GCCCGT TCGA ACGGGC               TTTGGGGCGCTCTGC  70 167
        carA 2521956 .. 2521991 +  -6.8  -3.37959   GCTGCGCGCCGTGCA    GTTACGGCGGGCTAACG CGG CGCAA-CCCGCCTTAAC    TTGATGTTAACCTTG  55 11
   Dshi_2388 2523952 .. 2523976 + -12.2  -3.31461   GTACCCGAGCCGCCC         GC-CTGAGCCG CCAC CGGCTCAGAGC          TTCTCCGCGTCGCTC  72 20
   Dshi_2390 2525409 .. 2525436 +    -4  -2.80443   TTTTGCTGCACTGCG        GCAACGCGCC TCCTGTCC GGCGCATGGC         TATGCTGCCATATAC  42 83
   Dshi_2391 NONE
   Dshi_2392 2527043 .. 2527058 + -11.8  -3.14132   GCCGAGCCGGGCCAA              GGGGGC GCGC GCCCCC               TTGCTGGCGCGCCGC  70 67
        ilvC 2530697 .. 2530716 + -16.4    -5.252   CTCGAAAACGCGAAA            GCCCCGGC CGGT GCCGGGGC             TTTTTTGTGCCCATG 100 47
   Dshi_2405 2543517 .. 2543544 +  -8.5  -3.05384   GGCCGACAGGATCCA        TTTCGCGGTGTC GTTGA GGC-CCGCGAAA        TTGCCTGCGGGCCCG  55 119
   Dshi_2410 2548142 .. 2548165 +  -3.8  -2.53876   TGGAAACCCGGCATG          CGGCCC-CCAT CTT ATGCCGGGCTG          TCACTTGGGATGCGA  41 146
   Dshi_2411 2549321 .. 2549359 +  -8.3  -4.42238   TTGGCTGCGCGGGCC  TCCGGGCGCAAAATCCTT GAGG AAGGATTTTGC-CAAGGA   TTTTACTTAAAATCC  84 49
   Dshi_2425 2567400 .. 2567424 + -16.4  -3.36273   TCACAACATCCAGGG          CCCCGCCGGC ATCAC GTCGGCGGGG          TTCGTCTTGCGCGGG  88 54
   Dshi_2427 2569618 .. 2569640 +  -5.6  -3.57561   TATCCTCGACCTCGG          GCACGTCCT CCACAT AGG-CGTGC           TTTCCCCGCTTGCGC  54 282
   Dshi_2436 NONE
        rhaA 2580969 .. 2581018 +  -7.6  -2.78384   AGACGCCCGGCACCG CCGCCCGGCGAGGCGCCCGGGCT ATCAG AGCCCGTA-GACCCGGTGGGCGG TGTCGTGGAACAGCG  52 109
   Dshi_2468 2620650 .. 2620663 +  -8.1  -3.14132   CGCCCACCACCACGA               GCACG ATCT CGTGC                TTGGTGGCCACGGCG  54 250
   Dshi_2478 2631613 .. 2631637 +    -7  -3.14132   CGCCGCCACGGCCGA          CCGCACCGCG TTGAT CGCGATGCCG          TTGCTGCGCCGCACC  52 266
   Dshi_2480 NONE
   Dshi_2481 2633490 .. 2633528 +  -9.5   -3.5764   CCCTCTGATCCCGCC  ACG-GCGCCCAAGCCCGT TCGA ACGGGCTTGAGCACGCGA   TTTGCAAATCGCGTT  68 33
   Dshi_2482 2634130 .. 2634150 +  -5.4  -3.06183   CCCGGCCTTGTCGAA            GGCGAC CTCCAGCTT GTCGCC            TTCGATCCCCGTCAC  47 140
       lldD1 NONE
   Dshi_2485 2641222 .. 2641252 + -11.1   -3.0976   TGGAGTGAACCGCTC      G-CCCGGGCG-GCGC GAT GCGGGCGCCCGGGGC      TGTTAACCTATTCAA  66 33
   Dshi_2489 NONE
       citE1 NONE
       sucC2 NONE
       sucD2 NONE
   Dshi_2493 NONE
   Dshi_2494 2651667 .. 2651684 +  -2.6  -4.56597   CACAAAGGGCGATGC             GTGGCA TCGCCC TGCCCC              TTTTTCAACACCAGC  68 113
   Dshi_2497 NONE
   Dshi_2498 2655578 .. 2655591 +  -2.4  -2.70932   GCCCAAGCCCCGCAG               CGAT GCCGCA ATCG                TACTTGGCCGCCCCG  38 342
   Dshi_2501 NONE
   Dshi_2502 2661291 .. 2661301 +  -2.4  -4.07687   CGGCCGTTGTCTGGG                 CGCC GCT GGCA                 TTTTCGAAGACAACT  57 53
   Dshi_2504 2670238 .. 2670276 +  -3.7  -4.09685   CCCAAGTCATGACCC  CCGAGTT-GTGGCCGGCA TTCC TGCCGGCCACCGGGACGC   TTTTGGAAGGTGGAC  61 29
   Dshi_2507 NONE
   Dshi_2508 2673771 .. 2673819 +  -2.9  -3.68936   AGCCCGCTTTCGGCC GCCCCGGCGGCGCACTTG-GAG CTTCTC CTCGCGATAGAGCCGCCTGAGC TTCTTCAGGTTCATC  53 481
        dusA 2677089 .. 2677103 +  -2.7  -3.18383   CTGGAACGTAGCGGT               GTCGG TAGTC CCGTC               TTCGTAGGTCAGCGT  44 80
   Dshi_2514 2679022 .. 2679035 +  -8.1  -3.33737   GGGACACCAGGGTGG               GGTCG GTTT CGACC                TTGTGGCGGTTGATG  56 507
   Dshi_2516 2680988 .. 2681000 +  -3.3  -3.57971   TTGTGCGCCTTCTCT                TCGCC GAC GGTGG                TTTCCCACTGGATGT  49 333
   Dshi_2523 NONE
   Dshi_2539 NONE
   Dshi_2540 2697657 .. 2697674 +  -7.7  -3.53224   TGTAGCACCGCTTCA             GGTGTCT CTGG GGACACC              TTTGCGCAGCACATC  60 183
   Dshi_2542 2699426 .. 2699436 +  -2.4  -3.05596   CGGACAACTCAAGAA                 CACG GTG CGCG                 TTGCATGACGCACTG  41 7
   Dshi_2543 2700517 .. 2700545 +  -4.4  -3.37879   TCGCTGAAATCGGCG        CCGCGGCAGTCA ACTGA TGACGCCCGCAG        TTGCTTCCGATTACT  48 9
   Dshi_2544 NONE
   Dshi_2545 NONE
   Dshi_2546 2703668 .. 2703697 +  -4.9  -4.77567   CGGCGGGCCACTGCA       GGATC-GCGACGGC AAA GCTGTCGCCGAGGC       TTTTCTTATCAAGAT  79 443
   Dshi_2566 2733618 .. 2733654 + -17.3  -4.15565   AGTGAGTGGCTTGGA    TCGGCACGCTCTGTCCC CTT GGGGCAGAGCGTGTTGC    TTTTGGGATGGTAGC 100 275
   Dshi_2567 NONE
   Dshi_2568 2737068 .. 2737081 +  -9.5  -3.29511   CGGCCCATATCGCCT               CCGCC GGCG GGCGG                TTCTCCAGAAGTCCG  61 384
   Dshi_2571 NONE
   Dshi_2572 2739923 .. 2739935 +  -4.7  -3.60296   AAACAATTCTCACGG                GGGCG CCG CGCCG                TTTCACATGGAAGTC  55 40
   Dshi_2573 2740630 .. 2740653 + -11.7  -5.75342   CGTTCCGTTACTTTA          CGCCCG-GCC CTCTC GGCACGGGCG          TTTTTTTTGGCGAAA 100 185
   Dshi_2574 2741300 .. 2741326 +  -6.4  -4.68593   ATCCTTAAGCGGCTT         GGAAGCCGCTTG GCC CTAGCGGCTGGC         TTTTTCGCTGATCCC  81 99
   Dshi_2577 2743781 .. 2743793 +  -3.3  -3.53012   AAAAAACGCGCCAGA                GAACG GCC CGCTC                TTTCCAAAACCCCAC  49 200
   Dshi_2579 2745147 .. 2745162 + -10.4  -3.14132   CGCTGAGCGGCCCAA              GCCCGT TCGA ACGGGC               TTGATCCCCGCACAG  64 35
   Dshi_2582 2749829 .. 2749856 +  -3.4  -2.64803   GAATCGCTTGACGCC        CGCGTG-CATCCA TCC TAGATGACACGCC        TGAGTTTCCGGGTGC  39 39
        rpmB 2750249 .. 2750274 +   -14   -4.8048   GCGATCCTGCAAAGC         GCCCCGC-CGG CCCGT CCGCGCGGGGC         TTTTTCGTGTCCGCG 100 48
   Dshi_2584 2750938 .. 2750953 +  -3.2  -3.37283   CAGAACTGTTCAGAC              CAGGAG AACC CTCATG               TCTTTCAAAGCTTTC  46 56
   Dshi_2585 2751569 .. 2751592 +  -8.1  -4.59773   GAAGAACACGGAAAA          GCCGTGCGCC CGCCA GGC-CGCGGC          TTTTTCCACATCCGG  81 131
   Dshi_2587 NONE
   Dshi_2588 NONE
   Dshi_2589 2756125 .. 2756137 +  -7.7  -3.14051   TTTCGCTGCGGCTAT                TGCTG ACG CAGCA                TCTTGGTGCAAGTGC  56 101
   Dshi_2590 2757220 .. 2757251 +  -5.1  -4.59853   GTGATGTCCTGAGGT      GGGCGTGCCAGACG CCATC CGCCTG-CATGTCC      TTTTTCAGAAGTTAG  77 341
   Dshi_2592 NONE
   Dshi_2593 NONE
   Dshi_2594 NONE
   Dshi_2595 NONE
   Dshi_2596 NONE
   Dshi_2597 2762562 .. 2762572 +  -2.4  -2.76249   CCCTTGGTGCATTGG                 AGCG TGT CGCA                 TGATTGGCGTCTTTG  39 12
   Dshi_2598 NONE
   Dshi_2599 NONE
   Dshi_2600 NONE
   Dshi_2601 NONE
   Dshi_2602 2767633 .. 2767664 + -10.7   -2.9462   TCAACTGACAAACAA      GCCGGCGGGCCGC AACAAA GTGGCCAGCCGGA       TCATTTCGCTCGATA  64 64
   Dshi_2603 2769934 .. 2769952 +  -4.4  -4.20696   GGCCGGGGGCCAGAC             CGGCTGCG GGC CGTGGGCG             TTTTCGCCTTCCTCG  63 128
   Dshi_2611 2775499 .. 2775518 +  -4.8  -2.71712   GGCGCGCGCAGGCGG            GGCACGGG TCAT CCGGCGCC             ATTTCGCGCGGGGCG  43 519
   Dshi_2613 2776803 .. 2776819 +  -2.2  -3.87869   ATAGCTTGAAACGGG              GCGG TTTTCAATT CCGC              TTTGTCAGGGCTTCA  54 422
   Dshi_2616 2778487 .. 2778499 +  -2.6   -3.6682   AGATGACAGGGGACG                TGGC GGATG GCCG                TTTAGATAGCTGCCC  49 107
        rimO 2780947 .. 2780995 +  -9.4  -3.02144   GACCTTTGGGGGACG CGCGTCTGATCCCGACCGTGCCG CGCG CGGCGCTGGCGGGATGTG-CGTG TCTTGGGAACACTGA  60 17
        cutA 2781734 .. 2781754 +  -3.9  -3.53012   AAGCCACGCGCGGAT            CCTAGGC GACATCG GCCTCGG            TTTCCACAGCCAAAG  51 394
   Dshi_2624 NONE
   Dshi_2625 NONE
   Dshi_2626 NONE
   Dshi_2627 NONE
   Dshi_2628 2787183 .. 2787193 +  -2.4  -4.17048   AGATATGGTGAATGC                 CGCC CGA GGGG                 TTCTTTTCCAGAAAC  62 523
   Dshi_2631 2788263 .. 2788276 +  -3.7  -4.58283   CGCAGGGGCCTGATC               GGCAG CCTG CCGCC                TTTTTGCCACAGTTC  72 44
   Dshi_2632 2788645 .. 2788655 +  -2.4  -3.72027   CGAAGGCCCCCGACC                 CGGG CCG CCCC                 TTATTCCTGCGGGAT  52 65
   Dshi_2635 2791907 .. 2791924 +  -2.6   -3.6106   CGAACACGGCGACAT             GCCAGA AACAGA TCGGGC              TTTGCGCCTGTTCGC  48 190
        carB 2797895 .. 2797925 + -12.5  -2.62184   ACACTCGCTGCACTG       GCGGGATGCGGGG GCGTG CCCCTCATCCCGA       TCATCTGACCCCGCG  67 88
         tdk 2799826 .. 2799836 +  -2.4  -3.53012   GAGTTTGGCCTGAGC                 CGCG AGA CTCG                 TTTCCAGGAACGCCC  48 400
   Dshi_2647 2804431 .. 2804441 +  -8.2  -3.21747   TGGCCCCTTGCGCCA                 CGCC CAT GGCG                 TTGGTCATCAACTGG  58 210
         lgt NONE
   Dshi_2650 NONE
   Dshi_2651 2807509 .. 2807528 +  -4.2  -3.62597   CAAGGCTGACCACAA            TTCGCGAT CACG AGCGCGGA             TTGTTCCCAACTGCC  53 200
   Dshi_2652 NONE
        trxB 2810295 .. 2810308 +  -9.5  -3.53012   CTCGCCCGTGGGCCG               CGGCG TCGC CGCCG                TTTCCACCGGCAGGA  64 99
   Dshi_2656 2813704 .. 2813725 + -15.9  -3.50853   CGGCCCACAGGAAAA           CAGCCTCCC CCCG GGGAGGCTG            TTGTCATTGGCACAC  85 77
   Dshi_2664 NONE
   Dshi_2665 NONE
   Dshi_2666 NONE
   Dshi_2667 2824726 .. 2824761 + -11.6  -2.57683   CAAGCTGTGGGCGTG    CCTGTCGCGGCGTCCG TCCC CGGCCCCCGCGCCCGG     ATTGTCAGACAATGT  65 365
   Dshi_2668 NONE
   Dshi_2669 2826709 .. 2826724 +  -2.5  -3.53012   CGAGCCCCGCGATGA              TCCGC AGCAGG GTGGA               TTTGCCGACCCCGGA  48 483
   Dshi_2672 2828511 .. 2828530 + -12.8  -4.28254   GTCCGATCTCGCACG            CGGCGGCC CCTG GGTCGCCG             TTTTGCGTGTTAGGG  95 53
        exaA 2830575 .. 2830597 + -17.7  -4.27316   CTGCAACTCACGCGA           CGCGCGCCC CATCC GGGCGCGCG           TTTTGCGTTCGACCG 100 53
   Dshi_2674 NONE
   Dshi_2675 NONE
   Dshi_2676 2835059 .. 2835078 +  -9.2  -2.70932   ACATCGCGTCGAACG            CGGCCTTG TAGT CGGGGCCG             TAATTGCCCGGCGCC  55 237
   Dshi_2678 NONE
   Dshi_2679 2838878 .. 2838908 +   -16  -2.61264   GCCGCGCTGACGCGC       GTCGCCGGGGCGGG GGC TCCGCCCCGCCGCC       ATTGTCGCTCGGACC  80 106
         mro 2844987 .. 2845004 +    -7  -2.78384   CCCCCGGATCGCTCA             TCCCGA AGCGGA TCGGGA              TCTCGTCGAGAAACA  48 184
   Dshi_2686 2847454 .. 2847486 +    -6  -2.60992   GCGCGGCCGCGACAT      GGGCCCACGCGCGC ACGGA GCGCGCGGCACCCC      CTATTTCCGACAATT  46 101
   Dshi_2687 2848096 .. 2848124 + -15.3  -3.01924   CACCTCCTGACGCAG       GCGCGGGC-CGG CCGCCC CCGCGCCCGCGC        TCTTGCGGGCCCATG  81 31
        appC NONE
        cydB 2851257 .. 2851279 +  -6.8  -3.57144   CAGCTTCACGAAGCT           GCCCGCGCCG CTC TGGCGCAGGA           TTTGCCCGTCGAGCA  58 502
   Dshi_2691 2852548 .. 2852563 +    -4  -2.78371   ACCGGGCCTCGGCAA              TGG-ACG GCC CGTTCCA              GTTGTTCGCGCTGTC  41 304
   Dshi_2694 2854322 .. 2854335 +  -3.7  -3.55815   GGATCGCCCGAAGAC               CCGGC TCCG GCAGG                TTTCAGCCCATATTT  53 323
   Dshi_2695 NONE
   Dshi_2696 2857770 .. 2857795 +  -9.7  -2.57132   CCGACGCAGGCCCGA         CGCCGATCCGAC ACG GTCGGA-CGGCC         ATTCTCGGGACACCC  56 116
   Dshi_2697 NONE
   Dshi_2698 NONE
   Dshi_2699 2860714 .. 2860730 +  -8.7  -3.52874   CGCCACAGACCCTTC              CATGCGC TCC GCGTATG              TCTTCTTCTGTGCAA  63 224
        dhlB NONE
   Dshi_2701 2862489 .. 2862517 +  -3.6  -2.72144   TGCGCGCCTTTCTTG        CCGCCGTGCCCC CATGA GCGGCGCCCCGG        ATTTCGACCGGATCA  40 9
   Dshi_2702 2863796 .. 2863823 +  -5.5  -3.01712   CAGGGTGCGGGCCAC        GGCATCGGC GAAATCATGG GCCGAGGCC         TCTTCGCGCAGGGAA  47 327
        hemE 2866226 .. 2866276 + -13.6  -2.62171   GACACCGTGCGCAGC GCCTGAG-CG-GGGGCAAGAATTTT ACTT AAAATTCTTGCCCCGCGGCGC-GGC ATCTTTCGGGCTCTG  71 20
   Dshi_2706 NONE
        metG NONE
   Dshi_2708 2871346 .. 2871373 + -12.6  -2.86164   ACCGGCAGGTCGCAT        CCCGCGCAGTGA TAGA TCCCGGCGCGGG         TCTCGTCGTTCAGGG  66 278
   Dshi_2710 NONE
       cobS2 2874504 .. 2874528 +  -3.5  -3.40403   GTGCAGCTCCGGCGT         GACCG-GCAG ATTGCC CTGCGCGGCC          TTGTCCTGCGCGCGG  49 506
   Dshi_2715 2878011 .. 2878044 +  -9.4   -3.1855   CGGGTCAGGCCCCGG     GCCCCTAGCGCCCC TTGCGC GGCGCGCTTGCGGC      TTCAGTGTTCCGAAA  61 73
   Dshi_2717 NONE
   Dshi_2718 NONE
       cobT1 2881412 .. 2881440 +  -5.4  -3.10597   CCGCGGCCGGATGTG       CTATCCTG-CTCTC ATT GAGAGACAGGG-AG       ATTTTCCATGACCAA  47 47
   Dshi_2720 2882589 .. 2882604 + -10.4  -3.53343   GAGCAACGGGCTCAA              GGCGCT TCGC AGCGCC               TTTAGAGGCGCCCTT  68 39
   Dshi_2721 NONE
   Dshi_2722 2885081 .. 2885100 +    -7  -4.07568   CGGCACGAGGGACCG            CGTGCGCC GACA GGCGCGCC             TTTTGGCAACACACG  67 173
   Dshi_2726 2889188 .. 2889246 + -18.7  -2.73364   TTCTCAGGCGCTCCG CCTGCGCAGCGACC-GCGCGCGGCAGGGC CGC GCCGAGCCGCGCGCTGGCCGCA-CGCAGA TCCTTGCGCTCGGCC  87 483
        purD NONE
   Dshi_2729 2892877 .. 2892893 +  -4.4  -3.14132   CGCCCGAGATGAAAT             CC-TCGC CGAT GCGATGG              TTGGTCAGACCCGGC  47 247
   Dshi_2732 2894329 .. 2894351 + -17.7  -3.00498   CGACCCATAGAAAAA           CGCCCCCGG CAGGA CCGGGGGCG           TCTGTGTCACCTGTC  90 90
   Dshi_2740 2903549 .. 2903567 + -10.2  -2.71712   ACCGTCCTCAGGTCA             GGCCGGTC AGC GACCGTCC             GTTTCCGGCGGCGCA  60 62
        secG 2905780 .. 2905808 + -10.2  -3.53444   ATCCCGTGGAGACAC        GGGTTCGGGGGT GCGAA ACCCCCGCGTCC        TTTCCAGCAAAATCA  68 125
        pyrG 2907528 .. 2907550 +  -5.4  -3.01791   TGATCCCGCCCGGAC           CTTGGGGGGC GCT GCCCCCGGAA           TATTGCAGGAACGAT  47 38
   Dshi_2745 2908572 .. 2908585 +  -9.5  -2.77899   ACCGGCCGGGCCCCT               CGGCG GCCG CGCCG                TAATTCATCGCAGCC  55 161
   Dshi_2747 2909555 .. 2909597 +  -4.7  -2.87344   ACAGCCCCTTGCCCT TGCGGC-CCGAGGCCGCC TTCACCTC GGCGGTCCAGGCGCCCCA TGTCTCCGGCCCGTA  44 140
   Dshi_2750 2913240 .. 2913250 +  -6.8  -4.18197   ATTTCGGTCCCCCCT                 GCTG GCG CAGC                 TTTTCCGTGGCCCGT  69 176
   Dshi_2758 NONE
   Dshi_2759 2921502 .. 2921518 +  -7.9  -4.48072   AAAGGCGAAATCCAC              CTGTGCG GCC CGCGCGG              TTTTGTAGTCCGTCT  79 141
   Dshi_2762 2924841 .. 2924860 + -16.4  -3.63627   GCAGAGAAAGACAAA            GGCCCGGG ACTT CCCGGGCC             TTTCGCATCTCAGAA  91 50
        guaD 2934619 .. 2934661 +  -8.8  -4.57569   TTGCGCCGCGCTGCG CGCGTCGCCGGGGCGGGGGC GCT GCCCCCGCACCCCCGGAGTA TTTTTACACAAATGA  86 79
   Dshi_2776 2939295 .. 2939310 +  -3.2  -3.51924   CAGCGCGTCGCGCAC              CGG-GTC GTG GGCACCG              TTATGTCCGTAGAGC  49 253
   Dshi_2778 2940581 .. 2940600 +  -8.5  -4.40561   AATATTTAGCCCAAC            CGGGCCG CGCCAT CGGTCCG             TTCTTTTTCAAGGAG  84 164
   Dshi_2779 2941371 .. 2941388 + -14.1   -4.8622   GGCAGACACAGGAAA             GCCGGCC CTCG GGCCGGC              TTTTTCGTTGCGCAC 100 52
   Dshi_2788 2948046 .. 2948087 +  -6.4  -5.00616   GGTGGGGCCGGAAAG GTTAACGGC-CGCCGGTCC GGAAG GGTCCGGCGCGCCGACAAG TTTTTTCGCAAAACC  86 41
   Dshi_2790 2949753 .. 2949770 + -11.3  -3.54935   GATTGGGGCCCAAAA             CCTTCCC CGCG GGGAAGG              TTTCACAGCGATTTC  73 74
   Dshi_2791 NONE
   Dshi_2792 NONE
   Dshi_2793 NONE
   Dshi_2794 NONE
   Dshi_2795 2955429 .. 2955448 +  -3.5  -4.77165   CTGGATCTTGCGGGT            GCCGCCGG TCTTC TCGG-GGC            TTTTCTTGTCCACGC  77 62
   Dshi_2797 NONE
         dtd 2957429 .. 2957444 + -10.4  -3.14132   AAATCGCGTGACCAA              GCCCGT TCGA ACGGGC               TTGGTCGCCGCGGCG  64 111
   Dshi_2810 NONE
   Dshi_2811 NONE
   Dshi_2812 NONE
   Dshi_2813 2970065 .. 2970091 +  -3.5  -3.72576   ACTCGTCGCCGCCCA         CCCGGAACGAG AAATC CTCCGACCGGG         TTTCCTCGCGCAGGA  54 340
   Dshi_2820 2977926 .. 2977944 +  -3.9   -4.4009   AAGTCAATCTGTCAG            GCAGCTTT CTTG AAAGC-GC             TTTTGTAAGGTGGGG  69 185
   Dshi_2821 NONE
   Dshi_2822 2979502 .. 2979518 +  -5.1  -3.28712   TGTCGTAGAGCCGTG              CGAGCAT GGA ATACTCG              TTCTGGACCGACACC  51 440
   Dshi_2824 NONE
   Dshi_2825 NONE
   Dshi_2826 2983111 .. 2983124 +  -4.5  -3.14284   GTGACAGCCTGGGCG               CATGC ACCG GCGTG                GTTTCTTCCTCGGGG  47 62
   Dshi_2827 NONE
   Dshi_2828 2985547 .. 2985600 +  -9.6  -3.30124   CGGGTCTCGCCGGCC GCGGG-CA-CCCGGTTGATGGCGC CGATGGGC GCGCCGTCCACCAGGATGATCCGC TTGTCGCCCCTGGCC  61 290
   Dshi_2832 NONE
        glnD NONE
   Dshi_2834 2993442 .. 2993455 +  -3.7  -3.40403   CGTCGTAGCGAGGAG               CGCGC GCAA GCGCA                TTATCGTAGCGAGGA  51 108
        trpS 2995438 .. 2995449 +  -4.4  -4.07868   ACCCGCCAGGCCCCT                GACA TCCA TGTC                 TTTATCTCAGTCTGC  61 107
   Dshi_2837 NONE
   Dshi_2838 2997254 .. 2997272 +  -2.3  -3.63895   GCTGGAGGCGGTGTG             CTGACCT TTCAC GGGACAG             TTTAGAATCGTTCCA  49 22
   Dshi_2839 NONE
   Dshi_2840 NONE
   Dshi_2841 2999067 .. 2999077 +  -2.4  -3.34013   TGTTGACCCTGCCGG                 GACG CGC CGCC                 TTACTTGGCGGGATC  45 105
   Dshi_2842 NONE
       rbsA2 NONE
   Dshi_2844 NONE
   Dshi_2845 NONE
   Dshi_2846 NONE
   Dshi_2847 NONE
   Dshi_2848 3006282 .. 3006308 +  -7.9  -4.19704   CGCGGCTGACATCGG         CCCTTGGCCCC CACGC GGGGCCAAGAA         TTTTAGATAAAATTC  72 32
        mutB 3015569 .. 3015582 +  -5.2  -3.53761   GCGGAATAGGCCACC               CGCC GGACAA GGCG                TTTCGAAACGCCTTG  53 32
   Dshi_2857 3016813 .. 3016841 +  -8.2  -4.07568   GTCCGACACGGGGCC       GACGCCGATCCGAC GGG GTCGGG-CGG-GTC       TTTTCGCCGGGGCCG  73 90
        deoD 3017592 .. 3017608 +  -2.1  -2.52623   CGCTGGAGGCGGCCT              TCGCATG ATC CGCGCGG              CTCTTATCGCGGCGC  37 18
   Dshi_2859 3018268 .. 3018284 + -15.1  -3.75153   CCCGGAACGCGAAAA              CGGGGCC ATT GGCCCCG              TTTCCCTTACACGCG  90 254
   Dshi_2868 NONE
   Dshi_2869 3025966 .. 3025999 + -13.1  -3.28712   CCTGTGGGCGGCGCG     GTGCCGCCGGG-GC CGAGAAA GCGCCCGGCGGCCC     TTGTGCCGGGGCCCG  74 43
   Dshi_2870 3026234 .. 3026264 + -10.3  -3.05816   CGCTGGACTGACCCT      GG-ATCGGCCCCGG ACGC CCGGGGCCGCCGCC       TTCACTGGGGCATGA  62 30
   Dshi_2875 3029661 .. 3029688 +  -4.7  -4.19276   AGCCGGCTTGCGCAC        GCCAGCGGTCC TGTTCC GGGCCGCTGAA         TTTTGCCGATTTTGC  65 89
         mdh 3030950 .. 3030968 + -13.8  -3.64703   AAATGCCGGAAACAA             GGGGGGCT ACG GGCCCCCC             TTTGCATGCGCCAAG  81 49
   Dshi_2877 3032065 .. 3032081 +  -2.2  -3.21595   CTGACGCAGCTTGCA              TTCCTC CCCCT GCGGAA              TTCGTGATCACAGTT  43 83
        sucC 3033407 .. 3033426 +    -7  -3.34517   CGTCAAGGGCTGACG            CCAGCGGT CATG GCCGCGGG             TCTTTCGGGGCCCGT  55 28
   Dshi_2879 NONE
   Dshi_2880 3034818 .. 3034835 +  -4.1  -2.53263   GCTCATGGCCCTCGG             GTTGACGG GTC CCG-CGAC             TGCATTGACCATGCA  41 63
   Dshi_2881 NONE
       sucD1 3036343 .. 3036380 + -10.6  -3.53012   TGCGCCCGACATACC  GCACACG-GCACGTCCCC TTCG GGGGGCGTGCGCGA-TGC   TTTCAAACGGGACGG  68 51
        sucA NONE
        sucB 3040972 .. 3040994 + -19.2  -3.75378   GATTTGTAACCCGTA           GAGCGGGGCA TCA TGCCCCGCTC           TTGTCTTCTGGGGGT 100 32
   Dshi_2885 NONE
         lpd 3043269 .. 3043285 +  -2.1  -3.33696   CCGTGGCGGGACCCT              TCGCGCC CAA GCCCCGA              TTGCTTGACCCCGCC  44 181
   Dshi_2888 3045646 .. 3045660 +  -2.7  -3.31144   GCATGGCCGATCATC               AGCGG ATCGC CCGCC               TTGTCCCCGTGGGAG  46 137
   Dshi_2902 3059536 .. 3059586 + -13.9  -2.62983   CCCCGTCCGGGCCGA TCACCGTCACCTCCCGCTCCCCG TCGGT CAGGGCGCGGCGGGTGATGGTCA TGGTCTGGCCCTCGG  69 472
   Dshi_2907 3066821 .. 3066837 + -15.1  -2.72344   CGGCGGCGACCTTGG              CGGGCCG CGT CGGCCCG              TCCTTGAGACTGACC  72 325
   Dshi_2913 3072926 .. 3072939 +  -5.3  -4.25104   AGGGTCTTGGTAAAA               TCCTT CGTC AAGGA                TTTTACTCGCCCAGG  68 64
   Dshi_2915 NONE
   Dshi_2921 3080955 .. 3080970 +  -2.5  -3.50853   CCCCAGCCCCAGCCG              CCG-GC ACAGA GCGCGG              TTGTCCTTCAACGCC  48 448
   Dshi_2923 NONE
        ppaC 3083769 .. 3083786 + -14.1  -4.07568   TCCCGGGCTTTCCAG             GGGCGCC TTCG GGCGCCC              TTTTCGCGCGCCCCG  90 51
   Dshi_2925 NONE
   Dshi_2926 3085512 .. 3085530 +  -4.5  -2.57132   AGCGCACGCGGGCTA             CCTCAGC CCCAT GATGAGG             ATTGTGCGCGACGCC  41 65
        ribF NONE
   Dshi_2928 3087010 .. 3087037 +  -9.1  -3.06796   CGACAGCCCCCGGAT        GGGTCAGGGGCA GCATG TGCCCC-GCCCC        TTCGATCACCTGCGC  57 72
         prs 3089937 .. 3089966 +  -7.7  -2.54803   GACGGGGAAGAACAA       GAAAAAGCCCCGC CGAA GCGGGGCCCTGTC        ATCTTGCTGTCTTGG  51 443
        clpA 3098682 .. 3098703 + -14.4  -4.62475   CACAGCACCCTTAAA           CGCCCGGC CCCCGC GCCGGGCG            TTTTCATTTCTCGGT 100 49
   Dshi_2943 3103948 .. 3103964 +  -2.1  -4.15788   TCCGCGACCCCGCCA              CCGGTGC GCC GCACGGA              TTTCTTGACGCCGTT  58 335
   Dshi_2950 3112078 .. 3112093 +  -7.6  -3.14132   CTGTGCCGCTGGCAA              GGCAAT TCGA ATTGCC               TTGGTCCAGCCCGAC  56 180
   Dshi_2956 3117929 .. 3117944 +    -9  -3.53811   AGCTGGGCCGAAGAA              GCGGTT TCCA AACCGC               TTTGCCCCGGCTGGG  68 209
        xghB NONE
        xdhA NONE
        xdhC NONE
   Dshi_2961 NONE
   Dshi_2962 NONE
   Dshi_2963 3130256 .. 3130270 +  -3.4  -4.07568   CGCCTCCAGCTGACC               CGCGCG AAC TGCCCG               TTTTCCGGGCACCCG  58 28
   Dshi_2964 3131533 .. 3131555 + -10.5  -5.60993   CCCAGACACACGAAA           CCCACCGTC ACCCC GACGGCGGG           TTTTTTTATGCAACG 100 49
   Dshi_2967 NONE
   Dshi_2968 3136365 .. 3136389 +  -6.3  -3.28712   AAACCCGTGCGCCTC          GCGCTCTGAGC CCC GCTCAGGTCAC          TTCTCGGCCAGCGCG  55 17
   Dshi_2971 3138610 .. 3138625 +  -6.1  -3.08996   GATCAGGTTGTTGTT              GACGC CGATCT GCGTC               TCTTCCGTCAACATC  51 91
   Dshi_2979 NONE
   Dshi_2980 3147361 .. 3147377 +  -4.3  -3.25719   TTGACGCAGGTTACC              TTGCGTC GTC GGCGCGG              TTGGTCATATGGTCG  48 80
   Dshi_2981 NONE
   Dshi_2982 3149171 .. 3149205 +  -8.5  -2.80074   TTCCCCAGAACTGAC    CGGGCCGCGCGGGC CTTGACGC GCCCGCGCC-TCCG     TCCTCTTGTGCGGGC  54 27
   Dshi_2983 NONE
   Dshi_2984 3151288 .. 3151301 +  -2.3  -3.48276   CCGCCAGTGGGCACA               GGCAC CTTG GTGAC                TTCTGTACAGCCAAC  47 304
   Dshi_2987 3153590 .. 3153615 +  -3.9  -5.09173   CACCTGCATGAAGTG         TTCAGACTGCG GCAT CGAGGTCGGAA          TTTTTTCGCATGTTG  81 297
   Dshi_2988 3154072 .. 3154097 +  -7.5  -3.08679   CTGCGGTCAAGCTAG         CGGCCAGGTCT GAAC AGACCTAGCCC          TCTTGCGTGGCAAAC  54 3
   Dshi_2990 3155670 .. 3155708 +  -5.1  -2.52464   GTGCAGAAATACTCC  GG-GGGGGGCG-CGACCAC GAC GGGGGCGGCGCCCTCAACC  TCCGTTGACGCCCGC  43 75
   Dshi_2991 3156243 .. 3156259 +  -2.1  -2.72379   ACGCAACAGCCCGAA              CCGTGGG AGT TCCGCGA              TGATTGACGGCTTCA  39 2
        dehH NONE
        rpsO 3158394 .. 3158415 +   -13   -4.8048   GACTGAGATTTCGAA           GCCCGCTC CGACCC GAGCGGGC            TTTTTGCTGTGCGGA 100 51
         pnp 3162180 .. 3162206 + -19.5   -2.9155   CCGCGAAACACTCCG         GCACCCTCGGC CTTGC GCCGAGGGTGC         TGTGGTGTTCAGACC  93 74
   Dshi_2998 3164912 .. 3164929 +  -8.5  -3.30969   GACCTTCCAGAGATT             TGTTTCG CATG CGAAACA              TTCAATTTCCTGAAT  60 124
   Dshi_3004 NONE
   Dshi_3005 3172177 .. 3172234 + -10.9  -2.52896   AGCAGATGGCCCACA TCCCCGAGCCCGGTGCCCGGGTTGAGC GCGA GCCCCGCCTTGGCCCCGGCCCCGCGGA TCGCTTGCAGGGTGC  59 345
   Dshi_3013 3182925 .. 3182951 +  -3.6  -4.07568   TGTGAACCGTGGACT         CAGTTGCCGC CCAGGTT GCGGGGGCTG         TTTTCCGGCGAGACA  58 36
   Dshi_3015 3184699 .. 3184712 +  -5.9  -3.28924   CGCGGGTGACGGTGC               GGCGT GCTT GCGCC                TTCTCCGCCCCCATG  52 32
        deoC 3185771 .. 3185789 +  -4.4  -3.28785   GACGCACCGGCACGC             GCTGGGCT GAG GGCGCGGC             TTGAGTATTTTCAGA  48 16
         ald 3188245 .. 3188255 +  -2.4  -4.49756   CTTGGTCGACCGGAG                 GCGC GCA GCCC                 TTTTCATCTTTGGAA  65 103
       dapE2 NONE
        puuC 3192617 .. 3192629 +  -9.1  -2.78384   CGGGCAAGCGCGGCC                CCGAG GTC CTCGG                TCTCGTACAGCGCCA  55 512
         ada 3194942 .. 3194969 +  -6.2  -2.76964   CTGAACCGGCAAAAG        GGCGCCGCGA-CC GTG GGCTTGCGCCGTC        TGCTATTGAATATCC  46 37
   Dshi_3025 NONE
        pdhR 3196505 .. 3196522 +  -9.8  -4.12902   CCGAACAGCAAAAAA             CCCGGC ACGGAG GCCGGG              TTTTCCACGTGGTTC  81 44
   Dshi_3034 3203065 .. 3203110 +  -6.7  -3.18681   GCCGGTCACCGGCTT GC-GCAGGGCGGTCCCGGCG ATCTCCC CCTCGGGGCGGACCTGCAGC TTGATCGCATTGCGC  52 215
   Dshi_3038 3208627 .. 3208637 +  -8.2  -3.01712   GCTGAACGGACTGAA                 GGCC TGA GGCC                 TATTCCGGCGCGCCG  57 19
        rbfA NONE
        truB 3211395 .. 3211409 +  -3.5  -2.64099   GCACCCCACCCGCGT               GTTCC AACAC GGAGC               CTTGTGATGGACGAC  39 4
   Dshi_3043 3211710 .. 3211728 +  -2.2  -3.05596   CCCCGGCTTTTTCCG             GGGCGTTC GAG GTTTGCCC             TTCCCTCACCGCGTG  41 41
   Dshi_3044 NONE
