Dfer_0064	PWY-7346	UDP-&alpha;-D-glucuronate biosynthesis (from UDP-glucose)
Dfer_0088	PWY-6703	preQ<sub>0</sub> biosynthesis
Dfer_0116	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Dfer_0116	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
Dfer_0116	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
Dfer_0151	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
Dfer_0151	PWY-622	starch biosynthesis
Dfer_0152	PWY-2622	trehalose biosynthesis IV
Dfer_0155	PWY-2661	trehalose biosynthesis V
Dfer_0155	PWY-5941	glycogen degradation II (eukaryotic)
Dfer_0155	PWY-6724	starch degradation II
Dfer_0155	PWY-6737	starch degradation V
Dfer_0155	PWY-7238	sucrose biosynthesis II
Dfer_0209	PWY-2941	L-lysine biosynthesis II
Dfer_0209	PWY-2942	L-lysine biosynthesis III
Dfer_0209	PWY-5097	L-lysine biosynthesis VI
Dfer_0213	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
Dfer_0213	PWY-622	starch biosynthesis
Dfer_0220	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Dfer_0223	PWY-6614	tetrahydrofolate biosynthesis
Dfer_0229	PWY-7165	L-ascorbate biosynthesis VI (engineered pathway)
Dfer_0239	PWY-5686	UMP biosynthesis
Dfer_0247	PWY-6807	xyloglucan degradation II (exoglucanase)
Dfer_0248	PWY-1281	sulfoacetaldehyde degradation I
Dfer_0248	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
Dfer_0248	PWY-5482	pyruvate fermentation to acetate II
Dfer_0248	PWY-5485	pyruvate fermentation to acetate IV
Dfer_0248	PWY-5497	purine nucleobases degradation II (anaerobic)
Dfer_0248	PWY-6637	sulfolactate degradation II
Dfer_0248	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
Dfer_0249	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
Dfer_0249	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
Dfer_0249	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
Dfer_0290	PWY-5386	methylglyoxal degradation I
Dfer_0397	PWY-2661	trehalose biosynthesis V
Dfer_0405	PWY-5381	pyridine nucleotide cycling (plants)
Dfer_0405	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
Dfer_0405	PWY-6596	adenosine nucleotides degradation I
Dfer_0405	PWY-6606	guanosine nucleotides degradation II
Dfer_0405	PWY-6607	guanosine nucleotides degradation I
Dfer_0405	PWY-6608	guanosine nucleotides degradation III
Dfer_0405	PWY-7185	UTP and CTP dephosphorylation I
Dfer_0406	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
Dfer_0406	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
Dfer_0406	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
Dfer_0407	PWY-101	photosynthesis light reactions
Dfer_0407	PWY-7230	ubiquinol-6 biosynthesis from 4-aminobenzoate (eukaryotic)
Dfer_0436	PWY-6840	homoglutathione biosynthesis
Dfer_0436	PWY-7255	ergothioneine biosynthesis I (bacteria)
Dfer_0440	PWY-282	cuticular wax biosynthesis
Dfer_0446	PWY-381	nitrate reduction II (assimilatory)
Dfer_0446	PWY-5675	nitrate reduction V (assimilatory)
Dfer_0446	PWY-6549	L-glutamine biosynthesis III
Dfer_0446	PWY-6963	ammonia assimilation cycle I
Dfer_0446	PWY-6964	ammonia assimilation cycle II
Dfer_0448	PWY-381	nitrate reduction II (assimilatory)
Dfer_0448	PWY-5675	nitrate reduction V (assimilatory)
Dfer_0448	PWY-6549	L-glutamine biosynthesis III
Dfer_0448	PWY-6963	ammonia assimilation cycle I
Dfer_0448	PWY-6964	ammonia assimilation cycle II
Dfer_0461	PWY-7560	methylerythritol phosphate pathway II
Dfer_0465	PWY-3821	galactose degradation III
Dfer_0465	PWY-6317	galactose degradation I (Leloir pathway)
Dfer_0465	PWY-6527	stachyose degradation
Dfer_0468	PWY-5663	tetrahydrobiopterin biosynthesis I
Dfer_0468	PWY-5664	tetrahydrobiopterin biosynthesis II
Dfer_0468	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
Dfer_0468	PWY-6703	preQ<sub>0</sub> biosynthesis
Dfer_0468	PWY-6983	tetrahydrobiopterin biosynthesis III
Dfer_0468	PWY-7442	drosopterin and aurodrosopterin biosynthesis
Dfer_0474	PWY-5381	pyridine nucleotide cycling (plants)
Dfer_0474	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
Dfer_0474	PWY-6596	adenosine nucleotides degradation I
Dfer_0474	PWY-6606	guanosine nucleotides degradation II
Dfer_0474	PWY-6607	guanosine nucleotides degradation I
Dfer_0474	PWY-6608	guanosine nucleotides degradation III
Dfer_0474	PWY-7185	UTP and CTP dephosphorylation I
Dfer_0486	PWY-1081	homogalacturonan degradation
Dfer_0486	PWY-7246	pectin degradation II
Dfer_0486	PWY-7248	pectin degradation III
Dfer_0514	PWY-7052	cyanophycin metabolism
Dfer_0515	PWY-7052	cyanophycin metabolism
Dfer_0552	PWY-2781	<i>cis</i>-zeatin biosynthesis
Dfer_0555	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
Dfer_0555	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
Dfer_0595	PWY-7242	D-fructuronate degradation
Dfer_0604	PWY-4381	fatty acid biosynthesis initiation I
Dfer_0630	PWY-5530	sorbitol biosynthesis II
Dfer_0651	PWY-7533	gliotoxin biosynthesis
Dfer_0700	PWY-3781	aerobic respiration I (cytochrome c)
Dfer_0700	PWY-4521	arsenite oxidation I (respiratory)
Dfer_0700	PWY-6692	Fe(II) oxidation
Dfer_0700	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Dfer_0751	PWY-6654	phosphopantothenate biosynthesis III
Dfer_0796	PWY-6784	cellulose and hemicellulose degradation (cellulolosome)
Dfer_0814	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
Dfer_0814	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Dfer_0814	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
Dfer_0814	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
Dfer_1015	PWY-7130	L-glucose degradation
Dfer_1016	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
Dfer_1016	PWY-6507	4-deoxy-L-<i>threo</i>-hex-4-enopyranuronate degradation
Dfer_1016	PWY-7242	D-fructuronate degradation
Dfer_1016	PWY-7310	D-glucosaminate degradation
Dfer_1025	PWY-7533	gliotoxin biosynthesis
Dfer_1026	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
Dfer_1046	PWY-1042	glycolysis IV (plant cytosol)
Dfer_1046	PWY-5484	glycolysis II (from fructose 6-phosphate)
Dfer_1046	PWY-6901	superpathway of glucose and xylose degradation
Dfer_1046	PWY-7003	glycerol degradation to butanol
Dfer_1048	PWY-2161	folate polyglutamylation
Dfer_1055	PWY-5791	1,4-dihydroxy-2-naphthoate biosynthesis II (plants)
Dfer_1055	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
Dfer_1066	PWY-6012	acyl carrier protein metabolism I
Dfer_1094	PWY-5344	L-homocysteine biosynthesis
Dfer_1094	PWY-7174	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation II
Dfer_1148	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Dfer_1151	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
Dfer_1151	PWY-7177	UTP and CTP dephosphorylation II
Dfer_1151	PWY-7185	UTP and CTP dephosphorylation I
Dfer_1153	PWY-6562	norspermidine biosynthesis
Dfer_1188	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
Dfer_1188	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
Dfer_1209	PWY-5747	2-methylcitrate cycle II
Dfer_1212	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
Dfer_1212	PWY-2201	folate transformations I
Dfer_1212	PWY-3841	folate transformations II
Dfer_1212	PWY-5030	L-histidine degradation III
Dfer_1212	PWY-5497	purine nucleobases degradation II (anaerobic)
Dfer_1212	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
Dfer_1216	PWY-5791	1,4-dihydroxy-2-naphthoate biosynthesis II (plants)
Dfer_1216	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
Dfer_1231	PWY-3801	sucrose degradation II (sucrose synthase)
Dfer_1231	PWY-5054	sorbitol biosynthesis I
Dfer_1231	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
Dfer_1231	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
Dfer_1231	PWY-5659	GDP-mannose biosynthesis
Dfer_1231	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Dfer_1231	PWY-621	sucrose degradation III (sucrose invertase)
Dfer_1231	PWY-622	starch biosynthesis
Dfer_1231	PWY-6531	mannitol cycle
Dfer_1231	PWY-6981	chitin biosynthesis
Dfer_1231	PWY-7238	sucrose biosynthesis II
Dfer_1231	PWY-7347	sucrose biosynthesis III
Dfer_1231	PWY-7385	1,3-propanediol biosynthesis (engineered)
Dfer_1247	PWY-5523	5,6-dimethylbenzimidazole biosynthesis
Dfer_1247	PWY-6167	flavin biosynthesis II (archaea)
Dfer_1247	PWY-6168	flavin biosynthesis III (fungi)
Dfer_1263	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Dfer_1304	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Dfer_1304	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Dfer_1383	PWY-5491	diethylphosphate degradation
Dfer_1408	PWY-7242	D-fructuronate degradation
Dfer_1418	PWY-723	alkylnitronates degradation
