locus	strain_id	interpro	function	go	others
aaeA|aaeA|AP_003783.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR006143|IPR022871	Para-hydroxybenzoic acid efflux pump, subunit AaeA|RND efflux pump, membrane fusion protein	GO:0016020|GO:0055085	G3DSA:2.40.50.100|MF_01544|PF00529|PTHR30367|PTHR30367:SF0|SSF111369|TIGR01730
aaeB|aaeB|AP_003782.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR006726|IPR023706	Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein|Para-hydroxybenzoic acid efflux pump, subunit AaeB	GO:0005886|GO:0006810	MF_01545|PF04632|PTHR30509|PTHR30509:SF0
aaeR|aaeR|AP_003785.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000847|IPR005119|IPR011991	LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain	GO:0003700|GO:0006355	G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PS50931|PTHR32459|PTHR32459:SF0|SSF46785|SSF53850
aaeX|aaeX|AP_003784.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR012451	Protein of unknown function DUF1656		MF_01546|PF07869
aas|aas|AP_003399.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000873|IPR002123|IPR020845|IPR023775	AMP-binding, conserved site|AMP-dependent synthetase/ligase|Bifunctional 2-acylglycerophosphoethanolamine acyltransferase/acyl synthetase Aas|Phospholipid/glycerol acyltransferase	GO:0003824|GO:0006631|GO:0008152|GO:0008654|GO:0008779|GO:0008922|GO:0016746	G3DSA:2.30.38.10|G3DSA:3.30.300.30|G3DSA:3.40.50.980|MF_01162|PF00501|PF01553|PS00455|PTHR24096|PTHR24096:SF36|SM00563|SSF56801|SSF69593
aat|aat|AP_001515.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004616|IPR016181	Acyl-CoA N-acyltransferase|Leucyl/phenylalanyl-tRNA-protein transferase	GO:0008914|GO:0030163	MF_00688|PF03588|PTHR30098|PTHR30098:SF0|SSF55729|TIGR00667
abgA|abgA|AP_001966.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002933|IPR011650|IPR017439	Amidohydrolase|Peptidase M20|Peptidase M20, dimerisation domain	GO:0008152|GO:0016787	G3DSA:3.30.70.360|G3DSA:3.40.630.10|PF01546|PF07687|PIRSF005962|PTHR32404|PTHR32404:SF0|SSF53187|SSF55031|TIGR01891
abgB|abgB|AP_001965.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002933|IPR011650|IPR017145|IPR017439	Amidohydrolase|Aminobenzoyl-glutamate utilization protein B|Peptidase M20|Peptidase M20, dimerisation domain	GO:0008152|GO:0016787	G3DSA:3.30.70.360|G3DSA:3.40.630.10|PF01546|PIRSF037227|PTHR30575|PTHR30575:SF0|SSF53187|SSF55031|TIGR01891
abgR|abgR|AP_001967.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000847|IPR005119|IPR011991	LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain	GO:0003700|GO:0006355	G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PR00039|PS50931|PTHR32389|SSF46785|SSF53850
abgT|abgT|AP_001964.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004697|IPR011540	AbgT putative transporter|AbgT putative transporter, subfamily		PF03806|PTHR30282|PTHR30282:SF0|TIGR00819
abrB|abrB|AP_001353.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR007820|IPR017516	AbrB duplication|Putative ammonia monooxygenase/protein AbrB		PF05145|PIRSF038991|TIGR03082
accA|accA|AP_000845.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001095|IPR011763	Acetyl-CoA carboxylase, alpha subunit|Acetyl-coenzyme A carboxyltransferase, C-terminal	GO:0003989|GO:0006633|GO:0009317|GO:0016874	G3DSA:3.90.226.10|MF_00823|PF03255|PR01069|PS50989|PTHR22855|PTHR22855:SF3|SSF52096|TIGR00513
accB|accB|AP_003795.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000089|IPR001249|IPR001882|IPR011053	Acetyl-CoA biotin carboxyl carrier|Biotin-binding site|Biotin/lipoyl attachment|Single hybrid motif	GO:0003989|GO:0006633|GO:0009317	G3DSA:2.40.50.100|PF00364|PR01071|PS00188|PS50968|PTHR18866|PTHR18866:SF53|SSF51230|TIGR00531
accC|accC|AP_003796.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004549|IPR005479|IPR005481|IPR005482|IPR011054|IPR011761|IPR011764|IPR013815|IPR013816|IPR016185	ATP-grasp fold|ATP-grasp fold, subdomain 1|ATP-grasp fold, subdomain 2|Acetyl-CoA carboxylase, biotin carboxylase|Biotin carboxylase, C-terminal|Biotin carboxylation domain|Carbamoyl-phosphate synthase, large subunit, N-terminal|Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain|Pre-ATP-grasp domain|Rudiment single hybrid motif	GO:0003824|GO:0004075|GO:0005524|GO:0008152|GO:0016874|GO:0046872	G3DSA:3.30.1490.20|G3DSA:3.30.470.20|G3DSA:3.40.50.20|PF00289|PF02785|PF02786|PS00866|PS00867|PS50975|PS50979|PTHR18866|SM00878|SSF51246|SSF52440|SSF56059|TIGR00514
accD|accD|AP_002916.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000022|IPR000438	Acetyl-CoA carboxylase carboxyl transferase, beta subunit|Carboxyl transferase	GO:0003989|GO:0006633|GO:0009317|GO:0016874	G3DSA:3.90.226.10|PF01039|PR01070|PTHR22855|PTHR22855:SF4|SSF52096|TIGR00515
aceA|aceA|AP_004516.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000918|IPR006254|IPR015813|IPR018523	Isocitrate lyase|Isocitrate lyase/phosphorylmutase|Isocitrate lyase/phosphorylmutase, conserved site|Pyruvate/Phosphoenolpyruvate kinase-like domain	GO:0003824|GO:0004451|GO:0008152|GO:0019752	G3DSA:3.20.20.60|PF00463|PIRSF001362|PS00161|PTHR21631|PTHR21631:SF3|SSF51621|TIGR01346
aceB|aceB|AP_004515.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001465|IPR006252|IPR011076|IPR019830	Malate synthase|Malate synthase A|Malate synthase, conserved site|Malate synthase-like	GO:0003824|GO:0004474|GO:0006097	G3DSA:1.20.1220.12|G3DSA:3.20.20.360|PF01274|PIRSF001363|PS00510|PTHR21631|PTHR21631:SF1|SSF51645|TIGR01344
aceE|aceE|AP_000775.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004660|IPR005474|IPR009014|IPR015941	2-oxo-acid dehydrogenase E1 component homodimeric type|Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II|Transketolase, N-terminal|Transketolase-like, C-terminal	GO:0003824|GO:0008152|GO:0016491|GO:0055114	G3DSA:3.40.50.920|G3DSA:3.40.50.970|PF00456|PIRSF000156|PTHR11624|PTHR11624:SF2|SSF52518|SSF52922|TIGR00759
aceF|aceF|AP_000776.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000089|IPR001078|IPR003016|IPR004167|IPR006256|IPR011053|IPR023213	2-oxo acid dehydrogenase, lipoyl-binding site|2-oxoacid dehydrogenase acyltransferase, catalytic domain|Biotin/lipoyl attachment|Chloramphenicol acetyltransferase-like domain|Dihydrolipoamide acetyltransferase pyruvate dehydrogenase complex|E3 binding|Single hybrid motif	GO:0004742|GO:0006096|GO:0008152|GO:0016746|GO:0045254	G3DSA:2.40.50.100|G3DSA:3.30.559.10|G3DSA:4.10.320.10|PF00198|PF00364|PF02817|PS00189|PS50968|PTHR23151|PTHR23151:SF22|SSF47005|SSF51230|SSF52777|TIGR01348
aceK|aceK|AP_004517.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR010452	Isocitrate dehydrogenase kinasephosphatase	GO:0005737|GO:0006006|GO:0008772|GO:0016791	MF_00747|PD043552|PF06315|PIRSF000719
ackA|ackA|AP_002896.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000890|IPR004372|IPR023865	Acetate/Proprionate kinase|Aliphatic acid kinase, short-chain|Aliphatic acid kinase, short-chain, conserved site	GO:0005622|GO:0006082|GO:0008152|GO:0016301|GO:0016310|GO:0016774	G3DSA:3.30.420.40|MF_00020|PF00871|PIRSF000722|PR00471|PS01075|PS01076|PTHR21060|PTHR21060:SF14|SSF53067|TIGR00016
acnA|acnA|AP_001902.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000573|IPR001030|IPR006249|IPR015928|IPR015931|IPR015932|IPR015934|IPR015937|IPR018136	Aconitase A/isopropylmalate dehydratase small subunit, swivel|Aconitase family, 4Fe-4S cluster binding site|Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha|Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3|Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2|Aconitase/3-isopropylmalate dehydratase, swivel|Aconitase/Iron regulatory protein 2/2-methylisocitrate dehydratase|Aconitase/iron regulatory protein 2|Aconitase/isopropylmalate dehydratase	GO:0008152|GO:0051539	G3DSA:3.20.19.10|G3DSA:3.30.499.10|G3DSA:3.40.1060.10|PF00330|PF00694|PR00415|PS00450|PS01244|PTHR11670|PTHR11670:SF1|SSF52016|SSF53732|TIGR01341
acnB|acnB|AP_000779.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001030|IPR004406|IPR015928|IPR015929|IPR015930|IPR015931|IPR015932|IPR015933|IPR015937|IPR018136	Aconitase B, HEAT-like, bacterial|Aconitase B, N-terminal, bacterial|Aconitase B, bacterial|Aconitase B, iron-sulphur-binding, bacterial|Aconitase family, 4Fe-4S cluster binding site|Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha|Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3|Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2|Aconitase/3-isopropylmalate dehydratase, swivel|Aconitase/isopropylmalate dehydratase	GO:0003994|GO:0005829|GO:0006099|GO:0008152|GO:0051539	G3DSA:3.20.19.10|G3DSA:3.30.499.10|G3DSA:3.40.1060.10|PF00330|PF06434|PF11791|PIRSF036687|PS00450|PS01244|PTHR11670|PTHR11670:SF3|SSF52016|SSF53732|SSF74778|TIGR00117
acpP|acpP|AP_001720.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003231|IPR006162|IPR009081	Acyl carrier protein (ACP)|Acyl carrier protein-like|Phosphopantetheine attachment site	GO:0006633	G3DSA:1.10.1200.10|MF_01217|PD000887|PF00550|PS00012|PS50075|PTHR20863|PTHR20863:SF17|SSF47336|TIGR00517
acpS|acpS|AP_003149.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002582|IPR004568|IPR008278	4'-phosphopantetheinyl transferase superfamily|Holo-[acyl carrier protein] synthase|Phosphopantethiene-protein transferase domain	GO:0000287|GO:0006633|GO:0008897|GO:0009059	G3DSA:3.90.470.20|MF_00101|PD004282|PF01648|SSF56214|TIGR00516|TIGR00556
acpT|acpT|AP_004317.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR008278	4'-phosphopantetheinyl transferase superfamily	GO:0000287|GO:0008897|GO:0009059	G3DSA:3.90.470.20|PF01648|PTHR12215|PTHR12215:SF2|SSF56214
acrA|acrA|AP_001112.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR006143	RND efflux pump, membrane fusion protein	GO:0016020|GO:0055085	G3DSA:2.40.50.100|PF00529|PS51257|PTHR30158|PTHR30158:SF0|SSF111369|TIGR01730
acrB|acrB|AP_001111.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001036|IPR004764|IPR027463	Acriflavin resistance protein|Hydrophobe/amphiphile efflux-1 HAE1|Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains	GO:0005215|GO:0006810|GO:0016020|GO:0016021	G3DSA:1.10.3850.10|G3DSA:3.30.2090.10|G3DSA:3.30.70.1430|PF00873|PR00702|PTHR32063|PTHR32063:SF0|SSF82693|SSF82714|SSF82866|TIGR00915
acrD|acrD|AP_003055.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001036|IPR004764|IPR027463	Acriflavin resistance protein|Hydrophobe/amphiphile efflux-1 HAE1|Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains	GO:0005215|GO:0006810|GO:0016020|GO:0016021	G3DSA:1.10.3850.10|G3DSA:1.20.1640.10|G3DSA:3.30.2090.10|G3DSA:3.30.70.1430|PF00873|PR00702|PTHR32063|PTHR32063:SF0|SSF82693|SSF82714|SSF82866|TIGR00915
acrE|acrE|AP_003805.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR006143	RND efflux pump, membrane fusion protein	GO:0016020|GO:0055085	G3DSA:2.40.50.100|PF00529|PTHR30158|PTHR30158:SF0|SSF111369|TIGR01730
acrF|acrF|AP_003806.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001036|IPR004764|IPR027463	Acriflavin resistance protein|Hydrophobe/amphiphile efflux-1 HAE1|Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains	GO:0005215|GO:0006810|GO:0016020|GO:0016021	G3DSA:1.10.3850.10|G3DSA:3.30.2090.10|G3DSA:3.30.70.1430|PF00873|PR00702|PTHR32063|PTHR32063:SF0|SSF82693|SSF82714|SSF82866|TIGR00915
acrR|acrR|AP_001113.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001647|IPR009057|IPR011075|IPR013572|IPR015893|IPR023772	DNA-binding HTH domain, TetR-type|DNA-binding HTH domain, TetR-type, conserved site|Homeodomain-like|Tetracycline transcriptional regulator, TetR-like, C-terminal|Tetracycline transcriptional regulator, TetR-related, C-terminal|Transcription regulator MAATS, C-terminal	GO:0003677	G3DSA:1.10.10.60|G3DSA:1.10.357.10|PF00440|PF08361|PR00455|PS01081|PS50977|SSF46689|SSF48498
acs|acs|AP_004570.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000873|IPR011904|IPR020845|IPR024597|IPR025110	AMP-binding, conserved site|AMP-dependent synthetase/ligase|Acetate-CoA ligase|Acyl-CoA synthase, domain of unknown function DUF3448|Domain of unknown function DUF4009	GO:0003824|GO:0003987|GO:0008152|GO:0016208|GO:0019427	G3DSA:2.30.38.10|G3DSA:3.30.300.30|G3DSA:3.40.50.980|MF_01123|PF00501|PF11930|PF13193|PS00455|PTHR24095|PTHR24095:SF25|SSF56801|TIGR02188
actP|actP|AP_004568.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001734|IPR014083|IPR019900	Cation/acetate symporter ActP|Sodium/solute symporter|Sodium/solute symporter, subgroup	GO:0005215|GO:0005887|GO:0006810|GO:0015123|GO:0016020|GO:0043879|GO:0055085	PF00474|PTHR11819|PTHR11819:SF13|TIGR00813|TIGR02711
ada|ada|AP_002809.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001497|IPR004026|IPR008332|IPR009057|IPR011991|IPR014048|IPR016221|IPR018060|IPR018062	Ada DNA repair, metal-binding|Bifunctional regulatory protein Ada|DNA binding HTH domain, AraC-type|HTH domain AraC-type, conserved site|Homeodomain-like|Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding|Methylated-DNA-[protein]-cysteine S-methyltransferase, active site|Methylguanine DNA methyltransferase, ribonuclease-like|Winged helix-turn-helix DNA-binding domain	GO:0003677|GO:0003700|GO:0003824|GO:0003908|GO:0005622|GO:0006281|GO:0006355|GO:0008168|GO:0008270|GO:0043565	G3DSA:1.10.10.10|G3DSA:1.10.10.60|G3DSA:3.30.160.70|G3DSA:3.40.10.10|PF00165|PF01035|PF02805|PF02870|PIRSF000409|PS00041|PS00374|PS01124|PTHR10815|PTHR10815:SF0|SM00342|SSF46689|SSF46767|SSF53155|SSF57884|TIGR00589
add|add|AP_002244.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001365|IPR006330|IPR006650	Adenosine/AMP deaminase active site|Adenosine/AMP deaminase domain|Adenosine/adenine deaminase	GO:0009168|GO:0019239	G3DSA:3.20.20.140|MF_00540|PF00962|PS00485|PTHR11409|PTHR11409:SF35|SSF51556|TIGR01430
ade|ade|AP_004127.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR006679|IPR006680|IPR011059|IPR026912	Adenine deaminase|Adenine deaminase C-terminal domain|Amidohydrolase 1|Metal-dependent hydrolase, composite domain	GO:0000034|GO:0006146|GO:0016787|GO:0016810	G3DSA:2.30.40.10|G3DSA:3.20.20.140|MF_01518|PF01979|PF13382|PF13594|PTHR11113|SSF51338|SSF51556|TIGR01178
adhE|adhE|AP_001865.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001670|IPR012079|IPR015590|IPR016161|IPR016162|IPR016163|IPR018211	Alcohol dehydrogenase, iron-type|Alcohol dehydrogenase, iron-type, conserved site|Aldehyde dehydrogenase domain|Aldehyde dehydrogenase, C-terminal|Aldehyde dehydrogenase, N-terminal|Aldehyde/histidinol dehydrogenase|Bifunctional aldehyde/alcohol dehydrogenase	GO:0004022|GO:0006066|GO:0008152|GO:0008774|GO:0015976|GO:0016491|GO:0016620|GO:0046872|GO:0055114	G3DSA:1.20.1090.10|G3DSA:3.40.309.10|G3DSA:3.40.50.1970|G3DSA:3.40.605.10|PF00171|PF00465|PIRSF000111|PS00060|PS00913|PTHR11496|PTHR11496:SF46|SSF53720|SSF56796
adhP|adhP|AP_002101.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002085|IPR002328|IPR011032|IPR013149|IPR013154|IPR016040	Alcohol dehydrogenase GroES-like|Alcohol dehydrogenase superfamily, zinc-type|Alcohol dehydrogenase, C-terminal|Alcohol dehydrogenase, zinc-type, conserved site|GroES-like|NAD(P)-binding domain	GO:0008270|GO:0016491|GO:0055114	G3DSA:3.40.50.720|G3DSA:3.90.180.10|PF00107|PF08240|PS00059|PTHR11695|PTHR11695:SF280|SSF50129|SSF51735
adiA|adiA|AP_004618.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000310|IPR005308|IPR008286|IPR011193|IPR015421|IPR015422|IPR015424	Orn/Lys/Arg decarboxylase, C-terminal|Orn/Lys/Arg decarboxylase, N-terminal|Orn/Lys/Arg decarboxylase, major domain|Ornithine/lysine/arginine decarboxylase|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2	GO:0003824|GO:0005737|GO:0006520|GO:0016831|GO:0030170	G3DSA:3.40.640.10|G3DSA:3.90.100.10|G3DSA:3.90.1150.10|PF01276|PF03709|PF03711|PIRSF009393|PS00703|PTHR30475|PTHR30475:SF0|SSF53383|SSF55904
adiC|adiC|AP_004616.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002293	Amino acid/polyamine transporter I	GO:0003333|GO:0015171|GO:0016020	PF13520|PIRSF006060|PTHR11785|PTHR11785:SF127
adiY|adiY|AP_004617.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR009057|IPR018060|IPR018062|IPR020449	DNA binding HTH domain, AraC-type|HTH domain AraC-type, conserved site|Homeodomain-like|Transcription regulator HTH, AraC- type	GO:0003677|GO:0003700|GO:0005622|GO:0006355|GO:0043565	G3DSA:1.10.10.60|PF12833|PR00032|PS00041|PS01124|PTHR11019|SM00342|SSF46689
adk|adk|AP_001123.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000850|IPR006259|IPR007862|IPR027417	Adenylate kinase|Adenylate kinase subfamily|Adenylate kinase, active site lid domain|P-loop containing nucleoside triphosphate hydrolase	GO:0004017|GO:0005524|GO:0006139|GO:0016776|GO:0019201|GO:0019205|GO:0046939	G3DSA:3.40.50.300|MF_00235|PF00406|PF05191|PR00094|PS00113|PTHR23359|SSF52540|TIGR01351
aegA|aegA|AP_003053.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001450|IPR006006|IPR012285|IPR016040|IPR017896|IPR017900|IPR023753	4Fe-4S binding domain|4Fe-4S ferredoxin, iron-sulphur binding, conserved site|4Fe-4S ferredoxin-type, iron-sulpur binding domain|Fumarate reductase, C-terminal|Glutamate synthase, NADH/NADPH, small subunit 2|NAD(P)-binding domain|Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain	GO:0006537|GO:0009055|GO:0016491|GO:0016639|GO:0051536|GO:0055114	G3DSA:1.10.1060.10|G3DSA:3.30.70.20|G3DSA:3.40.50.720|G3DSA:3.50.50.60|PF00037|PF07992|PR00419|PS00198|PS51379|PTHR11938|PTHR11938:SF9|SSF51971|SSF54862|TIGR01318
aer|aer|AP_003621.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000014|IPR001610|IPR003660|IPR004089|IPR004090|IPR013655	Chemotaxis methyl-accepting receptor|HAMP linker domain|Methyl-accepting chemotaxis protein (MCP) signalling domain|PAC motif|PAS domain|PAS fold-3	GO:0004871|GO:0005515|GO:0006935|GO:0007165|GO:0016020|GO:0016021	G3DSA:1.10.287.950|G3DSA:3.30.450.20|PF00015|PF00672|PF08447|PR00260|PS50111|PTHR32089|PTHR32089:SF22|SM00086|SM00091|SM00283|SSF55785|SSF58104|TIGR00229
aes|aes|AP_001125.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002168|IPR013094|IPR023508	Acetyl esterase, 'GDXG' lipolytic|Alpha/beta hydrolase fold-3|Lipase, GDXG, active site	GO:0004091|GO:0005737|GO:0008152|GO:0016787|GO:0042803	G3DSA:3.40.50.1820|MF_01958|PF07859|PS01173|PS01174|PTHR23024|PTHR23024:SF47|SSF53474
afuB|afuB|AP_000916.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000515	Binding-protein-dependent transport systems inner membrane component	GO:0005215|GO:0006810|GO:0016020	G3DSA:1.10.3720.10|PF00528|PS50928|SSF161098
afuC|afuC|AP_000915.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003439|IPR003593|IPR008995|IPR013611|IPR015853|IPR017871|IPR027417	AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter, ferric cation import, FbpC|ABC transporter-like|Molybdate/tungstate binding, C-terminal|P-loop containing nucleoside triphosphate hydrolase|Transport-associated OB, type 2	GO:0000166|GO:0005215|GO:0005524|GO:0006810|GO:0015408|GO:0015682|GO:0016020|GO:0016820|GO:0016887|GO:0017111|GO:0043190	G3DSA:3.40.50.300|PF00005|PF08402|PS00211|PS50893|PS51242|PTHR24220|PTHR24220:SF158|SM00382|SSF50331|SSF52540
agaA|agaA|AP_003680.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR006680	Amidohydrolase 1	GO:0016787	G3DSA:2.30.40.10|G3DSA:3.20.20.140|PF01979|PTHR11113|SSF51556
agaB|agaB|AP_003683.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004720|IPR018455	Phosphotransferase system, sorbose subfamily IIB component|Phosphotransferase system, sorbose subfamily IIB component, subgroup	GO:0005737|GO:0008982|GO:0009401	G3DSA:3.40.35.10|PF03830|PS51101|SSF52728|TIGR00854
agaC|agaC|AP_003684.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004700|IPR018404	Phosphotransferase system, sorbose-specific IIC subunit|Phosphotransferase system, sorbose-specific IIC subunit, subgroup	GO:0009401|GO:0016021	PF03609|PS51106|PTHR32502|PTHR32502:SF0|TIGR00822
agaD|agaD|AP_003685.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004704|IPR018405	Phosphotransferase system, mannose/fructose/sorbose family IID component|Phosphotransferase system, mannose/fructose/sorbose family IID component, subgroup	GO:0009401|GO:0016021	PF03613|PS51108|PTHR32502|PTHR32502:SF0|TIGR00828
agaI|agaI|AP_003686.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004547|IPR006148|IPR018321	Glucosamine-6-phosphate isomerase|Glucosamine-6-phosphate isomerase, conserved site|Glucosamine/galactosamine-6-phosphate isomerase	GO:0004342|GO:0005975|GO:0006044	G3DSA:3.40.50.1360|PF01182|PS01161|PTHR11280|PTHR11280:SF0|SSF100950
agaR|agaR|AP_003677.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001034|IPR011991|IPR014036|IPR018356	DeoR C-terminal sensor domain|HTH DeoR N-terminal domain|Transcription regulator, HTH DeoR-type, conserved site|Winged helix-turn-helix DNA-binding domain	GO:0003700|GO:0005622|GO:0006355	G3DSA:1.10.10.10|G3DSA:3.40.50.1360|PF00455|PF08220|PS00894|PS51000|PTHR30363|PTHR30363:SF0|SM00420|SSF100950|SSF46785
agaS|agaS|AP_003681.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001347|IPR014180	Sugar isomerase (SIS)|Sugar isomerase, AgaS	GO:0005975|GO:0016861|GO:0030246	G3DSA:3.40.50.10490|PF01380|PS51464|PTHR32502|PTHR32502:SF1|SSF53697|TIGR02815
agaV|agaV|AP_003679.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004720|IPR018455	Phosphotransferase system, sorbose subfamily IIB component|Phosphotransferase system, sorbose subfamily IIB component, subgroup	GO:0005737|GO:0008982|GO:0009401	G3DSA:3.40.35.10|PF03830|PS51101|SSF52728|TIGR00854
agp|agp|AP_001633.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000560	Histidine phosphatase superfamily, clade-2	GO:0003993	G3DSA:3.40.50.1240|PF00328|PS00616|PS00778|SSF53254
ahpC|ahpC|AP_001253.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000866|IPR012336|IPR017559|IPR019479|IPR024706	Alkyl hydroperoxide reductase subunit C|Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant|Peroxiredoxin, AhpC-type|Peroxiredoxin, C-terminal|Thioredoxin-like fold	GO:0006979|GO:0016209|GO:0016491|GO:0051920|GO:0055114	G3DSA:3.40.30.10|PF00578|PF10417|PIRSF000239|PS51352|PTHR10681|PTHR10681:SF7|SSF52833|TIGR03137
ahpF|ahpF|AP_001254.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000103|IPR001327|IPR002109|IPR008255|IPR012081|IPR012336|IPR013027|IPR023753	Alkyl hydroperoxide reductase subunit F|FAD-dependent pyridine nucleotide-disulphide oxidoreductase|Glutaredoxin|Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain|Pyridine nucleotide-disulphide oxidoreductase, NAD-binding domain|Pyridine nucleotide-disulphide oxidoreductase, class-II|Pyridine nucleotide-disulphide oxidoreductase, class-II, active site|Thioredoxin-like fold	GO:0000302|GO:0008785|GO:0009055|GO:0015035|GO:0016491|GO:0016651|GO:0045454|GO:0050660|GO:0051287|GO:0055114	G3DSA:3.40.30.10|G3DSA:3.50.50.60|PF00070|PF07992|PF13192|PIRSF000238|PR00368|PR00469|PS00573|PS51354|PTHR22912|PTHR22912:SF57|SSF51905|SSF52833|TIGR03140
aidB|aidB|AP_004687.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR006089|IPR006090|IPR006091|IPR009075|IPR009100	Acyl-CoA dehydrogenase, conserved site|Acyl-CoA dehydrogenase/oxidase|Acyl-CoA dehydrogenase/oxidase C-terminal|Acyl-CoA oxidase/dehydrogenase, central domain|Acyl-CoA oxidase/dehydrogenase, type 1	GO:0003995|GO:0008152|GO:0016627|GO:0055114	G3DSA:1.20.140.10|G3DSA:2.40.110.10|PF00441|PF02770|PS00072|PS00073|PTHR10909|PTHR10909:SF158|SSF47203|SSF56645
ais|ais|AP_002849.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR011310|IPR013078	Histidine phosphatase superfamily, clade-1|Lipopolysaccharide core heptose(II)-phosphate phosphatase	GO:0016791	G3DSA:3.40.50.1240|MF_01868|PF00300|PIRSF011416|SSF53254
alaS|alaS|AP_003264.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002318|IPR003156|IPR009000|IPR012947|IPR018162|IPR018163|IPR018164|IPR018165|IPR023033	Alanine-tRNA ligase, class IIc|Alanine-tRNA ligase, class IIc, anti-codon-binding domain|Alanine-tRNA ligase, eukaryota/bacteria|Alanyl-tRNA synthetase, class IIc, N-terminal|Alanyl-tRNA synthetase, class IIc, core domain|Phosphoesterase, DHHA1|Threonyl/alanyl tRNA synthetase, SAD|Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain|Translation elongation/initiation factor/Ribosomal, beta-barrel	GO:0000166|GO:0003676|GO:0004813|GO:0005524|GO:0005737|GO:0006419|GO:0016876|GO:0043039	G3DSA:3.30.930.10|MF_00036_B|PF01411|PF02272|PF07973|PR00980|PS50860|PTHR11777|PTHR11777:SF6|SM00863|SSF101353|SSF50447|SSF55186|SSF55681|TIGR00344
aldA|aldA|AP_002040.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR015590|IPR016160|IPR016161|IPR016162|IPR016163	Aldehyde dehydrogenase domain|Aldehyde dehydrogenase, C-terminal|Aldehyde dehydrogenase, N-terminal|Aldehyde dehydrogenase, conserved site|Aldehyde/histidinol dehydrogenase	GO:0008152|GO:0016491|GO:0016620|GO:0055114	G3DSA:3.40.309.10|G3DSA:3.40.605.10|PF00171|PS00070|PS00687|PTHR11699|PTHR11699:SF37|SSF53720
aldB|aldB|AP_004204.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR015590|IPR016160|IPR016161|IPR016162|IPR016163	Aldehyde dehydrogenase domain|Aldehyde dehydrogenase, C-terminal|Aldehyde dehydrogenase, N-terminal|Aldehyde dehydrogenase, conserved site|Aldehyde/histidinol dehydrogenase	GO:0008152|GO:0016491|GO:0016620|GO:0055114	G3DSA:3.40.309.10|G3DSA:3.40.605.10|PF00171|PS00070|PS00687|PTHR11699|PTHR11699:SF46|SSF53720
alkA|alkA|AP_002668.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000035|IPR003265|IPR010316|IPR011257|IPR023170	Alkylbase DNA glycosidase, conserved site|DNA glycosylase|DNA-3-methyladenine glycosylase AlkA, N-terminal|Helix-turn-helix, base-excision DNA repair, C-terminal|HhH-GPD domain	GO:0003824|GO:0003905|GO:0006281|GO:0006284	G3DSA:1.10.1670.10|G3DSA:1.10.340.30|G3DSA:3.30.310.20|PF00730|PF06029|PS00516|PTHR10242|PTHR10242:SF0|SM00478|SM01009|SSF48150|SSF55945
alkB|alkB|AP_002808.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004574|IPR005123|IPR027450	Alkylated DNA repair protein AlkB|Alpha-ketoglutarate-dependent dioxygenase AlkB-like|Oxoglutarate/iron-dependent dioxygenase	GO:0006281|GO:0016491|GO:0016706|GO:0055114	G3DSA:2.60.120.590|PF13532|PS51471|PTHR16557|PTHR16557:SF0|SSF51197|TIGR00568
allA|allA|AP_001153.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR007247|IPR011051|IPR023525|IPR024060	RmlC-like cupin domain|Ureidoglycolate hydrolase|Ureidoglycolate hydrolase domain|Ureidoglycolate hydrolase, bacterial	GO:0000256|GO:0004848	G3DSA:2.60.120.480|MF_00616|PF04115|PIRSF017306|PTHR21221|PTHR21221:SF0|SSF51182
allB|allB|AP_001160.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR011059|IPR017593	Allantoinase|Metal-dependent hydrolase, composite domain	GO:0000256|GO:0004038|GO:0008270|GO:0016810|GO:0050897	G3DSA:2.30.40.10|G3DSA:3.20.20.140|MF_01645|PF13147|PTHR11647|PTHR11647:SF38|SSF51338|SSF51556|TIGR03178
allC|allC|AP_001164.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002933|IPR010158|IPR011650|IPR017591	Allantoate amidohydrolase|Amidase, hydantoinase/carbamoylase|Peptidase M20|Peptidase M20, dimerisation domain	GO:0000256|GO:0008152|GO:0009442|GO:0016787|GO:0016813|GO:0030145|GO:0042803|GO:0047652	G3DSA:3.30.70.360|G3DSA:3.40.630.10|PF01546|PIRSF001235|PTHR32494|PTHR32494:SF3|SSF53187|SSF55031|TIGR01879|TIGR03176
allD|allD|AP_001165.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003767|IPR017590	Malate/L-lactate dehydrogenase|Ureidoglycolate dehydrogenase	GO:0008152|GO:0016491|GO:0055114	G3DSA:1.10.1530.10|G3DSA:3.30.1370.60|PF02615|PTHR11091|PTHR11091:SF0|SSF89733|TIGR03175
allR|allR|AP_001154.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR005471|IPR011991|IPR014757	Transcription regulator IclR, C-terminal|Transcription regulator IclR, N-terminal|Winged helix-turn-helix DNA-binding domain	GO:0003677|GO:0006355	G3DSA:1.10.10.10|G3DSA:3.30.450.40|PF01614|PF09339|PS51077|PS51078|PTHR30136|PTHR30136:SF0|SM00346|SSF46785|SSF55781
alpA|alpA|AP_003203.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR010260	Bacteriophage P4, Orf88		PF05930
alr|alr|AP_004554.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000821|IPR001608|IPR009006|IPR011079|IPR020622	Alanine racemase|Alanine racemase, C-terminal|Alanine racemase, N-terminal|Alanine racemase, pyridoxal-phosphate attachment site|Alanine racemase/group IV decarboxylase, C-terminal	GO:0003824|GO:0006522|GO:0008784	G3DSA:2.40.37.10|G3DSA:3.20.20.10|MF_01201|PF00842|PF01168|PR00992|PS00395|PTHR30511|SM01005|SSF50621|SSF51419|TIGR00492
alsA|alsA|AP_004589.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003439|IPR003593|IPR017871|IPR027417	AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase	GO:0000166|GO:0005524|GO:0016887|GO:0017111	G3DSA:3.40.50.300|PF00005|PS00211|PS50893|PTHR24220|PTHR24220:SF84|SM00382|SSF52540
alsB|alsB|AP_004590.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR025997	Periplasmic binding protein domain		G3DSA:3.40.50.2300|PF13407|PTHR32196|PTHR32196:SF9|SSF53822
alsC|alsC|AP_004588.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001851	ABC transporter, permease	GO:0005215|GO:0006810|GO:0016020	PF02653|PTHR32196|PTHR32196:SF0
alsE|alsE|AP_004587.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000056|IPR011060|IPR013785	Aldolase-type TIM barrel|Ribulose-phosphate 3-epimerase-like|Ribulose-phosphate binding barrel	GO:0003824|GO:0005975|GO:0008152|GO:0016857	G3DSA:3.20.20.70|PF00834|PS01085|PS01086|PTHR11749|SSF51366
alsK|alsK|AP_004586.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000600	ROK		G3DSA:3.30.420.40|PF00480|PS01125|PTHR18964|PTHR18964:SF80|SSF53067
alx|alx|AP_003637.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR005496|IPR022369	Integral membrane protein TerC|Integral membrane protein TerC, riboswitch-linked	GO:0016021	PF03741|PTHR30238|PTHR30238:SF0|TIGR03718
amiA|amiA|AP_003029.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002508|IPR006311	Cell wall hydrolase/autolysin, catalytic|Twin-arginine translocation pathway, signal sequence	GO:0008745|GO:0009253	G3DSA:3.40.630.40|PF01520|PS51318|PTHR30404|PTHR30404:SF0|SM00646|SSF53187
amiB|amiB|AP_004669.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002508	Cell wall hydrolase/autolysin, catalytic	GO:0008745|GO:0009253	G3DSA:3.40.630.40|PF01520|PTHR30404|PTHR30404:SF0|SM00646|SSF53187
amiC|amiC|AP_003380.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002508|IPR006311|IPR021731	AMIN domain|Cell wall hydrolase/autolysin, catalytic|Twin-arginine translocation pathway, signal sequence	GO:0008745|GO:0009253	G3DSA:3.40.630.40|PF01520|PF11741|PS51318|PTHR30404|PTHR30404:SF0|SM00646|SSF53187
amn|amn|AP_002586.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000845|IPR011271|IPR018017|IPR018953	AMP nucleosidase|AMP nucleoside phosphorylase, N-terminal|Nucleoside phosphorylase|Nucleoside phosphorylase domain	GO:0003824|GO:0008714|GO:0009116|GO:0044209	G3DSA:3.30.1730.10|G3DSA:3.40.50.1580|PF01048|PF10423|PTHR21234|PTHR21234:SF11|SSF53167|TIGR01717
ampC|ampC|AP_004653.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001466|IPR012338	Beta-lactamase-related|Beta-lactamase/transpeptidase-like		G3DSA:3.40.710.10|PF00144|PTHR22935|PTHR22935:SF9|SSF56601
ampD|ampD|AP_000771.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002502	N-acetylmuramoyl-L-alanine amidase domain	GO:0008745|GO:0009253	G3DSA:3.40.80.10|PF01510|PTHR30039|SM00644|SSF55846
ampE|ampE|AP_000772.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091				
ampG|ampG|AP_001083.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004752|IPR011701|IPR016196|IPR020846	AmpG-like permease/Acetyl-coenzyme A transporter 1|Major facilitator superfamily|Major facilitator superfamily domain|Major facilitator superfamily domain, general substrate transporter	GO:0016020|GO:0016021|GO:0055085	G3DSA:1.20.1250.20|PF07690|PS50850|PTHR12778|PTHR12778:SF2|SSF103473|TIGR00901
ampH|ampH|AP_001027.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001466|IPR012338	Beta-lactamase-related|Beta-lactamase/transpeptidase-like		G3DSA:3.40.710.10|PF00144|PTHR22935|PTHR22935:SF26|SSF56601
amtB|amtB|AP_001101.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001905|IPR018047|IPR024041	Ammonium transporter|Ammonium transporter AmtB-like domain|Ammonium transporter, conserved site	GO:0008519|GO:0015696|GO:0016020|GO:0072488	G3DSA:1.10.3430.10|PF00909|PS01219|PTHR11730|PTHR11730:SF3|SSF111352|TIGR00836
amyA|amyA|AP_002542.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR006047|IPR006589|IPR013776|IPR013780|IPR013781|IPR015902|IPR017853	Alpha-amylase, thermostable|Glycoside hydrolase, catalytic domain|Glycoside hydrolase, family 13|Glycoside hydrolase, superfamily|Glycosyl hydrolase, family 13, all-beta|Glycosyl hydrolase, family 13, catalytic domain|Glycosyl hydrolase, family 13, subfamily, catalytic domain	GO:0003824|GO:0004553|GO:0005509|GO:0005975|GO:0043169	G3DSA:2.60.40.1180|G3DSA:3.20.20.80|PF00128|PIRSF001021|PTHR10357|PTHR10357:SF9|SM00642|SSF51011|SSF51445
ansA|ansA|AP_002386.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR006033|IPR006034|IPR020827|IPR027473|IPR027474|IPR027475	Asparaginase/glutaminase|Asparaginase/glutaminase, active site 1|Asparaginase/glutaminase, active site 2|L-asparaginase, C-terminal domain|L-asparaginase, N-terminal|L-asparaginase, type I	GO:0004067|GO:0006520	G3DSA:3.40.50.1170|G3DSA:3.40.50.40|PF00710|PIRSF001220|PR00139|PS00144|PS00917|PTHR11707|PTHR11707:SF3|SM00870|SSF53774|TIGR00519
ansB|ansB|AP_003514.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004550|IPR006034|IPR020827|IPR027473|IPR027474|IPR027475	Asparaginase/glutaminase|Asparaginase/glutaminase, active site 1|Asparaginase/glutaminase, active site 2|L-asparaginase, C-terminal domain|L-asparaginase, N-terminal|L-asparaginase, type II	GO:0004067|GO:0006520|GO:0006528	G3DSA:3.40.50.1170|G3DSA:3.40.50.40|PF00710|PIRSF001220|PR00139|PS00144|PS00917|PTHR11707|PTHR11707:SF4|SM00870|SSF53774|TIGR00520
ansP|ansP|AP_002076.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002293|IPR004840|IPR004841	Amino acid permease domain|Amino acid permease, conserved site|Amino acid/polyamine transporter I	GO:0003333|GO:0006810|GO:0006865|GO:0015171|GO:0016020|GO:0016021|GO:0055085	PF00324|PIRSF006060|PS00218|PTHR11785|PTHR11785:SF25
apaG|apaG|AP_000714.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR007474|IPR023065	ApaG domain|Uncharacterised protein family ApaG		G3DSA:2.60.40.1470|MF_00791|PF04379|PS51087|PTHR14289|PTHR14289:SF14|SSF110069
apaH|apaH|AP_000713.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004617|IPR004843	Bis(5'-nucleosyl)-tetraphosphatase (symmetrical)|Metallophosphoesterase domain	GO:0008803|GO:0016787	G3DSA:3.60.21.10|PF00149|PIRSF000903|PTHR11668|PTHR11668:SF146|SSF56300|TIGR00668
aphA|aphA|AP_004556.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR005519|IPR010025|IPR023214	Acid phosphatase (Class B)|HAD-like domain|HAD-superfamily phosphatase, subfamily IIIB, AphA	GO:0003993|GO:0030288	G3DSA:3.40.50.1000|PF03767|PIRSF017818|SSF56784|TIGR01672
appA|appA|AP_001609.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000560	Histidine phosphatase superfamily, clade-2	GO:0003993	G3DSA:3.40.50.1240|PF00328|PS00616|PS00778|SSF53254
appB|appB|AP_001608.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003317	Cytochrome d ubiquinol oxidase, subunit II	GO:0016020|GO:0055114	PF02322|PIRSF000267|PTHR30365|PTHR30365:SF1|TIGR00203
appC|appC|AP_001607.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002585	Cytochrome d ubiquinol oxidase, subunit I	GO:0016020	PF01654|PIRSF006446|PTHR30365|PTHR30365:SF0
appY|appY|AP_001209.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR009057|IPR018060|IPR018062|IPR020449	DNA binding HTH domain, AraC-type|HTH domain AraC-type, conserved site|Homeodomain-like|Transcription regulator HTH, AraC- type	GO:0003677|GO:0003700|GO:0005622|GO:0006355|GO:0043565	G3DSA:1.10.10.60|PF12833|PR00032|PS00041|PS01124|PTHR11019|PTHR11019:SF11|SM00342|SSF46689
apt|apt|AP_001118.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000836|IPR005764	Adenine phosphoribosyl transferase|Phosphoribosyltransferase domain	GO:0003999|GO:0005737|GO:0006168|GO:0009116	G3DSA:3.40.50.2020|MF_00004|PF00156|PTHR11776|PTHR11776:SF0|SSF53271|TIGR01090
aqpZ|aqpZ|AP_001506.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000425|IPR022357|IPR023271|IPR023743	Aquaporin Z|Aquaporin-like|Major intrinsic protein|Major intrinsic protein, conserved site	GO:0005215|GO:0006810|GO:0006833|GO:0015250|GO:0016020|GO:0016021|GO:0055085	G3DSA:1.20.1080.10|MF_01146|PF00230|PR00783|PS00221|PS51257|PTHR19139|PTHR19139:SF21|SSF81338|TIGR00861
araA|araA|AP_000726.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003762|IPR004216|IPR009015|IPR024664	L-arabinose isomerase|L-arabinose isomerase, C-terminal|L-fucose isomerase, N-terminal/central domain|L-fucose/L-arabinose isomerase, C-terminal	GO:0005737|GO:0005996|GO:0006004|GO:0008152|GO:0008733|GO:0008736|GO:0016861	MF_00519|PD018364|PF02610|PF11762|PIRSF001478|PTHR30148|PTHR30148:SF0|SSF50443|SSF53743
araB|araB|AP_000727.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR005929|IPR018485	Carbohydrate kinase, FGGY, C-terminal|L-ribulokinase	GO:0005975|GO:0008741|GO:0016773|GO:0019572	G3DSA:3.30.420.40|MF_00520|PF02782|PTHR10196|PTHR10196:SF8|SSF53067|TIGR01234
araC|araC|AP_000728.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003313|IPR009057|IPR018060|IPR018062|IPR020449	DNA binding HTH domain, AraC-type|HTH domain AraC-type, conserved site|Homeodomain-like|Transcription regulator HTH, AraC, arabinose-binding/dimerisation|Transcription regulator HTH, AraC- type	GO:0003677|GO:0003700|GO:0005622|GO:0006355|GO:0043565	G3DSA:1.10.10.60|G3DSA:2.60.120.280|PF02311|PF12833|PR00032|PS00041|PS01124|PTHR11019|SM00342|SSF46689|SSF51215
araD|araD|AP_000725.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001303|IPR004661	Class II aldolase/adducin N-terminal|L-ribulose-5-phosphate 4-epimerase	GO:0008270|GO:0008742|GO:0019572|GO:0046872	G3DSA:3.40.225.10|PF00596|PTHR22789|SM01007|SSF53639|TIGR00760
araE|araE|AP_003404.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003663|IPR005828|IPR005829|IPR016196|IPR020846	General substrate transporter|Major facilitator superfamily domain|Major facilitator superfamily domain, general substrate transporter|Sugar transporter, conserved site|Sugar/inositol transporter	GO:0005215|GO:0006810|GO:0016020|GO:0016021|GO:0022857|GO:0022891|GO:0055085	G3DSA:1.20.1250.20|PF00083|PR00171|PS00216|PS00217|PS50850|PTHR24063|PTHR24063:SF151|SSF103473|TIGR00879
araF|araF|AP_002519.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001761|IPR026266	L-arabinose-binding periplasmic protein|Periplasmic binding protein/LacI sugar binding domain	GO:0042882	G3DSA:3.40.50.2300|PF00532|PIRSF002816|SSF53822
araG|araG|AP_002518.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003439|IPR003593|IPR017871|IPR017917|IPR027417	AAA+ ATPase domain|ABC transporter, arabinose import, ATP-binding protein, AraG|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase	GO:0000166|GO:0005524|GO:0015612|GO:0016020|GO:0016887|GO:0017111|GO:0042882	G3DSA:3.40.50.300|PF00005|PS00211|PS50893|PS51268|PTHR24220|PTHR24220:SF84|SM00382|SSF52540
araH|araH|AP_002517.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001851	ABC transporter, permease	GO:0005215|GO:0006810|GO:0016020	PF02653|PTHR32196|PTHR32196:SF0
araJ|araJ|AP_001046.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000576|IPR011701|IPR016196|IPR020846	LacY/RafB permease family|Major facilitator superfamily|Major facilitator superfamily domain|Major facilitator superfamily domain, general substrate transporter	GO:0006810|GO:0016020|GO:0016021|GO:0055085	G3DSA:1.20.1250.20|PF07690|PS50850|PTHR24003|PTHR24003:SF271|SSF103473
arcA|arcA|AP_004889.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001789|IPR001867|IPR011006|IPR011991|IPR016032	CheY-like superfamily|Signal transduction response regulator, C-terminal|Signal transduction response regulator, C-terminal effector|Signal transduction response regulator, receiver domain|Winged helix-turn-helix DNA-binding domain	GO:0000156|GO:0000160|GO:0003677|GO:0006355	G3DSA:1.10.10.10|G3DSA:3.40.50.2300|PF00072|PF00486|PS50110|PTHR26402|PTHR26402:SF117|SM00448|SM00862|SSF46894|SSF52172
arcB|arcB|AP_003753.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000014|IPR000700|IPR001789|IPR003594|IPR003661|IPR004358|IPR005467|IPR008207|IPR009082|IPR011006|IPR013767|IPR014409|IPR027460	Aerobic respiration control sensor protein ArcB, transmembrane domain|CheY-like superfamily|Histidine kinase-like ATPase, ATP-binding domain|PAS domain|PAS fold|PAS-associated, C-terminal|Signal transduction histidine kinase, core|Signal transduction histidine kinase, homodimeric domain|Signal transduction histidine kinase, hybrid-type, aerobic respiration control ArcB|Signal transduction histidine kinase, phosphotransfer (Hpt) domain|Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal|Signal transduction response regulator, receiver domain	GO:0000155|GO:0000156|GO:0000160|GO:0004673|GO:0004871|GO:0005524|GO:0006355|GO:0007165|GO:0016020|GO:0016021|GO:0016310|GO:0016772	G3DSA:1.10.287.130|G3DSA:1.10.287.970|G3DSA:1.20.120.160|G3DSA:3.30.450.20|G3DSA:3.30.565.10|G3DSA:3.40.50.2300|PF00072|PF00512|PF00989|PF01627|PF02518|PIRSF003182|PR00344|PS50109|PS50110|PS50112|PS50113|PS50894|PTHR24423|SM00073|SM00091|SM00387|SM00388|SM00448|SSF47226|SSF47384|SSF52172|SSF55785|SSF55874|TIGR00229
argA|argA|AP_003381.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000182|IPR001048|IPR010167|IPR016181	Acyl-CoA N-acyltransferase|Amino-acid N-acetyltransferase (ArgA)|Aspartate/glutamate/uridylate kinase|GNAT domain	GO:0004042|GO:0005737|GO:0006526|GO:0008080|GO:0008652	G3DSA:3.40.1160.10|G3DSA:3.40.630.30|MF_01105|PF00583|PF00696|PIRSF000423|PS51186|PTHR30602|SSF53633|SSF55729|TIGR01890
argB|argB|AP_003851.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001048|IPR004662	Acetylglutamate kinase|Aspartate/glutamate/uridylate kinase	GO:0003991|GO:0005737|GO:0006526|GO:0008652	G3DSA:3.40.1160.10|MF_00082_B|PF00696|PIRSF000728|PTHR32338|SSF53633|TIGR00761
argC|argC|AP_003852.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000534|IPR000706|IPR012280|IPR016040|IPR023013	N-acetyl-gamma-glutamyl-phosphate reductase, active site|N-acetyl-gamma-glutamyl-phosphate reductase, type 1|NAD(P)-binding domain|Semialdehyde dehydrogenase, NAD-binding|Semialdehyde dehydrogenase, dimerisation domain	GO:0003942|GO:0005737|GO:0006520|GO:0006526|GO:0008652|GO:0016620|GO:0046983|GO:0051287|GO:0055114	G3DSA:3.30.360.10|G3DSA:3.40.50.720|MF_00150|PF01118|PF02774|PS01224|PTHR32338|PTHR32338:SF0|SM00859|SSF51735|SSF55347|TIGR01850
argD|argD|AP_004430.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004636|IPR005814|IPR015421|IPR015422|IPR015424|IPR017652	Acetyl/Succinylornithine transaminase family, bacteria|Aminotransferase class-III|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2|Transaminase, Acetylornithine/Succinylornithine family	GO:0003824|GO:0006520|GO:0006525|GO:0008483|GO:0030170	G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF00202|PIRSF000521|PTHR11986|PTHR11986:SF19|SSF53383|TIGR00707|TIGR03246
argE|argE|AP_003853.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001261|IPR002933|IPR010169|IPR011650	Acetylornithine deacetylase (ArgE)|ArgE/DapE/ACY1/CPG2/YscS, conserved site|Peptidase M20|Peptidase M20, dimerisation domain	GO:0005737|GO:0006508|GO:0006526|GO:0008152|GO:0008237|GO:0008270|GO:0008777|GO:0016787|GO:0050897	G3DSA:3.30.70.360|G3DSA:3.40.630.10|MF_01108|PF01546|PF07687|PS00758|PS00759|PTHR11014|PTHR11014:SF5|SSF53187|SSF55031|TIGR01892
argF|argF|AP_000927.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002292|IPR006130|IPR006131|IPR006132|IPR024904	Aspartate/ornithine carbamoyltransferase|Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain|Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding|Ornithine carbamoyltransferase|Ornithine/putrescine carbamoyltransferase	GO:0004585|GO:0006520|GO:0006591|GO:0016597|GO:0016743	G3DSA:3.40.50.1370|MF_01109|PF00185|PF02729|PR00100|PR00102|PS00097|PTHR11405|SSF53671|TIGR00658
argG|argG|AP_003716.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001518|IPR014729|IPR018223|IPR023437|IPR024073|IPR024074	Argininosuccinate synthase|Argininosuccinate synthase, conserved site|Argininosuccinate synthase, type 2 subfamily|Argininosuccinate synthetase mutimerisation domain, C-terminal tail|Argininosuccinate synthetase, catalytic/multimerisation domain body|Rossmann-like alpha/beta/alpha sandwich fold	GO:0004055|GO:0005524|GO:0006526|GO:0042803	G3DSA:1.10.287.400|G3DSA:3.40.50.620|G3DSA:3.90.1260.10|MF_00581|PF00764|PS00564|PS00565|PTHR11587|SSF52402|SSF69864|TIGR00032