   Dshi_3045 3214475 .. 3214498 +  -4.4  -3.40403   TTGTGGGCTGCCACG          CGC-GGCACCC AGA GCGCGCCTGCG          TTGTCCTCGGACCCG  51 174
   Dshi_3048 3217818 .. 3217840 +  -7.7  -2.78384   CAGGCGCAGGGAGGT          GCCGCGCAGG AACC CCT-TGCGGC           TGTAGTCGGCGAGCA  51 482
   Dshi_3057 3225662 .. 3225695 +  -7.3  -3.86346   AGGGGTAAAGCGGTC     TGTG-CGGGGGCGCTG CCC CCGAGCCCCCGACGTA     TTTCTGCAAAGATGA  68 33
        tlpA 3232955 .. 3232978 +    -8  -3.01712   GTCGCCTCGATCTTG          CCCCGGTGGC GGAC GATGCCGGGG           TCTTGCAGCAGGCGC  53 320
   Dshi_3065 3234394 .. 3234409 +  -4.6  -3.16564   TGAGACACGATGTCA              GGTGCC CGCA GGCACG               TTCCTCCACTAGAGC  48 236
        atoB 3235758 .. 3235774 +  -6.5  -2.78935   GGCCGGACAAAAAAC              TGACCTC GAG GAGGACA              TATCATGGGACGTGT  49 105
       fabG1 3236522 .. 3236552 + -19.8  -4.26903   TTTGCGCGTTAGGGT       TGGGCCGGTCCC CGCGCGC GGGACCGGCCCA       TTTTCATGCCGTAAC 100 46
   Dshi_3068 3237822 .. 3237859 +  -5.7  -3.61398   AGGGTCAGTTCGCTT  GCAGACGCT-CGATCTC TTCCTT GAGA-CGTAGCTTCTGC   TTCTTGAGCGAGGCA  57 96
        ispB 3240631 .. 3240688 +  -9.6  -3.91506   CGCCTGCGCATGGAG CCGGAGCGCGGTCGC-GGCATCGGAGG ACCCG CCACCGATCCCCGCCGCCGCGGGCAGG TGTTTTTCCAGATGG  73 525
        greA NONE
   Dshi_3077 3246221 .. 3246233 +  -4.7  -2.62184   GTGAGCGCGCTTGCC                CCTGC CGC GCCGG                TGGTCTAGCAGGCCC  43 37
   Dshi_3078 NONE
   Dshi_3079 NONE
   Dshi_3080 NONE
   Dshi_3081 3252689 .. 3252710 +  -6.5  -3.53012   GGCTCCTGGGCCAGT           GCCGCCGCGA TCA TCGCG-CTGC           TTTGGCCCGGCGCCG  56 442
   Dshi_3083 3253898 .. 3253937 +  -5.4  -3.55761   GGCCTGAGGGACGGG  CCAGATCGGCCCGGAATG CGCA CCTGCCGCGCCGGCCCGG   TTTGGGGCCTCAGTC  55 34
   Dshi_3085 NONE
   Dshi_3086 NONE
   Dshi_3087 NONE
   Dshi_3088 3258662 .. 3258688 +  -7.8  -3.34398   CGGGCGGCGCGGGCT         GACCCGCGCGGC GCA GGCGGGCGGATC         TATTTCCGGCGCAGA  58 24
        pyrB NONE
   Dshi_3092 NONE
   Dshi_3093 NONE
       pyrC1 NONE
   Dshi_3095 NONE
   Dshi_3096 NONE
        ubiA NONE
   Dshi_3101 NONE
   Dshi_3102 3270845 .. 3270874 +  -4.9  -3.25823   CCCCGCCGCGAAGCT       GTCCAGTTCTGCGC CCA GCGC-GAAAGGGGC       TTGCTGTACCCGAAC  49 426
        rhtB 3273708 .. 3273726 +  -5.8  -2.59564   CAGCCGTGGCTTGAC             GCACCGGC CCG GCCGGCAC             CTTCTGGACTCGCAA  46 112
   Dshi_3108 3274816 .. 3274829 +  -3.1  -3.11634   TGCCATTCCGACATC               GCGGCT CCG AGC-GC               TTGCGTGGTCTGCGG  44 319
        aslA 3279109 .. 3279134 + -16.1  -3.25823   CCGCACCGACACGAA         GGGGCCGCGTT CTCG GGCGCGGCCCC          TTCCTCTCCCCACAC  88 42
   Dshi_3112 NONE
   Dshi_3113 NONE
   Dshi_3114 NONE
   Dshi_3115 NONE
   Dshi_3116 NONE
   Dshi_3117 NONE
   Dshi_3118 3286357 .. 3286373 +  -9.3  -3.61398   AGGTCCAGCGATATT              GGGGCGG GGT CGGCCCC              TTGTTGCGCCCGCGC  64 73
        qseB NONE
        qseC NONE
   Dshi_3126 3294556 .. 3294586 +  -4.7  -3.53012   CCGGGACGGCACGCT      TGGGC-GGTCTGGT GGAG ACCAGACAAGACCA       TTTGGGAGGAGACCG  53 134
       ugpB2 3296352 .. 3296383 +   -10  -2.91681   AGTGACGCCATGAAC      CCGG-GGGCCGCCGT ATC GCGGCGGCCCTCCCC      TCTCTGGGATTGGAA  61 36
       ugpC5 NONE
       ugpC1 NONE
       ugpA2 NONE
       ugpE1 NONE
   Dshi_3132 NONE
   Dshi_3133 NONE
   Dshi_3134 3302234 .. 3302275 + -10.1  -3.53811   GCCGCCCCCGAAACG CCCGCT-CACGAAACATGTG ATC CGCGTGTGTCGCGGGGCGGG TTTGGGCCCGATCGG  70 91
   Dshi_3135 3303134 .. 3303163 + -17.9  -2.55351   GTAAACCAAAGCCAA       GGCCGACCCCG AACACACC CGGGGTCGGCC        ATTCGTCTGCAAAAA  86 37
   Dshi_3136 3304243 .. 3304260 +  -7.7   -2.8474   CCCGGCGCCCGGGCA             GGCCC-GA GAA TCAGGGCC             TCGTTCTCGATCACC  53 106
        garL NONE
        accA 3313909 .. 3313930 +  -3.7  -2.76696   CCATGGGGACCAAGG           GCC-TGGC GGCCTGA GCCATGGC           ATTGTTGCACGCAAG  42 12
   Dshi_3147 3314771 .. 3314806 +  -4.5  -3.63744   CGTCCAGCGAGAAGC    CGACGGAGGCGGCGC CGAGCA GCCCTGTCGCCGTGG     TGTTTTCCGCAAGGC  55 99
         dat NONE
   Dshi_3151 NONE
   Dshi_3152 NONE
   Dshi_3153 NONE
   Dshi_3154 NONE
   Dshi_3155 NONE
   Dshi_3156 3322379 .. 3322392 +  -5.2  -3.28712   GGTGGCCTGACGCCT               GCCG CGGGTC CGGC                TTGTGGCGGCGGGAG  50 31
   Dshi_3157 NONE
   Dshi_3158 3323959 .. 3323976 +  -2.5   -3.3341   GATCCGGGGGGCGGT             CCGCGAC TGAT GGCGGGG              TTCTGGAGCGTTTTT  45 16
   Dshi_3159 3325633 .. 3325673 +  -9.5  -3.54919   AGTTCCGGGTCATCA  TGCCCAGGGCCAGCCCG AGAATTC CGGGCAGGCTGAGGGCG  TTTCCGCCGATGGTT  64 395
       apbE1 3333323 .. 3333333 +  -2.4  -3.55444   CCCGGTTTCCCGGTG                 CGCG TGT CGAG                 TTTGCCACCTGAAGC  49 3
       cycA1 3333788 .. 3333816 +  -8.2  -2.64803   GGACGCTCAACGGCG       TCCGTCCGCCT CGTCCATC AGGCGG-CGGA        TCCATTTGCCCGTGG  53 54
       nosR2 NONE
   Dshi_3182 3346894 .. 3346915 +  -2.8  -3.11178   GCGGAGTAACGCAAG           CGGGCGCG GCAACA CGCCCCGG            TCTTGACGTTGGTTA  44 32
        norC NONE
        norB NONE
        norQ NONE
        norD NONE
        norE NONE
   Dshi_3188 3352445 .. 3352463 +  -7.4  -3.13403   CATCATGCGCTGGCG             CGGCAC CTCGCCC GTGCCG             TCTTCGTCGGCGAAG  56 56
         dnr 3355269 .. 3355283 +  -5.6  -4.25104   TCCGCTGAGGTCGCA               GGCGCA TGC TGAGCC               TTTTCGTCGCAACCC  71 33
   Dshi_3192 NONE
       nosR3 NONE
        nosZ 3360068 .. 3360081 +  -2.3  -2.83715   CGAACCGCGGGACGC               CTGAC AATG GTCCG                TCTCCTGGTGCTCGC  40 22
        nosD NONE
        nosF NONE
        nosY NONE
        nosL NONE
        nosX 3364903 .. 3364915 +  -5.5   -3.3506   CGCAATTATCAAATT                TTCCC GAA GGGAG                TTGTCGGGCTTTCGA  52 355
   Dshi_3200 3365927 .. 3365950 + -11.6  -5.71712   ATGCCACAGCGCATT          GCCCCGGTCT CCAT GGCCCGGGGC           TTTTTTTGTCTGGCA 100 90
   Dshi_3201 3366433 .. 3366455 +   -17  -4.31085   ACCCGCAACAGAAAA           GGCCCGGTCG ATG TGACCGGGCC           TTTTGCGTTGCTGTG 100 50
   Dshi_3205 3370437 .. 3370461 +  -8.6   -4.0641   GATGTACTCCATGAA         GAGGC-GGGTC TTGG GATCCTGCCTC          TTTCTGTGGGTGAAC  72 97
   Dshi_3207 3372799 .. 3372828 +  -4.9  -2.90219   AAGCCCCCCCGGGAG       GCGGGCCCGAACGG GTA TCTTTCGGGGC-GC       TGTCTGGGCATTCTG  46 198
   Dshi_3208 3374498 .. 3374510 + -10.5  -3.14564   TGCTCGTTCACCGCC                GCGCC AAA GGCGC                TTGCTGCCCCGGTCC  62 140
        ymdC 3377290 .. 3377301 +  -7.2  -3.34398   CACGACGCCCCGCGC                GGCC TCCG GGCC                 TGTTTCGGCGGCGGC  58 195
   Dshi_3213 3381495 .. 3381512 +  -6.9  -3.48395   CTGCATAAAGAGCAC             GCAGCAC CGAA GTGCGGC              TTCTATGAAAACCAT  57 480
        cse1 NONE
   Dshi_3216 NONE
        cse3 NONE
        cas5 NONE
        cse2 NONE
        cas1 NONE
        cas2 3390412 .. 3390457 +  -8.2  -3.18264   TGCCGGGCTCCCCCG CCCCCGCGG--GGATAGACCCG ACAC CGGGGCGATCCGGTCGCCGGGG TTCATGGCTCCCCCG  58 282
   Dshi_3222 NONE
   Dshi_3223 NONE
   Dshi_3224 3394268 .. 3394303 +  -4.4  -3.41053   CGACGGACCGTCACC    CGGTCCGGAGCAAGGC GATA GCCCTGCCACGGCACG     TTCTCGATGATTTCC  51 63
        dapF NONE
   Dshi_3229 3399190 .. 3399202 +  -3.3  -2.71011   CGGCCTGACCGGGCA                CCCTC TCG GAGCG                TCCTTGAAACAGCAT  40 33
   Dshi_3230 3399483 .. 3399493 +  -5.4  -4.90455   GATTTGTTTCGCGTG                 CGAA ACA TTCG                 TTTTTCTGCATGTGT  80 57
   Dshi_3231 3401447 .. 3401471 + -18.5  -4.18018   AACTCGCACAGAAAA          CGCCCCGCACG AAA CGAGCGGGGCG          TTTTCAATCGGAAAA 100 151
   Dshi_3232 3402198 .. 3402218 +    -4  -3.53012   GAGGTCGGTCGCGCT            GGCCAT CATCCCCAC ATGGCC            TTTCCAGAACACGAG  51 167
        cynT 3406039 .. 3406051 +  -3.3   -2.7634   CCATGGCGACACCGA                AGCCT TCG AGGCC                GTTTAGGGTGGAATT  40 7
   Dshi_3237 NONE
   Dshi_3238 NONE
   Dshi_3239 3408300 .. 3408318 +  -8.8   -3.7732   GGTTGCCGTGACCTT             GATCGCCG GGT CGACGATC             TTCTTGGTCTCGGCG  68 371
   Dshi_3242 NONE
   Dshi_3243 NONE
   Dshi_3244 3413771 .. 3413784 +  -9.5  -3.73775   GGGGCGCGAGTCCCT               GCCCC CGGC GGGGC                TTTGATGGCGCTGCC  71 146
   Dshi_3245 3414907 .. 3414923 +  -4.4  -4.07885   CCATGGTCCGGCGGG              CGAGTT GCAGA AGCTCG              TTTTCCGCGGCGCTG  62 358
        flgB NONE
        flgC NONE
        fliE 3417195 .. 3417210 +  -3.3  -3.61715   TGAGGATGCCGGTCT              GATGA CGGAGA TCATC               TTCTTCGACACCCTG  51 24
        fliQ 3417438 .. 3417456 +    -3  -3.28924   CTTCCAGGCGGAAAT             CCTGCCGA CGA TCGAGAGG             TTCTGACCCGCCATG  46 1
        flgF NONE
        flgG NONE
        flgA NONE
        flgH NONE
       fliL1 3420662 .. 3420687 + -14.7  -4.31835   GTGAGCTGAGTGTTG         CGCGCCAGCTGC AGG GCGGC-GGCGCG         TTTCTTCTGAGCCTT 100 32
        fliF NONE
        fliH NONE
        fliN 3431906 .. 3431919 +  -3.7  -2.62983   GCTGACCGAGGTGAT               CTCGC CCGA GCGCG                TCGTCTGACCATGCG  41 4
        fliP 3432668 .. 3432685 +  -2.7  -4.59109   ATGTGACGGGCAAAG             TGTAAAC TTGA GTTGACA              TTTTTGGCGGATGTC  68 35
   Dshi_3268 3434202 .. 3434214 +  -4.7  -4.07568   GCTCAGCAACTCGGT                CAGCG CAT CGCGG                TTTTCGACCCGGCCC  62 265
   Dshi_3273 3438518 .. 3438529 +  -4.4  -4.18401   GTAAACTTCATCTTT                TCGA TCAA TCGA                 TTTTCGACTATCTCA  63 52
   Dshi_3274 3439857 .. 3439871 +  -9.2  -3.24456   CGGATGCCGACGCAG               GGGTCG TGG CGGCCC               TTGGTGATGATCTCT  61 311
        fdhD 3449653 .. 3449693 +  -4.5  -2.82516   AGACCCGAAGTCCCG  CCGCAAGAGTGCGCAGC CATGAGT GCGGCGCGCTATCCCGG  TGTGATCCTGGCGGG  42 4
        mobA NONE
       moeA3 3452205 .. 3452222 + -10.5  -2.79684   CGCGGAATTTCCAGC             CGCCGGG TGAT CTCGGCG              TCCTTGAATTCGTCC  57 155
   Dshi_3290 NONE
   Dshi_3291 3458490 .. 3458500 +  -6.8  -3.14344   CGAACACCAGGTCGC                 TGCC ATC GGCA                 TTGGTGCCGCGCATG  52 291
   Dshi_3298 3464891 .. 3464930 +  -7.2  -3.14132   CACCTTGGGCCGGGC CGCGG-GCT-CGTCGG TCTTGGGCAC CCGGCGCAGCACCGCG  TTGATCCGCAGCAGC  52 357
        ilvE 3467006 .. 3467064 + -11.5  -2.57132   CGCGCCTCGGCGGAC GCGCGGCGCGGCTGGTGGTGGGCGCGCT GGTC GGCGTGCTGGCCGCC-GCCGTCCTGCCC CTTCTCCGCACCACG  62 215
   Dshi_3302 NONE
   Dshi_3304 NONE
   Dshi_3312 3476357 .. 3476376 +  -2.8  -3.78934   TCAAGATCAGCGATC            CG-GGCG CAAAGAC CGCCGCG            TTGTTCTCCGACCAG  56 183
   Dshi_3315 3478559 .. 3478576 +  -4.7  -2.57211   CTCCGAGGGCTGGAT             CGCCGGG CTGA TCCTGCG              GTTCTAGGGCCGGGT  43 1
        serC 3480900 .. 3480921 + -10.8  -3.14795   CCCCGAACAGATCCG           GTCCGGCC AGTCTC GGCCGGGC            TATTCCTGACAATTT  67 70
       serA1 3482656 .. 3482670 +  -2.1   -2.5955   CGGTCGCCCCTCGGA              GAGAGC ATGC GC-CTC               TACATTCTCGGCGAT  38 74
   Dshi_3319 NONE
   Dshi_3321 3484665 .. 3484688 +  -6.6  -3.53224   ACCGCCCTTGGCGAG          CGCTTCGACG AACC CCTCGTAGCG           TTTGCGCGCCCGGTG  56 421
       sgaA1 NONE
       dctP3 3491551 .. 3491584 + -13.7  -3.60098   TCGCACAGATTGATC     GCGTGCCCGGTGCTC TTCG GCGCCCCGGGCAGGC      TTTGCCCTACGACAT  81 87
       dctQ1 NONE
       dctM4 3493425 .. 3493439 +  -2.1  -2.57132   CCTGGTGGAGTATTT              CTACGG ATGA CCG-AG               CTTGTGACAGAGACC  38 16
   Dshi_3329 NONE
       yfdW1 3495572 .. 3495584 +  -4.8  -3.55444   TGCCGGGGTCACCAC                GCCT TCCCC AGGC                TTTCCGAAATCAGGC  55 161
        bktB 3496915 .. 3496927 +  -3.3  -2.72043   GCAGGGAATCGCCCT                CGCAT TCG AAGCG                CTTTAAGCGGAGATT  40 7
   Dshi_3332 3499644 .. 3499654 +  -2.4  -4.15044   ATGAAGCGGGCCATG                 GCGC CGC GGGC                 TTTCTTGGCAAAGAA  58 188
   Dshi_3336 3503421 .. 3503436 +  -6.1  -3.67976   GCTGAGAAACCTGTT              GCCCT CGGCGT AGGGC               TTTGCGCTTAATCGC  57 36
   Dshi_3337 NONE
        mepA NONE
   Dshi_3339 NONE
   Dshi_3340 3507470 .. 3507493 + -16.7   -3.6715   CCGAAACTTTCGGCT          GGGCCGCCC CGAACC GGGCGGCCC           TTTCGCATTCAATAC  91 238
        rimK 3509006 .. 3509025 +  -3.4  -3.14468   GAAATCCGGCAAGCG            GCTCGCCT GAGC GGGCGGGA             TTGCGTATCGTAAGG  44 16
   Dshi_3342 NONE
   Dshi_3343 NONE
   Dshi_3344 3511731 .. 3511746 +  -3.9   -3.6968   ACGCGCAACCTCGTC              GGCCG GACCCA TGGCC               TTGTTGGGATTGTCG  54 91
   Dshi_3348 3517013 .. 3517048 +  -2.5  -2.80816   GGCTTTCGGTGCCGG    GGGCGCTGCGC-TAGG AGACG TTTATGCCCATCGCCC    TGTCGTCCCTGCCCG  39 45
        ybbB 3518504 .. 3518528 +  -5.5  -3.53012   CACAGGGCCGCAACC          TGCTGCCCGGG AGC CGCGGCCTGCA          TTTCCGCCGCCAGAA  54 432
   Dshi_3351 NONE
        gyrB 3529332 .. 3529362 +  -9.6  -3.22448   ATGATCCGCTGGCGG       GCCGGACCGCGTGG ATG TCACGCGATCTGCC       TTAGCTTGGCTTTGC  61 255
   Dshi_3356 NONE
   Dshi_3357 3531358 .. 3531378 +  -3.9  -2.81547   AAAAATTATCCTCGC            CCCTAAAAG GCA CTTCTTGGG            TGGTTGGTGTACCCG  42 189
   Dshi_3364 3537986 .. 3537996 +  -3.2  -2.57132   GCCGGCCTCAACGGG                 CTGG ACA TCAG                 GTTGTAGGAGAGAAC  39 8
        flgD 3538679 .. 3538726 + -11.5  -3.53811   CGCAATCCTGAAACT CTGGCGATACCATGGGAC-GC CGCGTATA GCAGGCCCATGGTATCGC-AG TTTAACCGAAATCCA  73 30
   Dshi_3366 3539915 .. 3539925 +  -4.6  -3.75153   CTGCAGCAGGATCAG                 CTCG GTC CGGG                 TTTCCATTCCGAACC  55 326
        mutM 3542815 .. 3542825 +  -2.4  -3.15544   AGATAGCCTTGCGCC                 CCGC GCT GCAG                 TTGGTAACCCTGCCC  43 35
   Dshi_3370 3543655 .. 3543665 +  -2.4  -3.14878   CAAGTAACCCTTAGG                 GGCG TTT CGCG                 TGTTGACTTGGGGCC  43 34
        rpsT 3544029 .. 3544048 + -12.8  -5.27938   CAAAAAAAGTTGAAA            CGCCTCCG CTTG CGGGGGCG             TTTTTGTTTAAAGAT 100 49
        yibN NONE
        dnaA NONE
        dnaN 3547326 .. 3547336 +  -2.4  -2.78816   CATCTACGTGGTCAT                 GCCG ATG CGGG                 TGTGATCCGGGGTGA  39 10
        recF 3548571 .. 3548588 +  -3.3  -3.69395   TTCCTTTACCTCCGC             GAGCCCG ATCC CCGGTTC              TTCTTCCATCGTCAC  53 163
   Dshi_3381 3556172 .. 3556186 +  -6.4  -4.10453   GTGCAGTTCTATTTC               GGGTTG GGA CAATCC               TTTTGAAACGGTTTC  67 5
   Dshi_3382 3559521 .. 3559531 +  -6.8  -3.53091   ACCCGTGACAAAGCC                 CCCA AGG TGGG                 TTTCCCAGGCCAACT  58 103
        exeA NONE
   Dshi_3388 NONE
   Dshi_3389 3569379 .. 3569389 +  -5.4   -2.7035   TCCGCCCTTGCGGGC                 GCAA AAC TTGC                 TAGTGTCTCAGTCCC  45 416
        leuB NONE
   Dshi_3394 3573175 .. 3573187 +  -9.1  -3.39505   CTGCAGCATCACGAA                GGGGA TGA TCCCC                TTGTAGATGTGCCCT  63 168
   Dshi_3404 3583353 .. 3583393 +    -4  -3.85698   CAAGCTGGGCGACAT CGAGGCCAAGATCAT-CTG CTGT CTGCATGATCTGCGCTTCG  TTTATGCGCCCCGAC  57 221
   Dshi_3406 3584758 .. 3584790 +  -8.3   -2.8805   CCGCACACCGGGTCA      GTGTGCCCTCTCGCG CAG CGTACGGGGGCATAC      TATGTAAAGACTGAT  55 91
        dsbD 3587295 .. 3587313 +  -4.4   -4.1711   AAATCCTGCAACTGC             ACGGGCTC TTC GATCCCGA             TTTCTTCACCATACT  66 362
        hemD NONE
   Dshi_3417 3596396 .. 3596407 +  -2.2  -2.59748   CCAACTGAGGGCGCC                CCGA TGCT TTGG                 TCACTTCTCAAGATC  38 33
   Dshi_3418 3597959 .. 3597985 +  -3.7  -4.61231   GGTACCCGGTCCAGA        CTGATG-CCTCG TCGC CGAAGACGTCAG         TTTTTACCCATATGG  72 77
        glpK 3601195 .. 3601245 + -13.6  -2.78384   CGCCGAAAATTCTCT GGAAC-GA-GGCCCTTTCAAACGCG CTAT CG-GCTTGAAAGGGCCATCTGTTCC TCTGGTCCACGAACA  72 296
        rafI 3609768 .. 3609778 +  -2.4  -2.72344   GTCCCATCCCCGGAC                 TCCG AGA CGGC                 TCGTTCGCCATACCA  38 198
   Dshi_3429 3610815 .. 3610846 +   -10  -3.01791   TGACGGCACCAAGAA      CGAAAAAGGCCCGC TGCA GCGGGCCCTGTCCG       TCTTAACAAGAAAAT  62 94
        regB NONE
   Dshi_3433 3614997 .. 3615008 +  -5.8  -3.09834   GCCCTGCGGCGCAAA                GGCT TGCG AGCC                 TTGCATCATCCGGTA  49 48
   Dshi_3434 NONE
   Dshi_3435 NONE
   Dshi_3436 NONE
        addB NONE
        addA NONE
       trxA1 3623941 .. 3623958 + -14.1  -4.41047   CACACGCACCGGAAC             GGGCGCC TTCG GGCGCCC              TTTTGCTTGGCCCGT 100 49
        hslV 3624582 .. 3624594 +  -4.7  -3.90744   GCGATCGACGCCTGA                CCCGC AAC GCGGC                TTGTTTCCACGCCGC  60 26
        hslU NONE
   Dshi_3442 3627348 .. 3627380 +  -6.1  -3.62096   ACGCCGAGACGTTCG      GGGATCGGACCGC CCTGATC GCGGTCCTTGCCC      TTTCCGGTGATCACC  56 167
        fxsA NONE
        secB 3630715 .. 3630730 + -11.8  -4.67038   AAGAGATTCGACAAA              GGCGGC ATGT GCCGCC               TTTTCCTTTTCCGAC 100 78
   Dshi_3452 3634238 .. 3634256 +  -5.3  -2.90763   TCTAAGGCTCTGTCA            GCG-TTCC GTCC GGAATCGC             TCTCTCACGTATGAC  46 69
         rho NONE
        trmE NONE
        gidA NONE
        gidB NONE
       parA1 NONE
        parB 3641251 .. 3641268 +  -5.5  -3.09516   GTTCCTGCCAGCCCA             GAATGGG GGCA CCCAATC              TTGGATGATCCAGAA  49 198
        hrcA NONE
        grpE 3646125 .. 3646154 + -13.6  -4.15565   CTCTACAAGGTCAAA       GCCTCGGGGATC AGTCGC GATCCGCGAGGC        TTTTCAACTCATAGA  93 49
        maeB 3651265 .. 3651280 + -10.4  -3.06796   CGCCTTCGGTGGCAA              GGCGCT TCGA AGCGCC               TTGGCTGCGCTCAGC  62 131
   Dshi_3469 3652976 .. 3652990 +  -2.1  -3.54543   CACCGCCGTCTCCGA              C-CTCG GCCG CGAGCG               TTTCAAAAAATACCT  48 108
        ilvA 3657590 .. 3657601 +  -2.2  -3.25719   ATCACCGAAGATGCG                CTCT TGGC GGAG                 TTCCTCATCTGATGG  45 2
        pcaB 3659056 .. 3659068 +  -6.3  -3.89524   TGAATATGGCTCAGA                TCGAA GGC TTCGA                TTTCTGGGATCACCT  64 422
        modE NONE
        modA NONE
        modB NONE
        modC 3665867 .. 3665885 +  -5.2   -4.0896   CTATCCCGTTAAGGT             TTCCTGAC CGG GACAGGGA             TTTTGAGCGGCATTT  63 446
   Dshi_3485 3667567 .. 3667587 +  -6.7    -3.727   CCTCGCCCGGGTCTA            TCCCGCCGC CGG GCAGCTGGA            TTTCCGTCTCCTGCC  61 359
        hslO 3668794 .. 3668809 +  -3.2  -2.80074   CGAGGCGGTGGAGGG              ACCAGA TGCC TCTGGA               TGATCTTGTCCGGCG  40 7
   Dshi_3488 3669388 .. 3669401 +  -3.8  -3.28712   GGGGGTTTGCCGACG               CGCT GCAATG AGCG                TTCTCGCCAGCCGAC  48 15
         cca NONE
   Dshi_3490 NONE
   Dshi_3491 NONE
        rumA NONE
   Dshi_3493 NONE
   Dshi_3494 3677373 .. 3677385 +  -5.5  -3.22475   TGGATGCGCCCGGTG                TCTGC GGC GCGGA                TGTTGTAGACCTGCG  51 442
   Dshi_3496 3678291 .. 3678312 + -18.7  -3.66908   GTCCCCGACTCTCCC           CGCGGCGCC CTGT GGCGCCGCG            TTCGTTTTCAGCGCA 100 54
        comF NONE
        crtA NONE
        bchI NONE
        bchD NONE
        bchO 3686619 .. 3686635 +  -7.9  -3.65902   GAGGGAAGGTATTTT              TCGCCGC GCT GCGGCAA              TTTCCGTCCGGTCCA  63 519
        crtI 3689334 .. 3689366 +  -2.5  -2.71712   ACCCCGGCCCCCCTC     GCGCAG-GCCGCGG AATGAG CCTCGACGCCGCGC      CTTTCGCCCCGACCG  39 8
        crtB NONE
        tspO 3691342 .. 3691388 +  -2.9  -3.53091   CGTCTCGCGCTTGAT CGCCCAGAGGGACCGC-GAAAAC CGG GTCTTCGGCGGGGCTTC-GAGCG TTTCCACCGACCCGT  49 445
        crtE NONE
        crtF 3695630 .. 3695654 +  -6.4  -3.39668   TTCGTCACCGGCGTG         GTTTC-CGGGC GCAA GCCCGCGTAAC          TTCTCGCATTTCAGA  57 2
        bchC NONE
        bchX NONE
        bchY 3699425 .. 3699435 +  -6.8  -3.90048   CCCCCGGCCTTCGGC                 CTCC CCC GGAG                 TATTTTTGCACAAAA  65 91
        bchZ NONE
        pufQ 3701309 .. 3701325 +  -9.4  -3.17075   GATCCCGAATTTCGG              CTCCCC CGTGT GGGGAG              TTGGATTGCCGGCAG  61 48
        pufB NONE
        pufA 3701709 .. 3701729 +  -6.1  -2.80816   TCAACTGGTTTGAAC            TGGCGGC TGCAAAC GCTGCCA            TGTGATCGGTCCCCC  46 0
        pufL NONE
        pufM NONE
        pufC 3704931 .. 3704947 +  -9.3  -2.71712   CGACACGGGATCGGC              GCGTGCC CCG GGCCCGC              ATTTCGCACCAGACC  57 156
        dxs2 3706967 .. 3706994 + -19.2  -3.70902   CGAAGGCAAAAATCA        GCCCGGTGTGTC GCAA GACGCACCGGGC         TTTCGGTCTCAGCCG 100 83
        bchF NONE
        bchN NONE
        bchB NONE
        bchH NONE
        chlL NONE
        bchM 3722211 .. 3722228 +  -5.5  -2.73875   TTCTACATTTCCACC             TGTCTGG AGTA CCGGGCA              TGATCTTCACCAAGG  46 5
        lhaA NONE
        puhA NONE
        puhB NONE
        puhC NONE
   Dshi_3543 NONE
        acsF NONE
        puhE 3727882 .. 3727902 +    -6  -3.61178   AAGCAGGGCTGACAC            CGCGGGCC CCCGC GGCCTGCC            TTTCGAATCGATCCC  57 29
       hemA1 3729337 .. 3729364 +  -4.8  -3.53091   GGTTGAACTTTCCTC        CCGTTTCGGGCGT ATT AC-CCCAACACGG        TTTAACCAGCCCCCT  53 67
       cycA2 3729854 .. 3729878 + -21.5  -2.90496   GATATCTTGATCACC          GAACGCCCGGC ACT GCCGGGCGTTC          TCGTTTCGGCGACCC 100 48
   Dshi_3548 3731795 .. 3731807 +  -3.4  -3.25719   GCGACTGTCGCCTAA                GGTT CAACA AACC                TTCATACTGTCGTCA  46 42
        glpQ 3733090 .. 3733140 + -19.1  -3.05384   GCCTCGACTGAGCCC CGGC--GCG-CGCGACCCCGCCCG CCCGCA CGGGCGGGGTCGCGGCCCTTGCCG TTGCGTGGGGCGCCG  91 30
         pip NONE
   Dshi_3552 3736655 .. 3736671 +  -5.8  -3.57144   TGCGTTAGCCCTAAC              TGCGGC AACGC GCCGTA              TTTGGAAATCCGGCG  57 172
         acs NONE
        adk1 3739681 .. 3739694 +  -3.7  -2.94045   TAGAAAAAGGGAGTG               ACCGC AATG GCGGA                TAATTCTTCAACTAA  44 139
   Dshi_3555 NONE
   Dshi_3556 NONE
   Dshi_3557 NONE
   Dshi_3558 3744203 .. 3744214 +  -2.2  -2.61695   TGGAGGCGGATGACC                CCTT GCTG GAGG                 CTGTTTGCACCTGAG  38 0
       dnaQ2 3745807 .. 3745822 + -11.8   -5.7946   CACCGACACATTCGA              CGGGCC GCAC GGCCCG               TTTTTTTATTCCCGA 100 126
   Dshi_3560 NONE
        nusA NONE
   Dshi_3562 NONE
        infB 3751286 .. 3751308 + -16.3   -5.0538   CAGGAAAACGAAAAA           GGGGTGGCC AGATC GGCCACCCC           TTTTTTGGCGTGAGA 100 56
        secA NONE
   Dshi_3568 3758687 .. 3758720 +  -2.2  -3.28924   GGTCATGGTGATGTC     CTGCTCCGACGGGG TGGGGT CTCCGGAGGGGTGG      TTGTGCACCAGGATC  44 117
       alkB2 3763620 .. 3763644 +  -9.9  -3.53012   AGATCATCTGCACGG          TCTTGGTCGCC TCG GGCGCCCAGGG          TTTCGCGGCGAGAAA  67 331
        cysQ 3765110 .. 3765123 +  -3.7  -3.45023   GCGTGGACCTGAAGG               CCGCC TGAT GTCGG                TTCTGGTGGTCATCC  51 18
        kdsB NONE
   Dshi_3576 3767211 .. 3767222 +  -3.6  -3.61609   AGAACACACCTGGGG                CGGC GCTG GCTG                 TTGTGCTTTGCGTCC  51 90
        galU 3768161 .. 3768181 +  -3.1  -2.52464   CTGCAGGAGCTGGCC            TTCGCGCGC AAA GCGGCCGAG            TAACTTCGCGCCCCG  39 2
   Dshi_3578 NONE
   Dshi_3579 3770674 .. 3770692 +   -11  -3.15544   CGGATCAGCCGCTGG             TGCACCTG ATG CGGGTGCA             TTAATGCGGCTGGGG  67 200
   Dshi_3580 NONE
   Dshi_3581 3774140 .. 3774162 +    -9  -3.14294   TCCGATCGCTCTTGT           CTCCGCCGTG TCA CTTGGCGGGG           TTAGCTGTCCATCTT  61 517
   Dshi_3590 3780998 .. 3781029 +    -5  -2.62184   GCAAGAACCTGCGGA      CCTGAGGGCGCCCCG AAC CGGCGCGGC-TCAGA      TGATGTGCCAGGCCC  43 21
        uppP 3788673 .. 3788683 -  -2.4  -4.58395   TGCACCGCGGAAAAA                 TCGG CTT CCGT                 GGCGTCAGGAATAGG  68 30
   Dshi_3592 3782698 .. 3782738 - -13.9  -4.10657   GGACAGGGGCCAAAA  TGGAACGGCCCCGTGGCAA AAC TCACCCCGGGGCCGCCCGA  TTGTCATGTCTGAGA  93 389
   Dshi_3591 3780852 .. 3780865 -  -4.5  -2.76189   CAACCTAGCCAAGGA               CAACG TGGT CGCTG                CGGATGCCATGGGGT  43 185
   Dshi_3589 NONE
        yrbH NONE
   Dshi_3587 3777405 .. 3777415 -  -4.6  -2.72144   CGATGCGTCTGAAAT                 CCAC CAT GCGG                 CCTCCGAAATCACTG  44 35
   Dshi_3586 NONE
   Dshi_3585 NONE
        rpoN 3774793 .. 3774811 -  -3.1  -3.57406   TCCGGAGCAGAAACA             GCCACTT GCAAG AAGTGGG             ATTACCCGGATGATA  51 27
   Dshi_3583 NONE
        ptsN 3773577 .. 3773590 -  -9.5  -4.70659   CCGGACATGGAAAAA               GCCGC GCAG GCGGC                TTACGGTGTGGATTA  86 95
   Dshi_3573 3763249 .. 3763274 -  -5.4  -3.74872   ATCGACCGGATCAAA         CCGGGCAG CTCCACGCTC CTGCCCGA          AGGCGGGCGGATCAA  57 96
        dnaK 3760540 .. 3760578 - -16.6  -3.64822   ATTCCTTCACTTAAA   CGCACGCGCCGACCCGCA AGT CACGGGTCGGCGCAGGGG   TCCGTTTCGCGGGGC  91 41
        dnaJ 3759314 .. 3759360 -    -5  -3.55444   GGGGGATTCGTGAAA GGCATG-GGCGCGCGGCATGGG GGCTA CCC-TGCCGCGCGATGCTTTCC GAAAGGTTAACTCTT  55 32
        radC NONE
        ppiC NONE
        argJ NONE
        mutT 3751286 .. 3751308 -   -17   -5.1166   CAGGAAAACGAAAAA           GGGGTGGCCA GAT CGGCCACCCC           TTTTTTGGCGTGAGA 100 315