Dfer_1490	PWY-2661	trehalose biosynthesis V
Dfer_1570	PWY-6788	cellulose degradation II (fungi)
Dfer_1575	PWY-2201	folate transformations I
Dfer_1575	PWY-3841	folate transformations II
Dfer_1598	PWY-5530	sorbitol biosynthesis II
Dfer_1603	PWY-621	sucrose degradation III (sucrose invertase)
Dfer_1621	PWY-7052	cyanophycin metabolism
Dfer_1685	PWY-6986	alginate degradation
Dfer_1725	PWY-6902	chitin degradation II
Dfer_1788	PWY-3781	aerobic respiration I (cytochrome c)
Dfer_1788	PWY-4521	arsenite oxidation I (respiratory)
Dfer_1788	PWY-6692	Fe(II) oxidation
Dfer_1788	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Dfer_1789	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
Dfer_1801	PWY-5506	methanol oxidation to formaldehyde IV
Dfer_1887	PWY-6483	ceramide degradation
Dfer_1887	PWY-7119	sphingolipid recycling and degradation (yeast)
Dfer_1888	PWY-7533	gliotoxin biosynthesis
Dfer_1889	PWY-1361	benzoyl-CoA degradation I (aerobic)
Dfer_1889	PWY-5109	2-methylbutanoate biosynthesis
Dfer_1889	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
Dfer_1889	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
Dfer_1889	PWY-5177	glutaryl-CoA degradation
Dfer_1889	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Dfer_1889	PWY-6435	4-hydroxybenzoate biosynthesis V
Dfer_1889	PWY-6583	pyruvate fermentation to butanol I
Dfer_1889	PWY-6863	pyruvate fermentation to hexanol
Dfer_1889	PWY-6883	pyruvate fermentation to butanol II
Dfer_1889	PWY-6944	androstenedione degradation
Dfer_1889	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
Dfer_1889	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
Dfer_1889	PWY-7007	methyl ketone biosynthesis
Dfer_1889	PWY-7046	4-coumarate degradation (anaerobic)
Dfer_1889	PWY-7094	fatty acid salvage
Dfer_1889	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
Dfer_1889	PWY-735	jasmonic acid biosynthesis
Dfer_1889	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
Dfer_1891	PWY-1361	benzoyl-CoA degradation I (aerobic)
Dfer_1891	PWY-5109	2-methylbutanoate biosynthesis
Dfer_1891	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
Dfer_1891	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
Dfer_1891	PWY-5177	glutaryl-CoA degradation
Dfer_1891	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Dfer_1891	PWY-6435	4-hydroxybenzoate biosynthesis V
Dfer_1891	PWY-6583	pyruvate fermentation to butanol I
Dfer_1891	PWY-6863	pyruvate fermentation to hexanol
Dfer_1891	PWY-6883	pyruvate fermentation to butanol II
Dfer_1891	PWY-6944	androstenedione degradation
Dfer_1891	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
Dfer_1891	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
Dfer_1891	PWY-7007	methyl ketone biosynthesis
Dfer_1891	PWY-7046	4-coumarate degradation (anaerobic)
Dfer_1891	PWY-7094	fatty acid salvage
Dfer_1891	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
Dfer_1891	PWY-735	jasmonic acid biosynthesis
Dfer_1891	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
Dfer_1914	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
Dfer_1914	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
Dfer_1955	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
Dfer_1955	PWY-622	starch biosynthesis
Dfer_1956	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
Dfer_1971	PWY-5651	L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
Dfer_1971	PWY-6309	L-tryptophan degradation XI (mammalian, via kynurenine)
Dfer_1975	PWY-7456	mannan degradation
Dfer_1976	PWY-6788	cellulose degradation II (fungi)
Dfer_1985	PWY-5971	palmitate biosynthesis II (bacteria and plants)
Dfer_1985	PWY-5973	<i>cis</i>-vaccenate biosynthesis
Dfer_1985	PWY-5989	stearate biosynthesis II (bacteria and plants)
Dfer_1985	PWY-5994	palmitate biosynthesis I (animals and fungi)
Dfer_1985	PWY-6113	superpathway of mycolate biosynthesis
Dfer_1985	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
Dfer_1985	PWY-6519	8-amino-7-oxononanoate biosynthesis I
Dfer_1985	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Dfer_1985	PWYG-321	mycolate biosynthesis
Dfer_2005	PWY-4261	glycerol degradation I
Dfer_2005	PWY-6118	glycerol-3-phosphate shuttle
Dfer_2005	PWY-6952	glycerophosphodiester degradation
Dfer_2011	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
Dfer_2032	PWY-5123	<i>trans, trans</i>-farnesyl diphosphate biosynthesis
Dfer_2032	PWY-6174	mevalonate pathway II (archaea)
Dfer_2032	PWY-6383	mono-<i>trans</i>, poly-<i>cis</i> decaprenyl phosphate biosynthesis
Dfer_2032	PWY-6859	<i>all-trans</i>-farnesol biosynthesis
Dfer_2032	PWY-7102	bisabolene biosynthesis
Dfer_2032	PWY-7391	isoprene biosynthesis II (engineered)
Dfer_2032	PWY-7524	mevalonate pathway III (archaea)
Dfer_2032	PWY-7560	methylerythritol phosphate pathway II
Dfer_2032	PWY-922	mevalonate pathway I
Dfer_2034	PWY-5943	&beta;-carotene biosynthesis
Dfer_2034	PWY-5947	lutein biosynthesis
Dfer_2039	PWY-6823	molybdenum cofactor biosynthesis
Dfer_2039	PWY-6891	thiazole biosynthesis II (Bacillus)
Dfer_2039	PWY-6892	thiazole biosynthesis I (E. coli)
Dfer_2039	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
Dfer_2043	PWY-7456	mannan degradation
Dfer_2049	PWY-6823	molybdenum cofactor biosynthesis
Dfer_2049	PWY-6891	thiazole biosynthesis II (Bacillus)
Dfer_2049	PWY-6892	thiazole biosynthesis I (E. coli)
Dfer_2049	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
Dfer_2058	PWY-6683	sulfate reduction III (assimilatory)
Dfer_2059	PWY-5194	siroheme biosynthesis
Dfer_2059	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
Dfer_2105	PWY-6788	cellulose degradation II (fungi)
Dfer_2108	PWY-6134	L-tyrosine biosynthesis IV
Dfer_2108	PWY-7158	L-phenylalanine degradation V
Dfer_2113	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
Dfer_2113	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
Dfer_2113	PWY-6936	seleno-amino acid biosynthesis
Dfer_2113	PWY-702	L-methionine biosynthesis II
Dfer_2127	PWY-6891	thiazole biosynthesis II (Bacillus)
Dfer_2127	PWY-6892	thiazole biosynthesis I (E. coli)
Dfer_2127	PWY-7560	methylerythritol phosphate pathway II
Dfer_2138	PWY-5532	adenosine nucleotides degradation IV
Dfer_2138	PWY-5723	Rubisco shunt
Dfer_2141	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Dfer_2141	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Dfer_2143	PWY-4261	glycerol degradation I
Dfer_2177	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Dfer_2177	PWY-5723	Rubisco shunt
Dfer_2275	PWY-5491	diethylphosphate degradation
Dfer_2369	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
Dfer_2369	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
Dfer_2398	PWY-4261	glycerol degradation I
Dfer_2425	PWY-842	starch degradation I
Dfer_2434	PWY-6784	cellulose and hemicellulose degradation (cellulolosome)
Dfer_2459	PWY-6890	4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis
Dfer_2460	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
Dfer_2460	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
Dfer_2460	PWY-6897	thiamin salvage II
Dfer_2460	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
Dfer_2460	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
Dfer_2460	PWY-7353	4-methyl-5(&beta;-hydroxyethyl)thiazole salvage (yeast)
Dfer_2460	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
Dfer_2461	PWY-6891	thiazole biosynthesis II (Bacillus)
Dfer_2461	PWY-6892	thiazole biosynthesis I (E. coli)
Dfer_2462	PWY-6892	thiazole biosynthesis I (E. coli)
Dfer_2462	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
Dfer_2476	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Dfer_2476	PWY-5686	UMP biosynthesis
Dfer_2476	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Dfer_2482	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Dfer_2482	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
Dfer_2489	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Dfer_2493	PWY-7165	L-ascorbate biosynthesis VI (engineered pathway)
Dfer_2503	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Dfer_2544	PWY-6825	phosphatidylcholine biosynthesis V
Dfer_2580	PWY-6829	tRNA methylation (yeast)
Dfer_2580	PWY-7285	methylwyosine biosynthesis
Dfer_2580	PWY-7286	7-(3-amino-3-carboxypropyl)-wyosine biosynthesis
Dfer_2588	PWY-5367	petroselinate biosynthesis
Dfer_2588	PWY-5971	palmitate biosynthesis II (bacteria and plants)
Dfer_2588	PWY-5973	<i>cis</i>-vaccenate biosynthesis
Dfer_2588	PWY-5989	stearate biosynthesis II (bacteria and plants)