argH|argH|AP_003850.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000362|IPR003031|IPR008948|IPR009049|IPR020557|IPR022761|IPR024083	Argininosuccinate lyase|Delta crystallin|Fumarase/histidase, N-terminal|Fumarate lyase|Fumarate lyase, N-terminal|Fumarate lyase, conserved site|L-Aspartase-like	GO:0003824|GO:0004056|GO:0042450	G3DSA:1.10.275.10|G3DSA:1.10.40.30|G3DSA:1.20.200.10|MF_00006|PF00206|PR00145|PR00149|PS00163|PTHR11444|PTHR11444:SF3|SSF48557|TIGR00838
argI|argI|AP_004750.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002292|IPR006130|IPR006131|IPR006132|IPR024904	Aspartate/ornithine carbamoyltransferase|Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain|Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding|Ornithine carbamoyltransferase|Ornithine/putrescine carbamoyltransferase	GO:0004585|GO:0006520|GO:0006591|GO:0016597|GO:0016743	G3DSA:3.40.50.1370|MF_01109|PF00185|PF02729|PR00100|PR00102|PS00097|PTHR11405|SSF53671|TIGR00658
argK|argK|AP_003476.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR005129|IPR009082|IPR027417	ArgK protein|P-loop containing nucleoside triphosphate hydrolase|Signal transduction histidine kinase, homodimeric domain	GO:0004871|GO:0007165	G3DSA:1.10.287.130|G3DSA:1.20.5.170|G3DSA:3.40.50.300|PF03308|PTHR23408|PTHR23408:SF3|SSF52540|TIGR00750
argO|argO|AP_003481.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001123|IPR004777|IPR023445	Arginine exporter protein ArgO, enterobacteria|L-lysine exporter/arginine exporter|Lysine-type exporter protein (LYSE/YGGA)	GO:0006865|GO:0015181|GO:0015809|GO:0016020|GO:0016021	MF_01901|PF01810|PTHR30086|PTHR30086:SF0|TIGR00948
argP|argP|AP_003474.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000847|IPR005119|IPR011991|IPR017685|IPR023490	Chromosome initiation inhibitor|LysR, substrate-binding|Transcription regulator ArgP|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain	GO:0003700|GO:0006355	G3DSA:1.10.10.10|G3DSA:3.40.190.10|MF_00513|PF00126|PF03466|PR00039|PS50931|PTHR30216|SSF46785|SSF53850|TIGR03298
argR|argR|AP_003779.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001669|IPR011991|IPR020899|IPR020900|IPR024946	Arginine repressor|Arginine repressor C-terminal-like domain|Arginine repressor, C-terminal|Arginine repressor, DNA-binding domain|Winged helix-turn-helix DNA-binding domain	GO:0003700|GO:0006355|GO:0006525|GO:0034618|GO:0051259	G3DSA:1.10.10.10|G3DSA:3.30.1360.40|MF_00173|PD007402|PF01316|PF02863|PR01467|SSF46785|SSF55252|TIGR01529
argS|argS|AP_002496.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001278|IPR001412|IPR005148|IPR008909|IPR009080|IPR014729|IPR015945	Aminoacyl-tRNA synthetase, class 1a, anticodon-binding|Aminoacyl-tRNA synthetase, class I, conserved site|Arginine-tRNA ligase, class Ia|Arginyl tRNA synthetase N-terminal domain|Arginyl-tRNA synthetase, class Ia, core|DALR anticodon binding|Rossmann-like alpha/beta/alpha sandwich fold	GO:0000166|GO:0004812|GO:0004814|GO:0005524|GO:0005737|GO:0006418|GO:0006420	G3DSA:1.10.730.10|G3DSA:3.30.1360.70|G3DSA:3.40.50.620|MF_00123|PF00750|PF03485|PF05746|PR01038|PS00178|PTHR11956|SM00836|SM01016|SSF47323|SSF52374|SSF55190|TIGR00456
argT|argT|AP_002910.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001638|IPR005768|IPR018313	Extracellular solute-binding protein, family 3|Extracellular solute-binding protein, family 3, conserved site|Lysine-arginine-ornithine-binding periplasmic protein	GO:0005215|GO:0006810|GO:0030288	G3DSA:3.40.190.10|PF00497|PS01039|PTHR18966|SM00062|SSF53850|TIGR01096
arnT|arnT|AP_002854.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003342|IPR022839	Glycosyl transferase, family 39|Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase	GO:0000030|GO:0006493|GO:0016020|GO:0016763	MF_01165|PF02366|PS51257
aroA|aroA|AP_001538.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001986|IPR006264|IPR013792|IPR023193	3-phosphoshikimate 1-carboxyvinyltransferase|3-phosphoshikimate 1-carboxyvinyltransferase, conserved site|Enolpyruvate transferase domain|RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta	GO:0003824|GO:0003866|GO:0016765	G3DSA:3.65.10.10|MF_00210|PF00275|PIRSF000505|PS00104|PS00885|PTHR21090|PTHR21090:SF3|SSF55205|TIGR01356
aroB|aroB|AP_004401.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR016037	3-dehydroquinate synthase AroB	GO:0003856|GO:0005737|GO:0009073	G3DSA:1.20.1090.10|G3DSA:3.40.50.1970|MF_00110|PF01761|PIRSF001455|PTHR21090|SSF56796|TIGR01357
aroC|aroC|AP_002929.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000453|IPR020541	Chorismate synthase|Chorismate synthase, conserved site	GO:0004107|GO:0009073	G3DSA:3.60.150.10|MF_00300|PF01264|PIRSF001456|PS00787|PS00788|PS00789|PTHR21085|SSF103263|TIGR00033
aroD|aroD|AP_002313.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001381|IPR013785|IPR018508	3-dehydroquinate dehydratase, active site|Aldolase-type TIM barrel|Dehydroquinase class I	GO:0003824|GO:0003855	G3DSA:3.20.20.70|MF_00214|PF01487|PS01028|PTHR21088|PTHR21088:SF0|SSF51569|TIGR01093
aroE|aroE|AP_004509.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR006151|IPR011342|IPR013708|IPR016040|IPR022893	NAD(P)-binding domain|Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase|Shikimate dehydrogenase|Shikimate dehydrogenase substrate binding, N-terminal|Shikimate, quinate/shikimate dehydrogenase	GO:0004764|GO:0019632|GO:0050661|GO:0055114	G3DSA:3.40.192.10|G3DSA:3.40.50.720|MF_00222|PF01488|PF08501|PTHR21089|PTHR21089:SF0|SSF51735|SSF53223|TIGR00507
aroF|aroF|AP_003182.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR006218|IPR006219|IPR013785	Aldolase-type TIM barrel|DAHP synthetase I/KDSA|DHAP synthase, class 1	GO:0003824|GO:0003849|GO:0009058|GO:0009073	G3DSA:3.20.20.70|PF00793|PIRSF001361|PTHR21225|SSF51569|TIGR00034
aroG|aroG|AP_001385.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR006218|IPR006219|IPR013785	Aldolase-type TIM barrel|DAHP synthetase I/KDSA|DHAP synthase, class 1	GO:0003824|GO:0003849|GO:0009058|GO:0009073	G3DSA:3.20.20.70|PF00793|PIRSF001361|PTHR21225|SSF51569|TIGR00034
aroH|aroH|AP_002324.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR006218|IPR006219|IPR013785	Aldolase-type TIM barrel|DAHP synthetase I/KDSA|DHAP synthase, class 1	GO:0003824|GO:0003849|GO:0009058|GO:0009073	G3DSA:3.20.20.70|PF00793|PIRSF001361|PTHR21225|SSF51569|TIGR00034
aroK|aroK|AP_004400.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000623|IPR023000|IPR027417	P-loop containing nucleoside triphosphate hydrolase|Shikimate kinase, conserved site|Shikimate kinase/Threonine synthase-like 1		G3DSA:3.40.50.300|MF_00109|PF01202|PR01100|PS01128|PTHR21087|SSF52540
aroL|aroL|AP_001039.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000623|IPR023000|IPR027417|IPR027544	P-loop containing nucleoside triphosphate hydrolase|Shikimate kinase 2|Shikimate kinase, conserved site|Shikimate kinase/Threonine synthase-like 1	GO:0004765|GO:0009073	G3DSA:3.40.50.300|MF_00109|MF_01269|PF01202|PR01100|PS01128|PTHR21087|SSF52540
aroM|aroM|AP_001041.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR010843	Uncharacterised protein family AroM		PD037589|PF07302
aroP|aroP|AP_000773.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002293|IPR004840|IPR004841	Amino acid permease domain|Amino acid permease, conserved site|Amino acid/polyamine transporter I	GO:0003333|GO:0006810|GO:0006865|GO:0015171|GO:0016020|GO:0016021|GO:0055085	PF00324|PIRSF006060|PS00218|PTHR11785|PTHR11785:SF26
arpA|arpA|AP_004518.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002110|IPR012927|IPR020683	Ankyrin repeat|Ankyrin repeat-containing domain|ShET2 enterotoxin, N-terminal	GO:0005515	G3DSA:1.25.40.20|PF07906|SM00248|SSF48403
arsB|arsB|AP_004291.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000802	Arsenite/antimonite efflux pump membrane protein,  ArsB	GO:0015105|GO:0015700|GO:0016021	PF02040|PR00758|PTHR10283|PTHR10283:SF21|TIGR00935
arsC|arsC|AP_004290.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR006659|IPR006660|IPR012336	Arsenate reductase|Arsenate reductase-like|Thioredoxin-like fold	GO:0008794|GO:0055114	G3DSA:3.40.30.10|PF03960|PS51353|PTHR30041|SSF52833|TIGR00014
arsR|arsR|AP_004292.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001845|IPR011991|IPR018334	ArsR-type transcription regulator, HTH motif|HTH ArsR-type DNA-binding domain|Winged helix-turn-helix DNA-binding domain	GO:0003700|GO:0005622|GO:0006355	G3DSA:1.10.10.10|PF01022|PR00778|PS00846|PS50987|SM00418|SSF46785
artI|artI|AP_001494.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001638|IPR005768|IPR018313	Extracellular solute-binding protein, family 3|Extracellular solute-binding protein, family 3, conserved site|Lysine-arginine-ornithine-binding periplasmic protein	GO:0005215|GO:0006810|GO:0030288	G3DSA:3.40.190.10|PF00497|PS01039|PTHR18966|SM00062|SSF53850|TIGR01096
artJ|artJ|AP_001491.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001638|IPR005768|IPR018313	Extracellular solute-binding protein, family 3|Extracellular solute-binding protein, family 3, conserved site|Lysine-arginine-ornithine-binding periplasmic protein	GO:0005215|GO:0006810|GO:0030288	G3DSA:3.40.190.10|PF00497|PS01039|PTHR18966|SM00062|SSF53850|TIGR01096
artM|artM|AP_001492.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000515|IPR010065	Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family|Binding-protein-dependent transport systems inner membrane component	GO:0005215|GO:0006810|GO:0016020|GO:0016021	G3DSA:1.10.3720.10|PF00528|PS50928|PTHR30614|PTHR30614:SF0|SSF161098|TIGR01726
artP|artP|AP_001495.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003439|IPR003593|IPR017871|IPR027417	AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase	GO:0000166|GO:0005524|GO:0016887|GO:0017111	G3DSA:3.40.50.300|PF00005|PS00211|PS50893|PTHR24220|PTHR24220:SF179|SM00382|SSF52540
artQ|artQ|AP_001493.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000515|IPR010065	Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family|Binding-protein-dependent transport systems inner membrane component	GO:0005215|GO:0006810|GO:0016020|GO:0016021	G3DSA:1.10.3720.10|PF00528|PS50928|PTHR30133|SSF161098|TIGR01726
ascB|ascB|AP_003283.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001360|IPR013781|IPR017853|IPR018120	Glycoside hydrolase, catalytic domain|Glycoside hydrolase, family 1|Glycoside hydrolase, family 1, active site|Glycoside hydrolase, superfamily	GO:0003824|GO:0004553|GO:0005975	G3DSA:3.20.20.80|PF00232|PR00131|PS00572|PS00653|PTHR10353|PTHR10353:SF4|SSF51445
ascF|ascF|AP_003282.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001996|IPR003352|IPR004719|IPR013013|IPR018113	Phosphotransferase system EIIB/cysteine, phosphorylation site|Phosphotransferase system, EIIB component, type 1|Phosphotransferase system, EIIC|Phosphotransferase system, EIIC component, type 1|Phosphotransferase system, maltose/glucose-specific IIC component	GO:0005351|GO:0006810|GO:0008982|GO:0009401|GO:0016020|GO:0016021	G3DSA:3.30.1360.60|PF00367|PF02378|PS01035|PS51098|PS51103|PTHR30175|PTHR30175:SF1|SSF55604|TIGR00852
ascG|ascG|AP_003281.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000843|IPR010982	Lambda repressor-like, DNA-binding domain|Transcription regulator HTH, LacI	GO:0003677|GO:0003700|GO:0005622|GO:0006355	G3DSA:1.10.260.40|G3DSA:3.40.50.2300|PF00356|PF13377|PS00356|PS50932|PTHR30146|PTHR30146:SF7|SM00354|SSF47413|SSF53822
asd|asd|AP_004358.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000319|IPR000534|IPR011534|IPR012080|IPR012280|IPR016040	Aspartate-semialdehyde dehydrogenase|Aspartate-semialdehyde dehydrogenase, conserved site|Aspartate-semialdehyde dehydrogenase, gamma-type|NAD(P)-binding domain|Semialdehyde dehydrogenase, NAD-binding|Semialdehyde dehydrogenase, dimerisation domain	GO:0003942|GO:0004073|GO:0005737|GO:0006520|GO:0008652|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0016620|GO:0046983|GO:0050661|GO:0051287|GO:0055114	G3DSA:3.30.360.10|G3DSA:3.40.50.720|MF_02121|PF01118|PF02774|PIRSF000148|PS01103|PTHR10174|SM00859|SSF51735|SSF55347|TIGR01745
aslA|aslA|AP_003999.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000917|IPR017849|IPR017850|IPR024607	Alkaline phosphatase-like, alpha/beta/alpha|Alkaline-phosphatase-like, core domain|Sulfatase|Sulfatase, conserved site	GO:0003824|GO:0008152|GO:0008484	G3DSA:3.40.720.10|PF00884|PS00149|PS00523|PTHR10342|PTHR10342:SF109|SSF53649
aslB|aslB|AP_004000.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR007197|IPR013785|IPR023867|IPR023885	4Fe4S-binding SPASM domain|Aldolase-type TIM barrel|Anaerobic sulphatase maturase, radical SAM|Radical SAM	GO:0003824|GO:0016491|GO:0051536	G3DSA:3.20.20.70|PD968187|PF04055|PF13186|PF13353|PTHR30088|PTHR30088:SF0|SSF102114|TIGR03942|TIGR04085
asmA|asmA|AP_002664.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR007844	AsmA		PF05170|PTHR30441
asnA|asnA|AP_004043.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004618|IPR006195	Aminoacyl-tRNA synthetase, class II|Aspartate--ammonia ligase	GO:0004071|GO:0004812|GO:0005737|GO:0006418|GO:0006529	G3DSA:3.30.930.10|MF_00555|PF03590|PIRSF001555|PS50862|PTHR30073|PTHR30073:SF0|SSF55681|TIGR00669
asnB|asnB|AP_001312.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000583|IPR001962|IPR006426|IPR014729|IPR017932	Asparagine synthase|Asparagine synthase, glutamine-hydrolyzing|Class II glutamine amidotransferase domain|Glutamine amidotransferase type 2 domain|Rossmann-like alpha/beta/alpha sandwich fold	GO:0004066|GO:0006529|GO:0008152	G3DSA:3.40.50.620|G3DSA:3.60.20.10|PF00733|PF13537|PIRSF001589|PS51278|PTHR11772|SSF52402|SSF56235|TIGR01536
asnC|asnC|AP_004044.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000485|IPR011008|IPR011991|IPR019885|IPR019887|IPR019888	AsnC-type HTH domain|Dimeric alpha-beta barrel|Transcription regulator AsnC-type|Transcription regulator AsnC-type, C-terminal|Transcription regulator HTH, AsnC-type, conserved site|Winged helix-turn-helix DNA-binding domain	GO:0003700|GO:0005622|GO:0006355|GO:0043565	G3DSA:1.10.10.10|G3DSA:3.30.70.920|PF01037|PF13404|PR00033|PS00519|PS50956|SM00344|SSF46785|SSF54909
asnS|asnS|AP_001560.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002312|IPR004364|IPR004365|IPR004522|IPR006195|IPR012340|IPR018150	Aminoacyl-tRNA synthetase, class II|Aminoacyl-tRNA synthetase, class II (D/K/N)|Aminoacyl-tRNA synthetase, class II (D/K/N)-like|Asparagine-tRNA ligase, class IIb|Aspartyl/Asparaginyl-tRNA synthetase, class IIb|Nucleic acid binding, OB-fold, tRNA/helicase-type|Nucleic acid-binding, OB-fold	GO:0000166|GO:0003676|GO:0004812|GO:0004816|GO:0005524|GO:0005737|GO:0006418|GO:0006421	G3DSA:2.40.50.140|G3DSA:3.30.930.10|MF_00534|PF00152|PF01336|PR01042|PS50862|PTHR22594|PTHR22594:SF6|SSF50249|SSF55681|TIGR00457
aspA|aspA|AP_004640.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000362|IPR003031|IPR004708|IPR008948|IPR018951|IPR020557|IPR022761|IPR024083	Aspartate ammonia-lyase|Delta crystallin|Fumarase C, C-terminal|Fumarase/histidase, N-terminal|Fumarate lyase|Fumarate lyase, N-terminal|Fumarate lyase, conserved site|L-Aspartase-like	GO:0003824|GO:0006099|GO:0006531|GO:0008797|GO:0016829	G3DSA:1.10.275.10|G3DSA:1.10.40.30|G3DSA:1.20.200.10|PF00206|PF10415|PR00145|PR00149|PS00163|PTHR11444|PTHR11444:SF8|SSF48557|TIGR00839
aspC|aspC|AP_001558.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000796|IPR004838|IPR004839|IPR015421|IPR015424	Aminotransferase, class I/classII|Aminotransferases, class-I, pyridoxal-phosphate-binding site|Aspartate/other aminotransferase|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1	GO:0003824|GO:0006520|GO:0008483|GO:0009058|GO:0030170	G3DSA:3.40.640.10|PF00155|PR00799|PS00105|PTHR11879|PTHR11879:SF0|SSF53383
aspS|aspS|AP_002486.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002312|IPR004115|IPR004364|IPR004365|IPR004524|IPR006195|IPR012340|IPR018150	Aminoacyl-tRNA synthetase, class II|Aminoacyl-tRNA synthetase, class II (D/K/N)|Aminoacyl-tRNA synthetase, class II (D/K/N)-like|Aspartate-tRNA ligase, class IIb, bacterial/mitochondrial-type|Aspartyl/Asparaginyl-tRNA synthetase, class IIb|GAD domain|Nucleic acid binding, OB-fold, tRNA/helicase-type|Nucleic acid-binding, OB-fold	GO:0000166|GO:0003676|GO:0004812|GO:0005524|GO:0005737|GO:0006418|GO:0016874	G3DSA:2.40.50.140|G3DSA:3.30.1360.30|G3DSA:3.30.930.10|MF_00044_B|PF00152|PF01336|PF02938|PR01042|PS50862|PTHR22594|PTHR22594:SF5|SSF50249|SSF55261|SSF55681|TIGR00459
asr|asr|AP_002218.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR009435	Acid shock	GO:0010447|GO:0042597	PF06392
astA|astA|AP_002366.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR007041|IPR009010|IPR016181|IPR017650	Acyl-CoA N-acyltransferase|Arginine N-succinyltransferase Ast/AOST|Arginine N-succinyltransferase AstA|Aspartate decarboxylase-like domain	GO:0006527|GO:0008791	G3DSA:2.40.40.20|G3DSA:3.40.630.30|MF_01171|PF04958|PTHR30420|PTHR30420:SF0|SSF55729|TIGR03243|TIGR03244
astB|astB|AP_002364.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR007079	Succinylarginine dihydrolase	GO:0006525|GO:0009015	G3DSA:3.75.10.20|MF_01172|PF04996|PTHR30420|PTHR30420:SF0|SSF55909|TIGR03241
astC|astC|AP_002367.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004636|IPR005814|IPR015421|IPR015422|IPR015424|IPR017652|IPR026330	Acetyl/Succinylornithine transaminase family, bacteria|Aminotransferase class-III|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2|Succinylornithine transaminase|Transaminase, Acetylornithine/Succinylornithine family	GO:0003824|GO:0006520|GO:0006525|GO:0006527|GO:0006593|GO:0008483|GO:0030170|GO:0043825	G3DSA:3.40.640.10|G3DSA:3.90.1150.10|MF_01107|MF_01173|PF00202|PIRSF000521|PS00600|PTHR11986|PTHR11986:SF19|SSF53383|TIGR00707|TIGR03246
astD|astD|AP_002365.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR015590|IPR016160|IPR016161|IPR016162|IPR016163|IPR017649	Aldehyde dehydrogenase domain|Aldehyde dehydrogenase, C-terminal|Aldehyde dehydrogenase, N-terminal|Aldehyde dehydrogenase, conserved site|Aldehyde/histidinol dehydrogenase|Succinylglutamic semialdehyde dehydrogenase	GO:0006527|GO:0008152|GO:0016491|GO:0016620|GO:0043824|GO:0055114	G3DSA:3.40.309.10|G3DSA:3.40.605.10|MF_01174|PF00171|PS00070|PS00687|PTHR11699|PTHR11699:SF24|SSF53720|TIGR03240
astE|astE|AP_002363.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR007036|IPR016681	Succinylglutamate desuccinylase|Succinylglutamate desuccinylase/aspartoacylase	GO:0008152|GO:0008270|GO:0009017|GO:0016788|GO:0019544|GO:0019545	G3DSA:3.40.630.10|MF_00767|PF04952|PIRSF017020|PTHR15162|PTHR15162:SF0|SSF53187|TIGR03242
atoA|atoA|AP_002821.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004164|IPR004165|IPR012791	3-oxoacid CoA-transferase, subunit B|Coenzyme A transferase active site|Coenzyme A transferase family I	GO:0008152|GO:0008410	G3DSA:3.40.810.20|PF01144|PS01274|PTHR13707|PTHR13707:SF16|SM00882|SSF100950|TIGR02428
atoB|atoB|AP_002823.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002155|IPR016038|IPR016039|IPR020610|IPR020613|IPR020615|IPR020616|IPR020617	Thiolase|Thiolase, C-terminal|Thiolase, N-terminal|Thiolase, active site|Thiolase, acyl-enzyme intermediate active site|Thiolase, conserved site|Thiolase-like|Thiolase-like, subgroup	GO:0003824|GO:0008152|GO:0016747	G3DSA:3.40.47.10|PF00108|PF02803|PIRSF000429|PS00098|PS00099|PS00737|PTHR18919|PTHR18919:SF9|SSF53901|TIGR01930
atoC|atoC|AP_002819.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001789|IPR002078|IPR002197|IPR003593|IPR009057|IPR011006|IPR027417	AAA+ ATPase domain|CheY-like superfamily|DNA binding HTH domain,  Fis-type|Homeodomain-like|P-loop containing nucleoside triphosphate hydrolase|RNA polymerase sigma factor 54 interaction domain|Signal transduction response regulator, receiver domain	GO:0000156|GO:0000160|GO:0000166|GO:0003677|GO:0003700|GO:0005524|GO:0006355|GO:0008134|GO:0017111	G3DSA:1.10.10.60|G3DSA:1.10.8.60|G3DSA:3.40.50.2300|G3DSA:3.40.50.300|PF00072|PF00158|PF02954|PR01590|PTHR32071|SM00382|SM00448|SSF46689|SSF52172|SSF52540
atoD|atoD|AP_002820.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004163|IPR004165|IPR012792	3-oxoacid CoA-transferase, subunit A|Coenzyme A transferase binding site|Coenzyme A transferase family I	GO:0008152|GO:0008410	G3DSA:3.40.1080.10|PF01144|PS01273|PTHR13707|PTHR13707:SF3|SM00882|SSF100950|TIGR02429
atoE|atoE|AP_002822.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR006160|IPR006161	Conserved hypothetical protein CHP00336|Short chain fatty acid transporter		PF02667|TIGR00366
atoS|atoS|AP_002818.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000014|IPR003594|IPR003660|IPR003661|IPR004358|IPR009082|IPR013767	HAMP linker domain|Histidine kinase-like ATPase, ATP-binding domain|PAS domain|PAS fold|Signal transduction histidine kinase, homodimeric domain|Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal	GO:0000155|GO:0004871|GO:0005524|GO:0006355|GO:0007165|GO:0016020|GO:0016021|GO:0016310|GO:0016772	G3DSA:1.10.287.130|G3DSA:3.30.450.20|G3DSA:3.30.565.10|PF00512|PF00672|PF00989|PF02518|PR00344|PTHR24423|PTHR24423:SF36|SM00091|SM00304|SM00387|SM00388|SSF47384|SSF55785|SSF55874|TIGR00229
atpA|atpA|AP_004053.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000194|IPR000793|IPR004100|IPR005294|IPR018538|IPR020003|IPR023366|IPR027417	ATPase, F1 complex, alpha subunit|ATPase, F1/A1 complex, alpha subunit, N-terminal|ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal|ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain|ATPase, alpha/beta subunit, N-terminal|ATPase, alpha/beta subunit, nucleotide-binding domain, active site|HerA-ATP synthase, barrel domain|P-loop containing nucleoside triphosphate hydrolase	GO:0005524|GO:0015986|GO:0015991|GO:0015992|GO:0016820|GO:0033178|GO:0045261|GO:0046034|GO:0046933|GO:0046961	G3DSA:1.20.150.20|G3DSA:2.40.30.20|G3DSA:3.40.50.300|MF_01346|PF00006|PF00306|PF09378|PS00152|PTHR15184|PTHR15184:SF3|SSF47917|SSF50615|SSF52540|TIGR00962
atpB|atpB|AP_004049.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000568|IPR023011	ATPase, F0 complex, subunit A|ATPase, F0 complex, subunit A, active site	GO:0015078|GO:0015986|GO:0045263	G3DSA:1.20.120.220|MF_01393|PF00119|PR00123|PS00449|PTHR11410|PTHR11410:SF2|SSF81336|TIGR01131
atpC|atpC|AP_004056.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001469|IPR020546|IPR020547	ATPase, F1 complex, delta/epsilon subunit|ATPase, F1 complex, delta/epsilon subunit, C-terminal|ATPase, F1 complex, delta/epsilon subunit, N-terminal	GO:0015986|GO:0045261|GO:0046933|GO:0046961	G3DSA:1.20.5.440|G3DSA:2.60.15.10|MF_00530|PD000944|PF00401|PF02823|PTHR13822|PTHR13822:SF2|SSF46604|SSF51344|TIGR01216
atpD|atpD|AP_004055.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000194|IPR000793|IPR003593|IPR004100|IPR005722|IPR020003|IPR024034|IPR027417	AAA+ ATPase domain|ATPase, F1 complex beta subunit/V1 complex, C-terminal|ATPase, F1 complex, beta subunit|ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal|ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain|ATPase, alpha/beta subunit, N-terminal|ATPase, alpha/beta subunit, nucleotide-binding domain, active site|P-loop containing nucleoside triphosphate hydrolase	GO:0000166|GO:0005524|GO:0015986|GO:0015991|GO:0015992|GO:0016820|GO:0017111|GO:0033178|GO:0045261|GO:0046034|GO:0046933	G3DSA:1.10.1140.10|G3DSA:2.40.10.170|G3DSA:3.40.50.300|MF_01347|PF00006|PF00306|PF02874|PS00152|PTHR15184|PTHR15184:SF8|SM00382|SSF47917|SSF50615|SSF52540|TIGR01039
atpE|atpE|AP_004050.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000454|IPR002379|IPR005953|IPR020537	ATPase, F0 complex, subunit C|ATPase, F0 complex, subunit C, DCCD-binding site|ATPase, F0 complex, subunit C, bacterial/chloroplast|V-ATPase proteolipid subunit C-like domain	GO:0015078|GO:0015986|GO:0015991|GO:0033177|GO:0045263	G3DSA:1.20.20.10|MF_01396|PF00137|PR00124|PS00605|SSF81333|TIGR01260
atpF|atpF|AP_004051.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002146|IPR005864	ATPase, F0 complex, subunit B, bacterial|ATPase, F0 complex, subunit B/B', bacterial/chloroplast	GO:0015078|GO:0015986|GO:0045263	G3DSA:1.20.5.620|MF_01398|PF00430|SSF81573|TIGR01144
atpG|atpG|AP_004054.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000131|IPR023632|IPR023633	ATPase, F1 complex, gamma subunit|ATPase, F1 complex, gamma subunit conserved site|ATPase, F1 complex, gamma subunit domain	GO:0015986|GO:0045261|GO:0046933|GO:0046961	G3DSA:1.10.287.80|G3DSA:3.40.1380.10|MF_00815|PF00231|PR00126|PS00153|PTHR11693|PTHR11693:SF10|SSF52943|TIGR01146
atpH|atpH|AP_004052.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000711|IPR020781|IPR026015	ATPase, F1 complex, OSCP/delta subunit|ATPase, F1 complex, OSCP/delta subunit, conserved site|F1F0 ATP synthase OSCP/delta subunit, N-terminal domain	GO:0015986|GO:0016020|GO:0046933	G3DSA:1.10.520.20|MF_01416|PF00213|PR00125|PS00389|PTHR11910|PTHR11910:SF0|SSF47928|TIGR01145
atpI|atpI|AP_004048.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR005598	ATP synthase protein I		PF03899
avtA|avtA|AP_004220.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004839|IPR015421|IPR015422|IPR015424	Aminotransferase, class I/classII|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2	GO:0003824|GO:0009058|GO:0030170	G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF00155|PTHR11751|PTHR11751:SF128|SSF53383
azoR|azoR|AP_002037.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003680|IPR023048	Flavodoxin-like fold|NADH-azoreductase, FMN-dependent	GO:0016661|GO:0055114	G3DSA:3.40.50.360|MF_01216|PF02525|PTHR10204|PTHR10204:SF4|SSF52218
bacA|bacA|AP_003607.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003824	Bacitracin resistance protein BacA	GO:0016020|GO:0016311|GO:0050380	MF_01006|PF02673|PTHR30622|PTHR30622:SF0|TIGR00753
baeR|baeR|AP_002679.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001789|IPR001867|IPR011006|IPR011991|IPR016032	CheY-like superfamily|Signal transduction response regulator, C-terminal|Signal transduction response regulator, C-terminal effector|Signal transduction response regulator, receiver domain|Winged helix-turn-helix DNA-binding domain	GO:0000156|GO:0000160|GO:0003677|GO:0006355	G3DSA:1.10.10.10|G3DSA:3.40.50.2300|PF00072|PF00486|PS50110|PTHR26402|PTHR26402:SF63|SM00448|SM00862|SSF46894|SSF52172
baeS|baeS|AP_002678.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003594|IPR003660|IPR003661|IPR004358|IPR009082	HAMP linker domain|Histidine kinase-like ATPase, ATP-binding domain|Signal transduction histidine kinase, homodimeric domain|Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal	GO:0000155|GO:0004871|GO:0005524|GO:0007165|GO:0016020|GO:0016021|GO:0016310|GO:0016772	G3DSA:1.10.287.130|G3DSA:3.30.565.10|PF00512|PF00672|PF02518|PR00344|PTHR24423|PTHR24423:SF137|SM00304|SM00387|SM00388|SSF158472|SSF47384|SSF55874
barA|barA|AP_003352.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001789|IPR003594|IPR003660|IPR003661|IPR004358|IPR005467|IPR008207|IPR009082|IPR011006|IPR019247	CheY-like superfamily|HAMP linker domain|Histidine kinase BarA, N-terminal|Histidine kinase-like ATPase, ATP-binding domain|Signal transduction histidine kinase, core|Signal transduction histidine kinase, homodimeric domain|Signal transduction histidine kinase, phosphotransfer (Hpt) domain|Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal|Signal transduction response regulator, receiver domain	GO:0000155|GO:0000156|GO:0000160|GO:0004871|GO:0005524|GO:0006355|GO:0007165|GO:0016020|GO:0016021|GO:0016310|GO:0016772	G3DSA:1.10.287.130|G3DSA:1.20.120.160|G3DSA:3.30.565.10|G3DSA:3.40.50.2300|PF00072|PF00512|PF00672|PF01627|PF02518|PF09984|PR00344|PS50109|PS50110|PS50885|PS50894|PTHR24423|PTHR24423:SF360|SM00073|SM00304|SM00387|SM00388|SM00448|SSF158472|SSF47226|SSF47384|SSF52172|SSF55874
basR|basR|AP_004614.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001789|IPR001867|IPR011006|IPR011991|IPR016032	CheY-like superfamily|Signal transduction response regulator, C-terminal|Signal transduction response regulator, C-terminal effector|Signal transduction response regulator, receiver domain|Winged helix-turn-helix DNA-binding domain	GO:0000156|GO:0000160|GO:0003677|GO:0006355	G3DSA:1.10.10.10|G3DSA:3.40.50.2300|PF00072|PF00486|PS50110|PTHR26402|PTHR26402:SF117|SM00448|SM00862|SSF46894|SSF52172
basS|basS|AP_004613.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003594|IPR003660|IPR003661|IPR004358|IPR005467|IPR009082	HAMP linker domain|Histidine kinase-like ATPase, ATP-binding domain|Signal transduction histidine kinase, core|Signal transduction histidine kinase, homodimeric domain|Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal	GO:0000155|GO:0004871|GO:0005524|GO:0007165|GO:0016020|GO:0016021|GO:0016310|GO:0016772	G3DSA:1.10.287.130|G3DSA:3.30.565.10|PF00512|PF00672|PF02518|PR00344|PS50109|PS50885|PTHR24423|SM00304|SM00387|SM00388|SSF47384|SSF55874
bax|bax|AP_004222.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002901	Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase	GO:0004040|GO:0009253	PF01832
bcp|bcp|AP_003066.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000866|IPR012336	Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant|Thioredoxin-like fold	GO:0016209|GO:0016491|GO:0055114	G3DSA:3.40.30.10|PF00578|PS51352|PTHR10681|PTHR10681:SF5|SSF52833
bcr|bcr|AP_002780.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004734|IPR004812|IPR011701|IPR016196|IPR020846	Drug resistance transporter Bcr/CflA subfamily|Major facilitator superfamily|Major facilitator superfamily domain|Major facilitator superfamily domain, general substrate transporter|Multidrug resistance protein	GO:0005215|GO:0006810|GO:0015238|GO:0015893|GO:0016021|GO:0055085	G3DSA:1.20.1250.20|PF07690|PS50850|PTHR24003|SSF103473|TIGR00710|TIGR00880
bcsA|bcsA|AP_004260.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001173|IPR003919|IPR009875	Cellulose synthase, subunit A|Glycosyl transferase, family 2|PilZ domain	GO:0006011|GO:0016020|GO:0016759|GO:0035438	G3DSA:3.90.550.10|PF00535|PF07238|PR01439|PTHR32220|PTHR32220:SF0|SSF141371|SSF53448|TIGR03030
bcsB|bcsB|AP_004261.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003920|IPR018513	Cellulose synthase BcsB, bacterial|Cellulose synthase, subunit B	GO:0006011|GO:0016020	PF03170|PR01440|PTHR32220|PTHR32220:SF1
bcsC|bcsC|AP_004263.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR008410|IPR011990|IPR013026|IPR019734|IPR026931	Cellulose synthase operon C, C-terminal|Cellulose synthase operon protein C|Tetratricopeptide repeat|Tetratricopeptide repeat-containing domain|Tetratricopeptide-like helical	GO:0005515|GO:0019867|GO:0030244	G3DSA:1.25.40.10|PF05420|PF13414|PF13432|PS50005|PS50293|PTHR23083|PTHR23083:SF91|SM00028|SSF48452
bcsE|bcsE|AP_004258.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR017745	Cellulose biosynthesis protein BcsE		PF10995|TIGR03369
bcsF|bcsF|AP_004257.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR019995	Cellulose biosynthesis, BcsF/YhjT		PD053231|PF11120|TIGR03493
bcsG|bcsG|AP_004256.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR017744	Cellulose synthase operon protein YhjU		PF11658|TIGR03368
bcsZ|bcsZ|AP_004262.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002037|IPR008928|IPR012341|IPR019834	Glycoside hydrolase, family 8|Glycoside hydrolase, family 8, conserved site|Six-hairpin glycosidase|Six-hairpin glycosidase-like	GO:0003824|GO:0004553|GO:0005975	G3DSA:1.50.10.10|PF01270|PR00735|PS00812|SSF48208
bdm|bdm|AP_002104.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR019625	Biofilm-dependent modulation protein Bdm, putative		PF10684
betA|betA|AP_000964.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000172|IPR007867|IPR011533|IPR012132	Choline dehydrogenase|Glucose-methanol-choline oxidoreductase|Glucose-methanol-choline oxidoreductase, C-terminal|Glucose-methanol-choline oxidoreductase, N-terminal	GO:0006066|GO:0008812|GO:0016614|GO:0019285|GO:0050660|GO:0055114	G3DSA:3.50.50.60|MF_00750|PF00732|PF05199|PIRSF000137|PS00623|PS00624|PTHR11552|PTHR11552:SF22|SSF51905|SSF54373|TIGR01810
betB|betB|AP_000965.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR011264|IPR015590|IPR016160|IPR016161|IPR016162|IPR016163	Aldehyde dehydrogenase domain|Aldehyde dehydrogenase, C-terminal|Aldehyde dehydrogenase, N-terminal|Aldehyde dehydrogenase, conserved site|Aldehyde/histidinol dehydrogenase|Betaine aldehyde dehydrogenase	GO:0006578|GO:0008152|GO:0008802|GO:0016491|GO:0016620|GO:0055114	G3DSA:3.40.309.10|G3DSA:3.40.605.10|MF_00804|PF00171|PS00070|PS00687|PTHR11699|PTHR11699:SF47|SSF53720|TIGR01804
betI|betI|AP_000966.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001647|IPR009057|IPR011075|IPR015893|IPR017757|IPR023772	DNA-binding HTH domain, TetR-type|DNA-binding HTH domain, TetR-type, conserved site|Homeodomain-like|Tetracycline transcriptional regulator, TetR-like, C-terminal|Tetracycline transcriptional regulator, TetR-related, C-terminal|Transcriptional repressor BetI	GO:0003677	G3DSA:1.10.357.10|MF_00768|PF00440|PF13977|PR00455|PS01081|PS50977|SSF46689|SSF48498|TIGR03384
betT|betT|AP_000967.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000060|IPR018093	BCCT transporter family|BCCT transporter, conserved site	GO:0005215|GO:0006810|GO:0016020	PF02028|PS01303|PTHR30047|PTHR30047:SF0|TIGR00842
bfd|bfd|AP_004453.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR007419	BFD-like [2Fe-2S]-binding domain		PF04324
bfr|bfr|AP_004454.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002024|IPR008331|IPR009040|IPR009078|IPR012347	Bacterioferritin|Ferritin- like diiron domain|Ferritin-like superfamily|Ferritin-related|Ferritin/DPS protein domain	GO:0006826|GO:0006879|GO:0008199|GO:0016491|GO:0046914|GO:0055114	G3DSA:1.20.1260.10|PF00210|PIRSF002560|PR00601|PS00549|PS50905|PTHR30295|SSF47240|TIGR00754
bglA|bglA|AP_003460.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001360|IPR013781|IPR017853|IPR018120	Glycoside hydrolase, catalytic domain|Glycoside hydrolase, family 1|Glycoside hydrolase, family 1, active site|Glycoside hydrolase, superfamily	GO:0003824|GO:0004553|GO:0005975	G3DSA:3.20.20.80|PF00232|PR00131|PS00572|PS00653|PTHR10353|PTHR10353:SF4|SSF51445
bglB|bglB|AP_004066.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001360|IPR013781|IPR017853|IPR018120	Glycoside hydrolase, catalytic domain|Glycoside hydrolase, family 1|Glycoside hydrolase, family 1, active site|Glycoside hydrolase, superfamily	GO:0003824|GO:0004553|GO:0005975	G3DSA:3.20.20.80|PF00232|PR00131|PS00572|PS00653|PTHR10353|PTHR10353:SF4|SSF51445
bglF|bglF|AP_004065.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001127|IPR001996|IPR003352|IPR004719|IPR011055|IPR011297|IPR011535|IPR013013|IPR018113	Duplicated hybrid motif|Phosphotransferase system EIIB/cysteine, phosphorylation site|Phosphotransferase system, EIIB component, type 1|Phosphotransferase system, EIIC|Phosphotransferase system, EIIC component, type 1|Phosphotransferase system, beta-glucoside-specific IIABC component|Phosphotransferase system, glucose-like IIB component|Phosphotransferase system, maltose/glucose-specific IIC component|Phosphotransferase system, sugar-specific permease EIIA 1 domain	GO:0005351|GO:0005886|GO:0006810|GO:0008982|GO:0009401|GO:0016020|GO:0016021	G3DSA:2.70.70.10|G3DSA:3.30.1360.60|PF00358|PF00367|PF02378|PS00371|PS01035|PS51093|PS51098|PS51103|PTHR30175|PTHR30175:SF1|SSF51261|SSF55604|TIGR00826|TIGR00830|TIGR00852|TIGR01995
bglG|bglG|AP_004064.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001550|IPR004341|IPR011608	CAT RNA-binding domain|PRD|Transcription antiterminator, conserved site	GO:0003723|GO:0006355|GO:0045893	G3DSA:1.10.1790.10|G3DSA:2.30.24.10|PF00874|PF03123|PS00654|PS51372|PTHR30185|SM01061|SSF50151|SSF63520
bglH|bglH|AP_004067.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003192|IPR021570	LamB-type porin N-terminal domain|Porin, LamB type	GO:0006810|GO:0016020	G3DSA:2.40.170.10|PD008788|PF02264|PF11471|SSF56935
bglJ|bglJ|AP_004855.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000792|IPR011991|IPR016032	Signal transduction response regulator, C-terminal effector|Transcription regulator LuxR, C-terminal|Winged helix-turn-helix DNA-binding domain	GO:0003677|GO:0003700|GO:0005622|GO:0006355|GO:0043565	G3DSA:1.10.10.10|PF00196|PR00038|PS50043|SM00421|SSF46894
bglX|bglX|AP_002729.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001764|IPR002772|IPR017853|IPR019800|IPR026891|IPR026892	Fibronectin type III-like domain|Glycoside hydrolase family 3|Glycoside hydrolase family 3 C-terminal domain|Glycoside hydrolase, family 3, N-terminal|Glycoside hydrolase, family 3, active site|Glycoside hydrolase, superfamily	GO:0004553|GO:0005975	G3DSA:3.20.20.300|G3DSA:3.40.50.1700|PF00933|PF01915|PF14310|PR00133|PS00775|PTHR30620|PTHR30620:SF0|SSF51445|SSF52279
bioA|bioA|AP_001405.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR005814|IPR005815|IPR015421|IPR015422|IPR015424	Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA|Aminotransferase class-III|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2	GO:0003824|GO:0004015|GO:0008483|GO:0009102|GO:0030170	G3DSA:3.40.640.10|G3DSA:3.90.1150.10|MF_00834|PF00202|PIRSF000521|PS00600|PTHR11986|PTHR11986:SF8|SSF53383|TIGR00508
bioB|bioB|AP_001406.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002684|IPR006638|IPR007197|IPR010722|IPR013785|IPR024177	Aldolase-type TIM barrel|Biotin synthase|Biotin synthase/Biotin biosynthesis bifunctional protein BioAB|Biotin/thiamin synthesis-associated protein|Elongator protein 3/MiaB/NifB|Radical SAM	GO:0003824|GO:0004076|GO:0009102|GO:0051186|GO:0051536	G3DSA:3.20.20.70|MF_01694|PF04055|PF06968|PIRSF001619|PTHR22976|PTHR22976:SF1|SM00729|SM00876|SSF102114|TIGR00433
bioC|bioC|AP_001408.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR011814|IPR013216	Malonyl-CoA O-methyltransferase BioC|Methyltransferase type 11	GO:0008152|GO:0008168|GO:0009102|GO:0010340	G3DSA:3.40.50.150|PF08241|PTHR10108|PTHR10108:SF65|SSF53335|TIGR02072
bioD|bioD|AP_001409.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002586|IPR004472|IPR027417	CobQ/CobB/MinD/ParA nucleotide binding domain|Dethiobiotin synthase BioD|P-loop containing nucleoside triphosphate hydrolase	GO:0000287|GO:0004141|GO:0005524|GO:0009102	G3DSA:3.40.50.300|MF_00336|PF01656|PIRSF006755|PTHR21343|PTHR21343:SF0|SSF52540|TIGR00347
bioF|bioF|AP_001407.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001917|IPR004723|IPR004839|IPR015421|IPR015422|IPR015424|IPR022834	8-amino-7-oxononanoate synthase|8-amino-7-oxononanoate synthase/2-amino-3-ketobutyrate coenzyme A ligase|Aminotransferase, class I/classII|Aminotransferase, class-II, pyridoxal-phosphate binding site|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2	GO:0003824|GO:0008152|GO:0008710|GO:0009058|GO:0009102|GO:0016740|GO:0030170	G3DSA:3.40.640.10|G3DSA:3.90.1150.10|MF_01693|PF00155|PS00599|PTHR13693|PTHR13693:SF29|SSF53383|TIGR00858
bioH|bioH|AP_004378.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000073|IPR010076	Alpha/beta hydrolase fold-1|Pimelyl-[acyl-carrier protein] methyl ester esterase	GO:0004091|GO:0009102	G3DSA:3.40.50.1820|MF_01260|PF00561|PTHR10992|PTHR10992:SF417|SSF53474|TIGR01738
bipA|bipA|AP_003937.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000640|IPR000795|IPR004161|IPR005225|IPR006298|IPR009000|IPR009022|IPR027417	Elongation factor G, III-V domain|Elongation factor, GTP-binding domain|GTP-binding protein TypA|P-loop containing nucleoside triphosphate hydrolase|Small GTP-binding protein domain|Translation elongation factor EFG, V domain|Translation elongation factor EFTu/EF1A, domain 2|Translation elongation/initiation factor/Ribosomal, beta-barrel	GO:0003924|GO:0005525|GO:0005622	G3DSA:2.40.30.10|G3DSA:2.40.50.250|G3DSA:3.30.70.240|G3DSA:3.30.70.870|G3DSA:3.40.50.300|PF00009|PF00679|PF03144|PR00315|PS00301|PTHR23115|PTHR23115:SF14|SM00838|SSF50447|SSF52540|SSF54980|TIGR00231|TIGR01394
birA|birA|AP_003841.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003142|IPR004143|IPR004408|IPR004409|IPR008988|IPR011991|IPR013196	Biotin operon repressor, helix-turn-helix domain|Biotin protein ligase, C-terminal|Biotin--acetyl-CoA-carboxylase ligase|Biotin/lipoate A/B protein ligase|Helix-turn-helix, type 11|Transcriptional repressor, C-terminal|Winged helix-turn-helix DNA-binding domain	GO:0003824|GO:0004077|GO:0006355|GO:0006464	G3DSA:1.10.10.10|G3DSA:2.30.30.100|G3DSA:3.30.930.10|PF02237|PF03099|PF08279|PTHR12835|SSF46785|SSF50037|SSF55681|TIGR00121|TIGR00122
bisC|bisC|AP_004243.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR006655|IPR006656|IPR006657|IPR006658|IPR009010	Aspartate decarboxylase-like domain|Molybdopterin guanine dinucleotide-containing S/N-oxide reductase|Molybdopterin oxidoreductase|Molybdopterin oxidoreductase, prokaryotic, conserved site|Molydopterin dinucleotide-binding domain	GO:0009055|GO:0016491|GO:0030151|GO:0055114	G3DSA:2.40.40.20|G3DSA:3.40.228.10|G3DSA:3.40.50.740|G3DSA:3.90.55.10|PF00384|PF01568|PS00490|PS00932|PTHR11615|PTHR11615:SF19|SSF50692|SSF53706|TIGR00509
blc|blc|AP_004652.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000566|IPR002446|IPR011038|IPR012674|IPR022271|IPR022272	Calycin|Calycin-like|Lipocalin conserved site|Lipocalin, ApoD type|Lipocalin, bacterial|Lipocalin/cytosolic fatty-acid binding protein domain	GO:0005215	G3DSA:2.40.128.20|PF08212|PIRSF036893|PR01171|PS00213|PS51257|PTHR10612|PTHR10612:SF7|SSF50814
blr|blr|AP_002246.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091				
bolA|bolA|AP_001085.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002634	BolA protein		G3DSA:3.30.300.90|PF01722|PIRSF003113|PTHR12735|SSF82657
borD|borD|AP_001203.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR010438	Bor	GO:0009279	PD020173|PF06291|PS51257
brnQ|brnQ|AP_001051.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004685	Branched-chain amino acid transport system II carrier protein	GO:0015658|GO:0015803|GO:0016021	PF05525|PTHR30588|PTHR30588:SF0|TIGR00796
btuB|btuB|AP_003844.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000531|IPR010101|IPR010916|IPR010917|IPR012910	TonB box, conserved site|TonB-dependent receptor, beta-barrel|TonB-dependent receptor, conserved site|TonB-dependent receptor, plug|TonB-dependent vitamin B12 transporter BtuB	GO:0004872|GO:0005215|GO:0006810|GO:0015235|GO:0015889|GO:0016020	G3DSA:2.170.130.10|G3DSA:2.40.170.20|MF_01531|PF00593|PF07715|PS00430|PS01156|PTHR30069|PTHR30069:SF2|SSF56935|TIGR01779
btuC|btuC|AP_002331.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000522|IPR023691	ABC transporter, permease protein|ABC transporter, vitamin B12 import, permease   protein BtuC	GO:0005215|GO:0015889|GO:0016020	G3DSA:1.10.3470.10|MF_01004|PF01032|PTHR30472|PTHR30472:SF3|SSF81345
btuD|btuD|AP_002329.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003439|IPR003593|IPR017871|IPR023693|IPR027417	AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter, vitamin B12, BtuD|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase	GO:0000166|GO:0005524|GO:0015889|GO:0016887|GO:0017111	G3DSA:3.40.50.300|MF_01005|PF00005|PS00211|PS50893|PTHR24220|PTHR24220:SF73|SM00382|SSF52540
btuE|btuE|AP_002330.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000889|IPR012336	Glutathione peroxidase|Thioredoxin-like fold	GO:0004602|GO:0006979|GO:0055114	G3DSA:3.40.30.10|PF00255|PIRSF000303|PR01011|PS00460|PS00763|PS51355|PTHR11592|PTHR11592:SF0|SSF52833
btuF|btuF|AP_000819.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002491|IPR023544	ABC transporter periplasmic binding domain|ABC transporter, vitamin B12-binding protein	GO:0005488|GO:0015889|GO:0031419|GO:0042597	G3DSA:3.40.50.1980|MF_01000|PF01497|PS50983|PTHR30535|SSF53807
btuR|btuR|AP_001896.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003724|IPR025826|IPR027417	Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR|Cob(I)alamin adenosyltransferase N-terminal domain|P-loop containing nucleoside triphosphate hydrolase	GO:0005524|GO:0008817|GO:0009236	G3DSA:3.40.50.300|PF02572|PF12557|PIRSF015617|PTHR30069|PTHR30069:SF1|SSF52540|TIGR00708
cadA|cadA|AP_004633.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000310|IPR005308|IPR008286|IPR011193|IPR015421|IPR015422|IPR015424	Orn/Lys/Arg decarboxylase, C-terminal|Orn/Lys/Arg decarboxylase, N-terminal|Orn/Lys/Arg decarboxylase, major domain|Ornithine/lysine/arginine decarboxylase|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2	GO:0003824|GO:0005737|GO:0006520|GO:0016831|GO:0030170	G3DSA:3.40.640.10|G3DSA:3.90.100.10|G3DSA:3.90.1150.10|PF01276|PF03709|PF03711|PIRSF009393|PS00703|PTHR30475|PTHR30475:SF0|SSF53383|SSF55904