       ubiG1 3732788 .. 3732828 -  -2.4  -2.71144   GATGGGCGTGAACTA CATCGCG-CCGCCCACCTG GATG CTGGTGACCACCCGCGACG  GGGCCATCGTGCCCT  38 449
        ppaA NONE
        ppsR 3710971 .. 3710988 -  -4.1  -3.62354   TGTGTAAATCAAACA             CTACAAC GTGA GTCGCAG              CAAGCCTGTCTAGCT  53 91
        bchG NONE
       pucC2 NONE
        bchP NONE
         idi 3706964 .. 3706997 - -10.9  -4.74103   CGCCGAAGGCAAAAA     TCAGCCCGGTGTGTC GCAA GACGCACCGGGCTTT      CGGTCTCAGCCGGGG 100 51
        crtD 3691952 .. 3691968 -  -3.7  -3.74872   ACCGACCCTATGAAA              GCGAT GATCGAG ATCGC              GCGGGTGCCGCAGTC  56 1
        crtC NONE
   Dshi_3511 3690898 .. 3690913 - -11.8  -3.33261   GCTCAACCCCGACAA              GGCGGG CGGC CCCGCC               ACCGCCTAACGCTTC  72 31
        grxC 3687394 .. 3687416 -  -6.9  -2.79183   GTCATCTGCACCAGA          GC-GGCGCGC ATCA GCCCGCCAGC           AGCGCGTCCAGCTTG  49 13
   Dshi_3506 NONE
   Dshi_3505 3686036 .. 3686056 -  -8.9  -3.22298   CTGATGCACGAGGAA            CGCCCCGAC CTG ATCGCGGCG            GAAATCGAAGGGTTC  58 91
   Dshi_3499 NONE
        hemH 3678558 .. 3678572 -  -2.8  -5.40072   TCCTGCTTAAAAAAA               GTGTAC GAG GTACAG               TCTAGAACGCTCACC  91 385
   Dshi_3495 3676682 .. 3676694 - -10.5   -3.0634   AAGGTGACGGCAAGA                CGCCC GAG GGGCG                CTACCGCATCGACCG  60 292
   Dshi_3486 3667087 .. 3667134 - -10.3  -3.21218   ATGCTCGATGACGAA GGCCTGGCCGCCTGGTTCGCG CAGCAC CGGGATCTCGACGGCCCGGCC TTGATGGACATCCTG  62 153
   Dshi_3484 3665368 .. 3665384 -  -5.7  -3.53012   CCGTCGGTCGGCAAA              CCGCATG GGG CTCGCGG              TTGGGCAGAGCTGCT  54 118
        pobA NONE
        pcaC NONE
        pcaH NONE
        pcaG NONE
   Dshi_3475 3658650 .. 3658661 -  -2.2  -4.57341   AACCCTTGGGAAAAA                GCCT GTTT AAGC                 CGCCACGGGTCGCAG  68 20
        argG 3655022 .. 3655037 -  -2.4  -3.26319   AAGCGGCGATACCAA              GGCGCG CAGG CGGACC               GCGACGTTATTTCCC  45 32
   Dshi_3471 NONE
   Dshi_3470 3652361 .. 3652391 -  -8.2   -3.5764   AAGCCGATCCGGAAA      GGGTCGCGGCCCG GTGCTG CGGGCCG-ATCCC       GGGGGGCAAGGCGCA  62 524
       msrA1 3651187 .. 3651202 -  -8.2  -3.57615   CGAAGAGCCTTGAAA              GGCCCC GACC GGGACC               TTCGAAAAACCTCGT  65 114
        mutS 3646125 .. 3646154 - -14.3  -3.69354   CTCTACAAGGTCAAA       GCCTCGGGGATCA GTCG CGATCCGCGAGGC        TTTTCAACTCATAGA  88 6
         rph NONE
        ham1 NONE
   Dshi_3461 NONE
       hemN3 NONE
   Dshi_3459 3640681 .. 3640726 -  -5.5  -4.07687   AGGCCTTGGGCAAAA GCCGG-AGCCACAT-TGCCAA CATGCT TCGGCTCATGTCGCTACCGGC GGAAGTTCTTTCGTA  64 374
         maf NONE
        aroE NONE
        coaE NONE
       dnaQ1 3630614 .. 3630634 - -16.1  -2.84051   GTATCGTCAGGAAAT            CGCGCGGCG CGC CGCCGCGCA            GCAGGCAGCACCGAG  79 58
   Dshi_3445 NONE
        mltA NONE
   Dshi_3443 3626983 .. 3627006 -  -3.1  -2.55545   GCGCGAATAACACAC          TGCCCGC GGCCTTTTGG GCGGACA           TGTTCGGGACCCGCC  39 222
        senC NONE
        regA 3610822 .. 3610839 - -14.1  -5.00339   ACCAAGAACGAAAAA             GGCCCGC TGCA GCGGGCC              CTGTCCGTCTTAACA 100 49
   Dshi_3428 3609506 .. 3609534 -  -5.9  -3.73775   CGCAGGCTTATCAAA        TCGCTGATCAAGC ATG GCTTGTCCCGCAA        GAAGATGAGCGCATA  59 99
        ahcY 3606999 .. 3607026 - -14.8  -3.15999   GGTCGACACATCGAA        GGCCGCGCAGGC ACAT ACCCGCGCGACC         TAGTCATCAGAAGCC  80 54
   Dshi_3425 3606315 .. 3606344 - -14.3  -5.46657   TATCCCAACAAAAAA       TGGGGGGCCCCAA CCCC TCAGGACCCCCCA        TCTTACCCACATGTG 100 182
   Dshi_3424 3604181 .. 3604196 -  -2.5  -2.61548   TGTCATCAGAACTGA              TCCCG GTATCT CGAGA               AAAGGTCAAACTCGA  38 0
       rpoE1 NONE
   Dshi_3422 NONE
         apr 3601202 .. 3601236 - -15.9  -2.71263   AATTCTCTGGAACGA    GGCCCTTTCAAACGCG CTAT CG-GCTTGAAAGGGCC     ATCTGTTCCTCTGGT  78 302
   Dshi_3419 3597875 .. 3597891 -  -5.7  -4.12198   GATAACGTGTCAAAA              GAGGACG AAG CGCCCGC              GCAGAAAAGCGCCTG  67 116
         gcp NONE
        gpsA NONE
   Dshi_3413 NONE
   Dshi_3412 3591261 .. 3591272 -  -2.2  -3.61398   GCGGCGCTCGAATAA                CG-CC ACA GGTCG                TCACAGTTTAGCGAG  49 150
        cycK NONE
        dsbE 3588616 .. 3588634 -    -3  -2.60219   CAGAACGGTCAGAAT             GCGGATCA TGA TGTTCCTC             CGGCCCCGCTGCGCG  39 12
        cycL NONE
        cycH 3586583 .. 3586611 -    -3  -3.78329   TGCGATGAATGCAAA        GCTCGACGCCGA GTGGA TCGCATTCGAGC        GCAGCGATATCCCCA  56 375
       dsbA2 3583116 .. 3583153 - -12.1  -3.05384   TCGGTCCTCAGCCAA   GCAG-GGTTTGCCGCG AACGTGG CGCAGCAAACCTCCGC   CTGATCCGTCAACCG  68 34
   Dshi_3403 3580800 .. 3580816 -  -7.9  -3.01712   TGGTGTCGCGTAAGA              GCCACGC CCC GCGTGGG              CCGCGTTCATGGGTC  54 194
   Dshi_3402 3579330 .. 3579347 -  -6.9  -5.26316   CGATGCGACAAAAAA             GGCCCAC CTCA GCAGGCC              CTCGATATGAGAATG  91 50
   Dshi_3401 NONE
       ubiG2 3577631 .. 3577641 -  -3.2  -5.02476   ACATGCTCTAAAAAA                 TCGC TGA GCAA                 AGCAACCCGCAATTA  78 182
        orfA 3577088 .. 3577124 -  -4.3  -3.72576   GTCTCGTCGATGAAA    GCCAGCCTTTCCAGA TGTCTGG CCATGAAGGGCTGGC    GTTTGCCGATCCATA  56 76
        orfB 3576543 .. 3576561 -  -3.1  -3.92324   TTTTGCAACACCAAA            CCGTCGCA AGCG TGCG-CAG             AGCATTTAGAGCGTG  56 47
       dctP2 3575381 .. 3575409 - -21.8  -3.87373   CACAGGCGTGACAAA        GCCGGAGCGACG GCCTA CGTCGCTCCGGC        TCAGATCATGTGATC 100 45
       dctQ2 NONE
       dctM3 3573039 .. 3573061 - -18.4  -3.40403   GCGCTCTGACGACAA           GGGGCGGACC CAT GGCCCGCCCC           TGTCACATCACATGT  95 49
   Dshi_3392 NONE
   Dshi_3391 3569755 .. 3569773 -  -5.2  -2.82193   ACCACACGGATCAGA             CCTTCAGG GAT CGCGAAGG             GCCATGGTCGAGACG  44 2
   Dshi_3390 3568560 .. 3568571 -  -5.8  -4.16842   TCCATGGCCAAGAAA                CTCG GCGT CGAG                 ACTGATGGCACTGTT  69 439
        wcaJ 3564388 .. 3564401 -  -9.5   -3.8372   ACCTCAACAACACAA               GGCGC CAAA GCGCC                TGTGTGTGTAACTTA  74 107
   Dshi_3385 NONE
        epsH 3560148 .. 3560182 - -17.2   -4.7254   ATCTTTCATGAAAAA     CAGGACCCGTCAGGAA GCA TTCCTGACGGGCACCG     TAGTCATAATTTCAA 100 46
   Dshi_3383 3559125 .. 3559155 -  -7.6   -4.0492   CAATGCGGATATAAA      CAGCCTGAGC-CC GATTCA GGCGCTGAGGCTG       GCGAACGCCCTTATC  69 307
        motB NONE
        flgE 3552000 .. 3552018 -    -6  -3.02739   TTGAAGTGACAGACA             TGATCCAA TCC TAGGATCA             ACGTTTGATGTTAGT  49 23
        flgK NONE
        flgL NONE
        flgI 3547960 .. 3547973 -  -3.7  -3.27525   CTTTCCGAAATCGAA               GCGGC CCAG GCCGA                CGCAACGACCGCGTT  47 482
        ubiE NONE
        ubiB 3539532 .. 3539544 - -10.5  -3.06183   GCCACCTGCAGGCAA                GCCGC GGG GCGGC                GGCCTACGAACAAGC  60 63
   Dshi_3363 NONE
   Dshi_3362 3534855 .. 3534865 -  -3.2  -3.48593   GATCCTGTGACAGAA                 CCCT CAA AGAG                 ATGTTAAATTCCGCA  49 71
        fliC 3533138 .. 3533165 - -12.6  -3.96696   AATAGGAAGAGGAAA        GGGCGCCCCCAG CGAA CTGGGGGCGGGC         CCGATTATCTGAAGA  86 30
        flaF NONE
        flbT NONE
   Dshi_3358 3531495 .. 3531537 -  -4.1  -4.58283   CAAGCTGTTCAAAAA CTCAGGCGC-AGACTGCCAA TGCC TTGGCGTTCCAGGGCCTGAA CTCCTCTCGTCAAGA  72 35
   Dshi_3354 NONE
   Dshi_3353 NONE
   Dshi_3352 3521862 .. 3521874 -  -6.2  -4.08767   GTCATTGCGCGAAAA                CCGG GCTCT CCGG                TGCAGATCGGCCCCT  65 521
        selD 3517835 .. 3517874 -  -4.9  -3.87075   ATCAGCCGGGAGAAA  TGGCCGCGC-GGCTGAAC CCCTT GCGCAAACTGCACGGCCA  CGCCCAGGTCGACGC  58 255
        pncA NONE
   Dshi_3346 3513029 .. 3513041 -  -6.9  -3.71378   CACCGCAGACGCAAA                GCGGC TAG ACCGC                GGCGGAGTGTCGGGG  62 17
        pncB 3511400 .. 3511430 -    -6  -2.78384   TCCGGGCCTACGACA       TCGCCGTGGCCCTG ACA CAAAGCCTCGATGA       TCCGGACTTGCCTGT  47 257
   Dshi_3335 3502442 .. 3502453 -  -5.8  -3.14931   CCTATCGTGGAGCAA                GGTC GCCG GACC                 GCAATATGTCAGTAA  51 34
        recQ NONE
   Dshi_3333 3499118 .. 3499140 -  -6.2  -3.48696   GGACAACAAGACGAA           CCAGCTTGTG TTT CGCAAGATGG           TGAAGGGACTCAATA  56 363
        dld2 NONE
   Dshi_3323 3485489 .. 3485517 -  -3.8  -4.09739   TGAAGCTTTCCAAAA       CCTTGTGGTTTCG CATG CGAAACC-CTCGG        GTTTTTTGCAATGAA  61 86
   Dshi_3322 3484179 .. 3484189 -  -3.2  -3.29471   CTTCGACGAGACCAA                 CCAG ACC CTGA                 TCTATGTCGCCCACG  46 102
   Dshi_3320 3482942 .. 3482955 -  -3.7  -2.80732   ACACCAACGTGAAAT               CCGGC AAGA GCTGG                CTGCACCCGTTGCTG  41 480
        serB 3478123 .. 3478143 - -12.5  -3.53012   CTTTCCCGCCCGAAA            GCGGTGCCC AAC GCGCACCGC            CTGCGCCCTGGACTG  76 480
   Dshi_3314 3477333 .. 3477372 -  -7.6  -3.23692   CATGACGAGGATCAA  GCGGCTCGCCAGGGCAGGC TCA GCCGGCGC-AGCGCGCCTC  CGCCTCTTCGAGCGC  56 5
   Dshi_3313 3476027 .. 3476051 - -11.3  -2.68532   CGCAAATCGAGATCA          CGGGCACCACC TTC GGGGGCACCCG          CAAGATCGGCATCGC  60 170
   Dshi_3311 NONE
        rssA NONE
        mtgA NONE
        gst1 NONE
   Dshi_3307 3470758 .. 3470779 -  -2.1  -3.15861   CATGATCGCGATGAA           GGCC-CGGGC ATC GCCTGCGGTC           TGTTGGGCACCTCGC  43 51
   Dshi_3306 NONE
   Dshi_3305 NONE
   Dshi_3303 3467117 .. 3467155 -  -2.8  -4.42386   GTCCGAGCCAGAAAA   CACACGGCGCGACGGCCC CCT GACCCTCCGCGACGCCCG   CCTGATCGGGAGCAG  66 275
   Dshi_3300 NONE
        petR 3464108 .. 3464129 - -11.5  -2.62184   TGCTGGCCGAGATCA           CCGTCGACG TGAC CGGCGACGG            CACGCCCGACACCGC  61 463
   Dshi_3297 NONE
        xseB 3462791 .. 3462818 -  -8.4  -3.53012   TTGGGCCGCTGCAAA        CCCCGACAAGGCT CAG AGCC-CGTCGGCG        GGCTTCACGCCCGTG  63 10
        ispA 3461909 .. 3461919 -  -2.4  -2.52623   GGTCGCTCATAACAG                 GGCC TCC GGTC                 AGCCTCAGGTGTCGC  37 30
        dxs1 NONE
   Dshi_3293 NONE
   Dshi_3292 3458113 .. 3458126 -  -3.8   -3.7732   TGCCGAGAGCAAGAA               GGTC CGCAAC GACC                GCATCAAGGACGAGC  57 153
         amn 3455303 .. 3455315 -  -6.3   -3.5936   GCGAAAGCGGTTAAA                GAAAC GCG GTTTC                CTCGAAACTGCGCAG  59 8
         hup 3454207 .. 3454229 - -12.6  -5.40072   GCTTTCGCAAAAAAA           GGGGCCGCCG GAG CGGCGACCCT           CTCGTTCAGTCAGAC 100 50
   Dshi_3287 3453270 .. 3453280 -  -6.8  -2.83343   ACACGGACTATCACA                 GCTG CGT CAGC                 GCGCCCGCGACAGCT  50 21
        ccdA NONE
         trx 3452020 .. 3452042 -  -6.8  -3.73775   CGGAGGCGCAGGAAA           TCGCCCCAGG CAC CCCGGTGCGC           TATCTGCCCTATGCC  61 55
   Dshi_3281 3445057 .. 3445092 -   -11  -3.85698   CGGTGGGGCCACAAA    TGCCGAAGGGGCGCCC ACCC GGACGCCCCTTCCCCG     TCAGGCCCGCCGGAT  79 40
   Dshi_3280 3444685 .. 3444703 -  -4.5  -2.82635   AGTTCCATCATCAGA            CGCG-CCG CAAC CGGACACG             CCCGAGCACGCTGGC  42 2
   Dshi_3279 3443921 .. 3443935 -  -2.1  -2.69799   CGAGGGGACATAGGA              GCG-CA GTTT TGTCGC               AGGGGGCTTGTTTGC  39 159
        petA NONE
        petB NONE
        petC 3441014 .. 3441034 - -19.7  -5.27938   AGCGGCAAAGAAAAA            CGCGCCCCG ATC CGGGGCGCG            CTCCATCCGTTTCAC 100 51
        aroC 3439277 .. 3439302 -  -2.5  -3.28712   GGGTGCGGCCGACAA         GGCCCTGCCCCA TCT CGAAG-AAGGCC         TGGCCCTGGCACGGA  44 462
   Dshi_3272 NONE
   Dshi_3271 NONE
   Dshi_3270 3435090 .. 3435106 -  -3.5  -2.90496   CCCCGCGCCAAACTA              GCATCGC GGG GCGGGGC              CGCAAGCGCGGGATC  42 39
   Dshi_3269 3433830 .. 3433855 -  -7.5  -3.25823   CCGGGTCGAGATGAA         GGCGGTGGAGA CGGT TCTGCACCTCC          GCCGGGCGCACCCGA  56 129
       fliL2 NONE
   Dshi_3262 3428387 .. 3428402 -  -3.9  -2.64099   CCGGGCCATCACAAG              GCCCC CCCAAC AGGGC               GTCGCGTGCGCCACT  41 3
   Dshi_3261 3427750 .. 3427774 -  -6.3  -3.37344   CTTTCAGGTAAGCAA          CGCGGAGCG TGGGAGG CGCCCGGCG          TCAATTCGACTCGTC  55 26
        motA 3426832 .. 3426880 - -10.9  -2.71681   CAAGCCCGGCAACCA GCAGCGCAAGCGGAAGGGCGC GGATCAT GCGGCCTCCTGCTTGAGTTGC TTGAGCGCCTCTTCG  63 1
   Dshi_3259 NONE
        flhA 3422901 .. 3422912 -  -3.6  -2.62983   GTCACGCGGAGACCA                CCCC GACC AGGG                 AGGGCCGGTTGGTTT  39 0
        fliR NONE
        flhB 3420905 .. 3420949 -  -4.9  -3.04144   GGCGGAGCGGCAAGA CGGGTGCGCAGGCCCGCGATC TCCTC GGTCA-GGGCCTGC-CGCGCG GCCAGGAGCGGATGC  47 108
        fliI 3414645 .. 3414677 -  -5.4  -3.01712   GCGGGCCGGGGAAGA     TCCCCG-GCCTACCG GTCG CGACGGGCGCGGGGC      TAGATCGCACCCGGG  47 25
        lpcC 3409161 .. 3409179 - -12.4  -2.57683   ACATTGTCTGACAAT             CCTGCCGC AGC GCAGCAGG             CCGCCCGGCGCGCGG  65 47
         asd 3407625 .. 3407683 - -18.3  -2.86093   CGAAACCGAAAACAC GCGAAGA-CGCCCACAAGGGCG-GATGAG CGG CTCCTCGCACCCTTGCGGGTGCTCCTCGC CAATGACCTTGCCGA  86 303
   Dshi_3235 3404665 .. 3404685 -  -8.1  -3.14878   CCGCGCAACGGAACA            TCGCGCCGC CAT GCCGCGCGC            GCCGATCCTGTCGCG  58 178
       pepA2 NONE
   Dshi_3233 3401925 .. 3401939 -  -4.2  -3.92373   TACCGGATCGAGAAA               CGCC CCAAACT GGCG               AACCGGCAGGGCATG  59 146
   Dshi_3227 NONE
   Dshi_3226 3395720 .. 3395734 -  -3.4  -3.04398   GGCGCGCTTCAAAAC               GCCGCG TCG CGCACC               AGGACCGTCACCGAG  43 4
   Dshi_3225 3394101 .. 3394111 -  -3.2  -3.49475   GGCATGGTCACAGAA                 CATG GGC CACG                 ACGACGTTCTCACCA  49 148
        cas3 3381044 .. 3381069 -  -2.5   -3.6311   GAAAAAAAATGAAGA         GGCGACCCACGA GCT TCACGC-TCGCC         GGCTCATTTTTCGTC  49 488
   Dshi_3212 NONE
   Dshi_3211 3376991 .. 3377014 -  -7.5  -3.52073   GCTCGAAGAGGACAA          TCGGATCTCG TGGAC CGAGA-CCGA          CCCGGATGGCACCCA  60 384
   Dshi_3209 3374385 .. 3374403 -  -2.3  -3.55444   TGCGGACCGCCTAAA             CCCCCTG CCCGT CAGGACG             CAGCGCGGTCTCGAT  49 2
   Dshi_3206 3370124 .. 3370138 -  -7.8  -4.14739   GGACGCATCTCAAAA               CGCTGG TGA CCAACG               ACGACGGCCGTACCG  69 249
   Dshi_3204 NONE
        allA NONE
        uraA 3366433 .. 3366455 - -16.3  -4.66938   ACCCGCAACAGAAAA           GGCCCGGTC GATGT GACCGGGCC           TTTTGCGTTGCTGTG 100 53
       hemA3 3353133 .. 3353170 -  -3.3  -3.91144   TTGAGATGCGATAAA   GCCATG-GCCCTACTTGC GCA GCACGCAGCGCTCAAAGC   TACATGCTTAATCGT  56 72
   Dshi_3189 3351911 .. 3351939 -  -8.7  -3.85698   CTTTCTCGTGATAAA        GGGCAGCGAGTTC GCG GATCTCGCGGCGC        TGGGGCTGTCGACCG  68 513
        nirS 3341732 .. 3341762 - -21.9  -3.32294   TGAAATTCTGGAGAA       GGACCCCGGAGGC GCGGA GCCCCCGGGGTCC       AGGACGGCGTCAGTA 100 35
        nirE NONE
        nirC NONE
        nirF NONE
        nirD NONE
        nirG NONE
        nirH NONE
        nirJ NONE
        nirN NONE
       cbiX1 NONE
   Dshi_3170 3333480 .. 3333499 -  -3.4  -3.62522   GAAGGTGTTCAACAA            GTGCAAGG CCTG CCATGCTC             TTGGCGCCGATGCCA  53 305
        napF NONE
        napD NONE
        napA NONE
        napG NONE
        napH NONE
        napB 3326502 .. 3326517 -  -6.1  -3.05384   TCTCGCCTCAGCGAA              CCGTC GGGGAG GACGG               CTCGAACAGGTTTTC  49 2
        napC NONE
   Dshi_3160 3325140 .. 3325176 -  -2.7  -3.71848   CTCGGTCACCAAGAA    CGCGGTGTCCCTGGGCG AGG CGGCGAAGGCCACGGTG    CCCTATTGGCTGATT  53 297
        ddpX NONE
   Dshi_3148 3314600 .. 3314625 -  -3.1  -2.62983   GGGAGCGGGACATGA         TCGCCGCGCTGG AGG CC-GTGCGACGC         TACGAGATGGAGGGC  39 100
       ugpB3 NONE
       ugpA3 NONE
       ugpE2 NONE
       ugpC3 NONE
   Dshi_3140 NONE
   Dshi_3139 NONE
   Dshi_3138 NONE
   Dshi_3137 3303675 .. 3303693 -  -6.7  -3.06492   CGACCTATGTCAACA            CGC-TGGC CCGC GCCACGCG             CCACCCGATCACCCT  51 502
   Dshi_3123 3290308 .. 3290341 - -11.7  -3.54935   TAAAGTCGTTTGAAA     CGGGGCG-GGCGGG TTATGCT CCCGCCTCACCCCA     AGGTCATGCGCCCGG  75 43
   Dshi_3122 NONE
   Dshi_3121 NONE
       yfdW2 3287097 .. 3287109 -  -4.7  -2.62735   ACATCGCTCATATCA                CGCCC TCC GCGCG                CAAGGCTGCTATCTC  43 5
       gltA1 3286237 .. 3286250 -  -9.5  -3.28712   GGCCGCGCTGCACAA               GGCCC TGCC GGGCC                TGCGCCCCCACCGCG  61 103
   Dshi_3110 NONE
   Dshi_3109 3274523 .. 3274536 -  -3.7  -3.06183   CCCAGCTGCAGTTAA               CCCGC TATT GCTGG                AGGATTTCACCCCGC  45 16
        rluA 3272089 .. 3272103 -  -7.8  -3.93166   CGTTCAAAAAATTAA               CTGCCA TCA CGGCAG               GCGATTCAACCTATA  68 176
        pgsA NONE
        moaD NONE
        moaE 3270274 .. 3270291 -  -8.4  -3.63991   CACGAGGCCGAAGAA             GAGCGC GACCAG GCGCTC              GTGCTGCTGGAAGAG  65 186
   Dshi_3099 NONE
   Dshi_3098 NONE
         gsh 3264355 .. 3264399 -  -7.6  -3.62224   AGACCGGGGCAACAA CCGCTTC-GGCCCGCCGCGGG GCGG CGCGCGCCCGGCCCGCAGCCG GTTCGCGCGTCCGGA  60 142
        udgA NONE
        moaB 3258398 .. 3258412 -  -2.7  -3.72576   GCGTGGTCGAGCAAA               GGGTC GAGGT GCCCC               AGCAGACAGCCGATG  53 301
   Dshi_3084 3253472 .. 3253491 -  -2.9  -3.17392   CACGCCGGAATTGAA            GTT-CAGC GATCT GCTGGAAC            AGTTGCAGATCTCGC  44 481
   Dshi_3082 3252285 .. 3252333 - -17.4  -4.18506   TGAGCCTCAAAACAA CCG-CGCCGCTGGCAGGCCGGACC GCA GGTCCGGCCC-CCGGCGACGACCG AAGGTCGGCGCAACA 100 74
        ydiS NONE
   Dshi_3074 NONE
        ispE 3239668 .. 3239688 -  -3.8  -3.01712   TGGTGCGGGGCAAGA            CCGCGGCG CTGTT CTCGGCGG            CCACCGAGGTGGGCG  44 461
   Dshi_3071 NONE
   Dshi_3070 NONE
   Dshi_3069 3237767 .. 3237795 - -14.6  -3.53012   GGGTCGGTCGGGAAA        CTGCGGCCCGGT GCTGG ACCGAACCGCAG        GCTAAGGGGGAAGGG  83 41
         tag 3232504 .. 3232519 -  -6.8  -3.26471   GTACCGCGACATCAA              GCAGGGC ATC GCCC-GC              GAGATGGAGGTGCCG  54 163
        argH NONE
   Dshi_3061 3230363 .. 3230376 -  -5.2  -2.62184   GCTCCCGGTAGATCA               CGCC AGCCTG GGCG                CTGCCGGACACGGTC  43 141
   Dshi_3060 3229977 .. 3230002 -  -5.5  -4.07568   GGGCCGGGCGCAAAA         TCCTTGAGAAA GGAT TTTGCCAAGGA          TCTTACTCAAGATCC  65 28
        lysA NONE
   Dshi_3058 3225715 .. 3225744 -  -4.8   -2.5742   TGCAAAGATGAAGAG       GGCGCGCGCTGC CGTGGC GCAGGGCGGGGC        GATGCGGGGCGGCTG  43 224
        ftsE NONE
   Dshi_3055 NONE
   Dshi_3054 3222261 .. 3222288 -    -4  -3.56594   TCAAACCCTGTGAAA        GCCGTCACTGCCC CCG GCGCCATG-CGGC        GCCTCCCCCGGGATA  53 164
   Dshi_3053 3221078 .. 3221104 -  -2.9  -3.34398   CGCCCTGGTGAAAGA        GCGCGAC-CAGC CCCG GCCATGTCCCGC         GCCGTGGTCAGCACC  46 354
   Dshi_3052 NONE
   Dshi_3051 3219735 .. 3219760 -  -4.7    -4.183   TGAACCCGGAAGAAA         CCCCAAGAACC CGGA AGTTCTTGGAT          GGGAGGGGGCGGTTG  65 46
       citE2 3218529 .. 3218562 -  -7.9  -3.21276   TGTCGCCCGACAAGA     CGCCGACCGGGCCTG AAAC CCGGCTCAGCCGCCG      ATCAGTTCGGACTGC  56 16
   Dshi_3049 3217212 .. 3217235 -   -16  -3.05596   GAGGCGCTGACCGAA          GGCGCGC-CGG AGG CCGCGCGCGCC          GCCATGCACGCCCAT  77 155
        glxR 3215579 .. 3215589 -  -2.4  -2.78816   GGATCGGCGATCATA                 CGTC CTG GCCG                 TCCATCTTGCGGAAC  39 10
        ttuD 3214114 .. 3214128 -  -4.2  -3.85698   TCCTTCGGCCAGAAA               GTTGCC GAA GGCAAA               TGGGCCAGTGCGGCC  57 227
        dapB 3209119 .. 3209143 -  -4.1  -2.72043   AACGCCTCGGGAAAT          GCGCCGTTTGC GTG GCGAACGGACC          CGCCGGGCCGCGCCC  42 45
   Dshi_3039 3208627 .. 3208637 -  -8.2  -3.09933   GCTGAACGGACTGAA                 GGCC TGA GGCC                 TATTCCGGCGCGCCG  57 25
   Dshi_3037 NONE
   Dshi_3036 NONE
   Dshi_3035 3202854 .. 3202886 - -10.5  -4.84359   GGATTGGGAGAAAAA      GGGCATCGCGATC GATTTCT GATCGCGCAGCCC      GTCGGGATCAGTCGA 100 33
       rsmB1 NONE
   Dshi_3032 3199144 .. 3199162 - -11.6   -3.1247   ATGGGGCAGAGTCAA             CGCGCTGC GTC GCGGCGCG             TGAATCCCGTAACAA  70 292
        atpI NONE
       atpB1 NONE
       atpE2 3197664 .. 3197692 - -13.2  -2.52464   TTGGCCCTCAATCCA        TCGGATCAGCCC GTTTG AGGCTGACCCGA        CCGTAAGGATGGCTT  67 49
        atpX NONE
       atpF2 3196505 .. 3196522 -  -9.8  -5.27779   CCGAACAGCAAAAAA             CCCGGC ACGGAG GCCGGG              TTTTCCACGTGGTTC 100 52
         nth NONE
   Dshi_3022 3192268 .. 3192304 -  -8.9  -3.30124   GCCGAGTGCCCACAA  CCGGGCGCCCAAGCGGTT TCGA AACCGCTTG--C-CCCGG   CACCGTCCCTAGAGC  60 34
   Dshi_3019 NONE
   Dshi_3018 3188274 .. 3188292 -  -6.6  -4.57569   TCATCTTTGGAAAAA             TACTCCGG GGT CCGGGGCA             GCGCCCGGTTCCTCG  78 60
   Dshi_3014 3182545 .. 3182559 -  -8.5  -3.14564   GCAGGCGCCGATCAA               CGCGC AGCTG GCGCG               GGCCTCCGGGGACCC  56 390
   Dshi_3012 3181562 .. 3181575 -  -3.1  -2.61264   CTTTGCAGTCAGAAT               GTCGCA GGC TGCG-C               GCGCAGTTCAAGCGC  39 59
   Dshi_3011 NONE
   Dshi_3010 NONE
   Dshi_3009 NONE
   Dshi_3008 NONE
        ybgG 3172611 .. 3172621 -  -2.4  -4.24342   CCCGGGATCAACAAA                 TGCG CCA CGCT                 CCTTCTTCCCGAAAT  59 74
         rpe 3171443 .. 3171465 -  -5.4  -3.73072   AAGTGGCGGAGTAAA           CCCACCCCTG TCG CAGCGTCGGG           ACTTCAAAACCGGCG  58 418
       dctP4 3169665 .. 3169676 -  -2.2  -2.71712   GCGCCGCCCCGAAAG                GATC ACTC GACC                 GCGAGGGCCTTGTCC  39 16
       dctQ4 NONE
       dctM2 NONE
         mcd NONE
       fadD1 3164833 .. 3164861 - -15.3  -3.32022   TGCGCCAGATATTAA       CGC-CCGGGCCC TGAAAG GGGCCCGGAGCG        CCGACAAATTTTTTC  84 122
   Dshi_2996 NONE
   Dshi_2995 3158123 .. 3158158 -  -3.9  -5.06816   ACCGCCGAAGAAAAA    GCCCGCC-TGATCAAG GAATA CGCGACCAAGGAGGGC    GACACCGGCTCCCCC  81 334
   Dshi_2993 3156959 .. 3156973 -  -4.2  -3.03124   CGGCAGGGCGCAAGA               TTAGCG CGC CGCTGA               TGTTCCTCTGGGCCA  44 195
   Dshi_2989 3154071 .. 3154097 -  -9.5  -2.52543   ACTGCGGTCAAGCTA        GCGGCCAGGTCT GAAC AGACCTAGCC-C         TCTTGCGTGGCAAAC  56 287
   Dshi_2986 3152178 .. 3152192 -    -7  -2.80113   CATGAGCGCATCAGA               CCCCCG CCC CGGGGC               CAGGTCAATCCTTGA  49 30
   Dshi_2985 3151031 .. 3151045 -  -7.2  -3.84246   GCTCCAATTATTAAA               GCTAAT TGA ATTAGC               CTCGGCCAAGACATT  68 486
       rpoH2 3145167 .. 3145193 - -16.6  -3.32022   GTCCTCAGACAGCAA         CTCGCCCGCC GGGAGGG GGCGGGCGAG         CAGGAGGAGAGCCGG  88 46
   Dshi_2977 3144407 .. 3144434 -  -6.8  -3.17194   AGGCCCGGAACTCAA        CTGCGCGCTACC GGAA GGCCGCGCACGG         ATCGTCGCGCTCTGT  53 5
       coaBC NONE
         dut 3142674 .. 3142686 -  -4.1  -4.21438   CAGGGCAAGAAAGAA                GACGA AAA TCATC                GCGCTACCCCCGCCC  63 29
        moeB 3141652 .. 3141668 -  -9.4  -2.87211   ATCCTGGCTCAGATA              TGCCCG CAGAC CGGGCA              GTCGGCGCGGCGCTT  58 2
         dcp NONE
   Dshi_2972 3138452 .. 3138466 -  -5.6  -3.18264   GGCTGGATGCAGGAA               GCCCAA CTC TGGGGC               GTGACCCACACCCCG  49 76
        gyaR 3136761 .. 3136777 -  -5.7  -2.70232   TCCAACAGGACATGA              CCCGGCC GCA GGCCGCA              CACCTTGATCACGAT  46 58
   Dshi_2969 3136264 .. 3136286 -  -6.9  -3.53012   GCGTGCTGGTCGAAA           GCGCGACGC CCGAC GCGTCAAGC           CTGCGTCACATGGAC  58 125
        panB 3131915 .. 3131944 -  -6.9  -2.70932   GGTGTTCCCGAACCA       CGCCGGAGCAGGG CGCG CACCGCGCGGGCG        CAGCAGCGAACCTCA  49 38
   Dshi_2965 3131533 .. 3131555 - -13.4  -3.91196   CCCAGACACACGAAA           CCCACCGTCA CCC CGACGGCGGG           TTTTTTTATGCAACG  86 64
        dnaE 3117761 .. 3117790 - -14.3  -4.22214   ACCCACCGAAAACAA       GAATGCCCCGCCC TGTC GGACGAGGCATCC        CTCAAGTCACGGCCA 100 207
        hisS NONE
        hisZ NONE
        hisG NONE
        panC NONE
   Dshi_2951 3112034 .. 3112052 -  -4.5  -3.05844   GGCCCGATTTCAAGA             CCGACCT GCCGT AGCTCGG             CCTGCGCTGCCTGTG  45 110
   Dshi_2949 3108746 .. 3108762 -  -7.9  -3.14211   AGTTTTCGGGATGAA              GATCGCG TCG CGCGCTC              CACCCGGGGGTCGGT  56 292
        rpsD 3108005 .. 3108029 -   -20  -4.13767   TGGCGGACGCGAAAA          GGGCCGCGCG GGGGT CGCGCGGCCC          TTGAGGCAAGTATGC 100 50
         hss 3106525 .. 3106535 -    -4  -3.53761   CAAGTGTCGGGCAAA                 TTGT CTG ACAA                 TCCGCTCCCTCCTAC  51 37
        hisC 3105379 .. 3105392 -  -5.2  -2.62184   CCTTCGGGTAGATCA               CGGC GCTCAT GCCG                CCTGCGCCTTGAAGG  43 18
        tyrC NONE
   Dshi_2944 3103335 .. 3103386 - -13.4  -2.72661   CATCACCCTCAACGA GGCGCGCGCGGCCTGGGGCCCGCTG GGC CTGCGGGCGGCGGGC-GCGCTCGAC ATCGACGCGCAAGGC  67 274
   Dshi_2942 3102001 .. 3102017 -  -4.4  -3.55444   GGGCGATGTTGCAAA             GTGC-GC GTTT GCTGCAC              CGCCAAGAGCGGCTC  53 39
   Dshi_2941 NONE