Dfer_2588	PWY-5994	palmitate biosynthesis I (animals and fungi)
Dfer_2588	PWY-6113	superpathway of mycolate biosynthesis
Dfer_2588	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
Dfer_2588	PWY-6519	8-amino-7-oxononanoate biosynthesis I
Dfer_2588	PWY-6951	Dfer_2588
Dfer_2588	PWY-7053	docosahexaenoate biosynthesis I (lower eukaryotes)
Dfer_2588	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Dfer_2588	PWYG-321	mycolate biosynthesis
Dfer_2609	PWY-6807	xyloglucan degradation II (exoglucanase)
Dfer_2616	PWY-5278	sulfite oxidation III
Dfer_2616	PWY-5340	sulfate activation for sulfonation
Dfer_2616	PWY-6683	sulfate reduction III (assimilatory)
Dfer_2616	PWY-6932	selenate reduction
Dfer_2617	PWY-5278	sulfite oxidation III
Dfer_2617	PWY-5340	sulfate activation for sulfonation
Dfer_2617	PWY-6683	sulfate reduction III (assimilatory)
Dfer_2617	PWY-6932	selenate reduction
Dfer_2618	PWY-6683	sulfate reduction III (assimilatory)
Dfer_2619	PWY-5194	siroheme biosynthesis
Dfer_2619	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
Dfer_2630	PWY-43	putrescine biosynthesis II
Dfer_2651	PWY-2201	folate transformations I
Dfer_2651	PWY-3841	folate transformations II
Dfer_2657	PWY-5686	UMP biosynthesis
Dfer_2664	PWY-5964	guanylyl molybdenum cofactor biosynthesis
Dfer_2669	PWY-5344	L-homocysteine biosynthesis
Dfer_2681	PWY-5839	menaquinol-7 biosynthesis
Dfer_2681	PWY-5851	demethylmenaquinol-9 biosynthesis
Dfer_2681	PWY-5852	demethylmenaquinol-8 biosynthesis I
Dfer_2681	PWY-5853	demethylmenaquinol-6 biosynthesis I
Dfer_2681	PWY-5890	menaquinol-10 biosynthesis
Dfer_2681	PWY-5891	menaquinol-11 biosynthesis
Dfer_2681	PWY-5892	menaquinol-12 biosynthesis
Dfer_2681	PWY-5895	menaquinol-13 biosynthesis
Dfer_2688	PWY-1042	glycolysis IV (plant cytosol)
Dfer_2688	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Dfer_2688	PWY-5484	glycolysis II (from fructose 6-phosphate)
Dfer_2688	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Dfer_2688	PWY-7385	1,3-propanediol biosynthesis (engineered)
Dfer_2697	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
Dfer_2700	PWY-1042	glycolysis IV (plant cytosol)
Dfer_2700	PWY-5484	glycolysis II (from fructose 6-phosphate)
Dfer_2700	PWY-6886	1-butanol autotrophic biosynthesis
Dfer_2700	PWY-6901	superpathway of glucose and xylose degradation
Dfer_2700	PWY-7003	glycerol degradation to butanol
Dfer_2736	PWY-5392	reductive TCA cycle II
Dfer_2736	PWY-5537	pyruvate fermentation to acetate V
Dfer_2736	PWY-5538	pyruvate fermentation to acetate VI
Dfer_2736	PWY-5690	TCA cycle II (plants and fungi)
Dfer_2736	PWY-5913	TCA cycle VI (obligate autotrophs)
Dfer_2736	PWY-6728	methylaspartate cycle
Dfer_2736	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Dfer_2736	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Dfer_2757	PWY-2721	trehalose degradation III
Dfer_2757	PWY-2722	trehalose degradation IV
Dfer_2757	PWY-6317	galactose degradation I (Leloir pathway)
Dfer_2757	PWY-7459	kojibiose degradation
Dfer_2767	PWY-3461	L-tyrosine biosynthesis II
Dfer_2767	PWY-3462	L-phenylalanine biosynthesis II
Dfer_2767	PWY-6120	L-tyrosine biosynthesis III
Dfer_2767	PWY-6627	salinosporamide A biosynthesis
Dfer_2767	PWY-7432	L-phenylalanine biosynthesis III (cytosolic, plants)
Dfer_2786	PWY-6906	chitin derivatives degradation
Dfer_2786	PWY-7077	<i>N</i>-acetyl-D-galactosamine degradation
Dfer_2786	PWY-7395	D-galactosamine and <i>N</i>-acetyl-D-galactosamine degradation
Dfer_2796	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Dfer_2796	PWY-6416	quinate degradation II
Dfer_2796	PWY-6707	gallate biosynthesis
Dfer_2804	PWY-2201	folate transformations I
Dfer_2804	PWY-3841	folate transformations II
Dfer_2814	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
Dfer_2814	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
Dfer_2814	PWY-6936	seleno-amino acid biosynthesis
Dfer_2814	PWY-702	L-methionine biosynthesis II
Dfer_2815	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
Dfer_2815	PWY-6855	chitin degradation I (archaea)
Dfer_2815	PWY-6906	chitin derivatives degradation
Dfer_2816	PWY-5392	reductive TCA cycle II
Dfer_2816	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
Dfer_2816	PWY-5690	TCA cycle II (plants and fungi)
Dfer_2816	PWY-5913	TCA cycle VI (obligate autotrophs)
Dfer_2816	PWY-6728	methylaspartate cycle
Dfer_2816	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Dfer_2816	PWY-7254	TCA cycle VII (acetate-producers)
Dfer_2816	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Dfer_2819	PWY-3821	galactose degradation III
Dfer_2819	PWY-6317	galactose degradation I (Leloir pathway)
Dfer_2819	PWY-6527	stachyose degradation
Dfer_2820	PWY-2723	trehalose degradation V
Dfer_2820	PWY-6317	galactose degradation I (Leloir pathway)
Dfer_2820	PWY-6737	starch degradation V
Dfer_2827	PWY-6454	vancomycin resistance I
Dfer_2827	PWY-6455	vancomycin resistance II
Dfer_2832	PWY-5381	pyridine nucleotide cycling (plants)
Dfer_2832	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
Dfer_2839	PWY-6507	4-deoxy-L-<i>threo</i>-hex-4-enopyranuronate degradation
Dfer_2847	PWY-5988	wound-induced proteolysis I
Dfer_2847	PWY-6018	seed germination protein turnover
Dfer_2864	PWY-5667	CDP-diacylglycerol biosynthesis I
Dfer_2864	PWY-5981	CDP-diacylglycerol biosynthesis III
Dfer_2884	PWY-6164	3-dehydroquinate biosynthesis I
Dfer_2889	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
Dfer_2889	PWY-6148	tetrahydromethanopterin biosynthesis
Dfer_2889	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
Dfer_2889	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
Dfer_2892	PWY-6012	acyl carrier protein metabolism I
Dfer_2892	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
Dfer_2894	PWY-3821	galactose degradation III
Dfer_2894	PWY-6317	galactose degradation I (Leloir pathway)
Dfer_2894	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
Dfer_2894	PWY-6527	stachyose degradation
Dfer_2894	PWY-7328	superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
Dfer_2894	PWY-7344	UDP-D-galactose biosynthesis
Dfer_2895	PWY-3221	dTDP-L-rhamnose biosynthesis II
Dfer_2895	PWY-6808	dTDP-D-forosamine biosynthesis
Dfer_2895	PWY-6942	dTDP-D-desosamine biosynthesis
Dfer_2895	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
Dfer_2895	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
Dfer_2895	PWY-6974	dTDP-L-olivose biosynthesis
Dfer_2895	PWY-6976	dTDP-L-mycarose biosynthesis
Dfer_2895	PWY-7104	dTDP-L-megosamine biosynthesis
Dfer_2895	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
Dfer_2895	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
Dfer_2895	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
Dfer_2895	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
Dfer_2895	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
Dfer_2895	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
Dfer_2895	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
Dfer_2895	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
Dfer_2896	PWY-3221	dTDP-L-rhamnose biosynthesis II
Dfer_2896	PWY-6808	dTDP-D-forosamine biosynthesis
Dfer_2896	PWY-6942	dTDP-D-desosamine biosynthesis
Dfer_2896	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
Dfer_2896	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
Dfer_2896	PWY-6974	dTDP-L-olivose biosynthesis
Dfer_2896	PWY-6976	dTDP-L-mycarose biosynthesis
Dfer_2896	PWY-7104	dTDP-L-megosamine biosynthesis
Dfer_2896	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
Dfer_2896	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
Dfer_2896	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
Dfer_2896	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
Dfer_2896	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
Dfer_2896	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
Dfer_2896	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
Dfer_2896	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
Dfer_2906	PWY-6854	ethylene biosynthesis III (microbes)
Dfer_2911	PWY-5392	reductive TCA cycle II
Dfer_2911	PWY-5537	pyruvate fermentation to acetate V
Dfer_2911	PWY-5538	pyruvate fermentation to acetate VI
Dfer_2911	PWY-5690	TCA cycle II (plants and fungi)
Dfer_2911	PWY-5913	TCA cycle VI (obligate autotrophs)
Dfer_2911	PWY-6728	methylaspartate cycle
Dfer_2911	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Dfer_2911	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Dfer_2913	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Dfer_2913	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