cadB|cadB|AP_004634.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002293|IPR004754	Amino acid antiporter|Amino acid/polyamine transporter I	GO:0003333|GO:0006865|GO:0015171|GO:0016020|GO:0016021	PF13520|PIRSF006060|PTHR11785|PTHR11785:SF127|TIGR00905
cadC|cadC|AP_004635.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001867|IPR011991|IPR016032	Signal transduction response regulator, C-terminal|Signal transduction response regulator, C-terminal effector|Winged helix-turn-helix DNA-binding domain	GO:0000156|GO:0000160|GO:0003677|GO:0006355	G3DSA:1.10.10.10|PF00486|PTHR26402|PTHR26402:SF63|SM00862|SSF46894
caiA|caiA|AP_000703.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR006089|IPR006090|IPR006091|IPR006092|IPR009075|IPR009100|IPR013786|IPR023450	Acyl-CoA dehydrogenase, N-terminal|Acyl-CoA dehydrogenase, conserved site|Acyl-CoA dehydrogenase/oxidase|Acyl-CoA dehydrogenase/oxidase C-terminal|Acyl-CoA dehydrogenase/oxidase, N-terminal|Acyl-CoA oxidase/dehydrogenase, central domain|Acyl-CoA oxidase/dehydrogenase, type 1|Crotonobetainyl-CoA dehydrogenase CaiA	GO:0003995|GO:0008152|GO:0009437|GO:0016627|GO:0050660|GO:0055114	G3DSA:1.10.540.10|G3DSA:1.20.140.10|G3DSA:2.40.110.10|MF_01052|PF00441|PF02770|PF02771|PS00072|PS00073|PTHR10909|PTHR10909:SF145|SSF47203|SSF56645
caiB|caiB|AP_000702.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003673|IPR023452|IPR023606	CoA-transferase family III|CoA-transferase family III domain|CoA-transferase family III, crotonobetainyl-CoA:carnitine CoA-transferase CaiB	GO:0003824|GO:0008152|GO:0009437|GO:0016782	G3DSA:3.30.1540.10|G3DSA:3.40.50.10540|MF_01050|PF02515|PTHR11837|SSF89796
caiC|caiC|AP_000701.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000873|IPR020845|IPR023456	AMP-binding, conserved site|AMP-dependent synthetase/ligase|Crotonobetaine/carnitine-CoA ligase CaiC	GO:0003824|GO:0008152|GO:0009437|GO:0016878|GO:0051108|GO:0051109	G3DSA:2.30.38.10|G3DSA:3.30.300.30|G3DSA:3.40.50.980|MF_01524|PF00501|PS00455|PTHR24096|PTHR24096:SF34|SSF56801
caiD|caiD|AP_000700.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001753|IPR014748|IPR018376|IPR022852	Carnitinyl-CoA dehydratase|Crontonase, C-terminal|Crotonase superfamily|Enoyl-CoA hydratase/isomerase, conserved site	GO:0003824|GO:0008152|GO:0016836	G3DSA:1.10.12.10|G3DSA:3.90.226.10|MF_01051|PF00378|PS00166|PTHR11941|SSF52096
caiE|caiE|AP_000699.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001451|IPR011004|IPR023446	Bacterial transferase hexapeptide repeat|Carnitine operon protein CaiE|Trimeric LpxA-like	GO:0016740	G3DSA:2.160.10.10|MF_01525|PF00132|PTHR22572|PTHR22572:SF49|SSF51161
caiF|caiF|AP_000698.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR020357	Transcription regulator CaiF	GO:0006351	PD081346|PF07180
caiT|caiT|AP_000704.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000060|IPR018093|IPR023449	BCCT transporter family|BCCT transporter family, L-carnitine/gamma-butyrobetaine antiporter CaiT|BCCT transporter, conserved site	GO:0005215|GO:0006810|GO:0016020|GO:0044667|GO:1900749|GO:1900751	MF_01049|PF02028|PS01303|PTHR30047|PTHR30047:SF0|TIGR00842
can|can|AP_000787.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001765|IPR015892	Carbonic anhydrase|Carbonic anhydrase, prokaryotic-like, conserved site	GO:0004089|GO:0008270|GO:0015976	G3DSA:3.40.1050.10|PF00484|PS00704|PS00705|PTHR11002|PTHR11002:SF1|SM00947|SSF53056
carA|carA|AP_000696.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002474|IPR006274|IPR017926	Carbamoyl-phosphate synthase, small subunit|Carbamoyl-phosphate synthase, small subunit N-terminal domain|Glutamine amidotransferase	GO:0006543|GO:0070409	G3DSA:3.40.50.880|G3DSA:3.50.30.20|MF_01209|PF00117|PF00988|PR00096|PR00097|PR00099|PS51273|PTHR11405|SM01097|SSF52021|SSF52317|TIGR01368
carB|carB|AP_000697.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR005479|IPR005480|IPR005481|IPR005483|IPR006275|IPR011607|IPR011761|IPR013815|IPR013816|IPR016185	ATP-grasp fold|ATP-grasp fold, subdomain 1|ATP-grasp fold, subdomain 2|Carbamoyl-phosphate synthase large subunit, CPSase domain|Carbamoyl-phosphate synthase, large subunit|Carbamoyl-phosphate synthase, large subunit, N-terminal|Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain|Carbamoyl-phosphate synthetase, large subunit oligomerisation domain|Methylglyoxal synthase-like domain|Pre-ATP-grasp domain	GO:0003824|GO:0005524|GO:0006807|GO:0008152|GO:0046872	G3DSA:1.10.1030.10|G3DSA:3.30.1490.20|G3DSA:3.30.470.20|G3DSA:3.40.50.1380|G3DSA:3.40.50.20|MF_01210_A|MF_01210_B|PF00289|PF02142|PF02786|PF02787|PR00098|PS00866|PS00867|PS50975|PS51257|PTHR11405|PTHR11405:SF5|SM00851|SM01096|SSF48108|SSF52335|SSF52440|SSF56059|TIGR01369
cbl|cbl|AP_002589.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000847|IPR005119|IPR011991	LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain	GO:0003700|GO:0006355	G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PR00039|PS50931|PTHR30530|PTHR30530:SF0|SSF46785|SSF53850
cbpA|cbpA|AP_001631.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001623|IPR002939|IPR008971|IPR018253|IPR023859	Chaperone DnaJ, C-terminal|DNA-binding protein, curved-DNA|DnaJ domain|DnaJ domain, conserved site|HSP40/DnaJ peptide-binding	GO:0006457|GO:0051082	G3DSA:1.10.287.110|G3DSA:2.60.260.20|MF_01154|PF00226|PF01556|PR00625|PS00636|PS50076|PTHR24077|PTHR24077:SF14|SM00271|SSF46565|SSF49493
cbpM|cbpM|AP_001630.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR022835	Chaperone modulatory protein CbpM		MF_01155|PF13591
cbrA|cbrA|AP_004103.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002938|IPR003042	Aromatic-ring hydroxylase-like|Monooxygenase, FAD-binding	GO:0008152|GO:0016491	G3DSA:3.50.50.60|PF01494|PR00420|PTHR10617|PTHR10617:SF6|SSF51905
cbrC|cbrC|AP_004070.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR005363	Uncharacterised protein family UPF0167		PF03691
cca|cca|AP_003606.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002646|IPR003607|IPR006674|IPR012006	HD domain|HD/PDEase domain|Poly A polymerase, head domain|tRNA nucleotidyltransferase, proteobacteria	GO:0001680|GO:0003723|GO:0003824|GO:0004810|GO:0005524|GO:0006396|GO:0008081|GO:0016779|GO:0046872	G3DSA:1.10.3090.10|G3DSA:3.30.460.10|MF_01261|MF_01262|PF01743|PF01966|PF12627|PIRSF000813|PTHR13734|PTHR13734:SF6|SM00471|SSF81301|SSF81891
cchA|cchA|AP_003042.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000249|IPR020808	Bacterial microcompartments protein, conserved site|Microcompartment protein, bacteria		PD003442|PF00936|PS01139|SM00877|SSF143414
cchB|cchB|AP_003041.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004992|IPR023414	Ethanolamine utilization protein EutN/carboxysome structural protein Ccml|Ethanolamine utilization protein-like domain		G3DSA:2.40.50.220|PF03319|SSF159133
ccmA|ccmA|AP_002797.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003439|IPR003593|IPR005895|IPR017871|IPR027417	AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter, haem export, CcmA|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase	GO:0000166|GO:0005215|GO:0005524|GO:0016887|GO:0017004|GO:0017111|GO:0030288	G3DSA:3.40.50.300|PF00005|PS00211|PS50893|PS51243|PTHR24220|PTHR24220:SF115|SM00382|SSF52540|TIGR01189
ccmB|ccmB|AP_002796.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003544|IPR026031	Cytochrome c-type biogenesis protein CcmB|Cytochrome c-type biogenesis protein CcmB, bacteria	GO:0015232|GO:0015886|GO:0016020|GO:0017004	PF03379|PIRSF002764|PR01414|PTHR30070|PTHR30070:SF0|TIGR01190
ccmC|ccmC|AP_002795.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002541|IPR003557	Cytochrome c assembly protein|Cytochrome c-type biogenesis protein CcmC	GO:0006461|GO:0008535|GO:0015232|GO:0015886|GO:0016020|GO:0017004	PF01578|PR01386|PTHR30071|PTHR30071:SF0|TIGR01191
ccmD|ccmD|AP_002794.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR007078	Haem exporter protein D (CcmD)	GO:0015886|GO:0016021|GO:0017004	PF04995|TIGR03141
ccmE|ccmE|AP_002793.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004329|IPR012340	CcmE/CycJ protein|Nucleic acid-binding, OB-fold	GO:0005886|GO:0017003|GO:0017004	G3DSA:2.40.50.140|MF_01959|PF03100|SSF82093
ccmF|ccmF|AP_002792.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002541|IPR003567|IPR003568	Cytochrome c assembly protein|Cytochrome c-type biogenesis protein|Cytochrome c-type biogenesis protein CcmF	GO:0006461|GO:0008535|GO:0015232|GO:0015886|GO:0016020|GO:0017004	PF01578|PR01410|PR01411|PTHR30009|PTHR30009:SF0|TIGR00353
ccmG|ccmG|AP_002791.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004799|IPR012336|IPR013740|IPR017937	Periplasmic protein thiol:disulphide oxidoreductase DsbE|Redoxin|Thioredoxin, conserved site|Thioredoxin-like fold	GO:0015036|GO:0016491|GO:0017004|GO:0030288|GO:0045454	G3DSA:3.40.30.10|PF08534|PS00194|PS51352|PTHR30233|SSF52833|TIGR00385
ccmH|ccmH|AP_002790.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR005616|IPR011990|IPR013026|IPR019734	Cytochrome C biogenesis protein CcmH|Tetratricopeptide repeat|Tetratricopeptide repeat-containing domain|Tetratricopeptide-like helical	GO:0005515	G3DSA:1.25.40.10|PF03918|PS50005|PS50293|PTHR23083|PTHR23083:SF231|SSF48452
cdaR|cdaR|AP_000823.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR008599|IPR025736	PucR C-terminal helix-turn-helix domain|Putative sugar diacid recognition		PF05651|PF13556
cdd|cdd|AP_002740.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002125|IPR006263|IPR013171|IPR016192|IPR016193|IPR020797	APOBEC/CMP deaminase, zinc-binding|CMP/dCMP deaminase, zinc-binding|Cytidine deaminase, bacteria|Cytidine deaminase, homodimeric|Cytidine deaminase-like|Cytidine/deoxycytidylate deaminase, zinc-binding domain	GO:0003824|GO:0004126|GO:0008270|GO:0009972|GO:0016787	G3DSA:3.40.140.10|MF_01558|PF00383|PF08211|PIRSF006334|PS00903|PTHR11644|PTHR11644:SF12|SSF53927|TIGR01355
cdh|cdh|AP_003891.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003763|IPR011146|IPR015993	CDP-diacylglycerol pyrophosphatase|CDP-diacylglycerol pyrophosphatase, proteobacterial|HIT-like domain	GO:0003824|GO:0008654|GO:0008715|GO:0016020	G3DSA:3.30.428.30|MF_00319|PF02611|PIRSF001273|SSF54197|TIGR00672
cdsA|cdsA|AP_000835.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000374	Phosphatidate cytidylyltransferase	GO:0016020|GO:0016772	PF01148|PS01315|PTHR13773|PTHR13773:SF0
cedA|cedA|AP_002350.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR019666	Cell division activator CedA	GO:0003677|GO:0051301	MF_01580|PF10729
cfa|cfa|AP_002283.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003333	Mycolic acid cyclopropane synthase	GO:0008610	G3DSA:3.40.50.150|PF02353|PIRSF003085|PTHR10108|PTHR10108:SF227|SSF53335
chaA|chaA|AP_001844.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004713|IPR004837	Calcium/proton exchanger|Sodium/calcium exchanger membrane region	GO:0006812|GO:0008324|GO:0016021|GO:0055085	PF01699|PTHR30102|PTHR30102:SF0|TIGR00846
chaB|chaB|AP_001845.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR009317	ChaB		PF06150|SSF140376
chaC|chaC|AP_001846.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR006840|IPR013024	Butirosin biosynthesis, BtrG-like|ChaC-like protein		G3DSA:3.10.490.10|PF04752|PTHR12192|PTHR12192:SF0|SSF110857
chbA|chbA|AP_002355.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003188	Phosphotransferase system, lactose/cellobiose-specific IIA subunit	GO:0005351|GO:0006810|GO:0009401|GO:0016020	G3DSA:1.20.58.80|PF02255|PIRSF000699|PS51095|SSF46973|TIGR00823
chbB|chbB|AP_002357.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003501|IPR013012	Phosphotransferase system, EIIB component, type 2/3|Phosphotransferase system, EIIB component, type 3	GO:0008982|GO:0009401	G3DSA:3.40.50.270|PF02302|PS51100|SSF52794|TIGR00853
chbC|chbC|AP_002356.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003352|IPR004501|IPR004796	Phosphotransferase system, EIIC|Phosphotransferase system, cellobiose-specific IIC component|Phosphotransferase system, lactose/cellobiose IIC component	GO:0005351|GO:0008982|GO:0009401|GO:0016020|GO:0016021	PF02378|PIRSF006351|PS51105|PTHR30240|PTHR30240:SF0|TIGR00359|TIGR00410
chbF|chbF|AP_002353.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001088|IPR015955|IPR016040|IPR019802|IPR022616	Glycoside hydrolase, family 4|Glycoside hydrolase, family 4, conserved site|Glycosyl hydrolase, family 4, C-terminal|Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal|NAD(P)-binding domain	GO:0003824|GO:0004553|GO:0005975|GO:0016616|GO:0055114	G3DSA:3.40.50.720|G3DSA:3.90.110.10|PF02056|PF11975|PR00732|PS01324|PTHR32092|PTHR32092:SF0|SSF51735|SSF56327
chbG|chbG|AP_002352.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002509|IPR006879|IPR011330|IPR022948	Glycoside hydrolase/deacetylase, beta/alpha-barrel|Polysaccharide deacetylase|Uncharacterised protein family UPF0249|Uncharacterised protein family UPF0249/HpnK	GO:0003824|GO:0005975|GO:0016810	G3DSA:3.20.20.370|MF_01246|PF04794|PTHR31609|PTHR31609:SF0|SSF88713
chbR|chbR|AP_002354.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR009057|IPR011051|IPR013096|IPR014710|IPR018060|IPR018062|IPR020449	Cupin 2, conserved barrel|DNA binding HTH domain, AraC-type|HTH domain AraC-type, conserved site|Homeodomain-like|RmlC-like cupin domain|RmlC-like jelly roll fold|Transcription regulator HTH, AraC- type	GO:0003677|GO:0003700|GO:0005622|GO:0006355|GO:0043565	G3DSA:1.10.10.60|G3DSA:2.60.120.10|PF00165|PF07883|PR00032|PS00041|PS01124|PTHR11019|SM00342|SSF46689|SSF51182
cheA|cheA|AP_002508.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002545|IPR003594|IPR004105|IPR004358|IPR005467|IPR008207|IPR009082|IPR015162	CheW-like protein|CheY binding|Histidine kinase-like ATPase, ATP-binding domain|Signal transduction histidine kinase, core|Signal transduction histidine kinase, homodimeric domain|Signal transduction histidine kinase, phosphotransfer (Hpt) domain|Signal transduction histidine kinase, subgroup, homodimeric|Signal transduction histidine kinase-related protein, C-terminal	GO:0000155|GO:0000160|GO:0004673|GO:0004871|GO:0005524|GO:0005622|GO:0005737|GO:0006935|GO:0007165|GO:0016310|GO:0016772	G3DSA:1.10.287.560|G3DSA:1.20.120.160|G3DSA:2.30.30.40|G3DSA:2.40.50.180|G3DSA:3.30.565.10|G3DSA:3.30.70.400|PF01584|PF01627|PF02518|PF02895|PF09078|PR00344|PS50109|PS50851|PS50894|PTHR22617|PTHR22617:SF6|SM00073|SM00260|SM00387|SSF47226|SSF47384|SSF50341|SSF55052|SSF55874
cheB|cheB|AP_002503.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000673|IPR001789|IPR008248|IPR011006	CheY-like superfamily|Signal transduction response regulator, chemotaxis, CheB|Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase|Signal transduction response regulator, receiver domain	GO:0000156|GO:0000160|GO:0005737|GO:0006355|GO:0006935|GO:0008984	G3DSA:3.40.50.180|G3DSA:3.40.50.2300|MF_00099|PF00072|PF01339|PIRSF000876|PS50110|PS50122|PTHR24421|PTHR24421:SF4|SM00448|SSF52172|SSF52738
cheR|cheR|AP_002504.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000780|IPR022641|IPR022642|IPR026024	Chemotaxis protein methyltransferase CheR|MCP methyltransferase, CheR-type|MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal|MCP methyltransferase, CheR-type, all-alpha domain, N-terminal	GO:0008757	G3DSA:1.10.155.10|G3DSA:3.40.50.150|PF01739|PF03705|PIRSF000410|PR00996|PS50123|PTHR24422|PTHR24422:SF2|SM00138|SSF47757|SSF53335
cheW|cheW|AP_002507.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002545	CheW-like protein	GO:0004871|GO:0005622|GO:0006935|GO:0007165	G3DSA:2.30.30.40|G3DSA:2.40.50.180|PF01584|PS50851|SM00260|SSF50341
cheY|cheY|AP_002502.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001789|IPR011006	CheY-like superfamily|Signal transduction response regulator, receiver domain	GO:0000156|GO:0000160|GO:0006355	G3DSA:3.40.50.2300|PF00072|PS50110|PTHR26402|PTHR26402:SF107|SM00448|SSF52172
cheZ|cheZ|AP_002501.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR007439	Chemotaxis phosphatase, CheZ	GO:0003824|GO:0009288|GO:0050920	G3DSA:1.10.287.500|G3DSA:1.20.5.590|PF04344|PIRSF002884|SSF75708
chiA|chiA|AP_004452.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003610|IPR013781|IPR017853	Carbohydrate-binding module family 5/12|Glycoside hydrolase, catalytic domain|Glycoside hydrolase, superfamily	GO:0003824|GO:0004553|GO:0005576|GO:0005975|GO:0030246	G3DSA:2.10.10.20|G3DSA:3.20.20.80|PF02839|PTHR11177|PTHR11177:SF20|SM00495|SSF51055|SSF51445
chpA|chpA|AP_003348.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003477|IPR011067	Plasmid maintenance toxin/Cell growth inhibitor|mRNA interferase PemK-like protein	GO:0003677	G3DSA:2.30.30.110|PF02452|SSF50118
chpB|chpB|AP_004725.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003477|IPR011067	Plasmid maintenance toxin/Cell growth inhibitor|mRNA interferase PemK-like protein	GO:0003677	G3DSA:2.30.30.110|PF02452|SSF50118
chpR|chpR|AP_003349.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR007159	AbrB-like domain		G3DSA:2.10.260.10|PF04014|SM00966|SSF89447
chpS|chpS|AP_004724.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR007159	AbrB-like domain		G3DSA:2.10.260.10|PF04014|SM00966|SSF89447
cirA|cirA|AP_002752.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000531|IPR010916|IPR010917|IPR012910	TonB box, conserved site|TonB-dependent receptor, beta-barrel|TonB-dependent receptor, conserved site|TonB-dependent receptor, plug	GO:0004872|GO:0005215|GO:0006810|GO:0016020	G3DSA:2.170.130.10|G3DSA:2.40.170.20|PF00593|PF07715|PS00430|PS01156|PTHR30069|PTHR30069:SF2|SSF56935
citA|citA|AP_001266.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000014|IPR003594|IPR004358|IPR005467|IPR009082|IPR016120	Histidine kinase-like ATPase, ATP-binding domain|PAS domain|Signal transduction histidine kinase, core|Signal transduction histidine kinase, homodimeric domain|Signal transduction histidine kinase, sporulation regulator SpoOB|Signal transduction histidine kinase-related protein, C-terminal	GO:0000155|GO:0000160|GO:0004871|GO:0005524|GO:0007165|GO:0016310|GO:0016772	G3DSA:1.10.287.130|G3DSA:3.30.450.20|G3DSA:3.30.565.10|PF02518|PF13188|PR00344|PS50109|PTHR24423|PTHR24423:SF82|SM00091|SM00387|SSF103190|SSF55785|SSF55874|SSF55890
citB|citB|AP_001267.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001789|IPR011006|IPR024187	CheY-like superfamily|Signal transduction response regulator, citrate/malate metabolism|Signal transduction response regulator, receiver domain	GO:0000156|GO:0000160|GO:0001071|GO:0003677|GO:0005737|GO:0006355|GO:0009605	G3DSA:3.40.50.2300|PF00072|PF12431|PIRSF006171|PS50110|PTHR26402|PTHR26402:SF76|SM00448|SSF52172
citC|citC|AP_001265.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000182|IPR004821|IPR005216|IPR013166|IPR014729|IPR016181	Acyl-CoA N-acyltransferase|Citrate lyase ligase|Citrate lyase ligase, C-terminal|Cytidyltransferase-like domain|GNAT domain|Rossmann-like alpha/beta/alpha sandwich fold	GO:0003824|GO:0008080|GO:0008771|GO:0009058	G3DSA:3.40.50.620|G3DSA:3.40.630.30|PD016147|PF08218|PIRSF005751|PS51186|SM00764|SSF52374|SSF55729|TIGR00124|TIGR00125
citD|citD|AP_001264.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR006495|IPR023439	Citrate lyase acyl carrier protein CitD|Malonate decarboxylase/citrate lyase acyl carrier protein	GO:0005737	MF_00805|PD015389|PF06857|PIRSF002736|TIGR01608
citE|citE|AP_001263.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR005000|IPR006475|IPR011206|IPR015813	Aldehyde-lyase domain|Citrate lyase, beta subunit|Citrate lyase, beta subunit, bacteria|Pyruvate/Phosphoenolpyruvate kinase-like domain	GO:0003824|GO:0005737|GO:0006084|GO:0006725|GO:0008815|GO:0008816|GO:0009346|GO:0016830	G3DSA:3.20.20.60|PF03328|PIRSF015582|PTHR32308|SSF51621|TIGR01588
citF|citF|AP_001262.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR006472	Citrate lyase, alpha subunit	GO:0005737|GO:0006084|GO:0008814|GO:0009346	G3DSA:3.40.1080.10|G3DSA:3.40.810.20|PF04223|PIRSF009451|SSF100950|TIGR01584
citG|citG|AP_001260.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002736|IPR017551	Triphosphoribosyl-dephospho-CoA protein|Triphosphoribosyl-dephospho-CoA synthase CitG	GO:0005524|GO:0016310|GO:0046917	MF_00397|PF01874|PTHR30201|TIGR03125
citT|citT|AP_001259.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001898	Sodium/sulphate symporter	GO:0005215|GO:0006814|GO:0016020|GO:0055085	PF00939|PTHR10283|PTHR10283:SF13|TIGR00785
citX|citX|AP_001261.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR005551	Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase	GO:0051191	MF_00398|PF03802|TIGR03124
clcA|clcA|AP_000816.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001807|IPR014743|IPR023861	Chloride channel, ClcA|Chloride channel, core|Chloride channel, voltage gated	GO:0005216|GO:0005247|GO:0005887|GO:0006821|GO:0015108|GO:0016020|GO:0055085	G3DSA:1.10.3080.10|MF_01128|PF00654|PR00762|PTHR11689|PTHR11689:SF14|SSF81340
clcB|clcB|AP_002213.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001807|IPR014743	Chloride channel, core|Chloride channel, voltage gated	GO:0005216|GO:0005247|GO:0006821|GO:0016020|GO:0055085	G3DSA:1.10.3080.10|PF00654|PR00762|PTHR11689|PTHR11689:SF14|SSF81340
cld|cld|AP_002628.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003856	Lipopolysaccharide biosynthesis	GO:0009103|GO:0016020	G3DSA:3.30.1890.10|PF02706|SSF160355
clpA|clpA|AP_001513.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001270|IPR003593|IPR003959|IPR004176|IPR013093|IPR013461|IPR018368|IPR019489|IPR023150|IPR027417	AAA+ ATPase domain|ATP-dependent Clp protease ATP-binding subunit ClpA|ATPase, AAA-2|ATPase, AAA-type, core|Chaperonin ClpA/B|Chaperonin ClpA/B, conserved site|Clp ATPase, C-terminal|Clp, N-terminal|Double Clp-N motif|P-loop containing nucleoside triphosphate hydrolase	GO:0000166|GO:0004176|GO:0005524|GO:0017111|GO:0019538	G3DSA:1.10.1780.10|G3DSA:1.10.8.60|G3DSA:3.40.50.300|PF00004|PF02861|PF07724|PF10431|PR00300|PS00870|PS00871|PTHR11638|PTHR11638:SF14|SM00382|SM01086|SSF52540|SSF81923|TIGR02639
clpB|clpB|AP_003174.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001270|IPR003593|IPR003959|IPR004176|IPR013093|IPR017730|IPR018368|IPR019489|IPR023150|IPR027417	AAA+ ATPase domain|ATPase, AAA-2|ATPase, AAA-type, core|Chaperonin ClpA/B|Chaperonin ClpA/B, conserved site|Chaperonin ClpB|Clp ATPase, C-terminal|Clp, N-terminal|Double Clp-N motif|P-loop containing nucleoside triphosphate hydrolase	GO:0000166|GO:0005524|GO:0005737|GO:0009408|GO:0016485|GO:0017111|GO:0019538	G3DSA:1.10.1780.10|G3DSA:1.10.8.60|G3DSA:3.40.50.300|PF00004|PF02861|PF07724|PF10431|PR00300|PS00870|PS00871|PTHR11638|PTHR11638:SF18|SM00382|SM01086|SSF52540|SSF81923|TIGR03346
clpP|clpP|AP_001087.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001907|IPR018215|IPR023562	Clp protease proteolytic subunit /Translocation-enhancing protein TepA|ClpP|ClpP, active site	GO:0004252|GO:0006508	G3DSA:3.90.226.10|MF_00444|PF00574|PR00127|PS00381|PS00382|PTHR10381|SSF52096|TIGR00493
clpS|clpS|AP_001512.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003769|IPR014719|IPR022935	ATP-dependent Clp protease adaptor protein ClpS|Adaptor protein ClpS, core|Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like	GO:0030163	G3DSA:3.30.1390.10|MF_00302|PF02617|SSF54736
clpX|clpX|AP_001088.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003593|IPR004487|IPR010603|IPR013093|IPR019489|IPR027417	AAA+ ATPase domain|ATPase, AAA-2|Clp ATPase, C-terminal|Clp protease, ATP-binding subunit ClpX|P-loop containing nucleoside triphosphate hydrolase|Zinc finger, ClpX C4-type	GO:0000166|GO:0005524|GO:0006457|GO:0008270|GO:0017111|GO:0046983|GO:0051082	G3DSA:1.10.8.60|G3DSA:3.40.50.300|MF_00175|PF06689|PF07724|PF10431|PTHR11262|PTHR11262:SF4|SM00382|SM00994|SM01086|SSF52540|SSF57716|TIGR00382
cls|cls|AP_001875.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001736|IPR022924|IPR027379	Cardiolipin synthase|Cardiolipin synthase N-terminal|Phospholipase D/Transphosphatidylase	GO:0003824|GO:0008152|GO:0008808|GO:0016780|GO:0032049	G3DSA:3.30.870.10|MF_00190|PF00614|PF13396|PS50035|PTHR21248|PTHR21248:SF0|SM00155|SSF56024|TIGR04265
cmk|cmk|AP_001540.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003136|IPR011994|IPR027417	Cytidylate kinase|Cytidylate kinase domain|P-loop containing nucleoside triphosphate hydrolase	GO:0004127|GO:0005524|GO:0006139	G3DSA:3.40.50.300|PF02224|PTHR21299|PTHR21299:SF2|SSF52540|TIGR00017
cmr|cmr|AP_001473.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR005829|IPR011701|IPR016196|IPR020846	Major facilitator superfamily|Major facilitator superfamily domain|Major facilitator superfamily domain, general substrate transporter|Sugar transporter, conserved site	GO:0005215|GO:0006810|GO:0016020|GO:0016021|GO:0055085	G3DSA:1.20.1250.20|PF07690|PS00216|PS50850|PTHR24003|SSF103473
cmtA|cmtA|AP_003490.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003352|IPR003501|IPR004718|IPR013011|IPR013014	Phosphotransferase system, EIIB component, type 2|Phosphotransferase system, EIIB component, type 2/3|Phosphotransferase system, EIIC|Phosphotransferase system, EIIC component, type 2|Phosphotransferase system, mannitol-specific enzyme IIC	GO:0005351|GO:0008982|GO:0009401|GO:0016020|GO:0016021	G3DSA:3.40.50.10370|PF02302|PF02378|PS51099|PS51104|PTHR30181|PTHR30181:SF0|SSF52794|TIGR00851
cmtB|cmtB|AP_003491.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002178|IPR016152	Phosphotransferase system, phosphoenolpyruvate-dependent sugar EIIA 2|Phosphotransferase/anion transporter	GO:0005215|GO:0005351|GO:0006810|GO:0009401	G3DSA:3.40.930.10|PF00359|PS00372|PS51094|SSF55804
coaA|coaA|AP_003840.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004566|IPR006083|IPR027417	Bacterial pantothenate kinase|P-loop containing nucleoside triphosphate hydrolase|Phosphoribulokinase/uridine kinase	GO:0004594|GO:0005524|GO:0005737|GO:0008152|GO:0015937|GO:0016301	G3DSA:3.40.50.300|MF_00215|PF00485|PIRSF000545|PTHR10285|PTHR10285:SF7|SSF52540|TIGR00554
coaD|coaD|AP_004157.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001980|IPR004821|IPR014729	Coenzyme A biosynthesis protein|Cytidyltransferase-like domain|Rossmann-like alpha/beta/alpha sandwich fold	GO:0003824|GO:0004595|GO:0009058|GO:0015937	G3DSA:3.40.50.620|MF_00151|PD016147|PF01467|PR01020|PTHR21342|PTHR21342:SF0|SSF52374|TIGR00125|TIGR01510
coaE|coaE|AP_000765.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001977|IPR027417	Dephospho-CoA kinase|P-loop containing nucleoside triphosphate hydrolase	GO:0004140|GO:0005524|GO:0015937	G3DSA:3.40.50.300|MF_00376|PF01121|PS51219|PTHR10695|SSF52540|TIGR00152
cobB|cobB|AP_001746.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003000|IPR026590|IPR026591|IPR027546	Sirtuin family|Sirtuin family, catalytic core domain|Sirtuin family, catalytic core small domain|Sirtuin, classIII	GO:0036054|GO:0036055|GO:0070403	G3DSA:3.30.1600.10|G3DSA:3.40.50.1220|MF_01121|PF02146|PS50305|PTHR11085|SSF52467
cobC|cobC|AP_001287.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001345|IPR013078|IPR017578	Alpha-ribazole phosphatase, CobC|Histidine phosphatase superfamily, clade-1|Phosphoglycerate/bisphosphoglycerate mutase, active site	GO:0003824|GO:0008152|GO:0009236|GO:0043755	G3DSA:3.40.50.1240|PF00300|PS00175|PTHR23029|SM00855|SSF53254|TIGR03162
cobS|cobS|AP_002593.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003805	Cobalamin (vitamin B12) biosynthesis CobS, cobalamin-5-phosphate synthase	GO:0008818|GO:0009236	MF_00719|PF02654|TIGR00317
cobT|cobT|AP_002592.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003200|IPR017846|IPR023195	Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, N-terminal|Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic|Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like	GO:0008939|GO:0009163|GO:0009236	G3DSA:1.10.1610.10|G3DSA:3.40.50.10210|PF02277|PTHR21712|PTHR21712:SF4|SSF52733|TIGR03160
cobU|cobU|AP_002594.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003203|IPR027417	Cobinamide kinase/cobinamide phosphate guanyltransferase|P-loop containing nucleoside triphosphate hydrolase	GO:0000166|GO:0009236|GO:0043752|GO:0051188	G3DSA:3.40.50.300|PF02283|PIRSF006135|SSF52540
codA|codA|AP_000989.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR011059|IPR013108	Amidohydrolase 3|Metal-dependent hydrolase, composite domain	GO:0016810	G3DSA:2.30.40.10|G3DSA:3.20.20.140|PF07969|PTHR32027|PTHR32027:SF0|SSF51338|SSF51556
codB|codB|AP_000988.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001248	Permease, cytosine/purines, uracil, thiamine, allantoin	GO:0015205|GO:0015851|GO:0016020	PF02133|PTHR30569
cof|cof|AP_001096.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000150|IPR006379|IPR023214|IPR023938	Cof protein|HAD-like domain|HAD-superfamily hydrolase, subfamily IIB|HMP-PP phosphatase	GO:0003824|GO:0008152|GO:0016787|GO:0016818	G3DSA:3.30.1240.10|G3DSA:3.40.50.1000|MF_01847|PF08282|PS01228|PS01229|PTHR10000|PTHR10000:SF0|SSF56784|TIGR00099|TIGR01484
copA|copA|AP_001133.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001757|IPR006121|IPR008250|IPR023214|IPR023299|IPR027256	Cation-transporting P-type ATPase|Cation-transporting P-type ATPase, subfamily IB|HAD-like domain|Heavy metal-associated domain, HMA|P-type ATPase, A  domain|P-type ATPase, cytoplasmic domain N	GO:0000166|GO:0006812|GO:0016021|GO:0019829|GO:0030001|GO:0046872	G3DSA:2.70.150.10|G3DSA:3.30.70.100|G3DSA:3.40.1110.10|G3DSA:3.40.50.1000|PF00122|PF00403|PF00702|PR00119|PR00120|PTHR24093|PTHR24093:SF55|SSF55008|SSF56784|SSF81653|SSF81665|TIGR01494|TIGR01511|TIGR01525
corA|corA|AP_003984.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002523|IPR004488	Magnesium/cobalt transport protein CorA|Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB	GO:0006824|GO:0015087|GO:0015095|GO:0015693|GO:0016020|GO:0030001|GO:0046873|GO:0055085	G3DSA:1.20.58.340|PF01544|PTHR21535|PTHR21535:SF1|SSF143865|SSF144083|TIGR00383
cpdA|cpdA|AP_003582.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004843|IPR013622|IPR026575	3,5-cyclic adenosine monophosphate phosphodiesterase CpdA|Calcineurin-like phosphoesterase C-terminal|Metallophosphoesterase domain	GO:0004115|GO:0016787	G3DSA:3.60.21.10|MF_00905|PD587589|PF00149|SSF56300
cpdB|cpdB|AP_004713.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004843|IPR006146|IPR006179|IPR006294|IPR008334	2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase|5'-Nucleotidase, C-terminal|5'-Nucleotidase, conserved site|5'-Nucleotidase/apyrase|Metallophosphoesterase domain	GO:0000166|GO:0008663|GO:0009117|GO:0009166|GO:0016787|GO:0016788|GO:0046872	G3DSA:3.60.21.10|G3DSA:3.90.780.10|PF00149|PF02872|PR01607|PS00785|PS00786|PTHR11575|PTHR11575:SF6|SSF55816|SSF56300|TIGR01390
cpsB|cpsB|AP_002649.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001538|IPR005835|IPR006375|IPR011051|IPR014710	Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase|Mannose-6-phosphate isomerase, type II, C-terminal|Nucleotidyl transferase|RmlC-like cupin domain|RmlC-like jelly roll fold	GO:0000271|GO:0005976|GO:0009058|GO:0016779	G3DSA:2.60.120.10|G3DSA:3.90.550.10|PF00483|PF01050|PTHR12526|PTHR12526:SF1|SSF51182|SSF53448|TIGR01479
cpsG|cpsG|AP_002648.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR005841|IPR005843|IPR005844|IPR005845|IPR005846|IPR016055|IPR016066	Alpha-D-phosphohexomutase superfamily|Alpha-D-phosphohexomutase, C-terminal|Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III|Alpha-D-phosphohexomutase, alpha/beta/alpha domain I|Alpha-D-phosphohexomutase, alpha/beta/alpha domain II|Alpha-D-phosphohexomutase, alpha/beta/alpha domain III|Alpha-D-phosphohexomutase, conserved site	GO:0000287|GO:0005975|GO:0016868	G3DSA:3.30.310.50|G3DSA:3.40.120.10|PF00408|PF02878|PF02879|PF02880|PR00509|PS00710|PTHR22573|PTHR22573:SF6|SSF53738|SSF55957
cpxA|cpxA|AP_003897.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003594|IPR003660|IPR003661|IPR004358|IPR005467|IPR009082	HAMP linker domain|Histidine kinase-like ATPase, ATP-binding domain|Signal transduction histidine kinase, core|Signal transduction histidine kinase, homodimeric domain|Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal	GO:0000155|GO:0004871|GO:0005524|GO:0007165|GO:0016020|GO:0016021|GO:0016310|GO:0016772	G3DSA:1.10.287.130|G3DSA:3.30.565.10|PF00512|PF00672|PF02518|PR00344|PS50109|PS50885|PTHR24423|SM00304|SM00387|SM00388|SSF47384|SSF55874
cpxP|cpxP|AP_003895.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR012899	LTXXQ motif family protein	GO:0042597	PF07813|PIRSF034445
cpxR|cpxR|AP_003896.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001789|IPR001867|IPR011006|IPR011991	CheY-like superfamily|Signal transduction response regulator, C-terminal|Signal transduction response regulator, receiver domain|Winged helix-turn-helix DNA-binding domain	GO:0000156|GO:0000160|GO:0003677|GO:0006355	G3DSA:1.10.10.10|G3DSA:3.40.50.2300|PF00072|PF00486|PS50110|PTHR26402|PTHR26402:SF63|SM00448|SM00862|SSF52172
crcA|crcA|AP_001271.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR009746|IPR011250	Antimicrobial peptide resistance/lipid A acylation PagP|Outer membrane protein/outer membrane enzyme PagP , beta-barrel	GO:0009279|GO:0016021	G3DSA:2.40.160.20|MF_00837|PD103779|PF07017|SSF56925
crcB|crcB|AP_001273.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003691	CrcB homologue	GO:0016020	MF_00454|PF02537|TIGR00494
creA|creA|AP_004885.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR010292	Uncharacterised protein family CreA		PF05981|PIRSF003174|PTHR30630|PTHR30630:SF0
creB|creB|AP_004886.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001789|IPR001867|IPR011006|IPR011991|IPR016032	CheY-like superfamily|Signal transduction response regulator, C-terminal|Signal transduction response regulator, C-terminal effector|Signal transduction response regulator, receiver domain|Winged helix-turn-helix DNA-binding domain	GO:0000156|GO:0000160|GO:0003677|GO:0006355	G3DSA:1.10.10.10|G3DSA:3.40.50.2300|PF00072|PF00486|PS50110|PTHR26402|PTHR26402:SF117|SM00448|SM00862|SSF46894|SSF52172
creC|creC|AP_004887.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003594|IPR003660|IPR003661|IPR004358|IPR005467|IPR009082	HAMP linker domain|Histidine kinase-like ATPase, ATP-binding domain|Signal transduction histidine kinase, core|Signal transduction histidine kinase, homodimeric domain|Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal	GO:0000155|GO:0004871|GO:0005524|GO:0007165|GO:0016020|GO:0016021|GO:0016310|GO:0016772	G3DSA:1.10.287.130|G3DSA:3.30.565.10|PF00512|PF00672|PF02518|PR00344|PS50109|PS50885|PTHR24423|PTHR24423:SF173|SM00304|SM00387|SM00388|SSF103190|SSF47384|SSF55874
creD|creD|AP_004888.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR010364	Uncharacterised protein family, inner membrane CreD		PF06123|PIRSF004548|PTHR30092
crl|crl|AP_000893.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR009986	Sigma factor-binding protein Crl	GO:0005737|GO:0016987|GO:0045893	MF_01178|PF07417
crp|crp|AP_004432.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000595|IPR001808|IPR011991|IPR012318|IPR014710|IPR018335|IPR018488|IPR018490	Cyclic nucleotide-binding domain|Cyclic nucleotide-binding, conserved site|Cyclic nucleotide-binding-like|Helix-turn-helix motif, Crp-type|RmlC-like jelly roll fold|Transcription regulator HTH, Crp|Transcription regulator HTH, Crp-type, conserved site|Winged helix-turn-helix DNA-binding domain	GO:0003677|GO:0003700|GO:0005622|GO:0006355	G3DSA:1.10.10.10|G3DSA:2.60.120.10|PF00027|PF00325|PR00034|PS00042|PS00888|PS00889|PS50042|PS51063|PTHR24567|PTHR24567:SF13|SM00100|SM00419|SSF46785|SSF51206
crr|crr|AP_003011.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001127|IPR011055	Duplicated hybrid motif|Phosphotransferase system, sugar-specific permease EIIA 1 domain	GO:0005351|GO:0006810|GO:0009401|GO:0016020	G3DSA:2.70.70.10|PF00358|PS00371|PS51093|SSF51261|TIGR00830
csdA|csdA|AP_003376.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000192|IPR015421|IPR015422|IPR015424|IPR020578|IPR022471	Aminotransferase class-V pyridoxal-phosphate binding site|Aminotransferase, class V/Cysteine desulfurase|Cysteine desulphurase, catalytic subunit, CsdA|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2	GO:0003824|GO:0008152|GO:0016226|GO:0030170|GO:0031071	G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF00266|PS00595|PTHR11601|SSF53383|TIGR03392
csgA|csgA|AP_001667.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR009742	Curlin associated	GO:0007155|GO:0009289	PF07012
csgB|csgB|AP_001666.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR009742	Curlin associated	GO:0007155|GO:0009289	PF07012
csgC|csgC|AP_001668.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR014491	Curli production protein CsgC		PF10610|PIRSF018100
csgD|csgD|AP_001665.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000792|IPR011991|IPR016032	Signal transduction response regulator, C-terminal effector|Transcription regulator LuxR, C-terminal|Winged helix-turn-helix DNA-binding domain	GO:0003677|GO:0003700|GO:0005622|GO:0006355|GO:0043565	G3DSA:1.10.10.10|PF00196|PR00038|PS00622|PS50043|SM00421|SSF46894
csgE|csgE|AP_001664.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR018900	Curli assembly protein CsgE		PF10627
csgF|csgF|AP_001663.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR018893	Type VIII secretion system, CsgF		PF10614
csgG|csgG|AP_001662.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR005534	Curli production assembly/transport component CsgG	GO:0030288	PF03783|PS51257
csiE|csiE|AP_003121.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR011608	PRD	GO:0006355	G3DSA:1.10.1790.10|PF00874|PS51372|SSF63520
csiR|csiR|AP_003237.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000524|IPR008920|IPR011711|IPR011991|IPR027376	FadR/GntR C-terminal domain|Fatty acid responsive transcription factor FadR, C-terminal|GntR, C-terminal|Transcription regulator HTH, GntR|Winged helix-turn-helix DNA-binding domain	GO:0000062|GO:0003677|GO:0003700|GO:0005622|GO:0006355|GO:0019217	G3DSA:1.10.10.10|G3DSA:1.20.120.530|PF00392|PF07729|PTHR11751|PTHR11751:SF169|SM00345|SM00895|SSF46785|SSF48008
cspA|cspA|AP_004238.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002059|IPR011129|IPR012156|IPR012340|IPR019844	Cold shock protein|Cold shock, CspA|Cold-shock conserved site|Cold-shock protein, DNA-binding|Nucleic acid-binding, OB-fold	GO:0003676|GO:0003677|GO:0006355	G3DSA:2.40.50.140|PF00313|PIRSF002599|PR00050|PS00352|PTHR11544|SM00357|SSF50249
cspB|cspB|AP_002179.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002059|IPR011129|IPR012156|IPR012340|IPR019844	Cold shock protein|Cold shock, CspA|Cold-shock conserved site|Cold-shock protein, DNA-binding|Nucleic acid-binding, OB-fold	GO:0003676|GO:0003677|GO:0006355	G3DSA:2.40.50.140|PF00313|PIRSF002599|PR00050|PS00352|PTHR11544|SM00357|SSF50249
cspC|cspC|AP_002442.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002059|IPR011129|IPR012156|IPR012340|IPR019844	Cold shock protein|Cold shock, CspA|Cold-shock conserved site|Cold-shock protein, DNA-binding|Nucleic acid-binding, OB-fold	GO:0003676|GO:0003677|GO:0006355	G3DSA:2.40.50.140|PF00313|PIRSF002599|PR00050|PS00352|PTHR11544|SM00357|SSF50249
cspD|cspD|AP_001511.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002059|IPR011129|IPR012156|IPR012340|IPR012751|IPR019844	Cold shock protein|Cold shock, CspA|Cold-shock conserved site|Cold-shock protein, DNA-binding|CspD, cold shock|Nucleic acid-binding, OB-fold	GO:0003676|GO:0003677|GO:0005737|GO:0006355|GO:0006950	G3DSA:2.40.50.140|PF00313|PIRSF002599|PR00050|PS00352|PTHR11544|SM00357|SSF50249|TIGR02381
cspE|cspE|AP_001272.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002059|IPR011129|IPR012156|IPR012340|IPR019844	Cold shock protein|Cold shock, CspA|Cold-shock conserved site|Cold-shock protein, DNA-binding|Nucleic acid-binding, OB-fold	GO:0003676|GO:0003677|GO:0006355	G3DSA:2.40.50.140|PF00313|PIRSF002599|PR00050|PS00352|PTHR11544|SM00357|SSF50249
cspF|cspF|AP_002180.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002059|IPR011129|IPR012156|IPR012340|IPR019844	Cold shock protein|Cold shock, CspA|Cold-shock conserved site|Cold-shock protein, DNA-binding|Nucleic acid-binding, OB-fold	GO:0003676|GO:0003677|GO:0006355	G3DSA:2.40.50.140|PF00313|PIRSF002599|PS00352|PTHR11544|SM00357|SSF50249
cspG|cspG|AP_001620.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002059|IPR011129|IPR012156|IPR012340|IPR019844	Cold shock protein|Cold shock, CspA|Cold-shock conserved site|Cold-shock protein, DNA-binding|Nucleic acid-binding, OB-fold	GO:0003676|GO:0003677|GO:0006355	G3DSA:2.40.50.140|PF00313|PIRSF002599|PR00050|PS00352|PTHR11544|SM00357|SSF50249
cspH|cspH|AP_001619.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002059|IPR011129|IPR012156|IPR012340|IPR019844	Cold shock protein|Cold shock, CspA|Cold-shock conserved site|Cold-shock protein, DNA-binding|Nucleic acid-binding, OB-fold	GO:0003676|GO:0003677|GO:0006355	G3DSA:2.40.50.140|PF00313|PIRSF002599|PS00352|PTHR11544|SM00357|SSF50249
cspI|cspI|AP_002174.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002059|IPR011129|IPR012156|IPR012340|IPR019844	Cold shock protein|Cold shock, CspA|Cold-shock conserved site|Cold-shock protein, DNA-binding|Nucleic acid-binding, OB-fold	GO:0003676|GO:0003677|GO:0006355	G3DSA:2.40.50.140|PF00313|PIRSF002599|PR00050|PS00352|PTHR11544|SM00357|SSF50249
csrA|csrA|AP_003263.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003751	Carbon storage regulator	GO:0003723|GO:0006109|GO:0006402	MF_00167|PD009007|PF02599|SSF117130|TIGR00202
cstA|cstA|AP_001245.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003706|IPR025299	Carbon starvation protein CstA|CstA C-terminal domain	GO:0009267|GO:0016020	PF02554|PF13722|PTHR30252|PTHR30252:SF0
cueO|cueO|AP_000784.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001117|IPR002355|IPR006311|IPR008972|IPR011706|IPR011707	Cupredoxin|Multicopper oxidase, copper-binding site|Multicopper oxidase, type 1|Multicopper oxidase, type 2|Multicopper oxidase, type 3|Twin-arginine translocation pathway, signal sequence	GO:0005507|GO:0016491|GO:0055114	G3DSA:2.60.40.420|PF00394|PF07731|PF07732|PS00080|PS51318|PTHR11709|PTHR11709:SF2|SSF49503
cueR|cueR|AP_001136.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000551|IPR009061|IPR011789|IPR015358	Cu(I)-responsive transcriptional regulator|DNA binding domain, putative|Transcription regulator HTH, MerR|Transcription regulator MerR, DNA binding	GO:0000166|GO:0003677|GO:0003700|GO:0005507|GO:0006355|GO:0045893	G3DSA:1.10.1660.10|PF00376|PF09278|PR00040|PS00552|PS50937|SM00422|SSF46955|TIGR02044
cusA|cusA|AP_001220.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001036|IPR004763|IPR027463	Acriflavin resistance protein|Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA|Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains	GO:0005215|GO:0006810|GO:0006812|GO:0008324|GO:0016020|GO:0016021	G3DSA:1.10.3850.10|G3DSA:3.30.2090.10|G3DSA:3.30.70.1430|PF00873|PR00702|PTHR32063|PTHR32063:SF0|SSF82693|SSF82714|SSF82866|TIGR00914
cusB|cusB|AP_001219.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR006143	RND efflux pump, membrane fusion protein	GO:0016020|GO:0055085	G3DSA:2.40.50.100|PF12700|PTHR30097|SSF111369|TIGR01730
cusC|cusC|AP_001217.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003423|IPR010131	Outer membrane efflux protein|RND efflux system, outer membrane lipoprotein, NodT	GO:0005215|GO:0006810|GO:0008289|GO:0016020	G3DSA:1.20.1600.10|PF02321|PS51257|PTHR30203|PTHR30203:SF0|SSF56954|TIGR01845
cusF|cusF|AP_001218.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR021647	Copper binding periplasmic protein CusF		PF11604
cusR|cusR|AP_001216.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001789|IPR001867|IPR006291|IPR011006|IPR011991|IPR016032	CheY-like superfamily|Signal transduction response regulator, C-terminal|Signal transduction response regulator, C-terminal effector|Signal transduction response regulator, heavy metal response|Signal transduction response regulator, receiver domain|Winged helix-turn-helix DNA-binding domain	GO:0000156|GO:0000160|GO:0003677|GO:0006355	G3DSA:1.10.10.10|G3DSA:3.40.50.2300|PF00072|PF00486|PS50110|PTHR26402|PTHR26402:SF63|SM00448|SM00862|SSF46894|SSF52172|TIGR01387
cusS|cusS|AP_001215.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003594|IPR003660|IPR003661|IPR004358|IPR005467|IPR006290|IPR009082	HAMP linker domain|Histidine kinase-like ATPase, ATP-binding domain|Signal transduction histidine kinase, core|Signal transduction histidine kinase, heavy metal sensor|Signal transduction histidine kinase, homodimeric domain|Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal	GO:0000155|GO:0000160|GO:0004673|GO:0004871|GO:0005524|GO:0007165|GO:0016020|GO:0016021|GO:0016310|GO:0016772	G3DSA:1.10.287.130|G3DSA:3.30.565.10|PF00512|PF00672|PF02518|PR00344|PS50109|PS50885|PTHR24423|PTHR24423:SF246|SM00304|SM00387|SM00388|SSF47384|SSF55874|TIGR01386