   Dshi_2940 3098682 .. 3098703 - -14.4   -3.5882   CACAGCACCCTTAAA           CGCCCGGC CCCCGC GCCGGGCG            TTTTCATTTCTCGGT  85 29
   Dshi_2938 3095045 .. 3095066 -  -2.9  -3.55444   TTGGTATTGCCGAAA           CCGGCGA GCATGCTA TCGCCGC            AAGGGTGAATCGGCT  51 63
        atpH NONE
       atpA1 NONE
       atpG2 NONE
       atpD2 NONE
       atpC1 3089943 .. 3089960 - -14.1   -5.3798   GAAGAACAAGAAAAA             GCCCCGC CGAA GCGGGGC              CCTGTCATCTTGCTG 100 51
   Dshi_2932 3089018 .. 3089040 -  -5.5  -3.28791   AGGCCGGCTGGACAA          CGTCACGGTG GTCT CGCCG-GACG           TGGGCGGCGTGGCCC  51 514
   Dshi_2930 3087768 .. 3087787 -  -3.5  -2.78384   GTGGCGGGCATCAGA            GGCGC-CC GTCGA GATGCGCC            TCCAGATCATCGAGC  40 1
   Dshi_2929 3086533 .. 3086548 -  -3.2  -3.53444   CGAGGTTCTGGGAAA              CCGTGCC TTT GGC-CGA              TATGACAACGGCGGA  49 407
   Dshi_2922 3080391 .. 3080408 -  -2.6  -4.61231   CGAGACCGCGAAAAA             GAGCTG CTTTTC CTGCTC              GGTGCTGCTGGCGGG  70 176
   Dshi_2920 NONE
       groEL 3077133 .. 3077150 - -14.1  -5.14563   GCGCGCATGAAAAAA             GGGGCCC CGAA GGGCCCC              TTCCATCCGGAATGT 100 49
   Dshi_2918 NONE
   Dshi_2917 3075125 .. 3075158 - -15.3  -3.30007   AAGACGGCGTCACAA     CGCCCCAG-CCGGACC GCA GGTCCGGCCTCAGGCG     ACGCCCGCAGGGCGG  84 194
   Dshi_2916 3073960 .. 3073970 -  -8.2  -3.79519   AAGTGCACGAGGAAA                 CCGG GCT CCGG                 ATCGCCGTGGGCGCC  68 283
   Dshi_2914 3072926 .. 3072939 -  -5.3  -4.07687   AGGGTCTTGGTAAAA               TCCTT CGTC AAGGA                TTTTACTCGCCCAGG  63 28
   Dshi_2912 NONE
   Dshi_2911 3070876 .. 3070888 -  -3.3  -3.72576   CCGCGCTTGACCAAA                CGGCA ATC TGCCC                TCAGCGCAGGTGCAG  54 26
   Dshi_2910 NONE
        polA 3067276 .. 3067297 - -11.5  -3.53761   CAACGGCTTTCGAAA           GCCGTTGGC CCGC GCCACCGGC            GCCCTAATGCGCCTC  71 29
        rluE 3066308 .. 3066318 -  -8.2  -3.28712   CGCGGGCCCCGACAA                 CCCG ATC CGGG                 TCACGCGCCACCCCG  58 289
   Dshi_2906 NONE
   Dshi_2905 NONE
   Dshi_2904 NONE
   Dshi_2903 3058648 .. 3058678 -  -3.1  -2.72144   TCAGTTGCGTGAAAG      CCGCGC-TGGCGCA TTCG TGAGCCCCGCGCGC       TCCGACCTGTGGCAG  40 440
   Dshi_2901 3056351 .. 3056376 - -16.2  -3.18832   GAACCCCAGAACAGA         CAGGGCCCAC AGGAGG GTGGGCCCTG          ACGGGTCGATCCATT  86 55
        pucB NONE
   Dshi_2899 NONE
       pucC1 NONE
   Dshi_2897 3053249 .. 3053266 - -10.5  -4.27316   CCCCGGAACGCAAAA             GACCCGC CGAA GCGGGCC              TTTACACGATGGCGC  85 46
   Dshi_2896 NONE
   Dshi_2895 NONE
   Dshi_2894 3049143 .. 3049155 -  -3.3   -2.5955   ATGGGGCAGAACTCA                GGCAG CCT CCACC                GTACCCAGCCCAGCA  39 10
   Dshi_2893 3048184 .. 3048210 -  -2.9  -3.53811   GCGACCCCTGTCAAA        TCGCCGGAC-CC GTGT GGCGTCCGACAT         CCGGAATGTGGGAAG  51 73
   Dshi_2892 3047613 .. 3047634 - -15.1  -4.35926   AGGCGAAACGCAAAA           CGGGCGCGC TTGC GCACGCCCG            TCACGAGGTCGGTAA 100 51
        fabG NONE
   Dshi_2890 NONE
   Dshi_2889 3045089 .. 3045104 -  -3.9  -2.62616   CGATCCCCGAGATCA              CCGCA TCGGTG CGCGG               CGCGATCGCGTTGGC  40 452
        gabD 3043152 .. 3043167 - -10.4  -3.14132   GGGCGCCTCGACCAA              GCCGCT TGCA AGCGGC               TTAAGCCCGTTCCAA  64 66
   Dshi_2874 NONE
   Dshi_2873 3027525 .. 3027537 -  -6.2  -3.07816   GTCTTATGCAGGGAA                CGGC CAGAC GCCG                AGCCAGGCATGGATG  49 1
   Dshi_2872 NONE
   Dshi_2871 3025986 .. 3026011 -  -5.4  -3.85698   GCCGGGGCCGAGAAA         GCGCCCGGC GGCCCTTGT GCCGGG-GC         CCGCAGCCCCCATGT  60 280
   Dshi_2867 NONE
   Dshi_2866 3023502 .. 3023518 -  -2.1  -3.35278   GTAAGCAGACATCAA              GTGCTCC CTG GGGTCAC              AGCGCGAGGCGGGCA  45 22
        sdhA 3021578 .. 3021631 - -10.2  -2.80464   CCATCAAGTCGAAAG GTGCATGTG-GCGCAGCTCGGAGGA TTTCT CCCACAGGGCTGCGCTCACACGCAT GGCGACACCGGACAG  60 90
   Dshi_2864 NONE
   Dshi_2863 NONE
   Dshi_2862 NONE
        sdhB 3018268 .. 3018284 - -15.1  -4.19238   CCCGGAACGCGAAAA              CGGGGCC ATT GGCCCCG              TTTCCCTTACACGCG 100 55
   Dshi_2860 3018008 .. 3018020 -  -4.7  -3.01712   GCTGGTCGGTGAACA                TCGCC ACC GGCGC                CGCCACGCGCCTGCG  47 41
   Dshi_2856 3015638 .. 3015675 -  -9.2  -3.57462   GACGCGATTTGCAAA  TCGCGTGACCAAGCCCGT TCGA ACGGGCTTG-CC-CGCGG   CTCAGTGGGACAGGA  68 27
   Dshi_2854 3011832 .. 3011868 -  -2.9  -3.72576   GGGGCCTCCAGGAAA    CAGAGTTGGTATTCCGC AGC GCAGAATCGCAATGCTG    CGGCGCTTTTGAGGG  54 95
   Dshi_2853 3010470 .. 3010498 - -14.6  -4.00042   TGGGCCATGAAAGAA        GGCTCGCAGCAC CTTCC GTGCCACGAGCC        TTTCATTGATTCGTT  93 50
   Dshi_2852 3009332 .. 3009360 -  -2.9  -3.88498   TCGGCATAGACGAAA        CGGATCATGGGGG CGG CCCTCTTGTTGCG        AAAACGAGAGGAAGA  56 107
   Dshi_2851 NONE
   Dshi_2850 NONE
   Dshi_2849 3006070 .. 3006108 -  -8.7  -2.55015   ACCTGACCGAAGGCA   GCTACCGCACCCGGATC TTCCT GACCCGGGACCGGCAGG   TGATCGATGCCTTCG  52 323
   Dshi_2835 2993389 .. 2993447 -  -7.9  -2.71712   GGGCCCCCGCCAAAC CGCATCGCGCAGCGCCACGACAGCGAGC GCAA GCGCATCGTCGTAGCGAGGAGCG-CGCG CAAGCGCATTATCGT  52 126
   Dshi_2831 2986703 .. 2986714 -  -2.2  -3.05844   GTCTGGACGGCAATA                GTCA TGCG CGAC                 AGTGTGGGGGCAAGA  41 43
   Dshi_2830 NONE
        gshB 2985040 .. 2985052 -  -6.2  -2.87132   CGGTTCGCCGAGACA                CCCG ACATG CGGG                TCAATGGCGACATGG  48 252
   Dshi_2823 2978744 .. 2978754 -  -6.8  -3.06696   GCGCGCTGCAAGACA                 GCTG GGC CAGC                 TTCCTGGCCAGTGGG  51 369
   Dshi_2819 2975735 .. 2975758 - -13.8  -2.91264   CTGCGCAGGGAGAGA          GGCGCGCCAC GTCC GTGGCGAGCC           GAGACGCGTGTGCCG  74 282
   Dshi_2818 2974847 .. 2974898 -  -2.1  -3.05715   AACGGCGGGACGGAA CGGG-GTGCGGGCCTGTCTGCGACGC GGA GCGTCGGTTTC-GGC-CGCAGACCCG GCCGGGCGGGCCTAG  41 37
   Dshi_2817 NONE
   Dshi_2816 2971389 .. 2971423 -  -6.5  -3.73072   AATCCGTGCATGAAA    TGACTCCTTGCGCGCCA TCC TAG-GCGCA-GGAGTCT    TAACAAAGCGCCAAG  62 88
   Dshi_2815 NONE
   Dshi_2814 NONE
   Dshi_2809 NONE
   Dshi_2808 2965903 .. 2965921 -  -7.6  -3.07994   TGCAACGGTATGCAA             CAAAAAAT TCA ATTTTTTG             CATATGTCGCATTGC  54 62
   Dshi_2807 NONE
   Dshi_2806 NONE
   Dshi_2805 2964527 .. 2964553 - -16.5  -3.85698   GTTTCCTCCCAGAAA         GGCGCGGCCGG GGGGT CCGGCCGCGCG         GGCCTTCAGCTGACG  95 31
       soxA1 NONE
   Dshi_2803 2961789 .. 2961805 -  -3.7  -2.93623   CTCCCGAAAACATGA              TCGGAAT GAT ATTCAGA              TGTTTGAATAAGTAA  44 46
   Dshi_2802 NONE
   Dshi_2801 NONE
   Dshi_2800 NONE
        fccB 2957417 .. 2957457 - -16.2  -3.57462   GACGCGATTTGCAAA TCGCG-TGACCAAGCCCGT TCGA ACGGGCTTGGTCGCCGCGG  CGGCCGTCAGCCGAA  91 32
   Dshi_2796 2955245 .. 2955259 -  -4.2  -3.56325   GGCCTACAAGTACAA               CGGCAA GAG CTACCG               TTTCGTGGTCAACGG  51 165
   Dshi_2789 2948046 .. 2948087 -  -8.6  -2.71712   GGTGGGGCCGGAAAG GTTAACGGC-CGCCGGTCC GGAAG GGTCCGGCGCGCCGACAAG TTTTTTCGCAAAACC  54 134
   Dshi_2787 NONE
        gatC NONE
        gatA 2944777 .. 2944787 -  -3.2  -3.57144   CCGCGCATTTCCAAA                 GACC TCT GATC                 AGCGTTCGTGCCAGC  51 41
   Dshi_2784 2944095 .. 2944148 -  -9.3  -2.52464   TCGCGGTGTAATGCA GCACCACCAGCCGCGGCACCGCCCCG TCC CGGCGCGGC-CCGCAATTGGGCGAGC GTTGCTCGGCAATGG  56 44
   Dshi_2783 2943047 .. 2943061 -  -4.2  -4.67608   GAGTGTAACACAAAA               CTGACA GTT TGACAG               TCTAAAAAAGTTTAC  75 439
   Dshi_2782 2942403 .. 2942431 -  -4.4  -2.57132   GTCTCCTGGCAGAAT       GGGCGGGCGAGAG TCGT CCCACGACC-CCC        GAACAGATTGAACCC  41 108
        rpmG 2942165 .. 2942183 - -13.1  -3.76413   CCCGAAAATGCGAAA             GCCGCGC TCGGG GCGCGGC             TTGTCGGGTCGGATC  81 56
   Dshi_2780 2941371 .. 2941388 - -14.1  -3.91196   GGCAGACACAGGAAA             GCCGGCC CTCG GGCCGGC              TTTTTCGTTGCGCAC  86 51
   Dshi_2777 2939224 .. 2939240 -    -5  -2.79915   AGGCACGCCAGGACA              CGCGCC TCAAC GGCCCG              GCATCACAGCTGCGC  44 29
   Dshi_2775 NONE
   Dshi_2774 NONE
   Dshi_2773 NONE
   Dshi_2772 2934686 .. 2934696 -  -2.4  -4.47307   AAATGAAGAGGAAAA                 CGCC TGG GGAG                 AGGTGCGGCGGCAAC  65 41
   Dshi_2770 NONE
   Dshi_2769 NONE
   Dshi_2768 NONE
   Dshi_2767 NONE
   Dshi_2766 2927436 .. 2927446 -    -4  -2.83309   CAGAATCACGGAAAG                 TGAT GAC ATCA                 ATAAAATCCTGAAAT  44 114
   Dshi_2765 2927037 .. 2927055 -  -4.4  -2.82803   GATCGACACCGAAAC             GCGTCAGG TTG CCCAGCGC             TCTCGCCGCCGCCCC  44 10
   Dshi_2764 NONE
   Dshi_2763 2924841 .. 2924860 - -16.4  -4.43283   GCAGAGAAAGACAAA            GGCCCGGG ACTT CCCGGGCC             TTTCGCATCTCAGAA 100 49
   Dshi_2761 2922183 .. 2922195 -  -3.3  -3.53444   CGAGGCCCTCCTAAA                GCGGC CAG ACCAC                CAGGATCGTCGGGAT  49 8
   Dshi_2760 2921052 .. 2921100 - -12.1  -3.01712   GCCCCGCGGGCAAGA TCGAGGCCCGCGTGCCCGGCCCG GGC CGGTTCTGGCCCGCGGATCTCGG CGCGCCGCCGACACC  67 301
        ssuD NONE
   Dshi_2756 NONE
   Dshi_2755 2916872 .. 2916888 -  -4.3  -3.85698   CGTCTCCGCGAGAAA              CCCGGTC AGT GACCGAC              GAACCGTCCGAACAT  58 14
   Dshi_2754 NONE
   Dshi_2753 NONE
   Dshi_2752 2913774 .. 2913808 - -10.7  -3.51235   GCAGATACAGGATAA    CGCCGAAGGGGCGCACC CGT GGCGCGCCCCC-CG-CA    AACCCTTGACCGGCT  71 41
   Dshi_2751 2913109 .. 2913129 - -14.7  -4.72272   CGCGCCCATGAAAAA            GGGCAGACC CAC GGCCTGCCC            CCCTCAACTTCGCCT 100 344
   Dshi_2749 NONE
        gltX 2909277 .. 2909311 -  -7.9  -2.62184   CGTTTTTCGACACCA    CCGACGGTTG-GGATG CGCC CATCCTCAACGACCGG     GCGGCGCCGATCTAT  50 162
   Dshi_2746 2908463 .. 2908483 -  -3.9   -4.2828   GCGCAGTCACCAAAA            TCGCGTC AGAGCAG GACGCGG            ATGAACAGAAGGTTC  66 10
        purA NONE
   Dshi_2741 2903065 .. 2903086 - -11.5  -3.01712   TGCCTTTCGCGAAGA           CGTGGCGGC CATC GTCGCCACG            GACGCAGCCCCAGAT  65 494
   Dshi_2739 NONE
        rpiA 2899833 .. 2899856 -  -5.9  -3.05384   GCCGTGCCGACCCAA          CCGGCCTGC CTCTTT ACAGGTCGG           AGAATACGTTGCCGG  49 15
         gor NONE
        hflK NONE
        hflC NONE
   Dshi_2734 2896029 .. 2896066 -  -2.5  -4.07687   ACGTCGGTGTGAAAA   GAGTGTTCCACGGCGGGA TCA TCCCGCCAAGGT-CTTTC   CAAGTGCTACGATCA  57 6
        degP 2894329 .. 2894351 - -18.4  -4.99035   CGACCCATAGAAAAA           CGCCCCCGGC AGG ACCGGGGGCG           TCTGTGTCACCTGTC 100 51
   Dshi_2731 NONE
   Dshi_2730 2892639 .. 2892670 -    -5  -3.69323   GGATCACGATCGAAA      CCCGCGGGTTCTCGT AAG ACTGGCACCCG-GGG      TCGGGGCGTGCCACC  58 53
        xseA 2888484 .. 2888506 -  -5.4  -3.39327   GGCGGAGACCTACAA           GCCCGACGGC AGG GTCATCTGGC           GGTTTTCCGGGGAGG  53 318
   Dshi_2725 NONE
   Dshi_2724 NONE
   Dshi_2723 2885023 .. 2885072 - -17.7  -2.87211   ACTCCGGGGGAGACA CGCGCCGCGCGGCGGG-GGCAGCG CCC CCTTGCCGCCCGCAGGGCGGCACG AGGGACCGCGTGCGC  90 100
   Dshi_2716 2877980 .. 2878006 - -20.2  -2.50816   CGCTCAGCCACGAAC         GGCCTGACCCGA AAT CCGGGTCAGGCC         CCGGGCCCCTAGCGC  90 128
         psd NONE
   Dshi_2713 NONE
   Dshi_2712 2874040 .. 2874081 - -14.3  -3.01791   ACCCGGGCTGCAAGA CCCACCCGGGCACGGCAGC GCAA GACACCGTGCCCGGACGCG  GGTTACGCGATGGGT  78 28
       msrB1 2871050 .. 2871068 - -11.6  -3.13899   AAGCCGCGATCAACA             GCGCCGTC TCG GGCGGCGC             CTTCTCGCACGGTCC  66 59
        hemC 2864074 .. 2864088 -  -3.4  -3.75153   TCCCGGCAATCCAAA               GGGACG TCG CGCCGC               AGCGCAGCAATCGGT  54 73
   Dshi_2703 2863521 .. 2863563 - -12.4  -3.90316   ATCGTTGCAAAAATA CTCCGGGGGCGTCGCGTCCG CGA CGGGGGCAGCGCCCCCTGCG GCGGTCAGGCCGCCT  81 30
   Dshi_2693 NONE
   Dshi_2692 2852214 .. 2852228 -  -4.2  -3.53091   ATCTGGGCCTGGAAA               CGGC CAGCGAT GCCG               AGGTCTTCACCGAAA  51 79
   Dshi_2690 2850809 .. 2850821 -  -4.8  -2.62184   GCCGGGCTCACATCA                TCGC GGCGG GCGA                GCGTTCGGTGAACAC  43 5
        gap3 2845461 .. 2845512 -  -8.5  -3.35996   CAGGGGCAGGGACAA CGGGCCCCGGGCGGGACGCCT-CGC GCAG GCGCAGGCG-CGCGCTCGGCCACCG GGCCAACGATCTTCG  60 183
   Dshi_2684 2844750 .. 2844764 -    -7  -2.71364   CGACGCGGCGAACCA               TGCGGG CTT CCCGCC               GATCGAGATCGGCCC  48 171
       gcvT2 NONE
        gcvH 2842150 .. 2842166 -  -2.3  -2.71364   GTATTTCCGGAACGA              TAAGG GGCGCGG CCTTA              CCCGATCAAGGCGGC  39 23
        gcvP 2839172 .. 2839186 -  -9.2  -3.03771   CGAGAGCGGCCAAGA               GCCGCC GGA GACGGC               CCTGAAGGCGCCCGG  60 47
   Dshi_2677 2834815 .. 2834843 - -13.2  -3.05384   CGGTTCCTGACCGAA        GCGCTGAAATCG GCGCG CGATTTCCGCGC        CTAGGGCGCGGCGCG  71 26
   Dshi_2671 NONE
   Dshi_2670 2825984 .. 2825997 -  -9.5  -3.41051   CCAGCTCGACGACAA               CGGCC TCGG GGCCG                ACGAGAACCCGGATG  65 219
   Dshi_2663 NONE
   Dshi_2662 NONE
   Dshi_2661 NONE
   Dshi_2660 NONE
       coxL1 2815324 .. 2815343 - -12.8  -2.52464   CTCCCGTTGAAGGGA            GCCCCGCC CGAA GGCAGGGC             CCGTCGCTTACTTGC  67 33
   Dshi_2658 2814461 .. 2814486 - -16.1  -5.07652   GGGCTCAAAAGAAAA         CCCCGCCCGGC GCGC GCCGAACGGGG          GTCTTGTCTGTCGAA 100 53
   Dshi_2657 2813704 .. 2813725 - -15.9  -4.34402   CGGCCCACAGGAAAA           CAGCCTCCC CCCG GGGAGGCTG            TTGTCATTGGCACAC 100 46
        ccpA 2810222 .. 2810276 - -13.6  -3.61894   AACGCGGCGGAATAA CCGCCCCG--CAAG-GCAGCCCGGGCC CGCA GGCCCGGACCGCGCTGGCTCAGGGCAG AACCTCGCCCGTGGG  81 17
   Dshi_2653 2808245 .. 2808271 -  -2.8  -3.35679   GCTGCCGAGGTACAA         CTCGGCGGCGCC CGC GACATCTCCAAG         CCGCTCTCGACTTTC  48 312
   Dshi_2648 2804009 .. 2804025 -  -9.3  -3.58905   AGGGCCGACAGAGAA              CCGCGAC ACA GACGCGG              CTGCGGCCCCGGACA  64 249
   Dshi_2646 NONE
        proC NONE
   Dshi_2644 2801326 .. 2801340 -  -4.9  -2.87051   GTTTCATCAGTAAAG               CCGCC CTCCC AGCGG               AACGTCGAGATCCGG  46 2
   Dshi_2643 2800343 .. 2800354 -    -3  -4.07568   CGCGCCTTGGCAAAA                GAAA GAAG TTTC                 AGCAGCCTGGCATCA  58 38
   Dshi_2642 2799429 .. 2799442 -  -9.5  -2.52543   ACTGGCGGGAAGCCA               CGGGC GACC GCCCG                AGGGGTTAGAGGCGC  56 31
   Dshi_2640 2797521 .. 2797546 -  -6.1  -3.06183   GCGATGCTGACCGAA         CTGGGCCTCGAC ATC GTCGCGACC-AG         AGGGACCGCGGCCTT  49 426
   Dshi_2638 2794105 .. 2794118 -  -5.3  -3.23853   GTGTGTCAATCAACA               TTGAC ACAA GTCAA                GTCAGTCCACGGGAA  48 27
   Dshi_2637 NONE
   Dshi_2636 2791422 .. 2791439 -  -6.3  -2.56914   GACCGCACGAATGCA             CGCG-ACA CCG TGTTCGCG             GGGGCGGACCTGCGC  46 371
   Dshi_2634 2790476 .. 2790486 -  -2.4  -2.72799   GGGCCATACATACGA                 CCGG GCT CTGG                 CTGTCAAGGTCGCGT  39 67
        aspS 2788578 .. 2788588 -  -2.4  -4.11692   GATCGAGGCCGAAAA                 CGTC CAA GGCG                 ACTTGCCGCAAGACT  59 93
   Dshi_2630 NONE
   Dshi_2629 2786689 .. 2786710 -  -2.1  -3.11073   GATTTTACTTAAAAT           CCTTGCACCC GGC GGG-GCCCGG           GGTCACTCCAGCTTC  41 28
   Dshi_2623 2782441 .. 2782452 -  -7.2  -3.84825   TTGAGGCAGATCAAA                CCGG CGCG CCGG                 GTGGCGCACAAAGCG  68 42
   Dshi_2622 NONE
   Dshi_2621 NONE
   Dshi_2620 2781013 .. 2781036 -  -4.5  -3.76373   TTGGGAACACTGAAA          CTGCGACGG AGTGCA CCGTGACAG           AAGCCCTGGCCCCCG  58 358
   Dshi_2617 2778564 .. 2778581 - -10.5  -4.74132   ACACCCCACGAAAAA             GGCGCCC CGAA AGGCGCC              TTCAAGTCCCGCTGG 100 50
   Dshi_2615 NONE
   Dshi_2614 2775937 .. 2775949 -  -4.7  -3.08996   GACCCCTATCCAAGA                GGCGC CTT GCGCG                ATTGTCCATGACGGT  47 479
        npdA 2775043 .. 2775058 -    -9  -3.31144   GCCGGAGCGCGACAA              GCGGTT TCGA AACCGC               TTGGCCCCCGGCGGC  63 176
        rluD NONE
       rpoH2 NONE
   Dshi_2608 2771469 .. 2771484 -  -4.6  -3.94276   AAAACATTGGATAAA              TCGCGA TGTT TCGCGC               GCGAAACCTCCCCTG  60 43
   Dshi_2607 NONE
   Dshi_2606 2770591 .. 2770613 - -14.8  -3.41051   TGACCCGCATGACAA           GACCCGGCGC AGC GCGCAGGGTC           AAGCCCTCAGAGCTT  83 32
   Dshi_2605 2770342 .. 2770352 -  -4.6  -3.07816   CCTTTACTGACCCAA                 GGCC TCC AGCC                 CGGATGTATCCATCC  47 3
   Dshi_2604 2769879 .. 2769908 -  -3.4   -4.7878   TAGGCACAAAAGAAA       TCAGGGGCGCGCC ATGAG GGC-CGCCCCCTC       GGATCCCTCAGGCCG  73 33
   Dshi_2591 2756540 .. 2756551 -  -7.2   -4.3586   TTATCCAGACCAAAA                CGGG AAAT CCCG                 TTAGGTTCGAATTGA  75 495
   Dshi_2586 2751390 .. 2751448 -  -9.4  -2.53263   TCGACCTCGAACGCA GCCCCGAGCATGGCGGCCACGGCCAT CAGGGGC ACGGCCATGGCGGCCACAACATGGGC AACAAGACCAACTGA  56 59
   Dshi_2581 2747807 .. 2747817 -  -2.4  -3.02511   GCCAGGGGCGCAACA                 TCCG CCC CGGC                 CCCCGACCTAGCGCG  41 64
        hrpB 2745038 .. 2745068 -  -5.2  -3.28712   TCCGGGCGCCGACAA       GACCTACCGCTCCA AGA TGGTGCTGGAGGGC       GACCAACTGAAAGTG  51 260
        hisA 2743772 .. 2743790 -  -3.7  -5.41746   AACCCCGCAAAAAAA             CGCGCCA GAGAA CGGCCCG             CTCTTTCCAAAACCC 100 102
        hisF NONE
        hisE 2741164 .. 2741176 -  -6.2  -3.23042   AAGATCGAGTACCAA                CGCC TCTTC GGCG                AGTTGCGGATGGGCG  53 164
   Dshi_2570 NONE
   Dshi_2569 2736404 .. 2736417 -  -5.3  -3.35088   AAACCCTTCAAGCAA               TCGAT CCTC ATCGA                ACGGATCGACGCCGC  51 326
   Dshi_2565 2730270 .. 2730288 -    -8  -5.74122   GACCACACAAAAAAA             GCCTCCCG AAA CAGGCGGC             AGCGGCAGGTGACGG 100 56
   Dshi_2564 NONE
   Dshi_2563 NONE
   Dshi_2562 2726300 .. 2726333 -  -8.8  -3.26649   ACACGCCGACACCAA    GGGCTC-CGCGACCAC GCCT GCGG-CGCGCGCGCCC     GGGAAAGCGGGCGTG  60 94
   Dshi_2561 NONE
   Dshi_2560 2724429 .. 2724459 -  -6.7  -3.54424   TTCCAGCGCGGCAAA       GCCGGTGATCTCG TCCAT CGCGTTCACGGGC       TCACCTCCCGCCACA  59 18
   Dshi_2559 NONE
   Dshi_2558 2722220 .. 2722230 -  -3.2  -2.78032   GTTGCGGGAAAACAT                 GGCT CAG AACC                 CTCCGCCAAAACTGA  40 18
   Dshi_2557 NONE
   Dshi_2556 NONE
   Dshi_2555 NONE
   Dshi_2554 NONE
   Dshi_2553 NONE
   Dshi_2552 NONE
   Dshi_2551 NONE
   Dshi_2550 NONE
   Dshi_2549 NONE
   Dshi_2548 NONE
   Dshi_2547 2703260 .. 2703284 -  -9.2  -2.54896   TCCTGATCGAACCTA         TGGGCGGTCCC GGTC GGG-CCGCCCG          CCCCGCCGTAGTCGA  56 83
   Dshi_2541 2697640 .. 2697650 -  -6.8  -3.66654   GACCCGAACCCGAAA                 GGTG TAG CACC                 GCTTCAGGTGTCTCT  59 29
   Dshi_2538 NONE
   Dshi_2537 NONE
   Dshi_2536 2693837 .. 2693866 -  -2.1  -3.90048   TGCCGCCGAAAAACA       TCGTCAGGAAACTT GAT AAGCCCCCAG-CGA       TCGCGGTCGACCTCC  54 72
   Dshi_2535 2693532 .. 2693580 - -10.4  -2.63631   CGAAGGTTCACACCA CCCACCC-GATCAGCGAGATCACC GCG GCCAATCCCG-TGATCCGGGCGGG GTCCTGGAACCTTGA  59 103
   Dshi_2534 2693045 .. 2693061 -  -5.7  -3.91072   GTAAAGTGTCAGAAA              CCCGAAG GTG CCGCGGG              CGTGGCGTAGACCAC  62 2
   Dshi_2533 2692551 .. 2692565 -  -3.4  -3.15544   TGCCAGCTGCATCAA               TCGCCA TCG CGGCGG               AGGGCGCAAGTAAGC  44 295
   Dshi_2532 2692164 .. 2692184 -  -2.3  -3.03441   GATGATTGGCCAAGA            GCTTGGCCG GAC CCGCCCTGC            ACGGCCCCAGTCACG  41 36
   Dshi_2531 2691622 .. 2691632 -  -2.4  -3.53444   TGACTTCCTCGCAAA                 GCGC CCA GCTC                 GCGGCTTGCAGGAAA  47 46
   Dshi_2530 2691217 .. 2691233 -  -6.5   -2.8294   CATCCCCCATAACGA              CGGTGAC ATC GTCACCC              ACCTTGGCAGATCCG  50 151
   Dshi_2529 NONE
   Dshi_2528 NONE
   Dshi_2527 2688737 .. 2688755 -  -5.2  -4.08394   AGACCCCGCTCAAAA             CCGACG TTGCGGG CGCCGG             GTCCAGCCCCTTGGC  63 1
   Dshi_2526 NONE
   Dshi_2525 2686427 .. 2686471 -  -4.8  -3.29263   AGACTTTCTGCACAA CGGCC-CCCGCGACATGCAGC GCGA GCAGCAGGTATCGAGCGGCCA CGAGAAACACGATCC  50 161
   Dshi_2524 2685275 .. 2685309 -   -12  -3.53444   CGAGGTGTTTCGAAA     GATCGGTGCATGCCTC AAG GCGGCCCGCGCCGATC     TGCAGAACTCGCCTG  72 74
   Dshi_2522 2683659 .. 2683671 -  -3.3  -2.79796   GCTCAGCCCATCAGA                GCGAC TTG GTCGA                AAAATACCAGTCCTT  40 8
   Dshi_2521 2682881 .. 2682891 -  -8.2  -3.24747   GCGGCACATCACGAA                 CCGG GAG CCGG                 CTATGAGCCGTGGGC  58 26
   Dshi_2520 NONE
   Dshi_2519 NONE
   Dshi_2518 2681708 .. 2681724 -  -4.4  -2.82681   AGAGTAAAGAGATCA             GGT-CGC GGAC GCGGACC              GGCGTGTGGCCGCAG  44 6
   Dshi_2517 2680681 .. 2680715 - -10.1  -3.28791   AGCGCGCCGCCATAA    CCGA-ACGCGGCCAGGA CGA TCCTG-CCGCACGTCGG    CGTGAGCGCGCAGGA  66 102
   Dshi_2515 2678604 .. 2678615 -  -2.2  -3.53811   GCGATCTTCGGGAAA                TGGA CGCG CCCA                 TGGACCGACTCGGCC  49 82
   Dshi_2513 2676954 .. 2676964 -  -8.2  -3.61398   GTGCTGTCCGAAGAA                 GGGC ATC GCCC                 TGAGGCCGGGCTCGG  62 111
   Dshi_2511 2675046 .. 2675069 -  -2.4  -4.27316   GCCGGCAACTGAAAA          TCGCGAAGAC GATT ATCTTTGCAA           GAGGAATTTTCTGTC  62 83
   Dshi_2510 NONE
   Dshi_2509 2673293 .. 2673304 -  -2.2   -3.8448   CAAGAGAGGACCAAA                CCCT GAAC AGAG                 CTAACCTATAAACGC  54 60
   Dshi_2506 NONE
   Dshi_2505 2669996 .. 2670009 -  -2.3  -3.95584   CGGCCACGAACGAAA               CCGAG ATCG CCCAG                GCCCAGACCCTACTC  56 329
   Dshi_2503 2660792 .. 2660831 -  -8.4  -3.01712   CCGCCGGGCGGAAGA  CGTGGTGACCCGCGCG-GC CCT GCGCGCGCCGGTGACCGGG  GTCGTCTCGGCGCTG  55 462
   Dshi_2499 2655119 .. 2655153 - -11.5  -2.78384   GGCGGGGGGACCACA    GCCGCAGCGCCGAGACC GGC GGTGTCGG-GCTG-GGC    CTGTCCATCGCGCGC  62 349
   Dshi_2496 NONE
   Dshi_2495 2651658 .. 2651678 - -16.9  -3.92869   CGAGGTACGCACAAA            GGGCGATGC GTG GCATCGCCC            TGCCCCTTTTTCAAC 100 58
   Dshi_2488 2643615 .. 2643627 - -10.5  -2.57335   ATAACACGGAATTCA                CCCCG CCC CGGGG                GCGCTGCCTCAGTTG  59 34
   Dshi_2487 NONE
   Dshi_2486 2641464 .. 2641485 -  -4.3  -4.30995   TTCGCCACAAAAGAA           GGGCAAGGC GGGC GCCTTGGGC            GAGCGTTCAGTCCCC  66 32
        uvrD 2633537 .. 2633563 -  -3.6  -3.57462   CACGCGATTTGCAAA         TCGCGTTGCAAG CGC CTTCCAAGGCGC         TTGTCCAAGCCGCTT  51 514
   Dshi_2479 2631044 .. 2631086 - -11.3  -3.01712   GGCTCGCCTGGAAGA TCGCCCATGCC-GCCGC-CCC CGA GGGCGGGGCAGGCACAGGCAA ACCCTTCACATTCTT  62 318
   Dshi_2477 2630180 .. 2630215 -  -4.6  -3.01712   GGGTTTTCTGTAATA    TGCGGCGGCGCT TTCCTCCTCCCT AGCGTCGCCGCT     TTTTTTTGCCCGATC  47 58
   Dshi_2476 2628685 .. 2628710 - -11.1  -4.60924   GAAACCCGTGAAAAA         CCGG-CGGCGAT CTC AGCGCCGGCCGG         AAATTTCCCATACCG  95 91
   Dshi_2475 NONE
        mraW NONE
   Dshi_2473 NONE
       ftsI2 NONE
        murE NONE
        murF NONE
        mraY 2620181 .. 2620197 - -13.7  -4.09685   TTCCACGGCCCAAAA              CAGCCGC AGC GCGGCTG              GAAAGGCGGCACCAA  85 263
   Dshi_2467 2618092 .. 2618138 - -15.6  -2.90496   TGTGGCGCGAAATCA GGGCGCGGGCCCGGTGCAGGGC ATC GCGCCCCACCCGTCGCGCGCCC ACCGTGTCAGCTTGC  79 32
   Dshi_2466 NONE
   Dshi_2465 2616068 .. 2616082 -  -3.5  -3.02829   GACAGGGGGGTAATA               GGTCA TCGCC CGACC               CTTTTACCCGTTCTC  43 29
   Dshi_2464 NONE
   Dshi_2463 NONE
   Dshi_2462 NONE
   Dshi_2461 NONE
   Dshi_2460 NONE
   Dshi_2459 NONE
   Dshi_2458 NONE
   Dshi_2457 2604429 .. 2604440 -  -5.8  -2.57795   TCCAGCACGAAGGCA                GGGA TATC TCCC                 AGATCGAGCGCGAGC  46 204
   Dshi_2456 NONE
   Dshi_2455 NONE
   Dshi_2454 NONE
   Dshi_2453 2597025 .. 2597038 -  -9.5  -3.66378   CAGAGGTGACCGAAA               CGCGC GCAG GCGCG                TAGGGTGGCGTCAGA  68 36
   Dshi_2452 2595966 .. 2595996 -  -3.1  -3.26545   GGGACAGAGGATCAA      GGGGCG-GTGGCGT TGGA ACCCGGCTCGCCCC       GGCCACCGGGCCCGC  46 85
        murD 2594110 .. 2594149 - -10.2  -2.65271   GACAACCGGATACCA  TGGCATTCGAAATTTTGG AATA CCAAAATTTCGAATATCG   GGACAGATACGCCTT  59 310
   Dshi_2450 2593072 .. 2593097 - -12.5  -2.53911   TGAAGGGGGAAGGGA         CCGGCCCGCAA CGCC TGGCGGACCGG          CCATCCGTCGTGCGG  67 42
   Dshi_2449 NONE
   Dshi_2448 NONE
   Dshi_2447 NONE
   Dshi_2446 NONE
   Dshi_2445 NONE
        pdxA NONE
   Dshi_2443 2586410 .. 2586429 -  -4.8  -2.53876   TGTGAGGGGAATTCA            GGGCGCCC GTAC GGGCGCTG             TCAGGGTCGGTTCGG  43 26
       aldH1 2584854 .. 2584870 -  -2.1  -3.59979   TCCTCCCAGTTGAAA              GTCCTGA AGT TCTGGTC              GTTCAGTAATCGGCA  49 28
   Dshi_2441 2583851 .. 2583861 -  -8.2  -3.01924   GATGTGTCGTGAACA                 CCGG CAA CCGG                 CTTTGCCTACTGGGC  57 32
   Dshi_2440 NONE
   Dshi_2439 NONE
   Dshi_2438 2580669 .. 2580682 -  -3.7  -4.28254   GCGCAACATGCAAAA               GGCGC TGTT GCGCG                CGCTGCTGATGCCGC  65 336
   Dshi_2435 NONE
