APECO78_00010	PWY-5964	guanylyl molybdenum cofactor biosynthesis
APECO78_00090	PWY-381	nitrate reduction II (assimilatory)
APECO78_00090	PWY-5675	nitrate reduction V (assimilatory)
APECO78_00090	PWY-6549	L-glutamine biosynthesis III
APECO78_00090	PWY-6963	ammonia assimilation cycle I
APECO78_00090	PWY-6964	ammonia assimilation cycle II
APECO78_00145	PWY-7446	sulfoglycolysis
APECO78_00250	PWY-7310	D-glucosaminate degradation
APECO78_00300	PWY-6854	ethylene biosynthesis III (microbes)
APECO78_00335	PWY-1042	glycolysis IV (plant cytosol)
APECO78_00335	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
APECO78_00335	PWY-5484	glycolysis II (from fructose 6-phosphate)
APECO78_00335	PWY-7385	1,3-propanediol biosynthesis (engineered)
APECO78_00350	PWY-1042	glycolysis IV (plant cytosol)
APECO78_00350	PWY-5484	glycolysis II (from fructose 6-phosphate)
APECO78_00350	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
APECO78_00350	PWY-7003	glycerol degradation to butanol
APECO78_00380	PWY-5484	glycolysis II (from fructose 6-phosphate)
APECO78_00385	PWY-4261	glycerol degradation I
APECO78_00405	PWY-5839	menaquinol-7 biosynthesis
APECO78_00405	PWY-5851	demethylmenaquinol-9 biosynthesis
APECO78_00405	PWY-5852	demethylmenaquinol-8 biosynthesis I
APECO78_00405	PWY-5853	demethylmenaquinol-6 biosynthesis I
APECO78_00405	PWY-5890	menaquinol-10 biosynthesis
APECO78_00405	PWY-5891	menaquinol-11 biosynthesis
APECO78_00405	PWY-5892	menaquinol-12 biosynthesis
APECO78_00405	PWY-5895	menaquinol-13 biosynthesis
APECO78_00485	PWY-2941	L-lysine biosynthesis II
APECO78_00485	PWY-2942	L-lysine biosynthesis III
APECO78_00485	PWY-5097	L-lysine biosynthesis VI
APECO78_00485	PWY-6559	spermidine biosynthesis II
APECO78_00485	PWY-6562	norspermidine biosynthesis
APECO78_00485	PWY-7153	grixazone biosynthesis
APECO78_00495	PWY-2201	folate transformations I
APECO78_00495	PWY-3841	folate transformations II
APECO78_00520	PWY-6349	CDP-archaeol biosynthesis
APECO78_00525	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
APECO78_00525	PWY-5723	Rubisco shunt
APECO78_00540	PWY-7310	D-glucosaminate degradation
APECO78_00545	PWY-5480	pyruvate fermentation to ethanol I
APECO78_00545	PWY-5485	pyruvate fermentation to acetate IV
APECO78_00545	PWY-5493	reductive monocarboxylic acid cycle
APECO78_00555	PWY-7310	D-glucosaminate degradation
APECO78_00570	PWY-1622	formaldehyde assimilation I (serine pathway)
APECO78_00570	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
APECO78_00570	PWY-5913	TCA cycle VI (obligate autotrophs)
APECO78_00570	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
APECO78_00570	PWY-6146	<i>Methanobacterium thermoautotrophicum</i> biosynthetic metabolism
APECO78_00570	PWY-6549	L-glutamine biosynthesis III
APECO78_00570	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
APECO78_00570	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
APECO78_00570	PWY-7124	ethylene biosynthesis V (engineered)
APECO78_00575	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
APECO78_00580	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
APECO78_00580	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
APECO78_00585	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
APECO78_00585	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
APECO78_00590	PWY-4983	L-citrulline-nitric oxide cycle
APECO78_00590	PWY-4984	urea cycle
APECO78_00590	PWY-5	canavanine biosynthesis
APECO78_00590	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
APECO78_00590	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
APECO78_00610	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
APECO78_00635	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
APECO78_00635	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
APECO78_00640	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
APECO78_00640	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
APECO78_00645	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
APECO78_00645	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
APECO78_00650	PWY-3961	phosphopantothenate biosynthesis II
APECO78_00710	PWY-6892	thiazole biosynthesis I (E. coli)
APECO78_00710	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
APECO78_00715	PWY-6891	thiazole biosynthesis II (Bacillus)
APECO78_00715	PWY-6892	thiazole biosynthesis I (E. coli)
APECO78_00725	PWY-6891	thiazole biosynthesis II (Bacillus)
APECO78_00725	PWY-6892	thiazole biosynthesis I (E. coli)
APECO78_00730	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
APECO78_00730	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
APECO78_00730	PWY-6897	thiamin salvage II
APECO78_00730	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
APECO78_00730	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
APECO78_00730	PWY-7353	4-methyl-5(&beta;-hydroxyethyl)thiazole salvage (yeast)
APECO78_00730	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
APECO78_00735	PWY-6890	4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis
APECO78_00745	PWY-5381	pyridine nucleotide cycling (plants)
APECO78_00750	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
APECO78_00750	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
APECO78_00790	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
APECO78_00790	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
APECO78_00790	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
APECO78_00795	PWY-6123	inosine-5'-phosphate biosynthesis I
APECO78_00795	PWY-6124	inosine-5'-phosphate biosynthesis II
APECO78_00795	PWY-7234	inosine-5'-phosphate biosynthesis III
APECO78_00815	PWY-6728	methylaspartate cycle
APECO78_00815	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
APECO78_00815	PWY-7118	chitin degradation to ethanol
APECO78_00815	PWY-7294	xylose degradation IV
APECO78_00815	PWY-7295	L-arabinose degradation IV
APECO78_00820	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
APECO78_00840	PWY-2201	folate transformations I
APECO78_00840	PWY-3841	folate transformations II
APECO78_00875	PWY-7310	D-glucosaminate degradation
APECO78_00920	PWY-2941	L-lysine biosynthesis II
APECO78_00920	PWY-2942	L-lysine biosynthesis III
APECO78_00920	PWY-5097	L-lysine biosynthesis VI
APECO78_00920	PWY-6559	spermidine biosynthesis II
APECO78_00920	PWY-6562	norspermidine biosynthesis
APECO78_00920	PWY-7153	grixazone biosynthesis
APECO78_00925	PWY-3801	sucrose degradation II (sucrose synthase)
APECO78_00925	PWY-5054	sorbitol biosynthesis I
APECO78_00925	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
APECO78_00925	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
APECO78_00925	PWY-5659	GDP-mannose biosynthesis
APECO78_00925	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
APECO78_00925	PWY-621	sucrose degradation III (sucrose invertase)
APECO78_00925	PWY-622	starch biosynthesis
APECO78_00925	PWY-6531	mannitol cycle
APECO78_00925	PWY-6981	chitin biosynthesis
APECO78_00925	PWY-7238	sucrose biosynthesis II
APECO78_00925	PWY-7347	sucrose biosynthesis III
APECO78_00925	PWY-7385	1,3-propanediol biosynthesis (engineered)
APECO78_01015	PWY-5755	4-hydroxybenzoate biosynthesis II (microbes)
APECO78_01015	PWY-5870	ubiquinol-8 biosynthesis (eukaryotic)
APECO78_01015	PWY-6148	tetrahydromethanopterin biosynthesis
APECO78_01025	PWY-5667	CDP-diacylglycerol biosynthesis I
APECO78_01025	PWY-7411	superpathway of phosphatidate biosynthesis (yeast)
APECO78_01030	PWY-7039	phosphatidate metabolism, as a signaling molecule
APECO78_01175	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
APECO78_01180	PWY-5913	TCA cycle VI (obligate autotrophs)
APECO78_01180	PWY-6318	L-phenylalanine degradation IV (mammalian, via side chain)
APECO78_01180	PWY-6638	sulfolactate degradation III
APECO78_01180	PWY-6642	(<i>R</i>)-cysteate degradation
APECO78_01180	PWY-6643	coenzyme M biosynthesis II
APECO78_01180	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
APECO78_01180	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
APECO78_01180	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
APECO78_01190	PWY-6348	phosphate acquisition
APECO78_01190	PWY-6357	phosphate utilization in cell wall regeneration
APECO78_01190	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
APECO78_01190	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
APECO78_01260	PWY-6672	<i>cis</i>-genanyl-CoA degradation
APECO78_01260	PWY-7118	chitin degradation to ethanol
APECO78_01265	PWY-5674	nitrate reduction IV (dissimilatory)
APECO78_01310	PWY-1881	formate oxidation to CO<sub>2</sub>
APECO78_01310	PWY-5497	purine nucleobases degradation II (anaerobic)
APECO78_01310	PWY-6696	oxalate degradation III
APECO78_01350	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
APECO78_01350	PWY-5723	Rubisco shunt
APECO78_01395	PWY-5532	adenosine nucleotides degradation IV
APECO78_01400	PWY-7399	methylphosphonate degradation II
APECO78_01405	PWY-7399	methylphosphonate degradation II
APECO78_01415	PWY-7399	methylphosphonate degradation II
APECO78_01430	PWY-7399	methylphosphonate degradation II
APECO78_01540	PWY-5392	reductive TCA cycle II
APECO78_01540	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
APECO78_01540	PWY-5690	TCA cycle II (plants and fungi)
APECO78_01540	PWY-5913	TCA cycle VI (obligate autotrophs)
APECO78_01540	PWY-6728	methylaspartate cycle
APECO78_01540	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
APECO78_01540	PWY-7254	TCA cycle VII (acetate-producers)
APECO78_01540	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
APECO78_01635	PWY-5392	reductive TCA cycle II
APECO78_01635	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
APECO78_01635	PWY-5690	TCA cycle II (plants and fungi)
APECO78_01635	PWY-5913	TCA cycle VI (obligate autotrophs)
APECO78_01635	PWY-6728	methylaspartate cycle
APECO78_01635	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
APECO78_01635	PWY-7254	TCA cycle VII (acetate-producers)
APECO78_01635	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
APECO78_01720	PWY-3781	aerobic respiration I (cytochrome c)
APECO78_01720	PWY-4302	aerobic respiration III (alternative oxidase pathway)
APECO78_01720	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
APECO78_01720	PWY-5690	TCA cycle II (plants and fungi)
APECO78_01720	PWY-6728	methylaspartate cycle
APECO78_01720	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
APECO78_01720	PWY-7254	TCA cycle VII (acetate-producers)
APECO78_01720	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
APECO78_01725	PWY-3781	aerobic respiration I (cytochrome c)
APECO78_01725	PWY-4302	aerobic respiration III (alternative oxidase pathway)
APECO78_01725	PWY-5392	reductive TCA cycle II
APECO78_01725	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
APECO78_01725	PWY-5690	TCA cycle II (plants and fungi)
APECO78_01725	PWY-5913	TCA cycle VI (obligate autotrophs)
APECO78_01725	PWY-6728	methylaspartate cycle
APECO78_01725	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
APECO78_01725	PWY-7254	TCA cycle VII (acetate-producers)
APECO78_01725	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
APECO78_01725	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
APECO78_01745	PWY-5669	phosphatidylethanolamine biosynthesis I
APECO78_01765	PWY-6938	NADH repair
APECO78_01785	PWY-2781	<i>cis</i>-zeatin biosynthesis
APECO78_01815	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
APECO78_01900	PWY-7310	D-glucosaminate degradation
APECO78_01910	PWY-5686	UMP biosynthesis
APECO78_01910	PWY-6961	L-ascorbate degradation II (bacterial, aerobic)
APECO78_01915	PWY-6961	L-ascorbate degradation II (bacterial, aerobic)
APECO78_01920	PWY-6961	L-ascorbate degradation II (bacterial, aerobic)
APECO78_02130	PWY-5484	glycolysis II (from fructose 6-phosphate)
APECO78_02160	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
APECO78_02160	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
APECO78_02160	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
APECO78_02170	PWY-7310	D-glucosaminate degradation
APECO78_02195	PWY-5686	UMP biosynthesis
APECO78_02240	PWY-4981	L-proline biosynthesis II (from arginine)
APECO78_02240	PWY-4984	urea cycle
APECO78_02240	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
APECO78_02270	PWY-5988	wound-induced proteolysis I
APECO78_02270	PWY-6018	seed germination protein turnover
APECO78_02310	PWY-5530	sorbitol biosynthesis II
APECO78_02310	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
APECO78_02560	PWY-6754	<i>S</i>-methyl-5'-thioadenosine degradation I
APECO78_02565	PWY-4361	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation
APECO78_02565	PWY-7174	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation II