cutA|cutA|AP_004638.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004323|IPR011322|IPR023700	Divalent cation tolerance protein CutA, bacteria|Divalent ion tolerance protein, CutA|Nitrogen regulatory PII-like, alpha/beta	GO:0005507|GO:0005737|GO:0010038	G3DSA:3.30.70.830|MF_01160|PF03091|PTHR23419|SSF54913
cutC|cutC|AP_002494.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR005627|IPR023648	Copper homeostasis CutC domain|Copper homeostasis protein CutC	GO:0005507|GO:0055070	G3DSA:3.20.20.380|MF_00795|PF03932|PTHR12598|PTHR12598:SF0|SSF110395
cvpA|cvpA|AP_002913.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003825	Colicin V production, CvpA	GO:0009403|GO:0016020	PF02674
cvrA|cvrA|AP_001816.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR005170|IPR006037|IPR006153|IPR016166|IPR016169	CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2|Cation/H+ exchanger|FAD-binding, type 2|Regulator of K+ conductance, C-terminal|Transporter-associated domain	GO:0003824|GO:0006812|GO:0006813|GO:0008324|GO:0015299|GO:0016021|GO:0016614|GO:0050660|GO:0055085|GO:0055114	G3DSA:3.30.465.10|G3DSA:3.30.70.1450|PF00999|PF02080|PF03471|PTHR32507|PTHR32507:SF0|SM01091|SSF116726|SSF56176
cyaA|cyaA|AP_003994.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000274|IPR024685|IPR024686	Adenylate cyclase class-I, N-terminal domain|Adenylate cyclase class-I, conserved site|Adenylate cyclase, class-I	GO:0004016|GO:0006171	PF01295|PF12633|PIRSF001444|PS01092|PS01093
cyaY|cyaY|AP_003993.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002908|IPR020895	Frataxin conserved site|Frataxin/CyaY	GO:0008199|GO:0016226	G3DSA:3.30.920.10|MF_00142|PF01491|PS01344|PS50810|SSF55387|TIGR03421
cybB|cybB|AP_002041.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR016174	Di-haem cytochrome, transmembrane	GO:0016020|GO:0022904	PF00033|PTHR30529|PTHR30529:SF0|SSF81342
cycA|cycA|AP_004708.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002293|IPR004841	Amino acid permease domain|Amino acid/polyamine transporter I	GO:0003333|GO:0006810|GO:0015171|GO:0016020|GO:0055085	PF00324|PIRSF006060|PTHR11785|PTHR11785:SF30
cydA|cydA|AP_001370.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002585	Cytochrome d ubiquinol oxidase, subunit I	GO:0016020	PF01654|PIRSF006446|PTHR30365|PTHR30365:SF0
cydB|cydB|AP_001371.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003317	Cytochrome d ubiquinol oxidase, subunit II	GO:0016020|GO:0055114	PF02322|PIRSF000267|PTHR30365|PTHR30365:SF1|TIGR00203
cydC|cydC|AP_001516.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001140|IPR003439|IPR003593|IPR011527|IPR014223|IPR017871|IPR017940|IPR027417	AAA+ ATPase domain|ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC|ABC transporter, conserved site|ABC transporter, integral membrane type 1|ABC transporter, transmembrane domain|ABC transporter, transmembrane domain, type 1|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase	GO:0000166|GO:0005524|GO:0006810|GO:0016021|GO:0016887|GO:0017111|GO:0042626|GO:0055085	G3DSA:1.20.1560.10|G3DSA:3.40.50.300|PF00005|PF00664|PS00211|PS50893|PS50929|PTHR24222|PTHR24222:SF8|SM00382|SSF52540|SSF90123|TIGR02868
cydD|cydD|AP_001517.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001140|IPR003439|IPR003593|IPR011527|IPR014216|IPR017871|IPR017940|IPR027417	AAA+ ATPase domain|ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD|ABC transporter, conserved site|ABC transporter, integral membrane type 1|ABC transporter, transmembrane domain|ABC transporter, transmembrane domain, type 1|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase	GO:0000166|GO:0005524|GO:0006810|GO:0016020|GO:0016021|GO:0016887|GO:0017111|GO:0042626|GO:0042883|GO:0055085	G3DSA:1.20.1560.10|G3DSA:3.40.50.300|PF00005|PF00664|PS00211|PS50893|PS50929|PTHR24221|PTHR24221:SF15|SM00382|SSF52540|SSF90123|TIGR02857
cynR|cynR|AP_000990.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000847|IPR005119|IPR011991	LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain	GO:0003700|GO:0006355	G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PR00039|PS50931|PTHR32389|PTHR32389:SF0|SSF46785|SSF53850
cynS|cynS|AP_000992.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003712|IPR008076|IPR010982	Cyanate hydratase|Cyanate lyase, C-terminal|Lambda repressor-like, DNA-binding domain	GO:0003677|GO:0008824|GO:0009439	G3DSA:1.10.260.40|G3DSA:3.30.1160.10|MF_00535|PF02560|PIRSF001263|PR01693|SSF47413|SSF55234|TIGR00673
cynT|cynT|AP_000991.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001765|IPR015892	Carbonic anhydrase|Carbonic anhydrase, prokaryotic-like, conserved site	GO:0004089|GO:0008270|GO:0015976	G3DSA:3.40.1050.10|PF00484|PS00704|PS00705|PTHR11002|PTHR11002:SF1|SM00947|SSF53056
cynX|cynX|AP_000993.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004747|IPR011701|IPR016196|IPR020846	Cyanate transport system protein|Major facilitator superfamily|Major facilitator superfamily domain|Major facilitator superfamily domain, general substrate transporter	GO:0016021|GO:0055085	G3DSA:1.20.1250.20|PF07690|PS50850|PTHR24003|SSF103473|TIGR00896
cyoA|cyoA|AP_001082.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002429|IPR006333|IPR008972|IPR010514|IPR011759|IPR012141	Bo-type ubiquinol oxidase, subunit II|COX aromatic rich motif|Cupredoxin|Cytochrome C oxidase subunit II, transmembrane domain|Cytochrome c oxidase subunit II C-terminal|Cytochrome o ubiquinol oxidase subunit II	GO:0004129|GO:0005507|GO:0008827|GO:0009486|GO:0016020|GO:0016021|GO:0016682|GO:0022900|GO:0055114	G3DSA:1.10.287.90|G3DSA:2.60.40.420|PF00116|PF06481|PIRSF000292|PS50857|PS50999|PS51257|PTHR22888|PTHR22888:SF0|SSF49503|SSF81464|TIGR01433
cyoB|cyoB|AP_001081.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000883|IPR014207|IPR023615|IPR023616	Cytochrome c oxidase, subunit I|Cytochrome c oxidase, subunit I domain|Cytochrome c oxidase, subunit I, copper-binding site|Cytochrome o ubiquinol oxidase, subunit I	GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0016682|GO:0020037|GO:0055114	G3DSA:1.20.210.10|PF00115|PR01165|PS00077|PS50855|PTHR10422|PTHR10422:SF6|SSF81442|TIGR02843
cyoC|cyoC|AP_001080.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000298|IPR013833|IPR014206|IPR024791	Cytochrome c oxidase, subunit III|Cytochrome c oxidase, subunit III, 4-helical bundle|Cytochrome c/ubiquinol oxidase subunit III|Cytochrome o ubiquinol oxidase, subunit III	GO:0004129|GO:0005886|GO:0008827|GO:0015002|GO:0016020|GO:0019646|GO:0022904	G3DSA:1.20.120.80|PF00510|PS50253|PTHR11403|PTHR11403:SF0|SSF81452|TIGR02842
cyoD|cyoD|AP_001079.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR005171|IPR014210	Cytochrome C oxidase subunit IV prokaryotic|Cytochrome o ubiquinol oxidase subunit IV	GO:0008827|GO:0015990|GO:0016021	PF03626|TIGR02847
cyoE|cyoE|AP_001078.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000537|IPR006369	Protohaem IX farnesyltransferase|UbiA prenyltransferase family	GO:0004659|GO:0008495|GO:0016021|GO:0048034	MF_00154|PF01040|PS00943|PTHR11048|TIGR01473
cysA|cysA|AP_003016.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003439|IPR003593|IPR005666|IPR008995|IPR014769|IPR017871|IPR024765|IPR026251|IPR027417	AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter, sulphate/thiosulphate import, ATP-binding protein CysA|ABC transporter, sulphate/thiosulphate import, ATP-binding protein CysA, C-terminal|ABC transporter-like|Molybdate/tungstate binding, C-terminal|P-loop containing nucleoside triphosphate hydrolase|Sulphate transport system permease protein 1|TOBE-like domain	GO:0000166|GO:0005524|GO:0006810|GO:0008272|GO:0015419|GO:0016020|GO:0016887|GO:0017111|GO:0042626	G3DSA:3.40.50.300|PF00005|PF12857|PS00211|PS50893|PS51237|PTHR24220|PTHR24220:SF48|SM00382|SSF50331|SSF52540|TIGR00968
cysB|cysB|AP_001901.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000847|IPR005119|IPR011991	LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain	GO:0003700|GO:0006355	G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PR00039|PS50931|PTHR30530|PTHR30530:SF0|SSF46785|SSF53850
cysC|cysC|AP_003317.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002891|IPR027417	Adenylylsulphate kinase|P-loop containing nucleoside triphosphate hydrolase	GO:0000103|GO:0004020|GO:0005524	G3DSA:3.40.50.300|MF_00065|PF01583|PTHR11055|SSF52540|TIGR00455
cysD|cysD|AP_003319.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002500|IPR011784|IPR014729	Phosphoadenosine phosphosulphate reductase|Rossmann-like alpha/beta/alpha sandwich fold|Sulphate adenylyltransferase, small subunit	GO:0003824|GO:0004781|GO:0008152|GO:0019419	G3DSA:3.40.50.620|MF_00064|PF01507|PIRSF002936|PTHR30180|SSF52402|TIGR02039
cysE|cysE|AP_004184.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001451|IPR005881|IPR010493|IPR011004|IPR018357	Bacterial transferase hexapeptide repeat|Hexapeptide transferase, conserved site|Serine O-acetyltransferase|Serine acetyltransferase, N-terminal|Trimeric LpxA-like	GO:0005737|GO:0006535|GO:0009001|GO:0016740	G3DSA:1.10.3130.10|G3DSA:2.160.10.10|PF00132|PF06426|PS00101|PTHR23416|PTHR23416:SF11|SM00971|SSF51161|TIGR01172
cysG|cysG|AP_004421.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000878|IPR003043|IPR006366|IPR006367|IPR012409|IPR014776|IPR014777|IPR016040|IPR019478	NAD(P)-binding domain|Sirohaem synthase|Sirohaem synthase, N-terminal|Sirohaem synthase, dimerisation domain|Tetrapyrrole methylase|Tetrapyrrole methylase, subdomain 1|Tetrapyrrole methylase, subdomain 2|Uroporphiryn-III C-methyltransferase, conserved site|Uroporphyrin-III C-methyltransferase	GO:0004851|GO:0006779|GO:0008152|GO:0008168|GO:0009236|GO:0019354|GO:0043115|GO:0051266|GO:0051287|GO:0055114	G3DSA:1.10.8.210|G3DSA:3.30.160.110|G3DSA:3.30.950.10|G3DSA:3.40.1010.10|G3DSA:3.40.50.720|MF_01646|PF00590|PF10414|PF13241|PIRSF036426|PS00839|PS00840|PTHR21091|PTHR21091:SF16|SSF51735|SSF53790|SSF75615|TIGR01469|TIGR01470
cysH|cysH|AP_003329.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002500|IPR004511|IPR011800|IPR014729	Phosphoadenosine phosphosulphate reductase|Phosphoadenosine phosphosulphate reductase CysH|Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase|Rossmann-like alpha/beta/alpha sandwich fold	GO:0003824|GO:0004604|GO:0008152|GO:0009086|GO:0019344|GO:0019379|GO:0055114	G3DSA:3.40.50.620|MF_00063|PF01507|PTHR23293|PTHR23293:SF0|SSF52402|TIGR00434|TIGR02057
cysI|cysI|AP_003330.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR005117|IPR006066|IPR006067|IPR011786	Nitrite/Sulfite reductase ferredoxin-like domain|Nitrite/sulphite reductase 4Fe-4S domain|Nitrite/sulphite reductase iron-sulphur/siroheam-binding site|Sulphite reductase (NADPH) hemoprotein, beta subunit	GO:0004783|GO:0008652|GO:0009337|GO:0016491|GO:0020037|GO:0050661|GO:0051536|GO:0051539|GO:0055114	G3DSA:3.30.413.10|G3DSA:3.90.480.10|MF_01540|PF01077|PF03460|PR00397|PS00365|PTHR32363|PTHR32363:SF0|SSF55124|SSF56014|TIGR02041
cysJ|cysJ|AP_003331.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001094|IPR001433|IPR001709|IPR003097|IPR008254|IPR010199|IPR017927|IPR017938|IPR023173	FAD-binding, type 1|Ferredoxin reductase-type FAD-binding domain|Flavodoxin|Flavodoxin/nitric oxide synthase|Flavoprotein pyridine nucleotide cytochrome reductase|NADPH-cytochrome p450 reductase, FAD-binding, alpha-helical domain-3|Oxidoreductase FAD/NAD(P)-binding|Riboflavin synthase-like beta-barrel|Sulphite reductase [NADPH] flavoprotein, alpha chain	GO:0000103|GO:0004783|GO:0005506|GO:0010181|GO:0016491|GO:0019344|GO:0050660|GO:0055114	G3DSA:1.20.990.10|G3DSA:2.40.30.10|G3DSA:3.40.50.360|G3DSA:3.40.50.80|MF_01541|PF00175|PF00258|PF00667|PIRSF000207|PR00369|PR00371|PS50902|PS51384|PTHR19384|PTHR19384:SF18|SSF52218|SSF52343|SSF63380|TIGR01931
cysK|cysK|AP_003008.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001216|IPR001926|IPR005856|IPR005859	Cysteine synthase A|Cysteine synthase K/M|Cysteine synthase/cystathionine beta-synthase P-phosphate-binding site|Tryptophan synthase beta subunit-like PLP-dependent enzymes superfamily	GO:0004124|GO:0006535	G3DSA:3.40.50.1100|PF00291|PS00901|PTHR10314|PTHR10314:SF8|SSF53686|TIGR01136|TIGR01139
cysM|cysM|AP_003015.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001216|IPR001926|IPR005856|IPR005858	Cysteine synthase B|Cysteine synthase K/M|Cysteine synthase/cystathionine beta-synthase P-phosphate-binding site|Tryptophan synthase beta subunit-like PLP-dependent enzymes superfamily	GO:0004124|GO:0006535	G3DSA:3.40.50.1100|PF00291|PS00901|PTHR10314|PTHR10314:SF8|SSF53686|TIGR01136|TIGR01138
cysN|cysN|AP_003318.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000795|IPR004161|IPR005225|IPR009000|IPR009001|IPR011779|IPR027417	Elongation factor, GTP-binding domain|P-loop containing nucleoside triphosphate hydrolase|Small GTP-binding protein domain|Sulphate adenylyltransferase, large subunit|Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal|Translation elongation factor EFTu/EF1A, domain 2|Translation elongation/initiation factor/Ribosomal, beta-barrel	GO:0003924|GO:0005525|GO:0006790	G3DSA:2.40.30.10|G3DSA:3.40.50.300|MF_00062|PF00009|PF03144|PR00315|PS00301|PTHR23115|PTHR23115:SF34|SSF50447|SSF50465|SSF52540|TIGR00231|TIGR02034
cysP|cysP|AP_003019.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000957|IPR005669|IPR006059	Bacterial extracellular solute-binding, family 1|Sulphate/thiosulphate-binding, conserved site|Thiosulphate/Sulfate-binding protein	GO:0005215|GO:0006810|GO:0008271|GO:0008272|GO:0015419|GO:0030288	G3DSA:3.40.190.10|PF01547|PS00401|PS00757|PTHR30368|SSF53850|TIGR00971
cysQ|cysQ|AP_004714.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000760|IPR006240|IPR020550|IPR020583	3(2),5 -bisphosphate nucleotidase, bacterial|Inositol monophosphatase|Inositol monophosphatase, conserved site|Inositol monophosphatase, metal-binding site	GO:0000287|GO:0016020|GO:0046854	G3DSA:3.30.540.10|G3DSA:3.40.190.80|PF00459|PS00629|PS00630|PTHR20854|PTHR20854:SF5|SSF56655|TIGR01331
cysS|cysS|AP_001173.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR009080|IPR014729|IPR015273|IPR015803|IPR024909	Aminoacyl-tRNA synthetase, class 1a, anticodon-binding|Cysteine-tRNA ligase|Cysteinyl-tRNA synthetase, class Ia, DALR|Cysteinyl-tRNA synthetase/mycothiol ligase|Rossmann-like alpha/beta/alpha sandwich fold	GO:0000166|GO:0004812|GO:0004817|GO:0005524|GO:0005737|GO:0006418|GO:0006423	G3DSA:1.20.120.640|G3DSA:3.40.50.620|MF_00041|PF01406|PF09190|PR00983|PTHR10890|SM00840|SSF47323|SSF52374|TIGR00435
cysU|cysU|AP_003018.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000515|IPR005667|IPR011865	Binding-protein-dependent transport systems inner membrane component|Sulphate ABC transporter permease protein 2|Sulphate ABC transporter, permease protein CysT	GO:0005215|GO:0006810|GO:0008272|GO:0015116|GO:0015419|GO:0016020|GO:0016021	G3DSA:1.10.3720.10|PF00528|PS50928|PTHR30406|PTHR30406:SF0|SSF161098|TIGR00969|TIGR02139
cysW|cysW|AP_003017.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000515|IPR005667|IPR011866	Binding-protein-dependent transport systems inner membrane component|Sulphate ABC transporter permease protein 2|Sulphate ABC transporter, permease protein CysW	GO:0005215|GO:0006810|GO:0008272|GO:0015116|GO:0015419|GO:0016020|GO:0016021	G3DSA:1.10.3720.10|PF00528|PS50928|PTHR30406|PTHR30406:SF1|SSF161098|TIGR00969|TIGR02140
cysZ|cysZ|AP_003007.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR022985	CysZ, gammaproteobacteria		MF_00468|PF07264
cytR|cytR|AP_003875.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000843|IPR010982	Lambda repressor-like, DNA-binding domain|Transcription regulator HTH, LacI	GO:0003677|GO:0003700|GO:0005622|GO:0006355	G3DSA:1.10.260.40|G3DSA:3.40.50.2300|PF00356|PF13377|PS00356|PS50932|PTHR30146|PTHR30146:SF8|SM00354|SSF47413|SSF53822
dacA|dacA|AP_001281.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001967|IPR012338|IPR012907|IPR015956|IPR018044	Beta-lactamase/transpeptidase-like|Penicillin-binding protein-associated|Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal|Peptidase S11, D-alanyl-D-alanine carboxypeptidase A|Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal	GO:0004180|GO:0006508|GO:0009002	G3DSA:2.60.410.10|G3DSA:3.40.710.10|PF00768|PF07943|PR00725|PTHR21581|PTHR21581:SF0|SM00936|SSF56601|SSF69189
dacB|dacB|AP_003725.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000667|IPR012338	Beta-lactamase/transpeptidase-like|Peptidase S13, D-Ala-D-Ala carboxypeptidase C	GO:0004185|GO:0006508	G3DSA:3.40.710.10|PF02113|PR00922|PTHR30023|PTHR30023:SF0|SSF56601|TIGR00666
dacC|dacC|AP_001470.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001967|IPR012338|IPR012907|IPR015956|IPR018044	Beta-lactamase/transpeptidase-like|Penicillin-binding protein-associated|Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal|Peptidase S11, D-alanyl-D-alanine carboxypeptidase A|Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal	GO:0004180|GO:0006508|GO:0009002	G3DSA:2.60.410.10|G3DSA:3.40.710.10|PF00768|PF07943|PR00725|PTHR21581|PTHR21581:SF0|SM00936|SSF56601|SSF69189
dacD|dacD|AP_002610.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001967|IPR012338|IPR012907|IPR015956|IPR018044	Beta-lactamase/transpeptidase-like|Penicillin-binding protein-associated|Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal|Peptidase S11, D-alanyl-D-alanine carboxypeptidase A|Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal	GO:0004180|GO:0006508|GO:0009002	G3DSA:2.60.410.10|G3DSA:3.40.710.10|PF00768|PF07943|PR00725|PTHR21581|PTHR21581:SF0|SM00936|SSF56601|SSF69189
dadA|dadA|AP_001814.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR006076|IPR016040|IPR023080	D-amino acid dehydrogenase small subunit, DadA|FAD dependent oxidoreductase|NAD(P)-binding domain	GO:0008718|GO:0016491|GO:0019478|GO:0055114	G3DSA:3.30.9.10|G3DSA:3.40.50.720|MF_01202|PF01266|PTHR13847|PTHR13847:SF13|SSF51905|SSF54373
dadX|dadX|AP_001815.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000821|IPR001608|IPR009006|IPR011079|IPR020622	Alanine racemase|Alanine racemase, C-terminal|Alanine racemase, N-terminal|Alanine racemase, pyridoxal-phosphate attachment site|Alanine racemase/group IV decarboxylase, C-terminal	GO:0003824|GO:0006522|GO:0008784	G3DSA:2.40.37.10|G3DSA:3.20.20.10|MF_01201|PF00842|PF01168|PR00992|PS00395|PTHR30511|SM01005|SSF50621|SSF51419|TIGR00492
damX|damX|AP_004402.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR007730	Sporulation-related domain		G3DSA:3.30.70.1070|PF05036|SSF110997
dam|dam|AP_004403.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002052|IPR012263|IPR012327|IPR023095	Adenine modification methylase, M.EcoRV-type|Adenine-specific methyltransferase, domain 2|D12 class N6 adenine-specific DNA methyltransferase|DNA methylase, N-6 adenine-specific, conserved site	GO:0003676|GO:0008168|GO:0009007|GO:0032259|GO:0032775	G3DSA:1.10.1020.10|G3DSA:3.40.50.150|PF02086|PIRSF000398|PR00505|PS00092|PTHR30481|SSF53335|TIGR00571
dapA|dapA|AP_003064.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002220|IPR005263|IPR013785|IPR020624|IPR020625	Aldolase-type TIM barrel|Dihydrodipicolinate synthase, DapA|Dihydrodipicolinate synthetase, active site|Dihydrodipicolinate synthetase, conserved site|Dihydrodipicolinate synthetase-like	GO:0003824|GO:0008152|GO:0008840|GO:0009089|GO:0016829	G3DSA:3.20.20.70|MF_00418|PF00701|PIRSF001365|PR00146|PS00665|PS00666|PTHR12128|PTHR12128:SF10|SSF51569|TIGR00674
dapB|dapB|AP_000695.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000846|IPR011770|IPR016040|IPR022663|IPR022664|IPR023940	Dihydrodipicolinate reductase, C-terminal|Dihydrodipicolinate reductase, N-terminal|Dihydrodipicolinate reductase, bacterial|Dihydrodipicolinate reductase, bacterial/plant|Dihydrodipicolinate reductase, conserved site|NAD(P)-binding domain	GO:0008839|GO:0009089|GO:0055114|GO:0070402	G3DSA:3.40.50.720|MF_00102|PF01113|PF05173|PIRSF000161|PS01298|PTHR20836|PTHR20836:SF0|SSF51735|SSF55347|TIGR00036
dapD|dapD|AP_000826.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001451|IPR005664|IPR011004|IPR018357|IPR023180	Bacterial transferase hexapeptide repeat|Hexapeptide transferase, conserved site|Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family|Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1|Trimeric LpxA-like	GO:0008666|GO:0009089|GO:0016740	G3DSA:1.10.166.10|G3DSA:2.160.10.10|MF_00811|PF00132|PS00101|PTHR19136|PTHR19136:SF52|SSF51161|TIGR00965
dapE|dapE|AP_003057.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001261|IPR002933|IPR005941|IPR011650	ArgE/DapE/ACY1/CPG2/YscS, conserved site|Peptidase M20|Peptidase M20, dimerisation domain|Succinyl-diaminopimelate desuccinylase, proteobacteria	GO:0006508|GO:0008152|GO:0008237|GO:0009014|GO:0009089|GO:0016787	G3DSA:3.30.70.360|G3DSA:3.40.630.10|MF_01690|PF01546|PF07687|PS00758|PS00759|PTHR11014|PTHR11014:SF5|SSF53187|SSF55031|TIGR01246
dapF|dapF|AP_003990.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001653|IPR018510	Diaminopimelate epimerase, DapF|Diaminopimelate epimerase, active site	GO:0005737|GO:0008837|GO:0009089	G3DSA:3.10.310.10|MF_00197|PF01678|PS01326|PTHR31689|PTHR31689:SF0|SSF54506|TIGR00652
dbpA|dbpA|AP_001971.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000629|IPR001650|IPR005580|IPR011545|IPR014001|IPR014014|IPR027417	DNA/RNA helicase, DEAD/DEAH box type, N-terminal|DbpA, RNA-binding|Helicase, C-terminal|Helicase, superfamily 1/2, ATP-binding domain|P-loop containing nucleoside triphosphate hydrolase|RNA helicase, ATP-dependent, DEAD-box, conserved site|RNA helicase, DEAD-box type, Q motif	GO:0003676|GO:0004386|GO:0005524|GO:0008026	G3DSA:3.40.50.300|PF00270|PF00271|PF03880|PS00039|PS51192|PS51194|PS51195|PTHR24031|PTHR24031:SF53|SM00487|SM00490|SSF52540
dcd|dcd|AP_002665.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR008180|IPR011962	DeoxyUTP pyrophosphatase|Deoxycytidine triphosphate deaminase	GO:0006229|GO:0008829|GO:0016787|GO:0046080	G3DSA:2.70.40.10|MF_00146|PF00692|SSF51283|TIGR02274
dcm|dcm|AP_002572.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001525	C-5 cytosine methyltransferase	GO:0003677|GO:0006306|GO:0008168	G3DSA:3.40.50.150|G3DSA:3.90.120.10|PF00145|PR00105|PTHR10629|PTHR10629:SF11|SSF53335|TIGR00675
dcp|dcp|AP_002159.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001567|IPR024077|IPR024079|IPR024080	Metallopeptidase, catalytic domain|Neurolysin/Thimet oligopeptidase, N-terminal|Neurolysin/Thimet oligopeptidase, domain 2|Peptidase M3A/M3B	GO:0004222|GO:0006508|GO:0008237	G3DSA:1.10.1370.10|G3DSA:1.20.1050.40|G3DSA:3.40.390.10|PF01432|PTHR11804|PTHR11804:SF8|SSF55486
dcrB|dcrB|AP_004320.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR014894	Protein DcrB		PF08786|PS51257
dctA|dctA|AP_004265.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001991|IPR018107|IPR023954	C4-dicarboxylate transport protein|Sodium:dicarboxylate symporter|Sodium:dicarboxylate symporter, conserved site	GO:0005886|GO:0006835|GO:0015293|GO:0016020|GO:0017153	G3DSA:1.10.3860.10|MF_01300|PF00375|PR00173|PS00713|PS00714|PTHR11958|PTHR11958:SF26|SSF118215
dcuA|dcuA|AP_004639.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004668	Anaerobic c4-dicarboxylate membrane transporter	GO:0015556|GO:0015740|GO:0016021	PF03605|PTHR30635|TIGR00770
dcuB|dcuB|AP_004624.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004668	Anaerobic c4-dicarboxylate membrane transporter	GO:0015556|GO:0015740|GO:0016021	PF03605|PIRSF004539|PTHR30635|TIGR00770
dcuC|dcuC|AP_001268.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR018385	C4-dicarboxylate anaerobic carrier-like	GO:0016021	PF03606
dcuC|dcuC|AP_001270.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004669|IPR018385	C4-dicarboxylate anaerobic carrier|C4-dicarboxylate anaerobic carrier-like	GO:0015556|GO:0015740|GO:0016021	PF03606|TIGR00771
dcuD|dcuD|AP_003769.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004669|IPR018385	C4-dicarboxylate anaerobic carrier|C4-dicarboxylate anaerobic carrier-like	GO:0015556|GO:0015740|GO:0016021	PF03606|TIGR00771
dcuR|dcuR|AP_004625.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001789|IPR011006|IPR024187	CheY-like superfamily|Signal transduction response regulator, citrate/malate metabolism|Signal transduction response regulator, receiver domain	GO:0000156|GO:0000160|GO:0001071|GO:0003677|GO:0005737|GO:0006355|GO:0009605	G3DSA:3.40.50.2300|PF00072|PIRSF006171|PS50110|PTHR24423|PTHR24423:SF357|SM00448|SSF52172
dcuS|dcuS|AP_004626.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000014|IPR003594|IPR004358|IPR005467|IPR009082|IPR013767|IPR016120	Histidine kinase-like ATPase, ATP-binding domain|PAS domain|PAS fold|Signal transduction histidine kinase, core|Signal transduction histidine kinase, homodimeric domain|Signal transduction histidine kinase, sporulation regulator SpoOB|Signal transduction histidine kinase-related protein, C-terminal	GO:0000155|GO:0000160|GO:0004871|GO:0005524|GO:0006355|GO:0007165|GO:0016310|GO:0016772	G3DSA:1.10.287.130|G3DSA:3.30.450.20|G3DSA:3.30.565.10|PF00989|PF02518|PR00344|PS50109|PS50112|PTHR24423|PTHR24423:SF82|SM00091|SM00387|SSF103190|SSF55785|SSF55874|SSF55890
ddg|ddg|AP_002978.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004960|IPR011920	Bacterial lipid A biosynthesis acyltransferase|Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase	GO:0009244|GO:0009276|GO:0016021|GO:0016746|GO:0016747	PF03279|PIRSF026649|PTHR30606|TIGR02207
ddlA|ddlA|AP_001032.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000291|IPR005905|IPR011095|IPR011127|IPR011761|IPR013815|IPR013816|IPR016185	ATP-grasp fold|ATP-grasp fold, subdomain 1|ATP-grasp fold, subdomain 2|D-alanine--D-alanine ligase|D-alanine--D-alanine ligase, C-terminal|D-alanine--D-alanine ligase, N-terminal domain|D-alanine--D-alanine ligase/VANA/B/C, conserved site|Pre-ATP-grasp domain	GO:0003824|GO:0005524|GO:0005737|GO:0008716|GO:0009252|GO:0046872	G3DSA:3.30.1490.20|G3DSA:3.30.470.20|G3DSA:3.40.50.20|MF_00047|PF01820|PF07478|PS00843|PS00844|PS50975|PTHR23132|PTHR23132:SF0|SSF52440|SSF56059|TIGR01205
ddlB|ddlB|AP_000755.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000291|IPR005905|IPR011095|IPR011127|IPR011761|IPR013815|IPR013816|IPR016185	ATP-grasp fold|ATP-grasp fold, subdomain 1|ATP-grasp fold, subdomain 2|D-alanine--D-alanine ligase|D-alanine--D-alanine ligase, C-terminal|D-alanine--D-alanine ligase, N-terminal domain|D-alanine--D-alanine ligase/VANA/B/C, conserved site|Pre-ATP-grasp domain	GO:0003824|GO:0005524|GO:0005737|GO:0008716|GO:0009252|GO:0046872	G3DSA:3.30.1490.20|G3DSA:3.30.470.20|G3DSA:3.40.50.20|MF_00047|PF01820|PF07478|PS00843|PS00844|PS50975|PTHR23132|PTHR23132:SF0|SSF52440|SSF56059|TIGR01205
ddpA|ddpA|AP_002110.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000914|IPR023765	Bacterial extracellular solute-binding protein, family 5|Bacterial extracellular solute-binding protein, family 5, conserved site	GO:0005215|GO:0006810	G3DSA:3.10.105.10|G3DSA:3.40.190.10|PF00496|PIRSF002741|PS01040|PTHR30290|PTHR30290:SF0|SSF53850
ddpB|ddpB|AP_002109.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000515	Binding-protein-dependent transport systems inner membrane component	GO:0005215|GO:0006810|GO:0016020	G3DSA:1.10.3720.10|PF00528|PTHR30465|PTHR30465:SF3|SSF161098
ddpC|ddpC|AP_002108.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000515|IPR025966	Binding-protein-dependent transport systems inner membrane component|Oligopeptide transport permease C-like, N-terminal domain	GO:0005215|GO:0006810|GO:0016020	G3DSA:1.10.3720.10|PF00528|PF12911|PS50928|PTHR30465|PTHR30465:SF1|SSF161098
ddpD|ddpD|AP_002107.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003439|IPR003593|IPR010066|IPR013563|IPR017871|IPR027417	AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal|Oligopeptide/dipeptide ABC transporter, C-terminal|P-loop containing nucleoside triphosphate hydrolase	GO:0000166|GO:0005524|GO:0015197|GO:0015833|GO:0016020|GO:0016887|GO:0017111	G3DSA:3.40.50.300|PF00005|PF08352|PS00211|PS50893|PTHR24220|PTHR24220:SF177|SM00382|SSF52540|TIGR01727
ddpF|ddpF|AP_002106.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003439|IPR003593|IPR010066|IPR013563|IPR017871|IPR027417	AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal|Oligopeptide/dipeptide ABC transporter, C-terminal|P-loop containing nucleoside triphosphate hydrolase	GO:0000166|GO:0005524|GO:0015197|GO:0015833|GO:0016020|GO:0016887|GO:0017111	G3DSA:3.40.50.300|PF00005|PF08352|PS00211|PS50893|PTHR24220|PTHR24220:SF81|SM00382|SSF52540|TIGR01727
ddpX|ddpX|AP_002111.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000755|IPR009045	Hedgehog signalling/DD-peptidase zinc-binding domain|Peptidase M15D, VanX D-ala-D-ala dipeptidase	GO:0005618|GO:0006508|GO:0008237|GO:0016805	G3DSA:3.30.1380.10|PF01427|PIRSF026671|SSF55166
deaD|deaD|AP_003707.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000629|IPR001650|IPR005580|IPR011545|IPR014001|IPR014014|IPR021046|IPR027417	Cold-shock protein, DEAD box A, C-terminal|DNA/RNA helicase, DEAD/DEAH box type, N-terminal|DbpA, RNA-binding|Helicase, C-terminal|Helicase, superfamily 1/2, ATP-binding domain|P-loop containing nucleoside triphosphate hydrolase|RNA helicase, ATP-dependent, DEAD-box, conserved site|RNA helicase, DEAD-box type, Q motif	GO:0003676|GO:0004386|GO:0005524|GO:0008026|GO:0016817	G3DSA:3.40.50.300|PF00270|PF00271|PF03880|PF12343|PS00039|PS51192|PS51194|PS51195|PTHR24031|PTHR24031:SF53|SM00487|SM00490|SSF52540
dedA|dedA|AP_002917.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR015414	SNARE associated Golgi protein		PF09335|PTHR30353|PTHR30353:SF0
dedD|dedD|AP_002914.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR007730	Sporulation-related domain		G3DSA:3.30.70.1070|PF05036|SSF110997
def|def|AP_004504.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000181|IPR023635	Formylmethionine deformylase|Peptide deformylase	GO:0005506|GO:0042586	G3DSA:3.90.45.10|MF_00163|PF01327|PIRSF004749|PR01576|PTHR10458|SSF56420|TIGR00079
degP|degP|AP_000822.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001478|IPR001940|IPR009003|IPR011782	PDZ domain|Peptidase S1C|Peptidase S1C, Do|Trypsin-like cysteine/serine peptidase domain	GO:0003824|GO:0004252|GO:0005515|GO:0006508	G3DSA:2.30.42.10|G3DSA:2.40.10.10|PF00595|PF13365|PR00834|PS50106|PTHR22939|PTHR22939:SF10|SM00228|SSF50156|SSF50494|TIGR02037
degQ|degQ|AP_003776.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001478|IPR001940|IPR009003|IPR011782	PDZ domain|Peptidase S1C|Peptidase S1C, Do|Trypsin-like cysteine/serine peptidase domain	GO:0003824|GO:0004252|GO:0005515|GO:0006508	G3DSA:2.30.42.10|G3DSA:2.40.10.10|PF00595|PF13365|PR00834|PS50106|PTHR22939|PTHR22939:SF10|SM00228|SSF50156|SSF50494|TIGR02037
degS|degS|AP_003777.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001254|IPR001478|IPR001940|IPR009003|IPR011783	PDZ domain|Peptidase S1|Peptidase S1C|Peptidase S1C, DegS|Trypsin-like cysteine/serine peptidase domain	GO:0003824|GO:0004252|GO:0005515|GO:0006508	G3DSA:2.30.42.10|G3DSA:2.40.10.10|PF00089|PF00595|PR00834|PS50106|PTHR22939|PTHR22939:SF10|SM00228|SSF50156|SSF50494|TIGR02038
deoA|deoA|AP_004870.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000053|IPR000312|IPR013102|IPR013465|IPR017459|IPR017872|IPR018090	Glycosyl transferase family 3, N-terminal domain|Glycosyl transferase, family 3|Pyrimidine nucleoside phosphorylase, C-terminal|Pyrimidine-nucleoside phosphorylase|Pyrimidine-nucleoside phosphorylase, bacterial/eukaryotic|Pyrimidine-nucleoside phosphorylase, conserved site|Thymidine phosphorylase	GO:0004645|GO:0006206|GO:0006213|GO:0008152|GO:0009032|GO:0016154|GO:0016757|GO:0016763	G3DSA:1.20.970.10|G3DSA:3.40.1030.10|G3DSA:3.90.1170.30|MF_01628|PF00591|PF02885|PF07831|PIRSF000478|PS00647|PTHR10515|PTHR10515:SF0|SM00941|SSF47648|SSF52418|SSF54680|TIGR02643|TIGR02644
deoB|deoB|AP_004871.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR006124|IPR010045|IPR017849|IPR017850|IPR024052	Alkaline phosphatase-like, alpha/beta/alpha|Alkaline-phosphatase-like, core domain|Metalloenzyme|Phosphopentomutase|Phosphopentomutase DeoB cap domain	GO:0000287|GO:0003824|GO:0005737|GO:0008152|GO:0008973|GO:0009117|GO:0043094|GO:0046872	G3DSA:3.30.70.1250|G3DSA:3.40.720.10|MF_00740|PF01676|PIRSF001491|PTHR21110|PTHR21110:SF0|SSF143856|SSF53649|TIGR01696
deoC|deoC|AP_004869.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002915|IPR011343|IPR013785|IPR023649	Aldolase-type TIM barrel|DeoC/FbaB/ lacD aldolase|Deoxyribose-phosphate aldolase|Deoxyribose-phosphate aldolase, bacterial	GO:0003824|GO:0004139|GO:0005737|GO:0009264|GO:0016829	G3DSA:3.20.20.70|MF_00592|PF01791|PIRSF001357|PTHR10889|SSF51569|TIGR00126
deoD|deoD|AP_004872.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000845|IPR004402|IPR018016|IPR018017	Nucleoside phosphorylase|Nucleoside phosphorylase domain|Nucleoside phosphorylase, conserved site|Purine nucleoside phosphorylase DeoD-type	GO:0003824|GO:0004731|GO:0006139|GO:0009116|GO:0016763	G3DSA:3.40.50.1580|MF_01627|PF01048|PS01232|PTHR21234|PTHR21234:SF7|SSF53167|TIGR00107
deoR|deoR|AP_001471.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001034|IPR014036|IPR018356	DeoR C-terminal sensor domain|HTH DeoR N-terminal domain|Transcription regulator, HTH DeoR-type, conserved site	GO:0003700|GO:0005622|GO:0006355	G3DSA:3.40.50.1360|PF00455|PF08220|PS00894|PS51000|PTHR30363|PTHR30363:SF0|SM00420|SSF100950
der|der|AP_003097.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR005225|IPR006073|IPR015946|IPR016484|IPR027417	GTP binding domain|GTP-binding protein EngA|K homology domain-like, alpha/beta|P-loop containing nucleoside triphosphate hydrolase|Small GTP-binding protein domain	GO:0005525	G3DSA:3.30.300.20|G3DSA:3.40.50.300|MF_00195|PF01926|PIRSF006485|PR00326|PTHR11649|PTHR11649:SF5|SSF52540|TIGR00231|TIGR03594
dfp|dfp|AP_004152.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003382|IPR005252|IPR007085	Coenzyme A biosynthesis bifunctional protein CoaBC|DNA/pantothenate metabolism flavoprotein, C-terminal|Flavoprotein	GO:0003824|GO:0004632|GO:0004633|GO:0010181|GO:0015937|GO:0015941	G3DSA:3.40.50.10300|G3DSA:3.40.50.1950|PF02441|PF04127|PTHR14359|PTHR14359:SF6|SSF102645|SSF52507|TIGR00521
dgkA|dgkA|AP_004543.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000829	Diacylglycerol kinase, prokaryotic	GO:0004143|GO:0008654|GO:0016020	G3DSA:1.10.3830.10|PF01219|PS01069
dgoA|dgoA|AP_004100.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000887|IPR013785	Aldolase-type TIM barrel|KDPG/KHG aldolase	GO:0003824|GO:0008152|GO:0016829	G3DSA:3.20.20.70|PF01081|PTHR30246|PTHR30246:SF0|SSF51569
dgoD|dgoD|AP_004101.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001354|IPR013341|IPR013342|IPR018110|IPR023592	D-galactonate dehydratase|Mandelate racemase/muconate lactonizing enzyme|Mandelate racemase/muconate lactonizing enzyme, C-terminal|Mandelate racemase/muconate lactonizing enzyme, N-terminal|Mandelate racemase/muconate lactonizing enzyme, conserved site	GO:0003824|GO:0008152|GO:0008869|GO:0009063|GO:0034194	G3DSA:3.20.20.120|G3DSA:3.30.390.10|MF_01289|PF02746|PF13378|PS00908|PS00909|PTHR13794|PTHR13794:SF4|SM00922|SSF51604|SSF54826
dgoK|dgoK|AP_004099.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR007729	2-keto-3-deoxy-galactonokinase	GO:0008671|GO:0034194	PF05035
dgoR|dgoR|AP_004098.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000524|IPR008920|IPR011711|IPR011991|IPR027376	FadR/GntR C-terminal domain|Fatty acid responsive transcription factor FadR, C-terminal|GntR, C-terminal|Transcription regulator HTH, GntR|Winged helix-turn-helix DNA-binding domain	GO:0000062|GO:0003677|GO:0003700|GO:0005622|GO:0006355|GO:0019217	G3DSA:1.10.10.10|G3DSA:1.20.120.530|PF00392|PF07729|PR00035|PS50949|PTHR11751|SM00345|SM00895|SSF46785|SSF48008
dgoT|dgoT|AP_004102.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000849|IPR004744|IPR011701|IPR016196	D-galactonate transporter|Major facilitator superfamily|Major facilitator superfamily domain, general substrate transporter|Sugar phosphate transporter	GO:0005215|GO:0006810|GO:0016021|GO:0055085	G3DSA:1.20.1250.20|PF07690|PTHR11662|PTHR11662:SF18|SSF103473|TIGR00881|TIGR00893
dgsA|dgsA|AP_002215.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000600|IPR011991	ROK|Winged helix-turn-helix DNA-binding domain		G3DSA:1.10.10.10|G3DSA:3.30.420.40|PF00480|PTHR18964|PTHR18964:SF26|SSF46785|SSF53067
dgt|dgt|AP_000821.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003607|IPR006261|IPR006674|IPR020779|IPR023293|IPR027432	Deoxyguanosinetriphosphate triphosphohydrolase|Deoxyguanosinetriphosphate triphosphohydrolase, C-terminal domain|Deoxyguanosinetriphosphate triphosphohydrolase, central domain|Deoxyguanosinetriphosphate triphosphohydrolase, proteobacteria|HD domain|HD/PDEase domain	GO:0000287|GO:0003824|GO:0006203|GO:0008081|GO:0008832|GO:0046039|GO:0046872	G3DSA:1.10.3210.10|G3DSA:1.10.3410.10|G3DSA:1.10.3550.10|MF_00030|PF01966|PTHR11373|PTHR11373:SF21|SM00471|SSF109604|TIGR01353
dhaH|dhaH|AP_001823.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000032|IPR001020|IPR004701|IPR005698|IPR008279|IPR008731|IPR012844	Dihydroxyacetone kinase, subunit phosphotransferase|PEP-utilising enzyme, mobile domain|Phosphotransferase system, HPr histidine phosphorylation site|Phosphotransferase system, PEP-utilising enzyme, N-terminal|Phosphotransferase system, fructose subfamily IIA component|Phosphotransferase system, phosphocarrier HPr protein|Phosphotransferase system, phosphocarrier HPr protein-like	GO:0005351|GO:0005737|GO:0006810|GO:0008965|GO:0009401|GO:0016021|GO:0016310|GO:0016772	G3DSA:1.10.274.10|G3DSA:3.30.1340.10|G3DSA:3.40.50.510|G3DSA:3.50.30.10|PF00381|PF00391|PF03610|PF05524|PR00107|PS00369|PS51096|PS51350|PTHR22931|PTHR22931:SF16|SSF47831|SSF52009|SSF53062|SSF55594|TIGR01003|TIGR02364
dhaK|dhaK|AP_001825.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004006|IPR012736	Dak kinase|Dihydroxyacetone kinase DhaK, subunit 1	GO:0004371|GO:0006071	G3DSA:3.30.1180.20|G3DSA:3.40.50.10440|PF02733|PS51481|PTHR32101|PTHR32101:SF0|SSF82549|TIGR02363
dhaL|dhaL|AP_001824.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004007|IPR012737	Dak phosphatase|Dihydroxyacetone kinase, subunit L	GO:0004371|GO:0006071|GO:0016772	PF02734|PS51480|PTHR32101|SSF101473|TIGR02365
dhaR|dhaR|AP_001826.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000014|IPR002078|IPR002197|IPR003018|IPR003593|IPR009057|IPR013767|IPR025662|IPR025943|IPR027417	AAA+ ATPase domain|DNA binding HTH domain,  Fis-type|GAF domain|Homeodomain-like|P-loop containing nucleoside triphosphate hydrolase|PAS domain|PAS fold|RNA polymerase sigma factor 54 interaction domain|Sigma-54 interaction domain, ATP-binding site 1|Sigma-54 interaction domain, ATP-binding site 2	GO:0000166|GO:0003677|GO:0003700|GO:0004871|GO:0005515|GO:0005524|GO:0006355|GO:0007165|GO:0008134|GO:0017111	G3DSA:1.10.10.60|G3DSA:1.10.8.60|G3DSA:3.30.450.20|G3DSA:3.40.50.300|PF00158|PF00989|PF01590|PF02954|PS00675|PS00676|PS50045|PTHR32071|PTHR32071:SF0|SM00065|SM00091|SM00382|SSF46689|SSF52540|SSF55785
dicA|dicA|AP_002192.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001387|IPR010982	Helix-turn-helix|Lambda repressor-like, DNA-binding domain	GO:0003677|GO:0043565	G3DSA:1.10.260.40|PF01381|PS50943|SM00530|SSF47413
dicB|dicB|AP_002196.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR008022	DicB		PD053043|PF05358
dicC|dicC|AP_002191.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR010982	Lambda repressor-like, DNA-binding domain	GO:0003677	G3DSA:1.10.260.40|SSF47413
dinB|dinB|AP_000884.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001126|IPR017961|IPR017963|IPR022880|IPR024728	DNA polymerase IV|DNA polymerase type-Y, HhH motif|DNA polymerase, Y-family, little finger domain|DNA-repair protein, UmuC-like|DNA-repair protein, UmuC-like, N-terminal	GO:0003684|GO:0003887|GO:0006281	G3DSA:1.10.150.20|G3DSA:3.30.1490.100|G3DSA:3.30.70.270|MF_01113|PF00817|PF11798|PF11799|PS50173|PTHR11076|PTHR11076:SF12|SSF100879|SSF56672
dinD|dinD|AP_004147.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091				
dinF|dinF|AP_004545.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002528	Multi antimicrobial extrusion protein	GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085	PF01554|PTHR11206|PTHR11206:SF3|TIGR00797
dinG|dinG|AP_001430.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR006555|IPR010614|IPR011545|IPR014001|IPR014013|IPR027417	ATP-dependent helicase, C-terminal|DEAD2|DNA/RNA helicase, DEAD/DEAH box type, N-terminal|Helicase, superfamily 1/2, ATP-binding domain|Helicase, superfamily 1/2, ATP-binding domain, DinG/Rad3-type|P-loop containing nucleoside triphosphate hydrolase	GO:0003676|GO:0003677|GO:0004003|GO:0005524|GO:0006139|GO:0008026|GO:0016817|GO:0016818	G3DSA:3.40.50.300|PF00270|PF06733|PF13307|PS51193|PTHR11472|PTHR11472:SF31|SM00487|SM00491|SSF52540
dinI|dinI|AP_001687.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR010391	DNA damage-inducible protein DinI-like		G3DSA:3.30.910.10|PF06183|SSF54857
dinJ|dinJ|AP_000881.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR007337|IPR026262	Antitoxin DinJ|RelB antitoxin/Antitoxin DinJ	GO:0000986|GO:0015643|GO:0044010	PF04221|PIRSF003108|TIGR02384
dipZ|dipZ|AP_004637.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003834|IPR012336|IPR017937|IPR022910	Cytochrome c assembly protein, transmembrane domain|Thiol:disulphide interchange protein DsbD|Thioredoxin, conserved site|Thioredoxin-like fold	GO:0016020|GO:0017004|GO:0045454|GO:0047134|GO:0055114	G3DSA:2.60.40.1250|G3DSA:3.40.30.10|MF_00399|PF02683|PF11412|PF13899|PS00194|PS51352|PTHR32234|PTHR32234:SF1|SSF52833|SSF74863
djlA|djlA|AP_000719.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001623|IPR007791|IPR023749	DnaJ domain|DnaJ-like protein DjlA|Heat shock protein DnaJ-like protein DjlA	GO:0051087	G3DSA:1.10.287.110|G3DSA:1.10.3680.10|MF_01153|PF00226|PF05099|PR00625|PS50076|SM00271|SSF46565
djlB|djlB|AP_001295.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001623	DnaJ domain		G3DSA:1.10.287.110|PF00226|SM00271|SSF46565
djlC|djlC|AP_001298.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001623	DnaJ domain		SM00271|SSF46565
dkgA|dkgA|AP_003563.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001395|IPR018170|IPR020471|IPR023210	Aldo/keto reductase|Aldo/keto reductase subgroup|Aldo/keto reductase, conserved site|NADP-dependent oxidoreductase domain	GO:0016491|GO:0055114	G3DSA:3.20.20.100|PF00248|PIRSF000097|PR00069|PS00062|PS00063|PS00798|PTHR11732|PTHR11732:SF34|SSF51430
dkgB|dkgB|AP_000862.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001395|IPR018170|IPR020471|IPR023210	Aldo/keto reductase|Aldo/keto reductase subgroup|Aldo/keto reductase, conserved site|NADP-dependent oxidoreductase domain	GO:0016491|GO:0055114	G3DSA:3.20.20.100|PF00248|PIRSF000097|PR00069|PS00062|PS00798|PTHR11732|PTHR11732:SF100|SSF51430
dksA|dksA|AP_000806.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000962|IPR012784|IPR020458|IPR020460	RNA polymerase-binding transcription factor DksA|Zinc finger, DksA/TraR C4-type|Zinc finger, DksA/TraR C4-type conserved site|Zinc finger, DksA/TraR C4-type, bacteria	GO:0008270	MF_00926|PF01258|PR00618|PS01102|PS51128|SSF109635|SSF57716|TIGR02420
dld|dld|AP_002730.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR006094|IPR012256|IPR015409|IPR016164|IPR016166|IPR016167|IPR016169|IPR016172|IPR016173	CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2|D-lactate dehydrogenase|D-lactate dehydrogenase, C-terminal subdomain 1|D-lactate dehydrogenase, C-terminal subdomain 2|D-lactate dehydrogenase, membrane binding, C-terminal|FAD linked oxidase, N-terminal|FAD-binding, type 2|FAD-binding, type 2, subdomain 1|FAD-linked oxidase-like, C-terminal	GO:0003824|GO:0004457|GO:0005887|GO:0006089|GO:0008762|GO:0016491|GO:0016614|GO:0050660|GO:0051287|GO:0055085|GO:0055114	G3DSA:3.30.1370.20|G3DSA:3.30.43.10|G3DSA:3.30.465.10|G3DSA:3.30.70.610|PF01565|PF09330|PIRSF000101|PS51387|PTHR11748|PTHR11748:SF32|SSF55103|SSF56176