   Dshi_2434 2575482 .. 2575492 -  -4.6  -2.71791   ACGCGGGCCCGAAAG                 CCCG CGT CGGA                 GATCCGTCGTCGCCC  44 40
       rbsA1 NONE
   Dshi_2432 NONE
   Dshi_2431 NONE
   Dshi_2430 NONE
   Dshi_2429 2570016 .. 2570029 -  -4.5  -2.78816   CCATGTGCGACGATA               GCAGGC GTG GCC-GC               GATTTCATGCGCGAT  42 223
   Dshi_2428 2569363 .. 2569374 -  -7.2  -4.15044   TTGTCGCGGAATAAA                GGCG CTAT CGCC                 GCAAGCCCCGTTCGA  72 18
   Dshi_2426 2567056 .. 2567066 -  -5.4   -3.2794   CGGGACCGACAGTAA                 CGAT GTC ATCG                 TCGGGAACGCACAGG  51 411
   Dshi_2424 NONE
        murG NONE
        murC 2561513 .. 2561553 - -12.5  -3.59979   GGTGGGCATGGCAAA CCTCCGC-GCCCGCCTGC CCTAGC GCAGGCAGGCCGCGCGGG  CAACATCACCCCATG  77 31
   Dshi_2421 NONE
        murB NONE
         ddl NONE
   Dshi_2418 NONE
        ftsA 2557068 .. 2557081 -  -5.2  -4.59773   TTCGACGCGGAAAAA               CGCC GCGGTG GGCG                GATTTTTTGCGCGAT  74 58
        ftsZ 2555051 .. 2555066 - -11.8  -5.28778   ATCAGGCACAAAAAA              GCCGCC CTGA GGCGGC               TTCCCTGTGCATTTT 100 53
        lpxC 2553935 .. 2553976 -  -4.4  -4.74103   GCCGGAAGTTAAAAA CGGAGATTGCGCC--GCGGCC TCA GGCCACCAGGCGC-AGGTCCG TGCGATGCAGGCCCG  75 3
   Dshi_2414 2552962 .. 2552983 -  -5.7  -2.63301   TACACCTCTAGATGA           TGTGGCGCG TTTC CCCGCCCCA            CGCAAGCCCTGCCAT  46 55
        recN 2551176 .. 2551197 - -15.1  -3.27525   CGCCGCCAAACCCAA           GGGGACGCG GGGC CGCGCCCCC            CGGGTGCGGGCGATT  84 91
   Dshi_2412 2549334 .. 2549347 -  -5.3  -4.07568   CCTCCGGGCGCAAAA               TCCTT GAGG AAGGA                TTTTGCCAAGGATTT  63 90
   Dshi_2407 NONE
        trkG 2543350 .. 2543369 -    -7  -2.75891   AGAGCGATCCAAGTA            CCGCCCTG CCGC CCGAGCGG             TTGGCCATGCTGGCG  48 86
        glyQ NONE
   Dshi_2403 NONE
        glyS 2537893 .. 2537906 -  -4.5  -2.78395   AACTGCCACCAAGGA               CGCAT CTGC ACGCG                GTCGGATCCGGGTCG  42 104
   Dshi_2401 2535224 .. 2535247 -  -6.6  -3.62046   GTATGGCGGCAAGAA          GGCGCTGACC GGAT GGTCAGCTTC           CGCTGCGAAGAACGC  59 18
   Dshi_2400 2534330 .. 2534365 -  -5.2  -2.79796   CGGGACGCTAGCACA    GGCCGCGC-CCGGGGTC TGC GCCCGTGGCGCGCAACC    GGCGTGTTACCGCGA  44 32
   Dshi_2399 NONE
        folP NONE
        glmM 2530697 .. 2530716 - -16.4  -3.76413   CTCGAAAACGCGAAA            GCCCCGGC CGGT GCCGGGGC             TTTTTTGTGCCCATG  93 353
   Dshi_2395 NONE
   Dshi_2394 2528432 .. 2528445 -  -4.5  -3.83816   ACAAACTAACGCAAA               GC-CGC AGG GCGAGC               GCGGGCTTTTCCGTC  58 185
   Dshi_2393 2527028 .. 2527071 -  -9.5  -3.02461   CAAGGCCGCGCAACA GCCGAGCCGGGCCAAGGGGGC GCGC GCCCCCTTG-CT-GGCGCGCC GCGGCAGACCTTCCT  60 188
   Dshi_2389 2523492 .. 2523507 -  -4.6  -3.14132   CTGGCCCTGGATCAA              GCAGCG CTCG CGCTGG               ATCAAGGGCTACATG  47 488
   Dshi_2386 NONE
   Dshi_2385 2519359 .. 2519374 - -10.4  -3.17763   CCCACACGCGACCAA              GCCCGT TCGA ACGGGC               TTGGCCCAGCCCGCG  64 399
   Dshi_2377 2510136 .. 2510186 - -13.1  -3.14132   CCCGGGGCCGACCAA GGCGCCGGGCGGGTTCATCGCGT CATGC ACCGGGCGAACCGGCCCCGCGCC GGGGGCCGGCCGCAG  73 57
   Dshi_2376 2509234 .. 2509256 -  -2.6  -3.62046   GGATGGCCCGAACAA           CCAGGGCG GTCTCGT CACCCTTG           CACGCGACCGGGCCG  48 382
        ureD 2502489 .. 2502506 -  -9.1  -3.29829   CACACCCCCTCACAA             CTGCCAC ACCC GCGGCAG              GGATGCGCCCTCGCG  63 2
        ureA NONE
        ureB NONE
   Dshi_2367 2500836 .. 2500846 -  -8.2  -4.08767   CTGACTTTCGGAAAA                 GGGG CGT CCCC                 GGAACGGGGAGAGCG  73 106
   Dshi_2366 2500467 .. 2500481 -  -5.6   -5.0133   CATTTGCCCAAAAAA               CGAGCG CCG CGCCCA               AGATCAGCTCAGTTT  85 29
        ureC 2498184 .. 2498200 - -11.5   -3.1855   CGCGCCAAGATCCAA              GCGCCCC AGG AGGGCGC              CCTTGCGGCTGGCGC  67 465
   Dshi_2364 2497517 .. 2497535 -  -6.6  -3.03619   AAGCAGTCCGGAAGA             GCCTGGCC TGA GGCAAAGC             GGCATGGTCATGAAG  51 166
        ureE NONE
        ureF NONE
   Dshi_2361 NONE
        ureG 2495084 .. 2495095 -  -7.2  -3.01712   TGCGTCGGCGCAAGA                CCGC CTGA GCGG                 CAGTCGGTGAAAAAC  54 147
   Dshi_2356 2490120 .. 2490146 - -16.5  -3.70902   CGGCTCAGACGGAAA         GGCCGGGGGGC TGTCT GCCCCCCGGAC         CCCCCGAGGATATTT  93 75
   Dshi_2355 2488593 .. 2488627 -  -6.3  -3.13403   TGTTCGGCATCAACA    CGGCGCAGCAGGC-CCG CCT CGTTGAC-GCCGCGCCG    GGGCTGGCCACGGTC  51 231
   Dshi_2351 NONE
   Dshi_2350 2482587 .. 2482597 -  -3.2  -3.65046   GGCGCAGGGCAACAA                 GCAA GGC CTGC                 GGATCGGGGTCAAGA  53 313
         tgt 2479331 .. 2479348 - -11.3  -4.43221   AAACACGCCACAAAA             CCTTCCC CGCG GGGAAGG              TTTCAGAGGCCAGAT  95 132
   Dshi_2343 2475795 .. 2475811 - -10.8  -4.08706   TGTCCATGAGACAAA              GGCCCC GCTCG GGGGCC              CTTGCCGTTCGTCTT  82 47
   Dshi_2342 NONE
   Dshi_2341 2472349 .. 2472369 - -13.9  -4.65895   GTTCGCATGCAAAAA            GGGCGCCCC CTC GGGCCGCCC            TTTCGCTTGTTAATA 100 49
   Dshi_2340 2468770 .. 2468787 -  -4.7   -4.7373   TGAGCCGATGAAAAA             GGGGCCC CGAG GGACGCC              TTTTCCGATCGATAT  78 51
   Dshi_2338 NONE
   Dshi_2337 2465637 .. 2465652 -    -6  -4.07568   TCTTTTCTTCGAAAA              CAGCCC GCCA GGGCGG               CGTGGTGCGGCGGCG  66 216
   Dshi_2323 NONE
   Dshi_2322 NONE
   Dshi_2321 NONE
        dmdA NONE
   Dshi_2319 2450996 .. 2451012 -  -7.9  -3.33661   CATGCAACCACAAGA              CCCAGTC GAA GCCTGGG              CGCAGAGCCGGCCAC  58 197
        phrB 2449403 .. 2449418 -  -3.2  -3.14132   TGTCCGCCGCAGTAA              CGCC GCGAAAAG GGCG               GTGTTTCAAGGGCGT  44 80
         cfa NONE
   Dshi_2316 NONE
   Dshi_2315 NONE
   Dshi_2314 2445438 .. 2445448 -  -3.2  -3.05463   AGCCGGGTCATGGAA                 CCTC CTC GAAG                 ACCGCGGGCAGGCTG  43 7
   Dshi_2313 2444521 .. 2444536 - -10.4  -4.85195   AAAACAACGGAAAAA              TCCGGC CGCA GCCGGA               TCGGGAGAACACTTT 100 203
   Dshi_2305 NONE
   Dshi_2304 NONE
   Dshi_2303 2433369 .. 2433379 -  -2.4  -3.15663   AGTGAGCTCCACGAA                 CACG TCG CGGG                 TCCGGCCCGGCGCCT  43 39
   Dshi_2302 2432905 .. 2432924 -  -2.1  -4.82901   TTGGTCCGATAAAAA            CGACGTAG ACAGG CC-CGTCG            GGGGTCCGGGGGAAA  74 170
   Dshi_2301 NONE
   Dshi_2300 NONE
   Dshi_2299 NONE
   Dshi_2298 2428894 .. 2428907 -  -2.3  -3.61468   TCCCAAGGAAATCAA               TGGGT CCTG ACCCT                AGACCGCTTTGGCAG  49 261
   Dshi_2297 2428492 .. 2428510 -  -4.4  -3.57144   TTTTTGACGCCCAAA             CTCATCGC TGT GCGGTGGG             CCTTCAGGTCGGTGG  53 29
   Dshi_2296 NONE
   Dshi_2295 2426363 .. 2426382 -  -2.8   -3.0693   GCGCAAACGAAATGA            TCCCGACCG GGG CAG-CGGAA            ATCGAAGGCGCGACC  43 51
   Dshi_2294 NONE
   Dshi_2293 NONE
   Dshi_2292 2421242 .. 2421277 -  -3.3  -3.63805   AGGTCAGATGGCAAA   GCA-C-CGGCACCGATC CCGT GATCTGCACCGCGGTGC    CCGGAGGCGCAGCAC  53 519
   Dshi_2285 2413798 .. 2413830 - -19.8  -2.87211   AGGCGGCCTGATAGA      CATGGCGGCCGCCG TCAAC CGGCGGCCGCCCCG      AGCAGCGAGACGCTG  93 52
   Dshi_2280 2405527 .. 2405562 -  -6.9  -3.08173   AGGAATTCGATGTAA    TGACGGCCTTGGCCGA CCACC CCGGCCAAACCC-TCA    GCCGCGCGCGAATTG  52 171
       dmsA1 2402200 .. 2402229 - -13.5  -2.77569   AAAGAATGGCAATCA       TTGAGAGGGCCGG GCAA CCGGCCCACTCGA        AGCGTATCTGAGTGC  72 43
       moeA2 NONE
   Dshi_2276 2399865 .. 2399898 -  -8.8  -3.46602   GGGCGGACAGCACAA     GGC-CCAGCTGCGTC TGGAC GACGCTGCTGCTGCC     GAGGCCTAAGCCGAT  63 491
   Dshi_2271 NONE
   Dshi_2270 2393698 .. 2393729 -  -7.3  -4.07568   GGTTTCTTCTCAAAA      CCTTACGATCCCGG TTCGC CCGGGA-CGAAAAG      GGACTGGTGATCGCC  67 523
   Dshi_2266 2389537 .. 2389554 -  -8.3  -3.72576   CTCCCGGGTACTAAA             GCGCGGC CGAA GCCGCGT              TACAACATCGTCGCG  69 397
   Dshi_2265 NONE
   Dshi_2264 NONE
   Dshi_2263 NONE
        dnaG 2383650 .. 2383672 -  -3.5  -4.65895   GTTCCCACCCAAAAA           CGAATCA GGTCCAAAG TGATTCG           CGCTCTCCACTTTTA  69 70
        rpoD NONE
   Dshi_2260 2380955 .. 2380968 -  -4.5  -4.18197   ATTTCCGAGCGAAAA               CCCTC AGGG GAGAG                TAATACCCGCGGCGG  63 184
   Dshi_2259 2380394 .. 2380425 -  -4.2   -3.9444   CAAAGGCCAAGCAAA      GGGCCGCAGCG-CGG CAT CAGTCGTCGCGGCGC      CGCTTGTTCGGAGGT  58 10
   Dshi_2258 2379772 .. 2379788 -  -5.7  -2.52946   CGTTTCCACAAAATG              GGCACCG CAT CGGCGTC              TTCCCTCCACGTCCT  45 178
        nrdR NONE
        ribD 2377760 .. 2377777 -  -4.8  -3.87373   CATATCGTCTACAAA             CCCCAC CCGGAC GTGGAG              GCTGGCCTACGAGAC  58 463
        ribC 2372729 .. 2372739 -  -2.4  -3.28924   CAGCCGGGCGCACAA                 GGCC AGA GGCA                 GCGGTCCGATCTTGC  45 105
        ribB NONE
        ribH NONE
        nusB 2370058 .. 2370073 -  -7.5  -3.56643   GCGACATGCTCTAAA              CGCGG GCACCG CCGCG               GCGGATATGGCCATT  62 487
   Dshi_2247 2369518 .. 2369554 -  -4.3  -3.72576   GTCTCGTCGATGAAA    GCCAGCCTTTCCAGA TGTCTGG CCATGAAGGGCTGGC    GTTTGCCGATCCATA  56 76
   Dshi_2246 2368878 .. 2368917 -  -6.4  -3.92542   GCCATGTTGAAATAA  CCGGCAGGCGGAAAAT-GG ACG CCGATTCTCCGCGCGCTAG  ATTAAAAGACAACTT  65 121
   Dshi_2245 2368378 .. 2368394 -  -2.1  -3.90112   TCCTCGGGAATGAAA              CGCCTCC CCG GTACGCG              TGGTCCCGCCGCTTA  54 54
   Dshi_2244 NONE
   Dshi_2243 2366885 .. 2366898 -  -2.4  -4.27316   TGCCTCAAGTCAAAA               TGCA TACGAT TGCA                AAATTGCTATGCTAA  62 37
       hisD3 NONE
   Dshi_2241 NONE
   Dshi_2240 NONE
   Dshi_2239 NONE
   Dshi_2238 NONE
   Dshi_2237 2360969 .. 2361019 -  -6.6  -3.53722   GGGAGACCCACAGAA CAGGCCTCGCGCCACGGCAGGCCA GAA CGAGCTGCGATCGCGCCATGCCCG TCATCCGGTCGCGAG  57 26
   Dshi_2236 NONE
   Dshi_2235 2358724 .. 2358752 - -15.2  -4.99134   AGCCGAAATGAAAAA        CGCCGCCCCGCA GATCT CGCCGGGCGGCG        TTTTCGTGTTCGGAC 100 48
        phbC 2355425 .. 2355468 - -19.8  -3.06361   GACCAATGATATAGA CGCTGCAGCGCAGCAATTCA AGTT TAAATTGCTGCGCTGCAGTA TTTTTTATTTCCTTT  93 45
   Dshi_2232 2354838 .. 2354862 - -13.6  -5.42259   GCATGGGCAAAAAAA          GAGGGTGAGC ATGAA GCCCACCCTC          TCTAACGGAACACCA 100 75
   Dshi_2231 2354207 .. 2354257 - -10.9  -4.56642   AAAAAGAAAGAGAAA CCCGCGCATGAAAATGGGCGGGC ACAGG GCCCGCCCGAACGCATACCCGGG GCACAGGAGGGTGCG  95 44
   Dshi_2230 2353535 .. 2353557 -  -4.6  -2.63631   CCAAGGTCGACACCA           TCCCGCGCGG GCA CGGCGCGGCG           GCCGGACCACTTTCG  43 49
   Dshi_2229 2352179 .. 2352197 - -10.2  -3.55622   CGCAATTGGCGGAAA             TCCCGCGC CGG GTGCGGGA             CGGGCGCGCCAATCA  67 419
   Dshi_2218 2342570 .. 2342588 - -11.6  -2.87344   CACGGGCCGCACACA             TGCGCGCG CAG CGCGCGCC             GCTGGATCACGGCCC  67 496
   Dshi_2215 2340654 .. 2340667 -  -5.9  -3.53012   CGGCCGTGTTCGAAA               CGCCC GGTT GAGCG                CGGCCCCTAGAACTG  55 32
   Dshi_2212 2338986 .. 2339010 -  -5.6  -3.05521   AGGATATCCTGAAGA         CCGCCCTGGTG CCGG CGCC-GGGCAG          CTCGTTTTGCGAATG  47 303
   Dshi_2208 2333421 .. 2333460 -  -8.5  -3.02144   GCATCTGCTGGAATA  CCAGATGATCCGCAACC AGGCCG GATGGCGGATCAACGGG   GTGCAGATCCTGCGC  55 345
   Dshi_2205 2330739 .. 2330750 -  -5.8  -4.08216   GGAGGCGCGTGAAAA                TGCG CCAG CGCA                 GGCTGTGCAGTAAGG  65 78
   Dshi_2202 NONE
   Dshi_2201 NONE
   Dshi_2200 2327467 .. 2327484 -  -6.9  -3.53012   GGTGGCCGTGCGAAA             GCCGAGC GCGG GCTTGGC              CCGTTTCGCAGTTCT  57 43
   Dshi_2197 2324298 .. 2324311 -  -8.1  -3.70139   GAACTCCAACAAATA               CACCC TAAC GGGTG                AATTTCTTGTATTTC  69 16
   Dshi_2196 2322942 .. 2322970 -   -13  -3.28924   GAGGGTGGGCGAGAA        GCGCCCGCCCTG GGGGG CGGGTCGGGCGC        TGCCCGCACTTCGCG  74 62
   Dshi_2195 2322266 .. 2322278 -  -9.1    -3.737   CAAGGGCCGATGAAA                GGTCC AGT GGACC                TTTCAAGCTGCGAAC  71 254
   Dshi_2193 2321240 .. 2321250 -  -6.8  -4.62471   GCCAAGGTCGAAAAA                 CCGT TGC ACGG                 CGGGAACTTGGAGAC  79 313
   Dshi_2191 2318385 .. 2318402 -  -4.7  -4.09685   GTTCAGTTCGGAAAA             GCCGGGG GATC CCCCGAT              CCGGCTTGCAAATCA  63 144
         tig 2316981 .. 2317000 - -16.4  -4.13654   CCCGGAAACGACAAA            GGCCGCCC CACC GGGCGGCC             TTCGCGTATCTCCGT 100 52
   Dshi_2185 2312656 .. 2312681 - -16.1  -4.72986   GAGCCGCACGAAAAA         GGGGGCCCGCA TCCC TGCGCGCCCCC          CTGCCGATGGAATCG 100 50
        fabD NONE
   Dshi_2182 2309561 .. 2309582 -  -5.7  -3.53563   ACATGGCTTGTCAAA           GGCAAACGC TTTC GCGCCAGCC            GCGCGGGATGGCTCA  55 38
        acpP 2309143 .. 2309162 - -12.8  -4.27316   CCCCGCAACGCAAAA            CGGCGCCC CGAG GGACGCCG             ACCTGCCTGTTCTGA  95 52
        fabF 2307750 .. 2307779 -  -8.5  -3.05816   GCATGTTGGACGCAA       GCGCGCGCCAC ATCAGTCG GTGACCCGCGC        CAGAACCAGGGAGGC  57 8
   Dshi_2179 2306476 .. 2306497 - -11.5  -5.50723   CGAGTAAAAGAAAAA           CGGCCGAGG TTTC CCTTGGCCG            CTTACCCACTTTTTC 100 136
   Dshi_2178 2304726 .. 2304749 -  -6.7  -3.36694   AGGCAGCCGGAAAGA          CGCCATCCGC GCGCG GCGG-TGACG          TGGATTCTGGTGCGA  55 73
   Dshi_2177 NONE
   Dshi_2176 NONE
   Dshi_2175 NONE
   Dshi_2174 NONE
   Dshi_2173 NONE
   Dshi_2172 NONE
   Dshi_2171 NONE
   Dshi_2170 NONE
   Dshi_2169 2299121 .. 2299165 -  -2.8   -2.6518   GCCAAGACGCAGAAG GCCGG-GCCAGTCGAACTGGC TCATGG GCC-GCTCG-CAGTCTCCGGC AGCGCAAAGGCCCGC  39 1
   Dshi_2168 NONE
   Dshi_2167 NONE
   Dshi_2166 NONE
   Dshi_2165 NONE
   Dshi_2164 2296291 .. 2296305 -  -4.2  -4.36914   CGGCTGCGGATAAAA               CGATGG TCG CCATGG               ATTAGTCTCCTACCG  66 27
   Dshi_2163 NONE
   Dshi_2162 2291358 .. 2291374 -  -6.5  -3.42274   AAAACAGGTAAGGAA              TTCGAGG CCA CCTCGCA              AGTCGTCTATCGGTT  57 337
        cysE 2290341 .. 2290353 -  -5.5  -4.58395   GGCAGGTGTCAAAAA                GCCGA CCG TCGAC                GCGGATGGGGCTGTA  77 181
   Dshi_2154 NONE
   Dshi_2153 2282731 .. 2282751 - -11.8  -5.85178   AACAGGCAAAAAAAA            CGCCCCCG GGCGA CGGAGGCG            TTCTGGTGACATTCC 100 63
   Dshi_2152 2281512 .. 2281528 -  -5.7  -4.72272   GCGGGTTACCAAAAA              CGGCGCG GTT CGCCCCA              GGCGCACGACCTTCG  80 92
        anmK 2278781 .. 2278793 -  -6.9  -3.14344   GATCGCCGCGACCAA                GGCCG GTC CAGCC                CGGCATCACCGGCTG  52 242
   Dshi_2147 2276992 .. 2277026 -  -4.8  -3.27298   TGTCTGAAGGATCAA     CGGTGCAGTAGCGGAA AGG TTCCTCTCGCGCTCCG     AGCGCGGCGGGTGCG  50 79
   Dshi_2146 2276161 .. 2276178 - -14.1  -4.63932   GATGTTCGAAGAAAA             GGGGGCC GGTC GGCCCCC              TTACCCGTTCTTACT 100 36
   Dshi_2144 2273497 .. 2273512 -    -9  -4.62783   CACTGACGGCAAAAA              GGCGTT TCGA AACGCC               TTGATAAAGCGCCTT  91 118
   Dshi_2139 2268506 .. 2268540 -  -8.4  -3.44051   CCGCGATTACGACAA     GGGCCGGAACGACGGC ATC GGCATCGCTGCGGACC     CGGGCACGCCCGTGG  60 362
   Dshi_2134 2264577 .. 2264596 - -12.8  -3.54029   CTGCACGAACGACAA            CACCGCCC CAAG GGGCGGCG             TTTCGCGATCAGAGT  77 58
   Dshi_2124 NONE
   Dshi_2123 2253597 .. 2253637 - -16.8  -2.84878   CTCTGCAATCGAAAT  GCGATGCGGGGGCAGC CTTGGATCC GCCGCCCCCGCCCCGC  GTATGCGTCAGGCGC  83 33
   Dshi_2122 NONE
   Dshi_2121 NONE
       potA2 2250609 .. 2250626 -  -2.7  -3.16564   TCCTGATCGGATCAA             CATGAAA GTCC TCCCATG              GGTCTAGTCTCGCGC  43 195
   Dshi_2119 2248958 .. 2248972 - -11.4  -3.53012   GTGTGCCCCCCGAAA               CCTGGC GGC GCCAGG               CGGTCCCGGAGGACG  72 90
        soxB NONE
   Dshi_2116 NONE
       soxA2 NONE
   Dshi_2114 2242719 .. 2242758 -  -9.2  -3.08679   CCTTTTCAGGCAAGA  GTTATGGGGCGCGCCCCCA AGG CGGGGGCGCGGAC-ATGAC  CGGGGGATGTGCAGA  60 44
        glyA 2241403 .. 2241418 -  -3.2  -3.15583   TGAAGATATCGAAGA              CCGACA GGAA CATCGG               ACTACACGTCGTCGG  44 27
   Dshi_5008 NONE
        purU 2239060 .. 2239072 -  -9.1   -3.9461   GCTGGTCAAGAACAA                CGCCA GGC TGGCG                GCGGATATCGCCGTG  73 85
   Dshi_2109 2236755 .. 2236769 -  -2.7  -4.02534   ACGCAAATGCAGAAA               CGGCC CAGAT GGCCC               CGCGTCCAAATATCC  57 148
   Dshi_2108 2234054 .. 2234111 -    -9  -3.59979   GGGGCTGAGGTCAAA GTGCGCGTGGAGCCGGCGCGCGGGAGCAC TCG GGGTGGCCGCGTGCCGG-TCC-CGC-CAC GGGCGGGCGGCACGC  68 126
   Dshi_2106 2231575 .. 2231587 -  -3.4  -4.18018   GCTGGCCAGCCAAAA                CCAT CGGCT ATGG                CCTTGGAAATCCCTC  61 190
   Dshi_2105 2230715 .. 2230726 -  -2.2   -3.8448   CAAGAGAGGACCAAA                CCCT GAAC AGAG                 CTAACCTATAAACGC  54 31
   Dshi_2102 NONE
   Dshi_2101 2225271 .. 2225300 -  -3.5  -4.25283   AGCTGGGGATCAAAA       GCCGAGAGTTG GTTTTTCA CAGCTTTCGGC        ACACGATGGTTACGC  65 191
   Dshi_2099 NONE
   Dshi_2098 2221410 .. 2221466 -  -2.1  -5.24796   TTCACACAAGAAAAA CCTGCCC-CGACCGGCCGCTTGTCCCG GGTCG CGGGACAATCACGCGCCCTTGGGC-GG TTAGTCGCGCATGAT  84 26
   Dshi_2097 2220246 .. 2220292 -  -2.8  -3.28924   GATGCGCCCGCAGAA GCACCTGCGCCTGACCCAGGCC ACGGA GGTCGAGAGC-GGCGC-GGCGC TGGAGGGCTACGAGA  46 352
         efp 2217746 .. 2217763 - -11.3  -3.56821   AGGACACCGCGCAAA             CCTTCCC CACG GGGAAGG              TTTCAGGCCCCGATC  73 139
   Dshi_2093 2216609 .. 2216659 -  -3.1  -4.37886   TCACGCTTGAGAAAA CCGAGATGCCCGTCGCCCGCGG CCTCGGCC CCGCGCCCGA-AGGCGCCTTGG CGGACCCGCGCGACC  66 466
   Dshi_2091 2215482 .. 2215500 -    -3  -2.76696   GCTCCGTTGAACAAC             CCGCAC AGGACTA GGGCGG             CCTCGCGGCAGGGTC  40 39
   Dshi_2090 2214166 .. 2214197 - -10.2  -3.17212   CGACCAGTGGATCAA      GCTCAA-GCCGCTGC ACC GCAACGGCATCAAGC      CGCGCGACTAAGCCT  64 33
       coxL3 2206777 .. 2206790 -  -6.7  -4.68994   ATCACTAGGGAAAAA               GCGTT TCCA AACGC                GCTCTGCTAGAAAAC  81 116
   Dshi_2084 2203609 .. 2203630 -  -2.2  -3.64703   GTGCTGTCAGGCAAA           CTACCAAG TCCTCC CATGGCAG            AAACGCTAGGCTACC  51 475
   Dshi_2082 NONE
   Dshi_2081 2201022 .. 2201034 -  -4.7  -3.14051   CTACCCGGACCAACA                CCCGG AAG CCGCG                AGTGCCGACGCGGAT  47 521
   Dshi_2079 2199363 .. 2199380 -  -6.9  -3.53012   GGCGGCTCGGTCAAA             CCCGGCA TCGC CGCCGAG              ATCTTCGCCGTGTCC  58 210
   Dshi_2077 NONE
   Dshi_2076 2195711 .. 2195731 -  -3.1  -3.05384   GGGCGGCGCAGCCAA            GATCGGCGC GGA GCTGCGACC            CACCGAGGTCCTGAT  42 462
   Dshi_2073 2193201 .. 2193222 - -17.3   -3.1855   TTTGCCAACACGCAA           GGCCACCCG GCAA CGGGTGGCC            TTTTGCGTATGTCTC  89 424
   Dshi_2067 NONE
   Dshi_2066 2186762 .. 2186789 -  -7.7  -3.35679   CGCGGGCATCGAGAA        GGCGCCGTGCGA GACCA TCG-ACTGCGCC        CGCGTGGCCGCAGCC  59 262
   Dshi_2064 NONE
   Dshi_2063 2184736 .. 2184753 -  -4.8  -3.31144   CGCGGATCGCGAGAA             CGAGCGG GTGCG CCGC-CG             CTACGACACGCTGAA  49 323
   Dshi_2055 NONE
   Dshi_2054 2173475 .. 2173485 -  -2.4  -4.17132   AAAGCCCTTAACAAA                 CCCC CAA GGCG                 CGGCGGGGCCCCTCC  59 158
   Dshi_2052 NONE
   Dshi_2051 NONE
   Dshi_2050 NONE
   Dshi_2049 NONE
   Dshi_2048 NONE
   Dshi_2047 2166949 .. 2166965 -  -6.5  -3.30124   TGGGATCGGCGAGAA              CGCGG CCGAAAT CCGCG              CGCGCATCGTGGCGG  53 196
         tpa 2160549 .. 2160592 -  -3.7  -2.87344   TAGGGGCGCGACACA CCGACCGCCCCGCCCCCGATA ATTG CAACGCGGGCGGTGC--CCGG CAGATCGCTCATGCG  44 34
   Dshi_5005 2159617 .. 2159632 -  -3.2  -3.58343   CCGATGATGTCGAAA              CCCATG TGAT CACAGG               CAAACCCGGCGTGGA  49 166
   Dshi_2029 2149069 .. 2149079 -  -2.4  -3.02511   GTCACGTTGTGAACA                 GCGG CCC CCCC                 TTGTCCCTTGCGCCC  41 110
   Dshi_2028 NONE
   Dshi_2027 NONE
   Dshi_2026 2146273 .. 2146288 -  -2.4  -2.71712   GGCGGGGGTGTAAAG              GGGTCA GCGG CGGCCC               GGGAACTGCGCCAGC  39 13
   Dshi_2025 NONE
   Dshi_2024 2144728 .. 2144743 -    -9  -3.14132   CCGGCGGGGGATCAA              GCGGTT TCGA AACCGC               TTGGACCGCGCACCG  61 42
   Dshi_2023 2142632 .. 2142648 - -10.1  -3.14344   CACGTGGTTCATGAA              CCTCGCC CCG GGCGAGA              GCGTCACGGCGGTGT  62 197
         pgm 2139380 .. 2139390 -  -6.8  -3.44991   GAGAAACCCTAAACA                 CCGA TGC TCGG                 CTCTGTGAACCGGCT  57 59
   Dshi_2019 2137389 .. 2137400 -  -7.2  -3.79906   TGACGTTTACAAGAA                CCGG CAAC CCGG                 CATGACCAGCCCTGC  64 340
   Dshi_2007 2126951 .. 2126967 -    -3   -3.2963   ATCAGGTCGCGATAA              TGTCTG CGCAT CAAACA              TATAGCGCGCATGCG  46 265
   Dshi_2006 2126538 .. 2126568 -  -3.2  -3.08679   GGGGCGGAGGCAAGA      GC-GGCGGTCAGA CCGGGT TCTGGGCGCCTGC       GAAGAACATCAGGTT  43 2
   Dshi_2005 2124969 .. 2124984 - -10.4  -3.28791   AGTGCGCCGGGACAA              GCGGCT TCGA AGCCGC               TTGGGGCGCGGGTGG  66 168
   Dshi_2000 NONE
        xylH NONE
   Dshi_1998 NONE
       xylB2 NONE
        xylA 2114373 .. 2114425 -    -9  -4.15044   CGCCGCCGCAAGAAA GCCGCCTGACCGAGGCCGAACCTGCG CAC CCCCGACGCGGCCTCGGTC-G-CGTC GGGACATGAACCCTC  79 112
   Dshi_1994 NONE
   Dshi_1993 NONE
   Dshi_1992 NONE
   Dshi_1991 NONE
   Dshi_1990 2104535 .. 2104551 -  -6.5  -3.53012   GCGCCGCGCCGGAAA              CGGTCTT TAC AAGCCCG              CGCCATATGCCCTAC  57 226
   Dshi_1983 NONE
   Dshi_1982 NONE
   Dshi_1981 NONE
   Dshi_1980 NONE
   Dshi_1979 NONE
   Dshi_1978 NONE
   Dshi_1977 2090874 .. 2090918 -  -5.4  -4.10429   AAGGATTTTCGAAAA TCCTTGGC-CGCCCGGCAGGC CTTG GCCCGCCGGGCGCGGGTCGGT CCGTCAGGACCGACA  63 52
   Dshi_1976 2089727 .. 2089737 -  -2.4  -3.54543   ATGTACGCCGCGAAA                 CGGC TCT GTCG                 AGGGCTCAGGCCAGC  49 31
   Dshi_1975 2088713 .. 2088766 - -16.9  -2.84103   AAAATACTCACGACA CGCCGC-CCGCCGGCCCAAAGCGACAC AAGC GTATCGC-C-GGGCC-GCGGTGCGGCG CTTCACCATCCCATA  87 249
   Dshi_1971 2083988 .. 2084026 -  -4.3  -3.96337   TGAAAAATCAGGAAA   TCAGGAGGGGCGACGCC ACATG GGCGCCGCCCCGGGCCA   CGGTCAGTCCCGCGG  58 29
   Dshi_1970 NONE
   Dshi_5004 2080026 .. 2080036 -  -4.6  -3.14132   GGGCCGTGCGATCAA                 CGCA TGC CGCG                 TGATGATATGTGGAT  48 117
        aceE NONE
        aceF NONE
        lpdA 2074081 .. 2074108 - -20.6  -3.17723   GCACCCCCAACGCAA        GACGCCGCGCCC CGGG GGGCACGGCGTC         CGGGTCTTGACCCTA  95 48
   Dshi_1965 2072887 .. 2072901 -  -2.8  -2.71712   CCGGGCCTGCCAAAC               TCAACC ACG GTTTGA               CACGAATTTGCAAAC  40 63
   Dshi_1964 2070941 .. 2070958 -  -4.1  -4.13767   TGCCTGACGGTAAAA             GGTTACG CATT CGTAAAC              TCGATCCCACACATG  63 182
   Dshi_1963 NONE
   Dshi_1962 NONE
   Dshi_1961 NONE
   Dshi_1960 2056069 .. 2056084 -  -2.5   -2.9914   CATGGCTCAGAGATA              CCCGA GGGATT TCAGG               CGTTCGCGGATCTGC  41 1
   Dshi_5003 NONE
   Dshi_1958 NONE
   Dshi_1957 2050955 .. 2050988 -  -7.9  -4.07885   GATCTCTCCGCAAAA     GTCTGCCCCGGGCGC GGCT GCGCCCGGGTTCGAG      GCTCAGGTGGTTCCG  70 42
   Dshi_1956 NONE
   Dshi_1955 2047971 .. 2048015 - -15.8  -2.57931   TTGACCGCGCAGAAC CAGCAGACCGCGCCGC-AGAGC CCG GATGTGGCGGCGCGG-CTGCTG CTGTGGCTCTGCGCG  74 162
   Dshi_1951 2041515 .. 2041531 -  -7.9  -3.36803   CAAGGTGATCTACAA              GCTGGTC TAT GACCTGC              CCATCGACGTGCCCT  59 407
   Dshi_1949 2039332 .. 2039349 -  -4.7  -3.72576   CTGTCCTTGACCAAA             CGGTCCA GACG CGGCCCG              TTCAAGATCTATTTC  58 189
   Dshi_1948 NONE
       rbsA4 NONE
   Dshi_1946 NONE
   Dshi_1945 NONE
   Dshi_1944 NONE
        codA NONE
   Dshi_1942 2031276 .. 2031299 -    -3  -3.90762   GATGCCCGAAAAACA          GGCGG-TGCCC TTG GGTCAGCCGCG          GCCCCGGTTGGCGGC  56 17
   Dshi_1941 NONE
   Dshi_1940 NONE
   Dshi_1939 2028055 .. 2028071 -  -9.3  -2.81464   TCACGATCGAGGAGA              GCCCCCG GGA CGCGGGC              ACGGAGTTCCGGTTC  56 364
   Dshi_1937 NONE
   Dshi_1936 NONE
   Dshi_1935 2023328 .. 2023354 - -17.2  -3.61178   CTGACCGATCCCAAA         CGCGCCCCGGGC CTC GCTCAGGGCGCG         TTCACATGCTCCCAC 100 16
        ileS 2019261 .. 2019298 -    -7   -3.5594   AATGTAGCGCCCAAA  CCGCTTCGGCCCACTCCC CTGC AGGAGCGGGCC--ATCGG   CTGTGGCAGTTCCTC  59 45
   Dshi_1932 NONE
   Dshi_1931 2018095 .. 2018108 -  -5.2  -3.53012   GCCCGCGCCCGCAAA               GCGG TCTCAG CCGC                GCGGCAGGCCCAGCC  53 18
   Dshi_1930 2016819 .. 2016833 -  -5.6  -3.33261   CGGCAAGGGCGACAA               GGAACG GAT CGTGCC               GGTCCTGCCCGCCGC  51 391
        priA 2012550 .. 2012562 -  -4.7  -3.90744   GGGCTGTGTAAACAA                CCGCC CCC GGCGC                GACCGGCTCAGAAGA  60 33
   Dshi_1925 2010210 .. 2010231 -  -7.9  -3.64703   GGCTGCTGAGCGAAA           CCGGGCCGCG CGC CG-GGACCGG           TCTAATCCCCTGCCC  62 27