Dfer_2922	PWY-2781	<i>cis</i>-zeatin biosynthesis
Dfer_2926	PWY-6167	flavin biosynthesis II (archaea)
Dfer_2926	PWY-6168	flavin biosynthesis III (fungi)
Dfer_2926	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Dfer_2930	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
Dfer_2930	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Dfer_2930	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
Dfer_2930	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
Dfer_2936	PWY-6891	thiazole biosynthesis II (Bacillus)
Dfer_2936	PWY-6892	thiazole biosynthesis I (E. coli)
Dfer_2936	PWY-7560	methylerythritol phosphate pathway II
Dfer_2948	PWY-7560	methylerythritol phosphate pathway II
Dfer_2966	PWY-5686	UMP biosynthesis
Dfer_2967	PWY-2941	L-lysine biosynthesis II
Dfer_2967	PWY-2942	L-lysine biosynthesis III
Dfer_2967	PWY-5097	L-lysine biosynthesis VI
Dfer_2974	PWY-4381	fatty acid biosynthesis initiation I
Dfer_2974	PWY-5743	3-hydroxypropanoate cycle
Dfer_2974	PWY-5744	glyoxylate assimilation
Dfer_2974	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Dfer_2974	PWY-6679	jadomycin biosynthesis
Dfer_2974	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Dfer_3001	PWY-7346	UDP-&alpha;-D-glucuronate biosynthesis (from UDP-glucose)
Dfer_3003	PWY-6788	cellulose degradation II (fungi)
Dfer_3006	PWY-5491	diethylphosphate degradation
Dfer_3007	PWY-5491	diethylphosphate degradation
Dfer_3015	PWY-5971	palmitate biosynthesis II (bacteria and plants)
Dfer_3015	PWY-5973	<i>cis</i>-vaccenate biosynthesis
Dfer_3015	PWY-5989	stearate biosynthesis II (bacteria and plants)
Dfer_3015	PWY-5994	palmitate biosynthesis I (animals and fungi)
Dfer_3015	PWY-6113	superpathway of mycolate biosynthesis
Dfer_3015	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
Dfer_3015	PWY-6519	8-amino-7-oxononanoate biosynthesis I
Dfer_3015	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Dfer_3015	PWYG-321	mycolate biosynthesis
Dfer_3041	PWY-6807	xyloglucan degradation II (exoglucanase)
Dfer_3042	PWY-6807	xyloglucan degradation II (exoglucanase)
Dfer_3065	PWY-6823	molybdenum cofactor biosynthesis
Dfer_3067	PWY-6823	molybdenum cofactor biosynthesis
Dfer_3069	PWY-6823	molybdenum cofactor biosynthesis
Dfer_3074	PWY-6123	inosine-5'-phosphate biosynthesis I
Dfer_3074	PWY-6124	inosine-5'-phosphate biosynthesis II
Dfer_3074	PWY-7234	inosine-5'-phosphate biosynthesis III
Dfer_3077	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Dfer_3077	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Dfer_3086	PWY-6902	chitin degradation II
Dfer_3102	PWY-1042	glycolysis IV (plant cytosol)
Dfer_3102	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Dfer_3102	PWY-5484	glycolysis II (from fructose 6-phosphate)
Dfer_3102	PWY-7385	1,3-propanediol biosynthesis (engineered)
Dfer_3127	PWY-2301	<i>myo</i>-inositol biosynthesis
Dfer_3127	PWY-4661	1D-<i>myo</i>-inositol hexakisphosphate biosynthesis III (<i>Spirodela polyrrhiza</i>)
Dfer_3127	PWY-6372	1D-<i>myo</i>-inositol hexakisphosphate biosynthesis IV (<i>Dictyostelium</i>)
Dfer_3127	PWY-6580	phosphatidylinositol biosynthesis I (bacteria)
Dfer_3127	PWY-6664	di-myo-inositol phosphate biosynthesis
Dfer_3131	PWY-4261	glycerol degradation I
Dfer_3132	PWY-4261	glycerol degradation I
Dfer_3151	PWY-702	L-methionine biosynthesis II
Dfer_3152	PWY-2941	L-lysine biosynthesis II
Dfer_3152	PWY-2942	L-lysine biosynthesis III
Dfer_3152	PWY-5097	L-lysine biosynthesis VI
Dfer_3152	PWY-6559	spermidine biosynthesis II
Dfer_3152	PWY-6562	norspermidine biosynthesis
Dfer_3152	PWY-7153	grixazone biosynthesis
Dfer_3155	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Dfer_3155	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Dfer_3164	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Dfer_3164	PWY-6416	quinate degradation II
Dfer_3164	PWY-6707	gallate biosynthesis
Dfer_3184	PWY-5874	heme degradation
Dfer_3184	PWY-5915	phycoerythrobilin biosynthesis I
Dfer_3184	PWY-5917	phycocyanobilin biosynthesis
Dfer_3184	PWY-7170	phytochromobilin biosynthesis
Dfer_3190	PWY-5686	UMP biosynthesis
Dfer_3192	PWY-6902	chitin degradation II
Dfer_3197	PWY-5743	3-hydroxypropanoate cycle
Dfer_3197	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Dfer_3197	PWY-6728	methylaspartate cycle
Dfer_3197	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Dfer_3202	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
Dfer_3202	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
Dfer_3202	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
Dfer_3203	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
Dfer_3203	PWY-5912	2'-deoxymugineic acid phytosiderophore biosynthesis
Dfer_3228	PWY-5941	glycogen degradation II (eukaryotic)
Dfer_3228	PWY-622	starch biosynthesis
Dfer_3228	PWY-6731	starch degradation III
Dfer_3228	PWY-6737	starch degradation V
Dfer_3228	PWY-7238	sucrose biosynthesis II
Dfer_3251	PWY-6857	retinol biosynthesis
Dfer_3252	PWY-6936	seleno-amino acid biosynthesis
Dfer_3260	PWY-6700	queuosine biosynthesis
Dfer_3261	PWY-7560	methylerythritol phosphate pathway II
Dfer_3264	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
Dfer_3264	PWY-6855	chitin degradation I (archaea)
Dfer_3264	PWY-6906	chitin derivatives degradation
Dfer_3267	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
Dfer_3267	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Dfer_3267	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
Dfer_3267	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
Dfer_3267	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Dfer_3267	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Dfer_3267	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
Dfer_3267	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
Dfer_3276	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Dfer_3276	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
Dfer_3292	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
Dfer_3292	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Dfer_3292	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
Dfer_3292	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
Dfer_3292	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Dfer_3292	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Dfer_3292	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
Dfer_3292	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
Dfer_3300	PWY-6700	queuosine biosynthesis
Dfer_3302	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
Dfer_3302	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
Dfer_3302	PWY-6268	adenosylcobalamin salvage from cobalamin
Dfer_3302	PWY-6269	adenosylcobalamin salvage from cobinamide II
Dfer_3303	PWY-5057	L-valine degradation II
Dfer_3303	PWY-5076	L-leucine degradation III
Dfer_3303	PWY-5078	L-isoleucine degradation II
Dfer_3303	PWY-5101	L-isoleucine biosynthesis II
Dfer_3303	PWY-5103	L-isoleucine biosynthesis III
Dfer_3303	PWY-5104	L-isoleucine biosynthesis IV
Dfer_3303	PWY-5108	L-isoleucine biosynthesis V
Dfer_3304	PWY-5659	GDP-mannose biosynthesis
Dfer_3304	PWY-6073	alginate biosynthesis I (algal)
Dfer_3304	PWY-6082	alginate biosynthesis II (bacterial)
Dfer_3304	PWY-882	L-ascorbate biosynthesis I (L-galactose pathway)
Dfer_3313	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Dfer_3313	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Dfer_3359	PWY-6700	queuosine biosynthesis
Dfer_3361	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
Dfer_3361	PWY-7328	superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
Dfer_3365	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
Dfer_3365	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
Dfer_3375	PWY-5958	acridone alkaloid biosynthesis
Dfer_3375	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
Dfer_3375	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
Dfer_3378	PWY-1042	glycolysis IV (plant cytosol)
Dfer_3378	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
Dfer_3378	PWY-5484	glycolysis II (from fructose 6-phosphate)
Dfer_3378	PWY-5723	Rubisco shunt
Dfer_3378	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Dfer_3378	PWY-6886	1-butanol autotrophic biosynthesis
Dfer_3378	PWY-6901	superpathway of glucose and xylose degradation
Dfer_3378	PWY-7003	glycerol degradation to butanol
Dfer_3378	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