dmsA|dmsA|AP_001524.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR006311|IPR006655|IPR006656|IPR006657|IPR006963|IPR009010|IPR011888|IPR019546|IPR027467	Anaerobic dimethyl sulphoxide reductase, subunit A, DmsA/YnfE|Aspartate decarboxylase-like domain|Molybdopterin oxidoreductase|Molybdopterin oxidoreductase, 4Fe-4S domain|Molybdopterin oxidoreductase, molybdopterin cofactor binding site|Molybdopterin oxidoreductase, prokaryotic, conserved site|Molydopterin dinucleotide-binding domain|Twin-arginine translocation pathway, signal sequence|Twin-arginine translocation pathway, signal sequence, bacterial/archaeal	GO:0009055|GO:0009389|GO:0016491|GO:0030151|GO:0051539|GO:0055114	G3DSA:2.20.25.90|G3DSA:2.40.40.20|G3DSA:3.40.228.10|G3DSA:3.40.50.740|PF00384|PF01568|PF04879|PS00490|PS00551|PS00932|PS51318|PTHR11615|PTHR11615:SF77|SM00926|SSF50692|SSF53706|TIGR01409|TIGR02166
dmsB|dmsB|AP_001525.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001450|IPR014297|IPR017896|IPR017900	4Fe-4S binding domain|4Fe-4S ferredoxin, iron-sulphur binding, conserved site|4Fe-4S ferredoxin-type, iron-sulpur binding domain|Dimethylsulphoxide reductase, chain B	GO:0009055|GO:0051536	G3DSA:3.30.70.20|PF12797|PF13247|PS00198|PS51379|PTHR11938|PTHR11938:SF10|SSF54862|TIGR02951
dmsC|dmsC|AP_001526.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR007059	DMSO reductase anchor subunit (DmsC)	GO:0016021|GO:0019645	PF04976
dmsD|dmsD|AP_002212.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR020945|IPR026269	DMSO/Nitrate reductase chaperone|Tat proofreading chaperone DmsD-type		G3DSA:1.10.3480.10|PF02613|PIRSF004690|SSF89155
dnaA|dnaA|AP_004091.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001957|IPR003593|IPR010921|IPR013159|IPR013317|IPR018312|IPR020591|IPR024633|IPR027417	AAA+ ATPase domain|Chromosomal replication control, initiator (DnaA)/regulator (Hda)|Chromosomal replication control, initiator DnaA|Chromosomal replication control, initiator DnaA, conserved site|Chromosomal replication control, initiator DnaA-like|Chromosomal replication initiator, DnaA C-terminal|DnaA N-terminal domain|P-loop containing nucleoside triphosphate hydrolase|Trp repressor/replication initiator	GO:0000166|GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275|GO:0017111|GO:0043565	G3DSA:1.10.1750.10|G3DSA:1.10.8.60|G3DSA:3.40.50.300|MF_00377|PF00308|PF08299|PF11638|PR00051|PS01008|PTHR30050|PTHR30050:SF0|SM00382|SM00760|SSF48295|SSF52540|TIGR00362
dnaB|dnaB|AP_004553.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003593|IPR007692|IPR007693|IPR007694|IPR016136|IPR027417	AAA+ ATPase domain|DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal|DNA helicase, DnaB type|DNA helicase, DnaB-like, C-terminal|DNA helicase, DnaB-like, N-terminal|P-loop containing nucleoside triphosphate hydrolase	GO:0000166|GO:0003677|GO:0003678|GO:0005524|GO:0006260|GO:0017111	G3DSA:1.10.860.10|G3DSA:3.40.50.300|PF00772|PF03796|PS51199|PTHR30153|PTHR30153:SF0|SM00382|SSF48024|SSF52540|TIGR00665
dnaC|dnaC|AP_004850.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002611|IPR003593|IPR027417	AAA+ ATPase domain|IstB-like ATP-binding protein|P-loop containing nucleoside triphosphate hydrolase	GO:0000166|GO:0005524|GO:0017111	G3DSA:3.40.50.300|PF01695|SM00382|SSF52540
dnaE|dnaE|AP_000844.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003141|IPR004013|IPR004365|IPR004805|IPR011708|IPR012340|IPR016195	Bacterial DNA polymerase III, alpha subunit|DNA polymerase III, alpha subunit|Nucleic acid binding, OB-fold, tRNA/helicase-type|Nucleic acid-binding, OB-fold|PHP, C-terminal|Polymerase/histidinol phosphatase, N-terminal|Polymerase/histidinol phosphatase-like	GO:0003676|GO:0003677|GO:0003824|GO:0003887|GO:0005737|GO:0006260|GO:0008408	G3DSA:1.10.150.280|G3DSA:2.40.50.140|G3DSA:3.20.20.140|PF01336|PF02811|PF07733|PTHR32294|PTHR32294:SF0|SM00481|SSF89550|TIGR00594
dnaG|dnaG|AP_003616.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002694|IPR006171|IPR006295|IPR013173|IPR013264|IPR016136|IPR019475	DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal|DNA primase DnaG, DnaB-binding domain|DNA primase, DnaB-helicase binding domain|DNA primase, DnaG|DNA primase, catalytic core, N-terminal|Toprim domain|Zinc finger, CHC2-type	GO:0003677|GO:0003896|GO:0006260|GO:0006269|GO:0008270|GO:0016779	G3DSA:1.10.860.10|G3DSA:1.20.50.20|G3DSA:3.40.1360.10|G3DSA:3.90.580.10|G3DSA:3.90.980.10|PF01807|PF08275|PF08278|PF10410|PF13662|PIRSF002811|PTHR30313|PTHR30313:SF0|SM00400|SM00493|SM00766|SSF117023|SSF56731|SSF57783|TIGR01391
dnaJ|dnaJ|AP_000679.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001305|IPR001623|IPR002939|IPR008971|IPR012724|IPR018253	Chaperone DnaJ|Chaperone DnaJ, C-terminal|DnaJ domain|DnaJ domain, conserved site|HSP40/DnaJ peptide-binding|Heat shock protein DnaJ, cysteine-rich domain	GO:0005524|GO:0006457|GO:0009408|GO:0031072|GO:0051082	G3DSA:1.10.287.110|G3DSA:2.10.230.10|G3DSA:2.60.260.20|MF_01152|PF00226|PF00684|PF01556|PR00625|PS00636|PS50076|PS51188|PTHR24076|SM00271|SSF46565|SSF49493|SSF57938|TIGR02349
dnaK|dnaK|AP_000678.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR012725|IPR013126	Chaperone DnaK|Heat shock protein 70 family	GO:0005524|GO:0006457|GO:0051082	G3DSA:1.20.1270.10|G3DSA:2.60.34.10|G3DSA:3.30.30.30|G3DSA:3.30.420.40|G3DSA:3.90.640.10|PF00012|PR00301|PTHR19375|PTHR19375:SF1|SSF100920|SSF100934|SSF53067|TIGR02350
dnaN|dnaN|AP_004092.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001001|IPR022634|IPR022635|IPR022637	DNA polymerase III, beta chain|DNA polymerase III, beta chain, C-terminal|DNA polymerase III, beta chain, N-terminal|DNA polymerase III, beta chain, central	GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360	G3DSA:3.10.150.10|PF00712|PF02767|PF02768|PIRSF000804|PTHR30478|SM00480|SSF55979|TIGR00663
dnaQ|dnaQ|AP_000870.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR006054|IPR006055|IPR006309|IPR012337|IPR013520	DNA polymerase 3, epsilon subunit|DNA polymerase III, epsilon subunit|Exonuclease|Exonuclease, RNase T/DNA polymerase III|Ribonuclease H-like domain	GO:0003676|GO:0003677|GO:0003887|GO:0004527|GO:0005622|GO:0006260	G3DSA:3.30.420.10|PF00929|PTHR30231|SM00479|SSF53098|TIGR00573|TIGR01406
dnaT|dnaT|AP_004851.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR020917	Primosomal protein 1	GO:0006260	MF_01061
dnaX|dnaX|AP_001119.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001270|IPR003593|IPR008921|IPR012763|IPR021029|IPR022001|IPR022754|IPR027417	AAA+ ATPase domain|Chaperonin ClpA/B|DNA polymerase III subunit tau, DnaB-binding domain IV|DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal|DNA polymerase III, gamma subunit, domain III|DNA polymerase III, subunit gamma/ tau|DNA polymerase III, tau subunit, domain V|P-loop containing nucleoside triphosphate hydrolase	GO:0000166|GO:0003677|GO:0003887|GO:0005524|GO:0006260|GO:0009360|GO:0017111	G3DSA:1.10.8.60|G3DSA:1.20.272.10|G3DSA:3.40.50.300|PF12168|PF12169|PF12170|PF13177|PR00300|PTHR11669|SM00382|SSF48019|SSF52540|TIGR02397
dos|dos|AP_002112.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000014|IPR000160|IPR000700|IPR001054|IPR001610|IPR001633|IPR012226	Adenylyl cyclase class-3/4/guanylyl cyclase|Diguanylate phosphodiesterase, EAL domain|GGDEF domain|Oxygen sensor diguanylate cyclase/c-di-GMP phosphodiesterase|PAC motif|PAS domain|PAS-associated, C-terminal	GO:0000155|GO:0000160|GO:0004871|GO:0007165|GO:0009190|GO:0016849|GO:0035556	G3DSA:3.20.20.450|G3DSA:3.30.450.20|G3DSA:3.30.70.270|PF00563|PF00990|PF13426|PIRSF005925|PS50112|PS50113|PS50883|PS50887|PTHR24423|PTHR24423:SF354|SM00052|SM00086|SM00091|SM00267|SSF141868|SSF55073|SSF55785|TIGR00229|TIGR00254
dppA|dppA|AP_004249.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000914|IPR023765	Bacterial extracellular solute-binding protein, family 5|Bacterial extracellular solute-binding protein, family 5, conserved site	GO:0005215|GO:0006810	G3DSA:3.10.105.10|G3DSA:3.90.76.10|PF00496|PIRSF002741|PS01040|PTHR30290|PTHR30290:SF0|SSF53850
dppB|dppB|AP_004250.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000515	Binding-protein-dependent transport systems inner membrane component	GO:0005215|GO:0006810|GO:0016020	G3DSA:1.10.3720.10|PF00528|PS50928|PTHR30465|PTHR30465:SF3|SSF161098
dppC|dppC|AP_004251.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000515|IPR025966	Binding-protein-dependent transport systems inner membrane component|Oligopeptide transport permease C-like, N-terminal domain	GO:0005215|GO:0006810|GO:0016020	G3DSA:1.10.3720.10|PF00528|PF12911|PS50928|PTHR30465|PTHR30465:SF1|SSF161098
dppD|dppD|AP_004252.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003439|IPR003593|IPR010066|IPR013563|IPR017871|IPR027417	AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal|Oligopeptide/dipeptide ABC transporter, C-terminal|P-loop containing nucleoside triphosphate hydrolase	GO:0000166|GO:0005524|GO:0015197|GO:0015833|GO:0016020|GO:0016887|GO:0017111	G3DSA:3.40.50.300|PF00005|PF08352|PS00211|PS50893|PTHR24220|PTHR24220:SF132|SM00382|SSF52540|TIGR01727
dppF|dppF|AP_004253.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003439|IPR003593|IPR010066|IPR013563|IPR027417	AAA+ ATPase domain|ABC transporter-like|Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal|Oligopeptide/dipeptide ABC transporter, C-terminal|P-loop containing nucleoside triphosphate hydrolase	GO:0000166|GO:0005524|GO:0015197|GO:0015833|GO:0016020|GO:0016887|GO:0017111	G3DSA:3.40.50.300|PF00005|PF08352|PTHR24220|PTHR24220:SF81|SM00382|SSF52540|TIGR01727
dps|dps|AP_001443.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002177|IPR008331|IPR009078|IPR012347|IPR023067|IPR023188	DNA protection during starvation protein, gammaproteobacteria|DNA-binding protein Dps|DNA-binding protein Dps, conserved site|Ferritin-like superfamily|Ferritin-related|Ferritin/DPS protein domain	GO:0006879|GO:0006950|GO:0008199|GO:0016491|GO:0016722|GO:0046914|GO:0055114	G3DSA:1.20.1260.10|MF_01441|PF00210|PIRSF005900|PR01346|PS00818|PS00819|SSF47240
dsbA|dsbA|AP_003947.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001853|IPR012336|IPR017937|IPR023205	DSBA-like thioredoxin domain|Thiol:disulphide interchange protein Dsba|Thioredoxin, conserved site|Thioredoxin-like fold	GO:0015035|GO:0045454	G3DSA:3.40.30.10|PF01323|PIRSF001488|PS00194|PS51352|SSF52833
dsbB|dsbB|AP_001810.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003752|IPR022920|IPR023380	Disulphide bond formation protein DsbB|Disulphide bond formation protein DsbB-like domain|Disulphide bond formation protein DsbB/BdbC	GO:0015035|GO:0016020	G3DSA:1.20.1550.10|MF_00286|PF02600|SSF158442
dsbC|dsbC|AP_003452.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR009094|IPR012336|IPR017937|IPR018950	Disulphide bond isomerase, DsbC, N-terminal|Disulphide bond isomerase, DsbC/G, N-terminal|Thioredoxin, conserved site|Thioredoxin-like fold	GO:0045454	G3DSA:3.10.450.70|G3DSA:3.40.30.10|PF10411|PF13098|PS00194|PS51352|SSF52833|SSF54423
dsbG|dsbG|AP_001252.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR012336|IPR018950	Disulphide bond isomerase, DsbC/G, N-terminal|Thioredoxin-like fold		G3DSA:3.40.30.10|PF13098|SSF52833|SSF54423
dsdA|dsdA|AP_002966.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000634|IPR001926|IPR011780	D-serine ammonia-lyase|Serine/threonine dehydratase, pyridoxal-phosphate-binding site|Tryptophan synthase beta subunit-like PLP-dependent enzymes superfamily	GO:0006520|GO:0008721|GO:0030170|GO:0046416	G3DSA:3.40.50.1100|MF_01030|PF00291|PS00165|PTHR10314|PTHR10314:SF9|SSF53686|TIGR02035
dsdC|dsdC|AP_002964.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000847|IPR005119|IPR011781|IPR011991	D-serine deaminase transcriptional activator|LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain	GO:0003700|GO:0006355	G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PR00039|PS50931|PTHR30537|PTHR30537:SF0|SSF46785|SSF53850|TIGR02036
dsdX|dsdX|AP_002965.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003474	Gluconate transporter	GO:0015128|GO:0016020|GO:0035429	PF02447|PIRSF002746|PTHR30354|TIGR00791
dsrB|dsrB|AP_002564.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR019717	Dextransucrase DSRB		MF_01549|PF10781
dtd|dtd|AP_003921.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003732|IPR023509	D-Tyr tRNAtyr deacylase-like domain|D-tyrosyl-tRNA(Tyr) deacylase	GO:0005737|GO:0016788|GO:0019478	G3DSA:3.50.80.10|MF_00518|PF02580|PTHR10472|PTHR10472:SF4|SSF69500|TIGR00256
dusB|dusB|AP_003800.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001269|IPR004652|IPR013785|IPR018517|IPR024036	Aldolase-type TIM barrel|tRNA-dihydrouridine synthase|tRNA-dihydrouridine synthase, TIM-barrel, NifR3|tRNA-dihydrouridine synthase, conserved site|tRNA-dihydrouridine synthase, putative, C-terminal	GO:0003824|GO:0008033|GO:0016491|GO:0017150|GO:0050660|GO:0055114	G3DSA:1.10.1200.80|G3DSA:3.20.20.70|PF01207|PIRSF006621|PS01136|PTHR11082|PTHR11082:SF9|SSF51395|TIGR00737
dusC|dusC|AP_002737.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001269|IPR013785|IPR018517	Aldolase-type TIM barrel|tRNA-dihydrouridine synthase|tRNA-dihydrouridine synthase, conserved site	GO:0003824|GO:0008033|GO:0017150|GO:0050660|GO:0055114	G3DSA:3.20.20.70|PF01207|PIRSF006621|PS01136|PTHR11082|PTHR11082:SF9|SSF51395
dut|dut|AP_004151.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR008180|IPR008181	DeoxyUTP pyrophosphatase|DeoxyUTP pyrophosphatase, dUTPase subfamily	GO:0004170|GO:0016787|GO:0046080	G3DSA:2.70.40.10|MF_00116|PF00692|PTHR11241|PTHR11241:SF0|SSF51283|TIGR00576
dxr|dxr|AP_000833.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003821|IPR013512|IPR013644|IPR016040|IPR026877	1-deoxy-D-xylulose 5-phosphate reductoisomerase|1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal|1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal|DXP reductoisomerase C-terminal domain|NAD(P)-binding domain	GO:0005515|GO:0008299|GO:0030604|GO:0046872|GO:0055114|GO:0070402	G3DSA:1.10.1740.10|G3DSA:3.40.50.720|MF_00183|PF02670|PF08436|PF13288|PIRSF006205|PS51257|PTHR30525|PTHR30525:SF0|SSF51735|SSF55347|SSF69055|TIGR00243
dxs|dxs|AP_001070.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR005474|IPR005475|IPR005476|IPR005477|IPR009014|IPR015941|IPR020826	Deoxyxylulose-5-phosphate synthase|Transketolase binding site|Transketolase, C-terminal|Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II|Transketolase, N-terminal|Transketolase-like, C-terminal|Transketolase-like, pyrimidine-binding domain	GO:0003824|GO:0008152|GO:0008661|GO:0016114	G3DSA:3.40.50.920|G3DSA:3.40.50.970|MF_00315|PF02779|PF02780|PF13292|PS00801|PS00802|PTHR11624|PTHR11624:SF20|SM00861|SSF52518|SSF52922|TIGR00204
eaeH|eaeH|AP_000952.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003535|IPR024519	Domain of unknown function DUF3442, intimin/invasin|Intimin/invasin bacterial adhesion mediator protein	GO:0007155	PF11924|PR01369
eamA|eamA|AP_002154.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000620	Drug/metabolite transporter	GO:0016020	PF00892|PTHR32322|PTHR32322:SF0|SSF103481
ebgA|ebgA|AP_003625.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004199|IPR006101|IPR006102|IPR006103|IPR006104|IPR008979|IPR011013|IPR013781|IPR013812|IPR014718|IPR017853|IPR023230|IPR023232	Beta galactosidase small chain/ domain 5|Galactose mutarotase-like domain|Galactose-binding domain-like|Glycoside hydrolase, catalytic domain|Glycoside hydrolase, family 2|Glycoside hydrolase, family 2, N-terminal|Glycoside hydrolase, family 2, TIM barrel|Glycoside hydrolase, family 2, active site|Glycoside hydrolase, family 2, conserved site|Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich|Glycoside hydrolase, family 2/20, immunoglobulin-like beta-sandwich domain|Glycoside hydrolase, superfamily|Glycoside hydrolase-type carbohydrate-binding, subgroup	GO:0003824|GO:0004553|GO:0004565|GO:0005975|GO:0009341|GO:0030246	G3DSA:2.60.120.260|G3DSA:2.60.40.320|G3DSA:2.70.98.10|G3DSA:3.20.20.80|PF00703|PF02836|PF02837|PF02929|PR00132|PS00608|PS00719|PTHR10066|PTHR10066:SF41|SM01038|SSF49303|SSF49785|SSF51445|SSF74650
ebgC|ebgC|AP_003626.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004375	Conserved hypothetical protein CHP00022		G3DSA:2.60.120.370|PF04074|SSF51197
ebgR|ebgR|AP_003624.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000843|IPR010982	Lambda repressor-like, DNA-binding domain|Transcription regulator HTH, LacI	GO:0003677|GO:0003700|GO:0005622|GO:0006355	G3DSA:1.10.260.40|G3DSA:3.40.50.2300|PF00356|PF13377|PR00036|PS00356|PS50932|PTHR30146|PTHR30146:SF6|SM00354|SSF47413|SSF53822
ecnA|ecnA|AP_004649.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR012556	Entericidin EcnAB	GO:0009636|GO:0016020	PF08085|PS51257
ecnB|ecnB|AP_004650.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR012556	Entericidin EcnAB	GO:0009636|GO:0016020	PF08085|PS51257
eco|eco|AP_002805.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR005658|IPR023084|IPR023189|IPR027438	Ecotin, C-terminal|Proteinase inhibitor I11, ecotin|Proteinase inhibitor I11, ecotin domain|Proteinase inhibitor I11, ecotin, gammaproteobacteria		G3DSA:2.60.40.550|G3DSA:4.10.1230.10|MF_00706|PF03974|PIRSF006865|SSF49772
ecpD|ecpD|AP_000801.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001829|IPR008962|IPR016147|IPR016148|IPR018046	PapD-like|Pili assembly chaperone, C-terminal domain|Pili assembly chaperone, N-terminal, bacterial|Pili assembly chaperone, bacterial|Pili assembly chaperone, conserved site	GO:0030288|GO:0043711|GO:0071555	G3DSA:2.60.40.1070|G3DSA:2.60.40.360|PF00345|PF02753|PR00969|PS00635|PTHR30251|SSF49354|SSF49584
eda|eda|AP_002470.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000887|IPR013785	Aldolase-type TIM barrel|KDPG/KHG aldolase	GO:0003824|GO:0008152|GO:0016829	G3DSA:3.20.20.70|PF01081|PS00159|PS00160|PTHR30246|PTHR30246:SF0|SSF51569|TIGR01182
edd|edd|AP_002471.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000581|IPR004786|IPR015928|IPR020558	6-phosphogluconate dehydratase|Aconitase/3-isopropylmalate dehydratase, swivel|Dihydroxy-acid/6-phosphogluconate dehydratase|Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site	GO:0003824|GO:0004456|GO:0008152|GO:0009255	PF00920|PS00886|PS00887|PTHR21000|SSF143975|SSF52016|TIGR01196
efp|efp|AP_004648.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001059|IPR008991|IPR011768|IPR012340|IPR013185|IPR013852|IPR014722|IPR015365|IPR020599	Elongation factor P, C-terminal|Nucleic acid-binding, OB-fold|Ribosomal protein L2 domain 2|Translation elongation factor P|Translation elongation factor P/YeiP|Translation elongation factor P/YeiP, central|Translation elongation factor P/YeiP, conserved site|Translation elongation factor, KOW-like|Translation protein SH3-like domain	GO:0003746|GO:0005737|GO:0006414|GO:0043043	G3DSA:2.30.30.30|G3DSA:2.40.50.140|MF_00141|PF01132|PF08207|PF09285|PIRSF005901|PS01275|PTHR30053|SM00841|SSF50104|SSF50249|TIGR00038
ego|ego|AP_002134.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003439|IPR003593|IPR017871|IPR027417	AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase	GO:0000166|GO:0005524|GO:0016887|GO:0017111	G3DSA:3.40.50.300|PF00005|PS00211|PS50893|PTHR24220|PTHR24220:SF169|SM00382|SSF52540
elaA|elaA|AP_002865.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000182|IPR016181	Acyl-CoA N-acyltransferase|GNAT domain	GO:0008080	G3DSA:3.40.630.30|PF00583|PS51186|SSF55729
elaB|elaB|AP_002864.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR010279	Protein of unknown function DUF883, ElaB		PF05957
elaC|elaC|AP_002866.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001279|IPR013469|IPR013471	Beta-lactamase-like|Ribonuclease BN|Ribonuclease Z	GO:0016787|GO:0016891|GO:0042779	G3DSA:3.60.15.10|MF_01818|PF12706|PTHR12553|PTHR12553:SF12|SM00849|SSF56281|TIGR02649|TIGR02651
elaD|elaD|AP_002867.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003653	Peptidase C48, SUMO/Sentrin/Ubl1	GO:0006508|GO:0008234	PF02902|SSF54001
elbA|elbA|AP_001785.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR014448	Anti-adapter protein IraM	GO:0005737|GO:0006950	MF_01199|PIRSF007036
elbB|elbB|AP_003752.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002818|IPR026041	Enhancing lycopene biosynthesis protein 2|ThiJ/PfpI		G3DSA:3.40.50.880|PF01965|PIRSF006320|PTHR32270|PTHR32270:SF2|SSF52317
emrA|emrA|AP_003257.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR005694|IPR006143	Efflux pump membrane protein Emr|RND efflux pump, membrane fusion protein	GO:0006855|GO:0009276|GO:0015238|GO:0016020|GO:0055085	G3DSA:2.40.50.100|PF00529|PTHR30386|PTHR30386:SF0|SSF111369|TIGR00998
emrB|emrB|AP_003258.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004638|IPR011701|IPR016196|IPR020846	Drug resistance transporter EmrB/QacA subfamily|Major facilitator superfamily|Major facilitator superfamily domain|Major facilitator superfamily domain, general substrate transporter	GO:0006810|GO:0016021|GO:0055085	G3DSA:1.20.1250.20|PF07690|PS50850|PTHR24003|PTHR24003:SF124|SSF103473|TIGR00711
emrD|emrD|AP_004119.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004734|IPR011701|IPR016196|IPR020846	Major facilitator superfamily|Major facilitator superfamily domain|Major facilitator superfamily domain, general substrate transporter|Multidrug resistance protein	GO:0015238|GO:0015893|GO:0016021|GO:0055085	G3DSA:1.20.1250.20|PF07690|PS50850|PTHR24003|SSF103473|TIGR00880
emrE|emrE|AP_001188.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000390	Small multidrug resistance protein family	GO:0016021	PF00893|PTHR30561|PTHR30561:SF0|SSF103481
emrK|emrK|AP_002968.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR005694|IPR006143	Efflux pump membrane protein Emr|RND efflux pump, membrane fusion protein	GO:0006855|GO:0009276|GO:0015238|GO:0016020|GO:0055085	G3DSA:2.40.50.100|PF00529|PTHR30386|PTHR30386:SF0|SSF111369|TIGR00998
emrY|emrY|AP_002967.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004638|IPR011701|IPR016196|IPR020846	Drug resistance transporter EmrB/QacA subfamily|Major facilitator superfamily|Major facilitator superfamily domain|Major facilitator superfamily domain, general substrate transporter	GO:0006810|GO:0016021|GO:0055085	G3DSA:1.20.1250.20|PF07690|PS50850|PTHR24003|SSF103473|TIGR00711
emtA|emtA|AP_001818.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000189|IPR008258|IPR023346|IPR023946	Endo-type membrane-bound lytic murein transglycosylase A|Lysozyme-like domain|Lytic transglycosylase-like, catalytic|Prokaryotic transglycosylase, active site	GO:0000270|GO:0008932|GO:0008933|GO:0009279|GO:0016020|GO:0016837|GO:0016998	G3DSA:1.10.530.10|MF_01381|PF01464|PS00922|PS51257|PTHR21666|PTHR21666:SF57|SSF53955
endA|endA|AP_003502.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR007346	Endonuclease I	GO:0004518	PF04231|SSF54060
eno|eno|AP_003345.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000941|IPR020809|IPR020810|IPR020811	Enolase|Enolase, C-terminal|Enolase, N-terminal|Enolase, conserved site	GO:0000015|GO:0000287|GO:0004634|GO:0006096	G3DSA:3.20.20.120|G3DSA:3.30.390.10|MF_00318|PF00113|PF03952|PIRSF001400|PR00148|PS00164|PTHR11902|SSF51604|SSF54826|TIGR01060
entA|entA|AP_001243.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002198|IPR003560|IPR016040|IPR020904	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase|NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR|Short-chain dehydrogenase/reductase, conserved site	GO:0008152|GO:0008667|GO:0016491|GO:0019290|GO:0055114	G3DSA:3.40.50.720|PF13561|PR00080|PR01397|PS00061|PTHR24322|SSF51735|TIGR04316
entB|entB|AP_001242.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000868|IPR009081|IPR016291	Acyl carrier protein-like|Isochorismatase|Isochorismatase-like	GO:0003824|GO:0008152|GO:0008908	G3DSA:1.10.1200.10|G3DSA:3.40.50.850|PF00550|PF00857|PIRSF001111|PR01398|PS50075|PTHR11080|PTHR11080:SF4|SSF47336|SSF52499
entC|entC|AP_001240.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004561|IPR005801|IPR015890	ADC synthase|Chorismate binding, C-terminal|Isochorismate synthase	GO:0008909|GO:0009058	G3DSA:3.60.120.10|PF00425|PTHR11236|PTHR11236:SF3|SSF56322|TIGR00543
entD|entD|AP_001229.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003542|IPR008278	4'-phosphopantetheinyl transferase superfamily|Enterobactin synthetase-like, component D	GO:0000287|GO:0008897|GO:0009059|GO:0009239|GO:0009366|GO:0016780	G3DSA:3.90.470.20|PF01648|PR01399|SSF56214
entE|entE|AP_001241.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000873|IPR011963|IPR020845|IPR025110	2,3-dihydroxybenzoate-AMP ligase|AMP-binding, conserved site|AMP-dependent synthetase/ligase|Domain of unknown function DUF4009	GO:0003824|GO:0008152|GO:0008668|GO:0019290	G3DSA:2.30.38.10|G3DSA:3.30.300.30|G3DSA:3.40.50.980|PF00501|PF13193|PS00455|PTHR24095|PTHR24095:SF35|SSF56801|TIGR02275
entF|entF|AP_001233.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000873|IPR001031|IPR001242|IPR006162|IPR009081|IPR010071|IPR020845	AMP-binding, conserved site|AMP-dependent synthetase/ligase|Acyl carrier protein-like|Amino acid adenylation domain|Condensation domain|Phosphopantetheine attachment site|Thioesterase	GO:0003824|GO:0008152|GO:0009058|GO:0016788	G3DSA:1.10.1200.10|G3DSA:2.30.38.10|G3DSA:3.30.300.30|G3DSA:3.40.50.1820|G3DSA:3.40.50.980|PF00501|PF00550|PF00668|PF00975|PS00012|PS00455|PS50075|PTHR24095|PTHR24095:SF43|SSF47336|SSF52777|SSF53474|SSF56801|TIGR01733
envC|envC|AP_004178.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR011055|IPR016047	Duplicated hybrid motif|Peptidase M23		G3DSA:2.70.70.10|PF01551|PTHR21666|PTHR21666:SF7|SSF51261
envR|envR|AP_003804.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001647|IPR009057|IPR011075|IPR013572|IPR015893|IPR023772	DNA-binding HTH domain, TetR-type|DNA-binding HTH domain, TetR-type, conserved site|Homeodomain-like|Tetracycline transcriptional regulator, TetR-like, C-terminal|Tetracycline transcriptional regulator, TetR-related, C-terminal|Transcription regulator MAATS, C-terminal	GO:0003677	G3DSA:1.10.10.60|G3DSA:1.10.357.10|PF00440|PF08361|PR00455|PS01081|PS50977|SSF46689|SSF48498
envY|envY|AP_001211.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR009057|IPR018060|IPR018062|IPR020449	DNA binding HTH domain, AraC-type|HTH domain AraC-type, conserved site|Homeodomain-like|Transcription regulator HTH, AraC- type	GO:0003677|GO:0003700|GO:0005622|GO:0006355|GO:0043565	G3DSA:1.10.10.60|PF00165|PR00032|PS00041|PS01124|PTHR11019|PTHR11019:SF11|SM00342|SSF46689
envZ|envZ|AP_004386.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003594|IPR003660|IPR003661|IPR004358|IPR005467|IPR009082	HAMP linker domain|Histidine kinase-like ATPase, ATP-binding domain|Signal transduction histidine kinase, core|Signal transduction histidine kinase, homodimeric domain|Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal	GO:0000155|GO:0004871|GO:0005524|GO:0007165|GO:0016020|GO:0016021|GO:0016310|GO:0016772	G3DSA:1.10.287.130|G3DSA:3.30.565.10|PF00512|PF00672|PF02518|PR00344|PS50109|PS50885|PTHR24423|SM00304|SM00387|SM00388|SSF47384|SSF55874
epd|epd|AP_003485.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR006422|IPR016040|IPR020828|IPR020829|IPR020830|IPR020831	D-erythrose-4-phosphate dehydrogenase|Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain|Glyceraldehyde 3-phosphate dehydrogenase, active site|Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain|Glyceraldehyde/Erythrose phosphate dehydrogenase family|NAD(P)-binding domain	GO:0005737|GO:0016620|GO:0042823|GO:0048001|GO:0051287|GO:0055114	G3DSA:3.30.360.10|G3DSA:3.40.50.720|MF_01640|PF00044|PF02800|PIRSF000149|PR00078|PS00071|PTHR10836|PTHR10836:SF24|SM00846|SSF51735|SSF55347|TIGR01532
eptA|eptA|AP_004615.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000917|IPR012549|IPR017849|IPR017850	Alkaline phosphatase-like, alpha/beta/alpha|Alkaline-phosphatase-like, core domain|Domain of unknown function DUF1705|Sulfatase	GO:0003824|GO:0008152|GO:0008484|GO:0016021	G3DSA:3.40.720.10|PF00884|PF08019|PTHR30443|PTHR30443:SF0|SSF53649
eptB|eptB|AP_004248.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000917|IPR012549|IPR017849|IPR017850	Alkaline phosphatase-like, alpha/beta/alpha|Alkaline-phosphatase-like, core domain|Domain of unknown function DUF1705|Sulfatase	GO:0003824|GO:0008152|GO:0008484|GO:0016021	G3DSA:3.40.720.10|PF00884|PF08019|PTHR30443|PTHR30443:SF0|SSF53649
era|era|AP_003152.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004044|IPR005225|IPR005662|IPR006073|IPR009019|IPR015946|IPR027417	GTP binding domain|GTP-binding protein Era|K Homology domain, type 2|K homology domain, prokaryotic type|K homology domain-like, alpha/beta|P-loop containing nucleoside triphosphate hydrolase|Small GTP-binding protein domain	GO:0003723|GO:0005525|GO:0005622	G3DSA:3.30.300.20|G3DSA:3.40.50.300|MF_00367|PF01926|PF07650|PS50823|PTHR11649|PTHR11649:SF3|SSF52540|SSF54814|TIGR00231|TIGR00436
erfK|erfK|AP_002591.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR005490	L,D-transpeptidase catalytic domain	GO:0016740	G3DSA:2.40.440.10|PF03734|PTHR30582|PTHR30582:SF0|SSF141523
essD|essD|AP_001199.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR007054	Lysis protein S		PF04971|PIRSF030786
essQ|essQ|AP_002178.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR007054	Lysis protein S		PF04971|PIRSF030786
etp|etp|AP_001611.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000106|IPR017867|IPR023485	Phosphotyrosine protein phosphatase I superfamily|Protein-tyrosine phosphatase, low molecular weight|Protein-tyrosine phosphatase/arsenate reductase	GO:0004725|GO:0006470	G3DSA:3.40.50.270|PF01451|PR00719|PTHR11717|PTHR11717:SF7|SM00226|SSF52788
eutA|eutA|AP_003036.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR009377	Ethanolamine utilisation EutA		G3DSA:3.30.420.40|PF06277|PIRSF012293|SSF53067
eutB|eutB|AP_003035.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR010628|IPR013785	Aldolase-type TIM barrel|Ethanolamine ammonia lyase large subunit	GO:0003824|GO:0006520|GO:0008851	G3DSA:1.10.220.70|G3DSA:2.30.170.30|G3DSA:3.20.20.70|PF06751|PIRSF018788|PTHR30493
eutC|eutC|AP_003034.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR009246	Ethanolamine ammonia-lyase light chain	GO:0006520|GO:0008851	MF_00601|PF05985|PIRSF018982|PTHR30051|PTHR30051:SF0
eutE|eutE|AP_003040.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR012408|IPR015590|IPR016161|IPR016162|IPR016163	Acetaldehyde/propionaldehyde dehydrogenase, EutE/PduP-related|Aldehyde dehydrogenase domain|Aldehyde dehydrogenase, C-terminal|Aldehyde dehydrogenase, N-terminal|Aldehyde/histidinol dehydrogenase	GO:0008152|GO:0016491|GO:0016620|GO:0055114	G3DSA:3.40.309.10|G3DSA:3.40.605.10|PF00171|PIRSF036410|PTHR11699|PTHR11699:SF68|SSF53720
eutG|eutG|AP_003038.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001670|IPR018211	Alcohol dehydrogenase, iron-type|Alcohol dehydrogenase, iron-type, conserved site	GO:0016491|GO:0046872|GO:0055114	G3DSA:1.20.1090.10|G3DSA:3.40.50.1970|PF00465|PS00060|PS00913|PTHR11496|PTHR11496:SF46|SSF56796
eutH|eutH|AP_003037.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR007441	Ethanolamine utilisation protein EutH	GO:0016021|GO:0034228|GO:0034229	PF04346|PIRSF019466
eutI|eutI|AP_003043.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002505|IPR004614|IPR012147	Phosphate acetyl/butaryl transferase|Phosphate acetyl/butyryltransferase|Phosphate acetyltransferase	GO:0008152|GO:0016407|GO:0016746	G3DSA:3.40.50.10750|PF01515|PIRSF000428|PTHR23406|PTHR23406:SF3|SSF53659|TIGR00651
eutJ|eutJ|AP_003039.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR013366	Ethanolamine utilisation EutJ		G3DSA:3.30.420.40|SSF53067|TIGR02529
eutL|eutL|AP_003033.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000249|IPR009193	Microcompartment protein, bacteria|Polyhedral organelle shell protein, EutL/PduB type	GO:0009605	PF00936|PIRSF012290|SM00877|SSF143414
eutP|eutP|AP_003046.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR012381|IPR027417	Ethanolamine/propanediol utilisation protein, EutP/PduV|P-loop containing nucleoside triphosphate hydrolase	GO:0005524|GO:0006576	G3DSA:3.40.50.300|PF10662|PIRSF036409|SSF52540|TIGR02528
eutQ|eutQ|AP_003045.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR010424|IPR011051|IPR014710	Ethanolamine utilisation EutQ|RmlC-like cupin domain|RmlC-like jelly roll fold		G3DSA:2.60.120.10|PF06249|SSF51182
eutT|eutT|AP_003044.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR009194|IPR016030	Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase, EutT-type|Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase-like	GO:0005524|GO:0006580|GO:0008817|GO:0009236	G3DSA:1.20.1200.10|PF01923|PIRSF012294|SSF89028
evgA|evgA|AP_002969.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000792|IPR001789|IPR011006|IPR011991|IPR016032	CheY-like superfamily|Signal transduction response regulator, C-terminal effector|Signal transduction response regulator, receiver domain|Transcription regulator LuxR, C-terminal|Winged helix-turn-helix DNA-binding domain	GO:0000156|GO:0000160|GO:0003677|GO:0003700|GO:0005622|GO:0006355|GO:0043565	G3DSA:1.10.10.10|G3DSA:3.40.50.2300|PF00072|PF00196|PR00038|PTHR26402|PTHR26402:SF107|SM00421|SM00448|SSF46894|SSF52172
evgS|evgS|AP_002970.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001638|IPR001789|IPR003594|IPR003661|IPR004358|IPR005467|IPR008207|IPR009082|IPR011006	CheY-like superfamily|Extracellular solute-binding protein, family 3|Histidine kinase-like ATPase, ATP-binding domain|Signal transduction histidine kinase, core|Signal transduction histidine kinase, homodimeric domain|Signal transduction histidine kinase, phosphotransfer (Hpt) domain|Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal|Signal transduction response regulator, receiver domain	GO:0000155|GO:0000156|GO:0000160|GO:0004871|GO:0005215|GO:0005524|GO:0006355|GO:0006810|GO:0007165|GO:0016020|GO:0016310|GO:0016772|GO:0030288	G3DSA:1.10.287.130|G3DSA:1.20.120.160|G3DSA:3.30.565.10|G3DSA:3.40.190.10|G3DSA:3.40.50.2300|PF00072|PF00497|PF00512|PF01627|PF02518|PR00344|PS50109|PS50110|PS50894|PTHR24423|PTHR24423:SF260|SM00062|SM00073|SM00387|SM00388|SM00448|SSF47226|SSF47384|SSF52172|SSF53850|SSF55874
exbB|exbB|AP_003558.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002898|IPR014164	MotA/TolQ/ExbB proton channel|TonB-system energizer ExbB type-1	GO:0006810|GO:0008565|GO:0016020	PF01618|PTHR30572|PTHR30572:SF2|TIGR02797
exbD|exbD|AP_003557.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003400|IPR014170	Biopolymer transport protein ExbD/TolR|TonB system transport protein ExbD type-1	GO:0005215|GO:0006810|GO:0016020	PF02472|PTHR30558|PTHR30558:SF0|TIGR02803
exoX|exoX|AP_002464.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR006055|IPR012337|IPR013520	Exonuclease|Exonuclease, RNase T/DNA polymerase III|Ribonuclease H-like domain	GO:0003676|GO:0004527|GO:0005622	G3DSA:3.30.420.10|PF00929|SM00479|SSF53098
exo|exo|AP_003364.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002421|IPR008918|IPR020045|IPR020046|IPR022895	5'-3' exonuclease, C-terminal domain|5'-3' exonuclease, N-terminal|5'-3' exonuclease, alpha-helical arch, N-terminal|Helix-hairpin-helix motif, class 2|Uncharacterised protein family YgdG	GO:0003677|GO:0003824|GO:0008409	G3DSA:1.10.150.20|G3DSA:3.40.50.1010|MF_01192|PF01367|PF02739|PTHR10133|SM00279|SM00475|SSF47807|SSF88723
exuR|exuR|AP_003643.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000524|IPR008920|IPR011711|IPR011991|IPR027376	FadR/GntR C-terminal domain|Fatty acid responsive transcription factor FadR, C-terminal|GntR, C-terminal|Transcription regulator HTH, GntR|Winged helix-turn-helix DNA-binding domain	GO:0000062|GO:0003677|GO:0003700|GO:0005622|GO:0006355|GO:0019217	G3DSA:1.10.10.10|G3DSA:1.20.120.530|PF00392|PF07729|PR00035|PTHR11751|PTHR11751:SF180|SM00345|SM00895|SSF46785|SSF48008
exuT|exuT|AP_003642.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004744|IPR011701|IPR016196|IPR020846	D-galactonate transporter|Major facilitator superfamily|Major facilitator superfamily domain|Major facilitator superfamily domain, general substrate transporter	GO:0005215|GO:0006810|GO:0016021|GO:0055085	G3DSA:1.20.1250.20|PF07690|PS50850|PTHR11662|PTHR11662:SF18|SSF103473|TIGR00893
fabA|fabA|AP_001584.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR010083|IPR013114	Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA|Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase, FabA/FabZ	GO:0005737|GO:0006633|GO:0008693	G3DSA:3.10.129.10|MF_00405|PF07977|PTHR11712|SSF54637|TIGR01749
fabB|fabB|AP_002923.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR014030|IPR014031|IPR016038|IPR016039|IPR018201	Beta-ketoacyl synthase, C-terminal|Beta-ketoacyl synthase, N-terminal|Beta-ketoacyl synthase, active site|Thiolase-like|Thiolase-like, subgroup	GO:0003824|GO:0008152	G3DSA:3.40.47.10|PF00109|PF02801|PS00606|PTHR11712|PTHR11712:SF110|SSF53901
fabD|fabD|AP_001718.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001227|IPR004410|IPR014043|IPR016035|IPR016036|IPR024925	Acyl transferase|Acyl transferase domain|Acyl transferase/acyl hydrolase/lysophospholipase|Malonyl CoA-acyl carrier protein transacylase|Malonyl CoA-acyl carrier protein transacylase, FabD-type|Malonyl-CoA ACP transacylase, ACP-binding	GO:0003824|GO:0004314|GO:0005515|GO:0008152|GO:0016740	G3DSA:3.30.70.250|G3DSA:3.40.366.10|PF00698|PIRSF000446|PTHR10982|SSF52151|SSF55048|TIGR00128
fabF|fabF|AP_001721.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR014030|IPR014031|IPR016038|IPR016039|IPR017568|IPR018201	3-oxoacyl-[acyl-carrier-protein] synthase 2|Beta-ketoacyl synthase, C-terminal|Beta-ketoacyl synthase, N-terminal|Beta-ketoacyl synthase, active site|Thiolase-like|Thiolase-like, subgroup	GO:0003824|GO:0006633|GO:0008152|GO:0016747	G3DSA:3.40.47.10|PF00109|PF02801|PIRSF000447|PS00606|PTHR11712|SSF53901|TIGR03150
fabG|fabG|AP_001719.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002198|IPR002347|IPR011284|IPR016040|IPR020904	3-oxoacyl-(acyl-carrier-protein) reductase|Glucose/ribitol dehydrogenase|NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR|Short-chain dehydrogenase/reductase, conserved site	GO:0004316|GO:0006633|GO:0008152|GO:0016491|GO:0051287|GO:0055114	G3DSA:3.40.50.720|PF00106|PR00080|PR00081|PS00061|PTHR24316|PTHR24316:SF3|SSF51735|TIGR01830
fabH|fabH|AP_001717.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004655|IPR013747|IPR013751|IPR016038|IPR016039	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III|3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal|3-oxoacyl-[acyl-carrier-protein] synthase 3|Thiolase-like|Thiolase-like, subgroup	GO:0003824|GO:0004315|GO:0006633|GO:0008152|GO:0008610|GO:0016747	G3DSA:3.40.47.10|MF_01815|PF08541|PF08545|PTHR32442|PTHR32442:SF0|SSF53901|TIGR00747
fabI|fabI|AP_001914.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002347|IPR014358|IPR016040	Enoyl-[acyl-carrier-protein] reductase (NADH)|Glucose/ribitol dehydrogenase|NAD(P)-binding domain	GO:0004318|GO:0006633|GO:0055114	G3DSA:3.40.50.720|PF13561|PIRSF000094|PR00081|PTHR24311|PTHR24311:SF0|SSF51735
fabR|fabR|AP_003847.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001647|IPR009057|IPR015893|IPR023764	DNA-binding HTH domain, TetR-type|Homeodomain-like|Tetracycline transcriptional regulator, TetR-like, C-terminal|Transcriptional repressor HTH, FabR	GO:0003677	G3DSA:1.10.357.10|MF_01190|PF00440|PS50977|SSF46689
fabZ|fabZ|AP_000840.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR010084|IPR013114	Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ|Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase, FabA/FabZ	GO:0005737|GO:0006633|GO:0016836	G3DSA:3.10.129.10|MF_00406|PF07977|PTHR30272|PTHR30272:SF0|SSF54637|TIGR01750
fadA|fadA|AP_003957.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002155|IPR012805|IPR016038|IPR016039|IPR020610|IPR020613|IPR020615|IPR020616|IPR020617	Acetyl-CoA C-acyltransferase FadA|Thiolase|Thiolase, C-terminal|Thiolase, N-terminal|Thiolase, active site|Thiolase, acyl-enzyme intermediate active site|Thiolase, conserved site|Thiolase-like|Thiolase-like, subgroup	GO:0003824|GO:0003988|GO:0005737|GO:0006631|GO:0008152|GO:0016042|GO:0016747	G3DSA:3.40.47.10|MF_01620|PF00108|PF02803|PIRSF000429|PS00098|PS00099|PS00737|PTHR18919|PTHR18919:SF27|SSF53901|TIGR01930|TIGR02445
fadB|fadB|AP_003956.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001753|IPR006108|IPR006176|IPR006180|IPR008927|IPR012799|IPR013328|IPR016040|IPR018376	3-hydroxyacyl-CoA dehydrogenase, C-terminal|3-hydroxyacyl-CoA dehydrogenase, NAD binding|3-hydroxyacyl-CoA dehydrogenase, conserved site|6-phosphogluconate dehydrogenase, C-terminal-like|Crotonase superfamily|Dehydrogenase, multihelical|Enoyl-CoA hydratase/isomerase, conserved site|Fatty oxidation complex, alpha subunit FadB|NAD(P)-binding domain	GO:0003824|GO:0003857|GO:0004165|GO:0004300|GO:0006631|GO:0008152|GO:0008692|GO:0009062|GO:0016042|GO:0016491|GO:0016616|GO:0050662|GO:0055114	G3DSA:1.10.1040.10|G3DSA:3.40.50.720|G3DSA:3.90.226.10|MF_01621|PF00378|PF00725|PF02737|PS00067|PS00166|PTHR23309|SSF48179|SSF51735|SSF52096|TIGR02437
fadD|fadD|AP_002424.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000873|IPR025110	AMP-dependent synthetase/ligase|Domain of unknown function DUF4009	GO:0003824|GO:0008152	G3DSA:2.30.38.10|G3DSA:3.30.300.30|G3DSA:3.40.50.980|PF00501|PF13193|PTHR24096|PTHR24096:SF13|SSF56801
fadE|fadE|AP_000876.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR006090|IPR006091|IPR006092|IPR009075|IPR009100|IPR013786|IPR015396	Acyl-CoA dehydrogenase, C-termina, bacterial type|Acyl-CoA dehydrogenase, N-terminal|Acyl-CoA dehydrogenase/oxidase|Acyl-CoA dehydrogenase/oxidase C-terminal|Acyl-CoA dehydrogenase/oxidase, N-terminal|Acyl-CoA oxidase/dehydrogenase, central domain|Acyl-CoA oxidase/dehydrogenase, type 1	GO:0003995|GO:0008152|GO:0016627|GO:0033539|GO:0050660|GO:0055114	G3DSA:1.10.540.10|G3DSA:1.20.140.10|G3DSA:2.40.110.10|PF00441|PF02770|PF02771|PF09317|PTHR10909|PTHR10909:SF97|SSF47203|SSF56645
fadH|fadH|AP_003630.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001155|IPR013027|IPR013785|IPR023753	Aldolase-type TIM barrel|FAD-dependent pyridine nucleotide-disulphide oxidoreductase|NADH:flavin oxidoreductase/NADH oxidase, N-terminal|Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain	GO:0003824|GO:0010181|GO:0016491|GO:0055114	G3DSA:3.20.20.70|G3DSA:3.50.50.60|PF00724|PF07992|PR00368|PR00411|PTHR22893|PTHR22893:SF25|SSF51395|SSF51905|SSF51971
fadL|fadL|AP_002944.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR005017	Membrane protein, aromatic hydrocarbon degradation		G3DSA:2.40.160.60|PF03349|SSF56935
fadR|fadR|AP_001812.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000524|IPR008920|IPR011991|IPR014178|IPR027376	FadR/GntR C-terminal domain|Fatty acid response transcription factor FadR|Fatty acid responsive transcription factor FadR, C-terminal|Transcription regulator HTH, GntR|Winged helix-turn-helix DNA-binding domain	GO:0000062|GO:0003677|GO:0003700|GO:0005622|GO:0006355|GO:0019217	G3DSA:1.10.10.10|G3DSA:1.20.120.530|MF_00696|PF00392|PF07840|PR00035|PS50949|PTHR11751|SM00345|SSF46785|SSF48008|TIGR02812
fbaA|fbaA|AP_003483.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000771|IPR006411|IPR013785	Aldolase-type TIM barrel|Fructose-bisphosphate aldolase, class II, yeast/E. coli subtype|Ketose-bisphosphate aldolase, class-II	GO:0003824|GO:0004332|GO:0005975|GO:0006096|GO:0008270|GO:0016832	G3DSA:3.20.20.70|PF01116|PIRSF001359|PS00602|PS00806|PTHR30559|PTHR30559:SF0|SSF51569|TIGR00167|TIGR01520
fbaB|fbaB|AP_002695.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002915|IPR013785	Aldolase-type TIM barrel|DeoC/FbaB/ lacD aldolase	GO:0003824|GO:0016829	G3DSA:3.20.20.70|PF01791|PTHR30526|PTHR30526:SF0|SSF51569
fbp|fbp|AP_004731.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000146|IPR020548	Fructose-1,6-bisphosphatase class 1/Sedoheputulose-1,7-bisphosphatase|Fructose-1,6-bisphosphatase, active site	GO:0005975|GO:0042132|GO:0042578	G3DSA:3.30.540.10|G3DSA:3.40.190.80|MF_01855|PF00316|PIRSF000904|PR00115|PS00124|PTHR11556|PTHR11556:SF1|SSF56655
fcl|fcl|AP_002652.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001509|IPR016040	NAD(P)-binding domain|NAD-dependent epimerase/dehydratase	GO:0003824|GO:0044237|GO:0050662	G3DSA:3.40.50.720|G3DSA:3.90.25.10|PF01370|PTHR10366|PTHR10366:SF27|SSF51735
fdhD|fdhD|AP_003913.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003786|IPR016193	Cytidine deaminase-like|Formate dehydrogenase, subunit FdhD	GO:0003824|GO:0008863|GO:0009326	G3DSA:3.10.20.10|G3DSA:3.40.140.10|MF_00187|PF02634|PIRSF015626|PTHR30592|SSF53927|TIGR00129
fdhE|fdhE|AP_003917.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR006452|IPR024064	FdhE-like|Formate dehydrogenase accessory protein	GO:0005737	G3DSA:3.90.1670.10|MF_00611|PF04216|PIRSF018296|SSF144020|TIGR01562