   Dshi_1922 2007217 .. 2007230 -  -9.5  -3.50853   CGCCCGTAATCAGAA               CGCCG GGAC CGGCG                TCGGGCTCGGGCTGG  64 113
   Dshi_1920 2004884 .. 2004899 - -11.8   -5.0925   TTGCAAAAGCAAAAA              CCGCCC CGGA GGGCGG               CCTTGATACTCTCTT 100 202
   Dshi_1914 NONE
   Dshi_1913 1996511 .. 1996522 -  -3.6  -4.22375   AGATCACGGAAGAAA                CGCG CCGC CGCA                 TCATTGCTGAAAATC  65 241
   Dshi_1909 1993503 .. 1993515 -  -4.1  -4.93318   CACAACTGACAAAAA                TGCAA TTT CTGCA                ATGGTTTGCTGGTGT  77 469
   Dshi_1899 NONE
   Dshi_1898 1979571 .. 1979607 - -15.1  -2.70932   GTCTGTGCGCAAGGA    TCGGGACCGCGCGCTTC CGA GAGGCGCGCTATCCCAA    CGGATAGGCTCACAA  78 35
        algA 1978016 .. 1978044 - -19.6  -5.24989   GCAGACACGAAAAAA        GCCCGCAGTGCC GGTGG GGCACCGCGGGC        TGGGCCTGCATCCGT 100 49
        algD NONE
   Dshi_1895 1973827 .. 1973850 - -13.8  -2.72661   CATGATCGGGAAGGA          GGCGGGCCTC TTCT GACGCCCGCC           CCGGTGGCGATCAGA  72 36
   Dshi_1890 1967430 .. 1967442 -  -5.5   -2.8547   ATTGGTTAGAGCAGA                GCGCT CAT AACGC                TTTGGTTGCGGGTTC  48 39
        purM NONE
        purN NONE
   Dshi_1887 1964360 .. 1964370 -  -2.4  -2.84059   CACACAGATGAAGGA                 GGGG CCG CCCG                 GTCAGCGCGCGTCAG  40 37
   Dshi_1886 1963375 .. 1963402 -  -2.6  -2.73364   GCTCTACGGCAAGGA        CGTGACCAGGGGC TGA GCGCCC-GTCAGG        CCGCCAGGTCCACCA  39 21
   Dshi_1883 NONE
   Dshi_1882 1959959 .. 1959969 -  -3.2  -2.74597   CGCAGACAGACAGGA                 CACG GAT CATG                 ACGCCGCCCTCACAT  40 21
   Dshi_1881 NONE
   Dshi_1880 1958410 .. 1958432 -  -5.4  -3.61894   AAGCTCGGCGAAGAA           CGGCAGGAAC ATC GCTCAGGCCG           CCATGCGTTCGATCA  55 18
   Dshi_1879 NONE
   Dshi_1878 1956072 .. 1956088 -  -2.1  -3.54741   GATCACTTTGCGAAA              CCGCTGC TGC GCAGCTT              CGCCCGGAACGCGCC  49 77
   Dshi_1877 1954597 .. 1954613 -  -5.7   -3.5882   GAGATCACCGGCAAA              CCGGCCC TGC GCGCCGA              GATGATCCAGCGGGC  54 184
   Dshi_1874 1953133 .. 1953171 -  -3.7  -3.05022   CGGTCGAGACATAGA  CCGGG-GCAAGGCCCGCGC CAA GTCCGAACCC-GCGCCCGG  ATCACGGACACAGGA  45 27
   Dshi_1873 1952652 .. 1952663 -  -2.2  -3.55444   GTGTCATGTTGGAAA                CTCC TCCC AGAG                 TTCTTTGGTCTCAAG  49 159
   Dshi_1872 1951325 .. 1951349 - -22.9  -4.72272   GGTTCCCATGAAAAA          CGCGCGCGGGT AGG ACCCGCGCGCG          CCGATTGTCTTGGGG 100 51
   Dshi_1871 NONE
   Dshi_1870 NONE
   Dshi_1869 NONE
   Dshi_1868 1947511 .. 1947532 - -14.4  -5.78622   TGATGGGAAAAAAAA           GGCGCGCC GGTCGG GGCGCGCC            TGGGATCGGTCAGTA 100 35
        glnT 1946137 .. 1946167 -  -8.9  -2.75535   CCAACAGGGCAAGGA      CGGA-GCGGGCCGG GCGG CCGGGCCGCGTCAG       ACGTCCAGGGTGTGC  54 22
   Dshi_1866 1945058 .. 1945071 -  -2.3  -3.18264   CTTGTCACCTACCAA               GGAGT AAAC ACGCC                TCCTGCACCCGCTCA  43 162
   Dshi_1865 1943843 .. 1943856 -  -4.5   -3.1855   GGCCCGAACACCGAA               GCCGCG ATC CG-GGC               GTACCAGCGCGCCCG  47 214
        yajC NONE
        secD NONE
        secF NONE
   Dshi_1857 NONE
   Dshi_1856 1935699 .. 1935722 -    -6   -3.5936   GGGAAAGCGGCGAAA          TCACGCGGTGG GCA CCACCG-GCAA          CAGGGCCAGGCCCAC  57 2
        ccmA 1935047 .. 1935060 -  -3.7  -2.55351   CGCCTTCACAGGAAC               GCCTC GTCG GTGGC                CATGTCCTCGGCGGG  41 2
        ccmB 1934339 .. 1934386 -  -2.6  -2.85078   GACATGGCAGGAAAG TAGGACGCCG-GGCCGCGGGCC GCAACG GGCCAAAAGCCGCGGAG-CCTA GCGCAGGTTGATACG  40 23
        ccmC 1933528 .. 1933540 -  -6.9  -3.45849   TCCACAGCACCAGAA                GCCCC ATC AGGGC                GAGCGAGACCACGTA  57 82
   Dshi_1852 1932797 .. 1932810 -  -3.7  -4.11484   CGCAACCTGGCAAAA               GCCCC CGTC GCGGC                GGAATGATCCGCGCG  63 122
   Dshi_1850 1928590 .. 1928621 -  -3.7  -4.18018   GTTGCTGATCGAAAA     GGGCGTTCTGACCCC GGCG GAGGTCAC--CGCCC      AGGTCACGCAGATGG  65 508
   Dshi_1841 1922982 .. 1923000 -    -8  -3.14126   GCACAAAGCCGAAGA             CCGCCAAG CGA CCGGGCGG             TCAAGGTTAACGACC  56 133
   Dshi_1837 1917871 .. 1917896 -  -4.7  -2.73875   CGCCGCCCAAGAGGA         GCTGTTC-GAGA TCT TCCCGGAACTGC         GCGAGGCCGAGGATG  43 107
   Dshi_1834 1913501 .. 1913516 - -11.8  -2.87344   CACTCGGCTGAGACA              GGCGCC CGGG GGCGCC               TGTCATGCTTTCGGC  67 48
   Dshi_1833 NONE
        siaT NONE
   Dshi_1831 NONE
   Dshi_1830 NONE
   Dshi_1829 NONE
         xcs 1907323 .. 1907350 -  -7.6  -2.71364   CTACGGTTGGAACGA        GCCGCAACACGC GGAT GCGCCTTGCGGG         CCCGGGATTGGGGAG  52 77
   Dshi_1827 NONE
   Dshi_1826 NONE
        pta1 1904296 .. 1904306 -  -8.2  -3.55622   TGGAACTGGGGCAAA                 GGGG CGA CCCC                 ATCGGGATACGAAGG  65 488
   Dshi_1824 NONE
   Dshi_1823 1901340 .. 1901352 -  -3.3  -3.59315   GCAAGTATTGTGAAA                GTCGG CTT CCTAC                GATCTCGAAAACACT  51 49
   Dshi_1819 NONE
   Dshi_1818 NONE
   Dshi_1817 1895530 .. 1895572 -  -9.1  -3.56643   CGCAGATGCGCGAAA GTCCACCGCTATCGCCGCGAG CCC CCCGCAG-G-CAGCGGCGGGC ACGCCCCCCTCTTCA  68 155
   Dshi_1816 1894082 .. 1894116 -  -3.3  -3.86202   GCGCACTAGAGCAAA    GCTGCGGCCCCGTGGC AATC GCCCCGGGGGC-CTGT     CGGTGCCTGGCCGGG  56 42
   Dshi_1815 1892999 .. 1893028 - -20.8  -3.37493   CCCGGAAGACATGAA       GCACCGCTCGGC TTGACC GCCGAGCGGTGC        GGTAGGTGAAAGACA  95 245
   Dshi_1813 NONE
   Dshi_1812 1888998 .. 1889017 -    -8  -3.55444   CGGCCATGCCCTAAA            TTGGTTTA GCCT TAAACCAA             ATCGCTCAAGCCCGC  62 31
        lpdV 1887572 .. 1887582 -  -2.4  -2.72152   GCGATCAGAAATGCA                 GGGC GCG GCCG                 TAGGCGTCGAGCACC  39 4
   Dshi_1810 1886308 .. 1886335 -  -5.5  -2.53911   CGAAGGGGGAACGGA        CGCACAGCGCTG CGCCT CAG-GCGGCGCG        TCGCGCCAGGTGCAG  45 14
        uvrA 1883202 .. 1883239 -    -6   -3.8186   GAGTTCAAGGAATAA   TCGCACCGGGGCCGCC TGTCCG GGCGGCCTCGCCCCGT    CTTCTTTTGTGCCGA  60 147
   Dshi_1804 1875614 .. 1875647 - -12.3  -3.04263   AGGCGACGCTGAAGA     CCCTGCGCAAGCGCG GTAA CGCGATCGCGCTGGA      GGCGGCGAACCCCGC  67 305
   Dshi_1797 1868694 .. 1868709 - -10.4   -3.2964   AAACGCCTTGGACAA              GCGCCT TGCA AGGCGC               TTGGGACGCGATTTC  66 83
        pdxH NONE
   Dshi_1788 NONE
   Dshi_1787 1859308 .. 1859334 -  -4.2   -4.1899   CTACGGTACCCAAAA         CCGTCGCGCTAC CAG GCTGCGCTACGC         CCCGACGAGGGCTTC  63 82
        nrdJ 1854009 .. 1854027 - -10.2  -3.90112   CCTTGCTCAAGGAAA             TTGGCCCG TTG CGGGCCGA             TCCCCTCAGCTACAG  76 288
   Dshi_1783 1852460 .. 1852481 - -18.7  -4.62336   ACCGGATCGCAAAAA           GCCGCGCCC CTGA GGGCGCGGC            TCGTGGCACTCGGCG 100 99
         lon 1844569 .. 1844592 -   -21  -4.46926   CACCGCACGACAAAA          CGCCCCCCGG TTTC CCGGGGGGCG           TTTTCTGTTCAAATA 100 52
   Dshi_1775 1841025 .. 1841041 -  -9.3  -2.98823   TCCCCTGCACATAGA              CGCCCCG CGC CGCGGCG              CAACCCCGCAGGCTC  60 39
   Dshi_1774 NONE
   Dshi_1773 1839813 .. 1839865 -  -8.1  -3.57561   CCTCAAGTCTTCAAA TATCCGCGCCGCAGGCCGCCGGACC GCA AGTCCGGCCCCCGGCGACGTGCGCA GCACGGCGCAAAACC  65 128
         edd NONE
         eda 1834601 .. 1834613 -  -3.3  -3.66018   GCACGAGCGCAAGAA                GGTGA TGT TCGCC                AATTCCGACGCCATC  53 459
   Dshi_1766 1832574 .. 1832587 -  -3.7  -3.53444   CCAGTGCGGCGTAAA               CGCCC GTCA GGGGG                TCTCGCGCGGCACGG  51 18
   Dshi_1765 1830234 .. 1830270 -  -7.9  -3.28791   AGTGCGCCGCCACAA   GCGCGCGCCGCTGGTC TTCGTC GGCCA-CAGCGCGGGC    GCCCCGCTTGCCTTC  56 446
   Dshi_1762 NONE
   Dshi_1761 NONE
        murI NONE
        argC NONE
        ccmE 1821834 .. 1821851 - -12.7  -3.16742   GTTAATTTCGATCAA             GCCCTGC GCGC GCAGGGC              GTTGCATGACGCACA  73 52
   Dshi_1757 NONE
   Dshi_1756 NONE
   Dshi_1755 NONE
   Dshi_1754 1819949 .. 1820004 -  -3.9  -2.59431   TGGTCTGATAACTCA TG-GGGCGTGCTCCTGCGCAACCG GTTTGCGGT CACTCTAGCAGGGGCACGCCCACA GGAAAGCGGAACGCG  41 61
   Dshi_1753 1819170 .. 1819182 -  -4.7  -4.00532   TCGGCAAAGATGAAA                GGGTC AGC GCCCC                TCGAAGGAGGCCGAG  63 16
   Dshi_1748 1813858 .. 1813875 - -12.7  -5.45652   ACCGCCAACAAAAAA             GGCAGCC CAAA GGCTGCC              TTTTTTCATTTCAGG 100 53
   Dshi_1746 NONE
   Dshi_1745 1810796 .. 1810811 -  -6.1   -4.3739   TACGGCGCGACAAAA              CCGGA TATCGG TCCGG               AGTTCAAGCAGGCCG  71 66
        coaD 1810109 .. 1810138 -  -8.5  -3.04792   CCAGCATTCTGAACA       CGATCCGCTCCGC CACC GCCAAGCGGATTG        CCTATGTCCGCACGG  57 135
   Dshi_1743 1809205 .. 1809220 -  -6.1  -3.29947   CACGGACCAGACCAA              GGTGC TGGAAG GCACC               ATGTGCCGGGTGCTG  53 119
   Dshi_1739 1805731 .. 1805752 -  -7.9  -3.53012   TCTTTTGTGCCTAAA           TACTCCCGG GGGT CCGGGGGCA            GGCAGCCCCCGGTCG  60 83
   Dshi_1737 NONE
   Dshi_1736 NONE
        speB 1801547 .. 1801572 -    -6   -2.9914   GATGTGGCAGATATA         GGGCGCGCGA TCAGGC TTGCCCGCCC          TTGCGGCGTGTCCAG  49 10
   Dshi_1734 1800991 .. 1801031 -  -6.5  -4.10429   AAGCACGGCGCAAAA  CCTCATGTCCCGGCGCGCG GCA CGCGCGGCGGGGCCTTTTG  GCAGTTGGATCAGCG  67 35
        prfA NONE
        hemK 1798859 .. 1798869 -  -5.4  -4.26777   GGCAAGCAAAAAACA                 GACA AAA TGTC                 CCGCAGGATCGCGTC  68 69
   Dshi_1731 1798007 .. 1798027 - -11.1  -4.05714   ACCTTGAACGACAAA            GGCCCGG CGCATGT CCGGGCC            TTCGTCGTTTTCGCA  82 45
   Dshi_1729 1796412 .. 1796432 -  -8.1   -2.9732   GTCCAACCGAAATCA            GGCGCGCGC GCT GCGGGCGCG            GTCCCCCGCCGTGAG  57 2
        argS 1794546 .. 1794566 -  -6.2  -2.75064   CTCCGCAGCGAAGGA           GGGATCTGA CTGC TCAG-TCCC            GGAGGCGGTGCGCTT  46 60
   Dshi_1727 NONE
        nagZ NONE
   Dshi_1725 NONE
   Dshi_1724 1790723 .. 1790736 -  -5.2  -3.28924   CATTTCGCGGCATAA               GCCG TCACTG CGGC                AGATCCGGGGCGAAG  50 355
   Dshi_1716 1784061 .. 1784079 -  -5.9  -4.28656   ACCCAAGACGGAAAA             GGCCTGG ATGCG CCACGCC             ACGGACCCGGTGATC  70 346
        purL NONE
   Dshi_1712 NONE
   Dshi_1711 NONE
   Dshi_1710 1778003 .. 1778023 - -16.1  -5.63517   CCGGCAAAGAAAAAA            GCGCCCCCG GGC CGGAGGCGC            TTTCAAAGTCTCGGC 100 50
        mscS 1775888 .. 1775913 - -10.3  -4.08216   GCACCGCGCGCAAAA         CCGGAACCGCC TTCT GGGGGTGCCGG          AGCTATCCCAAATGC  78 445
       msrB2 1773877 .. 1773891 -  -4.2  -4.57569   TCATCTGTGCAAAAA               TACTCC GGG GGAGTC               GGGCATGCGACGGGG  73 51
   Dshi_1703 1771936 .. 1771951 -  -3.2  -2.94144   CGCGCACGGAAATCA              GGCTCA TGCG TCAGCC               TTTTCGATGCAGGCC  42 13
        znuC NONE
   Dshi_1701 1770098 .. 1770145 -  -4.1  -3.87815   TTCGACGGCCAGAAA GGCCAGGCC-GCCTATGCC-GCCT CCA AGGCCGGGGT-GACGGGCCTGTCC CTGCCCATGGCCCGC  57 282
   Dshi_1699 1768686 .. 1768711 - -19.7   -5.1615   CCAAGACGCAAAAAA         GGGGCGGGCCC GACC GGACCCGCCCC          AAATCGTCACAAGGC 100 48
        cysS 1767068 .. 1767086 -    -3  -3.61894   AATGGTGTGCAATAA             GTACCGCT CCG AGAGGTCC             GACAACAATTGCGAA  51 64
   Dshi_1697 NONE
   Dshi_1696 NONE
   Dshi_1695 1764102 .. 1764115 -  -3.9   -4.0896   AAATCCTTGGCAAAA               CTTTT TGAT AAAAG                TTTTGCGCGCTACCA  61 35
        cbiD 1759475 .. 1759497 -    -4  -3.27298   CCCGCCAAGCAGCAA           GAGCCGGC TCATGAC GCCCGCCC           CATGATCTGCCCCGC  48 11
        cobK NONE
   Dshi_1689 NONE
   Dshi_1688 1757310 .. 1757326 - -15.1  -3.14132   CGCCTGCCGGACCAA              GGCGGGG ACA CCCCGCC              CCTTTCACTCTCCAT  83 157
   Dshi_1687 1756581 .. 1756593 -  -6.2  -4.11216   GGTTCATCGGGAAAA                GGCG TGCCC CGCC                CCCGACCTTGCGGCC  67 104
   Dshi_1686 1755669 .. 1755687 -  -6.7  -3.53811   TCGAGCTGGGCGAAA            CCCT-GGC CGAG GCCGAGGG             CGCGGTGCAGCTCAA  58 106
         zwf 1753108 .. 1753121 -  -3.8  -2.58544   GTGCAGGTCCATAAT               GCCT CCCCTC AGGC                TTCGAGATCGCGCCA  41 20
   Dshi_1683 NONE
         pgi 1750729 .. 1750739 -  -6.8  -3.13403   GCTGGTGGAGCAAGA                 CGGT AGG ACCG                 GCTACCCCCTGACCG  52 87
   Dshi_1673 NONE
   Dshi_1672 1741315 .. 1741331 -  -8.1  -3.50393   GCTGAGCGCAGACAA              GGATTTT CAA AAAATCC              TTGTGATTACTTTTA  63 42
   Dshi_1660 1725815 .. 1725837 - -14.8  -4.57837   ACATGCGTGCAAAAA           GGGCCCACGC AAG GCGTGCGCCC           CATTCACTTCATAGC 100 47
   Dshi_1659 NONE
   Dshi_1658 NONE
   Dshi_1657 NONE
   Dshi_1656 1721732 .. 1721742 -  -2.4  -3.09878   CGTACGCACCGAACA                 GGAG TTG CGCC                 TATGTCGCTTCGTAG  42 459
   Dshi_1652 1717156 .. 1717177 -  -2.8  -3.33744   CCCCCTCTTAAAAAT           GCCGCGTG GGGTTG CGGGCGGC            CCGATCAGGCCGCCT  46 54
   Dshi_1651 NONE
   Dshi_1650 NONE
   Dshi_1649 1713269 .. 1713289 - -13.3   -3.1247   ACTCCTGATATTCAA            CACCGCGAC CGC GTCACGGTG            CCTTCAGCGCAATGC  73 18
        malK 1711874 .. 1711908 -  -3.5  -3.05343   CTGACATCGCTAATA    CGA-GC-CGCACCCTAG CCA CTCTGGCGCGCGCATCG    CAAGACGCCACCGGG  43 238
        hpcH NONE
        guaB NONE
       rsmB2 NONE
   Dshi_1644 1705914 .. 1705932 -  -4.4   -2.8806   AAAGGTTTCCACATA             CGATCTCC GTC GGGGAACG             GGTTAGCTCGCGTCT  44 28
        recA 1704640 .. 1704659 - -12.1  -4.27617   CACACCTCATGAAAA            CGGCCCC GCGAAG GGGGCCG             TTTTCATATCACTTC  91 59
        alaS NONE
   Dshi_1641 1701530 .. 1701555 -  -5.3  -3.91897   CCGCCCATGCACAAA         CCGTCGACGCGC CCT GCCCGTCC-CGG         AGGTGGACGCTTGCG  60 57
        iscR NONE
        nifS NONE
        sufB NONE
   Dshi_1630 1694007 .. 1694025 -  -5.2  -3.45033   GAGAACCGAGGACAA             CGCGAC TGCGAAG GCCGCG             GCAAGGGCGGCCACA  53 332
   Dshi_1629 NONE
   Dshi_1628 NONE
        sufC NONE
        sufD 1691273 .. 1691288 -  -6.8  -2.74597   CCGAGACAGACATCA              GC-GGCG GCG CGCCAGC              CAGTTTCCGAGACGT  49 7
   Dshi_1625 NONE
   Dshi_1624 NONE
        sufS 1688902 .. 1688918 -  -4.3  -4.71482   AGCAAACGTGAAAAA              GCGCTGA TGC CCACCGC              ATAGCTACCCGAACA  75 30
   Dshi_1622 1686803 .. 1686827 -  -2.6  -3.94811   AATACGAGTCACAAA          GCCGCTCCGG TCAGG CTGGGGCCGC          GTAGCCCTTCGCCCA  54 90
   Dshi_1621 1685472 .. 1685490 -  -5.2  -3.46068   GGTCGAAGGCAAATA             CGTCAAGG AAG CCCTGAAG             GAAATCAATTACTTC  53 384
   Dshi_1619 1683337 .. 1683351 -  -4.9  -2.88999   TCCTCAGAGACCACA               GAGGG CACGT CCCCC               GGGGCTCTCCGAGAC  46 41
        lpxD NONE
   Dshi_1617 1681884 .. 1681894 -  -4.6  -3.40403   GGCCGGTGATCACAA                 CGCG GCG CACG                 AATCAGGCGTCCGTC  53 28
   Dshi_1616 1680649 .. 1680666 -  -4.7  -3.69354   TTCGACAAGTTGAAA             GCGGAGC TCAC GCCCCCC              GAGTAAGCACGCGCA  58 41
        yjgR 1677770 .. 1677791 -  -6.5  -4.16284   ACATTCTCGAAGAAA           TCGTCGGCG AGAT CACGGACGA            GTTCGACCCGGATGC  66 308
   Dshi_1612 1675576 .. 1675590 -    -7  -3.21595   AACCGCGATCAGCAA               GGGGGC GGC GCCCTC               GAAATACCTCTTTCC  54 314
        aroK NONE
        aroB 1671351 .. 1671363 -  -5.5  -4.17048   TCGGCGCGAAAAGAA                CATCG GGT CGACG                CGATACAAAAATCAT  67 70
   Dshi_1607 1669562 .. 1669580 -  -9.6  -3.29144   CGAGCGGCGCGAGAA             GACAGAGT GGC ACTCCGTC             GCGATCTTCTCGGAA  61 411
   Dshi_1605 1668430 .. 1668461 -    -8  -4.04206   GGAGGCGGAGACAAA      CGCGCTTGCC-ACCA AAG TGGCCGAGAAGCGCG      GGGCCGTGGTCGCCA  69 205
   Dshi_1603 1667263 .. 1667276 -  -2.4  -3.94188   ATGGACTGCAAATAA               GGTA TCTATT TACC                CCACATAATTGTCGA  54 110
        rplM NONE
        rpsI 1666131 .. 1666151 - -16.1  -4.21194   GGCGAGCAGCGAAAA            GGGCGCGCC ACC GGCACGCCC            TTCGCAAGCTCGAAT 100 52
   Dshi_1600 1665669 .. 1665709 -  -7.4  -2.66593   ACAAGTGGAAAGTGA CGATGCCGCCTGAAGCGCT CTGA AGCGCG-CTGGCGGGGTCG  GGCCGCGCGCTCAGC  51 36
        potB 1664712 .. 1664744 -  -3.3  -3.32343   CGCATAGGTCCACAA     CACCCGGCGG-CTC ATTTGG GGGCCCGCCCGATG      TTGCGGGTCACAAAC  46 4
   Dshi_1598 NONE
       potA1 1662340 .. 1662358 - -10.2  -3.68569   CGAGGCAGCCAAGAA             TGCCGGCG TGA CCCCGGCA             GCGGTCTATCGCCAT  70 523
        mttb 1651247 .. 1651262 -  -2.4   -5.1971   ATCAAAAAGCAAAAA              GCGCCG CGCC CGGCAA               AGGCGTTGCAAGAGC  83 204
   Dshi_1584 1649725 .. 1649756 - -18.1    -5.252   GATGCGCAGAAAAAA      CGCGCAGTGTCCC TGACCC GAGACACTGCGCG       CAAAAAAGGCAAGCC 100 72
        lipA 1648471 .. 1648483 -  -3.3  -2.87931   CCCACTGCGCAGATA                GGCCA TGG CAGCC                TCCAAAACTCGAAAC  42 195
   Dshi_1582 1647654 .. 1647664 -  -2.4  -3.06183   TCGATGTGCAGGCAA                 CCTG GAT CGGG                 TTCGAGATTCCGGAC  41 319
   Dshi_1580 1646387 .. 1646399 -  -3.3  -3.03159   CGAACCTTGCGAAGA                CCGAG ATG CTGGG                TGTGACAGCACCCAC  42 311
         dus NONE
        ntrB NONE
        ntrC 1640905 .. 1640917 -  -4.7  -2.78463   ACTGCTCGCACGACA                CCTCG TTC CGCGG                GCGAACCCGCGTGAC  44 70
        ntrY NONE
        ntrX 1636944 .. 1636957 -  -9.5  -2.89564   TCGTGACCGCAGAGA               CGCGG CAGG CCGCG                GCAGGGCCGGGCAGT  56 253
        trkA NONE
        trkH NONE
         hfq NONE
        hflX NONE
   Dshi_1562 1626192 .. 1626202 -  -6.8  -3.63744   GTCTTTGCGAAAATA                 CTCC GGG GGAG                 ACGCGCGCAGCGCAG  59 113
         mfd 1621999 .. 1622009 -  -2.4  -3.95424   ATGACGAAGAGGAAA                 GCGC GGT GGGC                 AGCCTGGGCGTGGAT  56 419
   Dshi_1558 1619654 .. 1619668 -  -9.2  -2.80816   GGCGCATCGAGGACA               CGGCGA AGG CCGCCG               GATTGCCGGTGGATT  56 414
   Dshi_1555 1616854 .. 1616891 -  -4.7  -3.40522   ACTTCCTGAGCACAA   CGCGCCAGGCCGAAGCAA TCG TCGCCGAGGT-TGGCGCG   CCGAACCTGCGGCTG  51 365
   Dshi_1551 NONE
   Dshi_1550 1613010 .. 1613032 -  -9.8  -3.55444   GCTCCATGGCCTAAA           GCCACCACTC ACG GAACGGCGGC           ACGGTGCCACTGCCT  70 84
   Dshi_1547 NONE
   Dshi_1546 1608773 .. 1608790 -  -8.5  -3.41989   ATTCAGAAAATGGAA             TGTTTCG CATG CGAAACA              AATCTCTGGAAGCCC  63 126
   Dshi_1544 NONE
   Dshi_1543 1604712 .. 1604737 - -11.1  -3.14468   CGGCAGGACAGCTAA         GGCTGACGCGC CTCA GCACACCAGCC          GGGCCAGGTCCACCG  67 12
   Dshi_1531 1591874 .. 1591894 -  -8.2  -3.10531   CGAAAATCAGAGAGA            GACGACCC CGACC GGGCCGCC            GCGATCGGTCAGTGC  57 34
   Dshi_1527 1588654 .. 1588672 -  -6.6  -3.87149   CCGAGGAAATCGAAA             CCCATCGC GGG GCGACCGG             CGCGGCCAAGCGCAC  65 126
   Dshi_1525 1586095 .. 1586106 -  -7.2  -3.07113   CAGGATCGCACCGAA                CCCG TCAG CGGG                 CCGTCATGCAGGCGT  54 43
   Dshi_1524 1585331 .. 1585349 -  -4.4  -2.81223   CGGAAGAAGAGATCA             CCGGCGAC ACC ACCGCCCG             CCTGCGCGATGTGCG  44 140
   Dshi_1522 1582873 .. 1582894 - -17.3  -4.18018   CGCCCTCATGGAAAA           CAGCCCGGG GATG CCCGGGCTG            CTCTGGTAATGTCAA 100 45
   Dshi_1521 NONE
       livF2 NONE
   Dshi_1519 NONE
   Dshi_1518 NONE
   Dshi_1517 1578520 .. 1578542 - -11.9  -4.26188   TTGAGATAGGGAAAA           CGCGCCTGC GGGTG GCGGGCGCG           TTAACCTTAATACCT  91 51
        hisI 1577434 .. 1577466 -  -4.7  -2.62184   GGTGGTCGCAGATGA      TCGAGTTGCCCGTGG TGG CCGAAGGCAACCTGA      CCACCGCCGCGGTCG  42 148
   Dshi_1513 NONE
   Dshi_1512 NONE
   Dshi_1511 1573119 .. 1573134 -  -3.3  -2.86682   AATGAGAACAAAGAG              TCAAC AAACAG GTTGA               GGAGGTCGAGATGTT  42 333
        mnmA 1566238 .. 1566251 -  -5.2   -5.4505   GTTTGCAACAAAAAA               CCGC ACGGGA GCGG                GGATGGGCGGCGTGT 100 93
   Dshi_1505 1564588 .. 1564605 -  -8.3  -3.86015   GATCTGGCGGAGAAA             CGCGCGG CGTT CCGGGCG              GCGGACCTTGCGCTT  68 373
        miaA NONE
   Dshi_1491 1550815 .. 1550833 -  -4.5   -2.6999   CCAAAAGCGACATCA             CCCCCGA AACGG TCGAGGA             TCAAAGCGGCTTGAC  42 58
   Dshi_1490 1548897 .. 1548924 - -20.6  -4.32034   GGATCAGGAGCAAAA        GACCGGAGCCCG ATGG CGGGCTCCGGCC         GGTGTCGTGCGTCGC 100 42
   Dshi_1489 NONE
   Dshi_1488 1546542 .. 1546552 -  -2.4  -3.34398   TTTTGTGCTGAAATA                 CTCC GGG GGTG                 TGGGGGCAGCGCCCC  45 56
   Dshi_1487 1544345 .. 1544360 -  -6.8  -2.52464   TGTTGTCGCAATCCA              TGGGAC GTTT GCCCCA               TGGGCGGATGGCCCG  48 97
   Dshi_1486 1542251 .. 1542271 - -18.3  -4.72272   TGTGGCCACGAAAAA            GGGCGGGGA AGA TCCCCGCCC            TGTGTCCTTGTCAAA 100 50
   Dshi_1485 1539681 .. 1539692 -  -7.2  -4.07687   ACGCGTTTTCGAAAA                CGCG TGTT CGCG                 GGATGCCTCAGCCGC  70 33
   Dshi_1484 1538772 .. 1538797 - -11.1  -2.78384   TCTTTCGTGACGATA         GCGGCG-GCACA GGC CGCGCGCGCCGC         CTTGTCCTTGTCGGC  63 135
   Dshi_1483 1538238 .. 1538253 -  -2.4  -3.40403   TTGGCGCTAGCACAA              CGCCCG TGCC CGAGTG               GCGGAATTGGTAGAC  47 147
   Dshi_1479 1533986 .. 1533999 -  -3.8  -3.53224   GACGGGGCCGCGAAA               TGGG CGTTGT CCCA                GAATGGGACAAGACG  51 55
   Dshi_1478 1533358 .. 1533395 -  -5.4   -3.6502   CACGCTGCACTGAAA   TCGCCCCGAC-CGGGCG CTGTC CGACCGCGTCGGATCGC   TGTCGGACAGGTGTC  55 113
        gyrA 1530087 .. 1530097 -  -8.2  -2.52676   GACCGGGGGAACGGA                 GCCC GTC GGGC                 TCCGTCTATCACCTG  53 81
         gid 1528603 .. 1528619 -  -2.1   -2.5664   CATCGAAGGATCAAT              GGGTTGC AAC GCGACCT              TGACGCCCGATCACT  38 36
   Dshi_1474 1527708 .. 1527721 -  -5.9  -3.55622   CCCAACTCTGCGAAA               CCCGC ATCC GCGAG                GCGTTTCACGCAGAA  56 31
   Dshi_1470 1525147 .. 1525190 -  -6.7  -3.34715   GACCTCTTTCAAATA CCTGGTGGAGGGTGACGGCACG ATC CGCGCC-TGACCC-CC-CCGGG CCGCTCAGACACTCA  55 30
   Dshi_1458 1515912 .. 1515925 -  -3.8  -4.20918   GGCAAGGCCAACAAA               GTGG GCAAGA CCAC                AATGGCCGAGGCTCA  65 73
   Dshi_1454 NONE
       ssuA2 NONE
       ssuC2 NONE
       ssuB2 NONE
   Dshi_1450 NONE
   Dshi_1449 1506370 .. 1506385 -  -4.6  -2.98072   GCTATTACAAGCAGA              TCGGGC TGAT GCCCTA               ACCTAGGCGGACCCA  47 418
   Dshi_1447 1505562 .. 1505574 -  -6.9  -4.68384   ATGCATTCAACAAAA                GCCGA CTG CCGGC                GCTGCATCAGGATCT  81 72
   Dshi_1439 NONE
   Dshi_1438 1493770 .. 1493794 - -22.9  -2.70932   TCGCGCGTGGAAGGA          GGCGGCACCGG GGT CCGGTGCCGCC          CATGGGAAGCGAAAG 100 43
   Dshi_1437 NONE
   Dshi_1436 NONE
   Dshi_1435 1490384 .. 1490401 -  -4.1  -3.35679   TGGCGTGATCTACAA             GCTC-GCC TTT GACTGAGC             TTCTGACGGCGGCCC  48 2
   Dshi_1431 1487078 .. 1487090 -  -2.6  -2.91274   GCGAGGCCAAGGATA                GGGC CCGGC ACCC                GGTATCGGCAATTCC  40 70
   Dshi_1430 NONE
        fabG 1484658 .. 1484683 -  -4.6  -3.64703   CTGGCGGTAGTCAAA         GACAGCGCGC TCCAGT GCGCCATGTC          CTGCGGATCGAAAAT  55 129
   Dshi_1428 1482949 .. 1482972 - -17.4   -4.8622   CGTTGCAACGAAAAA          CCCCGCCCGC AGGC GCGGACGGGG           TCAGGAGTGGTGGCG 100 55
   Dshi_1420 1471999 .. 1472013 -  -4.2  -3.44622   GAGCTTTACAAGGAA               GCGC TCGGCAT GCGC               TGAGGCCGCGCGGGG  51 45
   Dshi_1418 1471361 .. 1471375 -    -7  -3.29144   CGACCGGGGCGAGAA               GGTGCC GCC GGCCCC               TTAGGCGAGGAACAC  55 26
   Dshi_1410 1464632 .. 1464648 -  -5.7  -3.53012   CGGCGGTGCTGGAAA              GCCCGGC GGA GCTGGAC              GCGGTGTTGTGCAAG  54 365
   Dshi_1404 NONE
   Dshi_1403 NONE
   Dshi_1402 NONE
   Dshi_1401 NONE
   Dshi_1400 1453499 .. 1453536 - -10.4  -3.53343   AATGCGCCCCCGAAA   CGGCCGCCCGACCGCG TCGGAT CGCCGTCGGGCAGGTG    TCGGACATCTGTCGG  68 108
        acsA 1451365 .. 1451382 - -14.1  -4.19735   GGGGGGAAAAGGAAA             GGGCCGG CAGA CCGGCCC              TTTTTCATGTCGGAT  93 56
        accB NONE
        accC 1447079 .. 1447097 -  -4.5  -3.78934   CCCGGTCCAGAAGAA            CCG-CGCG CGCC CGCGTCAG             ATCTGCGCCGTCTCC  56 22
         aat 1446324 .. 1446336 -  -6.2  -3.02263   ACACGCCCCGCAAGA                GCGC ACGAA GCGC                CCGGAATACGCGGGC  49 52
   Dshi_1393 1445312 .. 1445337 -    -6  -3.56643   TCGAGACCCTGGAAA         TCCCCGCCGG TGAGGC CCGGCAGAGC          GGTCGGCTCAGCATC  56 296
        clpP 1441854 .. 1441873 -    -5  -3.54543   ATCGATCCGGTCAAA            TCG-AGCCA TCC TGGCCGCGA            GGGGGGCGCGTTTCG  55 172
        clpX 1440487 .. 1440510 - -19.6  -4.72272   TGCGCGGATGAAAAA          CGCCGCCCTC CTGC GAGGGCGGCG           TCCGGTGATTGGTCG 100 68
   Dshi_1386 1438985 .. 1439003 -  -9.6  -2.87564   TGATCGCCGCACAGA             TGCCCTGA GCG TCAGAGCA             GCTCCTGCACCAGCT  58 18