APECO78_02595	PWY-5101	L-isoleucine biosynthesis II
APECO78_02595	PWY-5103	L-isoleucine biosynthesis III
APECO78_02595	PWY-5104	L-isoleucine biosynthesis IV
APECO78_02595	PWY-7111	pyruvate fermentation to isobutanol (engineered)
APECO78_02600	PWY-2941	L-lysine biosynthesis II
APECO78_02600	PWY-2942	L-lysine biosynthesis III
APECO78_02600	PWY-5097	L-lysine biosynthesis VI
APECO78_02615	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
APECO78_02615	PWY-5723	Rubisco shunt
APECO78_02635	PWY-7310	D-glucosaminate degradation
APECO78_02750	PWY-7242	D-fructuronate degradation
APECO78_02880	PWY-7431	aromatic biogenic amine degradation (bacteria)
APECO78_03140	PWY-6902	chitin degradation II
APECO78_03350	PWY-7180	2'-deoxy-&alpha;-D-ribose 1-phosphate degradation
APECO78_03365	PWY-7180	2'-deoxy-&alpha;-D-ribose 1-phosphate degradation
APECO78_03370	PWY-4202	arsenate detoxification I (glutaredoxin)
APECO78_03370	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
APECO78_03370	PWY-6608	guanosine nucleotides degradation III
APECO78_03370	PWY-6609	adenine and adenosine salvage III
APECO78_03370	PWY-6611	adenine and adenosine salvage V
APECO78_03370	PWY-6620	guanine and guanosine salvage
APECO78_03370	PWY-6627	salinosporamide A biosynthesis
APECO78_03370	PWY-6644	fluoroacetate and fluorothreonine biosynthesis
APECO78_03370	PWY-7179	purine deoxyribonucleosides degradation I
APECO78_03370	PWY-7179-1	purine deoxyribonucleosides degradation
APECO78_03380	PWY-6984	lipoate salvage II
APECO78_03380	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
APECO78_03380	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
APECO78_03465	PWY-2941	L-lysine biosynthesis II
APECO78_03465	PWY-2942	L-lysine biosynthesis III
APECO78_03465	PWY-5097	L-lysine biosynthesis VI
APECO78_03465	PWY-6559	spermidine biosynthesis II
APECO78_03465	PWY-6562	norspermidine biosynthesis
APECO78_03465	PWY-7153	grixazone biosynthesis
APECO78_03470	PWY-702	L-methionine biosynthesis II
APECO78_03495	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
APECO78_03495	PWY-5723	Rubisco shunt
APECO78_03585	PWY-5523	5,6-dimethylbenzimidazole biosynthesis
APECO78_03585	PWY-6167	flavin biosynthesis II (archaea)
APECO78_03585	PWY-6168	flavin biosynthesis III (fungi)
APECO78_03605	PWY-7560	methylerythritol phosphate pathway II
APECO78_03615	PWY-2941	L-lysine biosynthesis II
APECO78_03615	PWY-2942	L-lysine biosynthesis III
APECO78_03615	PWY-5097	L-lysine biosynthesis VI
APECO78_03620	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
APECO78_03620	PWY-5686	UMP biosynthesis
APECO78_03620	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
APECO78_03625	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
APECO78_03625	PWY-5686	UMP biosynthesis
APECO78_03625	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
APECO78_03690	PWY-6785	hydrogen production VIII
APECO78_03700	PWY-3841	folate transformations II
APECO78_03700	PWY-6614	tetrahydrofolate biosynthesis
APECO78_03755	PWY-6961	L-ascorbate degradation II (bacterial, aerobic)
APECO78_03820	PWY-7396	butanol and isobutanol biosynthesis (engineered)
APECO78_03825	PWY-6871	3-methylbutanol biosynthesis
APECO78_03840	PWY-5101	L-isoleucine biosynthesis II
APECO78_03840	PWY-5103	L-isoleucine biosynthesis III
APECO78_03840	PWY-5104	L-isoleucine biosynthesis IV
APECO78_03840	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
APECO78_03840	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
APECO78_03840	PWY-6389	(<i>S</i>)-acetoin biosynthesis
APECO78_03840	PWY-7111	pyruvate fermentation to isobutanol (engineered)
APECO78_03845	PWY-5101	L-isoleucine biosynthesis II
APECO78_03845	PWY-5103	L-isoleucine biosynthesis III
APECO78_03845	PWY-5104	L-isoleucine biosynthesis IV
APECO78_03845	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
APECO78_03845	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
APECO78_03845	PWY-6389	(<i>S</i>)-acetoin biosynthesis
APECO78_03845	PWY-7111	pyruvate fermentation to isobutanol (engineered)
APECO78_03880	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
APECO78_03880	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
APECO78_03885	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
APECO78_03885	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
APECO78_03885	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
APECO78_03890	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
APECO78_03890	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
APECO78_03900	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
APECO78_03900	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
APECO78_03900	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
APECO78_03900	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
APECO78_03905	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
APECO78_03905	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
APECO78_03910	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
APECO78_03910	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
APECO78_03945	PWY-6502	oxidized GTP and dGTP detoxification
APECO78_03985	PWY-5316	nicotine biosynthesis
APECO78_03985	PWY-5381	pyridine nucleotide cycling (plants)
APECO78_03985	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
APECO78_03985	PWY-7342	superpathway of nicotine biosynthesis
APECO78_04010	PWY-6891	thiazole biosynthesis II (Bacillus)
APECO78_04010	PWY-6892	thiazole biosynthesis I (E. coli)
APECO78_04010	PWY-7560	methylerythritol phosphate pathway II
APECO78_04020	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
APECO78_04020	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
APECO78_04030	PWY-5747	2-methylcitrate cycle II
APECO78_04040	PWY-6834	spermidine biosynthesis III
APECO78_04065	PWY-6599	guanine and guanosine salvage II
APECO78_04065	PWY-6609	adenine and adenosine salvage III
APECO78_04065	PWY-6610	adenine and adenosine salvage IV
APECO78_04065	PWY-6620	guanine and guanosine salvage
APECO78_04070	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
APECO78_04070	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
APECO78_04070	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
APECO78_04070	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
APECO78_04095	PWY-5155	&beta;-alanine biosynthesis III
APECO78_04110	PWY-6654	phosphopantothenate biosynthesis III
APECO78_04150	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
APECO78_04150	PWY-6148	tetrahydromethanopterin biosynthesis
APECO78_04150	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
APECO78_04150	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
APECO78_04185	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
APECO78_04185	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
APECO78_04185	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
APECO78_04185	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
APECO78_04210	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
APECO78_04235	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
APECO78_04235	PWY-6153	autoinducer AI-2 biosynthesis I
APECO78_04235	PWY-6154	autoinducer AI-2 biosynthesis II (<i>Vibrio</i>)
APECO78_04295	PWY-7560	methylerythritol phosphate pathway II
APECO78_04330	PWY-5971	palmitate biosynthesis II (bacteria and plants)
APECO78_04330	PWY-5973	<i>cis</i>-vaccenate biosynthesis
APECO78_04330	PWY-5989	stearate biosynthesis II (bacteria and plants)
APECO78_04330	PWY-5994	palmitate biosynthesis I (animals and fungi)
APECO78_04330	PWY-6113	superpathway of mycolate biosynthesis
APECO78_04330	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
APECO78_04330	PWY-6519	8-amino-7-oxononanoate biosynthesis I
APECO78_04330	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
APECO78_04330	PWYG-321	mycolate biosynthesis
APECO78_04355	PWY-4381	fatty acid biosynthesis initiation I
APECO78_04355	PWY-5743	3-hydroxypropanoate cycle
APECO78_04355	PWY-5744	glyoxylate assimilation
APECO78_04355	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
APECO78_04355	PWY-6679	jadomycin biosynthesis
APECO78_04355	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
APECO78_04475	PWY-5386	methylglyoxal degradation I
APECO78_04550	PWY-6478	GDP-D-<i>glycero</i>-&alpha;-D-<i>manno</i>-heptose biosynthesis
APECO78_05080	PWY-3722	glycine betaine biosynthesis II (Gram-positive bacteria)
APECO78_05080	PWY-7494	choline degradation IV
APECO78_05085	PWY-3722	glycine betaine biosynthesis II (Gram-positive bacteria)
APECO78_05085	PWY-7494	choline degradation IV
APECO78_05130	PWY-5392	reductive TCA cycle II
APECO78_05130	PWY-5537	pyruvate fermentation to acetate V
APECO78_05130	PWY-5538	pyruvate fermentation to acetate VI
APECO78_05130	PWY-5690	TCA cycle II (plants and fungi)
APECO78_05130	PWY-5913	TCA cycle VI (obligate autotrophs)
APECO78_05130	PWY-6728	methylaspartate cycle
APECO78_05130	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
APECO78_05130	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
APECO78_05180	PWY-5747	2-methylcitrate cycle II
APECO78_05195	PWY-3941	&beta;-alanine biosynthesis II
APECO78_05195	PWY-5104	L-isoleucine biosynthesis IV
APECO78_05195	PWY-5747	2-methylcitrate cycle II
APECO78_05215	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
APECO78_05215	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
APECO78_05215	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
APECO78_05215	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
APECO78_05240	PWY-6807	xyloglucan degradation II (exoglucanase)
APECO78_05255	PWY-6690	cinnamate and 3-hydroxycinnamate degradation to 2-oxopent-4-enoate
APECO78_05260	PWY-6690	cinnamate and 3-hydroxycinnamate degradation to 2-oxopent-4-enoate
APECO78_05265	PWY-6690	cinnamate and 3-hydroxycinnamate degradation to 2-oxopent-4-enoate
APECO78_05270	PWY-5162	2-oxopentenoate degradation
APECO78_05275	PWY-5162	2-oxopentenoate degradation
APECO78_05275	PWY-5436	L-threonine degradation IV
APECO78_05275	PWY-5480	pyruvate fermentation to ethanol I
APECO78_05275	PWY-6587	pyruvate fermentation to ethanol III
APECO78_05275	PWY-7085	triethylamine degradation
APECO78_05275	PWY-7180	2'-deoxy-&alpha;-D-ribose 1-phosphate degradation
APECO78_05280	PWY-5162	2-oxopentenoate degradation
APECO78_05295	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
APECO78_05300	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
APECO78_05300	PWY-3162	L-tryptophan degradation V (side chain pathway)
APECO78_05300	PWY-5057	L-valine degradation II
APECO78_05300	PWY-5076	L-leucine degradation III
APECO78_05300	PWY-5078	L-isoleucine degradation II
APECO78_05300	PWY-5079	L-phenylalanine degradation III
APECO78_05300	PWY-5082	L-methionine degradation III
APECO78_05300	PWY-5480	pyruvate fermentation to ethanol I
APECO78_05300	PWY-5486	pyruvate fermentation to ethanol II
APECO78_05300	PWY-5751	phenylethanol biosynthesis
APECO78_05300	PWY-6028	acetoin degradation
APECO78_05300	PWY-6313	serotonin degradation
APECO78_05300	PWY-6333	acetaldehyde biosynthesis I
APECO78_05300	PWY-6342	noradrenaline and adrenaline degradation
APECO78_05300	PWY-6587	pyruvate fermentation to ethanol III
APECO78_05300	PWY-6802	salidroside biosynthesis
APECO78_05300	PWY-6871	3-methylbutanol biosynthesis
APECO78_05300	PWY-7013	L-1,2-propanediol degradation
APECO78_05300	PWY-7111	pyruvate fermentation to isobutanol (engineered)
APECO78_05300	PWY-7118	chitin degradation to ethanol
APECO78_05300	PWY-7396	butanol and isobutanol biosynthesis (engineered)
APECO78_05300	PWY-7557	dehydrodiconiferyl alcohol degradation
APECO78_05350	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
APECO78_05350	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
APECO78_05405	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
APECO78_05405	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
APECO78_05420	PWY-5491	diethylphosphate degradation
APECO78_05435	PWY-3341	L-proline biosynthesis III
APECO78_05435	PWY-4981	L-proline biosynthesis II (from arginine)
APECO78_05435	PWY-6344	L-ornithine degradation II (Stickland reaction)
APECO78_05445	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
APECO78_05520	PWY-842	starch degradation I
APECO78_05525	PWY-6012	acyl carrier protein metabolism I
APECO78_05530	PWY-6700	queuosine biosynthesis
APECO78_05535	PWY-6700	queuosine biosynthesis
APECO78_05585	PWY-6167	flavin biosynthesis II (archaea)
APECO78_05585	PWY-6168	flavin biosynthesis III (fungi)
APECO78_05595	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
APECO78_05595	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