fdhF|fdhF|AP_004580.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR006478|IPR006655|IPR006656|IPR006657|IPR006963|IPR009010|IPR027467	Aspartate decarboxylase-like domain|Formate dehydrogenase, alpha subunit|Molybdopterin oxidoreductase|Molybdopterin oxidoreductase, 4Fe-4S domain|Molybdopterin oxidoreductase, molybdopterin cofactor binding site|Molybdopterin oxidoreductase, prokaryotic, conserved site|Molydopterin dinucleotide-binding domain	GO:0008863|GO:0009055|GO:0015942|GO:0016491|GO:0030151|GO:0051539|GO:0055114	G3DSA:1.20.5.460|G3DSA:2.20.25.90|G3DSA:2.40.40.20|G3DSA:3.40.50.740|PF00384|PF01568|PF04879|PS00490|PS00551|PS00932|PTHR11615|PTHR11615:SF38|SM00926|SSF50692|SSF53706|TIGR01591
fdnG|fdnG|AP_002097.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR006311|IPR006443|IPR006655|IPR006656|IPR006657|IPR006963|IPR009010|IPR027467	Aspartate decarboxylase-like domain|Formate dehydrogenase, alpha subunit, anaerobic|Molybdopterin oxidoreductase|Molybdopterin oxidoreductase, 4Fe-4S domain|Molybdopterin oxidoreductase, molybdopterin cofactor binding site|Molybdopterin oxidoreductase, prokaryotic, conserved site|Molydopterin dinucleotide-binding domain|Twin-arginine translocation pathway, signal sequence	GO:0005737|GO:0008863|GO:0009055|GO:0016491|GO:0030151|GO:0045333|GO:0051539|GO:0055114	G3DSA:2.20.25.90|G3DSA:2.40.40.20|G3DSA:3.40.228.10|G3DSA:3.40.50.740|PF00384|PF01568|PF04879|PS00551|PS00932|PS51318|PTHR11615|PTHR11615:SF75|SM00926|SSF50692|SSF53706|TIGR01553
fdnH|fdnH|AP_002098.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001450|IPR006470|IPR014603|IPR015246|IPR017896|IPR017900	4Fe-4S binding domain|4Fe-4S ferredoxin, iron-sulphur binding, conserved site|4Fe-4S ferredoxin-type, iron-sulpur binding domain|Formate dehydrogenase, beta subunit|Formate dehydrogenase, iron-sulphur subunit|Formate dehydrogenase, transmembrane	GO:0008863|GO:0009055|GO:0016021|GO:0045333|GO:0051536	G3DSA:1.20.5.480|G3DSA:3.30.70.20|PF00037|PF09163|PF12798|PF12838|PIRSF036298|PS00198|PS51379|PTHR11938|PTHR11938:SF10|SSF54862|TIGR01582
fdnI|fdnI|AP_002099.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR006471|IPR016174	Di-haem cytochrome, transmembrane|Formate dehydrogenase, gamma subunit	GO:0008863|GO:0009326|GO:0016020|GO:0016021|GO:0022904|GO:0045333	G3DSA:1.20.950.20|PF00033|PTHR30074|PTHR30074:SF0|SSF81342|TIGR01583
fdoG|fdoG|AP_003914.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR006311|IPR006443|IPR006655|IPR006656|IPR006657|IPR006963|IPR009010|IPR027467	Aspartate decarboxylase-like domain|Formate dehydrogenase, alpha subunit, anaerobic|Molybdopterin oxidoreductase|Molybdopterin oxidoreductase, 4Fe-4S domain|Molybdopterin oxidoreductase, molybdopterin cofactor binding site|Molybdopterin oxidoreductase, prokaryotic, conserved site|Molydopterin dinucleotide-binding domain|Twin-arginine translocation pathway, signal sequence	GO:0005737|GO:0008863|GO:0009055|GO:0016491|GO:0030151|GO:0045333|GO:0051539|GO:0055114	G3DSA:2.20.25.90|G3DSA:2.40.40.20|G3DSA:3.40.228.10|G3DSA:3.40.50.740|PF00384|PF01568|PF04879|PS00551|PS00932|PS51318|PTHR11615|PTHR11615:SF75|SM00926|SSF50692|SSF53706|TIGR01553
fdoH|fdoH|AP_003915.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001450|IPR006470|IPR014603|IPR015246|IPR017896|IPR017900	4Fe-4S binding domain|4Fe-4S ferredoxin, iron-sulphur binding, conserved site|4Fe-4S ferredoxin-type, iron-sulpur binding domain|Formate dehydrogenase, beta subunit|Formate dehydrogenase, iron-sulphur subunit|Formate dehydrogenase, transmembrane	GO:0008863|GO:0009055|GO:0016021|GO:0045333|GO:0051536	G3DSA:1.20.5.480|G3DSA:3.30.70.20|PF09163|PF12800|PF13247|PIRSF036298|PS00198|PS51379|PTHR11938|PTHR11938:SF10|SSF54862|TIGR01582
fdoI|fdoI|AP_003916.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR006471|IPR016174	Di-haem cytochrome, transmembrane|Formate dehydrogenase, gamma subunit	GO:0008863|GO:0009326|GO:0016020|GO:0016021|GO:0022904|GO:0045333	G3DSA:1.20.950.20|PF00033|PTHR30074|PTHR30074:SF0|SSF81342|TIGR01583
fdrA|fdrA|AP_001166.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003781|IPR005811|IPR016102	ATP-citrate lyase/succinyl-CoA ligase|CoA-binding|Succinyl-CoA synthetase-like	GO:0003824|GO:0008152|GO:0048037	G3DSA:3.40.50.261|PF00549|PF02629|SSF52210
fdx|fdx|AP_003111.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001041|IPR001055|IPR011536|IPR012675|IPR018298	2Fe-2S ferredoxin-type domain|Adrenodoxin|Adrenodoxin, iron-sulphur binding site|Beta-grasp domain|Ferredoxin, 2Fe-2S type	GO:0009055|GO:0051536|GO:0051537	G3DSA:3.10.20.30|PF00111|PR00355|PS00814|PS51085|PTHR23426|PTHR23426:SF8|SSF54292|TIGR02007
feaB|feaB|AP_002012.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR015590|IPR016160|IPR016161|IPR016162|IPR016163	Aldehyde dehydrogenase domain|Aldehyde dehydrogenase, C-terminal|Aldehyde dehydrogenase, N-terminal|Aldehyde dehydrogenase, conserved site|Aldehyde/histidinol dehydrogenase	GO:0008152|GO:0016491|GO:0016620|GO:0055114	G3DSA:3.40.309.10|G3DSA:3.40.605.10|PF00171|PS00070|PS00687|PTHR11699|PTHR11699:SF46|SSF53720
feaR|feaR|AP_002011.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003313|IPR009057|IPR018060|IPR020449	DNA binding HTH domain, AraC-type|Homeodomain-like|Transcription regulator HTH, AraC, arabinose-binding/dimerisation|Transcription regulator HTH, AraC- type	GO:0003677|GO:0003700|GO:0005622|GO:0006355|GO:0043565	G3DSA:1.10.10.60|PF12833|PR00032|PS01124|PTHR11019|PTHR11019:SF21|SM00342|SSF46689|SSF51215
fecA|fecA|AP_004781.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000531|IPR010105|IPR010916|IPR010917|IPR011662|IPR012910	Secretin/TonB, short N-terminal|TonB box, conserved site|TonB-dependent receptor, beta-barrel|TonB-dependent receptor, conserved site|TonB-dependent receptor, plug|TonB-dependent siderophore receptor	GO:0004872|GO:0005215|GO:0005506|GO:0006810|GO:0015343|GO:0015891|GO:0016020|GO:0019867	G3DSA:2.170.130.10|G3DSA:2.40.170.20|PF00593|PF07660|PF07715|PS00430|PS01156|PTHR30442|SM00965|SSF56935|TIGR01783
fecB|fecB|AP_004780.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002491	ABC transporter periplasmic binding domain	GO:0005488	G3DSA:3.40.50.1980|PF01497|PS50983|PTHR30532|SSF53807
fecC|fecC|AP_004779.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000522	ABC transporter, permease protein	GO:0005215|GO:0016020	G3DSA:1.10.3470.10|PF01032|PTHR30472|PTHR30472:SF3|SSF81345
fecD|fecD|AP_004778.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000522	ABC transporter, permease protein	GO:0005215|GO:0016020	G3DSA:1.10.3470.10|PF01032|PS51257|PTHR30472|PTHR30472:SF2|SSF81345
fecE|fecE|AP_004777.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003439|IPR003593|IPR017871|IPR027417	AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase	GO:0000166|GO:0005524|GO:0016887|GO:0017111	G3DSA:3.40.50.300|PF00005|PS00211|PS50893|PTHR24220|PTHR24220:SF73|SM00382|SSF52540
fecI|fecI|AP_004783.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000838|IPR007627|IPR011991|IPR013249|IPR013324|IPR013325|IPR014284	RNA polymerase sigma factor 70, ECF, conserved site|RNA polymerase sigma factor 70, region 4 type 2|RNA polymerase sigma factor, region 2|RNA polymerase sigma factor, region 3/4|RNA polymerase sigma-70 like domain|RNA polymerase sigma-70 region 2|Winged helix-turn-helix DNA-binding domain	GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987	G3DSA:1.10.10.10|G3DSA:1.10.1740.10|PF04542|PF08281|PS01063|PTHR30173|PTHR30173:SF0|SSF88659|SSF88946|TIGR02937
fecR|fecR|AP_004782.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR006860|IPR012373	Fe(2+)-dicitrate sensor, transmembrane component|FecR protein		PF04773|PIRSF018266|PTHR30273
feoA|feoA|AP_004382.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR007167|IPR008988	Ferrous iron transporter FeoA domain|Transcriptional repressor, C-terminal	GO:0046914	PF04023|SM00899|SSF50037
feoB|feoB|AP_004381.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003373|IPR011619|IPR011640|IPR011642|IPR027417	Ferrous iron transport protein B|Ferrous iron transport protein B, C-terminal|Ferrous iron transport protein B, N-terminal|Nucleoside recognition Gate|P-loop containing nucleoside triphosphate hydrolase	GO:0001882|GO:0005525|GO:0015093|GO:0015684|GO:0016021	G3DSA:3.40.50.300|PF02421|PF07664|PF07670|PTHR11649|PTHR11649:SF39|SSF52540|TIGR00437
fepA|fepA|AP_001230.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000531|IPR010105|IPR010916|IPR010917|IPR012910	TonB box, conserved site|TonB-dependent receptor, beta-barrel|TonB-dependent receptor, conserved site|TonB-dependent receptor, plug|TonB-dependent siderophore receptor	GO:0004872|GO:0005215|GO:0005506|GO:0006810|GO:0015343|GO:0015891|GO:0016020	G3DSA:2.170.130.10|G3DSA:2.40.170.20|PF00593|PF07715|PS00430|PS01156|PTHR30069|PTHR30069:SF2|SSF56935|TIGR01783
fepB|fepB|AP_001239.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002491	ABC transporter periplasmic binding domain	GO:0005488	G3DSA:3.40.50.1980|PF01497|PS50983|PTHR30532|SSF53807
fepC|fepC|AP_001235.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003439|IPR003593|IPR017871|IPR027417	AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase	GO:0000166|GO:0005524|GO:0016887|GO:0017111	G3DSA:3.40.50.300|PF00005|PS00211|PS50893|PTHR24220|PTHR24220:SF73|SM00382|SSF52540
fepD|fepD|AP_001237.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000522	ABC transporter, permease protein	GO:0005215|GO:0016020	G3DSA:1.10.3470.10|PF01032|PTHR30472|PTHR30472:SF1|SSF81345
fepE|fepE|AP_001234.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003856	Lipopolysaccharide biosynthesis	GO:0009103|GO:0016020	G3DSA:1.10.287.210|G3DSA:3.30.1890.10|PF02706|SSF160355
fepG|fepG|AP_001236.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000522	ABC transporter, permease protein	GO:0005215|GO:0016020	G3DSA:1.10.3470.10|PF01032|PS51257|PTHR30472|PTHR30472:SF0|SSF81345
fes|fes|AP_001231.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000801|IPR013783|IPR014756|IPR021764	Enterochelin esterase, N-terminal|Immunoglobulin E-set|Immunoglobulin-like fold|Putative esterase	GO:0005506|GO:0005737|GO:0006826|GO:0008849	G3DSA:2.60.40.10|G3DSA:3.40.50.1820|PF00756|PF11806|PTHR10907|PTHR10907:SF33|SSF53474|SSF81296
ffh|ffh|AP_003191.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000897|IPR003593|IPR004125|IPR004780|IPR013822|IPR022941|IPR027417	AAA+ ATPase domain|P-loop containing nucleoside triphosphate hydrolase|Signal recognition particle protein Ffh|Signal recognition particle, SRP54 subunit|Signal recognition particle, SRP54 subunit, GTPase domain|Signal recognition particle, SRP54 subunit, M-domain|Signal recognition particle, SRP54 subunit, helical bundle	GO:0000166|GO:0003924|GO:0005525|GO:0006614|GO:0008312|GO:0017111|GO:0048500	G3DSA:1.10.260.30|G3DSA:1.20.120.140|G3DSA:3.40.50.300|MF_00306|PF00448|PF02881|PF02978|PS00300|PTHR11564|PTHR11564:SF7|SM00382|SM00962|SM00963|SSF47446|SSF52540|TIGR00959
fhlA|fhlA|AP_003298.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002078|IPR002197|IPR003018|IPR003593|IPR009057|IPR025662|IPR025944|IPR027417	AAA+ ATPase domain|DNA binding HTH domain,  Fis-type|GAF domain|Homeodomain-like|P-loop containing nucleoside triphosphate hydrolase|RNA polymerase sigma factor 54 interaction domain|Sigma-54 interaction domain, ATP-binding site 1|Sigma-54 interaction domain, conserved site	GO:0000166|GO:0003677|GO:0003700|GO:0005515|GO:0005524|GO:0006355|GO:0008134|GO:0017111	G3DSA:1.10.10.60|G3DSA:1.10.8.60|G3DSA:3.30.450.40|G3DSA:3.40.50.300|PF00158|PF01590|PF02954|PR01590|PS00675|PS00688|PS50045|PTHR32071|PTHR32071:SF0|SM00065|SM00382|SSF46689|SSF52540|SSF55781
fhuA|fhuA|AP_000811.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000531|IPR010105|IPR010916|IPR010917|IPR012910	TonB box, conserved site|TonB-dependent receptor, beta-barrel|TonB-dependent receptor, conserved site|TonB-dependent receptor, plug|TonB-dependent siderophore receptor	GO:0004872|GO:0005215|GO:0005506|GO:0006810|GO:0015343|GO:0015891|GO:0016020	G3DSA:2.170.130.10|G3DSA:2.40.170.20|PF00593|PF07715|PS00430|PS01156|PTHR32552|PTHR32552:SF0|SSF56935|TIGR01783
fhuB|fhuB|AP_000814.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000522	ABC transporter, permease protein	GO:0005215|GO:0016020	G3DSA:1.10.3470.10|PF01032|PTHR30472|PTHR30472:SF0|SSF81345
fhuC|fhuC|AP_000812.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003439|IPR003593|IPR017871|IPR027417	AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase	GO:0000166|GO:0005524|GO:0016887|GO:0017111	G3DSA:3.40.50.300|PF00005|PS00211|PS50893|PTHR24220|PTHR24220:SF73|SM00382|SSF52540
fhuD|fhuD|AP_000813.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002491|IPR008091	ABC transporter periplasmic binding domain|Ferrichrome-binding periplasmic protein	GO:0005488	G3DSA:3.40.50.1980|PF01497|PR01715|PS50983|SSF53807
fhuE|fhuE|AP_001728.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000531|IPR010105|IPR010916|IPR010917|IPR012910	TonB box, conserved site|TonB-dependent receptor, beta-barrel|TonB-dependent receptor, conserved site|TonB-dependent receptor, plug|TonB-dependent siderophore receptor	GO:0004872|GO:0005215|GO:0005506|GO:0006810|GO:0015343|GO:0015891|GO:0016020	G3DSA:2.170.130.10|G3DSA:2.40.170.20|PF00593|PF07715|PS00430|PS01156|PTHR32552|PTHR32552:SF0|SSF56935|TIGR01783
fhuF|fhuF|AP_004856.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR008090|IPR022770|IPR024726	Ferric iron reductase|Ferric iron reductase, C-terminal|FhuF/siderophore biosynthesis protein, C-terminal	GO:0051537	PF06276|PF11575|PR01714|TIGR03951
fic|fic|AP_004428.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003812	Fido domain		G3DSA:1.10.3290.10|PF02661|PS51459|SSF140931
fieF|fieF|AP_003894.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002524|IPR023783|IPR027469|IPR027470	Cation efflux protein|Cation efflux protein cytoplasmic domain|Cation efflux protein transmembrane domain|Cation efflux pump FieF	GO:0006812|GO:0006829|GO:0008324|GO:0015684|GO:0016021|GO:0046873|GO:0055085	G3DSA:1.20.1510.10|G3DSA:3.30.70.1350|MF_01425|PF01545|PTHR11562|SSF160240|SSF161111|TIGR01297
fimA|fimA|AP_004806.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000259|IPR008966	Adhesion domain|Fimbrial-type adhesion domain	GO:0007155|GO:0009289	G3DSA:2.60.40.1090|PF00419|SSF49401
fimB|fimB|AP_004804.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002104|IPR011010|IPR013762	DNA breaking-rejoining enzyme, catalytic core|Integrase, catalytic|Integrase-like, catalytic core	GO:0003677|GO:0006310|GO:0015074	G3DSA:1.10.443.10|PF00589|PTHR30451|SSF56349
fimC|fimC|AP_004808.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001829|IPR008962|IPR016147|IPR016148|IPR018046	PapD-like|Pili assembly chaperone, C-terminal domain|Pili assembly chaperone, N-terminal, bacterial|Pili assembly chaperone, bacterial|Pili assembly chaperone, conserved site	GO:0030288|GO:0043711|GO:0071555	G3DSA:2.60.40.1070|G3DSA:2.60.40.360|PF00345|PF02753|PR00969|PS00635|PTHR30251|SSF49354|SSF49584
fimD|fimD|AP_004809.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000015|IPR018030|IPR025885|IPR025949	Fimbrial biogenesis outer membrane usher protein|Fimbrial membrane usher, conserved site|PapC N-terminal domain|PapC-like C-terminal domain	GO:0005215|GO:0005515|GO:0006810|GO:0016020	PF00577|PF13953|PF13954|PS01151|PTHR30451|PTHR30451:SF0|SSF141729
fimE|fimE|AP_004805.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002104|IPR011010|IPR013762	DNA breaking-rejoining enzyme, catalytic core|Integrase, catalytic|Integrase-like, catalytic core	GO:0003677|GO:0006310|GO:0015074	G3DSA:1.10.443.10|PF00589|PTHR30451|SSF56349
fimF|fimF|AP_004810.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000259|IPR008966	Adhesion domain|Fimbrial-type adhesion domain	GO:0007155|GO:0009289	G3DSA:2.60.40.1090|PF00419|SSF49401
fimG|fimG|AP_004811.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000259|IPR008966	Adhesion domain|Fimbrial-type adhesion domain	GO:0007155|GO:0009289	G3DSA:2.60.40.1090|PF00419|SSF49401
fimH|fimH|AP_004812.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000259|IPR008966|IPR015243	Adhesion domain|FimH, mannose-binding|Fimbrial-type adhesion domain	GO:0007155|GO:0009289	G3DSA:2.60.40.1090|PF00419|PF09160|PS51257|SSF49401
fimI|fimI|AP_004807.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000259|IPR008966	Adhesion domain|Fimbrial-type adhesion domain	GO:0007155|GO:0009289	G3DSA:2.60.40.1090|PF00419|SSF49401
fimZ|fimZ|AP_001182.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000792|IPR001789|IPR011006|IPR011991|IPR016032	CheY-like superfamily|Signal transduction response regulator, C-terminal effector|Signal transduction response regulator, receiver domain|Transcription regulator LuxR, C-terminal|Winged helix-turn-helix DNA-binding domain	GO:0000156|GO:0000160|GO:0003677|GO:0003700|GO:0005622|GO:0006355|GO:0043565	G3DSA:1.10.10.10|G3DSA:3.40.50.2300|PF00072|PF00196|PR00038|PS00622|PS50043|PS50110|PTHR26402|PTHR26402:SF107|SM00421|SM00448|SSF46894|SSF52172
fis|fis|AP_003801.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002197|IPR005412|IPR009057	DNA binding HTH domain,  Fis-type|DNA-binding protein Fis|Homeodomain-like	GO:0003677|GO:0003700|GO:0006355	G3DSA:1.10.10.60|MF_00166|PF02954|PIRSF002097|PR01590|PR01591|SSF46689
fiu|fiu|AP_001436.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000531|IPR010105|IPR010916|IPR012910	TonB box, conserved site|TonB-dependent receptor, beta-barrel|TonB-dependent receptor, plug|TonB-dependent siderophore receptor	GO:0004872|GO:0005215|GO:0005506|GO:0006810|GO:0015343|GO:0015891|GO:0016020	G3DSA:2.170.130.10|G3DSA:2.40.170.20|PF00593|PF07715|PS00430|PTHR32552|PTHR32552:SF0|SSF56935|TIGR01783
fixA|fixA|AP_000705.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000049|IPR012255|IPR014729|IPR014730|IPR023463	Electron transfer flavoprotein, FixA subunit, predicted|Electron transfer flavoprotein, alpha/beta-subunit, N-terminal|Electron transfer flavoprotein, beta subunit|Electron transfer flavoprotein, beta-subunit, conserved site|Rossmann-like alpha/beta/alpha sandwich fold	GO:0009055|GO:0009437	G3DSA:3.40.50.620|MF_01055|PF01012|PIRSF000090|PS01065|PTHR21294|PTHR21294:SF0|SM00893|SSF52402
fixB|fixB|AP_000706.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001308|IPR014729|IPR014730|IPR014731|IPR018206|IPR023461	Electron transfer flavoprotein, FixB subunit|Electron transfer flavoprotein, alpha subunit|Electron transfer flavoprotein, alpha subunit, C-terminal|Electron transfer flavoprotein, alpha subunit, C-terminal, conserved site|Electron transfer flavoprotein, alpha/beta-subunit, N-terminal|Rossmann-like alpha/beta/alpha sandwich fold	GO:0009055|GO:0009437|GO:0050660	G3DSA:3.40.50.1220|G3DSA:3.40.50.620|MF_01056|PF00766|PF01012|PIRSF000089|PS00696|PTHR10909|PTHR10909:SF170|SM00893|SSF52402|SSF52467
fixC|fixC|AP_000707.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003042|IPR006076	Aromatic-ring hydroxylase-like|FAD dependent oxidoreductase	GO:0008152|GO:0016491|GO:0055114	G3DSA:3.50.50.60|PF01266|PF13450|PR00420|PTHR10617|PTHR10617:SF6|SSF51905|SSF54373
fixX|fixX|AP_000708.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR012206	Ferredoxin-like, FixX	GO:0005506	G3DSA:3.30.70.20|PIRSF036548|SSF54862
fklB|fklB|AP_004707.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000774|IPR001179|IPR023566	Peptidyl-prolyl cis-trans isomerase, FKBP-type|Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal|Peptidyl-prolyl cis-trans isomerase, FKBP-type, domain	GO:0006457	G3DSA:1.10.287.460|G3DSA:3.10.50.40|PF00254|PF01346|PS50059|PTHR10516|PTHR10516:SF190|SSF54534
fkpA|fkpA|AP_004443.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000774|IPR001179|IPR023566	Peptidyl-prolyl cis-trans isomerase, FKBP-type|Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal|Peptidyl-prolyl cis-trans isomerase, FKBP-type, domain	GO:0006457	G3DSA:1.10.287.460|G3DSA:3.10.50.40|PF00254|PF01346|PS50059|PTHR10516|PTHR10516:SF17|SSF54534
fkpB|fkpB|AP_000692.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001179|IPR023566	Peptidyl-prolyl cis-trans isomerase, FKBP-type|Peptidyl-prolyl cis-trans isomerase, FKBP-type, domain	GO:0006457	G3DSA:3.10.50.40|PF00254|PS50059|PTHR10516|PTHR10516:SF108|SSF54534
fldA|fldA|AP_001322.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR008254|IPR010086	Flavodoxin, long chain|Flavodoxin/nitric oxide synthase	GO:0010181|GO:0016491	G3DSA:3.40.50.360|PF00258|PIRSF038996|PTHR30112|SSF52218|TIGR01752
fldB|fldB|AP_003454.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001226|IPR008254|IPR010086	Flavodoxin, conserved site|Flavodoxin, long chain|Flavodoxin/nitric oxide synthase	GO:0009055|GO:0010181|GO:0016491	G3DSA:3.40.50.360|PF00258|PIRSF038996|PS00201|PS50902|PTHR30112|SSF52218|TIGR01752
flgA|flgA|AP_001698.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR013974|IPR017585	Flagella basal body P-ring formation protein FlgA, C-terminal|SAF domain		PF13144|SM00858|TIGR03170
flgB|flgB|AP_001699.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001444|IPR006300|IPR019776	Flagellar basal body rod protein, N-terminal|Flagellar basal body rod protein, conserved site|Flagellar basal-body rod protein FlgB	GO:0001539|GO:0003774|GO:0005198|GO:0009288|GO:0009425	PF00460|PIRSF002889|PS00588|TIGR01396
flgC|flgC|AP_001700.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001444|IPR006299|IPR010930|IPR019776	Flagellar basal body rod protein, N-terminal|Flagellar basal body rod protein, conserved site|Flagellar basal-body rod protein FlgC|Flagellar basal-body/hook protein, C-terminal domain	GO:0001539|GO:0003774|GO:0005198|GO:0009288|GO:0030694	PF00460|PF06429|PS00588|TIGR01395
flgD|flgD|AP_001701.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR005648|IPR025963|IPR025965	Flagellar hook capping protein|FlgD Ig-like domain|FlgD Tudor-like domain		PF03963|PF13860|PF13861|PTHR30435|PTHR30435:SF0
flgE|flgE|AP_001702.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001444|IPR010930|IPR011491|IPR019776|IPR020013	Fagellar hook-basal body protein, FlgE/F/G|Flagellar basal body FlaE|Flagellar basal body rod protein, N-terminal|Flagellar basal body rod protein, conserved site|Flagellar basal-body/hook protein, C-terminal domain	GO:0001539|GO:0003774|GO:0005198|GO:0009288|GO:0030694	PF00460|PF06429|PF07559|PS00588|PTHR30435|PTHR30435:SF1|SSF117143|TIGR03506
flgF|flgF|AP_001703.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001444|IPR010930|IPR019776|IPR020013	Fagellar hook-basal body protein, FlgE/F/G|Flagellar basal body rod protein, N-terminal|Flagellar basal body rod protein, conserved site|Flagellar basal-body/hook protein, C-terminal domain	GO:0001539|GO:0003774|GO:0005198|GO:0009288	PF00460|PF06429|PS00588|PTHR30435|SSF117143|TIGR03506
flgG|flgG|AP_001704.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001444|IPR010930|IPR012834|IPR019776|IPR020013	Fagellar hook-basal body protein, FlgE/F/G|Flagellar basal body rod protein, N-terminal|Flagellar basal body rod protein, conserved site|Flagellar basal-body rod FlgG|Flagellar basal-body/hook protein, C-terminal domain	GO:0001539|GO:0003774|GO:0005198|GO:0006928|GO:0009288|GO:0009426|GO:0043064	PF00460|PF06429|PS00588|PTHR30435|PTHR30435:SF0|SSF117143|TIGR02488|TIGR03506
flgH|flgH|AP_001705.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000527	Flagellar L-ring protein	GO:0001539|GO:0003774|GO:0009427	MF_00415|PF02107|PR01008|PS51257
flgI|flgI|AP_001706.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001782	Flagellar P-ring protein	GO:0001539|GO:0005198|GO:0009428|GO:0030288	MF_00416|PF02119|PR01010|PTHR30381|PTHR30381:SF0
flgJ|flgJ|AP_001707.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000423|IPR002901|IPR013338|IPR013377|IPR019301	Flagellar protein FlgJ type-1|Flagellar protein FlgJ type-2|Flagellar protein FlgJ, N-terminal|Lysozyme domain, subfamily 2|Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase	GO:0001539|GO:0004040|GO:0009253|GO:0009288|GO:0009296|GO:0016787|GO:0016798|GO:0044036	PF01832|PF10135|PR01002|SM00047|TIGR02541
flgK|flgK|AP_001708.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001444|IPR002371|IPR010930	Flagellar basal body rod protein, N-terminal|Flagellar basal-body/hook protein, C-terminal domain|Flagellar hook-associated protein, FlgK	GO:0001539|GO:0003774|GO:0005198|GO:0009288|GO:0009296|GO:0009424	PF00460|PF06429|PR01005|PTHR30033|PTHR30033:SF0|SSF64518|TIGR02492
flgL|flgL|AP_001709.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001029|IPR013384	Flagellar hook-associated protein 3|Flagellin, D0/D1 domain	GO:0001539|GO:0005198|GO:0009288|GO:0009424	G3DSA:1.20.1330.10|PF00669|SSF64518|TIGR02550
flgM|flgM|AP_001697.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR007412	Anti-sigma-28 factor, FlgM	GO:0045892	PF04316|SSF101498|TIGR03824
flgN|flgN|AP_001696.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR007809	FlgN-like domain	GO:0009296	G3DSA:1.20.58.300|PF05130|SSF140566
flhA|flhA|AP_002499.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001712|IPR006301|IPR025505	FHIPEP conserved site|Flagellar biosynthesis protein FlhA|Type III secretion system FHIPEP	GO:0009296|GO:0009306|GO:0016020|GO:0016021	PF00771|PIRSF005419|PR00949|PS00994|PTHR30161|PTHR30161:SF0|TIGR01398
flhB|flhB|AP_002500.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR006135|IPR006136	Type III secretion system substrate exporter|Type III secretion system, flagellar biosynthetic protein, FlhB	GO:0009306|GO:0016020	G3DSA:3.40.1690.10|PF01312|PR00950|PTHR30531|PTHR30531:SF0|SSF160544|TIGR00328
flhC|flhC|AP_002511.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR007944	Flagellar transcriptional activator FlhC	GO:0003677|GO:0030092|GO:0045893	MF_01891|PD016592|PF05280|PIRSF003159|SSF160930
flhD|flhD|AP_002512.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR007911|IPR023559	Flagellar transcriptional activator FlhD|Flagellar transcriptional activator FlhD, domain	GO:0003677|GO:0009296|GO:0045893	MF_00725|PD015582|PF05247|SSF63592
flhE|flhE|AP_002498.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR009420	Flagellar FlhE		PF06366
fliA|fliA|AP_002537.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000943|IPR007624|IPR007627|IPR007630|IPR011991|IPR012845|IPR013324|IPR013325|IPR014284	RNA polymerase sigma factor, FliA/WhiG|RNA polymerase sigma factor, region 2|RNA polymerase sigma factor, region 3/4|RNA polymerase sigma-70|RNA polymerase sigma-70 like domain|RNA polymerase sigma-70 region 2|RNA polymerase sigma-70 region 3|RNA polymerase sigma-70 region 4|Winged helix-turn-helix DNA-binding domain	GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987	G3DSA:1.10.10.10|G3DSA:1.10.601.10|PF04539|PF04542|PF04545|PR00046|PS00715|PS00716|PTHR30385|PTHR30385:SF0|SSF88659|SSF88946|TIGR02479|TIGR02937
fliC|fliC|AP_002538.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001029|IPR001492|IPR014981	Flagellin|Flagellin D3|Flagellin, D0/D1 domain	GO:0001539|GO:0005198|GO:0009288|GO:0009420	G3DSA:1.20.1330.10|G3DSA:2.170.280.10|PF00669|PF00700|PF08884|PR00207|PTHR30244|PTHR30244:SF1|SSF64518
fliD|fliD|AP_002539.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003481|IPR010809	Flagellar hook-associated 2, C-terminal|Flagellar hook-associated protein 2, N-terminal	GO:0007155|GO:0009288|GO:0009296	PF02465|PF07195|PTHR30288|PTHR30288:SF0
fliE|fliE|AP_002549.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001624	Flagellar hook-basal body complex protein FliE	GO:0001539|GO:0003774|GO:0005198|GO:0009288	PF02049|PR01006|TIGR00205
fliF|fliF|AP_002550.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000067|IPR006182|IPR013556	Flagellar M-ring C-terminal|Flagellar M-ring protein FliF|Secretory protein YscJ/FliF	GO:0001539|GO:0003774|GO:0009431	PF01514|PF08345|PIRSF004862|PR01009|PTHR30046|PTHR30046:SF0|TIGR00206
fliG|fliG|AP_002551.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000090|IPR011002	Flagellar motor switch protein FliG|Flagellar motor switch protein FliG, alpha-helical	GO:0001539|GO:0003774|GO:0006935|GO:0009288	G3DSA:1.10.220.30|PF01706|PIRSF003161|PR00954|PTHR30534|PTHR30534:SF0|SSF48029|TIGR00207
fliH|fliH|AP_002552.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000563|IPR018035	Flagellar assembly protein FliH|Flagellar assembly protein FliH/Type III secretion system HrpE	GO:0001539|GO:0003774|GO:0009288	PF02108|PR01003
fliI|fliI|AP_002553.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000194|IPR003593|IPR005714|IPR020003|IPR020005|IPR027417	AAA+ ATPase domain|ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain|ATPase, alpha/beta subunit, nucleotide-binding domain, active site|ATPase, type III secretion system, FliI/YscN|Flagellar export ATPase, FliI, clade 1|P-loop containing nucleoside triphosphate hydrolase	GO:0000166|GO:0005524|GO:0005737|GO:0006200|GO:0009058|GO:0009296|GO:0015986|GO:0016820|GO:0016887|GO:0017111|GO:0030254|GO:0030257|GO:0033178	G3DSA:3.40.50.300|PF00006|PS00152|PTHR15184|PTHR15184:SF9|SM00382|SSF52540|TIGR01026|TIGR03496
fliJ|fliJ|AP_002554.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR012823|IPR018006	Flagellar FliJ, proteobacteria|Flagellar export FliJ	GO:0001539|GO:0003774|GO:0006935|GO:0009288|GO:0016020	PF02050|PIRSF019404|PR01004|TIGR02473
fliK|fliK|AP_002555.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001635|IPR021136	Flagellar hook-length control protein|Flagellar hook-length control protein-like, C-terminal	GO:0003774|GO:0009296|GO:0009424	PF02120|PR01007
fliL|fliL|AP_002556.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR005503	Flagellar basal body-associated protein FliL	GO:0001539|GO:0006935|GO:0009425	PF03748
fliM|fliM|AP_002557.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001543|IPR001689	Flagellar motor switch protein FliM|Surface presentation of antigen (SpoA)	GO:0001539|GO:0003774|GO:0006935|GO:0009425	G3DSA:2.30.330.10|PF01052|PF02154|PIRSF002888|PR00955|PTHR30034|PTHR30034:SF0|SSF101801|SSF103039|TIGR01397
fliN|fliN|AP_002558.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001172|IPR001543|IPR012826	Flagellar motor switch FliN|Flagellar motor switch FliN/Type III secretion HrcQb|Surface presentation of antigen (SpoA)	GO:0001539|GO:0003774|GO:0006935|GO:0009288|GO:0009425|GO:0016020	G3DSA:2.30.330.10|PF01052|PR00956|PTHR22617|PTHR22617:SF4|SSF101801|TIGR02480
fliO|fliO|AP_002559.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR022781	Flagellar biosynthesis protein, FliO	GO:0016021|GO:0043064	PF04347|TIGR03500
fliP|fliP|AP_002560.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR005837|IPR005838	Flagellar transport protein FliP|Type III secretion system inner membrane P protein	GO:0009306|GO:0016020	PF00813|PR00951|PR01302|PS01060|PS01061|PTHR30587|PTHR30587:SF0|TIGR01103
fliQ|fliQ|AP_002561.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002191|IPR006305	Bacterial export protein FliQ, family 3|Flagellar biosynthesis protein FliQ	GO:0009296|GO:0009306|GO:0016020|GO:0016021	PF01313|PIRSF004669|PR00952|TIGR01402
fliR|fliR|AP_002562.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002010|IPR006303	Flagellar biosynthesis protein FliR|Type III secretion system inner membrane R protein	GO:0006605|GO:0009296|GO:0016020|GO:0016021	PF01311|PR00953|PTHR30065|PTHR30065:SF0|TIGR01400
fliS|fliS|AP_002540.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003713	Flagellar protein FliS	GO:0009288|GO:0009296	G3DSA:1.20.120.340|PF02561|SSF101116|TIGR00208
fliT|fliT|AP_002541.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR008622	Flagellar protein FliT		G3DSA:1.20.58.380|MF_01180|PF05400
fliY|fliY|AP_002535.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001638|IPR018313	Extracellular solute-binding protein, family 3|Extracellular solute-binding protein, family 3, conserved site	GO:0005215|GO:0006810|GO:0030288	G3DSA:3.40.190.10|PF00497|PS01039|PTHR18966|SM00062|SSF53850
fliZ|fliZ|AP_002536.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004107|IPR022523	Flagellar regulator, FliZ|Integrase, SAM-like, N-terminal	GO:0003677|GO:0015074	PF02899|TIGR03823
flk|flk|AP_002921.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR023597	Flagellar regulator Flk	GO:0010468|GO:0031224	PIRSF020588
flu|flu|AP_002599.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR005546|IPR011050|IPR012332|IPR024973	Autotransporter beta-domain|Extended signal peptide region|P22 tailspike C-terminal domain-like|Pectin lyase fold/virulence factor		G3DSA:2.160.20.20|G3DSA:2.40.128.130|PF03797|PF13018|PS51208|SM00869|SSF103515|SSF51126
flxA|flxA|AP_002188.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR025577	FlxA-like protein		PF14282
fmt|fmt|AP_004503.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001555|IPR002376|IPR005793|IPR005794|IPR011034|IPR015518	Formyl transferase, C-terminal|Formyl transferase, C-terminal-like|Formyl transferase, N-terminal|Methionine tRNA Formyltransferase-like|Methionyl-tRNA formyltransferase|Phosphoribosylglycinamide formyltransferase, active site	GO:0003824|GO:0004479|GO:0008168|GO:0009058|GO:0016742|GO:0071951	G3DSA:3.10.25.10|G3DSA:3.40.50.170|MF_00182|PF00551|PF02911|PS00373|PTHR11138|SSF50486|SSF53328|TIGR00460
fnr|fnr|AP_001962.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000595|IPR001808|IPR011991|IPR012318|IPR014710|IPR018335|IPR018490	Cyclic nucleotide-binding domain|Cyclic nucleotide-binding-like|Helix-turn-helix motif, Crp-type|RmlC-like jelly roll fold|Transcription regulator HTH, Crp|Transcription regulator HTH, Crp-type, conserved site|Winged helix-turn-helix DNA-binding domain	GO:0003677|GO:0003700|GO:0005622|GO:0006355	G3DSA:1.10.10.10|G3DSA:2.60.120.10|PF00027|PF00325|PR00034|PS00042|PS50042|PS51063|PTHR24567|PTHR24567:SF13|SM00100|SM00419|SSF46785|SSF51206
focA|focA|AP_001534.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000292|IPR023271|IPR023999|IPR024002	Aquaporin-like|Formate transporter FocA, putative|Formate/nitrite transporter|Formate/nitrite transporter, conserved site	GO:0005215|GO:0006810|GO:0015499|GO:0015724|GO:0016020|GO:0016021	G3DSA:1.20.1080.10|PF01226|PS01005|PS01006|PTHR30520|PTHR30520:SF0|TIGR00790|TIGR04060
focB|focB|AP_003078.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000292|IPR023271|IPR024002	Aquaporin-like|Formate/nitrite transporter|Formate/nitrite transporter, conserved site	GO:0005215|GO:0006810|GO:0016020	G3DSA:1.20.1080.10|PF01226|PS01005|PS01006|PTHR30520|PTHR30520:SF0|TIGR00790
folA|folA|AP_000712.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001796|IPR012259|IPR017925|IPR024072	Dihydrofolate reductase|Dihydrofolate reductase conserved site|Dihydrofolate reductase domain|Dihydrofolate reductase-like domain	GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114	G3DSA:3.40.430.10|PF00186|PIRSF000194|PR00070|PS00075|PS51330|PTHR11549|SSF53597
folB|folB|AP_003608.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR006156|IPR006157	Dihydroneopterin aldolase|Dihydroneopterin aldolase/epimerase domain	GO:0004150|GO:0006760	G3DSA:3.30.1130.10|PF02152|PTHR20941|SM00905|SSF55620|TIGR00525|TIGR00526
folC|folC|AP_002915.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001645|IPR004101|IPR013221|IPR018109	Folylpolyglutamate synthetase|Folylpolyglutamate synthetase, conserved site|Mur ligase, C-terminal|Mur ligase, central	GO:0004326|GO:0005524|GO:0009058|GO:0009396|GO:0016874	G3DSA:3.40.1190.10|G3DSA:3.90.190.20|PF02875|PF08245|PIRSF001563|PS01011|PS01012|PTHR11136|PTHR11136:SF0|SSF53244|SSF53623|TIGR01499
folD|folD|AP_001176.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000672|IPR016040|IPR020630|IPR020631|IPR020867	NAD(P)-binding domain|Tetrahydrofolate dehydrogenase/cyclohydrolase|Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain|Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain|Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site	GO:0003824|GO:0004488|GO:0009396|GO:0055114	G3DSA:3.40.192.10|G3DSA:3.40.50.720|MF_01576|PF00763|PF02882|PR00085|PS00766|PS00767|PTHR10025|SSF51735|SSF53223
folE|folE|AP_002750.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001474|IPR018234|IPR020602	GTP cyclohydrolase I|GTP cyclohydrolase I, conserved site|GTP cyclohydrolase I/Nitrile oxidoreductase	GO:0003934|GO:0005737|GO:0046654	G3DSA:1.10.286.10|G3DSA:3.30.1130.10|MF_00223|PF01227|PS00859|PS00860|PTHR11109|SSF55620|TIGR00063
folK|folK|AP_000803.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000550	7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK	GO:0003848|GO:0009396	G3DSA:3.30.70.560|PF01288|PS00794|PTHR25996|PTHR25996:SF0|SSF55083|TIGR01498
folM|folM|AP_002227.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002198|IPR002347|IPR016040|IPR020904	Glucose/ribitol dehydrogenase|NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR|Short-chain dehydrogenase/reductase, conserved site	GO:0008152|GO:0016491	G3DSA:3.40.50.720|PF00106|PR00081|PS00061|PTHR24322|SSF51735
folP|folP|AP_003720.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000489|IPR006390|IPR011005	Dihydropteroate synthase|Dihydropteroate synthase-like|Pterin-binding	GO:0004156|GO:0009396|GO:0042558|GO:0044237	G3DSA:3.20.20.20|PF00809|PS00792|PS00793|PS50972|PTHR20941|PTHR20941:SF1|SSF51717|TIGR01496
folX|folX|AP_002903.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR006157	Dihydroneopterin aldolase/epimerase domain	GO:0004150|GO:0006760	G3DSA:3.30.1130.10|PF02152|PTHR20941|SM00905|SSF55620|TIGR00526
fpr|fpr|AP_003885.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001433|IPR008333|IPR017927|IPR017938	Ferredoxin reductase-type FAD-binding domain|Oxidoreductase FAD/NAD(P)-binding|Oxidoreductase, FAD-binding domain|Riboflavin synthase-like beta-barrel	GO:0016491|GO:0055114	G3DSA:2.40.30.10|G3DSA:3.40.50.80|PF00175|PF00970|PS51384|PTHR19370|PTHR19370:SF33|SSF52343|SSF63380
frc|frc|AP_002974.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003673|IPR017659|IPR023606	CoA-transferase family III|CoA-transferase family III domain|Formyl-CoA transferase	GO:0003824|GO:0008152|GO:0033608	G3DSA:3.30.1540.10|G3DSA:3.40.50.10540|MF_00742|PF02515|PTHR11837|SSF89796|TIGR03253
frdA|frdA|AP_004657.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003953|IPR005884|IPR013027|IPR014006|IPR015939|IPR027477	FAD binding domain|FAD-dependent pyridine nucleotide-disulphide oxidoreductase|Fumarate reductase, flavoprotein subunit|Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal|Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain|Succinate dehydrogenase/fumarate reductase, flavoprotein subunit	GO:0009061|GO:0016491|GO:0016627|GO:0022900|GO:0050660|GO:0055114	G3DSA:1.20.58.100|G3DSA:3.50.50.60|G3DSA:3.90.700.10|G3DSA:4.10.80.40|PF00890|PF02910|PR00368|PR00411|PTHR11632|PTHR11632:SF5|SSF46977|SSF51905|SSF56425|TIGR01176|TIGR01812
frdB|frdB|AP_004656.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001041|IPR004489|IPR009051|IPR012285|IPR012675|IPR017896|IPR025192	2Fe-2S ferredoxin-type domain|4Fe-4S ferredoxin-type, iron-sulpur binding domain|Alpha-helical ferredoxin|Beta-grasp domain|Fumarate reductase, C-terminal|Succinate dehydogenase/fumarate reductase N-terminal|Succinate dehydrogenase/fumarate reductase iron-sulphur protein	GO:0006099|GO:0009055|GO:0016491|GO:0051536|GO:0055114	G3DSA:1.10.1060.10|G3DSA:3.10.20.30|PF13085|PF13183|PTHR11921|SSF46548|SSF54292|TIGR00384
frdC|frdC|AP_004655.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003510	Fumarate reductase, subunit C	GO:0016020	G3DSA:1.20.1300.10|MF_00708|PD015900|PF02300|PIRSF000180|SSF81343
frdD|frdD|AP_004654.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003418	Fumarate reductase, D subunit	GO:0006106|GO:0016020	G3DSA:1.20.1300.10|MF_00709|PD015693|PF02313|PIRSF000179|SSF81343
fre|fre|AP_003958.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001221|IPR001433|IPR008333|IPR017927|IPR017938	Ferredoxin reductase-type FAD-binding domain|Oxidoreductase FAD/NAD(P)-binding|Oxidoreductase, FAD-binding domain|Phenol hydroxylase reductase|Riboflavin synthase-like beta-barrel	GO:0016491|GO:0055114	G3DSA:2.40.30.10|G3DSA:3.40.50.80|PF00175|PF00970|PR00410|PS51384|PTHR19370|PTHR19370:SF35|SSF52343|SSF63380
frlA|frlA|AP_004419.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002293	Amino acid/polyamine transporter I	GO:0003333|GO:0015171|GO:0016020	PF13520|PIRSF006060|PTHR11785|PTHR11785:SF134
frlB|frlB|AP_004418.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001347	Sugar isomerase (SIS)	GO:0005975|GO:0030246	G3DSA:3.40.50.10490|PF01380|PS51464|PTHR10937|SSF53697
frlC|frlC|AP_004417.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR013022	Xylose isomerase-like, TIM barrel domain		G3DSA:3.20.20.150|PF01261|PTHR12110|SSF51658
frlD|frlD|AP_004416.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002173|IPR011611	Carbohydrate kinase PfkB|Carbohydrate/puine kinase, PfkB, conserved site	GO:0016773	G3DSA:3.40.1190.20|PF00294|PS00583|PS00584|PTHR10584|PTHR10584:SF106|SSF53613
frlR|frlR|AP_004415.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000524|IPR011663|IPR011991	Transcription regulator HTH, GntR|UbiC transcription regulator-associated|Winged helix-turn-helix DNA-binding domain	GO:0003677|GO:0003700|GO:0005622|GO:0006355	G3DSA:1.10.10.10|G3DSA:3.40.1410.10|PF00392|PF07702|PR00035|PS50949|PTHR11751|PTHR11751:SF20|SM00345|SM00866|SSF46785|SSF64288
frmA|frmA|AP_001008.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002085|IPR002328|IPR011032|IPR013149|IPR013154|IPR014183|IPR016040	Alcohol dehydrogenase GroES-like|Alcohol dehydrogenase class III/S-(hydroxymethyl)glutathione dehydrogenase|Alcohol dehydrogenase superfamily, zinc-type|Alcohol dehydrogenase, C-terminal|Alcohol dehydrogenase, zinc-type, conserved site|GroES-like|NAD(P)-binding domain	GO:0006069|GO:0008270|GO:0016491|GO:0051903|GO:0055114	G3DSA:3.40.50.720|G3DSA:3.90.180.10|PF00107|PF08240|PS00059|PTHR11695|PTHR11695:SF4|SSF50129|SSF51735|TIGR02818
frmB|frmB|AP_001007.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000801|IPR014186	Putative esterase|S-formylglutathione hydrolase	GO:0004091|GO:0018738|GO:0046294	G3DSA:3.40.50.1820|PF00756|PTHR10061|SSF53474|TIGR02821
frmR|frmR|AP_001009.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003735	Metal-sensitive transcriptional repressor		PF02583
frr|frr|AP_000832.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002661|IPR023584	Ribosome recycling factor|Ribosome recycling factor domain	GO:0006412	G3DSA:1.10.132.20|PF01765|PTHR20982|SSF55194|TIGR00496
frsA|frsA|AP_000892.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR010520	Protein of unknown function DUF1100, hydrolase-like		G3DSA:3.40.50.1820|MF_01063|PF06500|SSF53474
fruA|fruA|AP_002764.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003352|IPR003353|IPR003501|IPR006327|IPR013011|IPR013014	Phosphotransferase system, EIIB component, type 2|Phosphotransferase system, EIIB component, type 2/3|Phosphotransferase system, EIIC|Phosphotransferase system, EIIC component, type 2|Phosphotransferase system, fructose IIC component|Phosphotransferase system, fructose-specific IIB subunit	GO:0005351|GO:0008982|GO:0009401|GO:0016020|GO:0016021	G3DSA:3.40.50.2300|PF02302|PF02378|PS51099|PS51104|PTHR30505|PTHR30505:SF0|SSF52794|TIGR00829|TIGR01427
fruB|fruB|AP_002766.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000032|IPR001020|IPR002114|IPR002178|IPR005698|IPR016152	Phosphotransferase system, HPr histidine phosphorylation site|Phosphotransferase system, HPr serine phosphorylation site|Phosphotransferase system, phosphocarrier HPr protein|Phosphotransferase system, phosphocarrier HPr protein-like|Phosphotransferase system, phosphoenolpyruvate-dependent sugar EIIA 2|Phosphotransferase/anion transporter	GO:0005215|GO:0005351|GO:0006810|GO:0009401	G3DSA:3.30.1340.10|G3DSA:3.40.930.10|PF00359|PF00381|PR00107|PS00369|PS00372|PS00589|PS51094|PS51350|PTHR30181|PTHR30181:SF0|SSF55594|SSF55804|TIGR01003
fruK|fruK|AP_002765.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002173|IPR011611|IPR017583|IPR022463	Carbohydrate kinase PfkB|Carbohydrate/puine kinase, PfkB, conserved site|Fructose 1-phosphate kinase|Tagatose/fructose phosphokinase	GO:0005975|GO:0008662|GO:0016773	G3DSA:3.40.1190.20|PF00294|PIRSF000535|PS00583|PS00584|PTHR10584|PTHR10584:SF37|SSF53613|TIGR03168|TIGR03828
fruR|fruR|AP_000743.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000843|IPR010982|IPR012781	D-fructose-responsive transcription factor|Lambda repressor-like, DNA-binding domain|Transcription regulator HTH, LacI	GO:0003677|GO:0003700|GO:0005622|GO:0006355|GO:0009750	G3DSA:1.10.260.40|G3DSA:3.40.50.2300|PF00356|PF13377|PS00356|PS50932|PTHR30146|SM00354|SSF47413|SSF53822|TIGR02417