   Dshi_1384 1437305 .. 1437333 - -17.4  -2.64973   ACGAACTTCACAGGA        TCGCGCGCCCCG TATCC CGGGCCGCGCGA        CAGGTCTCGACAGGC  83 46
   Dshi_1383 NONE
   Dshi_1382 NONE
   Dshi_1381 NONE
   Dshi_1380 1432942 .. 1432959 -    -4  -4.13014   CCCACATTTTGAAAA             CCGCGG GTCACT CCGCCG              CCGTCATCTTCGGAT  63 15
   Dshi_1379 NONE
   Dshi_1378 NONE
   Dshi_1377 NONE
   Dshi_1376 1429669 .. 1429690 -  -6.5   -3.5393   ATGACGGCGGCGAAA           CCGGCCCCTG CAT CATGG-CCGG           TCCCTCCTGCGACAG  56 251
   Dshi_1365 NONE
   Dshi_1364 1417549 .. 1417576 - -10.5  -2.64472   CATGGTCGAAATGCA        GCCGG-GCGAGG TCGAT CCGCGCACCGGC        AAGGTGGTCGAGAAG  57 111
   Dshi_1360 1411843 .. 1411861 - -11.6  -4.07568   TTGCGGGTGGGAAAA             TGCCCGGC CCC GCCGGGCT             GCAGGGAGCGATCCG  83 439
   Dshi_1352 1403213 .. 1403230 -  -7.7  -4.48902   AGAGATGGAAACAAA             GATGGCCG CGT CGGCC-TC             ATTTGTGCCTGTTTT  81 469
   Dshi_1349 NONE
   Dshi_1348 1400014 .. 1400025 -  -2.2  -2.87211   ATGCCCTTCTATATA                GGACG TTC CG-CC                GCAGGGGGGAGAGGG  40 45
   Dshi_1347 1399384 .. 1399400 -  -7.9   -4.0371   CATGCCCGACACAAA              GCCGACG CTG CGCCGAC              CGGTGCCCGCAGGGC  70 41
   Dshi_1342 1395392 .. 1395411 -    -7  -3.30124   GCGCATGGCCGACAA            CATCGCGC TGAT GCGCGGCG             GCAAGATCGTCCAGC  54 472
       uspA1 1391152 .. 1391185 -  -8.7  -2.90075   TGCCCGGCAATGACA     GCGCCGAGACGGTCG GCCT CGACGGCATCCGCGC      CAAGCACGCCTGGTG  54 301
        prfC 1389236 .. 1389255 -   -15  -4.00532   TGTGGAAACAGGAAA            GAGCCGCG GCAA CGCGGCTC             TTTTTTTGCGCGGTG  93 71
   Dshi_1334 1385976 .. 1385990 -    -7  -3.54129   GATATTCCGGTCAAA               CGCTGC GCC GCCGCG               GTCGCGGATAGCGCG  59 222
        rhlE 1384130 .. 1384158 -  -7.4  -2.73875   GCTGGTGGAATACGA       GGTGGGC-CAGGT GTTG ACCCGTGCCAACC        GCAAGACGCTCGACG  51 242
   Dshi_1306 1359846 .. 1359876 - -14.7  -3.26433   CAACCAGACCATCAA      TGCAGCCACCGGCG CGCT CGCCGG-GGCGGCA       GTGGGCAACCAGATC  78 129
   Dshi_1299 1352810 .. 1352832 - -12.7  -4.57569   TCACGGCGCGAAAAA           GGGCGCACC GCGTG GATGCGCCC           CGGGATGTGCGGCTT 100 50
        glmU NONE
        glmS NONE
   Dshi_1292 NONE
   Dshi_1291 1344500 .. 1344516 -    -5  -3.53012   CGGCCGCCCGCGAAA              CCCCGG TGTTT CCGCGG              TCGGATACCTGTCGG  53 113
        moaA 1343262 .. 1343274 -  -6.2  -3.12351   TGGCCCGATACGCAA                CCGG TTGAC CCGG                CAAGCCGCAGGATTC  51 112
   Dshi_1287 1339857 .. 1339882 -  -9.7  -3.01712   CGGGTGTCTCCAAGA         CGGTGCTGACCG CCG CGGTCA-CTCCG         CTGGTAGTGCTTGGG  60 18
   Dshi_1280 1328794 .. 1328831 -  -8.9  -2.79183   GCCACCGCGACCACA   CCCTGCACCCTCGCGGT CTGC ACCGCCCCGGCGCGGGG    CAATCACCCCGTGCG  52 517
   Dshi_1273 1322706 .. 1322746 -  -4.6  -3.38768   CGAGATCATCGAGAA GGGCGAGGCGGGGCTGACCT CCG AGG-C-GCAGCGCCTCAGCC GCGTGGCCATCGCCC  51 262
        iolD NONE
        iolC NONE
        iolB NONE
        fbaA NONE
        idhA NONE
   Dshi_1263 1312347 .. 1312386 - -10.6  -3.57144   TTTTGCAGCGCGAAA  CGTG-CCAGGTCCAAGGGC TCA GCCCCCGATCCGGGTCACG  GGACGCACGCGCATC  70 4
   Dshi_1262 1309195 .. 1309211 -  -2.2  -3.14132   GTCCTCGGTCACCAA              GCGC TACGGACCC GCGC              CGCTGGCCTTCATCG  42 121
   Dshi_1257 1303431 .. 1303451 -    -9  -2.62184   GCGTGGGGGATATGA           TCGC-GGCC TTCG GGCCCGCGA            GTTTCTTGCCACTGC  54 509
   Dshi_1252 1299132 .. 1299144 -  -3.3  -3.09749   TATGTTCAACACAGA                GCAGG ACG CATGC                GTTCTGTTTCGGTAA  43 136
   Dshi_1251 1298413 .. 1298461 - -10.2  -3.14344   GAGGCGGGCGAGGAA GACCCGATCGCCGAGGGCACGCCC GTG GGGC-TGTCCCTGGCG-CCGGACC GGGTCATGCTGTTCG  62 79
   Dshi_1248 NONE
   Dshi_1247 NONE
   Dshi_1246 NONE
        melA 1292036 .. 1292046 -  -5.4  -3.54741   GAGTATTTGGGCAAA                 GATG AGG CATC                 AGGCGGCCTTGGCGG  55 24
       ilvD2 NONE
   Dshi_1243 NONE
        dgoK NONE
        dgoA 1288012 .. 1288035 -  -2.3  -2.87132   GGCGGTCGTCATAGA          GCGTCG-CGC TCACG GCACCGCCGC          TCCGTAATAGCGCAC  40 11
   Dshi_1240 NONE
        lacZ NONE
       dmsA2 NONE
        dmsB NONE
        dmsC NONE
   Dshi_1230 1272793 .. 1272835 -  -6.4  -3.14564   GCAGGTGCGCACCAA CACCCTGCACGGCCAGGGGATC ATG GA-CCCC-GGC-ACGC-GGGTG GTCATCGACGGGCAT  51 226
        pepN NONE
   Dshi_1222 1263312 .. 1263329 - -11.3  -4.07568   CTGCGCGGCGGAAAA             CCTTCCC CGCG GGGAAGG              TTTTTGTCCCATGTT  82 224
   Dshi_1220 1260592 .. 1260615 - -16.7  -3.85698   TCTGTTCGTGAGAAA          CGCGGGCCG GAAATG CGGCCCGCG           TTTCGTGACCGGCGT  95 47
   Dshi_1219 NONE
   Dshi_1218 NONE
   Dshi_1217 1256857 .. 1256896 - -10.7  -3.51934   TTTTGTGCACAAATA CTCC-CGCCGGAGGCGTCC CGAA GGT-GCCCCCGGCGTAGAG  GTCAGATCAGGCGGC  71 32
        panE 1255640 .. 1255651 -  -7.2  -3.25823   GGGGCTCGACATCAA                GGCG ATCA CGCC                 CGAGGAAATCGCCCT  54 197
        gatB NONE
   Dshi_1206 1244755 .. 1244784 -  -6.4  -4.15044   CGTCGTCGCAAGAAA       GTTGCCTGATCG TTTTAG CGATCACGCAGC        CAAGACTTCAAGGAG  69 295
   Dshi_1204 1243265 .. 1243278 -  -3.8  -2.78463   ACGTGGTGGACGACA               GCGA GAGCCA TCGC                GGTCATGCAGGATAT  41 203
   Dshi_1202 1242409 .. 1242425 -  -7.3  -3.00994   GGAATGGTAGACATA              TCGGACT TAA AATCCGA              AGGCCCTAGTGCCGT  54 87
   Dshi_1200 1240537 .. 1240558 - -10.1  -3.14132   GGGCGCCTGGATGAA           CCAGACCCG GATG CGGGTCTCG            GGCCGGCGCATGATG  62 382
   Dshi_1198 NONE
        dctB NONE
        dctD 1235482 .. 1235499 -  -2.6  -3.15999   GCGCGACACATTCAA             CCAGGC GCACGG GCCTTG              GGCGGGGTGCAAGCG  43 230
   Dshi_1195 NONE
   Dshi_1194 NONE
   Dshi_1193 1230638 .. 1230654 -  -2.1  -4.07568   CGCGGGCGCCGAAAA              CCCGCGA AAA CCGCCGA              CAAATTTTTGCGCGA  57 108
   Dshi_1190 NONE
   Dshi_1189 NONE
        ostA NONE
   Dshi_1187 NONE
        pdxA NONE
        ksgA 1220817 .. 1220840 -  -2.3   -3.8062   GAACCGGCAGAATAA          CCCCGCCCGG TGGTG CCCG-CGGGA          CCACCACGGATCGCC  52 168
   Dshi_1181 1215320 .. 1215340 - -12.5  -3.06696   TCCGCTCCGAATACA            GGCCGGGGA TCT TCCCCGGCA            TCCTCACCCCCGCAA  71 29
   Dshi_1178 1210341 .. 1210355 -  -2.7  -2.78384   CCCCCTTGGATCACA               GGGCC TTGAC GGCCT               CAAGCACCTCTTCCA  39 6
   Dshi_1177 NONE
   Dshi_1176 NONE
   Dshi_1175 1207346 .. 1207369 -   -16  -4.72272   GGTCCGCACGAAAAA          CGCGCCCC-GG TTG CCTGGGGCGCG          GTCCTGTCCATGCAA 100 55
   Dshi_1170 1200391 .. 1200419 -  -2.2  -3.53012   CCGGGCTGGGCGAAA        CCGTGGGCGATC TGCAC AAGCGGCCCCGG        CAATTCGCGGATTTC  48 217
   Dshi_1167 1196507 .. 1196519 - -10.5  -4.14739   TGACCCAGGCGAAAA                CCCGG CCC CCGGG                CTTCGTGGTCATGTG  78 233
   Dshi_1163 NONE
   Dshi_1162 1187934 .. 1187946 -  -6.2  -3.44051   GCTGGATTACGAGAA                GGGC TATCC GCCC                ACGGTCAACACCGCC  55 299
   Dshi_1160 1185716 .. 1185731 -    -6   -2.7566   ATGGAATGGCAAGTA              CCGGGC TTCG GACCGG               AGACGCGGATCATGA  47 443
         rih 1184206 .. 1184220 -  -3.4  -3.53012   GTCCGCGGCGCGAAA               TGCCAG ACC CCGGCG               CCCGTCACAGCCGCG  49 30
   Dshi_1157 1182696 .. 1182709 -  -5.3  -4.27192   AAACCCTTAGCAAAA               TCCTT GCTC AAGGA                TTTTGCGTCGCGCGG  68 46
   Dshi_1155 NONE
   Dshi_1154 NONE
        cysI NONE
        cysH NONE
   Dshi_1151 1177501 .. 1177520 -  -4.2   -2.7362   TGGAAAGAGGACAAT            CAGGCGCGC AGG GCA-GCCCG            GTAGTCATGGTCGCG  42 5
   Dshi_1150 1176547 .. 1176560 -  -3.7  -4.07687   ACCTGTCGGGCAAAA               GGGCC GACA GGCGC                GAAAGACAGGATCAA  61 37
        infC 1175764 .. 1175784 - -16.9  -5.06414   TGCGGGCAACAAAAA            CGCCGCTTG ATC CAAGCGGCG            TCTTCGGTCGTGCCG 100 52
        tldD 1166416 .. 1166445 -  -4.3  -5.51165   AAAACTTTAAAAAAA       TCGCGGACGAAA GTCGTTT TTTCG-CCGCGC       GGTGTTCGTGTTTCG 100 54
   Dshi_1138 1164953 .. 1164980 -    -9  -3.53811   CCGATCCCGCGCAAA        TGGGCGCGCGGC GCAG GCCGCGTACCGA         CGCGCGCGCAACAGG  68 108
        topA NONE
   Dshi_1136 NONE
   Dshi_1135 NONE
   Dshi_1134 1159565 .. 1159581 -  -5.7  -4.19577   GAAGGGCCAAAACAA              GCGGGAC CGC GCCGCGC              AAGGCGAGAAAGTCC  67 76
   Dshi_1132 1158105 .. 1158131 - -18.7  -3.64703   CTTTGCGCATGCAAA         GGGGGCCGCGC GTTTT GCGCAGCCCCC         TCGCGAGTTCCGGTC 100 47
   Dshi_1131 1157661 .. 1157682 - -15.1  -3.68557   AAAAGACATGCGAAA           GGCCGCACC CGCA GGCGCGGCC            TTGTACAGGCGCCGA  90 49
   Dshi_1130 1156628 .. 1156668 -  -7.6  -3.29144   GCAGGCCGGTGATAA CG-CGAAGCGGTGACCATT TTGC AACGGTCACCGCGTCTTCA  TGAGGTCACAGTAGG  58 45
   Dshi_1129 NONE
   Dshi_1128 1154377 .. 1154400 - -18.2   -4.7373   GCATTTGATGAAAAA          GCCCCGCATC CTGC GATGCGGGGC           CCGGGGCTTGCGGCG 100 52
   Dshi_1127 NONE
   Dshi_1126 NONE
   Dshi_1125 NONE
   Dshi_1124 1149407 .. 1149451 -  -3.3  -2.53876   CTTCATCCGAAGGGA CGTCCGTGCACGCTGCCATCA GGC CGATACCCGCGAGCACGAGCC AGACCATCGGTCGTC  39 52
   Dshi_1123 1148841 .. 1148856 -  -2.4  -2.73159   CCAAGGCCTGCAAAT              GGCGCA TTGT CGCGTC               CTTCAACTGCTCTGG  39 64
   Dshi_1122 NONE
   Dshi_1121 NONE
   Dshi_1120 NONE
   Dshi_1119 NONE
   Dshi_1118 NONE
   Dshi_1117 1142460 .. 1142471 -  -2.2  -3.34894   AACGGGTCTGAAACA                GAAG GTGG CCTC                 GGGTCAATGGCCGTT  45 67
   Dshi_1102 1129407 .. 1129428 - -14.4  -4.27316   GCGCCTAACGCAAAA           GGCGCGCC AGTGCG GGCGCGCC            TTTTTGTTTTCGGAG 100 49
   Dshi_1097 1124815 .. 1124832 -  -8.3  -3.48395   ACGGGGCGTAGACAA             CCGGCGC GGCC GCGCCCG              GATCGCAGGCTCGGT  63 90
   Dshi_1096 1123813 .. 1123838 -  -5.3  -3.40403   GTCGCGGGATCAGAA         CACCTGCTACCG CTT CGGGCGC-GGTG         TCCAGGCGGGGCGCG  53 258
   Dshi_1085 NONE
   Dshi_1084 1112431 .. 1112468 - -15.5  -2.87344   TATGGGGTTCAGATA   GGCAGGCTGCCCCGCCC GGAC AAGCCGGGCAGGCTGCC    CCGCCCGGACAAGCC  79 57
   Dshi_1083 1111899 .. 1111941 -  -4.2  -3.17075   GGTTTCCGAATTCAA GACTTAAGCGGACGGTA GCAAGGGATT TGCCGCCCGCC-AAGTC ATCAGTTCGTTTCAG  47 37
         ate 1110559 .. 1110578 -  -6.4  -3.61517   ATGTTCTGCGAAGAA            TACGGCTGC GAC GC-GCCGCA            AGTGGCCGCGCAGGA  56 472
   Dshi_1075 1104343 .. 1104369 -  -7.3  -3.01924   CATGTCGCGCCAATA        GCCGGCACG-CGC GCG GCGTCGTG-CAGC        AGGGGGCGCCGTGCG  54 54
   Dshi_1074 1103041 .. 1103062 -  -7.9  -2.62983   CGGATTGCGACATGA           CCGACGCCG TCAC CGACGCCAG            GGCCCGGTCAGGAGG  51 33
   Dshi_1073 1102255 .. 1102268 -  -5.2  -4.06687   ATCGGTCAGAAAGAA               GGCC TCAGCT GGCC                GCCAGCTGGTTGTGC  63 16
   Dshi_1072 NONE
   Dshi_1071 NONE
   Dshi_1070 1100877 .. 1100891 -  -5.6  -3.53761   CAAGCGGTTTCGAAA               CCGCTT GGC AGGCGG               CGGGCGCTGCGCTCG  55 171
   Dshi_1068 1099788 .. 1099809 - -14.4  -3.34043   GGGATCATGCCACAA           CGCCCCGG TCTTGG CCGGGGCG            TTTGTATTTGAAATA  82 60
        rufX NONE
   Dshi_1063 1096933 .. 1096975 - -10.5   -3.6502   CAGTTTTCATGGAAA GACCCCCGGTGACACCGC GGACATAG GCGGCGCC-CCGGGGTCC GGCAAGTGGCGTCGC  70 57
   Dshi_1062 1096268 .. 1096278 -  -8.2   -3.1355   CGCAGCGATACGCAA                 GCGC CGC GCGC                 TGCGCAACCGTCCGC  58 57
   Dshi_1061 1095349 .. 1095377 -  -5.9  -3.06915   ACCCAGGTCATGGAA       CCGGCCCTGCGC AGCCGA ACGC-GGGCCCG        TCCGTCGCGCACCAC  49 53
   Dshi_1060 NONE
   Dshi_1059 1092515 .. 1092543 -    -9  -3.62591   TCGACAACCTCGAAA       TTCC-CGCCGA-CA CCC TGATCGGCGAGGAA       GGCCGCGGCTTCCGC  68 516
   Dshi_1051 NONE
   Dshi_1050 NONE
   Dshi_1049 NONE
   Dshi_1048 NONE
   Dshi_1047 1080492 .. 1080537 -  -2.3  -2.71712   GGCCGTGGCCGAAAC GGCGCAGGTGGTG-CAGCTTGC CCC GCAAGCGGACGTGGCCTGCGCG CCCGAGGTGCAGACG  38 508
   Dshi_1043 NONE
   Dshi_1042 NONE
   Dshi_1041 NONE
   Dshi_1040 1072703 .. 1072717 -  -2.8  -2.64099   GGCCCCGATGACAAC               GATATG GGT CATGTC               TCCTCCTTGGTGGGG  39 19
   Dshi_1039 NONE
   Dshi_1038 NONE
   Dshi_1026 1061725 .. 1061744 - -12.1  -4.29325   CACGAACACGGAAAA            GCCCCGC CATCGC GCGGGGC             TTTTTCATGGCGGGT  91 30
   Dshi_1019 1053686 .. 1053709 -  -5.1  -3.53012   GGGGGCTGGCGCAAA          CGGTCCGGC GACTGA GCCGGGGCG           GGTCAGGCCGCGATC  53 28
   Dshi_1016 NONE
   Dshi_1015 NONE
   Dshi_1014 NONE
   Dshi_1013 1046948 .. 1046958 -  -4.6  -3.14132   CCGCTGCGCCAGGAA                 GCCG TTG CAGC                 GTCGGTGGCATGGGG  48 64
        metK 1045600 .. 1045625 -   -14  -2.84325   CTGTCGGAAATACCA         GGGGACGGGC TGTGTG ACCCGTCCCC          GTTTCTTTTGCGCAA  74 125
        fabA NONE
        fabB NONE
       fabI1 1042277 .. 1042288 -  -3.6  -2.52464   TCGCGGGTGAACTCA                GGCA TCGC CGCC                 CCGCTCAGATGTTCT  39 30
        catD NONE
   Dshi_1006 NONE
   Dshi_1004 NONE
   Dshi_1003 NONE
       metB1 1035433 .. 1035470 - -12.5  -2.52464   CTCCTCCCGAAGGGA   GGCGCGGCGCAGCGCCC CGCG GGGTGCCACGCCGTTCC    TCCTCCCGCCCCGAG  67 96
       serA2 1034399 .. 1034434 - -12.4  -2.54896   GCTGGAGGTAAGGTA    GTCCGCCCCCCGGTCG CGGT CGACCGGGATGCGGTG     GGGCTGGGCAGGGGG  65 49
       fadD4 NONE
   Dshi_0999 1031736 .. 1031748 -  -4.7  -2.78384   CCTGCCCTCAGCAGA                CACCG GCG CGGGG                CAGGGTGCAAGTCAC  44 37
         ade NONE
   Dshi_0995 NONE
   Dshi_0992 NONE
   Dshi_0991 1013964 .. 1013974 -  -5.4  -3.87994   AGTGACTTGCAGAAA                 TGTG AGA CACA                 AGACACCGCAATGGC  60 146
   Dshi_0990 1008910 .. 1008933 -  -7.4  -4.14739   GCATGCACGCGAAAA          CGCCAATCAC GTCA GTGACTTGCG           GCACTCGTGGCAGGC  72 295
   Dshi_0989 NONE
   Dshi_0988 1006936 .. 1006946 -  -8.2  -3.57561   CTGGAACTCGGCAAA                 CGCC TCG GGCG                 AGAGCGTTGAGGCTT  65 136
   Dshi_0987 NONE
   Dshi_0986 1005810 .. 1005833 -  -3.1  -3.03124   CGGTAGGCTGCAACA          GGGTGAGCT TGCCGG AACTCATCC           AAATAACATCTGCAA  43 201
   Dshi_0985 1005484 .. 1005507 -  -6.7   -2.7083   CATGTGACAAACTCA          GCCGTGG TTATGGCGCC CCACGGC           GGGCGGATCGAACCA  49 92
   Dshi_0975 NONE
   Dshi_0974  995233 ..  995265 - -18.4  -2.93853   TTTCGGGAATGAAAG     TCCCGGGGCGCG-GG CCAA CCGCGCGCCCCGGGG      GGAGGAGTGCTTAGC  90 36
   Dshi_0973 NONE
   Dshi_0972 NONE
   Dshi_0971  992446 ..  992462 -  -2.1  -3.79747   GGATGCATCAGGAAA              CCCGCAG GCC CTGGGCG              TCGAACTTGTGCAGC  52 1
   Dshi_0970 NONE
        mtlK  990023 ..  990036 -  -3.7  -2.91593   CAGGGCGGGAGAAAT               CTCGC AGAT GCGCG                CATGGGCAGACCATA  43 437
   Dshi_0967  988534 ..  988558 -  -4.9  -4.07885   GATCTGGTTTGAAAA          CCCGGACATCG CAC CCACGTCCAGA          CCCATGGCACGGGCC  63 516
   Dshi_0965  988019 ..  988038 -  -8.5  -2.87344   GATCCCTTCGAGATA            GCGCAGG TTCATG CCCGCGC             CGGCGACCTTGGTCC  55 14
   Dshi_0964  987022 ..  987046 -  -5.5  -3.54543   AGTCACGGCGGCAAA          GACCGCGTTGG CCC CCACCGTGGGC          ATGCCGATCCCCCGG  57 343
   Dshi_0961  985487 ..  985499 -  -6.2  -3.15999   GCCCGAGAGATCGAA                CCCC TCGGC GGGG                AAGGTGCCCGCGGGT  51 60
   Dshi_0959  983695 ..  983706 -  -2.2  -3.59315   GGAAGCACGGCTAAA                GCTC GTCG AAGC                 GCCGGTGACTTTCCT  49 9
   Dshi_0958 NONE
   Dshi_0957 NONE
   Dshi_0956 NONE
   Dshi_0955  979628 ..  979657 -  -8.5  -3.14211   ATGGGGCTGGAGGAA       GCCGGGCTCGATC GTCT GATCAAGGCTGGC        TACGCGCTCTTGCAC  56 335
   Dshi_0953  977231 ..  977249 -  -2.4  -2.71791   AGGGCGCGCGGAAAT             CAATGC CCGATCT GCATCG             CAGGTGCCCTGCCCG  39 6
        trpA  976259 ..  976300 - -10.1  -3.53811   CCGATCGCGCCCAAA CCCGCCCCGCGACACACGCG GAT CACATGTTTCGTG-AGCGGG CGTTTCGGGGCCGCA  70 101
   Dshi_0951  975228 ..  975245 - -12.7  -3.84246   CCTGGAACGACGAAA             GGCAGCC CTTG GGCTGCC              TTTTTCGTTGTGGGA  83 192
        pthA NONE
   Dshi_0946  971104 ..  971114 -  -6.8  -5.00616   GCTGCGGTGAAAAAA                 GACC GCT GGTC                 ACACTCGGGTGCCTA  86 234
   Dshi_0945  970252 ..  970278 -  -2.1  -3.59262   CCGGAGATGCGCAAA         CCCGGTCACAT GCCCA ACGCGGCCTGG         GTGTTCGGCCCGACG  49 4
   Dshi_0944  969735 ..  969762 -  -4.7  -2.90075   GTGCGCCGAACCACA        CGCCCGCTCAG CCATCC CCGAGCGCCCG         GACCGCGGCATCGCG  46 5
   Dshi_0943  968445 ..  968480 -  -8.9  -3.28712   GGTTTGGCCGGATAA    CGCGGGGCGCAGC GCGCGCCTTG GCCACGCCCCCCG     CCGCCCCGACCCCGA  60 70
   Dshi_0939  965407 ..  965423 -  -3.6  -3.02511   CGCACTTGCGCAAGA              GCTGGG ATATG CCCACC              AGTCCGCCCTGACGC  44 393
   Dshi_0937 NONE
   Dshi_0936 NONE
   Dshi_0935  960223 ..  960239 - -12.3  -2.57721   TAATCGACGAACTCA              GCGATCC GGA GGATCGC              ATTGCTGGCAGTGTT  65 44
   Dshi_0933 NONE
   Dshi_0932 NONE
        adhA NONE
   Dshi_0930 NONE
   Dshi_0929  952281 ..  952306 -  -7.5  -3.48276   GTGTCGGGTAGAGAA         GGTGCGG-CACG GGT CGCGTCCCCACC         GCCACTATCACCCTT  60 292
   Dshi_0928  950817 ..  950846 -    -5  -3.73936   AAACTGGAGGAAGAA      GCGG-CTCTCAGGT CAGA ACC-GAGCGACCGC       CCGCATGTCCTCCGA  58 8
   Dshi_0927 NONE
   Dshi_0926  949351 ..  949396 -  -4.5  -4.10453   GAAACCCCGCCAAAA CTGCGCGTCCTGTCTCCGTCG CTAT CGAGCGAAACAGAGTGCGCCG AGCCCGGCATGGCGA  61 299
   Dshi_0924  947977 ..  947987 -  -2.4  -3.88291   GATCAGGCGCAGAAA                 TCCC ATC GGGT                 CCTCCGTCAGTTGGT  54 32
       dacC1  946776 ..  946804 -  -5.9  -3.53811   TCGATCCCCTCGAAA        CTGATGAGGCGGC CGG GTTGCGTCATCAG        TTCGCGGCCTGAGGC  57 22
         tmk NONE
   Dshi_0921 NONE
   Dshi_0920 NONE
   Dshi_0919  943407 ..  943424 -  -2.5  -3.05268   GAAGGATGGTCAAGA             CGCGGGC ACCG GCCGGTG              CAGCACCATCCCGTC  41 2
   Dshi_0918  942223 ..  942275 -   -14  -3.06815   AGCCCGCGGAATAGA CGGAGAGGGCGGCGGGGGCGCTGCTC CCG GCGCTGCGCGCC-ACC-CCCCCCCCG GAGTATCTTTGCAAA  75 222
        thiD NONE
        thiO NONE
   Dshi_0913 NONE
        thiG NONE
        thiE NONE
        thiF NONE
   Dshi_0909 NONE
   Dshi_0908 NONE
   Dshi_0907 NONE
   Dshi_0906 NONE
   Dshi_0904  927554 ..  927608 -  -7.2  -2.52543   AGCGGGCGCAACTGA TGCAG-TCGTTCCGCAGCACGGT GGAACGGCTG ACCGCCCTGCGCAACGAGCAGCA GACCTATCTGTTGTC  47 252
        cysK  906399 ..  906414 -  -3.9  -2.94099   CGGCGCGATCACACA              GGACG ATGTCA CGCCC               ATCGGCAAGGTGATC  43 278
   Dshi_0886  900850 ..  900893 -  -4.5  -4.07885   CACCCTGTTCGAAAA TCCGCGCCATC-CCTACACGC AGAT GC-TGTTGGCGGCGGCGCCGA AAATGGACGGGTTCG  62 214
   Dshi_0883  898288 ..  898310 -  -4.7  -3.37882   GAAGAACAAGGAATA           CGTGCAGGC CGCCC GCCTGATCG           GGCGCGGCTCCGGCG  51 335
   Dshi_0880  895623 ..  895660 - -26.3  -3.28712   TGCTTGCCGTGACAA   CGCGGCCCCCGGTGCCGG GGT CCGGG-CCGGGGGCCGCG   CGCTTACTCGAAATT 100 29
   Dshi_0879  894783 ..  894794 -  -5.8  -3.29829   CAGATGCCGTCACAA                GAGC TAAT GCTC                 TGATAATGGTTAGTC  52 420
   Dshi_0878  893686 ..  893725 -  -8.4  -2.57795   GTGACGATGAACTGA  GCCCCCCGGCGGCGCACCC TTC GGCTGCGCCGCCGATCA-C  AGGGGTCAACACGCC  53 373
   Dshi_0871  887976 ..  887993 -  -4.2  -2.84051   CTACCGTTAGGAAAC             TGTTAG TGATTC CTAACA              CCCTGTCGCGTGGCG  44 66
   Dshi_0870 NONE
   Dshi_0869 NONE
   Dshi_0868  883293 ..  883326 -  -5.8  -2.78384   TGGTCTTCGACCATA     TCGGCTGGCCCGAC CTGGCC GCCGGTCCCGACGA      GCCCGGCTTTGCCGC  45 330
   Dshi_0863 NONE
   Dshi_0862  877603 ..  877626 - -10.4  -3.02043   AAGGCTCTTGCAAGA          GCCTTGTCAAG CGC CTTG-CAAGGC          GCTTGGTCGCCCCGG  62 55
   Dshi_0861 NONE
   Dshi_0860 NONE
   Dshi_0859 NONE
   Dshi_0858 NONE
   Dshi_0857 NONE
   Dshi_0856 NONE
   Dshi_0855  866862 ..  866886 -  -7.8  -3.84406   GGTCGAGGACAAGAA         GCGCGGGC-TG GTGG CACGCCTGCGC          AAGACCGGGGACGTG  66 421
        deaD  859616 ..  859633 -  -9.8  -4.53034   TGTATACAAGCAAAA             GGCGCC TTTCGG GGCGCC              TTTTTTCGTGGTCCG  95 45
   Dshi_0848 NONE
       pyrD2 NONE
        arsC  856118 ..  856133 -  -3.2  -3.07816   GCTGTAGGCAGCCAA              GCGGTT TCGA AATCGC               TTGGCCCGGCTCAGA  43 36
   Dshi_0842 NONE
   Dshi_0840 NONE
   Dshi_0839 NONE
   Dshi_0838  848287 ..  848336 -   -15   -3.0263   ATGACCGTCGCAAGA GAAGT-CGCCCCTGTCATCCCGC GCAAG GCCGGAGGGCAGGGGCGCACTCC CATCTTCTTTTGTGC  78 98
   Dshi_0837 NONE
        fadA NONE
        fadJ  843997 ..  844033 -   -21  -3.53091   AGTGGCGGCCTGAAA   CG-GCAACAGGCCCCGC CGGG GCGGAGCCTGTTGCGCG    GCGCGACGGGTGCCG 100 43
   Dshi_0833  841000 ..  841010 -  -6.8  -3.53012   GGGGGCGCGGCGAAA                 CGCA GGA TGCG                 CGCCAGGCAGCACGG  57 373
   Dshi_0832  839819 ..  839834 -  -3.2  -3.51825   TCACCTCAACGAGAA              GGGC TATATCGT GCCC               GGTCTCGGGGATGCG  49 68
   Dshi_0826 NONE
   Dshi_0825  830825 ..  830844 -  -2.7  -3.53012   CCGTGTGCTCGGAAA            CCTGCCG GAACGT CAGCTGG             CCGGATAGCCGAGCT  47 18
   Dshi_0824 NONE
   Dshi_0823  827311 ..  827321 -  -2.4  -3.25823   CCCGCTGCATATGAA                 GGCC ATC GGGC                 GTGACGGCACCGTGG  44 488
        glyA  825249 ..  825261 -  -4.7  -2.71712   GCGCGCGCGGGAAAC                TGCCC CCG GGGCT                TCTGGCCGAGCTGTC  43 283
   Dshi_0820  824247 ..  824272 - -10.3  -2.70932   CCCTTGCTGCAACCA         TCCTGCGCCGG GCAC CCGGCTCAGGC          GTCGAGGAAGTCTGT  60 20
   Dshi_0816  822871 ..  822891 -  -5.3  -2.91582   CATCCCATTGATATA            CCTCCCCTT TTG ACGGGCAGG            CTATCATGGTTCGCA  46 44
   Dshi_0815  822413 ..  822463 -  -9.6  -2.87344   CACTTGCCCGACACA TGTCCGACGCGGGCCCGACGGCG ATCCGA CGCTGTCAGACCCGC-CCGTTCA CCTCGATCAGGTTCC  58 9
        mipA  816273 ..  816286 -  -2.3  -3.30203   TTAGGAACAAGGCAA               GTCAC AATA GGGAC                TGCGCGGACCTCCGC  45 46
   Dshi_0807  814754 ..  814769 -  -5.4  -2.75294   GGAAACCGGCGAAAC              CTCGAC CATG GTCAAG               TTGATCCGGGTGTCG  45 383
   Dshi_0803 NONE
   Dshi_0802  808505 ..  808534 -    -2  -2.64616   CCCCGACGGAGATCA       GCGTGACAAGCG TGCCAT CGGTCATCCCGC        ATCCCCCCCGATCAC  38 17
   Dshi_0801 NONE
   Dshi_0800  806252 ..  806270 -  -5.3  -4.18197   ATGTCCCATGCAAAA            CCAATCGG GCGT CCG-TTGG             GTTCCCTGCAGCGCC  65 136
   Dshi_0799  805622 ..  805639 -  -2.7  -4.12188   GGATCATCTTGAAAA             TCCTCTCG GAA CG-GAGAA             GCCCCATAGGTGCCA  59 266
        argD NONE
   Dshi_0797 NONE
        argF  802869 ..  802879 -  -4.6  -4.93696   GTCAAAGATGAAAAA                 GGCA GGG CGCC                 GTTAAGGTTAATGCG  80 132
       metB2  800094 ..  800113 - -12.8  -4.34402   GGGCCGACATGAAAA            GGCCCCGC GTCT GCAGGGCC             TTCGGGTCTGGGTTT  95 39
   Dshi_0792  799400 ..  799417 -  -8.3  -3.10796   GTCGATCACCGAACA             GGGCGGC ATGC GCGGCCC              GATGATGATGCGCTC  56 193
   Dshi_0790 NONE
        kefC  793613 ..  793656 -  -7.2  -3.60296   GATGGGGATCGGAAA CACCACCGT-GGCGGCGGCCC TGT GTGCGGCCCTCTACGGCGGCG ACGCGGAGGGGTGGG  58 499
       cobS1  792193 ..  792210 - -12.7  -3.58343   TTCACGATGTTCAAA             GCACGGC TTCG GCCGTGC              TTTTTTCATGTGCTC  77 31
   Dshi_0781  786642 ..  786658 -  -2.1  -2.52464   GGGTCCGTCAAGCGA              TCAGCTC AGC GCGCTGC              CGAGTTTCATCGCCA  37 9
   Dshi_0780  785534 ..  785546 -  -4.7  -4.58395   CTGAGGGTCGAAAAA                GCACG GCG CGGGC                CGGTTCCGCCTCTTG  74 172
   Dshi_0778  784180 ..  784194 -  -4.2  -3.01712   CCGGTTGCGGGAATA               TGTGTG CCG CTCACA               TGCCGCCCGGGGGCG  45 88
        thrS  781939 ..  781949 -  -3.2  -2.71144   GATGCTGCCCAAGGA                 GATC GTC GACC                 GTATCCGGCGGTTGC  40 240
   Dshi_0774 NONE
   Dshi_0773 NONE
   Dshi_0772 NONE
   Dshi_0771  776677 ..  776732 -   -14  -3.54129   GACACGTGCCGGAAA GCCGTGGGTGCGCTGGGCGCGGA ACTGCGCGATA TCCGCGCCGAGCGC-CTGACGGC GGCGGAGATCGACAG  78 197
        csp1  775753 ..  775774 -  -7.3  -4.27441   ACCATTACGAAGAAA           TGCTGAGCCA GGA CGGC-CAGCA           GGGCCTGGCGCGGGA  72 456
   Dshi_0767 NONE
   Dshi_0766  773721 ..  773735 -  -9.2  -3.37493   TCTCGAAGAGATCAA               CACCGC CCT GCGGCG               GATGGAGCGGTACTG  63 146
        aspC NONE
   Dshi_0761 NONE
   Dshi_0760  769799 ..  769820 - -15.9  -4.77036   CGGGACCATGAAAAA           GGCCGATGC GCTT GCATCGGCC            TTTGACATGCAGGTG 100 459
   Dshi_0758 NONE
   Dshi_0757 NONE
   Dshi_0756  766167 ..  766199 -  -5.4  -3.05384   TGCGGCCGCACTCAA     GCGCGGCGGGGCGGT GGCG ATCGCCCTGTCG-GC      GGGGTTCTCTCTGTG  47 411
   Dshi_0749  758321 ..  758340 -    -7  -4.33153   GTTAAGACGAATAAA            GCGGCCGC GCAC GCGACCGT             GTTTTGCGGATATCT  73 57
   Dshi_0742 NONE
   Dshi_0741 NONE
        ppk1 NONE