APECO78_05595	PWY-6896	thiamin salvage I
APECO78_05595	PWY-6897	thiamin salvage II
APECO78_05600	PWY-5269	cardiolipin biosynthesis II
APECO78_05600	PWY-5668	cardiolipin biosynthesis I
APECO78_05610	PWY-6891	thiazole biosynthesis II (Bacillus)
APECO78_05610	PWY-6892	thiazole biosynthesis I (E. coli)
APECO78_05610	PWY-7560	methylerythritol phosphate pathway II
APECO78_05635	PWY-6654	phosphopantothenate biosynthesis III
APECO78_05665	PWY-3781	aerobic respiration I (cytochrome c)
APECO78_05665	PWY-4521	arsenite oxidation I (respiratory)
APECO78_05665	PWY-6692	Fe(II) oxidation
APECO78_05665	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
APECO78_05665	PWY-7544	pyruvate to cytochrome <i>bo</i> oxidase electron transfer
APECO78_05745	PWY-6703	preQ<sub>0</sub> biosynthesis
APECO78_05865	PWY-6605	adenine and adenosine salvage II
APECO78_05865	PWY-6610	adenine and adenosine salvage IV
APECO78_05890	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
APECO78_06020	PWY-5694	allantoin degradation to glyoxylate I
APECO78_06020	PWY-5705	allantoin degradation to glyoxylate III
APECO78_06055	PWY-5697	allantoin degradation to ureidoglycolate I (urea producing)
APECO78_06055	PWY-5698	allantoin degradation to ureidoglycolate II (ammonia producing)
APECO78_06070	PWY-5692	allantoin degradation to glyoxylate II
APECO78_06070	PWY-5698	allantoin degradation to ureidoglycolate II (ammonia producing)
APECO78_06085	PWY-5392	reductive TCA cycle II
APECO78_06085	PWY-5537	pyruvate fermentation to acetate V
APECO78_06085	PWY-5538	pyruvate fermentation to acetate VI
APECO78_06085	PWY-5690	TCA cycle II (plants and fungi)
APECO78_06085	PWY-5913	TCA cycle VI (obligate autotrophs)
APECO78_06085	PWY-6728	methylaspartate cycle
APECO78_06085	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
APECO78_06085	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
APECO78_06115	PWY-6123	inosine-5'-phosphate biosynthesis I
APECO78_06115	PWY-7234	inosine-5'-phosphate biosynthesis III
APECO78_06145	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
APECO78_06145	PWY-2201	folate transformations I
APECO78_06145	PWY-3841	folate transformations II
APECO78_06145	PWY-5030	L-histidine degradation III
APECO78_06145	PWY-5497	purine nucleobases degradation II (anaerobic)
APECO78_06145	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
APECO78_06480	PWY-6840	homoglutathione biosynthesis
APECO78_06480	PWY-7255	ergothioneine biosynthesis I (bacteria)
APECO78_06490	PWY-6012	acyl carrier protein metabolism I
APECO78_06490	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
APECO78_06545	PWY-5791	1,4-dihydroxy-2-naphthoate biosynthesis II (plants)
APECO78_06545	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
APECO78_06545	PWY-5901	2,3-dihydroxybenzoate biosynthesis
APECO78_06545	PWY-6406	salicylate biosynthesis I
APECO78_06555	PWY-5901	2,3-dihydroxybenzoate biosynthesis
APECO78_06560	PWY-5901	2,3-dihydroxybenzoate biosynthesis
APECO78_06580	PWY-6349	CDP-archaeol biosynthesis
APECO78_06645	PWY-5796	malonate decarboxylase activation
APECO78_06655	PWY-6038	citrate degradation
APECO78_06660	PWY-5392	reductive TCA cycle II
APECO78_06660	PWY-6038	citrate degradation
APECO78_06715	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
APECO78_06715	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
APECO78_06715	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
APECO78_06730	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
APECO78_06730	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
APECO78_06740	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
APECO78_06740	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
APECO78_06770	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
APECO78_06770	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
APECO78_06770	PWY-6269	adenosylcobalamin salvage from cobinamide II
APECO78_06775	PWY-5381	pyridine nucleotide cycling (plants)
APECO78_06775	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
APECO78_06925	PWY-6906	chitin derivatives degradation
APECO78_06925	PWY-7077	<i>N</i>-acetyl-D-galactosamine degradation
APECO78_06925	PWY-7395	D-galactosamine and <i>N</i>-acetyl-D-galactosamine degradation
APECO78_06930	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
APECO78_06930	PWY-6855	chitin degradation I (archaea)
APECO78_06930	PWY-6906	chitin derivatives degradation
APECO78_06935	PWY-7310	D-glucosaminate degradation
APECO78_06940	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
APECO78_06985	PWY-2723	trehalose degradation V
APECO78_06985	PWY-3801	sucrose degradation II (sucrose synthase)
APECO78_06985	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
APECO78_06985	PWY-5661	GDP-glucose biosynthesis
APECO78_06985	PWY-5661-1	APECO78_06985|APECO78_06985|YP_007380572.1|GeneID:14481374
APECO78_06985	PWY-5940	streptomycin biosynthesis
APECO78_06985	PWY-5941	glycogen degradation II (eukaryotic)
APECO78_06985	PWY-622	starch biosynthesis
APECO78_06985	PWY-6731	starch degradation III
APECO78_06985	PWY-6737	starch degradation V
APECO78_06985	PWY-6749	CMP-legionaminate biosynthesis I
APECO78_06985	PWY-7238	sucrose biosynthesis II
APECO78_06985	PWY-7343	UDP-glucose biosynthesis
APECO78_06995	PWY-46	putrescine biosynthesis III
APECO78_06995	PWY-6305	putrescine biosynthesis IV
APECO78_07075	PWY-5663	tetrahydrobiopterin biosynthesis I
APECO78_07075	PWY-5664	tetrahydrobiopterin biosynthesis II
APECO78_07075	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
APECO78_07075	PWY-6703	preQ<sub>0</sub> biosynthesis
APECO78_07075	PWY-6983	tetrahydrobiopterin biosynthesis III
APECO78_07075	PWY-7442	drosopterin and aurodrosopterin biosynthesis
APECO78_07140	PWY-3781	aerobic respiration I (cytochrome c)
APECO78_07140	PWY-4302	aerobic respiration III (alternative oxidase pathway)
APECO78_07140	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
APECO78_07140	PWY-5690	TCA cycle II (plants and fungi)
APECO78_07140	PWY-6728	methylaspartate cycle
APECO78_07140	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
APECO78_07140	PWY-7254	TCA cycle VII (acetate-producers)
APECO78_07140	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
APECO78_07145	PWY-3781	aerobic respiration I (cytochrome c)
APECO78_07145	PWY-4302	aerobic respiration III (alternative oxidase pathway)
APECO78_07145	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
APECO78_07145	PWY-5690	TCA cycle II (plants and fungi)
APECO78_07145	PWY-6728	methylaspartate cycle
APECO78_07145	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
APECO78_07145	PWY-7254	TCA cycle VII (acetate-producers)
APECO78_07145	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
APECO78_07155	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
APECO78_07160	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
APECO78_07165	PWY-5392	reductive TCA cycle II
APECO78_07165	PWY-5537	pyruvate fermentation to acetate V
APECO78_07165	PWY-5538	pyruvate fermentation to acetate VI
APECO78_07165	PWY-5690	TCA cycle II (plants and fungi)
APECO78_07165	PWY-5913	TCA cycle VI (obligate autotrophs)
APECO78_07165	PWY-6728	methylaspartate cycle
APECO78_07165	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
APECO78_07165	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
APECO78_07170	PWY-5392	reductive TCA cycle II
APECO78_07170	PWY-5537	pyruvate fermentation to acetate V
APECO78_07170	PWY-5538	pyruvate fermentation to acetate VI
APECO78_07170	PWY-5690	TCA cycle II (plants and fungi)
APECO78_07170	PWY-5913	TCA cycle VI (obligate autotrophs)
APECO78_07170	PWY-6728	methylaspartate cycle
APECO78_07170	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
APECO78_07170	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
APECO78_07180	PWY-7310	D-glucosaminate degradation
APECO78_07200	PWY-7545	pyruvate to cytochrome <i>bd</i> terminal oxidase electron transfer
APECO78_07245	PWY-5316	nicotine biosynthesis
APECO78_07245	PWY-7342	superpathway of nicotine biosynthesis
APECO78_07265	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
APECO78_07265	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
APECO78_07265	PWY-6164	3-dehydroquinate biosynthesis I
APECO78_07270	PWY-1622	formaldehyde assimilation I (serine pathway)
APECO78_07270	PWY-5484	glycolysis II (from fructose 6-phosphate)
APECO78_07275	PWY-2723	trehalose degradation V
APECO78_07275	PWY-6317	galactose degradation I (Leloir pathway)
APECO78_07275	PWY-6737	starch degradation V
APECO78_07280	PWY-3821	galactose degradation III
APECO78_07280	PWY-6317	galactose degradation I (Leloir pathway)
APECO78_07280	PWY-6527	stachyose degradation
APECO78_07285	PWY-6317	galactose degradation I (Leloir pathway)
APECO78_07285	PWY-6527	stachyose degradation
APECO78_07290	PWY-3821	galactose degradation III
APECO78_07290	PWY-6317	galactose degradation I (Leloir pathway)
APECO78_07290	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
APECO78_07290	PWY-6527	stachyose degradation
APECO78_07290	PWY-7328	superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
APECO78_07290	PWY-7344	UDP-D-galactose biosynthesis
APECO78_07355	PWY-1081	homogalacturonan degradation
APECO78_07355	PWY-7246	pectin degradation II
APECO78_07355	PWY-7248	pectin degradation III
APECO78_07545	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
APECO78_07550	PWY-6519	8-amino-7-oxononanoate biosynthesis I
APECO78_07550	PWY-6578	8-amino-7-oxononanoate biosynthesis III
APECO78_07550	PWY-7147	8-amino-7-oxononanoate biosynthesis II
APECO78_07555	PWY-6519	8-amino-7-oxononanoate biosynthesis I
APECO78_07560	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
APECO78_07575	PWY-6823	molybdenum cofactor biosynthesis
APECO78_07595	PWY-6823	molybdenum cofactor biosynthesis
APECO78_07785	PWY-5480	pyruvate fermentation to ethanol I
APECO78_07785	PWY-5485	pyruvate fermentation to acetate IV
APECO78_07785	PWY-5493	reductive monocarboxylic acid cycle
APECO78_07795	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
APECO78_07795	PWY-5723	Rubisco shunt
APECO78_07800	PWY-6823	molybdenum cofactor biosynthesis
APECO78_07805	PWY-6823	molybdenum cofactor biosynthesis
APECO78_07865	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
APECO78_07865	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
APECO78_08235	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
APECO78_08495	PWY-5480	pyruvate fermentation to ethanol I
APECO78_08495	PWY-5485	pyruvate fermentation to acetate IV
APECO78_08495	PWY-5493	reductive monocarboxylic acid cycle
APECO78_08520	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
APECO78_08530	PWY-7205	CMP phosphorylation
APECO78_08570	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
APECO78_08570	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
APECO78_08625	PWY-5913	TCA cycle VI (obligate autotrophs)
APECO78_08625	PWY-6318	L-phenylalanine degradation IV (mammalian, via side chain)
APECO78_08625	PWY-6638	sulfolactate degradation III
APECO78_08625	PWY-6642	(<i>R</i>)-cysteate degradation
APECO78_08625	PWY-6643	coenzyme M biosynthesis II
APECO78_08625	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
APECO78_08625	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
APECO78_08625	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
APECO78_08645	PWY-5381	pyridine nucleotide cycling (plants)
APECO78_08715	PWY-5686	UMP biosynthesis
APECO78_08760	PWY-5971	palmitate biosynthesis II (bacteria and plants)
APECO78_08760	PWY-5973	<i>cis</i>-vaccenate biosynthesis
APECO78_08760	PWY-5989	stearate biosynthesis II (bacteria and plants)
APECO78_08760	PWY-5994	palmitate biosynthesis I (animals and fungi)
APECO78_08760	PWY-6113	superpathway of mycolate biosynthesis
APECO78_08760	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
APECO78_08760	PWY-6519	8-amino-7-oxononanoate biosynthesis I
APECO78_08760	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
APECO78_08760	PWYG-321	mycolate biosynthesis
APECO78_09010	PWY-6785	hydrogen production VIII
APECO78_09060	PWY-5737	(5<i>R</i>)-carbapenem carboxylate biosynthesis
APECO78_09060	PWY-6853	ethylene biosynthesis II (microbes)
APECO78_09060	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
APECO78_09135	PWY-1622	formaldehyde assimilation I (serine pathway)
APECO78_09275	PWY-5686	UMP biosynthesis
APECO78_09415	PWY-4381	fatty acid biosynthesis initiation I
APECO78_09420	PWY-4381	fatty acid biosynthesis initiation I
APECO78_09420	PWY-6799	fatty acid biosynthesis (plant mitochondria)
APECO78_09420	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
APECO78_09425	PWY-5367	petroselinate biosynthesis