Dfer_3378	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
Dfer_3421	PWY-3341	L-proline biosynthesis III
Dfer_3421	PWY-4981	L-proline biosynthesis II (from arginine)
Dfer_3421	PWY-6344	L-ornithine degradation II (Stickland reaction)
Dfer_3421	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
Dfer_3425	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
Dfer_3425	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
Dfer_3460	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Dfer_3460	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Dfer_3470	PWY-3781	aerobic respiration I (cytochrome c)
Dfer_3470	PWY-4521	arsenite oxidation I (respiratory)
Dfer_3470	PWY-6692	Fe(II) oxidation
Dfer_3470	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Dfer_3482	PWY-4381	fatty acid biosynthesis initiation I
Dfer_3482	PWY-5743	3-hydroxypropanoate cycle
Dfer_3482	PWY-5744	glyoxylate assimilation
Dfer_3482	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Dfer_3482	PWY-6679	jadomycin biosynthesis
Dfer_3482	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Dfer_3487	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Dfer_3487	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Dfer_3488	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
Dfer_3488	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
Dfer_3488	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
Dfer_3488	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
Dfer_3490	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Dfer_3490	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Dfer_3503	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
Dfer_3503	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
Dfer_3513	PWY-3341	L-proline biosynthesis III
Dfer_3513	PWY-4981	L-proline biosynthesis II (from arginine)
Dfer_3513	PWY-6344	L-ornithine degradation II (Stickland reaction)
Dfer_3519	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
Dfer_3519	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
Dfer_3519	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
Dfer_3526	PWY-1361	benzoyl-CoA degradation I (aerobic)
Dfer_3526	PWY-5109	2-methylbutanoate biosynthesis
Dfer_3526	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
Dfer_3526	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
Dfer_3526	PWY-5177	glutaryl-CoA degradation
Dfer_3526	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Dfer_3526	PWY-6435	4-hydroxybenzoate biosynthesis V
Dfer_3526	PWY-6583	pyruvate fermentation to butanol I
Dfer_3526	PWY-6863	pyruvate fermentation to hexanol
Dfer_3526	PWY-6883	pyruvate fermentation to butanol II
Dfer_3526	PWY-6944	androstenedione degradation
Dfer_3526	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
Dfer_3526	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
Dfer_3526	PWY-7007	methyl ketone biosynthesis
Dfer_3526	PWY-7046	4-coumarate degradation (anaerobic)
Dfer_3526	PWY-7094	fatty acid salvage
Dfer_3526	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
Dfer_3526	PWY-735	jasmonic acid biosynthesis
Dfer_3526	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
Dfer_3539	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
Dfer_3539	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Dfer_3539	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
Dfer_3539	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
Dfer_3539	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Dfer_3539	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Dfer_3539	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
Dfer_3539	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
Dfer_3540	PWY-6123	inosine-5'-phosphate biosynthesis I
Dfer_3540	PWY-6124	inosine-5'-phosphate biosynthesis II
Dfer_3540	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Dfer_3540	PWY-7234	inosine-5'-phosphate biosynthesis III
Dfer_3543	PWY-7560	methylerythritol phosphate pathway II
Dfer_3550	PWY-6807	xyloglucan degradation II (exoglucanase)
Dfer_3556	PWY-5669	phosphatidylethanolamine biosynthesis I
Dfer_3561	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
Dfer_3561	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
Dfer_3561	PWY-6896	thiamin salvage I
Dfer_3561	PWY-6897	thiamin salvage II
Dfer_3568	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
Dfer_3568	PWY-6148	tetrahydromethanopterin biosynthesis
Dfer_3568	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
Dfer_3568	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
Dfer_3571	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Dfer_3601	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Dfer_3601	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
Dfer_3601	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
Dfer_3637	PWY-4381	fatty acid biosynthesis initiation I
Dfer_3637	PWY-5743	3-hydroxypropanoate cycle
Dfer_3637	PWY-5744	glyoxylate assimilation
Dfer_3637	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Dfer_3637	PWY-6679	jadomycin biosynthesis
Dfer_3637	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Dfer_3640	PWY-6164	3-dehydroquinate biosynthesis I
Dfer_3649	PWY-5971	palmitate biosynthesis II (bacteria and plants)
Dfer_3649	PWY-5973	<i>cis</i>-vaccenate biosynthesis
Dfer_3649	PWY-5989	stearate biosynthesis II (bacteria and plants)
Dfer_3649	PWY-6113	superpathway of mycolate biosynthesis
Dfer_3649	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
Dfer_3649	PWY-6519	8-amino-7-oxononanoate biosynthesis I
Dfer_3649	PWY-7096	triclosan resistance
Dfer_3649	PWYG-321	mycolate biosynthesis
Dfer_3652	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Dfer_3652	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
Dfer_3667	PWY-6185	4-methylcatechol degradation (<i>ortho</i> cleavage)
Dfer_3669	PWY-2201	folate transformations I
Dfer_3669	PWY-5497	purine nucleobases degradation II (anaerobic)
Dfer_3670	PWY-6871	3-methylbutanol biosynthesis
Dfer_3671	PWY-7396	butanol and isobutanol biosynthesis (engineered)
Dfer_3672	PWY-6871	3-methylbutanol biosynthesis
Dfer_3679	PWY-5101	L-isoleucine biosynthesis II
Dfer_3679	PWY-5103	L-isoleucine biosynthesis III
Dfer_3679	PWY-5104	L-isoleucine biosynthesis IV
Dfer_3679	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Dfer_3680	PWY-5101	L-isoleucine biosynthesis II
Dfer_3680	PWY-5103	L-isoleucine biosynthesis III
Dfer_3680	PWY-5104	L-isoleucine biosynthesis IV
Dfer_3680	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
Dfer_3680	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
Dfer_3680	PWY-6389	(<i>S</i>)-acetoin biosynthesis
Dfer_3680	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Dfer_3681	PWY-5101	L-isoleucine biosynthesis II
Dfer_3681	PWY-5103	L-isoleucine biosynthesis III
Dfer_3681	PWY-5104	L-isoleucine biosynthesis IV
Dfer_3681	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
Dfer_3681	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
Dfer_3681	PWY-6389	(<i>S</i>)-acetoin biosynthesis
Dfer_3681	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Dfer_3684	PWY-5101	L-isoleucine biosynthesis II
Dfer_3684	PWY-5103	L-isoleucine biosynthesis III
Dfer_3684	PWY-5104	L-isoleucine biosynthesis IV
Dfer_3684	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Dfer_3692	PWY-5686	UMP biosynthesis
Dfer_3712	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
Dfer_3712	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
Dfer_3730	PWY-5913	TCA cycle VI (obligate autotrophs)
Dfer_3730	PWY-6549	L-glutamine biosynthesis III
Dfer_3730	PWY-6728	methylaspartate cycle
Dfer_3730	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Dfer_3730	PWY-7124	ethylene biosynthesis V (engineered)
Dfer_3730	PWY-7254	TCA cycle VII (acetate-producers)
Dfer_3730	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
Dfer_3732	PWY-2941	L-lysine biosynthesis II
Dfer_3732	PWY-2942	L-lysine biosynthesis III
Dfer_3732	PWY-5097	L-lysine biosynthesis VI
Dfer_3732	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Dfer_3732	PWY-6559	spermidine biosynthesis II
Dfer_3732	PWY-6562	norspermidine biosynthesis
Dfer_3732	PWY-7153	grixazone biosynthesis
Dfer_3732	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Dfer_3735	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
Dfer_3743	PWY-6599	guanine and guanosine salvage II
Dfer_3743	PWY-6609	adenine and adenosine salvage III
Dfer_3743	PWY-6610	adenine and adenosine salvage IV
Dfer_3743	PWY-6620	guanine and guanosine salvage