frvA|frvA|AP_003908.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002178|IPR004715|IPR016152	Phosphotransferase system, IIA component fructose subfamily|Phosphotransferase system, phosphoenolpyruvate-dependent sugar EIIA 2|Phosphotransferase/anion transporter	GO:0005215|GO:0005351|GO:0006810|GO:0008982|GO:0009401|GO:0016021	G3DSA:3.40.930.10|PF00359|PS00372|PS51094|SSF55804|TIGR00848
frvB|frvB|AP_003909.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003352|IPR003353|IPR003501|IPR006327|IPR013011|IPR013014	Phosphotransferase system, EIIB component, type 2|Phosphotransferase system, EIIB component, type 2/3|Phosphotransferase system, EIIC|Phosphotransferase system, EIIC component, type 2|Phosphotransferase system, fructose IIC component|Phosphotransferase system, fructose-specific IIB subunit	GO:0005351|GO:0008982|GO:0009401|GO:0016020|GO:0016021	G3DSA:3.40.50.2300|PF02302|PF02378|PS51099|PS51104|PTHR30505|PTHR30505:SF0|SSF52794|TIGR00829|TIGR01427
frvR|frvR|AP_003911.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002178|IPR011991|IPR013196|IPR016152	Helix-turn-helix, type 11|Phosphotransferase system, phosphoenolpyruvate-dependent sugar EIIA 2|Phosphotransferase/anion transporter|Winged helix-turn-helix DNA-binding domain	GO:0005215|GO:0005351|GO:0006810|GO:0009401	G3DSA:1.10.10.10|G3DSA:3.40.930.10|PF00359|PF08279|SSF46785|SSF55804
frvX|frvX|AP_003910.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR008007|IPR023367	Peptidase M42|Peptidase M42, domain 2		G3DSA:2.40.30.40|G3DSA:3.40.630.10|PF05343|PIRSF001123|PTHR32481|PTHR32481:SF0|SSF101821|SSF53187
frwB|frwB|AP_003860.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003353|IPR003501|IPR013011	Phosphotransferase system, EIIB component, type 2|Phosphotransferase system, EIIB component, type 2/3|Phosphotransferase system, fructose-specific IIB subunit	GO:0005351|GO:0008982|GO:0009401|GO:0016020	G3DSA:3.40.50.2300|PF02302|PS51099|PTHR30505|PTHR30505:SF0|SSF52794|TIGR00829
frwC|frwC|AP_003861.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR006327|IPR013014	Phosphotransferase system, EIIC component, type 2|Phosphotransferase system, fructose IIC component	GO:0005351|GO:0008982|GO:0009401|GO:0016021	PS51104|PTHR30505|PTHR30505:SF0|TIGR01427
frwD|frwD|AP_003857.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003353|IPR003501|IPR013011	Phosphotransferase system, EIIB component, type 2|Phosphotransferase system, EIIB component, type 2/3|Phosphotransferase system, fructose-specific IIB subunit	GO:0005351|GO:0008982|GO:0009401|GO:0016020	G3DSA:3.40.50.2300|PF02302|PS51099|PTHR30505|PTHR30505:SF0|SSF52794|TIGR00829
fsaA|fsaA|AP_001456.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001585|IPR004731|IPR013785|IPR018225|IPR023001	Aldolase-type TIM barrel|Fructose-6-phosphate aldolase|Transaldolase|Transaldolase 3A/3B|Transaldolase, active site	GO:0003824|GO:0005975|GO:0016832	G3DSA:3.20.20.70|MF_00496|PF00923|PS00958|PS01054|PTHR10683|SSF51569|TIGR00875
fsaB|fsaB|AP_003863.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001585|IPR004731|IPR013785|IPR018225|IPR023001	Aldolase-type TIM barrel|Fructose-6-phosphate aldolase|Transaldolase|Transaldolase 3A/3B|Transaldolase, active site	GO:0003824|GO:0005975|GO:0016832	G3DSA:3.20.20.70|MF_00496|PF00923|PS00958|PS01054|PTHR10683|SSF51569|TIGR00875
fsr|fsr|AP_001128.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR011701|IPR016196|IPR020846	Major facilitator superfamily|Major facilitator superfamily domain|Major facilitator superfamily domain, general substrate transporter	GO:0016021|GO:0055085	G3DSA:1.20.1250.20|PF07690|PS50850|PTHR24003|PTHR24003:SF225|SSF103473
ftn|ftn|AP_002523.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001519|IPR008331|IPR009040|IPR009078|IPR012347	Ferritin|Ferritin- like diiron domain|Ferritin-like superfamily|Ferritin-related|Ferritin/DPS protein domain	GO:0006826|GO:0006879|GO:0008199|GO:0016491|GO:0046914|GO:0055114	G3DSA:1.20.1260.10|PF00210|PS50905|PTHR11431|PTHR11431:SF4|SSF47240
ftsA|ftsA|AP_000757.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003494|IPR020823	Cell division protein FtsA|SHS2 domain inserted in FtsA	GO:0005515|GO:0007049	G3DSA:3.30.420.40|G3DSA:3.90.640.10|PF02491|PF14450|PIRSF003101|PTHR32432|PTHR32432:SF0|SM00842|SSF53067|TIGR01174
ftsB|ftsB|AP_003315.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR007060|IPR023081	Cell division protein FtsB|Septum formation initiator	GO:0007049	MF_00599|PF04977
ftsE|ftsE|AP_004329.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003439|IPR003593|IPR005286|IPR017871|IPR027417	AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|Cell division protein  FtsE, ATP-binding|P-loop containing nucleoside triphosphate hydrolase	GO:0000166|GO:0005524|GO:0016887|GO:0017111|GO:0051301	G3DSA:3.40.50.300|PF00005|PS00211|PS50893|PTHR24220|PTHR24220:SF174|SM00382|SSF52540|TIGR02673
ftsH|ftsH|AP_003721.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000642|IPR003593|IPR003959|IPR003960|IPR005936|IPR011546|IPR027417	AAA+ ATPase domain|ATPase, AAA-type, conserved site|ATPase, AAA-type, core|P-loop containing nucleoside triphosphate hydrolase|Peptidase M41|Peptidase M41, FtsH extracellular|Peptidase, FtsH	GO:0000166|GO:0004222|GO:0005524|GO:0006508|GO:0008270|GO:0016020|GO:0016021|GO:0017111|GO:0030163	G3DSA:1.10.8.60|G3DSA:3.40.50.300|MF_01458|PF00004|PF01434|PF06480|PS00674|PTHR23076|PTHR23076:SF10|SM00382|SSF140990|SSF52540|TIGR01241
ftsI|ftsI|AP_000747.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001460|IPR005311|IPR012338	Beta-lactamase/transpeptidase-like|Penicillin-binding protein, dimerisation domain|Penicillin-binding protein, transpeptidase	GO:0008658	G3DSA:3.40.710.10|G3DSA:3.90.1310.10|PF00905|PF03717|PTHR30627|PTHR30627:SF0|SSF56519|SSF56601
ftsK|ftsK|AP_001520.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002543|IPR018541|IPR025199|IPR027417	Cell division protein FtsK/SpoIIIE|DNA translocase FtsK gamma|Domain of unknown function DUF4117|P-loop containing nucleoside triphosphate hydrolase	GO:0000166|GO:0003677|GO:0005524|GO:0007049|GO:0007059|GO:0016021|GO:0051301	G3DSA:3.40.50.300|PF01580|PF09397|PF13491|PS50901|PTHR22683|PTHR22683:SF1|SM00843|SSF46785|SSF52540
ftsL|ftsL|AP_000746.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR011922	Cell division protein, FtsL -like	GO:0007049|GO:0016021|GO:0051301	PF04999|TIGR02209
ftsN|ftsN|AP_003876.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR007730|IPR011930	Cell division protein FtsN|Sporulation-related domain	GO:0005515	G3DSA:3.30.70.1070|PF05036|PTHR11064|PTHR11064:SF5|SSF110997|TIGR02223
ftsQ|ftsQ|AP_000756.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR005548|IPR013685|IPR026579	Cell division protein FtsQ|Cell division protein FtsQ/DivIB|Polypeptide-transport-associated, FtsQ-type	GO:0000917	MF_00911|PF03799|PF08478
ftsW|ftsW|AP_000752.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001182|IPR013437|IPR018365	Cell cycle protein FtsW/RodA|Cell cycle, FtsW / RodA / SpoVE, conserved site|Cell division protein FtsW	GO:0007049|GO:0009252|GO:0016021|GO:0051301	MF_00913|PF01098|PS00428|PTHR30474|PTHR30474:SF2|TIGR02614
ftsX|ftsX|AP_004330.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003838|IPR004513	ABC transporter, cell division protein FtsX|Permease FtsX-like	GO:0007049|GO:0016020|GO:0016021	PF02687|PIRSF003097|TIGR00439
ftsY|ftsY|AP_004328.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000897|IPR003593|IPR004390|IPR013822|IPR027417	AAA+ ATPase domain|P-loop containing nucleoside triphosphate hydrolase|Signal recognition particle, SRP54 subunit, GTPase domain|Signal recognition particle, SRP54 subunit, helical bundle|Signal-recognition particle receptor FtsY	GO:0000166|GO:0005525|GO:0006184|GO:0006614|GO:0017111	G3DSA:1.20.120.140|G3DSA:3.40.50.300|MF_00920|PF00448|PF02881|PS00300|PTHR11564|PTHR11564:SF6|SM00382|SM00962|SM00963|SSF47364|SSF52540|TIGR00064
ftsZ|ftsZ|AP_000758.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000158|IPR003008|IPR008280|IPR018316|IPR020805|IPR024757	Cell division protein FtsZ|Cell division protein FtsZ, C-terminal|Cell division protein FtsZ, conserved site|Tubulin/FtsZ, 2-layer sandwich domain|Tubulin/FtsZ, C-terminal|Tubulin/FtsZ, GTPase domain	GO:0003924|GO:0005525|GO:0005737|GO:0006184|GO:0043234|GO:0051258	G3DSA:3.30.1330.20|G3DSA:3.40.50.1440|MF_00909|PF00091|PF12327|PR00423|PS01134|PS01135|PTHR30314|PTHR30314:SF0|SM00864|SM00865|SSF52490|SSF55307|TIGR00065
fucA|fucA|AP_003366.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001303|IPR004782	Class II aldolase/adducin N-terminal|L-fucose phosphate aldolase	GO:0006004|GO:0008270|GO:0008738|GO:0046872	G3DSA:3.40.225.10|PF00596|PTHR22789|SM01007|SSF53639|TIGR01086
fucI|fucI|AP_003368.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004216|IPR005763|IPR009015|IPR012888|IPR012889|IPR015888	L-fucose isomerase|L-fucose isomerase, C-terminal|L-fucose isomerase, N-terminal-1|L-fucose isomerase, N-terminal-2|L-fucose isomerase, N-terminal/central domain|L-fucose/L-arabinose isomerase, C-terminal	GO:0005737|GO:0005996|GO:0006004|GO:0008736|GO:0016861|GO:0019317|GO:0030145	G3DSA:3.20.14.10|G3DSA:3.40.275.10|G3DSA:3.40.50.1070|MF_01254|PF02952|PF07881|PF07882|SSF50443|SSF53743|TIGR01089
fucK|fucK|AP_003369.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR013450|IPR018483|IPR018484|IPR018485	Carbohydrate kinase, FGGY, C-terminal|Carbohydrate kinase, FGGY, N-terminal|Carbohydrate kinase, FGGY, conserved site|L-fuculokinase	GO:0005975|GO:0008737|GO:0016773	G3DSA:3.30.420.40|PF00370|PF02782|PS00445|PS00933|PTHR10196|PTHR10196:SF6|SSF53067|TIGR02628
fucO|fucO|AP_003365.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001670|IPR013460|IPR018211	Alcohol dehydrogenase, iron-type|Alcohol dehydrogenase, iron-type, conserved site|Lactaldehyde reductase	GO:0016491|GO:0046872|GO:0055114	G3DSA:1.20.1090.10|G3DSA:3.40.50.1970|PF00465|PS00060|PS00913|PTHR11496|PTHR11496:SF46|SSF56796|TIGR02638
fucP|fucP|AP_003367.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR005275|IPR011701|IPR016196	L-fucose permease FucP|Major facilitator superfamily|Major facilitator superfamily domain, general substrate transporter	GO:0015150|GO:0015756|GO:0016021|GO:0055085	G3DSA:1.20.1250.20|PF07690|PTHR24003|SSF103473|TIGR00885
fucR|fucR|AP_003371.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001034|IPR011991|IPR014036|IPR018356	DeoR C-terminal sensor domain|HTH DeoR N-terminal domain|Transcription regulator, HTH DeoR-type, conserved site|Winged helix-turn-helix DNA-binding domain	GO:0003700|GO:0005622|GO:0006355	G3DSA:1.10.10.10|G3DSA:3.40.50.1360|PF00455|PF08220|PR00037|PS00894|PS51000|PTHR30363|PTHR30363:SF0|SM00420|SSF100950|SSF46785
fucU|fucU|AP_003370.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR007721|IPR023750	D-ribose pyranase RbsD-like|D-ribose pyranase RbsD/L-fucose mutarotase FucU	GO:0005996|GO:0016853|GO:0048029	G3DSA:3.40.1650.10|PF05025|PTHR31690|PTHR31690:SF0|SSF102546
fumA|fumA|AP_002233.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004646|IPR004647|IPR011167|IPR020557	Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain|Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain|Fumarate lyase, conserved site|Iron-dependent fumarate hydratase	GO:0003824|GO:0004333|GO:0006091|GO:0016829|GO:0016836	G3DSA:3.20.130.10|PF05681|PF05683|PIRSF001394|PS00163|PTHR30389|PTHR30389:SF0|SSF117457|TIGR00722|TIGR00723
fumB|fumB|AP_004623.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004646|IPR004647|IPR011167|IPR020557	Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain|Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain|Fumarate lyase, conserved site|Iron-dependent fumarate hydratase	GO:0003824|GO:0004333|GO:0006091|GO:0016829|GO:0016836	G3DSA:3.20.130.10|PF05681|PF05683|PIRSF001394|PS00163|PTHR30389|PTHR30389:SF0|SSF117457|TIGR00722|TIGR00723
fumC|fumC|AP_002232.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000362|IPR005677|IPR008948|IPR018951|IPR020557|IPR022761|IPR024083	Fumarase C, C-terminal|Fumarase/histidase, N-terminal|Fumarate hydratase, class II|Fumarate lyase|Fumarate lyase, N-terminal|Fumarate lyase, conserved site|L-Aspartase-like	GO:0003824|GO:0004333|GO:0006099|GO:0006106|GO:0016829|GO:0045239	G3DSA:1.10.275.10|G3DSA:1.10.40.30|G3DSA:1.20.200.10|MF_00743|PF00206|PF10415|PR00149|PS00163|PTHR11444|PTHR11444:SF1|SSF48557|TIGR00979
fur|fur|AP_001321.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002481|IPR011991	Ferric-uptake regulator|Winged helix-turn-helix DNA-binding domain	GO:0003700|GO:0006355	G3DSA:1.10.10.10|PF01475|SSF46785
fusA|fusA|AP_004450.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000640|IPR000795|IPR004161|IPR004540|IPR005225|IPR005517|IPR009000|IPR009022|IPR014721|IPR020568|IPR027417	Elongation factor G, III-V domain|Elongation factor, GTP-binding domain|P-loop containing nucleoside triphosphate hydrolase|Ribosomal protein S5 domain 2-type fold|Ribosomal protein S5 domain 2-type fold, subgroup|Small GTP-binding protein domain|Translation elongation factor EFG, V domain|Translation elongation factor EFG/EF2|Translation elongation factor EFG/EF2, domain IV|Translation elongation factor EFTu/EF1A, domain 2|Translation elongation/initiation factor/Ribosomal, beta-barrel	GO:0003746|GO:0003924|GO:0005525|GO:0005622|GO:0006414	G3DSA:2.40.30.10|G3DSA:3.30.230.10|G3DSA:3.30.70.240|G3DSA:3.30.70.870|G3DSA:3.40.50.300|MF_00054_B|PF00009|PF00679|PF03144|PF03764|PR00315|PS00301|PTHR23115|PTHR23115:SF13|SM00838|SM00889|SSF50447|SSF52540|SSF54211|SSF54980|TIGR00231|TIGR00484
fxsA|fxsA|AP_004641.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR007313	FxsA cytoplasmic membrane protein	GO:0016020	PF04186
gabD|gabD|AP_003234.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR010102|IPR015590|IPR016160|IPR016161|IPR016162|IPR016163	Aldehyde dehydrogenase domain|Aldehyde dehydrogenase, C-terminal|Aldehyde dehydrogenase, N-terminal|Aldehyde dehydrogenase, conserved site|Aldehyde/histidinol dehydrogenase|Succinate semialdehyde dehydrogenase	GO:0008152|GO:0009013|GO:0009450|GO:0016491|GO:0016620|GO:0055114	G3DSA:3.40.309.10|G3DSA:3.40.605.10|PF00171|PS00070|PS00687|PTHR11699|PTHR11699:SF49|SSF53720|TIGR01780
gabP|gabP|AP_003236.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002293|IPR004840|IPR004841|IPR011265	Amino acid permease domain|Amino acid permease, conserved site|Amino acid/polyamine transporter I|GABA permease	GO:0003333|GO:0006810|GO:0006865|GO:0015171|GO:0015185|GO:0015812|GO:0016020|GO:0016021|GO:0055085	PF00324|PIRSF006060|PS00218|PTHR11785|PTHR11785:SF24|TIGR01773
gabT|gabT|AP_003235.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004632|IPR005814|IPR015421|IPR015422|IPR015424	4-aminobutyrate aminotransferase, bacterial|Aminotransferase class-III|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2	GO:0003824|GO:0003867|GO:0008483|GO:0009448|GO:0030170	G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF00202|PIRSF000521|PS00600|PTHR11986|PTHR11986:SF17|SSF53383|TIGR00700
gadA|gadA|AP_004276.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002129|IPR010107|IPR015421|IPR015424|IPR021115	Glutamate decarboxylase|Pyridoxal phosphate-dependent decarboxylase|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal-phosphate binding site	GO:0003824|GO:0004351|GO:0006536|GO:0016831|GO:0019752|GO:0030170	G3DSA:3.40.640.10|PF00282|PS00392|PTHR11999|PTHR11999:SF1|SSF53383|TIGR01788
gadB|gadB|AP_002116.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002129|IPR010107|IPR015421|IPR015424|IPR021115	Glutamate decarboxylase|Pyridoxal phosphate-dependent decarboxylase|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal-phosphate binding site	GO:0003824|GO:0004351|GO:0006536|GO:0016831|GO:0019752|GO:0030170	G3DSA:3.40.640.10|PF00282|PS00392|PTHR11999|PTHR11999:SF1|SSF53383|TIGR01788
gadC|gadC|AP_002115.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002293|IPR004759	Amino acid/polyamine transporter I|Glutamate:g-aminobutyrate antiporter	GO:0003333|GO:0006865|GO:0015171|GO:0016020|GO:0016021	PF13520|PIRSF006060|PTHR11785|PTHR11785:SF129|TIGR00910
gadE|gadE|AP_004281.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000792|IPR011991|IPR013022|IPR016032	Signal transduction response regulator, C-terminal effector|Transcription regulator LuxR, C-terminal|Winged helix-turn-helix DNA-binding domain|Xylose isomerase-like, TIM barrel domain	GO:0003677|GO:0003700|GO:0005622|GO:0006355|GO:0043565	G3DSA:1.10.10.10|G3DSA:3.20.20.150|PF00196|PS50043|SSF46894
gadW|gadW|AP_004278.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR009057|IPR018060|IPR018062|IPR020449	DNA binding HTH domain, AraC-type|HTH domain AraC-type, conserved site|Homeodomain-like|Transcription regulator HTH, AraC- type	GO:0003677|GO:0003700|GO:0005622|GO:0006355|GO:0043565	G3DSA:1.10.10.60|PF00165|PR00032|PS00041|PS01124|PTHR11019|SM00342|SSF46689
gadX|gadX|AP_004277.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR009057|IPR018060|IPR018062|IPR020449	DNA binding HTH domain, AraC-type|HTH domain AraC-type, conserved site|Homeodomain-like|Transcription regulator HTH, AraC- type	GO:0003677|GO:0003700|GO:0005622|GO:0006355|GO:0043565	G3DSA:1.10.10.60|PF00165|PR00032|PS00041|PS01124|PTHR11019|PTHR11019:SF11|SM00342|SSF46689
galE|galE|AP_001390.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001509|IPR005886|IPR016040|IPR025308	NAD(P)-binding domain|NAD-dependent epimerase/dehydratase|UDP-glucose 4-epimerase C-terminal domain|UDP-glucose 4-epimerase GalE	GO:0003824|GO:0003978|GO:0006012|GO:0044237|GO:0050662	G3DSA:3.40.50.720|G3DSA:3.90.25.10|PF01370|PF13950|PTHR10366|PTHR10366:SF39|SSF51735|TIGR01179
galF|galF|AP_002642.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR005774|IPR005835	Nucleotidyl transferase|UTP-glucose pyrophosphorylase, regulatory subunit	GO:0006011|GO:0009058|GO:0016779|GO:0030234	G3DSA:3.90.550.10|PF00483|PTHR22572|PTHR22572:SF14|SSF53448|TIGR01105
galK|galK|AP_001388.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000705|IPR006203|IPR006204|IPR006206|IPR013750|IPR014721|IPR019539|IPR019741|IPR020568|IPR022963	GHMP kinase N-terminal domain|GHMP kinase, ATP-binding, conserved site|GHMP kinase, C-terminal domain|Galactokinase|Galactokinase galactose-binding domain|Galactokinase, bacterial|Galactokinase, conserved site|Mevalonate/galactokinase|Ribosomal protein S5 domain 2-type fold|Ribosomal protein S5 domain 2-type fold, subgroup	GO:0004335|GO:0005524|GO:0005737|GO:0006012|GO:0008152|GO:0016301|GO:0016773|GO:0046835	G3DSA:3.30.230.10|G3DSA:3.30.70.890|MF_00246|PF00288|PF08544|PF10509|PIRSF000530|PR00473|PR00959|PS00106|PS00627|PTHR10457|PTHR10457:SF6|SSF54211|SSF55060|TIGR00131
galM|galM|AP_001387.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR008183|IPR011013|IPR013458|IPR014718|IPR015443|IPR018052	Aldose 1-/Glucose-6-phosphate 1-epimerase|Aldose 1-epimerase|Aldose 1-epimerase, bacterial|Aldose 1-epimerase, conserved site|Galactose mutarotase-like domain|Glycoside hydrolase-type carbohydrate-binding, subgroup	GO:0003824|GO:0004034|GO:0005975|GO:0006012|GO:0016853|GO:0019318|GO:0030246	G3DSA:2.70.98.10|PF01263|PIRSF005096|PS00545|PTHR10091|PTHR10091:SF0|SSF74650|TIGR02636
galP|galP|AP_003500.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003663|IPR005828|IPR005829|IPR016196|IPR020846	General substrate transporter|Major facilitator superfamily domain|Major facilitator superfamily domain, general substrate transporter|Sugar transporter, conserved site|Sugar/inositol transporter	GO:0005215|GO:0006810|GO:0016020|GO:0016021|GO:0022857|GO:0022891|GO:0055085	G3DSA:1.20.1250.20|PF00083|PR00171|PS00216|PS00217|PS50850|PTHR24063|PTHR24063:SF151|SSF103473|TIGR00879
galR|galR|AP_003400.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000843|IPR010982	Lambda repressor-like, DNA-binding domain|Transcription regulator HTH, LacI	GO:0003677|GO:0003700|GO:0005622|GO:0006355	G3DSA:1.10.260.40|G3DSA:3.40.50.2300|PF00356|PF13377|PR00036|PS00356|PS50932|PTHR30146|PTHR30146:SF7|SM00354|SSF47413|SSF53822
galS|galS|AP_002748.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000843|IPR010982	Lambda repressor-like, DNA-binding domain|Transcription regulator HTH, LacI	GO:0003677|GO:0003700|GO:0005622|GO:0006355	G3DSA:1.10.260.40|G3DSA:3.40.50.2300|PF00356|PF13377|PR00036|PS00356|PS50932|PTHR30146|PTHR30146:SF7|SM00354|SSF47413|SSF53822
galT|galT|AP_001389.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001937|IPR005849|IPR005850|IPR011146|IPR019779	Galactose-1-phosphate uridyl transferase, C-terminal|Galactose-1-phosphate uridyl transferase, N-terminal|Galactose-1-phosphate uridyl transferase, class I|Galactose-1-phosphate uridyl transferase, class I His-active site|HIT-like domain	GO:0003824|GO:0006012|GO:0008108|GO:0008270	G3DSA:3.30.428.10|PF01087|PF02744|PIRSF000808|PS00117|PTHR11943|SSF54197|TIGR00209
galU|galU|AP_001862.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR005771|IPR005835	Nucleotidyl transferase|UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type	GO:0003983|GO:0006011|GO:0009058|GO:0016779	G3DSA:3.90.550.10|PF00483|PTHR22572|PTHR22572:SF14|SSF53448|TIGR01099
gapA|gapA|AP_002398.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR006424|IPR016040|IPR020828|IPR020829|IPR020830|IPR020831	Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain|Glyceraldehyde 3-phosphate dehydrogenase, active site|Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain|Glyceraldehyde-3-phosphate dehydrogenase, type I|Glyceraldehyde/Erythrose phosphate dehydrogenase family|NAD(P)-binding domain	GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114	G3DSA:3.30.360.10|G3DSA:3.40.50.720|PF00044|PF02800|PIRSF000149|PR00078|PS00071|PTHR10836|SM00846|SSF51735|SSF55347|TIGR01534
garD|garD|AP_003674.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR007392|IPR013974|IPR017654	D-galactarate dehydratase/Altronate hydrolase, C-terminal|Galactarate dehydratase|SAF domain	GO:0008867|GO:0016836|GO:0019582	PF04295|PF08666|PTHR30536|PTHR30536:SF1|SM00858|TIGR03248
garK|garK|AP_003670.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004381|IPR018193	Glycerate kinase|Glycerate kinase, flavodoxin-like domain	GO:0008887|GO:0031388	G3DSA:3.90.1510.10|PF02595|PIRSF006078|PTHR21599|SSF110738|TIGR00045
garL|garL|AP_003672.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR005000|IPR015813|IPR017648	2-dehydro-3-deoxyglucarate aldolase, GarL|Aldehyde-lyase domain|Pyruvate/Phosphoenolpyruvate kinase-like domain	GO:0003824|GO:0006725|GO:0008672|GO:0016830	G3DSA:3.20.20.60|MF_01291|PF03328|PTHR30502|SSF51621|TIGR03239
garP|garP|AP_003673.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004744|IPR011701|IPR016196|IPR020846	D-galactonate transporter|Major facilitator superfamily|Major facilitator superfamily domain|Major facilitator superfamily domain, general substrate transporter	GO:0005215|GO:0006810|GO:0016021|GO:0055085	G3DSA:1.20.1250.20|PF07690|PS50850|PTHR11662|PTHR11662:SF18|SSF103473|TIGR00893
garR|garR|AP_003671.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002204|IPR006115|IPR006398|IPR008927|IPR013328|IPR015815|IPR016040	2-hydroxy-3-oxopropionate reductase|3-hydroxyisobutyrate dehydrogenase-related, conserved site|6-phosphogluconate dehydrogenase, C-terminal-like|6-phosphogluconate dehydrogenase, NADP-binding|Dehydrogenase, multihelical|Hydroxy monocarboxylic acid anion dehydrogenase, HIBADH-type|NAD(P)-binding domain	GO:0004616|GO:0006098|GO:0006573|GO:0008442|GO:0008679|GO:0016491|GO:0016616|GO:0046487|GO:0050662|GO:0055114	G3DSA:1.10.1040.10|G3DSA:3.40.50.720|PF03446|PIRSF000103|PS00895|PTHR22981|PTHR22981:SF29|SSF48179|SSF51735|TIGR01505
gatA|gatA|AP_002690.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002178|IPR016152	Phosphotransferase system, phosphoenolpyruvate-dependent sugar EIIA 2|Phosphotransferase/anion transporter	GO:0005215|GO:0005351|GO:0006810|GO:0009401	G3DSA:3.40.930.10|PF00359|SSF55804
gatA|gatA|AP_002692.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002178|IPR016152	Phosphotransferase system, phosphoenolpyruvate-dependent sugar EIIA 2|Phosphotransferase/anion transporter	GO:0005215|GO:0005351|GO:0006810|GO:0009401	G3DSA:3.40.930.10|PF00359|PS51094|SSF55804
gatB|gatB|AP_002689.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003501|IPR013011	Phosphotransferase system, EIIB component, type 2|Phosphotransferase system, EIIB component, type 2/3	GO:0005351|GO:0008982|GO:0009401	G3DSA:3.40.50.270|PF02302|PS51099|SSF52794
gatC|gatC|AP_002688.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004703|IPR013014|IPR013853	Galactitol permease IIC component|Phosphotransferase system, EIIC component, type 2|Phosphotransferase system, sugar-specific permease component	GO:0009401|GO:0015577|GO:0015796|GO:0016021	PF03611|PIRSF006304|PS51104|PTHR30321|TIGR00827
gatD|gatD|AP_002687.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002085|IPR002328|IPR011032|IPR013149|IPR013154|IPR016040	Alcohol dehydrogenase GroES-like|Alcohol dehydrogenase superfamily, zinc-type|Alcohol dehydrogenase, C-terminal|Alcohol dehydrogenase, zinc-type, conserved site|GroES-like|NAD(P)-binding domain	GO:0008270|GO:0016491|GO:0055114	G3DSA:3.40.50.720|G3DSA:3.90.180.10|PF00107|PF08240|PS00059|PTHR11695|PTHR11695:SF38|SSF50129|SSF51735
gatY|gatY|AP_002694.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000771|IPR011288|IPR013785|IPR023955	Aldolase-type TIM barrel|D-tagatose-bisphosphate aldolase, class II, subunit GatY|D-tagatose-bisphosphate aldolase, class II, subunit KbaY/GatY|Ketose-bisphosphate aldolase, class-II	GO:0003824|GO:0005975|GO:0008270|GO:0009025|GO:0016832|GO:0019404|GO:2001059	G3DSA:3.20.20.70|MF_01294|PF01116|PIRSF001359|PS00602|PS00806|PTHR30304|SSF51569|TIGR00167|TIGR01858
gatZ|gatZ|AP_002693.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR012062|IPR013785|IPR023436	Aldolase-type TIM barrel|D-tagatose-bisphosphate aldolase, class II, non-catalytic subunit  GatZ/KbaZ|D-tagatose-bisphosphate aldolase, class II, non-catalytic subunit GatZ	GO:0003824|GO:0019402	G3DSA:1.10.400.20|G3DSA:3.20.20.70|MF_01296|PF08013|PIRSF009264|PTHR32502|PTHR32502:SF0|SSF51569|TIGR02810
gcd|gcd|AP_000785.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002372|IPR011047|IPR017511|IPR018391|IPR027295	PQQ-dependent membrane bound dehydrogenase, glucose/quinate/shikimate-related|Pyrrolo-quinoline quinone beta-propeller repeat|Pyrrolo-quinoline quinone repeat|Quinonprotein alcohol dehydrogenase-like domain|Quinonprotein alcohol dehydrogenase-like superfamily	GO:0016021|GO:0016614|GO:0048038|GO:0055114	G3DSA:2.140.10.10|PF01011|PF13360|PTHR32303|PTHR32303:SF0|SM00564|SSF50998|TIGR03074
gcl|gcl|AP_001155.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR006397|IPR011766|IPR012000|IPR012001	Glyoxylate carboligase|Thiamine pyrophosphate enzyme, C-terminal TPP-binding|Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain|Thiamine pyrophosphate enzyme, central domain	GO:0000287|GO:0003824|GO:0009028|GO:0009436|GO:0030976	G3DSA:3.40.50.1220|G3DSA:3.40.50.970|PF00205|PF02775|PF02776|PTHR18968|PTHR18968:SF14|SSF52467|SSF52518|TIGR01504
gcvA|gcvA|AP_003374.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000847|IPR005119|IPR011991	LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain	GO:0003700|GO:0006355	G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PR00039|PS50931|PTHR30537|PTHR30537:SF0|SSF46785|SSF53850
gcvH|gcvH|AP_003463.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002930|IPR003016|IPR011053|IPR017453	2-oxo acid dehydrogenase, lipoyl-binding site|Glycine cleavage H-protein|Glycine cleavage H-protein, subgroup|Single hybrid motif	GO:0005960|GO:0006546|GO:0019464	G3DSA:2.40.50.100|MF_00272|PF01597|PS00189|PTHR11715|PTHR11715:SF0|SSF51230|TIGR00527
gcvP|gcvP|AP_003462.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003437|IPR015421|IPR015424|IPR020580|IPR020581	Glycine cleavage system P protein|Glycine cleavage system P protein, homodimeric|Glycine cleavage system P-protein, N-terminal|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1	GO:0003824|GO:0004375|GO:0006544|GO:0006546|GO:0030170|GO:0055114	G3DSA:3.40.640.10|MF_00711|PF02347|PTHR11773|PTHR11773:SF0|SSF53383|TIGR00461
gcvR|gcvR|AP_003065.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002912|IPR016867	ACT domain|Glycine cleavage repressor GcvR	GO:0008152|GO:0016597	G3DSA:3.30.70.260|PF01842|PF13740|PIRSF028103|SSF55021
gcvT|gcvT|AP_003464.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR006222|IPR006223|IPR013977|IPR022903|IPR027266	Aminomethyltransferase|GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1|Glycine cleavage T-protein, C-terminal barrel|Glycine cleavage T-protein, N-terminal|Glycine cleavage system T protein	GO:0004047|GO:0005515|GO:0005737|GO:0006546	G3DSA:2.40.30.110|G3DSA:3.30.1360.120|G3DSA:3.30.70.1400|MF_00259|PF01571|PF08669|PIRSF006487|PTHR13847|PTHR13847:SF5|SSF101790|SSF103025|TIGR00528
gdhA|gdhA|AP_002380.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR006095|IPR006096|IPR006097|IPR014362|IPR016040	Glutamate dehydrogenase|Glutamate/phenylalanine/leucine/valine dehydrogenase|Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal|Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain|NAD(P)-binding domain	GO:0006520|GO:0016491|GO:0016639|GO:0055114	G3DSA:1.10.285.10|G3DSA:3.40.192.10|G3DSA:3.40.50.720|PF00208|PF02812|PIRSF000185|PR00082|PS00074|PTHR11606|PTHR11606:SF4|SM00839|SSF51735|SSF53223
ggt|ggt|AP_004345.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000101	Gamma-glutamyltranspeptidase	GO:0003840|GO:0006749	PF01019|PR01210|PS00462|PS51257|PTHR11686|SSF56235|TIGR00066
gidA|gidA|AP_004046.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002218|IPR004416|IPR020595|IPR026904	GidA associated domain 3|Glucose-inhibited division protein A|Glucose-inhibited division protein A-related|Glucose-inhibited division protein A-related, conserved site	GO:0002098|GO:0008033|GO:0050660	G3DSA:3.50.50.60|MF_00129|PF01134|PF13932|PS01280|PS01281|PTHR11806|SSF51905|TIGR00136
gidB|gidB|AP_004047.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003682	rRNA small subunit methyltransferase G	GO:0005737|GO:0006364|GO:0008649	G3DSA:3.40.50.150|MF_00074|PF02527|PIRSF003078|PTHR31760|PTHR31760:SF0|SSF53335|TIGR00138
glcB|glcB|AP_003530.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001465|IPR006253|IPR011076|IPR023310	Malate synthase|Malate synthase G|Malate synthase G, beta sub-domain|Malate synthase-like	GO:0003824|GO:0004474|GO:0006097	G3DSA:1.10.1860.10|G3DSA:1.20.1220.12|G3DSA:2.170.170.11|G3DSA:3.20.20.360|MF_00641|PF01274|PTHR21631|PTHR21631:SF1|SSF51645|TIGR01345
glcC|glcC|AP_003535.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000524|IPR008920|IPR011711|IPR011991|IPR027376	FadR/GntR C-terminal domain|Fatty acid responsive transcription factor FadR, C-terminal|GntR, C-terminal|Transcription regulator HTH, GntR|Winged helix-turn-helix DNA-binding domain	GO:0000062|GO:0003677|GO:0003700|GO:0005622|GO:0006355|GO:0019217	G3DSA:1.10.10.10|G3DSA:1.20.120.530|PF00392|PF07729|PR00035|PS50949|PTHR11751|PTHR11751:SF179|SM00345|SM00895|SSF46785|SSF48008
glcD|glcD|AP_003534.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004113|IPR004490|IPR006094|IPR016164|IPR016166|IPR016167|IPR016169|IPR016171	CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2|FAD linked oxidase, N-terminal|FAD-binding, type 2|FAD-binding, type 2, subdomain 1|FAD-linked oxidase, C-terminal|FAD-linked oxidase-like, C-terminal|Glycolate oxidase subunit GlcD|Vanillyl-alcohol oxidase, C-terminal subdomain 2	GO:0003824|GO:0008762|GO:0008891|GO:0009339|GO:0016491|GO:0016614|GO:0050660|GO:0055114	G3DSA:1.10.45.10|G3DSA:3.30.43.10|G3DSA:3.30.465.10|PF01565|PF02913|PS51387|PTHR11748|PTHR11748:SF9|SSF55103|SSF56176|TIGR00387
glcE|glcE|AP_003533.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR006094|IPR016164|IPR016166|IPR016169|IPR016171	CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2|FAD linked oxidase, N-terminal|FAD-binding, type 2|FAD-linked oxidase-like, C-terminal|Vanillyl-alcohol oxidase, C-terminal subdomain 2	GO:0003824|GO:0008762|GO:0016491|GO:0016614|GO:0050660|GO:0055114	G3DSA:1.10.45.10|G3DSA:3.30.465.10|PF01565|PS51387|PTHR11748|PTHR11748:SF1|SSF55103|SSF56176
glcF|glcF|AP_003532.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004017|IPR012257|IPR012285|IPR017896	4Fe-4S ferredoxin-type, iron-sulpur binding domain|Cysteine-rich domain|Fumarate reductase, C-terminal|Glycolate oxidase, iron-sulphur subunit	GO:0016491|GO:0051536|GO:0055114	G3DSA:1.10.1060.10|PF02754|PF13183|PIRSF000139|PTHR11921|PTHR11921:SF7|SSF54862
glcG|glcG|AP_003531.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR005624	Domain of unknown function DUF336		PF03928|SSF143744
gldA|gldA|AP_003864.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001670|IPR016205|IPR018211	Alcohol dehydrogenase, iron-type|Alcohol dehydrogenase, iron-type, conserved site|Glycerol dehydrogenase	GO:0016491|GO:0016614|GO:0046872|GO:0055114	G3DSA:1.20.1090.10|G3DSA:3.40.50.1970|PF00465|PIRSF000112|PS00060|PS00913|PTHR11496|SSF56796
glf|glf|AP_002636.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004379|IPR015899|IPR016040	NAD(P)-binding domain|UDP-galactopyranose mutase|UDP-galactopyranose mutase, C-terminal	GO:0008767	G3DSA:3.40.50.720|PF03275|PF13450|PTHR21197|SSF51971|SSF54373|TIGR00031
glgA|glgA|AP_004362.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001296|IPR011835|IPR013534	Glycogen/starch synthase, ADP-glucose type|Glycosyl transferase, family 1|Starch synthase, catalytic domain	GO:0009011|GO:0009058|GO:0009250	G3DSA:3.40.50.2000|MF_00484|PF00534|PF08323|PTHR12526|PTHR12526:SF17|SSF53756|TIGR02095
glgB|glgB|AP_004359.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004193|IPR006047|IPR006048|IPR006407|IPR013780|IPR013781|IPR013783|IPR014756|IPR015902|IPR017853	1,4-alpha-glucan-branching enzyme|Alpha-amylase, C-terminal all beta|Glycoside hydrolase, catalytic domain|Glycoside hydrolase, family 13|Glycoside hydrolase, family 13, N-terminal|Glycoside hydrolase, superfamily|Glycosyl hydrolase, family 13, all-beta|Glycosyl hydrolase, family 13, catalytic domain|Immunoglobulin E-set|Immunoglobulin-like fold	GO:0003824|GO:0003844|GO:0004553|GO:0005975|GO:0005978|GO:0043169	G3DSA:2.60.40.10|G3DSA:2.60.40.1180|G3DSA:3.20.20.80|MF_00685|PF00128|PF02806|PF02922|PIRSF000463|PTHR10357|PTHR10357:SF13|SSF51011|SSF51445|SSF81296|TIGR01515
glgC|glgC|AP_004361.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR005835|IPR005836|IPR011004|IPR011831|IPR023049	ADP-glucose pyrophosphorylase, conserved site|Glucose-1-phosphate adenylyltransferase|Glucose-1-phosphate adenylyltransferase GlgC, bacterial|Nucleotidyl transferase|Trimeric LpxA-like	GO:0005978|GO:0008878|GO:0009058|GO:0016740|GO:0016779	G3DSA:3.90.550.10|MF_00624|PF00483|PS00808|PS00809|PS00810|PTHR22572|PTHR22572:SF10|SSF51161|SSF53448|TIGR02091
glgP|glgP|AP_004363.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000811|IPR011833	Glycogen/starch/alpha-glucan phosphorylase|Glycosyl transferase, family 35	GO:0004645|GO:0005975|GO:0008184|GO:0030170	G3DSA:3.40.50.2000|PF00343|PIRSF000460|PS00102|PTHR11468|PTHR11468:SF0|SSF53756|TIGR02093
glgS|glgS|AP_003599.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR015065	Glycogen synthesis protein	GO:0005978	G3DSA:1.20.970.20|MF_00525|PD054490|PF08971|SSF109747
glgX|glgX|AP_004360.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004193|IPR006047|IPR011837|IPR013781|IPR013783|IPR014756|IPR015902|IPR017853|IPR022844	Glycogen debranching enzyme|Glycogen debranching enzyme, bacterial|Glycoside hydrolase, catalytic domain|Glycoside hydrolase, family 13|Glycoside hydrolase, family 13, N-terminal|Glycoside hydrolase, superfamily|Glycosyl hydrolase, family 13, catalytic domain|Immunoglobulin E-set|Immunoglobulin-like fold	GO:0003824|GO:0004133|GO:0004553|GO:0005975|GO:0005977|GO:0005980|GO:0043169	G3DSA:2.60.40.10|G3DSA:3.20.20.80|MF_01248|PF00128|PF02922|PTHR10357|PTHR10357:SF74|SSF51445|SSF81296|TIGR02100
glk|glk|AP_002988.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003836	Glucokinase	GO:0004340|GO:0005524|GO:0006096|GO:0051156	G3DSA:3.40.367.20|MF_00524|PF02685|PTHR30514|SSF53067|TIGR00749
glmM|glmM|AP_003719.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR005841|IPR005843|IPR005844|IPR005845|IPR005846|IPR006352|IPR016055|IPR016066	Alpha-D-phosphohexomutase superfamily|Alpha-D-phosphohexomutase, C-terminal|Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III|Alpha-D-phosphohexomutase, alpha/beta/alpha domain I|Alpha-D-phosphohexomutase, alpha/beta/alpha domain II|Alpha-D-phosphohexomutase, alpha/beta/alpha domain III|Alpha-D-phosphohexomutase, conserved site|Phosphoglucosamine mutase	GO:0000287|GO:0005975|GO:0008966|GO:0016868	G3DSA:3.30.310.50|G3DSA:3.40.120.10|MF_01554_B|PF00408|PF02878|PF02879|PF02880|PR00509|PS00710|PTHR22573|PTHR22573:SF15|SSF53738|SSF55957|TIGR01455
glmS|glmS|AP_004058.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000583|IPR001347|IPR005855|IPR017932	Class II glutamine amidotransferase domain|Glucosamine-fructose-6-phosphate aminotransferase, isomerising|Glutamine amidotransferase type 2 domain|Sugar isomerase (SIS)	GO:0004360|GO:0005737|GO:0005975|GO:0008152|GO:0016051|GO:0030246	G3DSA:3.40.50.10490|G3DSA:3.60.20.10|MF_00164|PF00310|PF01380|PS51278|PS51464|PTHR10937|PTHR10937:SF0|SSF53697|SSF56235|TIGR01135
glmU|glmU|AP_004057.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001451|IPR005882|IPR011004|IPR018357|IPR025877	Bacterial transferase hexapeptide repeat|Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase|Hexapeptide transferase, conserved site|MobA-like NTP transferase domain|Trimeric LpxA-like	GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0016740|GO:0019134	G3DSA:2.160.10.10|G3DSA:3.90.550.10|MF_01631|PF00132|PF12804|PS00101|PTHR22572|PTHR22572:SF17|SSF51161|SSF53448|TIGR01173
glnA|glnA|AP_003938.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001637|IPR004809|IPR008146|IPR008147|IPR014746|IPR027302|IPR027303	Glutamine synthetase class-I, adenylation site|Glutamine synthetase type I|Glutamine synthetase, N-terminal conserved site|Glutamine synthetase, beta-Grasp|Glutamine synthetase, catalytic domain|Glutamine synthetase, glycine-rich site|Glutamine synthetase/guanido kinase, catalytic domain	GO:0003824|GO:0004356|GO:0005737|GO:0006542|GO:0006807|GO:0009399	G3DSA:3.10.20.70|G3DSA:3.30.590.10|PF00120|PF03951|PS00180|PS00181|PS00182|PTHR20852|PTHR20852:SF15|SSF54368|SSF55931|TIGR00653
glnB|glnB|AP_003139.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002187|IPR002332|IPR011322|IPR015867|IPR017918	Nitrogen regulatory PII-like, alpha/beta|Nitrogen regulatory protein P-II, urydylation site|Nitrogen regulatory protein PII|Nitrogen regulatory protein PII, conserved site|Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal	GO:0006808|GO:0030234	G3DSA:3.30.70.120|PF00543|PR00340|PS00496|PS00638|PS51343|PTHR30115|SM00938|SSF54913
glnD|glnD|AP_000827.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002912|IPR002934|IPR003607|IPR006674|IPR010043|IPR013546	ACT domain|HD domain|HD/PDEase domain|Nucleotidyl transferase domain|PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase|Protein-PII uridylyltransferase	GO:0003824|GO:0006807|GO:0008081|GO:0008152|GO:0008773|GO:0016597|GO:0016779|GO:0046872	G3DSA:1.10.3210.10|G3DSA:3.30.460.10|G3DSA:3.30.70.260|MF_00277|PF01842|PF01909|PF01966|PF08335|PIRSF006288|PTHR13734|PTHR13734:SF1|SM00471|SSF109604|SSF55021|SSF81301|SSF81593|TIGR01693
glnE|glnE|AP_003603.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR005190|IPR013546	Glutamate-ammonia ligase adenylyltransferase, repeated domain|PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase	GO:0008882|GO:0016779	G3DSA:3.30.460.10|PF03710|PF08335|PTHR30621|SSF81301|SSF81593
glnG|glnG|AP_003940.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001789|IPR002078|IPR002197|IPR003593|IPR009057|IPR010114|IPR011006|IPR025662|IPR025943|IPR025944|IPR027417	AAA+ ATPase domain|CheY-like superfamily|DNA binding HTH domain,  Fis-type|Homeodomain-like|P-loop containing nucleoside triphosphate hydrolase|RNA polymerase sigma factor 54 interaction domain|Sigma-54 interaction domain, ATP-binding site 1|Sigma-54 interaction domain, ATP-binding site 2|Sigma-54 interaction domain, conserved site|Signal transduction response regulator, nitrogen regulation NR(I)|Signal transduction response regulator, receiver domain	GO:0000156|GO:0000160|GO:0000166|GO:0003677|GO:0003700|GO:0005524|GO:0006355|GO:0006808|GO:0008134|GO:0017111	G3DSA:1.10.10.60|G3DSA:1.10.8.60|G3DSA:3.40.50.2300|G3DSA:3.40.50.300|PF00072|PF00158|PF02954|PR01590|PS00675|PS00676|PS00688|PS50045|PS50110|PTHR32071|SM00382|SM00448|SSF46689|SSF52172|SSF52540|TIGR01818
glnH|glnH|AP_001442.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001638|IPR018313	Extracellular solute-binding protein, family 3|Extracellular solute-binding protein, family 3, conserved site	GO:0005215|GO:0006810|GO:0030288	G3DSA:3.40.190.10|PF00497|PS01039|PTHR18966|SM00062|SSF53850
glnK|glnK|AP_001100.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002187|IPR002332|IPR011322|IPR015867|IPR017918	Nitrogen regulatory PII-like, alpha/beta|Nitrogen regulatory protein P-II, urydylation site|Nitrogen regulatory protein PII|Nitrogen regulatory protein PII, conserved site|Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal	GO:0006808|GO:0030234	G3DSA:3.30.70.120|PF00543|PR00340|PS00496|PS00638|PS51343|PTHR30115|SM00938|SSF54913
glnL|glnL|AP_003939.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000014|IPR003594|IPR003661|IPR004358|IPR005467|IPR009082|IPR013767	Histidine kinase-like ATPase, ATP-binding domain|PAS domain|PAS fold|Signal transduction histidine kinase, core|Signal transduction histidine kinase, homodimeric domain|Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal	GO:0000155|GO:0004871|GO:0005524|GO:0006355|GO:0007165|GO:0016020|GO:0016310|GO:0016772	G3DSA:1.10.287.130|G3DSA:3.30.450.20|G3DSA:3.30.565.10|PF00512|PF00989|PF02518|PR00344|PS50109|PS50112|PTHR26402|PTHR26402:SF122|SM00091|SM00387|SM00388|SSF47384|SSF55785|SSF55874
glnP|glnP|AP_001441.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000515|IPR010065	Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family|Binding-protein-dependent transport systems inner membrane component	GO:0005215|GO:0006810|GO:0016020|GO:0016021	G3DSA:1.10.3720.10|PF00528|PS50928|PTHR30614|PTHR30614:SF0|SSF161098|TIGR01726
glnQ|glnQ|AP_001440.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003439|IPR003593|IPR017871|IPR027417	AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase	GO:0000166|GO:0005524|GO:0016887|GO:0017111	G3DSA:3.40.50.300|PF00005|PS00211|PS50893|PTHR24220|PTHR24220:SF179|SM00382|SSF52540
glnS|glnS|AP_001318.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000924|IPR001412|IPR004514|IPR011035|IPR014729|IPR020056|IPR020058|IPR020059|IPR020061|IPR022861	Aminoacyl-tRNA synthetase, class I, conserved site|Glutamine-tRNA ligase, bacterial|Glutamine-tRNA synthetase, class Ib|Glutamyl/glutaminyl-tRNA synthetase, class Ib|Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain|Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain|Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain|Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain|Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain|Rossmann-like alpha/beta/alpha sandwich fold	GO:0000166|GO:0004812|GO:0004819|GO:0005524|GO:0005737|GO:0006412|GO:0006418|GO:0006425|GO:0016876|GO:0043039	G3DSA:1.10.1160.10|G3DSA:2.40.240.10|G3DSA:3.40.50.620|G3DSA:3.90.800.10|MF_00126|PF00749|PF03950|PR00987|PS00178|PTHR10119|PTHR10119:SF15|SSF50715|SSF52374|TIGR00440
gloA|gloA|AP_002273.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004360|IPR004361|IPR018146	Glyoxalase I|Glyoxalase I, conserved site|Glyoxalase/fosfomycin resistance/dioxygenase domain	GO:0004462|GO:0046872	G3DSA:3.10.180.10|PF00903|PS00934|PS00935|PTHR10374|SSF54593|TIGR00068
gloB|gloB|AP_000867.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001279|IPR017782	Beta-lactamase-like|Hydroxyacylglutathione hydrolase	GO:0004416|GO:0006750|GO:0008270|GO:0016787	G3DSA:3.60.15.10|MF_01374|PF00753|PIRSF005457|PTHR11935|PTHR11935:SF7|SM00849|SSF56281|TIGR03413
glpA|glpA|AP_002838.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000447|IPR006076|IPR007419|IPR017752	BFD-like [2Fe-2S]-binding domain|FAD dependent oxidoreductase|FAD-dependent glycerol-3-phosphate dehydrogenase|Glycerol-3-phosphate dehydrogenase, GlpA subunit	GO:0004368|GO:0005886|GO:0006072|GO:0009331|GO:0010181|GO:0016491|GO:0046174|GO:0050660|GO:0055114	G3DSA:3.50.50.60|PF01266|PF04324|PR01001|PS00977|PS00978|PTHR11985|PTHR11985:SF0|SSF51905|TIGR03377