APECO78_09425	PWY-5971	palmitate biosynthesis II (bacteria and plants)
APECO78_09425	PWY-5973	<i>cis</i>-vaccenate biosynthesis
APECO78_09425	PWY-5989	stearate biosynthesis II (bacteria and plants)
APECO78_09425	PWY-5994	palmitate biosynthesis I (animals and fungi)
APECO78_09425	PWY-6113	superpathway of mycolate biosynthesis
APECO78_09425	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
APECO78_09425	PWY-6519	8-amino-7-oxononanoate biosynthesis I
APECO78_09425	PWY-6951	APECO78_09425|fabG|YP_007381060.1|GeneID:14481862
APECO78_09425	PWY-7053	docosahexaenoate biosynthesis I (lower eukaryotes)
APECO78_09425	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
APECO78_09425	PWYG-321	mycolate biosynthesis
APECO78_09440	PWY-6543	4-aminobenzoate biosynthesis
APECO78_09440	PWY-6722	candicidin biosynthesis
APECO78_09450	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
APECO78_09450	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
APECO78_09450	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
APECO78_09450	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
APECO78_09450	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
APECO78_09450	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
APECO78_09465	PWY-7310	D-glucosaminate degradation
APECO78_09490	PWY-6896	thiamin salvage I
APECO78_09495	PWY-6902	chitin degradation II
APECO78_09555	PWY-6517	<i>N</i>-acetylglucosamine degradation II
APECO78_09555	PWY-6906	chitin derivatives degradation
APECO78_09615	PWY-6123	inosine-5'-phosphate biosynthesis I
APECO78_09615	PWY-6124	inosine-5'-phosphate biosynthesis II
APECO78_09615	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
APECO78_09615	PWY-7234	inosine-5'-phosphate biosynthesis III
APECO78_09640	PWY-5913	TCA cycle VI (obligate autotrophs)
APECO78_09640	PWY-6549	L-glutamine biosynthesis III
APECO78_09640	PWY-6728	methylaspartate cycle
APECO78_09640	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
APECO78_09640	PWY-7124	ethylene biosynthesis V (engineered)
APECO78_09640	PWY-7254	TCA cycle VII (acetate-producers)
APECO78_09640	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
APECO78_09815	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
APECO78_09915	PWY-7560	methylerythritol phosphate pathway II
APECO78_09925	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
APECO78_09950	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
APECO78_09950	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
APECO78_10030	PWY-2201	folate transformations I
APECO78_10030	PWY-5497	purine nucleobases degradation II (anaerobic)
APECO78_10050	PWY-3801	sucrose degradation II (sucrose synthase)
APECO78_10050	PWY-6527	stachyose degradation
APECO78_10050	PWY-6981	chitin biosynthesis
APECO78_10050	PWY-7238	sucrose biosynthesis II
APECO78_10050	PWY-7343	UDP-glucose biosynthesis
APECO78_10060	PWY-7199	pyrimidine deoxyribonucleosides salvage
APECO78_10065	PWY-3162	L-tryptophan degradation V (side chain pathway)
APECO78_10065	PWY-5057	L-valine degradation II
APECO78_10065	PWY-5076	L-leucine degradation III
APECO78_10065	PWY-5078	L-isoleucine degradation II
APECO78_10065	PWY-5079	L-phenylalanine degradation III
APECO78_10065	PWY-5082	L-methionine degradation III
APECO78_10065	PWY-5162	2-oxopentenoate degradation
APECO78_10065	PWY-5436	L-threonine degradation IV
APECO78_10065	PWY-5480	pyruvate fermentation to ethanol I
APECO78_10065	PWY-5486	pyruvate fermentation to ethanol II
APECO78_10065	PWY-5751	phenylethanol biosynthesis
APECO78_10065	PWY-6028	acetoin degradation
APECO78_10065	PWY-6313	serotonin degradation
APECO78_10065	PWY-6333	acetaldehyde biosynthesis I
APECO78_10065	PWY-6342	noradrenaline and adrenaline degradation
APECO78_10065	PWY-6587	pyruvate fermentation to ethanol III
APECO78_10065	PWY-6802	salidroside biosynthesis
APECO78_10065	PWY-6871	3-methylbutanol biosynthesis
APECO78_10065	PWY-7013	L-1,2-propanediol degradation
APECO78_10065	PWY-7085	triethylamine degradation
APECO78_10065	PWY-7111	pyruvate fermentation to isobutanol (engineered)
APECO78_10065	PWY-7118	chitin degradation to ethanol
APECO78_10065	PWY-7180	2'-deoxy-&alpha;-D-ribose 1-phosphate degradation
APECO78_10065	PWY-7396	butanol and isobutanol biosynthesis (engineered)
APECO78_10065	PWY-7557	dehydrodiconiferyl alcohol degradation
APECO78_10180	PWY-5958	acridone alkaloid biosynthesis
APECO78_10180	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
APECO78_10180	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
APECO78_10185	PWY-5958	acridone alkaloid biosynthesis
APECO78_10185	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
APECO78_10185	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
APECO78_10205	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
APECO78_10205	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
APECO78_10205	PWY-6268	adenosylcobalamin salvage from cobalamin
APECO78_10205	PWY-6269	adenosylcobalamin salvage from cobinamide II
APECO78_10255	PWY-6168	flavin biosynthesis III (fungi)
APECO78_10255	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
APECO78_10275	PWY-5686	UMP biosynthesis
APECO78_10315	PWY-5971	palmitate biosynthesis II (bacteria and plants)
APECO78_10315	PWY-5973	<i>cis</i>-vaccenate biosynthesis
APECO78_10315	PWY-5989	stearate biosynthesis II (bacteria and plants)
APECO78_10315	PWY-6113	superpathway of mycolate biosynthesis
APECO78_10315	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
APECO78_10315	PWY-6519	8-amino-7-oxononanoate biosynthesis I
APECO78_10315	PWY-7096	triclosan resistance
APECO78_10315	PWYG-321	mycolate biosynthesis
APECO78_10360	PWY-381	nitrate reduction II (assimilatory)
APECO78_10360	PWY-5675	nitrate reduction V (assimilatory)
APECO78_10360	PWY-6549	L-glutamine biosynthesis III
APECO78_10360	PWY-6963	ammonia assimilation cycle I
APECO78_10360	PWY-6964	ammonia assimilation cycle II
APECO78_10415	PWY-5350	thiosulfate disproportionation III (rhodanese)
APECO78_10420	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
APECO78_10460	PWY-2721	trehalose degradation III
APECO78_10460	PWY-2722	trehalose degradation IV
APECO78_10460	PWY-6317	galactose degradation I (Leloir pathway)
APECO78_10460	PWY-7459	kojibiose degradation
APECO78_10665	PWY-5751	phenylethanol biosynthesis
APECO78_10710	PWY-1361	benzoyl-CoA degradation I (aerobic)
APECO78_10710	PWY-5109	2-methylbutanoate biosynthesis
APECO78_10710	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
APECO78_10710	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
APECO78_10710	PWY-5177	glutaryl-CoA degradation
APECO78_10710	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
APECO78_10710	PWY-6435	4-hydroxybenzoate biosynthesis V
APECO78_10710	PWY-6583	pyruvate fermentation to butanol I
APECO78_10710	PWY-6863	pyruvate fermentation to hexanol
APECO78_10710	PWY-6883	pyruvate fermentation to butanol II
APECO78_10710	PWY-6944	androstenedione degradation
APECO78_10710	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
APECO78_10710	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
APECO78_10710	PWY-7007	methyl ketone biosynthesis
APECO78_10710	PWY-7046	4-coumarate degradation (anaerobic)
APECO78_10710	PWY-7094	fatty acid salvage
APECO78_10710	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
APECO78_10710	PWY-735	jasmonic acid biosynthesis
APECO78_10710	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
APECO78_10720	PWY-1361	benzoyl-CoA degradation I (aerobic)
APECO78_10720	PWY-2361	3-oxoadipate degradation
APECO78_10720	PWY-6185	4-methylcatechol degradation (<i>ortho</i> cleavage)
APECO78_10725	PWY-1341	phenylacetate degradation II (anaerobic)
APECO78_10725	PWY-6318	L-phenylalanine degradation IV (mammalian, via side chain)
APECO78_10795	PWY-1042	glycolysis IV (plant cytosol)
APECO78_10795	PWY-5484	glycolysis II (from fructose 6-phosphate)
APECO78_10795	PWY-6901	superpathway of glucose and xylose degradation
APECO78_10795	PWY-7003	glycerol degradation to butanol
APECO78_10935	PWY-2	putrescine degradation IV
APECO78_10935	PWY-3	putrescine degradation V
APECO78_11035	PWY-7153	grixazone biosynthesis
APECO78_11165	PWY-6454	vancomycin resistance I
APECO78_11165	PWY-6455	vancomycin resistance II
APECO78_11190	PWY-4321	L-glutamate degradation IV
APECO78_11300	PWY-4261	glycerol degradation I
APECO78_11430	PWY-7310	D-glucosaminate degradation
APECO78_11435	PWY-7310	D-glucosaminate degradation
APECO78_11765	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
APECO78_11860	PWY-5392	reductive TCA cycle II
APECO78_11860	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
APECO78_11860	PWY-5690	TCA cycle II (plants and fungi)
APECO78_11860	PWY-5913	TCA cycle VI (obligate autotrophs)
APECO78_11860	PWY-6728	methylaspartate cycle
APECO78_11860	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
APECO78_11860	PWY-7254	TCA cycle VII (acetate-producers)
APECO78_11860	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
APECO78_11865	PWY-5392	reductive TCA cycle II
APECO78_11865	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
APECO78_11865	PWY-5690	TCA cycle II (plants and fungi)
APECO78_11865	PWY-5913	TCA cycle VI (obligate autotrophs)
APECO78_11865	PWY-6728	methylaspartate cycle
APECO78_11865	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
APECO78_11865	PWY-7254	TCA cycle VII (acetate-producers)
APECO78_11865	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
APECO78_11870	PWY-3861	mannitol degradation II
APECO78_11870	PWY-3881	mannitol biosynthesis
APECO78_11870	PWY-5659	GDP-mannose biosynthesis
APECO78_11870	PWY-7456	mannan degradation
APECO78_11870	PWY-882	L-ascorbate biosynthesis I (L-galactose pathway)
APECO78_11895	PWY-6807	xyloglucan degradation II (exoglucanase)
APECO78_11915	PWY-7310	D-glucosaminate degradation
APECO78_11920	PWY-6936	seleno-amino acid biosynthesis
APECO78_11925	PWY-6609	adenine and adenosine salvage III
APECO78_11925	PWY-6611	adenine and adenosine salvage V
APECO78_11925	PWY-7179	purine deoxyribonucleosides degradation I
APECO78_11925	PWY-7179-1	purine deoxyribonucleosides degradation
APECO78_12000	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
APECO78_12000	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
APECO78_12010	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
APECO78_12010	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
APECO78_12050	PWY-6854	ethylene biosynthesis III (microbes)
APECO78_12075	PWY-5386	methylglyoxal degradation I
APECO78_12100	PWY-6854	ethylene biosynthesis III (microbes)
APECO78_12135	PWY-6167	flavin biosynthesis II (archaea)
APECO78_12135	PWY-6168	flavin biosynthesis III (fungi)
APECO78_12135	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
APECO78_12195	PWY-1042	glycolysis IV (plant cytosol)
APECO78_12195	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
APECO78_12195	PWY-5484	glycolysis II (from fructose 6-phosphate)
APECO78_12195	PWY-5723	Rubisco shunt
APECO78_12195	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
APECO78_12195	PWY-6886	1-butanol autotrophic biosynthesis
APECO78_12195	PWY-6901	superpathway of glucose and xylose degradation
APECO78_12195	PWY-7003	glycerol degradation to butanol
APECO78_12195	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
APECO78_12195	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
APECO78_12215	PWY-6823	molybdenum cofactor biosynthesis
APECO78_12215	PWY-6891	thiazole biosynthesis II (Bacillus)
APECO78_12215	PWY-6892	thiazole biosynthesis I (E. coli)
APECO78_12215	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
APECO78_12255	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
APECO78_12255	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
APECO78_12280	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
APECO78_12285	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
APECO78_12285	PWY-6416	quinate degradation II
APECO78_12285	PWY-6707	gallate biosynthesis
APECO78_12335	PWY-5484	glycolysis II (from fructose 6-phosphate)
APECO78_12345	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
APECO78_12345	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
APECO78_12345	PWY-6164	3-dehydroquinate biosynthesis I
APECO78_12490	PWY-5506	methanol oxidation to formaldehyde IV
APECO78_12515	PWY-7310	D-glucosaminate degradation
APECO78_12520	PWY-7310	D-glucosaminate degradation
APECO78_12620	PWY-5350	thiosulfate disproportionation III (rhodanese)
APECO78_12655	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
APECO78_12690	PWY-1042	glycolysis IV (plant cytosol)
APECO78_12690	PWY-5484	glycolysis II (from fructose 6-phosphate)
APECO78_12690	PWY-6901	superpathway of glucose and xylose degradation