Dfer_3763	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Dfer_3775	PWY-6654	phosphopantothenate biosynthesis III
Dfer_3782	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
Dfer_3782	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
Dfer_3785	PWY-66	GDP-L-fucose biosynthesis I (from GDP-D-mannose)
Dfer_3790	PWY-5958	acridone alkaloid biosynthesis
Dfer_3790	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
Dfer_3790	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
Dfer_3791	PWY-5958	acridone alkaloid biosynthesis
Dfer_3791	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
Dfer_3791	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
Dfer_3807	PWY-6853	ethylene biosynthesis II (microbes)
Dfer_3808	PWY-6891	thiazole biosynthesis II (Bacillus)
Dfer_3808	PWY-6892	thiazole biosynthesis I (E. coli)
Dfer_3808	PWY-7560	methylerythritol phosphate pathway II
Dfer_3813	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
Dfer_3813	PWY-6855	chitin degradation I (archaea)
Dfer_3813	PWY-6906	chitin derivatives degradation
Dfer_3814	PWY-1622	formaldehyde assimilation I (serine pathway)
Dfer_3814	PWY-181	photorespiration
Dfer_3814	PWY-2161	folate polyglutamylation
Dfer_3814	PWY-2201	folate transformations I
Dfer_3814	PWY-3661	glycine betaine degradation I
Dfer_3814	PWY-3661-1	glycine betaine degradation II (mammalian)
Dfer_3814	PWY-3841	folate transformations II
Dfer_3814	PWY-5497	purine nucleobases degradation II (anaerobic)
Dfer_3816	PWY-6167	flavin biosynthesis II (archaea)
Dfer_3816	PWY-6168	flavin biosynthesis III (fungi)
Dfer_3817	PWY-2941	L-lysine biosynthesis II
Dfer_3817	PWY-2942	L-lysine biosynthesis III
Dfer_3817	PWY-5097	L-lysine biosynthesis VI
Dfer_3817	PWY-6559	spermidine biosynthesis II
Dfer_3817	PWY-6562	norspermidine biosynthesis
Dfer_3817	PWY-7153	grixazone biosynthesis
Dfer_3818	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
Dfer_3826	PWY-5381	pyridine nucleotide cycling (plants)
Dfer_3826	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
Dfer_3827	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
Dfer_3834	PWY-7560	methylerythritol phosphate pathway II
Dfer_3840	PWY-5839	menaquinol-7 biosynthesis
Dfer_3840	PWY-5844	menaquinol-9 biosynthesis
Dfer_3840	PWY-5849	menaquinol-6 biosynthesis
Dfer_3840	PWY-5890	menaquinol-10 biosynthesis
Dfer_3840	PWY-5891	menaquinol-11 biosynthesis
Dfer_3840	PWY-5892	menaquinol-12 biosynthesis
Dfer_3840	PWY-5895	menaquinol-13 biosynthesis
Dfer_3869	PWY-1042	glycolysis IV (plant cytosol)
Dfer_3869	PWY-5484	glycolysis II (from fructose 6-phosphate)
Dfer_3869	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Dfer_3869	PWY-7003	glycerol degradation to butanol
Dfer_3872	PWY-6478	GDP-D-<i>glycero</i>-&alpha;-D-<i>manno</i>-heptose biosynthesis
Dfer_3879	PWY-5316	nicotine biosynthesis
Dfer_3879	PWY-5381	pyridine nucleotide cycling (plants)
Dfer_3879	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
Dfer_3879	PWY-7342	superpathway of nicotine biosynthesis
Dfer_3891	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
Dfer_3891	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
Dfer_3891	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
Dfer_3902	PWY-4261	glycerol degradation I
Dfer_3913	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
Dfer_3913	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
Dfer_3929	PWY-1622	formaldehyde assimilation I (serine pathway)
Dfer_3929	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
Dfer_3929	PWY-5913	TCA cycle VI (obligate autotrophs)
Dfer_3929	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Dfer_3929	PWY-6146	<i>Methanobacterium thermoautotrophicum</i> biosynthetic metabolism
Dfer_3929	PWY-6549	L-glutamine biosynthesis III
Dfer_3929	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
Dfer_3929	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
Dfer_3929	PWY-7124	ethylene biosynthesis V (engineered)
Dfer_3938	PWY-4041	&gamma;-glutamyl cycle
Dfer_3938	PWY-5826	hypoglycin biosynthesis
Dfer_3942	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
Dfer_3942	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
Dfer_3942	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
Dfer_3948	PWY-4381	fatty acid biosynthesis initiation I
Dfer_3950	PWY-7180	2'-deoxy-&alpha;-D-ribose 1-phosphate degradation
Dfer_3954	PWY-5738	GDP-6-deoxy-D-talose biosynthesis
Dfer_3954	PWY-5739	GDP-D-perosamine biosynthesis
Dfer_3954	PWY-5740	GDP-L-colitose biosynthesis
Dfer_3954	PWY-66	GDP-L-fucose biosynthesis I (from GDP-D-mannose)
Dfer_3956	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Dfer_3956	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Dfer_3966	PWY-4381	fatty acid biosynthesis initiation I
Dfer_3966	PWY-6799	fatty acid biosynthesis (plant mitochondria)
Dfer_3966	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Dfer_3970	PWY-3781	aerobic respiration I (cytochrome c)
Dfer_3970	PWY-4302	aerobic respiration III (alternative oxidase pathway)
Dfer_3970	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
Dfer_3970	PWY-5690	TCA cycle II (plants and fungi)
Dfer_3970	PWY-6728	methylaspartate cycle
Dfer_3970	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Dfer_3970	PWY-7254	TCA cycle VII (acetate-producers)
Dfer_3970	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Dfer_3971	PWY-3781	aerobic respiration I (cytochrome c)
Dfer_3971	PWY-4302	aerobic respiration III (alternative oxidase pathway)
Dfer_3971	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
Dfer_3971	PWY-5690	TCA cycle II (plants and fungi)
Dfer_3971	PWY-6728	methylaspartate cycle
Dfer_3971	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Dfer_3971	PWY-7254	TCA cycle VII (acetate-producers)
Dfer_3971	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Dfer_3995	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
Dfer_3995	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
Dfer_4002	PWY-6167	flavin biosynthesis II (archaea)
Dfer_4002	PWY-6168	flavin biosynthesis III (fungi)
Dfer_4002	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
Dfer_4023	PWY-5839	menaquinol-7 biosynthesis
Dfer_4023	PWY-5844	menaquinol-9 biosynthesis
Dfer_4023	PWY-5849	menaquinol-6 biosynthesis
Dfer_4023	PWY-5890	menaquinol-10 biosynthesis
Dfer_4023	PWY-5891	menaquinol-11 biosynthesis
Dfer_4023	PWY-5892	menaquinol-12 biosynthesis
Dfer_4023	PWY-5895	menaquinol-13 biosynthesis
Dfer_4064	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Dfer_4092	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Dfer_4096	PWY-5484	glycolysis II (from fructose 6-phosphate)
Dfer_4109	PWY-4261	glycerol degradation I
Dfer_4111	PWY-7560	methylerythritol phosphate pathway II
Dfer_4123	PWY-7242	D-fructuronate degradation
Dfer_4124	PWY-7247	&beta;-D-glucuronide and D-glucuronate degradation
Dfer_4124	PWY-7248	pectin degradation III
Dfer_4126	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
Dfer_4126	PWY-6507	4-deoxy-L-<i>threo</i>-hex-4-enopyranuronate degradation
Dfer_4126	PWY-7242	D-fructuronate degradation
Dfer_4126	PWY-7310	D-glucosaminate degradation
Dfer_4139	PWY-6807	xyloglucan degradation II (exoglucanase)
Dfer_4140	PWY-3961	phosphopantothenate biosynthesis II
Dfer_4151	PWY-4381	fatty acid biosynthesis initiation I
Dfer_4174	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Dfer_4174	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Dfer_4178	PWY-4983	L-citrulline-nitric oxide cycle
Dfer_4178	PWY-4984	urea cycle
Dfer_4178	PWY-5	canavanine biosynthesis
Dfer_4178	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Dfer_4178	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Dfer_4203	PWY-6854	ethylene biosynthesis III (microbes)
Dfer_4244	PWY-6349	CDP-archaeol biosynthesis
Dfer_4252	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Dfer_4252	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Dfer_4255	PWY-3841	folate transformations II
Dfer_4255	PWY-6614	tetrahydrofolate biosynthesis
Dfer_4262	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Dfer_4292	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
Dfer_4306	PWY-7242	D-fructuronate degradation
Dfer_4321	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Dfer_4327	PWY-6902	chitin degradation II
Dfer_4372	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Dfer_4372	PWY-5686	UMP biosynthesis
Dfer_4372	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Dfer_4373	PWY-1042	glycolysis IV (plant cytosol)