         ppx  744449 ..  744472 -  -4.4  -3.55548   GAAGAGGCGGTGAAA          CTCGCCGAGC GCAA GCTCATCGCG           ATCAACCGCGCCTGG  52 465
   Dshi_0727  735667 ..  735680 -  -9.5  -3.55622   CTCAAGCCCGGGAAA               GGGCG GGCG CGCCC                CTTGCGCCGTCTGGC  68 66
   Dshi_0724  731836 ..  731869 - -15.3  -2.62184   CCGCCTGCCATACCA     GCGCCAGG-ACGCCTG ATG CAGGCGCGCCTGGCGG     CTGCGCGGGTTATCC  77 35
   Dshi_0717 NONE
   Dshi_0716  723024 ..  723039 - -10.4   -2.5409   ACAAGGTGGAACTGA              TCGCGC AGCT GCGCGA               GAGCAACGCGCATTT  57 211
   Dshi_0711 NONE
   Dshi_0703 NONE
   Dshi_0702 NONE
   Dshi_0701  708137 ..  708150 -  -5.3  -4.07568   CCGCCGGGCGCAAAA               TCCTT GCGG AAGGA                TTTTGCCAAGGATTT  63 44
        pptA NONE
        hyuB NONE
        hyuA NONE
        entB NONE
        prpB NONE
   Dshi_0688  693455 ..  693465 -  -8.2  -3.06261   GGGTAAGGTCGAACA                 GGCG CAG CGCC                 GGGCGCGCTCAGGCC  57 34
       nosR1 NONE
       apbE2  689300 ..  689312 -  -6.9  -2.78384   GCCCCGTGGATCAGA                GCGAG CTG CCCGC                CAATGTGCGCGCCCA  48 178
   Dshi_0682 NONE
        purE NONE
        purK  686654 ..  686692 -  -6.8  -4.26076   TGACCGGGACCAAAA   TCCTTGAGCAAGGATTTT GGC AAAAGTCTTGCTCAAGAC   TTTTGCGCCCGGGGC  73 94
   Dshi_0677  683725 ..  683779 - -10.7  -2.64099   CGGGCCTATCAGAAC GCCCTGACC-C-CGCAATAGGCTGAGC GCG GCTCAGGCCACCGCGCGCGGCCCGAGC TTGGCGTGCACTTCG  62 1
   Dshi_0673  677864 ..  677875 -  -2.2  -3.18023   CGAGGACGAGGAACA                GC-CC GCG GGCGC                CATCGTCAACCTGTC  42 379
   Dshi_0670  675120 ..  675131 -    -3  -3.70417   AGGATAGCACGCAAA                TCTT CGTG AAGA                 AACGGTTTATCCCGG  54 109
       dacC2  673503 ..  673532 - -19.3  -5.28176   CCCAGGCAGAAAAAA       GCCCCGCCAGGAC CTCG GTCCCGACGGGGC        GGTACGCTCCGTGAG 100 53
       hemN2  662893 ..  662923 -  -3.8  -3.91144   TCCAGACTTGAGAAA       GGTTCGGGCGCATC CCC GATGCGCGGGACGC       AACTGAGGCGCGCGT  58 50
       pheA2  655091 ..  655111 -  -2.3  -3.21912   CCTGCAATCGATGAA            GCTGGCGCG GGC CTCGCTGGC            CAAGCAGTATCGCAA  44 162
        dnaX NONE
   Dshi_0649  651285 ..  651300 -  -6.1  -3.28712   GTTCCCGGCTCAGAA              GGGCA GCTTCA TGCCC               TCGGGCAGGTTCAGC  52 4
        recR  650552 ..  650602 -  -9.5     -3.67   TCAAGTCTGAAAATA TCCCG-GGGAGAGCGCGAGAGGGG CTGG CCCCTCTCGCGCCCGGCGACGTGC GGAGCACGGCGCAAA  68 86
   Dshi_0637 NONE
   Dshi_0636  635771 ..  635792 - -10.1  -3.04322   GCCAATGCGTCAACA           GACCGGACC GGAT GGTCCAGCC            CGCGATGCTGGCGCG  62 42
   Dshi_0635  632947 ..  632972 -  -6.1  -2.70932   CCTTGCCCGCAACCA         GGCCAAGC-CGC TGC ACAAGCTCGGCC         AGACCTCGGTCTACA  47 462
        pta2 NONE
        ackA  629376 ..  629391 -  -3.2  -3.01712   CCCTGTTTCTGAACA              TCGGCA CCAG CACCGA               GGCCGTGGCGCAGGA  42 466
        glpD  627282 ..  627296 -    -2  -3.88291   GACGATGGGGACAAA               TCCCGC ACC GCGCAA               GGCCCTTATGCGGCC  54 31
   Dshi_0629  626157 ..  626173 - -12.3  -3.61089   TGGCAACAAGCAGAA              CCACGAG ATT CTCGTGG              AAGGCGACCCCAAGC  74 217
   Dshi_0622 NONE
   Dshi_0621  613690 ..  613729 -   -23  -3.02043   AAGGGCGCGGGAATA  CGAAAACCCCTCCTCCAC GGGT GTGGAGGAGGGGTCTGCG   GCGCGGTTTGATGCG 100 68
       fabG2  612475 ..  612507 -  -9.2  -3.14132   CGTTTTGCTGACGAA     GATCGTGCAGCCTGC ACAG GCAGGGCGCA-GATC      CGAGGAGACGTTGCA  61 378
        pyrF  607443 ..  607492 -  -4.7  -3.26471   TGACCGGGACATCAA CGACGACTGAGCCTTGCCGGGGCA GGC TGCCTCAGCGGGGCAGCG-CGTCG CGGATGGCGCGGGCG  50 7
   Dshi_0612  605189 ..  605208 -  -7.2  -2.78384   TTGTTTCGGATCAGA            GCAGCAGCT GGT AGCTG-TGC            GGCACGTAGCGGAAG  52 1
   Dshi_0611 NONE
   Dshi_0610  603051 ..  603063 -  -4.7  -4.09685   TCTGAGCCGCCAAAA                TGCGC TGA GCGCC                GTGTTGCGCAAGTCG  63 273
   Dshi_0608  600884 ..  600907 - -11.8  -3.52918   GAAGTGTGAAATCAA          TCTGGCCTCTC AAC GAG-GGCCAGA          ATCAACAATTTAAGC  74 61
       dctP5 NONE
   Dshi_0606  599126 ..  599138 -  -3.3  -2.71712   GTGTCCTCCCCAAAG                CGCCC GTT AGACG                TGGGTCTCTTCTTCG  40 19
       dctM5 NONE
   Dshi_0604  596913 ..  596932 -  -4.2   -3.3217   TTGCAAGGATAAAAG            CCCTCGAT GTTA ATCGCGGA             ACGCGATCAAAACCC  48 32
   Dshi_0603  596403 ..  596423 -  -2.6  -3.28912   TCAGATCTACATGAA            GACAAC GCCCGCATG GTTGTC            GCAGTAACCAAGCCA  45 74
   Dshi_0602  595475 ..  595523 -   -13  -3.05463   ACGGGCCGGACGCAA CGG-GCGCCCGGTCCCGGCCCTGC CTG GC-GGCCCGGAGCCACGCGCGCCG GGGCTACTCCCACCA  71 29
   Dshi_0600  591846 ..  591864 -  -4.4  -4.17048   CCGGTTCGAAAAGAA             CCCCCGCG TGG CGCAGATG             TACCGGACCTTCGAC  66 171
   Dshi_0597  588776 ..  588821 -  -9.6  -2.89421   CTAAGAAGCAGGAGA CGCGCAGCACCG-CGCGCGCTG TGGC CAGCGCGCGGCGGAGTCGTG-G ATGAGAACACGTGTG  58 55
        leuA  587018 ..  587029 -  -7.2  -4.30719   CTGGGGCACAAGAAA                GCCC GATT GGGC                 TTGCGCAGGACCGAG  76 86
        mreB NONE
        mreC NONE
       mreD2 NONE
       ftsI1 NONE
       mreD1  581239 ..  581253 -  -4.2  -3.01712   CCTGCGCGGCGAAGA               GGATGC GGG GCATTC               GATATCCTTACCTGG  45 33
   Dshi_0590  580282 ..  580311 -  -5.7  -3.50832   GCCGAAACTGAAATA       GCCGCCGCGC TGACGCGTTTG GCGCG-CGGC       CGGATCAGTAGCCCG  55 30
   Dshi_0587 NONE
        kpsM  577368 ..  577379 -  -4.4  -2.95102   ATCGTATTGATAAAG                TGGA TTGA TCCA                 GGCCGGTATACGGCC  44 98
        kpsT NONE
        kpsE NONE
        kdsA  573643 ..  573672 - -17.1  -3.01924   GACGGCTGGTCAATA       TGGGGCGCGAGAC ACCA GTCCCGCGCCCCC        GGAGGCCCGCTCATG  88 424
   Dshi_0576  565510 ..  565522 -  -3.3  -2.68015   TGCAACGATCACAAT                GGAGC CGG GCTCA                GATCGAGGCTTGGCT  39 269
   Dshi_0575 NONE
        hmuS  563736 ..  563768 -  -2.5  -2.74122   GGTCACGAGAAACAG      GATCAGGGCAAGTCG AAA CATCATGCCGTGGTC      TCCTGTGTCGGCAAG  39 13
        hmuT NONE
        hmuU NONE
        hmuV  560905 ..  560925 -  -6.9  -3.01791   ATGCCTTCGTCAACA            TCAGCGA GAACGCG TCGCTGA            CGGTTGCGCTGAACA  51 172
        exbB  557432 ..  557452 -  -4.5  -3.61178   GGGATCGAGGCGAAA            GCTGGTCAC TCG GCGGCCCGC            TGGAGCGGTTTCGGT  53 10
        exbD NONE
   Dshi_0567  555524 ..  555536 -  -4.7  -3.55444   TGCGCACGGCCCAAA                CGGCG CTG CGCTG                GGACAATCATCTGAT  55 103
       ugpC2  532899 ..  532909 -  -2.4  -3.53012   TGGCGCGCTGTTAAA                 TGGC TCT GCCC                 GCCTCGTCAAACTGG  47 10
   Dshi_0545  531967 ..  532002 - -18.3  -2.64155   TCCGCGTGAAATCCA    CCGAGCTGGAAGCCG AGATCG CGGCCGCCAGCTCGG     CCAAGAAAAAGGCCC  85 167
   Dshi_0542  527991 ..  528003 -  -3.3  -4.58283   GAATTCGGGGAAAAA                CCTGG CGG CTAGG                CTGTGTTAAGTGGTT  69 263
   Dshi_0539  524517 ..  524532 -    -4  -3.14132   CCCTCGCGGGATGAA              CTG-TCG CCG CGATCAG              CTGAGTGCCTCTTCC  47 22
       araF1  515813 ..  515837 -  -9.2  -2.72344   GGGCATTCGCAAGGA         TGAGGGCGGCG CATT CGCCGCCC-CG          TTTTGGTCAGGGGAT  57 40
       araG2 NONE
       araH3 NONE
       araH2 NONE
        dahK NONE
        dahL  510185 ..  510200 -  -3.2  -3.83026   TCGTCGCAGATGAAA              TTGCCA AGGG TGGCAC               TGCTTTGCCTTGGTT  56 462
       araG1 NONE
       araH1 NONE
       araF2 NONE
   Dshi_0516  499835 ..  499872 -  -9.2  -3.20348   TTGATCAAGATCGAA   CCGCTGCATCTGTCGCT AGTCG AGC-ACGGATGAAGCGG   GCACCTCGATAGTCT  61 3
   Dshi_0515 NONE
   Dshi_0514 NONE
   Dshi_0513  498272 ..  498286 -  -3.5  -3.57119   TACACATGGGCCAAA              CCGACG CATG CG-CGG               CCGTTGCCCGATAGA  51 58
   Dshi_0512 NONE
   Dshi_0511  496684 ..  496699 -  -5.4  -3.14132   CGCTTCGTTGATGAA              CTTGGA CTAT CCCAAG               GCATCGCGCACTTGG  48 16
   Dshi_0510  495391 ..  495415 -  -8.5  -2.91383   ATTGTCAGTGACAGA          GCTCTGGCATG CTT CATGGCTGAGC          GGGTCCTCTAGTTTG  55 199
   Dshi_0509  494577 ..  494598 -  -2.1  -4.08216   CCATGCTGGTGAAAA           CCCCGCTTG AACT CATGCAGGC            GCACAATGACGGCTT  57 52
   Dshi_0496  480183 ..  480211 -  -7.4  -3.10715   GGCACCACCATCGAA       CTGGAACCGATCG TCAT CGA-CGGCACCAG        TGGCGCTCTGGCCAC  54 518
   Dshi_0489 NONE
   Dshi_0488 NONE
   Dshi_0487  471200 ..  471211 -  -5.8  -3.97368   TGGCCAACTGACAAA                CTCG GTGC CGAG                 ATCGCATGTGATGGA  65 263
   Dshi_0482  466853 ..  466865 -  -9.1  -4.77165   CCTCCCAGAACAAAA                GCACC AAT GGTGC                GTGGGCCGTCTCACG  93 459
   Dshi_0481  465873 ..  465888 -  -6.1  -3.56092   TCAGTACTGCGCAAA              GCGGT CAGACT ACCGC               GATGGCGGATAACTG  56 156
   Dshi_0472  457408 ..  457418 -  -8.2  -3.28712   CTCGGTGTTCTAGAA                 CGCG ATA CGCG                 GCGGGCGCTGGATGC  58 190
        soxZ  455529 ..  455556 - -14.9  -3.74077   TCTGACAGATGGAAA        GCCGCCGCTACC CTGGC GG-AGCGGCGGC        TTTTGCGTCCCGGAA  88 51
   Dshi_0447  434596 ..  434617 -  -5.1  -3.58343   CGCATCATGCGTAAA           CCGGTGATGA CCG TCG-CACCGG           AGGCATCGGTGCAGA  54 389
   Dshi_0430 NONE
   Dshi_0429  421215 ..  421239 - -21.5   -4.7373   GCAGCGCATGAAAAA          GCCCACCGCTG CGA CAGCGGTGGGC          CTGGCCTAGAACACC 100 51
         pap  415609 ..  415621 -  -9.1  -3.66178   TCTGGGAATTCGAAA                TCGCC ACC GGCGA                TCGCGAGCTGGAAGC  68 167
   Dshi_0414  408131 ..  408146 -  -6.8  -3.38046   GCTCGACCTCAAATA              CCCTGC TCCA GCAGAG               CGCGGAATTGCTCAT  56 306
   Dshi_0411 NONE
   Dshi_0410  403799 ..  403829 -  -4.6  -3.30243   ACCCATGCTCTACAA      GGTCAACGCGCGC ACGTCG GCGCG-GATGGCC       GTTCAGTTCGCGGAC  49 442
   Dshi_0406 NONE
   Dshi_0405  399102 ..  399128 -    -8    -3.322   AGCCTCAGAGATCAA         CCTGCGGACTCT CCG AAAATCCGGAGG         AGAGTCGGGTCTCAG  58 124
   Dshi_0399  390740 ..  390751 -  -4.4  -3.56643   CGGACATTCGGGAAA                CCAA GGGC TTGG                 TTTTGAAGCCGAAGT  53 91
      xerDC1 NONE
      xerDC2  387803 ..  387842 - -10.1  -2.62184   CGGTTTGGTACACTA  GAC-GGGCCCATCCAA GTATAGGCA TGGGATGGGCCCTGTC  TTCCACTTTCGATTG  59 93
   Dshi_0396 NONE
   Dshi_0395 NONE
   Dshi_0394 NONE
   Dshi_0393  383688 ..  383698 -  -2.4  -4.55697   ATGCTGAGAAAGAAA                 GCGC TGC GCTC                 ATTCGGAGGTGTGCG  68 24
   Dshi_0392  381900 ..  381910 -  -3.2  -3.89215   GCGGACAAACTGAAA                 CCGA ACT TCGA                 GGCACACCTCGCGGC  56 404
       rbsB3 NONE
       rbsC2 NONE
       rbsA5  369591 ..  369611 - -10.4  -2.51133   CATCGAGTGACGAAG           CCGCCGCGG GACA CC-CGGCGG            TTTTTGTCATTTGGC  59 177
        hutG  368224 ..  368235 -    -3  -4.58395   CTGAGCGGGCAAAAA                TCTT GCGT AAGA                 TTTTTGACAAGGATT  69 81
   Dshi_0384  365993 ..  366041 -  -8.7  -2.78384   TTGCCCCGCACGACA CCCTCGCGGTTCAG-CGCGCGC TGGACG GCGCGTATCTGAGCCGTGCGGG CGCGGAGACGATGGC  52 427
   Dshi_0377  359709 ..  359723 - -11.4  -4.67943   TCGCAATACACAAAA               CAGGGC CGG GCCCTG               CGGGCGGTGGCCGAC 100 426
       rpoE2 NONE
       chrR1  348700 ..  348716 -  -5.7  -3.25823   CCTGCGGGAGATGAA              GGCCGCG GTG CGCACCC              ATATCAAGGCGATTG  51 503
        arsR  339755 ..  339773 -  -5.8  -2.62263   ACCGGGGCGAGAGCA             CCGCGGGC TTT GCCTTCGG             GATCCTGACCGCGGG  44 359
       azoR1  337290 ..  337322 - -13.3  -3.71649   TGCTCAAAGCGGAAA      GGCACCCGTGGGCGC AAC GCGCTGACGGGTGGC      GATCCCTGCACAGGG  81 285
         ffh NONE
   Dshi_0352 NONE
   Dshi_0351 NONE
   Dshi_0350  333913 ..  333968 - -11.1  -3.53012   GGGCGGCGCGGGAAA CGGCGTCGGTCATGGGC-GTCCTCCG CAGCC CGAAAAACCGCCCAAAACCGGCGTCG GACAAGTGTCGGGCA  71 103
       pheA1 NONE
        rpsP  333186 ..  333205 -  -2.8  -3.53761   TAATCCCTTGCCAAA            CCGTCCGAA TTA CTCGG-CAG            CGGCCTCTTCGGCGG  49 15
        bluB NONE
   Dshi_0346 NONE
   Dshi_0345 NONE
        rimM  331374 ..  331398 -  -9.2  -3.36492   TCTGCAATTGCAGAA          GACCGCCACA CGCCT CGCGGCGGCC          TGACTGCCTGCGGGC  63 48
        trmD  329479 ..  329499 -  -3.1  -3.11634   CCGTATAGGAGGGAA            TGGCCCCCG GAT CAAGAGCCT            TTCATACGCCGTGCC  44 50
        rplS NONE
        rpmE  328610 ..  328629 - -12.1   -4.7254   AGCCCGCATGAAAAA            GGCGCCC ACGAAG GGGCGCC             TTTGCACGATCGAGA 100 52
   Dshi_0339  327477 ..  327492 - -10.4  -3.32844   GTCCGCAGGGCACAA              GCGCGT TCGA ACGCGC               TTGGCACCGGCACGC  66 193
       parA2  325434 ..  325445 -  -5.8  -3.31144   CCCGGACCCCTAGAA                GTCG ACCT CGAC                 GCCCGGCAGGTTCAG  52 8
   Dshi_0336 NONE
        merA  322332 ..  322358 -  -3.1  -2.87931   CTGATCCCTGACATA        CGC-CTGTC-AGA ACT TCTGGACAATGCG        TACGATCCGCTTGAC  42 5
   Dshi_0334  320675 ..  320693 -  -5.9  -3.42366   CCGAAAATTTCAGAA             CCCGCCT ATACG AGGCGCG             GGCCGTTCATGTCAA  55 230
        rpmH NONE
        rnpA NONE
   Dshi_0331  319629 ..  319645 -  -2.1  -3.53012   CGCCGGTGGGCGAAA              GCGGCTG GAT CACCAGC              GTTGTCGCAGCTGCG  47 190
        ydaO  318696 ..  318712 -  -7.3  -2.56596   GGGTGGATCAATCTA              CTTCGGA TTT TCCGAAA              ATGCGTCCGCAAGCC  51 6
        ydaM  317013 ..  317037 - -10.7  -3.54543   AGTCATTTTCCCAAA          TGTGACCACCC GGG GGGTGGCGACA          CGTCCGGAATGCCGC  73 44
        yidC NONE
        mosc NONE
        engB  313532 ..  313557 - -10.3  -3.31248   CAAGATCGTCGAGAA         GCTGCCCCTGC GGCG GCTCGGGCAGC          CCTCCGAGGTGGCCG  63 186
        argB  311920 ..  311957 - -14.7  -3.02511   GCCAGGCGCCGAACA   CGGCCAGGTGGCGCGCCG CGG CGGCG-GCCTCCAGCCCG   GCATAGTCCGTGGCC  78 41
   Dshi_0323 NONE
   Dshi_0322  310761 ..  310809 - -11.1  -2.75064   TCGGCCATTGAAGCA CCGG-CATCGCGCGAAGGCCCCGG CCCC CCGGGGCCTTTGT-C-ATGTCCGG GTCACGCCCAGATCG  63 16
   Dshi_0292  289440 ..  289463 -  -2.3  -3.06696   CGGTCGCGGAACAGA          TAGGCGGCG TGGGCT CTCCGTCTA           TGCCCAGGCGTAATT  41 23
   Dshi_0291  288886 ..  288897 -  -7.2  -3.29144   TTATGGGTGCTACAA                CGGC TTTT GCCG                 CGTTGCAGTGGGTTG  58 148
   Dshi_0281 NONE
   Dshi_0280  281657 ..  281667 -  -2.4  -3.28712   CTCGGGCGCGCAGAA                 TCGG GAG CCGG                 GATCTTGGGGGGAAA  45 137
   Dshi_0279  281084 ..  281108 - -13.6  -3.35996   CATCCTGATTGAGAA         GCCCCGGTCCT GAAC AGG-CCGGGGC          TTCTTGCATCTGGGG  77 54
   Dshi_0257  254676 ..  254731 -  -4.8    -3.767   TATCCATGGATCAAA GCT-AGCCA-GAGCGACGGGGCCGGTCA ACCG TG-CCGGCCCCGT-GCGCATGTTTCAGC CCACCGGCACGCCGG  58 21
   Dshi_0256  254109 ..  254126 -  -4.7  -3.61398   GGCCGCCGCCAAGAA             GGCCCGC GAGG GCGAGCT              GATGAGCGATGACGA  52 318
   Dshi_0254  252688 ..  252715 -  -3.9  -3.53224   GAGGCGGTGCCGAAA        TCCGCCTCGGG CAAGAT CCTGCGGCGGC         TCTTGCGGGCAAAGG  51 100
   Dshi_0251 NONE
   Dshi_0250 NONE
   Dshi_0249  246003 ..  246043 -    -4  -3.34398   GCGGCCCCCGAAACA CGCCCCGAT-CCGCCGACAA ATT TTTTCG-CGGAATCGTGGTG TCCCAAGAGCTTACA  48 97
        rpsU  243693 ..  243714 - -13.7  -4.56978   CCGCGAAACAACAAA           CCCCCG-GGC AAA GCCACGGGGG           TCGTCGTTTCGAACA 100 67
         adh  241413 ..  241450 -  -5.3  -3.14468   TGGCACCATATCCAA   CGCGCCCTGGCGCTG CCCCGGTC CCGCGCCTGGGCCCT    CGCCCTCGGCGGCCC  49 525
        gst3 NONE
        nadX  237471 ..  237507 - -13.7  -3.17723   GCATCCGCAAGGGAA    TCGCCGACGCGGATG TGGTCGT CGTCCGCTTCGGCGA    GAAGTACAAGCAATG  73 247
   Dshi_0227 NONE
   Dshi_0226  223857 ..  223894 -    -2  -4.07568   CCCCCCCCCGGAAAA   CGATTTGCCACAGGAA AGGACA TACCCATGAAAAATCG    TATACTTGTATCCGC  58 441
   Dshi_0224  222026 ..  222058 - -12.1  -3.08996   GATCGCCATGGAAGA     CGGCCTGCGCTTCGC CATCC GCGAAG-GC-GGCCG     CACCGTCGGCGCAGG  69 137
   Dshi_0220  216875 ..  216903 -  -5.9  -4.07568   CCGCGCGGGTGAAAA        CCGCTCAACCGGC CTT GCGGATCAAGCGA        TCGAGCCAGCGGGTC  65 1
   Dshi_0219 NONE
   Dshi_0218  215862 ..  215875 -  -4.5  -3.69216   CGCGCAGGGAAAACA               GGTCA AAAT CGACC                TCAATTCCGTCCGCG  56 153
        eftB NONE
        eftA  214046 ..  214066 - -11.1  -5.44119   GCCAGGCGAAAAAAA            GCCCCGC GCGGCAG GCGGGGC            TTTGTTCTTTCCGGG 100 50
        hbdA  212032 ..  212053 - -15.9   -4.1891   CCCGCCCAAGACAAA           GCCCCGTTC GGCA GAACGGGGC            TTTTTGTGTCTCAGG 100 103
   Dshi_0212 NONE
   Dshi_0211 NONE
        hprK NONE
   Dshi_0209 NONE
        ptsL NONE
        ptsH  205572 ..  205592 - -10.3  -3.59979   GTCCCTCACTGGAAA            GCCGACGCG GGG CGCGCGGGC            GTGTCAGTAGTTCTC  70 29
   Dshi_0206 NONE
        mmgC  201855 ..  201877 - -17.7  -4.18018   GCCGGGCACGCAAAA           GCCCCGCGC GAGTG GCGCGGGGC           TTGGGGAACGCGGAA 100 49
   Dshi_0191 NONE
   Dshi_0190  191133 ..  191147 -  -2.8  -2.79321   CCTATATCAAGAGCA               CCTG GCCGCCG CAGG               TCATCGCGGCCCACG  40 70
        ispH NONE
   Dshi_0187 NONE
        plsC NONE
       cdsA2 NONE
   Dshi_0184 NONE
   Dshi_0183 NONE
        rnhA  185133 ..  185180 - -12.3  -2.74263   ACGCGATTTGGAAAT CGCGTTCCAAGCGCCTTG--CAAG GCG CTTGATCAAGGCGCTTCGAA-GCG CCTTGGGGCTCAGCG  66 35
   Dshi_0178  181488 ..  181503 - -11.8  -2.71364   CGACGGCCTCAATCA              GGCCCG GGTG CGGGCC               GCGCGCCGGGACAAG  62 323
   Dshi_0169  172294 ..  172307 -  -5.3   -4.2558   CAGCGCGCAGCAAAA               CTCTT GAGC AAGAG                TTTTGCCAAGGATTT  68 67
   Dshi_0167 NONE
        cobC NONE
        cobD NONE
       mltB1  167592 ..  167648 -  -3.4   -3.6502   CAGCCGCCAGGCAAA CGCCTGAGCACCCTGAGCCTGCT-GTC GGGC GGCGAGCAGACGCTGACCGCGCTGGCG CTGATCTTCGCGGTG  53 512
        cbtB NONE
        cbtA NONE
        cobW  161922 ..  161933 -  -7.2  -3.69216   TGGGCACCGAAAACA                CCGG CTCT CCGG                 AATGGCGTCAGGCGC  65 139
   Dshi_0159  161212 ..  161248 -  -8.5  -3.14132   GCGCGGGTCTAGCAA    GCCGGACCGGCCCCGGC AAC ACCAGGACCGTCACGAC    CCCTTGGTCCGGGTC  58 19
        cobN  156971 ..  156985 -  -4.2  -3.40141   GAAAAGGCCAAGGAA               CTGATC CGC GATCCG               GCCAACAAGATGGTG  49 506
   Dshi_0154  154119 ..  154154 -  -5.2  -3.53761   CAAGCGGTTTCGAAA    CCGCTTGGCCCGCTGCG GAT CGG-GCTGGCGTAGCGG    GCGAGGGCATGCGGC  53 146
   Dshi_0152 NONE
   Dshi_0151  151136 ..  151158 -  -6.8  -3.30124   CGCCATCGGCTACAA           CGCGGGCCCG GGC CGGTCGCGCA           GTTGGACGGAACGTT  54 254
        dapA NONE
   Dshi_0148 NONE
        smpB  147108 ..  147126 -  -3.8  -4.20516   GCCTTATTCAACAAA             GTGACACA TAG TGCGTAAC             GAGCGTTGCCCCCGC  63 291
        sseA NONE
   Dshi_0145  144909 ..  144935 -  -9.3  -3.15544   TCTCAGCCTGACCAA         CTTCCCGGGCG GTCTT CGCCCGGGATT         TTTCTCTTCAACGCA  61 134
        mrcB  140648 ..  140686 - -11.7  -3.53761   GAAGCGCTTTGCAAA  GCGCTTGATCAAGGCGCT TCGA AGCGCCTTG-CCGCGCGC   CGCGGCTCAGTTCCG  74 32
   Dshi_0139  137194 ..  137204 -  -4.6  -2.78384   GGTCCGGTCATGACA                 CGCC TCC AGCG                 GCTTTCTTCAGGATT  44 7
        hlyD NONE
   Dshi_0137 NONE
        ugpQ  134602 ..  134625 -    -3  -3.85698   GTCGCCTTGCACAAA          TGGCCCCGGCG CGT CGC-GGGTCAA          GCCTCCGGCACGGGC  56 22
   Dshi_0135 NONE
         pcd  132524 ..  132569 -  -4.6  -2.71712   CGTGCCGGTCGAAAC CTTGCGCCCCGGGGATCTTGTG CAGA CGCGGGAT-CACGGGGCGC-AG CCCGTGCTCTGGGTC  43 514
       ilvD1 NONE
   Dshi_0128 NONE
   Dshi_0127 NONE
   Dshi_0126 NONE
        fadH NONE
   Dshi_0124  122189 ..  122233 -  -4.9  -4.06502   TATCGGGAAAGCAAA GGGGTTTTGTTCGCCGGTTCA AAG TAATCCGGCGAACAGAAGATC AACGGGTCAGGCTGC  63 32
   Dshi_0123  120890 ..  120902 -  -6.9  -4.09685   TGCCACGCTGGAAAA                CGGGC AAT ACCCG                TCCCTGACCGCGCTG  67 309
        sfsA NONE
         map  116564 ..  116578 -    -7  -3.53091   ACGGGTTTGCGCAAA               CCTGCG GAG CGCTGG               CGATCAAGCTTTGTA  57 29
   Dshi_0116  114427 ..  114437 -  -8.2  -3.28791   AGCCGTTTCCGAGAA                 GGCG GTG CGCC                 AAGTCCCGCGACCGC  60 266
        ahpC  111539 ..  111586 -  -6.7  -2.58861   GACTACCGGCAGAAC CGTCTCACCGGCGCGCAGCGC TATTTC GCGCTGAGGGGCGCGGAGGCG CGGGAAAAGCTGGAC  47 498
   Dshi_0111  109087 ..  109098 -  -5.8  -3.57263   AGGTCGAGGCGGAAA                GGGT TGCC ACCC                 GGCACGGGGTGAAGA  54 505
   Dshi_0108  106722 ..  106735 -  -3.7  -4.07568   GTGCGCCGTGGAAAA               GGGGG TTGG CCTCC                GGGGTGATGACCACA  61 258
   Dshi_0106  104972 ..  105010 -  -5.1  -3.37912   TATTCATAGAGAATA  TCGTG-CAGGCCGGGCCG GATG CGGCCGGGTCTGGCAAGG   CCGCCCCGCAGGAGC  53 261
   Dshi_0100 NONE
   Dshi_0099   96116 ..   96129 -  -2.3  -2.83191   TGCAGAAGAGATAAG               GGAAC TCTT GTGCC                TGCTCAGACATGCTT  40 57
   Dshi_0098 NONE
   Dshi_0097   95107 ..   95130 - -17.4  -4.18018   CGCTCCCATGCAAAA          GGGCCGCGCC CGGC GGCACGGCCC           CTCTGGTTCGGTTTT 100 49
   Dshi_0096 NONE
   Dshi_0095 NONE
   Dshi_0094 NONE
   Dshi_0093   91855 ..   91870 -  -3.2  -4.16842   TGTACCCGGAAGAAA              CCCCAA GACA TCGGGA               GTTCCCGGATGGGGA  61 51
       ipmi1 NONE
   Dshi_0084 NONE
        leuD   82408 ..   82435 - -14.2  -4.19238   GTCCGAACGTGAAAA        GGGCCTCCGATC CGTT GATCGAAAGCCC         CGCCATGTTTCGTCA 100 82
   Dshi_0082 NONE
        imdh   80032 ..   80057 - -17.7   -5.4505   GTTGCCAAGAAAAAA         GGACTGCATCC GGGT GGATGCAGTCC          GGGTCTGCGAAGGTT 100 48
   Dshi_0080   78774 ..   78788 -    -7  -3.28712   GGCCCTGCGCTACAA               GGCGCC GCT GGTGCC               GTGCTTTGGTATTCG  54 206
   Dshi_0075   74892 ..   74918 - -17.2  -3.33696   CCCGCCCCGAAGGAA         CGCCGCGCCAGG GGT CCCGGCGCGGCC         TCTCCTTGTCGTTAT  91 243
   Dshi_0073 NONE
        rsbW   72707 ..   72727 -  -3.2  -2.62184   GCGGCCGTCACATTA           GGCAGCCCG CGCG CGGG-TGCA            AGGCGAGAGGCTAAC  39 36
        ggt1   71042 ..   71064 -  -4.7  -3.26471   GCATTTCCAGATGAA           CTGATCCGG TGATC CCGGCTCCG           GGATGGAGCCGGGGT  50 54
   Dshi_0069 NONE
   Dshi_0068   68963 ..   68993 - -12.4  -3.15544   TGCCATGGCGATCAA       CCCGGCCGCGACCG GCC CGGCCCCAGCCCGG       CACCGGCGATGCAGC  69 122
   Dshi_0065 NONE
        pmbA NONE
       suhB2   63751 ..   63766 - -10.4  -3.65314   GCGAAGGGCCAACAA              GCGCCT TCGA AGGCGC               TTGGCGCTAGCTGGA  70 32
   Dshi_0061   60948 ..   60969 - -15.9  -4.72272   GCGGTCTACGAAAAA           CAGGCGCAC GGGG GTGCGCCTG            TTGCCCGATTGCCCG 100 48
   Dshi_0060 NONE
        ftsK NONE
        lolA NONE
        leuS NONE
   Dshi_0056 NONE
        holA NONE
        gst2   50858 ..   50880 -  -5.5  -3.14132   GCGCTGGTGCAGGAA          TGCGCGCGCC CCCT GTCGCGCG-A           TCCGGCGGATTTGGC  49 287
   Dshi_0052 NONE
   Dshi_0051 NONE
   Dshi_0050   48613 ..   48627 -  -4.2  -3.66654   GAGTTGAAGCGGAAA               GGCGTA ACC TATGCC               CAGCTCGCCGACATG  54 148
   Dshi_0048 NONE
   Dshi_0047   46481 ..   46491 -  -4.6  -3.01712   CCGTTCCGCGCAAGA                 CGCC CAA GGCA                 TTCAAGAAGGGAGAA  45 518
   Dshi_0045 NONE
   Dshi_0043   43858 ..   43878 -   -14  -5.09259   CATCCCAAAAGAAAA            GAGCGGGC ACAAG GCCCGCTC            TCCGCTTCAATCAAC 100 50
   Dshi_0042 NONE
   Dshi_0038   40296 ..   40316 -   -14  -5.40072   CCTTGTCGAAAAAAA            TGCCGGGC ACGAG GCCCGGCA            AGTCCAACAGGGAGG 100 141
        xthA NONE
       trxA2 NONE
   Dshi_0034 NONE
   Dshi_0033   36652 ..   36662 -  -5.4  -2.52464   GGGGCGTTCAAGGCA                 GCAT GGG ATGC                 AGGCCGGTGGGCCGG  43 79
        kdtA   35225 ..   35263 -  -5.1  -3.28712   GGGCGCGTGCCAGAA  GCCGGGCGGGCGCATCAG GGGG CTT-TGCGCGCGGCGGGC   TCGGCGCCGTCGAGC  50 1
        lpxK   34191 ..   34226 -  -7.4   -3.9461   CTGCTCGAAGAATAA    GCCCCGCGCCGGGGAAT GTG ACGCGCCG-CGCGGGGT    TACAAGCGGCGTGTT  68 25
        mutY NONE
       alkB1   30620 ..   30647 - -11.2   -2.5806   AAATTGTCTGACAAT        CCACGCGCGGACC ACA GG-CCGCGCCCGG        TCCAGTCAGCGTGGC  62 31
   Dshi_0021 NONE
   Dshi_0020   24891 ..   24908 - -11.3  -4.48175   AAAACGCAACGAAAA             CCTTCCC CGCG GGGAAGG              TTTTGGCGTCTTTCG  95 414
   Dshi_0018 NONE
   Dshi_0017   19150 ..   19177 - -10.6  -3.31461   GATCGAGCGCTACAA        CACCGCCGATGCC TAT GTCATCG-CGGTG        GGGGTTCTGAGCGAC  66 364
   Dshi_0010   12098 ..   12110 -  -6.2  -3.45366   TGCGCAATTAAGCAA                GCGC TATTC GCGC                GCCGCCCCGGTCACG  55 36
        csp2   11683 ..   11708 - -19.1   -4.2349   CCCCCACACGCAAAA         CGGGCGTATCG TTGC CGATACGCCCG          TTCGAAATTGTCAGC 100 64
   Dshi_0004    6956 ..    6980 -  -6.3  -2.80816   GCGCGACCCATCAGA          GCGGCCGACTT GGA AGGTCGTCCAC          CAAGAGCTTTACGAG  49 302