APECO78_12690	PWY-7003	glycerol degradation to butanol
APECO78_12695	PWY-2723	trehalose degradation V
APECO78_12695	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
APECO78_12695	PWY-5661	GDP-glucose biosynthesis
APECO78_12695	PWY-5940	streptomycin biosynthesis
APECO78_12695	PWY-621	sucrose degradation III (sucrose invertase)
APECO78_12695	PWY-622	starch biosynthesis
APECO78_12695	PWY-6731	starch degradation III
APECO78_12695	PWY-6737	starch degradation V
APECO78_12695	PWY-6981	chitin biosynthesis
APECO78_12695	PWY-7238	sucrose biosynthesis II
APECO78_12695	PWY-7343	UDP-glucose biosynthesis
APECO78_12860	PWY-5958	acridone alkaloid biosynthesis
APECO78_12860	PWY-6543	4-aminobenzoate biosynthesis
APECO78_12860	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
APECO78_12860	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
APECO78_12860	PWY-6722	candicidin biosynthesis
APECO78_12885	PWY-7310	D-glucosaminate degradation
APECO78_13065	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
APECO78_13065	PWY-6507	4-deoxy-L-<i>threo</i>-hex-4-enopyranuronate degradation
APECO78_13065	PWY-7242	D-fructuronate degradation
APECO78_13065	PWY-7310	D-glucosaminate degradation
APECO78_13070	PWY-5101	L-isoleucine biosynthesis II
APECO78_13070	PWY-5103	L-isoleucine biosynthesis III
APECO78_13070	PWY-5104	L-isoleucine biosynthesis IV
APECO78_13070	PWY-7111	pyruvate fermentation to isobutanol (engineered)
APECO78_13075	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
APECO78_13085	PWY-1042	glycolysis IV (plant cytosol)
APECO78_13085	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
APECO78_13085	PWY-5484	glycolysis II (from fructose 6-phosphate)
APECO78_13085	PWY-5723	Rubisco shunt
APECO78_13085	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
APECO78_13085	PWY-6886	1-butanol autotrophic biosynthesis
APECO78_13085	PWY-6901	superpathway of glucose and xylose degradation
APECO78_13085	PWY-7003	glycerol degradation to butanol
APECO78_13085	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
APECO78_13085	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
APECO78_13340	PWY-5269	cardiolipin biosynthesis II
APECO78_13340	PWY-5668	cardiolipin biosynthesis I
APECO78_13425	PWY-842	starch degradation I
APECO78_13495	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
APECO78_13560	PWY-5656	mannosylglycerate biosynthesis I
APECO78_13615	PWY-901	methylglyoxal degradation II
APECO78_13630	PWY-5691	urate degradation to allantoin I
APECO78_13630	PWY-7394	urate degradation to allantoin II
APECO78_13720	PWY-6617	adenosine nucleotides degradation III
APECO78_13750	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
APECO78_13750	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
APECO78_13750	PWY-6269	adenosylcobalamin salvage from cobinamide II
APECO78_13755	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
APECO78_13755	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
APECO78_13755	PWY-6269	adenosylcobalamin salvage from cobinamide II
APECO78_13760	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
APECO78_13760	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
APECO78_13760	PWY-6269	adenosylcobalamin salvage from cobinamide II
APECO78_13785	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
APECO78_13785	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
APECO78_13875	PWY-7346	UDP-&alpha;-D-glucuronate biosynthesis (from UDP-glucose)
APECO78_13920	PWY-6749	CMP-legionaminate biosynthesis I
APECO78_13925	PWY-5659	GDP-mannose biosynthesis
APECO78_13925	PWY-6073	alginate biosynthesis I (algal)
APECO78_13925	PWY-6082	alginate biosynthesis II (bacterial)
APECO78_13925	PWY-882	L-ascorbate biosynthesis I (L-galactose pathway)
APECO78_13940	PWY-3801	sucrose degradation II (sucrose synthase)
APECO78_13940	PWY-6527	stachyose degradation
APECO78_13940	PWY-6981	chitin biosynthesis
APECO78_13940	PWY-7238	sucrose biosynthesis II
APECO78_13940	PWY-7343	UDP-glucose biosynthesis
APECO78_13965	PWY-6655	xanthan biosynthesis
APECO78_13965	PWY-6658	acetan biosynthesis
APECO78_13970	PWY-6749	CMP-legionaminate biosynthesis I
APECO78_13975	PWY-5659	GDP-mannose biosynthesis
APECO78_13975	PWY-6073	alginate biosynthesis I (algal)
APECO78_13975	PWY-6082	alginate biosynthesis II (bacterial)
APECO78_13975	PWY-882	L-ascorbate biosynthesis I (L-galactose pathway)
APECO78_13990	PWY-66	GDP-L-fucose biosynthesis I (from GDP-D-mannose)
APECO78_13995	PWY-5738	GDP-6-deoxy-D-talose biosynthesis
APECO78_13995	PWY-5739	GDP-D-perosamine biosynthesis
APECO78_13995	PWY-5740	GDP-L-colitose biosynthesis
APECO78_13995	PWY-66	GDP-L-fucose biosynthesis I (from GDP-D-mannose)
APECO78_14020	PWY-6936	seleno-amino acid biosynthesis
APECO78_14020	PWY-7274	D-cycloserine biosynthesis
APECO78_14055	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
APECO78_14060	PWY-7193	pyrimidine ribonucleosides salvage I
APECO78_14175	PWY-7310	D-glucosaminate degradation
APECO78_14190	PWY-7077	<i>N</i>-acetyl-D-galactosamine degradation
APECO78_14190	PWY-7395	D-galactosamine and <i>N</i>-acetyl-D-galactosamine degradation
APECO78_14230	PWY-6910	hydroxymethylpyrimidine salvage
APECO78_14230	PWY-7356	thiamin salvage IV (yeast)
APECO78_14230	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
APECO78_14235	PWY-6897	thiamin salvage II
APECO78_14235	PWY-7353	4-methyl-5(&beta;-hydroxyethyl)thiazole salvage (yeast)
APECO78_14235	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
APECO78_14380	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
APECO78_14380	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
APECO78_14380	PWY-6454	vancomycin resistance I
APECO78_14380	PWY-6901	superpathway of glucose and xylose degradation
APECO78_14430	PWY-6556	pyrimidine ribonucleosides salvage II
APECO78_14430	PWY-7181	pyrimidine deoxyribonucleosides degradation
APECO78_14430	PWY-7193	pyrimidine ribonucleosides salvage I
APECO78_14430	PWY-7199	pyrimidine deoxyribonucleosides salvage
APECO78_14480	PWY-5663	tetrahydrobiopterin biosynthesis I
APECO78_14480	PWY-5664	tetrahydrobiopterin biosynthesis II
APECO78_14480	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
APECO78_14480	PWY-6703	preQ<sub>0</sub> biosynthesis
APECO78_14480	PWY-6983	tetrahydrobiopterin biosynthesis III
APECO78_14480	PWY-7442	drosopterin and aurodrosopterin biosynthesis
APECO78_14485	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
APECO78_14545	PWY-6019	pseudouridine degradation
APECO78_14555	PWY-7310	D-glucosaminate degradation
APECO78_14720	PWY-6902	chitin degradation II
APECO78_14885	PWY-7254	TCA cycle VII (acetate-producers)
APECO78_14990	PWY-5855	ubiquinol-7 biosynthesis (prokaryotic)
APECO78_14990	PWY-5856	ubiquinol-9 biosynthesis (prokaryotic)
APECO78_14990	PWY-5857	ubiquinol-10 biosynthesis (prokaryotic)
APECO78_14990	PWY-5870	ubiquinol-8 biosynthesis (eukaryotic)
APECO78_14990	PWY-5871	ubiquinol-9 biosynthesis (eukaryotic)
APECO78_14990	PWY-5872	ubiquinol-10 biosynthesis (eukaryotic)
APECO78_14990	PWY-5873	ubiquinol-7 biosynthesis (eukaryotic)
APECO78_14990	PWY-6708	ubiquinol-8 biosynthesis (prokaryotic)
APECO78_14990	PWY-7230	ubiquinol-6 biosynthesis from 4-aminobenzoate (eukaryotic)
APECO78_14990	PWY-7233	ubiquinol-6 bypass biosynthesis (eukaryotic)
APECO78_15000	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
APECO78_15000	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
APECO78_15000	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
APECO78_15000	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
APECO78_15000	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
APECO78_15000	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
APECO78_15000	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
APECO78_15000	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
APECO78_15005	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
APECO78_15005	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
APECO78_15005	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
APECO78_15005	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
APECO78_15005	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
APECO78_15005	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
APECO78_15005	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
APECO78_15005	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
APECO78_15040	PWY-4261	glycerol degradation I
APECO78_15040	PWY-6118	glycerol-3-phosphate shuttle
APECO78_15040	PWY-6952	glycerophosphodiester degradation
APECO78_15045	PWY-4261	glycerol degradation I
APECO78_15045	PWY-6118	glycerol-3-phosphate shuttle
APECO78_15045	PWY-6952	glycerophosphodiester degradation
APECO78_15125	PWY-5791	1,4-dihydroxy-2-naphthoate biosynthesis II (plants)
APECO78_15125	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
APECO78_15130	PWY-5791	1,4-dihydroxy-2-naphthoate biosynthesis II (plants)
APECO78_15130	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
APECO78_15135	PWY-5791	1,4-dihydroxy-2-naphthoate biosynthesis II (plants)
APECO78_15135	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
APECO78_15140	PWY-5791	1,4-dihydroxy-2-naphthoate biosynthesis II (plants)
APECO78_15140	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
APECO78_15145	PWY-5791	1,4-dihydroxy-2-naphthoate biosynthesis II (plants)
APECO78_15145	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
APECO78_15150	PWY-5791	1,4-dihydroxy-2-naphthoate biosynthesis II (plants)
APECO78_15150	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
APECO78_15150	PWY-5901	2,3-dihydroxybenzoate biosynthesis
APECO78_15150	PWY-6406	salicylate biosynthesis I
APECO78_15300	PWY-5482	pyruvate fermentation to acetate II
APECO78_15300	PWY-5485	pyruvate fermentation to acetate IV
APECO78_15300	PWY-5497	purine nucleobases degradation II (anaerobic)
APECO78_15305	PWY-1281	sulfoacetaldehyde degradation I
APECO78_15305	PWY-5482	pyruvate fermentation to acetate II
APECO78_15305	PWY-5485	pyruvate fermentation to acetate IV
APECO78_15305	PWY-5497	purine nucleobases degradation II (anaerobic)
APECO78_15305	PWY-6637	sulfolactate degradation II
APECO78_15335	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
APECO78_15335	PWY-6148	tetrahydromethanopterin biosynthesis
APECO78_15335	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
APECO78_15335	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
APECO78_15380	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
APECO78_15380	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
APECO78_15380	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
APECO78_15380	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
APECO78_15395	PWY-2161	folate polyglutamylation
APECO78_15400	PWY-4381	fatty acid biosynthesis initiation I
APECO78_15400	PWY-5743	3-hydroxypropanoate cycle
APECO78_15400	PWY-5744	glyoxylate assimilation
APECO78_15400	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
APECO78_15400	PWY-6679	jadomycin biosynthesis
APECO78_15400	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
APECO78_15415	PWY-2941	L-lysine biosynthesis II
APECO78_15415	PWY-2942	L-lysine biosynthesis III
APECO78_15415	PWY-5097	L-lysine biosynthesis VI
APECO78_15415	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
APECO78_15415	PWY-6559	spermidine biosynthesis II
APECO78_15415	PWY-6562	norspermidine biosynthesis
APECO78_15415	PWY-7153	grixazone biosynthesis
APECO78_15415	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
APECO78_15465	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
APECO78_15520	PWY-1361	benzoyl-CoA degradation I (aerobic)
APECO78_15520	PWY-5109	2-methylbutanoate biosynthesis
APECO78_15520	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
APECO78_15520	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
APECO78_15520	PWY-5177	glutaryl-CoA degradation
APECO78_15520	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
APECO78_15520	PWY-6435	4-hydroxybenzoate biosynthesis V
APECO78_15520	PWY-6583	pyruvate fermentation to butanol I
APECO78_15520	PWY-6863	pyruvate fermentation to hexanol
APECO78_15520	PWY-6883	pyruvate fermentation to butanol II
APECO78_15520	PWY-6944	androstenedione degradation
APECO78_15520	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
APECO78_15520	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
APECO78_15520	PWY-7007	methyl ketone biosynthesis
APECO78_15520	PWY-7046	4-coumarate degradation (anaerobic)
APECO78_15520	PWY-7094	fatty acid salvage
APECO78_15520	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
APECO78_15520	PWY-735	jasmonic acid biosynthesis