Dfer_4373	PWY-1622	formaldehyde assimilation I (serine pathway)
Dfer_4373	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
Dfer_4373	PWY-5484	glycolysis II (from fructose 6-phosphate)
Dfer_4373	PWY-5723	Rubisco shunt
Dfer_4373	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Dfer_4373	PWY-6886	1-butanol autotrophic biosynthesis
Dfer_4373	PWY-6901	superpathway of glucose and xylose degradation
Dfer_4373	PWY-7003	glycerol degradation to butanol
Dfer_4373	PWY-7124	ethylene biosynthesis V (engineered)
Dfer_4373	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
Dfer_4375	PWY-1042	glycolysis IV (plant cytosol)
Dfer_4375	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
Dfer_4375	PWY-5484	glycolysis II (from fructose 6-phosphate)
Dfer_4375	PWY-5723	Rubisco shunt
Dfer_4375	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Dfer_4375	PWY-6886	1-butanol autotrophic biosynthesis
Dfer_4375	PWY-6901	superpathway of glucose and xylose degradation
Dfer_4375	PWY-7003	glycerol degradation to butanol
Dfer_4375	PWY-7124	ethylene biosynthesis V (engineered)
Dfer_4375	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
Dfer_4379	PWY-7206	pyrimidine deoxyribonucleotides dephosphorylation
Dfer_4382	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
Dfer_4382	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
Dfer_4382	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Dfer_4382	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
Dfer_4382	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
Dfer_4382	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
Dfer_4382	PWY-7205	CMP phosphorylation
Dfer_4382	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
Dfer_4382	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Dfer_4382	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
Dfer_4382	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Dfer_4382	PWY-7224	purine deoxyribonucleosides salvage
Dfer_4382	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
Dfer_4382	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
Dfer_4393	PWY-5737	(5<i>R</i>)-carbapenem carboxylate biosynthesis
Dfer_4393	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
Dfer_4394	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
Dfer_4394	PWY-3461	L-tyrosine biosynthesis II
Dfer_4394	PWY-3462	L-phenylalanine biosynthesis II
Dfer_4394	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
Dfer_4394	PWY-6120	L-tyrosine biosynthesis III
Dfer_4394	PWY-6627	salinosporamide A biosynthesis
Dfer_4396	PWY-7199	pyrimidine deoxyribonucleosides salvage
Dfer_4410	PWY-6483	ceramide degradation
Dfer_4410	PWY-7119	sphingolipid recycling and degradation (yeast)
Dfer_4415	PWY-6749	CMP-legionaminate biosynthesis I
Dfer_4416	PWY-6823	molybdenum cofactor biosynthesis
Dfer_4416	PWY-6891	thiazole biosynthesis II (Bacillus)
Dfer_4416	PWY-6892	thiazole biosynthesis I (E. coli)
Dfer_4416	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
Dfer_4418	PWY-5686	UMP biosynthesis
Dfer_4422	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Dfer_4422	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Dfer_4424	PWY-4983	L-citrulline-nitric oxide cycle
Dfer_4424	PWY-4984	urea cycle
Dfer_4424	PWY-5	canavanine biosynthesis
Dfer_4424	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Dfer_4424	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Dfer_4441	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
Dfer_4441	PWY-6596	adenosine nucleotides degradation I
Dfer_4441	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
Dfer_4449	PWY-6898	thiamin salvage III
Dfer_4449	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
Dfer_4449	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
Dfer_4459	PWY-1622	formaldehyde assimilation I (serine pathway)
Dfer_4459	PWY-5392	reductive TCA cycle II
Dfer_4459	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
Dfer_4459	PWY-5690	TCA cycle II (plants and fungi)
Dfer_4459	PWY-5913	TCA cycle VI (obligate autotrophs)
Dfer_4459	PWY-6728	methylaspartate cycle
Dfer_4459	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Dfer_4459	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
Dfer_4459	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
Dfer_4462	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
Dfer_4467	PWY-5686	UMP biosynthesis
Dfer_4486	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
Dfer_4486	PWY-6855	chitin degradation I (archaea)
Dfer_4486	PWY-6906	chitin derivatives degradation
Dfer_4487	PWY-6906	chitin derivatives degradation
Dfer_4487	PWY-7077	<i>N</i>-acetyl-D-galactosamine degradation
Dfer_4487	PWY-7395	D-galactosamine and <i>N</i>-acetyl-D-galactosamine degradation
Dfer_4491	PWY-6483	ceramide degradation
Dfer_4491	PWY-7119	sphingolipid recycling and degradation (yeast)
Dfer_4522	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
Dfer_4530	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Dfer_4530	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Dfer_4539	PWY-7254	TCA cycle VII (acetate-producers)
Dfer_4546	PWY-7193	pyrimidine ribonucleosides salvage I
Dfer_4555	PWY-5155	&beta;-alanine biosynthesis III
Dfer_4558	PWY-622	starch biosynthesis
Dfer_4559	PWY-6749	CMP-legionaminate biosynthesis I
Dfer_4563	PWY-5101	L-isoleucine biosynthesis II
Dfer_4563	PWY-5103	L-isoleucine biosynthesis III
Dfer_4563	PWY-5104	L-isoleucine biosynthesis IV
Dfer_4563	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Dfer_4579	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Dfer_4602	PWY-5833	CDP-4-dehydro-3,6-dideoxy-D-glucose biosynthesis
Dfer_4603	PWY-5833	CDP-4-dehydro-3,6-dideoxy-D-glucose biosynthesis
Dfer_4603	PWY-5940	streptomycin biosynthesis
Dfer_4625	PWY-3801	sucrose degradation II (sucrose synthase)
Dfer_4625	PWY-6527	stachyose degradation
Dfer_4625	PWY-6981	chitin biosynthesis
Dfer_4625	PWY-7238	sucrose biosynthesis II
Dfer_4625	PWY-7343	UDP-glucose biosynthesis
Dfer_4626	PWY-3821	galactose degradation III
Dfer_4626	PWY-6317	galactose degradation I (Leloir pathway)
Dfer_4626	PWY-6527	stachyose degradation
Dfer_4632	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Dfer_4665	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
Dfer_4665	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Dfer_4665	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
Dfer_4665	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
Dfer_4670	PWY-381	nitrate reduction II (assimilatory)
Dfer_4670	PWY-5675	nitrate reduction V (assimilatory)
Dfer_4670	PWY-6549	L-glutamine biosynthesis III
Dfer_4670	PWY-6963	ammonia assimilation cycle I
Dfer_4670	PWY-6964	ammonia assimilation cycle II
Dfer_4713	PWY-7165	L-ascorbate biosynthesis VI (engineered pathway)
Dfer_4719	PWY-4702	phytate degradation I
Dfer_4733	PWY-5316	nicotine biosynthesis
Dfer_4733	PWY-7342	superpathway of nicotine biosynthesis
Dfer_4734	PWY-5316	nicotine biosynthesis
Dfer_4734	PWY-7342	superpathway of nicotine biosynthesis
Dfer_4753	PWY-5530	sorbitol biosynthesis II
Dfer_4780	PWY-5194	siroheme biosynthesis
Dfer_4780	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
Dfer_4791	PWY-7335	UDP-<i>N</i>-acetyl-&alpha;-D-mannosaminouronate biosynthesis
Dfer_4804	PWY-4261	glycerol degradation I
Dfer_4811	PWY-3841	folate transformations II
Dfer_4811	PWY-6614	tetrahydrofolate biosynthesis
Dfer_4826	PWY-6897	thiamin salvage II
Dfer_4826	PWY-7353	4-methyl-5(&beta;-hydroxyethyl)thiazole salvage (yeast)
Dfer_4826	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
Dfer_4827	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
Dfer_4827	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
Dfer_4827	PWY-6897	thiamin salvage II
Dfer_4827	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
Dfer_4827	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
Dfer_4827	PWY-7353	4-methyl-5(&beta;-hydroxyethyl)thiazole salvage (yeast)
Dfer_4827	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
Dfer_4828	PWY-6910	hydroxymethylpyrimidine salvage
Dfer_4828	PWY-7356	thiamin salvage IV (yeast)
Dfer_4828	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
Dfer_4829	PWY-6899	base-degraded thiamin salvage
Dfer_4829	PWY-7356	thiamin salvage IV (yeast)
Dfer_4832	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
Dfer_4832	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
Dfer_4864	PWY-6784	cellulose and hemicellulose degradation (cellulolosome)