APECO78_15520	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
APECO78_15525	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
APECO78_15525	PWY-6435	4-hydroxybenzoate biosynthesis V
APECO78_15525	PWY-6863	pyruvate fermentation to hexanol
APECO78_15525	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
APECO78_15525	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
APECO78_15525	PWY-6948	sitosterol degradation to androstenedione
APECO78_15525	PWY-7094	fatty acid salvage
APECO78_15525	PWY-7288	fatty acid &beta;-oxidation (peroxisome, yeast)
APECO78_15525	PWY-7337	10-<i>cis</i>-heptadecenoyl-CoA degradation (yeast)
APECO78_15525	PWY-7338	10-<i>trans</i>-heptadecenoyl-CoA degradation (reductase-dependent, yeast)
APECO78_15525	PWY-7339	10-<i>trans</i>-heptadecenoyl-CoA degradation (MFE-dependent, yeast)
APECO78_15525	PWY-7340	9-<i>cis</i>, 11-<i>trans</i>-octadecadienoyl-CoA degradation (isomerase-dependent, yeast)
APECO78_15525	PWY-735	jasmonic acid biosynthesis
APECO78_15570	PWY-621	sucrose degradation III (sucrose invertase)
APECO78_15620	PWY-6695	oxalate degradation II
APECO78_15620	PWY-6696	oxalate degradation III
APECO78_15625	PWY-6695	oxalate degradation II
APECO78_15695	PWY-7310	D-glucosaminate degradation
APECO78_15700	PWY-7310	D-glucosaminate degradation
APECO78_15705	PWY-2723	trehalose degradation V
APECO78_15705	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
APECO78_15705	PWY-5661	GDP-glucose biosynthesis
APECO78_15705	PWY-7238	sucrose biosynthesis II
APECO78_15705	PWY-7385	1,3-propanediol biosynthesis (engineered)
APECO78_15745	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
APECO78_15765	PWY-4202	arsenate detoxification I (glutaredoxin)
APECO78_15765	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
APECO78_15765	PWY-6608	guanosine nucleotides degradation III
APECO78_15765	PWY-6609	adenine and adenosine salvage III
APECO78_15765	PWY-6611	adenine and adenosine salvage V
APECO78_15765	PWY-6620	guanine and guanosine salvage
APECO78_15765	PWY-6627	salinosporamide A biosynthesis
APECO78_15765	PWY-6644	fluoroacetate and fluorothreonine biosynthesis
APECO78_15765	PWY-7179	purine deoxyribonucleosides degradation I
APECO78_15765	PWY-7179-1	purine deoxyribonucleosides degradation
APECO78_15805	PWY-6936	seleno-amino acid biosynthesis
APECO78_15825	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
APECO78_15825	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
APECO78_15835	PWY-6936	seleno-amino acid biosynthesis
APECO78_15875	PWY-7310	D-glucosaminate degradation
APECO78_15910	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
APECO78_15910	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
APECO78_15980	PWY-1281	sulfoacetaldehyde degradation I
APECO78_15980	PWY-5482	pyruvate fermentation to acetate II
APECO78_15980	PWY-5485	pyruvate fermentation to acetate IV
APECO78_15980	PWY-5497	purine nucleobases degradation II (anaerobic)
APECO78_15980	PWY-6637	sulfolactate degradation II
APECO78_15985	PWY-1281	sulfoacetaldehyde degradation I
APECO78_15985	PWY-5482	pyruvate fermentation to acetate II
APECO78_15985	PWY-5485	pyruvate fermentation to acetate IV
APECO78_15985	PWY-5497	purine nucleobases degradation II (anaerobic)
APECO78_15985	PWY-6637	sulfolactate degradation II
APECO78_15990	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
APECO78_15990	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
APECO78_15990	PWY-6268	adenosylcobalamin salvage from cobalamin
APECO78_15990	PWY-6269	adenosylcobalamin salvage from cobinamide II
APECO78_16010	PWY-1281	sulfoacetaldehyde degradation I
APECO78_16010	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
APECO78_16010	PWY-5482	pyruvate fermentation to acetate II
APECO78_16010	PWY-5485	pyruvate fermentation to acetate IV
APECO78_16010	PWY-5497	purine nucleobases degradation II (anaerobic)
APECO78_16010	PWY-6637	sulfolactate degradation II
APECO78_16010	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
APECO78_16015	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
APECO78_16015	PWY-5723	Rubisco shunt
APECO78_16020	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
APECO78_16020	PWY-5723	Rubisco shunt
APECO78_16020	PWY-6891	thiazole biosynthesis II (Bacillus)
APECO78_16020	PWY-6892	thiazole biosynthesis I (E. coli)
APECO78_16020	PWY-6901	superpathway of glucose and xylose degradation
APECO78_16020	PWY-7560	methylerythritol phosphate pathway II
APECO78_16090	PWY-6123	inosine-5'-phosphate biosynthesis I
APECO78_16090	PWY-6124	inosine-5'-phosphate biosynthesis II
APECO78_16090	PWY-7234	inosine-5'-phosphate biosynthesis III
APECO78_16105	PWY-2941	L-lysine biosynthesis II
APECO78_16105	PWY-2942	L-lysine biosynthesis III
APECO78_16105	PWY-5097	L-lysine biosynthesis VI
APECO78_16200	PWY-4202	arsenate detoxification I (glutaredoxin)
APECO78_16200	PWY-4621	arsenate detoxification II (glutaredoxin)
APECO78_16215	PWY-7183	pyrimidine nucleobases salvage I
APECO78_16220	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
APECO78_16220	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
APECO78_16220	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
APECO78_16225	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
APECO78_16225	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
APECO78_16265	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
APECO78_16270	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
APECO78_16270	PWY-6596	adenosine nucleotides degradation I
APECO78_16270	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
APECO78_16305	PWY-7560	methylerythritol phosphate pathway II
APECO78_16320	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
APECO78_16320	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
APECO78_16320	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
APECO78_16320	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
APECO78_16320	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
APECO78_16320	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
APECO78_16320	PWY-7205	CMP phosphorylation
APECO78_16320	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
APECO78_16320	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
APECO78_16320	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
APECO78_16320	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
APECO78_16320	PWY-7224	purine deoxyribonucleosides salvage
APECO78_16320	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
APECO78_16320	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
APECO78_16335	PWY-5350	thiosulfate disproportionation III (rhodanese)
APECO78_16345	PWY-5988	wound-induced proteolysis I
APECO78_16345	PWY-6018	seed germination protein turnover
APECO78_16380	PWY-6823	molybdenum cofactor biosynthesis
APECO78_16380	PWY-6891	thiazole biosynthesis II (Bacillus)
APECO78_16380	PWY-6892	thiazole biosynthesis I (E. coli)
APECO78_16380	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
APECO78_16395	PWY-2301	<i>myo</i>-inositol biosynthesis
APECO78_16395	PWY-4702	phytate degradation I
APECO78_16395	PWY-6363	D-<i>myo</i>-inositol (1,4,5)-trisphosphate degradation
APECO78_16420	PWY-6690	cinnamate and 3-hydroxycinnamate degradation to 2-oxopent-4-enoate
APECO78_16425	PWY-6690	cinnamate and 3-hydroxycinnamate degradation to 2-oxopent-4-enoate
APECO78_16435	PWY-6690	cinnamate and 3-hydroxycinnamate degradation to 2-oxopent-4-enoate
APECO78_16485	PWY-1622	formaldehyde assimilation I (serine pathway)
APECO78_16485	PWY-181	photorespiration
APECO78_16485	PWY-2161	folate polyglutamylation
APECO78_16485	PWY-2201	folate transformations I
APECO78_16485	PWY-3661	glycine betaine degradation I
APECO78_16485	PWY-3661-1	glycine betaine degradation II (mammalian)
APECO78_16485	PWY-3841	folate transformations II
APECO78_16485	PWY-5497	purine nucleobases degradation II (anaerobic)
APECO78_16515	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
APECO78_16515	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
APECO78_16515	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
APECO78_16530	PWY-5269	cardiolipin biosynthesis II
APECO78_16530	PWY-5668	cardiolipin biosynthesis I
APECO78_16550	PWY-6012	acyl carrier protein metabolism I
APECO78_16550	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
APECO78_16610	PWY-5316	nicotine biosynthesis
APECO78_16610	PWY-7342	superpathway of nicotine biosynthesis
APECO78_16665	PWY-5392	reductive TCA cycle II
APECO78_16665	PWY-5537	pyruvate fermentation to acetate V
APECO78_16665	PWY-5538	pyruvate fermentation to acetate VI
APECO78_16665	PWY-5690	TCA cycle II (plants and fungi)
APECO78_16665	PWY-5913	TCA cycle VI (obligate autotrophs)
APECO78_16665	PWY-6728	methylaspartate cycle
APECO78_16665	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
APECO78_16665	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
APECO78_16670	PWY-5269	cardiolipin biosynthesis II
APECO78_16670	PWY-5668	cardiolipin biosynthesis I
APECO78_16715	PWY-3461	L-tyrosine biosynthesis II
APECO78_16715	PWY-3462	L-phenylalanine biosynthesis II
APECO78_16715	PWY-6120	L-tyrosine biosynthesis III
APECO78_16715	PWY-6627	salinosporamide A biosynthesis
APECO78_16715	PWY-7432	L-phenylalanine biosynthesis III (cytosolic, plants)
APECO78_16720	PWY-3461	L-tyrosine biosynthesis II
APECO78_16720	PWY-3462	L-phenylalanine biosynthesis II
APECO78_16720	PWY-6120	L-tyrosine biosynthesis III
APECO78_16720	PWY-6627	salinosporamide A biosynthesis
APECO78_16720	PWY-7303	3-dimethylallyl-4-hydroxybenzoate biosynthesis
APECO78_16725	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
APECO78_16725	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
APECO78_16725	PWY-6164	3-dehydroquinate biosynthesis I
APECO78_16755	PWY-6829	tRNA methylation (yeast)
APECO78_16755	PWY-7285	methylwyosine biosynthesis
APECO78_16755	PWY-7286	7-(3-amino-3-carboxypropyl)-wyosine biosynthesis
APECO78_16790	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
APECO78_16790	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
APECO78_16790	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
APECO78_16965	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
APECO78_16965	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
APECO78_16965	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
APECO78_16965	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
APECO78_16965	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
APECO78_16965	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
APECO78_16965	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
APECO78_16965	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
APECO78_16970	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
APECO78_16970	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
APECO78_16970	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
APECO78_16970	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
APECO78_16970	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
APECO78_16970	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
APECO78_16970	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
APECO78_16970	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
APECO78_17020	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
APECO78_17020	PWY-6153	autoinducer AI-2 biosynthesis I
APECO78_17020	PWY-6154	autoinducer AI-2 biosynthesis II (<i>Vibrio</i>)
APECO78_17025	PWY-6840	homoglutathione biosynthesis
APECO78_17025	PWY-7255	ergothioneine biosynthesis I (bacteria)
APECO78_17080	PWY-7310	D-glucosaminate degradation
APECO78_17140	PWY-7310	D-glucosaminate degradation
APECO78_17310	PWY-5381	pyridine nucleotide cycling (plants)
APECO78_17310	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
APECO78_17310	PWY-6596	adenosine nucleotides degradation I
APECO78_17310	PWY-6606	guanosine nucleotides degradation II
APECO78_17310	PWY-6607	guanosine nucleotides degradation I
APECO78_17310	PWY-6608	guanosine nucleotides degradation III
APECO78_17310	PWY-7185	UTP and CTP dephosphorylation I
APECO78_17320	PWY-7560	methylerythritol phosphate pathway II
APECO78_17325	PWY-7560	methylerythritol phosphate pathway II
APECO78_17340	PWY-5340	sulfate activation for sulfonation
APECO78_17345	PWY-5278	sulfite oxidation III
APECO78_17345	PWY-5340	sulfate activation for sulfonation
APECO78_17345	PWY-6683	sulfate reduction III (assimilatory)
APECO78_17345	PWY-6932	selenate reduction
APECO78_17350	PWY-5278	sulfite oxidation III
APECO78_17350	PWY-5340	sulfate activation for sulfonation
APECO78_17350	PWY-6683	sulfate reduction III (assimilatory)
APECO78_17350	PWY-6932	selenate reduction
APECO78_17425	PWY-6683	sulfate reduction III (assimilatory)
APECO78_17430	PWY-6683	sulfate reduction III (assimilatory)
APECO78_17470	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
APECO78_17470	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
APECO78_17490	PWY-6703	preQ<sub>0</sub> biosynthesis
APECO78_17510	PWY-1042	glycolysis IV (plant cytosol)
APECO78_17510	PWY-1622	formaldehyde assimilation I (serine pathway)
APECO78_17510	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
APECO78_17510	PWY-5484	glycolysis II (from fructose 6-phosphate)
APECO78_17510	PWY-5723	Rubisco shunt
APECO78_17510	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
APECO78_17510	PWY-6886	1-butanol autotrophic biosynthesis
APECO78_17510	PWY-6901	superpathway of glucose and xylose degradation
APECO78_17510	PWY-7003	glycerol degradation to butanol
APECO78_17510	PWY-7124	ethylene biosynthesis V (engineered)
APECO78_17510	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
APECO78_17515	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
APECO78_17515	PWY-7177	UTP and CTP dephosphorylation II
APECO78_17515	PWY-7185	UTP and CTP dephosphorylation I
APECO78_17550	PWY-6499	D-glucarate degradation II
APECO78_17590	PWY-6700	queuosine biosynthesis
APECO78_17620	PWY-5197	lactate biosynthesis (archaea)
APECO78_17635	PWY-4261	glycerol degradation I
APECO78_17670	PWY-6823	molybdenum cofactor biosynthesis
APECO78_17670	PWY-6891	thiazole biosynthesis II (Bacillus)
APECO78_17670	PWY-6892	thiazole biosynthesis I (E. coli)
APECO78_17670	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
APECO78_17695	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
APECO78_17740	PWY-3841	folate transformations II
APECO78_17740	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
APECO78_17740	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
APECO78_17740	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
APECO78_17740	PWY-7199	pyrimidine deoxyribonucleosides salvage
APECO78_17740	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
APECO78_17790	PWY-6622	heptadecane biosynthesis
APECO78_17790	PWY-7032	alkane biosynthesis I
APECO78_17800	PWY-2941	L-lysine biosynthesis II
APECO78_17800	PWY-2942	L-lysine biosynthesis III
APECO78_17800	PWY-5097	L-lysine biosynthesis VI
APECO78_17810	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
APECO78_17810	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
APECO78_17820	PWY-6507	4-deoxy-L-<i>threo</i>-hex-4-enopyranuronate degradation
APECO78_17825	PWY-6507	4-deoxy-L-<i>threo</i>-hex-4-enopyranuronate degradation
APECO78_18065	PWY-5686	UMP biosynthesis
APECO78_18100	PWY-6476	cytidylyl molybdenum cofactor biosynthesis
APECO78_18130	PWY-5497	purine nucleobases degradation II (anaerobic)
APECO78_18130	PWY-6606	guanosine nucleotides degradation II
APECO78_18130	PWY-6608	guanosine nucleotides degradation III
APECO78_18130	PWY-7442	drosopterin and aurodrosopterin biosynthesis
APECO78_18160	PWY-5123	<i>trans, trans</i>-farnesyl diphosphate biosynthesis
APECO78_18160	PWY-6174	mevalonate pathway II (archaea)
APECO78_18160	PWY-6383	mono-<i>trans</i>, poly-<i>cis</i> decaprenyl phosphate biosynthesis
APECO78_18160	PWY-6859	<i>all-trans</i>-farnesol biosynthesis
APECO78_18160	PWY-7102	bisabolene biosynthesis
APECO78_18160	PWY-7391	isoprene biosynthesis II (engineered)
APECO78_18160	PWY-7524	mevalonate pathway III (archaea)
APECO78_18160	PWY-7560	methylerythritol phosphate pathway II
APECO78_18160	PWY-922	mevalonate pathway I
APECO78_18280	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
APECO78_18280	PWY-5723	Rubisco shunt
APECO78_18295	PWY-5743	3-hydroxypropanoate cycle
APECO78_18295	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
APECO78_18295	PWY-6728	methylaspartate cycle
APECO78_18295	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
APECO78_18340	PWY-1042	glycolysis IV (plant cytosol)
APECO78_18340	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
APECO78_18340	PWY-5484	glycolysis II (from fructose 6-phosphate)
APECO78_18340	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
APECO78_18340	PWY-7385	1,3-propanediol biosynthesis (engineered)
APECO78_18345	PWY-1042	glycolysis IV (plant cytosol)
APECO78_18345	PWY-5484	glycolysis II (from fructose 6-phosphate)
APECO78_18345	PWY-6886	1-butanol autotrophic biosynthesis
APECO78_18345	PWY-6901	superpathway of glucose and xylose degradation
APECO78_18345	PWY-7003	glycerol degradation to butanol
APECO78_18390	PWY-5484	glycolysis II (from fructose 6-phosphate)
APECO78_18400	PWY-7310	D-glucosaminate degradation
APECO78_18410	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
APECO78_18410	PWY-5723	Rubisco shunt
APECO78_18410	PWY-6891	thiazole biosynthesis II (Bacillus)
APECO78_18410	PWY-6892	thiazole biosynthesis I (E. coli)
APECO78_18410	PWY-6901	superpathway of glucose and xylose degradation
APECO78_18410	PWY-7560	methylerythritol phosphate pathway II
APECO78_18420	PWY-40	putrescine biosynthesis I
APECO78_18420	PWY-6305	putrescine biosynthesis IV
APECO78_18430	PWY-40	putrescine biosynthesis I
APECO78_18430	PWY-43	putrescine biosynthesis II
APECO78_18430	PWY-6305	putrescine biosynthesis IV
APECO78_18430	PWY-6834	spermidine biosynthesis III
APECO78_18445	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
APECO78_18445	PWY-5912	2'-deoxymugineic acid phytosiderophore biosynthesis
APECO78_18490	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
APECO78_18505	PWY-7206	pyrimidine deoxyribonucleotides dephosphorylation
APECO78_18565	PWY-46	putrescine biosynthesis III
APECO78_18565	PWY-6305	putrescine biosynthesis IV
APECO78_18635	PWY-6728	methylaspartate cycle
APECO78_18635	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
APECO78_18635	PWY-7118	chitin degradation to ethanol
APECO78_18635	PWY-7294	xylose degradation IV
APECO78_18635	PWY-7295	L-arabinose degradation IV
APECO78_18650	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
APECO78_18650	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
APECO78_18655	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
APECO78_18655	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
APECO78_18825	PWY-6936	seleno-amino acid biosynthesis
APECO78_18870	PWY-5667	CDP-diacylglycerol biosynthesis I
APECO78_18870	PWY-5981	CDP-diacylglycerol biosynthesis III
APECO78_18870	PWY-7411	superpathway of phosphatidate biosynthesis (yeast)
APECO78_18870	PWY-7417	phospholipid remodeling (phosphatidate, yeast)
APECO78_19025	PWY-6167	flavin biosynthesis II (archaea)
APECO78_19025	PWY-6168	flavin biosynthesis III (fungi)
APECO78_19100	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
APECO78_19100	PWY-6148	tetrahydromethanopterin biosynthesis
APECO78_19100	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
APECO78_19100	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
APECO78_19170	PWY-2	putrescine degradation IV
APECO78_19170	PWY-6440	spermine and spermidine degradation II
APECO78_19185	PWY-6807	xyloglucan degradation II (exoglucanase)
APECO78_19265	PWY-7247	&beta;-D-glucuronide and D-glucuronate degradation
APECO78_19265	PWY-7248	pectin degradation III
APECO78_19350	PWY-4061	glutathione-mediated detoxification I
APECO78_19350	PWY-6842	glutathione-mediated detoxification II
APECO78_19350	PWY-7112	4-hydroxy-2-nonenal detoxification
APECO78_19350	PWY-7533	gliotoxin biosynthesis
APECO78_19405	PWY-5480	pyruvate fermentation to ethanol I
APECO78_19405	PWY-5485	pyruvate fermentation to acetate IV
APECO78_19405	PWY-5493	reductive monocarboxylic acid cycle
APECO78_19410	PWY-5437	L-threonine degradation I
APECO78_19410	PWY-5482	pyruvate fermentation to acetate II
APECO78_19410	PWY-5485	pyruvate fermentation to acetate IV
APECO78_19410	PWY-5497	purine nucleobases degradation II (anaerobic)
APECO78_19410	PWY-7013	L-1,2-propanediol degradation
APECO78_19475	PWY-6497	D-galactarate degradation II
APECO78_19500	PWY-7310	D-glucosaminate degradation
APECO78_19520	PWY-6906	chitin derivatives degradation
APECO78_19520	PWY-7077	<i>N</i>-acetyl-D-galactosamine degradation
APECO78_19520	PWY-7395	D-galactosamine and <i>N</i>-acetyl-D-galactosamine degradation
APECO78_19530	PWY-7077	<i>N</i>-acetyl-D-galactosamine degradation
APECO78_19530	PWY-7395	D-galactosamine and <i>N</i>-acetyl-D-galactosamine degradation
APECO78_19535	PWY-7310	D-glucosaminate degradation
APECO78_19550	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
APECO78_19550	PWY-6855	chitin degradation I (archaea)
APECO78_19550	PWY-6906	chitin derivatives degradation
APECO78_19635	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
APECO78_19635	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
APECO78_19635	PWY-6897	thiamin salvage II
APECO78_19635	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
APECO78_19635	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
APECO78_19635	PWY-7353	4-methyl-5(&beta;-hydroxyethyl)thiazole salvage (yeast)
APECO78_19635	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
APECO78_19700	PWY-4983	L-citrulline-nitric oxide cycle
APECO78_19700	PWY-4984	urea cycle
APECO78_19700	PWY-5	canavanine biosynthesis
APECO78_19700	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
APECO78_19700	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
APECO78_19720	PWY-6749	CMP-legionaminate biosynthesis I
APECO78_19725	PWY-6614	tetrahydrofolate biosynthesis
APECO78_19750	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
APECO78_19750	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
APECO78_19785	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
APECO78_19785	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
APECO78_19830	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
APECO78_19830	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
APECO78_19925	PWY-6138	CMP-<i>N</i>-acetylneuraminate biosynthesis I (eukaryotes)
APECO78_19940	PWY-2941	L-lysine biosynthesis II
APECO78_19940	PWY-2942	L-lysine biosynthesis III
APECO78_19940	PWY-5097	L-lysine biosynthesis VI
APECO78_19995	PWY-1622	formaldehyde assimilation I (serine pathway)
APECO78_19995	PWY-5392	reductive TCA cycle II
APECO78_19995	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
APECO78_19995	PWY-5690	TCA cycle II (plants and fungi)
APECO78_19995	PWY-5913	TCA cycle VI (obligate autotrophs)
APECO78_19995	PWY-6728	methylaspartate cycle
APECO78_19995	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
APECO78_19995	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
APECO78_19995	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
APECO78_20195	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
APECO78_20550	PWY-6785	hydrogen production VIII
APECO78_20570	PWY-5723	Rubisco shunt
APECO78_20595	PWY-5958	acridone alkaloid biosynthesis
APECO78_20595	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
APECO78_20595	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
APECO78_20620	PWY-6683	sulfate reduction III (assimilatory)
APECO78_20635	PWY-5194	siroheme biosynthesis
APECO78_20635	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
APECO78_20690	PWY-7180	2'-deoxy-&alpha;-D-ribose 1-phosphate degradation
APECO78_20695	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
APECO78_20715	PWY-181	photorespiration
APECO78_20720	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
APECO78_20720	PWY-5723	Rubisco shunt
APECO78_20735	PWY-6164	3-dehydroquinate biosynthesis I
APECO78_20740	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
APECO78_20805	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
APECO78_20805	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
APECO78_20850	PWY-6519	8-amino-7-oxononanoate biosynthesis I
APECO78_20870	PWY-5941	glycogen degradation II (eukaryotic)
APECO78_20870	PWY-6724	starch degradation II
APECO78_20870	PWY-6737	starch degradation V
APECO78_20870	PWY-7238	sucrose biosynthesis II
APECO78_20875	PWY-5941	glycogen degradation II (eukaryotic)
APECO78_20875	PWY-622	starch biosynthesis
APECO78_20875	PWY-6731	starch degradation III
APECO78_20875	PWY-6737	starch degradation V
APECO78_20875	PWY-7238	sucrose biosynthesis II
APECO78_20910	PWY-5350	thiosulfate disproportionation III (rhodanese)
APECO78_20915	PWY-4261	glycerol degradation I
APECO78_20915	PWY-6118	glycerol-3-phosphate shuttle
APECO78_20915	PWY-6952	glycerophosphodiester degradation
APECO78_20935	PWY-5941	glycogen degradation II (eukaryotic)
APECO78_20935	PWY-622	starch biosynthesis
APECO78_20935	PWY-6731	starch degradation III
APECO78_20935	PWY-6737	starch degradation V
APECO78_20935	PWY-7238	sucrose biosynthesis II