Dfer_4868	PWY-3121	linamarin degradation
Dfer_4868	PWY-5176	coumarin biosynthesis (via 2-coumarate)
Dfer_4868	PWY-6002	lotaustralin degradation
Dfer_4868	PWY-6788	cellulose degradation II (fungi)
Dfer_4868	PWY-7089	taxiphyllin bioactivation
Dfer_4868	PWY-7091	linustatin bioactivation
Dfer_4868	PWY-7092	neolinustatin bioactivation
Dfer_4888	PWY-7039	phosphatidate metabolism, as a signaling molecule
Dfer_4911	PWY-5381	pyridine nucleotide cycling (plants)
Dfer_4937	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Dfer_4937	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Dfer_4939	PWY-6749	CMP-legionaminate biosynthesis I
Dfer_4988	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
Dfer_4994	PWY-6672	<i>cis</i>-genanyl-CoA degradation
Dfer_4994	PWY-7118	chitin degradation to ethanol
Dfer_4997	PWY-2301	<i>myo</i>-inositol biosynthesis
Dfer_4997	PWY-4702	phytate degradation I
Dfer_4997	PWY-6363	D-<i>myo</i>-inositol (1,4,5)-trisphosphate degradation
Dfer_5000	PWY-7158	L-phenylalanine degradation V
Dfer_5002	PWY-3841	folate transformations II
Dfer_5002	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Dfer_5002	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
Dfer_5002	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
Dfer_5002	PWY-7199	pyrimidine deoxyribonucleosides salvage
Dfer_5002	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
Dfer_5009	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Dfer_5042	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
Dfer_5042	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
Dfer_5045	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Dfer_5045	PWY-5723	Rubisco shunt
Dfer_5048	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
Dfer_5048	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
Dfer_5065	PWY-4381	fatty acid biosynthesis initiation I
Dfer_5066	PWY-5669	phosphatidylethanolamine biosynthesis I
Dfer_5077	PWY-6784	cellulose and hemicellulose degradation (cellulolosome)
Dfer_5089	PWY-6938	NADH repair
Dfer_5091	PWY-2941	L-lysine biosynthesis II
Dfer_5091	PWY-5097	L-lysine biosynthesis VI
Dfer_5105	PWY-6891	thiazole biosynthesis II (Bacillus)
Dfer_5105	PWY-6892	thiazole biosynthesis I (E. coli)
Dfer_5105	PWY-7560	methylerythritol phosphate pathway II
Dfer_5109	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Dfer_5109	PWY-5723	Rubisco shunt
Dfer_5112	PWY-2941	L-lysine biosynthesis II
Dfer_5112	PWY-2942	L-lysine biosynthesis III
Dfer_5112	PWY-5097	L-lysine biosynthesis VI
Dfer_5138	PWY-5791	1,4-dihydroxy-2-naphthoate biosynthesis II (plants)
Dfer_5138	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
Dfer_5138	PWY-5901	2,3-dihydroxybenzoate biosynthesis
Dfer_5138	PWY-6406	salicylate biosynthesis I
Dfer_5147	PWY-5663	tetrahydrobiopterin biosynthesis I
Dfer_5147	PWY-5664	tetrahydrobiopterin biosynthesis II
Dfer_5147	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
Dfer_5147	PWY-6703	preQ<sub>0</sub> biosynthesis
Dfer_5147	PWY-6983	tetrahydrobiopterin biosynthesis III
Dfer_5147	PWY-7442	drosopterin and aurodrosopterin biosynthesis
Dfer_5180	PWY-6527	stachyose degradation
Dfer_5182	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
Dfer_5183	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
Dfer_5183	PWY-6855	chitin degradation I (archaea)
Dfer_5183	PWY-6906	chitin derivatives degradation
Dfer_5192	PWY-6823	molybdenum cofactor biosynthesis
Dfer_5192	PWY-6891	thiazole biosynthesis II (Bacillus)
Dfer_5192	PWY-6892	thiazole biosynthesis I (E. coli)
Dfer_5192	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
Dfer_5202	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Dfer_5203	PWY-3961	phosphopantothenate biosynthesis II
Dfer_5252	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
Dfer_5252	PWY-5530	sorbitol biosynthesis II
Dfer_5252	PWY-7165	L-ascorbate biosynthesis VI (engineered pathway)
Dfer_5254	PWY-6483	ceramide degradation
Dfer_5254	PWY-7119	sphingolipid recycling and degradation (yeast)
Dfer_5278	PWY-4041	&gamma;-glutamyl cycle
Dfer_5278	PWY-5826	hypoglycin biosynthesis
Dfer_5287	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
Dfer_5287	PWY-6153	autoinducer AI-2 biosynthesis I
Dfer_5287	PWY-6154	autoinducer AI-2 biosynthesis II (<i>Vibrio</i>)
Dfer_5323	PWY-3781	aerobic respiration I (cytochrome c)
Dfer_5323	PWY-4521	arsenite oxidation I (respiratory)
Dfer_5323	PWY-6692	Fe(II) oxidation
Dfer_5323	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Dfer_5373	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
Dfer_5373	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
Dfer_5373	PWY-6268	adenosylcobalamin salvage from cobalamin
Dfer_5373	PWY-6269	adenosylcobalamin salvage from cobinamide II
Dfer_5374	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
Dfer_5374	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
Dfer_5374	PWY-6269	adenosylcobalamin salvage from cobinamide II
Dfer_5375	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
Dfer_5375	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
Dfer_5375	PWY-6269	adenosylcobalamin salvage from cobinamide II
Dfer_5376	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
Dfer_5376	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
Dfer_5376	PWY-6269	adenosylcobalamin salvage from cobinamide II
Dfer_5481	PWY-6123	inosine-5'-phosphate biosynthesis I
Dfer_5481	PWY-6124	inosine-5'-phosphate biosynthesis II
Dfer_5481	PWY-7234	inosine-5'-phosphate biosynthesis III
Dfer_5573	PWY-5506	methanol oxidation to formaldehyde IV
Dfer_5587	PWY-5530	sorbitol biosynthesis II
Dfer_5619	PWY-4381	fatty acid biosynthesis initiation I
Dfer_5619	PWY-5743	3-hydroxypropanoate cycle
Dfer_5619	PWY-5744	glyoxylate assimilation
Dfer_5619	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Dfer_5619	PWY-6679	jadomycin biosynthesis
Dfer_5619	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Dfer_5621	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
Dfer_5621	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
Dfer_5650	PWY-1361	benzoyl-CoA degradation I (aerobic)
Dfer_5650	PWY-5109	2-methylbutanoate biosynthesis
Dfer_5650	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
Dfer_5650	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
Dfer_5650	PWY-5177	glutaryl-CoA degradation
Dfer_5650	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Dfer_5650	PWY-6435	4-hydroxybenzoate biosynthesis V
Dfer_5650	PWY-6583	pyruvate fermentation to butanol I
Dfer_5650	PWY-6863	pyruvate fermentation to hexanol
Dfer_5650	PWY-6883	pyruvate fermentation to butanol II
Dfer_5650	PWY-6944	androstenedione degradation
Dfer_5650	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
Dfer_5650	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
Dfer_5650	PWY-7007	methyl ketone biosynthesis
Dfer_5650	PWY-7046	4-coumarate degradation (anaerobic)
Dfer_5650	PWY-7094	fatty acid salvage
Dfer_5650	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
Dfer_5650	PWY-735	jasmonic acid biosynthesis
Dfer_5650	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
Dfer_5683	PWY-6788	cellulose degradation II (fungi)
Dfer_5690	PWY-5147	oleate biosynthesis I (plants)
Dfer_5699	PWY-5642	2,4-dinitrotoluene degradation
Dfer_5699	PWY-6373	acrylate degradation
Dfer_5701	PWY-6507	4-deoxy-L-<i>threo</i>-hex-4-enopyranuronate degradation
Dfer_5725	PWY-7165	L-ascorbate biosynthesis VI (engineered pathway)
Dfer_5735	PWY-6610	adenine and adenosine salvage IV
Dfer_5748	PWY-7205	CMP phosphorylation
Dfer_5752	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
Dfer_5753	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
Dfer_5764	PWY-6123	inosine-5'-phosphate biosynthesis I
Dfer_5764	PWY-7234	inosine-5'-phosphate biosynthesis III
Dfer_5776	PWY-4981	L-proline biosynthesis II (from arginine)
Dfer_5777	PWY-4981	L-proline biosynthesis II (from arginine)
Dfer_5780	PWY-6823	molybdenum cofactor biosynthesis
Dfer_5780	PWY-6891	thiazole biosynthesis II (Bacillus)
Dfer_5780	PWY-6892	thiazole biosynthesis I (E. coli)
Dfer_5780	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
Dfer_5788	PWY-6012	acyl carrier protein metabolism I
Dfer_5788	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
Dfer_5797	PWY-4381	fatty acid biosynthesis initiation I
Dfer_5804	PWY-5743	3-hydroxypropanoate cycle
Dfer_5804	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Dfer_5804	PWY-6728	methylaspartate cycle
Dfer_5804	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