APECO78_20940	PWY-622	starch biosynthesis
APECO78_20945	PWY-622	starch biosynthesis
APECO78_20955	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
APECO78_20955	PWY-622	starch biosynthesis
APECO78_20960	PWY-2941	L-lysine biosynthesis II
APECO78_20960	PWY-2942	L-lysine biosynthesis III
APECO78_20960	PWY-5097	L-lysine biosynthesis VI
APECO78_20960	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
APECO78_20960	PWY-6559	spermidine biosynthesis II
APECO78_20960	PWY-6562	norspermidine biosynthesis
APECO78_20960	PWY-7153	grixazone biosynthesis
APECO78_20960	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
APECO78_20975	PWY-5530	sorbitol biosynthesis II
APECO78_20975	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
APECO78_21005	PWY-4041	&gamma;-glutamyl cycle
APECO78_21005	PWY-5826	hypoglycin biosynthesis
APECO78_21165	PWY-6012	acyl carrier protein metabolism I
APECO78_21165	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
APECO78_21280	PWY-4081	glutathione redox reactions I
APECO78_21300	PWY-4202	arsenate detoxification I (glutaredoxin)
APECO78_21300	PWY-4621	arsenate detoxification II (glutaredoxin)
APECO78_21375	PWY-4321	L-glutamate degradation IV
APECO78_21445	PWY-6788	cellulose degradation II (fungi)
APECO78_21455	PWY-1001	cellulose biosynthesis
APECO78_21575	PWY-1622	formaldehyde assimilation I (serine pathway)
APECO78_21630	PWY-4261	glycerol degradation I
APECO78_21665	PWY-842	starch degradation I
APECO78_21690	PWY-6961	L-ascorbate degradation II (bacterial, aerobic)
APECO78_21715	PWY-4261	glycerol degradation I
APECO78_21720	PWY-5686	UMP biosynthesis
APECO78_21725	PWY-6961	L-ascorbate degradation II (bacterial, aerobic)
APECO78_21730	PWY-6961	L-ascorbate degradation II (bacterial, aerobic)
APECO78_21825	PWY-7310	D-glucosaminate degradation
APECO78_21880	PWY-6936	seleno-amino acid biosynthesis
APECO78_21880	PWY-7274	D-cycloserine biosynthesis
APECO78_21885	PWY-5667	CDP-diacylglycerol biosynthesis I
APECO78_21885	PWY-5981	CDP-diacylglycerol biosynthesis III
APECO78_21905	PWY-1042	glycolysis IV (plant cytosol)
APECO78_21905	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
APECO78_21905	PWY-5484	glycolysis II (from fructose 6-phosphate)
APECO78_21905	PWY-5723	Rubisco shunt
APECO78_21905	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
APECO78_21905	PWY-6886	1-butanol autotrophic biosynthesis
APECO78_21905	PWY-6901	superpathway of glucose and xylose degradation
APECO78_21905	PWY-7003	glycerol degradation to butanol
APECO78_21905	PWY-7124	ethylene biosynthesis V (engineered)
APECO78_21905	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
APECO78_21925	PWY-7378	aminopropanol phosphate biosynthesis II
APECO78_22030	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
APECO78_22030	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
APECO78_22030	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
APECO78_22030	PWY-7206	pyrimidine deoxyribonucleotides dephosphorylation
APECO78_22045	PWY-5686	UMP biosynthesis
APECO78_22080	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
APECO78_22175	PWY-6610	adenine and adenosine salvage IV
APECO78_22210	PWY-5101	L-isoleucine biosynthesis II
APECO78_22210	PWY-5103	L-isoleucine biosynthesis III
APECO78_22210	PWY-5104	L-isoleucine biosynthesis IV
APECO78_22210	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
APECO78_22210	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
APECO78_22210	PWY-6389	(<i>S</i>)-acetoin biosynthesis
APECO78_22210	PWY-7111	pyruvate fermentation to isobutanol (engineered)
APECO78_22275	PWY-7310	D-glucosaminate degradation
APECO78_22325	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
APECO78_22325	PWY-6507	4-deoxy-L-<i>threo</i>-hex-4-enopyranuronate degradation
APECO78_22325	PWY-7242	D-fructuronate degradation
APECO78_22325	PWY-7310	D-glucosaminate degradation
APECO78_22330	PWY-7130	L-glucose degradation
APECO78_22430	PWY-6012	acyl carrier protein metabolism I
APECO78_22430	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
APECO78_22460	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
APECO78_22460	PWY-6855	chitin degradation I (archaea)
APECO78_22460	PWY-6906	chitin derivatives degradation
APECO78_22480	PWY-7310	D-glucosaminate degradation
APECO78_22535	PWY-6749	CMP-legionaminate biosynthesis I
APECO78_22540	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
APECO78_22550	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
APECO78_22560	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
APECO78_22685	PWY-5101	L-isoleucine biosynthesis II
APECO78_22685	PWY-5103	L-isoleucine biosynthesis III
APECO78_22685	PWY-5104	L-isoleucine biosynthesis IV
APECO78_22685	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
APECO78_22685	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
APECO78_22685	PWY-6389	(<i>S</i>)-acetoin biosynthesis
APECO78_22685	PWY-7111	pyruvate fermentation to isobutanol (engineered)
APECO78_22695	PWY-5057	L-valine degradation II
APECO78_22695	PWY-5076	L-leucine degradation III
APECO78_22695	PWY-5078	L-isoleucine degradation II
APECO78_22695	PWY-5101	L-isoleucine biosynthesis II
APECO78_22695	PWY-5103	L-isoleucine biosynthesis III
APECO78_22695	PWY-5104	L-isoleucine biosynthesis IV
APECO78_22695	PWY-5108	L-isoleucine biosynthesis V
APECO78_22700	PWY-5101	L-isoleucine biosynthesis II
APECO78_22700	PWY-5103	L-isoleucine biosynthesis III
APECO78_22700	PWY-5104	L-isoleucine biosynthesis IV
APECO78_22700	PWY-7111	pyruvate fermentation to isobutanol (engineered)
APECO78_22715	PWY-5101	L-isoleucine biosynthesis II
APECO78_22715	PWY-5103	L-isoleucine biosynthesis III
APECO78_22715	PWY-5104	L-isoleucine biosynthesis IV
APECO78_22715	PWY-7111	pyruvate fermentation to isobutanol (engineered)
APECO78_22755	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
APECO78_22765	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
APECO78_22765	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
APECO78_22765	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
APECO78_22765	PWY-7290	<i>Escherichia coli</i> serotype O86 <i>O</i>-antigen biosynthesis
APECO78_22765	PWY-7530	&beta;-D-galactosaminyl-(1&rarr;3)-<i>N</i>-acetyl-&alpha;-D-galactosamine biosynthesis
APECO78_22775	PWY-7335	UDP-<i>N</i>-acetyl-&alpha;-D-mannosaminouronate biosynthesis
APECO78_22785	PWY-3221	dTDP-L-rhamnose biosynthesis II
APECO78_22785	PWY-6808	dTDP-D-forosamine biosynthesis
APECO78_22785	PWY-6942	dTDP-D-desosamine biosynthesis
APECO78_22785	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
APECO78_22785	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
APECO78_22785	PWY-6974	dTDP-L-olivose biosynthesis
APECO78_22785	PWY-6976	dTDP-L-mycarose biosynthesis
APECO78_22785	PWY-7104	dTDP-L-megosamine biosynthesis
APECO78_22785	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
APECO78_22785	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
APECO78_22785	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
APECO78_22785	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
APECO78_22785	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
APECO78_22785	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
APECO78_22785	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
APECO78_22785	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
APECO78_22790	PWY-3221	dTDP-L-rhamnose biosynthesis II
APECO78_22790	PWY-6808	dTDP-D-forosamine biosynthesis
APECO78_22790	PWY-6942	dTDP-D-desosamine biosynthesis
APECO78_22790	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
APECO78_22790	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
APECO78_22790	PWY-6974	dTDP-L-olivose biosynthesis
APECO78_22790	PWY-6976	dTDP-L-mycarose biosynthesis
APECO78_22790	PWY-7104	dTDP-L-megosamine biosynthesis
APECO78_22790	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
APECO78_22790	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
APECO78_22790	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
APECO78_22790	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
APECO78_22790	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
APECO78_22790	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
APECO78_22790	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
APECO78_22790	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
APECO78_22795	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
APECO78_22800	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
APECO78_22850	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
APECO78_22850	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
APECO78_22855	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
APECO78_22855	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
APECO78_22880	PWY-2941	L-lysine biosynthesis II
APECO78_22880	PWY-5097	L-lysine biosynthesis VI
APECO78_22935	PWY-6803	phosphatidylcholine acyl editing
APECO78_22935	PWY-7409	phospholipid remodeling (phosphatidylethanolamine, yeast)
APECO78_22935	PWY-7416	phospholipid remodeling (phosphatidylcholine, yeast)
APECO78_22935	PWY-7417	phospholipid remodeling (phosphatidate, yeast)
APECO78_22975	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
APECO78_22975	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
APECO78_22975	PWY-6936	seleno-amino acid biosynthesis
APECO78_22975	PWY-702	L-methionine biosynthesis II
APECO78_22985	PWY-4202	arsenate detoxification I (glutaredoxin)
APECO78_22985	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
APECO78_22985	PWY-6608	guanosine nucleotides degradation III
APECO78_22985	PWY-6609	adenine and adenosine salvage III
APECO78_22985	PWY-6611	adenine and adenosine salvage V
APECO78_22985	PWY-6620	guanine and guanosine salvage
APECO78_22985	PWY-6627	salinosporamide A biosynthesis
APECO78_22985	PWY-6644	fluoroacetate and fluorothreonine biosynthesis
APECO78_22985	PWY-7179	purine deoxyribonucleosides degradation I
APECO78_22985	PWY-7179-1	purine deoxyribonucleosides degradation
APECO78_22995	PWY-5839	menaquinol-7 biosynthesis
APECO78_22995	PWY-5844	menaquinol-9 biosynthesis
APECO78_22995	PWY-5849	menaquinol-6 biosynthesis
APECO78_22995	PWY-5890	menaquinol-10 biosynthesis
APECO78_22995	PWY-5891	menaquinol-11 biosynthesis
APECO78_22995	PWY-5892	menaquinol-12 biosynthesis
APECO78_22995	PWY-5895	menaquinol-13 biosynthesis
APECO78_23045	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
APECO78_23045	PWY-6435	4-hydroxybenzoate biosynthesis V
APECO78_23045	PWY-6863	pyruvate fermentation to hexanol
APECO78_23045	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
APECO78_23045	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
APECO78_23045	PWY-6948	sitosterol degradation to androstenedione
APECO78_23045	PWY-7094	fatty acid salvage
APECO78_23045	PWY-7288	fatty acid &beta;-oxidation (peroxisome, yeast)
APECO78_23045	PWY-7337	10-<i>cis</i>-heptadecenoyl-CoA degradation (yeast)
APECO78_23045	PWY-7338	10-<i>trans</i>-heptadecenoyl-CoA degradation (reductase-dependent, yeast)
APECO78_23045	PWY-7339	10-<i>trans</i>-heptadecenoyl-CoA degradation (MFE-dependent, yeast)
APECO78_23045	PWY-7340	9-<i>cis</i>, 11-<i>trans</i>-octadecadienoyl-CoA degradation (isomerase-dependent, yeast)
APECO78_23045	PWY-735	jasmonic acid biosynthesis
APECO78_23050	PWY-1361	benzoyl-CoA degradation I (aerobic)
APECO78_23050	PWY-5109	2-methylbutanoate biosynthesis
APECO78_23050	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
APECO78_23050	PWY-5137	fatty acid &beta;-oxidation III (unsaturated, odd number)
APECO78_23050	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
APECO78_23050	PWY-5177	glutaryl-CoA degradation
APECO78_23050	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
APECO78_23050	PWY-6435	4-hydroxybenzoate biosynthesis V
APECO78_23050	PWY-6583	pyruvate fermentation to butanol I
APECO78_23050	PWY-6837	fatty acid beta-oxidation V (unsaturated, odd number, di-isomerase-dependent)
APECO78_23050	PWY-6863	pyruvate fermentation to hexanol
APECO78_23050	PWY-6883	pyruvate fermentation to butanol II
APECO78_23050	PWY-6944	androstenedione degradation
APECO78_23050	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
APECO78_23050	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
APECO78_23050	PWY-7007	methyl ketone biosynthesis
APECO78_23050	PWY-7046	4-coumarate degradation (anaerobic)
APECO78_23050	PWY-7094	fatty acid salvage
APECO78_23050	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
APECO78_23050	PWY-7291	oleate &beta;-oxidation (isomerase-dependent, yeast)
APECO78_23050	PWY-735	jasmonic acid biosynthesis
APECO78_23050	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