glpB|glpB|AP_002839.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003953|IPR009158	FAD binding domain|Glycerol-3-phosphate dehydrogenase, GlpB subunit	GO:0004368|GO:0055114	G3DSA:3.50.50.60|MF_00753|PF00890|PIRSF000141|PTHR11632|PTHR11632:SF9|SSF51905|TIGR03378
glpC|glpC|AP_002840.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004017|IPR009051|IPR012285|IPR017753|IPR017896|IPR017900	4Fe-4S ferredoxin, iron-sulphur binding, conserved site|4Fe-4S ferredoxin-type, iron-sulpur binding domain|Alpha-helical ferredoxin|Cysteine-rich domain|Fumarate reductase, C-terminal|Glycerol-3-phosphate dehydrogenase, GlpC subunit	GO:0006810|GO:0016020|GO:0016491|GO:0051536|GO:0055114	G3DSA:1.10.1060.10|PF02754|PF13183|PS00198|PS51379|PTHR32479|PTHR32479:SF2|SSF46548|TIGR03379
glpD|glpD|AP_004365.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000447|IPR006076	FAD dependent oxidoreductase|FAD-dependent glycerol-3-phosphate dehydrogenase	GO:0004368|GO:0006072|GO:0009331|GO:0016491|GO:0055114	G3DSA:3.50.50.60|PF01266|PR01001|PS00977|PS00978|PTHR11985|PTHR11985:SF0|SSF51905|SSF54373
glpE|glpE|AP_004366.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001763|IPR023695	Rhodanese-like domain|Thiosulfate sulfurtransferase, bacterial	GO:0004792|GO:0005737	G3DSA:3.40.250.10|MF_01009|PF00581|PS50206|PTHR13253|PTHR13253:SF10|SM00450|SSF52821
glpF|glpF|AP_003882.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000425|IPR022357|IPR023271	Aquaporin-like|Major intrinsic protein|Major intrinsic protein, conserved site	GO:0005215|GO:0006810|GO:0016020	G3DSA:1.20.1080.10|PF00230|PR00783|PS00221|PTHR19139|PTHR19139:SF71|SSF81338|TIGR00861
glpG|glpG|AP_004367.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002610|IPR022732|IPR022764|IPR023662	Peptidase S54, GlpG peptidase, N-terminal|Peptidase S54, rhomboid|Peptidase S54, rhomboid domain|Rhomboid protease GlpG	GO:0004252|GO:0006508|GO:0016021	G3DSA:1.20.1540.10|MF_01594|PF01694|PF12122|PTHR22936|PTHR22936:SF0|SSF144091|TIGR04239
glpK|glpK|AP_003883.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR005999|IPR018483|IPR018484|IPR018485	Carbohydrate kinase, FGGY, C-terminal|Carbohydrate kinase, FGGY, N-terminal|Carbohydrate kinase, FGGY, conserved site|Glycerol kinase	GO:0004370|GO:0005975|GO:0006072|GO:0016773	G3DSA:3.30.420.40|MF_00186|PF00370|PF02782|PS00445|PS00933|PTHR10196|PTHR10196:SF9|SSF53067|TIGR01311
glpQ|glpQ|AP_002836.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004129|IPR017946	Glycerophosphoryl diester phosphodiesterase|PLC-like phosphodiesterase, TIM beta/alpha-barrel domain	GO:0006071|GO:0006629|GO:0008081|GO:0008889	G3DSA:3.20.20.190|PF03009|PTHR23344|SSF51695
glpR|glpR|AP_004368.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001034|IPR011991|IPR014036	DeoR C-terminal sensor domain|HTH DeoR N-terminal domain|Winged helix-turn-helix DNA-binding domain	GO:0003700|GO:0005622|GO:0006355	G3DSA:1.10.10.10|G3DSA:3.30.750.70|PF00455|PF08220|PR00037|PTHR30595|PTHR30595:SF0|SM00420|SSF100950|SSF46785
glpT|glpT|AP_002837.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000849|IPR005267|IPR011701|IPR016196|IPR020846|IPR021159	Glycerate/sugar phosphate transporter, conserved site|Glycerol-3-phosphate transporter|Major facilitator superfamily|Major facilitator superfamily domain|Major facilitator superfamily domain, general substrate transporter|Sugar phosphate transporter	GO:0005215|GO:0006810|GO:0015169|GO:0015794|GO:0016021|GO:0055085	G3DSA:1.20.1250.20|PF07690|PIRSF002808|PS00942|PS50850|PTHR11662|PTHR11662:SF13|SSF103473|TIGR00712|TIGR00881
glpX|glpX|AP_003884.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004464	Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase	GO:0006071|GO:0006094|GO:0042132	G3DSA:3.30.540.10|PF03320|PIRSF004532|PTHR30447|PTHR30447:SF0|SSF56655|TIGR00330
gltA|gltA|AP_001358.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002020|IPR010953|IPR016141|IPR016142|IPR016143|IPR019810|IPR024176	Citrate synthase active site|Citrate synthase, bacterial-type|Citrate synthase, type II|Citrate synthase-like|Citrate synthase-like, core|Citrate synthase-like, large alpha subdomain|Citrate synthase-like, small alpha subdomain	GO:0004108|GO:0005737|GO:0006099|GO:0044262|GO:0046912	G3DSA:1.10.230.10|G3DSA:1.10.580.10|PF00285|PIRSF001369|PR00143|PS00480|PTHR11739|PTHR11739:SF0|SSF48256|TIGR01798
gltB|gltB|AP_003755.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000583|IPR002489|IPR002932|IPR006982|IPR013785|IPR017932	Aldolase-type TIM barrel|Class II glutamine amidotransferase domain|Glutamate synthase, alpha subunit, C-terminal|Glutamate synthase, central-C|Glutamate synthase, central-N|Glutamine amidotransferase type 2 domain	GO:0003824|GO:0006537|GO:0006807|GO:0008152|GO:0015930|GO:0016491|GO:0016638|GO:0055114	G3DSA:2.160.20.60|G3DSA:3.20.20.70|G3DSA:3.60.20.10|PF00310|PF01493|PF01645|PF04898|PS51278|PTHR11938|PTHR11938:SF1|SSF51395|SSF56235|SSF69336
gltD|gltD|AP_003756.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001327|IPR006006|IPR009051|IPR012285|IPR016040|IPR017896	4Fe-4S ferredoxin-type, iron-sulpur binding domain|Alpha-helical ferredoxin|Fumarate reductase, C-terminal|Glutamate synthase, NADH/NADPH, small subunit 2|NAD(P)-binding domain|Pyridine nucleotide-disulphide oxidoreductase, NAD-binding domain	GO:0006537|GO:0016491|GO:0016639|GO:0050660|GO:0051536|GO:0055114	G3DSA:1.10.1060.10|G3DSA:3.40.50.720|G3DSA:3.50.50.60|PF00070|PF13450|PR00419|PS51379|PTHR11938|PTHR11938:SF9|SSF46548|SSF51971|TIGR01318
gltF|gltF|AP_003757.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR010546	Protein of unknown function DUF1120		PF06551
gltI|gltI|AP_001304.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001638	Extracellular solute-binding protein, family 3	GO:0005215|GO:0006810|GO:0030288	G3DSA:3.40.190.10|PF00497|PTHR30085|SM00062|SSF53850
gltJ|gltJ|AP_001303.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000515|IPR010065	Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family|Binding-protein-dependent transport systems inner membrane component	GO:0005215|GO:0006810|GO:0016020|GO:0016021	G3DSA:1.10.3720.10|PF00528|PS50928|PTHR30085|SSF161098|TIGR01726
gltK|gltK|AP_001302.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000515|IPR010065	Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family|Binding-protein-dependent transport systems inner membrane component	GO:0005215|GO:0006810|GO:0016020|GO:0016021	G3DSA:1.10.3720.10|PF00528|PS50928|PTHR30424|SSF161098|TIGR01726
gltL|gltL|AP_001301.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003439|IPR003593|IPR017871|IPR027417	AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase	GO:0000166|GO:0005524|GO:0016887|GO:0017111	G3DSA:3.40.50.300|PF00005|PS00211|PS50893|PTHR24220|PTHR24220:SF179|SM00382|SSF52540
gltP|gltP|AP_004578.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001991|IPR018107	Sodium:dicarboxylate symporter|Sodium:dicarboxylate symporter, conserved site	GO:0006835|GO:0016020|GO:0017153	G3DSA:1.10.3860.10|PF00375|PR00173|PS00713|PS00714|PTHR11958|PTHR11958:SF26|SSF118215
gltS|gltS|AP_004139.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004445	Sodium/glutamate symporter	GO:0015501|GO:0015813|GO:0016021	PF03616|TIGR00210
gltX|gltX|AP_002997.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000924|IPR001412|IPR004527|IPR008925|IPR014729|IPR020058|IPR020061|IPR020751	Aminoacyl-tRNA synthetase, class I, anticodon-binding|Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2|Aminoacyl-tRNA synthetase, class I, conserved site|Glutamate-tRNA ligase, class Ib, bacterial/mitochondrial|Glutamyl/glutaminyl-tRNA synthetase, class Ib|Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain|Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain|Rossmann-like alpha/beta/alpha sandwich fold	GO:0000049|GO:0000166|GO:0004812|GO:0004818|GO:0005524|GO:0005737|GO:0006418|GO:0006424|GO:0016876|GO:0043039	G3DSA:1.10.10.350|G3DSA:1.10.1160.10|G3DSA:3.40.50.620|G3DSA:3.90.800.10|MF_00022_B|PF00749|PR00987|PS00178|PTHR10119|PTHR10119:SF1|SSF48163|SSF52374|TIGR00464
glvB|glvB|AP_004111.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001996|IPR011535|IPR018113	Phosphotransferase system EIIB/cysteine, phosphorylation site|Phosphotransferase system, EIIB component, type 1|Phosphotransferase system, glucose-like IIB component	GO:0005351|GO:0006810|GO:0008982|GO:0009401|GO:0016020	G3DSA:3.30.1360.60|PF00367|PS01035|PS51098|PTHR30009|PTHR30009:SF1|SSF55604|TIGR00826
glvC|glvC|AP_004110.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003352|IPR004719|IPR010975|IPR013013	Phosphotransferase system, EIIC|Phosphotransferase system, EIIC component, type 1|Phosphotransferase system, alpha-glucoside-specific IIBC component|Phosphotransferase system, maltose/glucose-specific IIC component	GO:0005351|GO:0008982|GO:0009401|GO:0016020|GO:0016021	PF02378|PS51103|PTHR30009|PTHR30009:SF1|TIGR00852|TIGR02005
glxK|glxK|AP_001162.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004381|IPR018193	Glycerate kinase|Glycerate kinase, flavodoxin-like domain	GO:0008887|GO:0031388	G3DSA:3.90.1510.10|PF02595|PIRSF006078|PTHR21599|SSF110738|TIGR00045
glxR|glxR|AP_001157.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002204|IPR006115|IPR006398|IPR008927|IPR013328|IPR015815|IPR016040	2-hydroxy-3-oxopropionate reductase|3-hydroxyisobutyrate dehydrogenase-related, conserved site|6-phosphogluconate dehydrogenase, C-terminal-like|6-phosphogluconate dehydrogenase, NADP-binding|Dehydrogenase, multihelical|Hydroxy monocarboxylic acid anion dehydrogenase, HIBADH-type|NAD(P)-binding domain	GO:0004616|GO:0006098|GO:0006573|GO:0008442|GO:0008679|GO:0016491|GO:0016616|GO:0046487|GO:0050662|GO:0055114	G3DSA:1.10.1040.10|G3DSA:3.40.50.720|PF03446|PIRSF000103|PS00895|PTHR22981|PTHR22981:SF29|SSF48179|SSF51735|TIGR01505
glyA|glyA|AP_003137.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001085|IPR015421|IPR015422|IPR015424|IPR019798	Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2|Serine hydroxymethyltransferase|Serine hydroxymethyltransferase, pyridoxal phosphate binding site	GO:0003824|GO:0004372|GO:0006544|GO:0006563|GO:0030170	G3DSA:3.40.640.10|G3DSA:3.90.1150.10|MF_00051|PF00464|PIRSF000412|PS00096|PTHR11680|PTHR11680:SF0|SSF53383
glyQ|glyQ|AP_004233.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002310|IPR006194	Glycine-tRNA ligase, alpha subunit|Glycine-tRNA synthetase, heterodimeric	GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426	G3DSA:1.20.58.180|G3DSA:3.30.930.10|MF_00254|PF02091|PR01044|PS50861|PTHR30075|SSF55681|TIGR00388
glyS|glyS|AP_004234.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR006194|IPR008909|IPR015944	DALR anticodon binding|Glycine-tRNA ligase, beta subunit|Glycine-tRNA synthetase, heterodimeric	GO:0000166|GO:0004814|GO:0004820|GO:0005524|GO:0005737|GO:0006420|GO:0006426	MF_00255|PF02092|PF05746|PR01045|PS50861|PTHR30075|PTHR30075:SF2|SM00836|SSF109604|TIGR00211
gmd|gmd|AP_002653.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001509|IPR006368|IPR016040	GDP-mannose 4,6-dehydratase|NAD(P)-binding domain|NAD-dependent epimerase/dehydratase	GO:0003824|GO:0005622|GO:0008446|GO:0019673|GO:0044237|GO:0050662	G3DSA:3.40.50.720|G3DSA:3.90.25.10|PF01370|PTHR10366|PTHR10366:SF149|SSF51735|TIGR01472
gmhB|gmhB|AP_000861.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004446|IPR006543|IPR006549|IPR023214	D,D-heptose 1,7-bisphosphate phosphatase|HAD-like domain|HAD-superfamily hydrolase, subfamily IIIA|Histidinol-phosphate phosphatase	GO:0005975|GO:0016791	G3DSA:3.40.50.1000|PF13242|PIRSF004682|PTHR23133|PTHR23133:SF3|SSF56784|TIGR00213|TIGR01656|TIGR01662
gmk|gmk|AP_004144.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR008144|IPR008145|IPR017665|IPR027417	Guanylate kinase|Guanylate kinase, sub-group|Guanylate kinase/L-type calcium channel|P-loop containing nucleoside triphosphate hydrolase	GO:0004385|GO:0005515|GO:0006163	G3DSA:3.30.63.10|G3DSA:3.40.50.300|PF00625|PTHR23117|SM00072|SSF52540|TIGR03263
gmr|gmr|AP_001911.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000014|IPR000160|IPR001054|IPR001633	Adenylyl cyclase class-3/4/guanylyl cyclase|Diguanylate phosphodiesterase, EAL domain|GGDEF domain|PAS domain	GO:0004871|GO:0007165|GO:0009190|GO:0016849|GO:0035556	G3DSA:3.20.20.450|G3DSA:3.30.450.20|G3DSA:3.30.70.270|PF00563|PF00990|PF13426|PS50112|PS50883|PS50887|PTHR30394|PTHR30394:SF0|SM00052|SM00091|SM00267|SSF141868|SSF55073|SSF55785|TIGR00229|TIGR00254
gnd|gnd|AP_002630.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR006113|IPR006114|IPR006115|IPR006184|IPR008927|IPR012284|IPR013328|IPR016040	6-phosphogluconate dehydrogenase, C-terminal|6-phosphogluconate dehydrogenase, C-terminal-like|6-phosphogluconate dehydrogenase, NADP-binding|6-phosphogluconate dehydrogenase, decarboxylating|6-phosphogluconate-binding site|Dehydrogenase, multihelical|Fibritin/6-phosphogluconate dehydrogenase, C-terminal extension|NAD(P)-binding domain	GO:0004616|GO:0006098|GO:0016491|GO:0016616|GO:0050661|GO:0050662|GO:0055114	G3DSA:1.10.1040.10|G3DSA:1.20.5.320|G3DSA:3.40.50.720|PF00393|PF03446|PIRSF000109|PR00076|PS00461|PTHR11811|SSF48179|SSF51735|TIGR00873
gnsA|gnsA|AP_001622.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR012563	Gns		PF08178
gnsB|gnsB|AP_002172.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR012563	Gns		PF08178
gntK|gntK|AP_004355.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000623|IPR006001|IPR027417	Carbohydrate kinase, thermoresistant glucokinase|P-loop containing nucleoside triphosphate hydrolase|Shikimate kinase/Threonine synthase-like 1	GO:0005975|GO:0016301	G3DSA:3.40.50.300|PF01202|PTHR11603|PTHR11603:SF49|SSF52540|TIGR01313
gntP|gntP|AP_004813.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003474	Gluconate transporter	GO:0015128|GO:0016020|GO:0035429	PF02447|PIRSF002746|PTHR30354|TIGR00791
gntR|gntR|AP_004354.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000843|IPR001761|IPR010982	Lambda repressor-like, DNA-binding domain|Periplasmic binding protein/LacI sugar binding domain|Transcription regulator HTH, LacI	GO:0003677|GO:0003700|GO:0005622|GO:0006355	G3DSA:1.10.260.40|G3DSA:3.40.50.2300|PF00356|PF00532|PS00356|PS50932|PTHR30146|PTHR30146:SF2|SM00354|SSF47413|SSF53822
gntT|gntT|AP_004375.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003474	Gluconate transporter	GO:0015128|GO:0016020|GO:0035429	PF02447|PIRSF002746|PTHR30354|TIGR00791
gntU|gntU|AP_004356.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003474	Gluconate transporter	GO:0015128|GO:0016020|GO:0035429	PF02447|PIRSF002746|PTHR30354|TIGR00791
gntX|gntX|AP_004377.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000836|IPR005222	Competence protein ComF|Phosphoribosyltransferase domain	GO:0009116	G3DSA:3.40.50.2020|PF00156|PTHR10210|SSF53271|TIGR00201
gntY|gntY|AP_004376.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000361|IPR001075|IPR017726	Fe/S biogenesis protein, NfuA|FeS cluster biogenesis|NIF system FeS cluster assembly, NifU, C-terminal	GO:0005506|GO:0016226|GO:0051536|GO:0051539|GO:0051604	G3DSA:2.60.300.12|MF_01637|PD002830|PF01106|PF01521|PTHR10072|PTHR10072:SF35|SSF117916|SSF89360|TIGR03341
gor|gor|AP_004293.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001327|IPR004099|IPR006322|IPR012999|IPR013027|IPR016156|IPR023753	FAD-dependent pyridine nucleotide-disulphide oxidoreductase|FAD/NAD-linked reductase, dimerisation|Glutathione reductase, eukaryote/bacterial|Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain|Pyridine nucleotide-disulphide oxidoreductase, NAD-binding domain|Pyridine nucleotide-disulphide oxidoreductase, class I, active site|Pyridine nucleotide-disulphide oxidoreductase, dimerisation	GO:0004362|GO:0005737|GO:0006749|GO:0016491|GO:0016668|GO:0045454|GO:0050660|GO:0050661|GO:0055114	G3DSA:3.30.390.30|G3DSA:3.50.50.60|PF00070|PF02852|PF07992|PR00368|PR00411|PS00076|PTHR22912|PTHR22912:SF53|SSF51905|SSF55424|TIGR01421
gph|gph|AP_004405.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR005833|IPR006346|IPR006402|IPR006439|IPR023198|IPR023214	2-phosphoglycolate phosphatase, prokaryotic|HAD-like domain|HAD-superfamily hydrolase, subfamily IA, variant 1|HAD-superfamily hydrolase, subfamily IA, variant 3|Haloacid dehalogenase/epoxide hydrolase|Phosphoglycolate phosphatase, domain 2	GO:0008152|GO:0008967|GO:0016787|GO:0046295	G3DSA:1.10.150.240|G3DSA:3.40.50.1000|MF_00495|PF00702|PR00413|PTHR18901|SSF56784|TIGR01449|TIGR01509|TIGR01549
gpmA|gpmA|AP_001386.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001345|IPR005952|IPR013078	Histidine phosphatase superfamily, clade-1|Phosphoglycerate mutase 1|Phosphoglycerate/bisphosphoglycerate mutase, active site	GO:0003824|GO:0004619|GO:0006096|GO:0008152|GO:0016868	G3DSA:3.40.50.1240|MF_01039|PF00300|PS00175|PTHR11931|PTHR11931:SF0|SM00855|SSF53254|TIGR01258
gpmI|gpmI|AP_004179.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR005995|IPR006124|IPR011258|IPR017849|IPR017850	Alkaline phosphatase-like, alpha/beta/alpha|Alkaline-phosphatase-like, core domain|BPG-independent PGAM, N-terminal|Metalloenzyme|Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent	GO:0003824|GO:0004619|GO:0005737|GO:0006007|GO:0008152|GO:0030145|GO:0046872	G3DSA:3.40.1450.10|G3DSA:3.40.720.10|MF_01038|PF01676|PF06415|PIRSF001492|PTHR31637|SSF53649|SSF64158|TIGR01307
gpp|gpp|AP_004018.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003695|IPR023709	Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase|Ppx/GppA phosphatase	GO:0008894|GO:0015974	G3DSA:3.30.420.150|G3DSA:3.30.420.40|MF_01550|PF02541|PTHR30005|SSF109604|SSF53067
gpsA|gpsA|AP_004183.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR006109|IPR006168|IPR008927|IPR011128|IPR013328|IPR016040	6-phosphogluconate dehydrogenase, C-terminal-like|Dehydrogenase, multihelical|Glycerol-3-phosphate dehydrogenase, NAD-dependent|Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal|Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal|NAD(P)-binding domain	GO:0004367|GO:0005737|GO:0005975|GO:0006072|GO:0009331|GO:0016491|GO:0016614|GO:0016616|GO:0046168|GO:0050662|GO:0051287|GO:0055114	G3DSA:1.10.1040.10|G3DSA:3.40.50.720|MF_00394|PF01210|PF07479|PIRSF000114|PR00077|PS00957|PTHR11728|SSF48179|SSF51735
gpt|gpt|AP_000891.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000836|IPR023747	Phosphoribosyltransferase domain|Xanthine-guanine phosphoribosyltransferase	GO:0000310|GO:0009116	G3DSA:3.40.50.2020|MF_01903|PF00156|SSF53271
greA|greA|AP_003724.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001437|IPR006359|IPR018151|IPR022691|IPR023459	Transcription elongation factor GreA|Transcription elongation factor GreA/GreB|Transcription elongation factor, GreA/GreB, C-terminal|Transcription elongation factor, GreA/GreB, N-terminal|Transcription elongation factor, GreA/GreB, conserved site	GO:0003677|GO:0032784	G3DSA:1.10.287.180|G3DSA:3.10.50.30|MF_00105|PF01272|PF03449|PIRSF006092|PS00829|PS00830|PTHR30437|PTHR30437:SF0|SSF46557|SSF54534|TIGR01462
greB|greB|AP_004384.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001437|IPR006358|IPR018151|IPR022691|IPR023459	Transcription elongation factor GreA/GreB|Transcription elongation factor GreB|Transcription elongation factor, GreA/GreB, C-terminal|Transcription elongation factor, GreA/GreB, N-terminal|Transcription elongation factor, GreA/GreB, conserved site	GO:0003677|GO:0032784	G3DSA:1.10.287.180|G3DSA:3.10.50.30|MF_00105|PF01272|PF03449|PIRSF006092|PS00829|PS00830|PTHR30091|SSF46557|SSF54534|TIGR01461
groL|groL|AP_004644.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001844|IPR002423|IPR018370|IPR027409|IPR027413	Chaperonin Cpn60|Chaperonin Cpn60, conserved site|Chaperonin Cpn60/TCP-1|GroEL-like apical domain|GroEL-like equatorial domain	GO:0005524|GO:0005737|GO:0006457|GO:0042026|GO:0044267	G3DSA:1.10.560.10|G3DSA:3.50.7.10|MF_00600|PF00118|PR00298|PS00296|PTHR11353|PTHR11353:SF10|SSF48592|SSF52029|SSF54849|TIGR02348
groS|groS|AP_004643.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR011032|IPR018369|IPR020818	Chaperonin Cpn10|Chaperonin Cpn10, conserved site|GroES-like	GO:0005524|GO:0005737|GO:0006457	G3DSA:2.30.33.40|MF_00580|PF00166|PR00297|PS00681|PTHR10772|SM00883|SSF50129
grpE|grpE|AP_003194.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000740|IPR009012|IPR013805	GrpE nucleotide exchange factor|GrpE nucleotide exchange factor, coiled-coil|GrpE nucleotide exchange factor, head	GO:0000774|GO:0006457|GO:0042803|GO:0051087	G3DSA:2.30.22.10|G3DSA:3.90.20.20|MF_01151|PF01025|PR00773|PS01071|PTHR21237|PTHR21237:SF2|SSF51064|SSF58014
grxA|grxA|AP_001480.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002109|IPR011767|IPR011902|IPR012336|IPR014025	Glutaredoxin|Glutaredoxin active site|Glutaredoxin subgroup|Glutaredoxin, GrxA|Thioredoxin-like fold	GO:0009055|GO:0015035|GO:0045454	G3DSA:3.40.30.10|PF00462|PR00160|PS00195|PS51354|PTHR10168|SSF52833|TIGR02183
grxB|grxB|AP_001690.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004045|IPR007494|IPR010987|IPR011767|IPR011901|IPR012336	Glutaredoxin 2, C-terminal|Glutaredoxin active site|Glutaredoxin, GrxB|Glutathione S-transferase, C-terminal-like|Glutathione S-transferase, N-terminal|Thioredoxin-like fold	GO:0005515|GO:0009055|GO:0015035|GO:0045454	G3DSA:1.20.1050.10|G3DSA:3.40.30.10|PF04399|PF13417|PS00195|PS50404|PTHR11260|PTHR11260:SF24|SSF47616|SSF52833|TIGR02182
grxC|grxC|AP_004181.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002109|IPR011767|IPR011900|IPR012336|IPR014025	Glutaredoxin|Glutaredoxin active site|Glutaredoxin subgroup|Glutaredoxin, GrxC|Thioredoxin-like fold	GO:0009055|GO:0015035|GO:0045454	G3DSA:3.40.30.10|PF00462|PR00160|PS00195|PS51354|PTHR10168|SSF52833|TIGR02181
gshA|gshA|AP_003260.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR006334|IPR007370	Glutamate--cysteine ligase|Glutamate--cysteine ligase, monofunctional	GO:0004357|GO:0006750	MF_00578|PF04262|PTHR30297|PTHR30297:SF0|SSF55931|TIGR01434
gshB|gshB|AP_003504.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004215|IPR004218|IPR006284|IPR011761|IPR013815|IPR013816|IPR016185	ATP-grasp fold|ATP-grasp fold, subdomain 1|ATP-grasp fold, subdomain 2|Glutathione synthetase, prokaryotic|Pre-ATP-grasp domain|Prokaryotic glutathione synthetase, ATP-binding|Prokaryotic glutathione synthetase, N-terminal	GO:0003824|GO:0004363|GO:0005524|GO:0005829|GO:0006750|GO:0046872	G3DSA:3.30.1490.20|G3DSA:3.30.470.20|G3DSA:3.40.50.20|MF_00162|PF02951|PF02955|PS50975|PTHR21621|PTHR21621:SF0|SSF52440|SSF56059|TIGR01380
gsk|gsk|AP_001126.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002173|IPR011611	Carbohydrate kinase PfkB|Carbohydrate/puine kinase, PfkB, conserved site	GO:0016773	G3DSA:3.30.1110.10|G3DSA:3.40.1190.20|PF00294|PS00584|PTHR10584|PTHR10584:SF128|SSF53613
gspA|gspA|AP_004467.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002477|IPR027417	P-loop containing nucleoside triphosphate hydrolase|Peptidoglycan binding-like		G3DSA:1.10.101.10|G3DSA:3.40.50.300|PF01471|PF13401|SSF47090|SSF52540
gspC|gspC|AP_004466.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001478|IPR001639	PDZ domain|Type II secretion system protein C	GO:0005515|GO:0008565|GO:0015627|GO:0015628	G3DSA:2.30.42.10|PF11356|PS01141|SSF50156|TIGR01713
gspD|gspD|AP_004465.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001775|IPR004845|IPR004846|IPR005644|IPR013356	GspD/PilQ family|NolW-like|Type II secretion system GspD|Type II secretion system GspD, conserved site|Type II/III secretion system	GO:0008565|GO:0009306|GO:0015627|GO:0015628|GO:0019867	PF00263|PF03958|PR00811|PS00875|PTHR30332|TIGR02517
gspE|gspE|AP_004464.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001482|IPR003593|IPR013369|IPR027417	AAA+ ATPase domain|P-loop containing nucleoside triphosphate hydrolase|Type II secretion system GspE|Type II secretion system protein E	GO:0000166|GO:0005524|GO:0005622|GO:0006810|GO:0008565|GO:0015627|GO:0015628|GO:0017111	G3DSA:3.30.450.90|G3DSA:3.40.50.300|PF00437|PS00662|PTHR30258|PTHR30258:SF2|SM00382|SSF52540|TIGR02533
gspF|gspF|AP_004463.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001992|IPR003004|IPR011850|IPR018076	General secretion pathway protein F|GspF/PilC family|Type II secretion system F domain|Type II secretion system conserved site	GO:0008565|GO:0009306|GO:0015627|GO:0015628|GO:0016020	PF00482|PR00812|PS00874|PTHR30012|TIGR02120
gspG|gspG|AP_004462.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000983|IPR010054|IPR012902|IPR013545	Bacterial general secretion pathway protein G|General secretion pathway protein G|Prokaryotic N-terminal methylation site|Type II secretion system protein G	GO:0008565|GO:0015627|GO:0015628	G3DSA:3.30.700.10|PF08334|PF13544|PR00813|PS00409|PTHR30093|SSF54523|TIGR01710|TIGR02532
gspH|gspH|AP_004461.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002416|IPR012902|IPR022346	General secretion pathway, GspH|Prokaryotic N-terminal methylation site|Type II secretion system protein H	GO:0008565|GO:0015627|GO:0015628	G3DSA:3.55.40.10|PF12019|PF13544|PR00885|PS00409|SSF54523|TIGR01708|TIGR02532
gspI|gspI|AP_004460.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003413|IPR010052|IPR012902	Prokaryotic N-terminal methylation site|Type II secretion system protein I|Type II secretion system protein I domain	GO:0008565|GO:0015627|GO:0015628	G3DSA:3.30.1300.30|PF02501|PS00409|SSF54523|TIGR01707|TIGR02532
gspJ|gspJ|AP_004459.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR010055|IPR012902	Prokaryotic N-terminal methylation site|Type II secretion system protein J	GO:0008565|GO:0015627|GO:0015628	G3DSA:3.10.610.10|PF11612|PF13544|PS00409|SSF54523|TIGR02532
gspK|gspK|AP_004458.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR005628	General secretion pathway protein K	GO:0009306|GO:0016021	G3DSA:1.10.40.60|G3DSA:3.30.1300.30|PF03934|PIRSF002786|SSF158544|SSF54523
gspL|gspL|AP_004457.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR007812|IPR024230|IPR025691	GspL periplasmic domain|GspL, cytoplasmic actin-ATPase-like domain|Type II secretion system protein L	GO:0008565|GO:0009276|GO:0015031|GO:0016021	PF05134|PF12693|PIRSF015761|SSF53067|TIGR01709
gspM|gspM|AP_004456.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR007690|IPR023229	Type II secretion system protein M, periplasmic domain|Type II secretion system, protein M	GO:0006858	PF04612|SSF103054
gspO|gspO|AP_004455.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000045|IPR014032	Peptidase A24A, prepilin type IV, bacterial|Prepilin type IV endopeptidase, peptidase domain	GO:0004190|GO:0016020	PF01478|PR00864|PTHR30487
gss|gss|AP_003543.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR005494|IPR007921|IPR016185	Cysteine, histidine-dependent amidohydrolase/peptidase|Glutathionylspermidine synthase, pre-ATP-grasp-like domain|Pre-ATP-grasp domain		PF03738|PF05257|PS50911|PTHR30094|PTHR30094:SF0|SSF52440|SSF54001|SSF56059
gst|gst|AP_002257.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004045|IPR004046|IPR010987|IPR012336|IPR017933	Glutathione S-transferase, C-terminal|Glutathione S-transferase, C-terminal-like|Glutathione S-transferase, N-terminal|Glutathione S-transferase/chloride channel, C-terminal|Thioredoxin-like fold	GO:0005515	G3DSA:1.20.1050.10|G3DSA:3.40.30.10|PF00043|PF13409|PS50404|PS50405|PTHR11260|PTHR11260:SF58|SSF47616|SSF52833
guaA|guaA|AP_003093.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001674|IPR004739|IPR014729|IPR017926|IPR022310|IPR022955|IPR025777	GMP synthase|GMP synthase, C-terminal|GMP synthase, N-terminal|GMP synthetase ATP pyrophosphatase domain|Glutamine amidotransferase|NAD/GMP synthase|Rossmann-like alpha/beta/alpha sandwich fold	GO:0003922|GO:0005524|GO:0006164|GO:0006177|GO:0016462	G3DSA:3.30.300.10|G3DSA:3.40.50.620|G3DSA:3.40.50.880|MF_00344|PF00117|PF00958|PF02540|PR00096|PR00097|PR00099|PS51273|PS51553|PTHR11922|PTHR11922:SF2|SSF52317|SSF52402|SSF54810|TIGR00884|TIGR00888
guaB|guaB|AP_003094.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000644|IPR001093|IPR005990|IPR013785|IPR015875	Aldolase-type TIM barrel|Cystathionine beta-synthase, core|IMP dehydrogenase / GMP reductase, conserved site|IMP dehydrogenase/GMP reductase|Inosine-5'-monophosphate dehydrogenase	GO:0003824|GO:0003938|GO:0005515|GO:0006164|GO:0016491|GO:0055114	G3DSA:3.20.20.70|MF_01964|PF00478|PF00571|PIRSF000130|PS00487|PS51371|PTHR11911|PTHR11911:SF6|SM00116|SSF51412|SSF54631|TIGR01302
guaC|guaC|AP_000766.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001093|IPR005993|IPR013785|IPR015875	Aldolase-type TIM barrel|Guanosine monophosphate reductase 1|IMP dehydrogenase / GMP reductase, conserved site|IMP dehydrogenase/GMP reductase	GO:0003824|GO:0003920|GO:0009117|GO:0016491|GO:0055114	G3DSA:3.20.20.70|MF_00596|PF00478|PIRSF000235|PS00487|PTHR11911|PTHR11911:SF7|SSF51412|TIGR01305
guaD|guaD|AP_003443.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR006680|IPR011059|IPR014311	Amidohydrolase 1|Guanine deaminase|Metal-dependent hydrolase, composite domain	GO:0006147|GO:0008270|GO:0008892|GO:0016787|GO:0016810	G3DSA:2.30.40.10|G3DSA:3.20.20.140|PF01979|PTHR11271|PTHR11271:SF6|SSF51338|SSF51556|TIGR02967
gudD|gudD|AP_003353.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001354|IPR013342|IPR017653	Glucarate dehydratase|Mandelate racemase/muconate lactonizing enzyme|Mandelate racemase/muconate lactonizing enzyme, C-terminal	GO:0000287|GO:0003824|GO:0008152|GO:0008872|GO:0019394	G3DSA:3.20.20.120|G3DSA:3.30.390.10|PF01188|PF13378|PTHR13794|PTHR13794:SF6|SM00922|SSF51604|SSF54826|TIGR03247
gudP|gudP|AP_003355.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004744|IPR011701|IPR016196|IPR020846	D-galactonate transporter|Major facilitator superfamily|Major facilitator superfamily domain|Major facilitator superfamily domain, general substrate transporter	GO:0005215|GO:0006810|GO:0016021|GO:0055085	G3DSA:1.20.1250.20|PF07690|PS50850|PTHR11662|PTHR11662:SF18|SSF103473|TIGR00893
gudX|gudX|AP_003354.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001354|IPR013341|IPR013342	Mandelate racemase/muconate lactonizing enzyme|Mandelate racemase/muconate lactonizing enzyme, C-terminal|Mandelate racemase/muconate lactonizing enzyme, N-terminal	GO:0003824|GO:0008152	G3DSA:3.20.20.120|G3DSA:3.30.390.10|PF01188|PF02746|PF13378|PTHR13794|PTHR13794:SF6|SM00922|SSF51604|SSF54826
gutM|gutM|AP_003273.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR009693	Glucitol operon activator		PF06923|PIRSF011474
gutQ|gutQ|AP_003275.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000644|IPR001347|IPR004800	Cystathionine beta-synthase, core|Phosphosugar isomerase, KdsD/KpsF-type|Sugar isomerase (SIS)	GO:0005515|GO:0005975|GO:0016853|GO:0030246	G3DSA:3.10.580.10|G3DSA:3.40.50.10490|PF00571|PF01380|PIRSF004692|PS51371|PS51464|PTHR30550|SM00116|SSF53697|SSF54631|TIGR00393
gyrA|gyrA|AP_002828.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002205|IPR005743|IPR006691|IPR013757|IPR013758|IPR013760|IPR024946	Arginine repressor C-terminal-like domain|DNA gyrase, subunit A|DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel|DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta|DNA topoisomerase, type IIA, subunit A/C-terminal|DNA topoisomerase, type IIA-like domain|Type IIA DNA topoisomerase subunit A, alpha-helical domain	GO:0003677|GO:0003916|GO:0003918|GO:0005524|GO:0005694|GO:0006259|GO:0006265	G3DSA:1.10.268.10|G3DSA:2.120.10.90|G3DSA:3.30.1360.40|G3DSA:3.90.199.10|MF_01897|PF00521|PF03989|PTHR10169|PTHR10169:SF4|SM00434|SSF101904|SSF56719|TIGR01063
gyrB|gyrB|AP_004094.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000565|IPR001241|IPR002288|IPR003594|IPR006171|IPR011557|IPR013506|IPR013759|IPR013760|IPR014721|IPR018522|IPR020568	DNA gyrase B subunit, C-terminal|DNA gyrase, subunit B|DNA topoisomerase, type IIA|DNA topoisomerase, type IIA, central domain|DNA topoisomerase, type IIA, conserved site|DNA topoisomerase, type IIA, subunit B|DNA topoisomerase, type IIA, subunit B, domain 2|DNA topoisomerase, type IIA-like domain|Histidine kinase-like ATPase, ATP-binding domain|Ribosomal protein S5 domain 2-type fold|Ribosomal protein S5 domain 2-type fold, subgroup|Toprim domain	GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265	G3DSA:3.30.230.10|G3DSA:3.30.565.10|G3DSA:3.40.50.670|MF_01898|PF00204|PF00986|PF01751|PF02518|PR00418|PR01159|PS00177|PTHR10169|PTHR10169:SF20|SM00387|SM00433|SSF54211|SSF55874|SSF56719|TIGR01059
hcaB|hcaB|AP_003127.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002198|IPR002347|IPR016040|IPR020904|IPR023643	3-phenylpropionate-dihydrodiol/cinnamic acid-dihydrodiol dehydrogenase HcaB|Glucose/ribitol dehydrogenase|NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR|Short-chain dehydrogenase/reductase, conserved site	GO:0008152|GO:0016491|GO:0055114	G3DSA:3.40.50.720|MF_01647|PF00106|PR00080|PR00081|PS00061|PTHR24322|PTHR24322:SF6|SSF51735
hcaC|hcaC|AP_003126.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR017941|IPR023739	3-phenylpropionate/cinnamic acid dioxygenase, ferredoxin subunit|Rieske [2Fe-2S] iron-sulphur domain	GO:0016491|GO:0051537|GO:0055114	G3DSA:2.102.10.10|MF_01650|PF00355|PS51296|PTHR21496|SSF50022
hcaD|hcaD|AP_003128.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001327|IPR004099|IPR013027|IPR016156|IPR023744|IPR023753	3-phenylpropionate/cinnamic acid dioxygenase, ferredoxin--NAD(+) reductase subunit|FAD-dependent pyridine nucleotide-disulphide oxidoreductase|FAD/NAD-linked reductase, dimerisation|Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain|Pyridine nucleotide-disulphide oxidoreductase, NAD-binding domain|Pyridine nucleotide-disulphide oxidoreductase, dimerisation	GO:0005737|GO:0008860|GO:0016491|GO:0045454|GO:0050660|GO:0055114	G3DSA:3.30.390.30|G3DSA:3.50.50.60|MF_01651|PF00070|PF07992|PR00368|PR00411|PTHR22912|PTHR22912:SF33|SSF51905|SSF55424
hcaE|hcaE|AP_003124.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001663|IPR015879|IPR015881|IPR017941|IPR020875	3-phenylpropionate/cinnamic acid dioxygenase, alpha subunit|Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site|Aromatic-ring-hydroxylating dioxygenase, alpha subunit|Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain|Rieske [2Fe-2S] iron-sulphur domain	GO:0005506|GO:0006725|GO:0008695|GO:0016491|GO:0016705|GO:0016708|GO:0019439|GO:0051537|GO:0055114	G3DSA:2.102.10.10|G3DSA:3.90.380.10|MF_01648|PF00355|PF00848|PR00090|PS00570|PS51296|PTHR21266|PTHR21266:SF22|SSF50022|SSF55961
hcaF|hcaF|AP_003125.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000391|IPR023712	3-phenylpropionate/cinnamic acid dioxygenase, beta subunit|Aromatic-ring-hydroxylating dioxygenase, beta subunit	GO:0003824|GO:0006725|GO:0008695|GO:0055114	G3DSA:3.10.450.50|MF_01649|PF00866|SSF54427
hcaR|hcaR|AP_003123.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000847|IPR005119|IPR011991	LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain	GO:0003700|GO:0006355	G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PR00039|PS50931|PTHR30346|SSF46785|SSF53850
hcaT|hcaT|AP_003122.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR005276|IPR011701|IPR016196|IPR026032	Major facilitator superfamily|Major facilitator superfamily domain, general substrate transporter|Phenylproprionate permease|Phenylproprionate/maltose permease	GO:0016021|GO:0055085	G3DSA:1.20.1250.20|PF07690|PIRSF004925|PTHR24003|PTHR24003:SF11|SSF103473|TIGR00902
hchA|hchA|AP_002575.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002818|IPR017283	Molecular chaperone Hsp31 and glyoxalase 3|ThiJ/PfpI		G3DSA:3.40.50.880|MF_01046|PF01965|PIRSF037798|SSF52317
hcp|hcp|AP_001504.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004137|IPR010048|IPR011254|IPR016099|IPR016100	Hydroxylamine reductase|Hydroxylamine reductase/Ni-containing CO dehydrogenase|Prismane, alpha-bundle|Prismane-like|Prismane-like, alpha/beta-sandwich	GO:0003824|GO:0005737|GO:0016491|GO:0016661|GO:0051536|GO:0055114	G3DSA:1.20.1270.20|G3DSA:3.40.50.2030|MF_00069|PF03063|PIRSF000076|PTHR30109|PTHR30109:SF0|SSF56821|TIGR01703
hcr|hcr|AP_001503.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000951|IPR001041|IPR001433|IPR008333|IPR012675|IPR017927|IPR017938	2Fe-2S ferredoxin-type domain|Beta-grasp domain|Ferredoxin reductase-type FAD-binding domain|Oxidoreductase FAD/NAD(P)-binding|Oxidoreductase, FAD-binding domain|Phthalate dioxygenase reductase|Riboflavin synthase-like beta-barrel	GO:0009055|GO:0016491|GO:0051536|GO:0055114	G3DSA:2.40.30.10|G3DSA:3.10.20.30|G3DSA:3.40.50.80|PF00111|PF00175|PF00970|PR00409|PS51085|PS51384|PTHR19370|PTHR19370:SF29|SSF52343|SSF54292|SSF63380
hda|hda|AP_003082.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR013317|IPR017788|IPR020591|IPR022864|IPR027417	Chromosomal replication control, initiator (DnaA)/regulator (Hda)|Chromosomal replication control, initiator DnaA-like|Chromosomal replication control, regulator Hda|Chromosomal replication control, regulator Hda, Enterobacteriaceae|P-loop containing nucleoside triphosphate hydrolase	GO:0032297	G3DSA:1.10.8.60|G3DSA:3.40.50.300|MF_01158|PF00308|PR00051|PTHR30050|PTHR30050:SF0|SSF52540|TIGR03420
hdeA|hdeA|AP_004283.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR010486|IPR024972	HNS-dependent expression A|HNS-dependent expression A/B		G3DSA:1.10.890.10|PD065392|PF06411|PIRSF009564|SSF47752
hdeB|hdeB|AP_004284.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR010486	HNS-dependent expression A/B		G3DSA:1.10.890.10|PD070929|PF06411
hdeD|hdeD|AP_004282.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR005325	Protein of unknown function DUF308, membrane		PF03729
hdfR|hdfR|AP_004031.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000847|IPR005119|IPR011991|IPR020890	LysR, substrate-binding|Transcription regulator HTH, HdfR|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain	GO:0003677|GO:0003700|GO:0006355|GO:0045892	G3DSA:1.10.10.10|G3DSA:3.40.190.10|MF_01233|PF00126|PF03466|PR00039|PS50931|PTHR32389|PTHR32389:SF0|SSF46785|SSF53850
hdhA|hdhA|AP_002240.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002198|IPR002347|IPR016040|IPR020904	Glucose/ribitol dehydrogenase|NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR|Short-chain dehydrogenase/reductase, conserved site	GO:0008152|GO:0016491	G3DSA:3.40.50.720|PF00106|PR00080|PR00081|PS00061|PTHR24322|SSF51735
helD|helD|AP_001592.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000212|IPR003661|IPR014016|IPR014017|IPR022161|IPR027417	DNA helicase IV  N-terminal domain|DNA helicase, UvrD-like, C-terminal|DNA helicase, UvrD/REP type|P-loop containing nucleoside triphosphate hydrolase|Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain|UvrD-like Helicase, ATP-binding domain	GO:0000155|GO:0003677|GO:0004003|GO:0005524|GO:0007165|GO:0016020|GO:0016787	G3DSA:3.40.50.300|PF00580|PF12462|PF13361|PS51198|PTHR11070|SM00388|SSF52540
hemA|hemA|AP_001835.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000343|IPR006151|IPR015895|IPR015896|IPR016040|IPR018214	NAD(P)-binding domain|Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase|Tetrapyrrole biosynthesis, glutamyl-tRNA reductase|Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal|Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, conserved site|Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain	GO:0008883|GO:0033014|GO:0050661|GO:0055114	G3DSA:3.40.50.720|MF_00087|PF00745|PF01488|PF05201|PIRSF000445|PS00747|PTHR13812|PTHR13812:SF12|SSF51735|SSF69075|SSF69742|TIGR01035
hemB|hemB|AP_001020.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001731|IPR013785	Aldolase-type TIM barrel|Porphobilinogen synthase	GO:0003824|GO:0004655|GO:0033014|GO:0046872	G3DSA:3.20.20.70|PF00490|PIRSF001415|PR00144|PS00169|PTHR11458|PTHR11458:SF0|SM01004|SSF51569
hemC|hemC|AP_003995.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000860|IPR022417|IPR022418|IPR022419	Porphobilinogen deaminase, C-terminal|Porphobilinogen deaminase, N-terminal|Porphobilinogen deaminase, dipyrromethane cofactor binding site|Tetrapyrrole biosynthesis, hydroxymethylbilane synthase	GO:0004418|GO:0018160|GO:0033014	G3DSA:3.30.160.40|G3DSA:3.40.190.10|MF_00260|PF01379|PF03900|PIRSF001438|PR00151|PS00533|PTHR11557|PTHR11557:SF0|SSF53850|SSF54782|TIGR00212
hemD|hemD|AP_003996.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003754	Tetrapyrrole biosynthesis, uroporphyrinogen III synthase	GO:0004852|GO:0033014	G3DSA:3.40.50.10090|PF02602|SSF69618
hemE|hemE|AP_003821.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000257|IPR006361	Uroporphyrinogen decarboxylase (URO-D)|Uroporphyrinogen decarboxylase HemE	GO:0004853|GO:0006779	G3DSA:3.20.20.210|MF_00218|PF01208|PS00906|PS00907|PTHR21091|PTHR21091:SF2|SSF51726|TIGR01464
hemF|hemF|AP_003030.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001260|IPR018375	Coproporphyrinogen III oxidase, aerobic|Coproporphyrinogen III oxidase, conserved site	GO:0004109|GO:0006779|GO:0055114	G3DSA:3.40.1500.10|MF_00333|PF01218|PIRSF000166|PR00073|PS01021|PTHR10755|PTHR10755:SF0|SSF102886
hemG|hemG|AP_003952.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001226|IPR008254|IPR026816	Flavodoxin domain|Flavodoxin, conserved site|Flavodoxin/nitric oxide synthase	GO:0009055|GO:0010181|GO:0016491	G3DSA:3.40.50.360|PF12724|PS00201|PS50902|SSF52218
hemH|hemH|AP_001124.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001015|IPR019772	Ferrochelatase|Ferrochelatase, active site	GO:0004325|GO:0006783	G3DSA:3.40.50.1400|MF_00323|PF00762|PS00534|PTHR11108|PTHR11108:SF0|SSF53800|TIGR00109
hemL|hemL|AP_000815.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004639|IPR005814|IPR015421|IPR015422|IPR015424	Aminotransferase class-III|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2|Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase	GO:0003824|GO:0008483|GO:0030170|GO:0033014|GO:0042286	G3DSA:3.40.640.10|G3DSA:3.90.1150.10|MF_00375|PF00202|PIRSF000521|PS00600|PTHR11986|PTHR11986:SF5|SSF53383|TIGR00713
hemN|hemN|AP_003941.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004558|IPR006638|IPR007197|IPR010723|IPR023404	Coproporphyrinogen III oxidase, oxygen-independent,  HemN|Elongator protein 3/MiaB/NifB|HemN, C-terminal domain|Radical SAM|Radical SAM, alpha/beta horseshoe	GO:0003824|GO:0004109|GO:0005737|GO:0006779|GO:0051536|GO:0055114	G3DSA:3.80.30.20|PF04055|PF06969|PTHR13932|SM00729|SSF102114|TIGR00538
hemX|hemX|AP_003997.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR007470	HemX		PF04375
hemY|hemY|AP_003998.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR005254|IPR010817|IPR011990|IPR013026|IPR013105|IPR019734	HemY, N-terminal|Heme biosynthesis-associated TPR protein|Tetratricopeptide TPR2|Tetratricopeptide repeat|Tetratricopeptide repeat-containing domain|Tetratricopeptide-like helical	GO:0005515|GO:0016020|GO:0042168	G3DSA:1.25.40.10|PF07219|PF07719|PS50005|PS50293|SSF48452|TIGR00540
hepA|hepA|AP_000723.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000330|IPR001650|IPR014001|IPR022737|IPR023949|IPR027417	Helicase, C-terminal|Helicase, superfamily 1/2, ATP-binding domain|P-loop containing nucleoside triphosphate hydrolase|RNA polymerase recycling, bacterial, C-terminal|RNA polymerase-associated protein RapA|SNF2-related	GO:0003676|GO:0003677|GO:0004386|GO:0005524|GO:0006355|GO:0016817	G3DSA:3.40.50.300|MF_01821|PF00176|PF00271|PF12137|PS51192|PS51194|PTHR10799|PTHR10799:SF40|SM00487|SM00490|SSF52540
hflC|hflC|AP_004675.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001107|IPR001972|IPR010200	Band 7 protein|HflC|Stomatin	GO:0016020|GO:0016021|GO:0052547	PF01145|PIRSF005651|PTHR10264|PTHR10264:SF19|SM00244|SSF117892|TIGR01932
hflD|hflD|AP_001758.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR007451	Uncharacterised protein family UPF0274		G3DSA:1.10.3890.10|MF_00695|PD037115|PF04356|SSF101322
hflK|hflK|AP_004674.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001107|IPR001972|IPR010201|IPR020980	Band 7 protein|HflK|Menbrane protein HflK, N-terminal|Stomatin	GO:0016020|GO:0016021	PF01145|PF12221|PR00721|PTHR10264|PTHR10264:SF19|SM00244|SSF117892|TIGR01933
hflX|hflX|AP_004673.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR006073|IPR009022|IPR016496|IPR025121|IPR027417	Elongation factor G, III-V domain|GTP binding domain|GTPase HflX|GTPase HflX N-terminal domain|P-loop containing nucleoside triphosphate hydrolase	GO:0005525	G3DSA:3.40.50.300|MF_00900|PF01926|PF13167|PIRSF006809|PR00326|PTHR10229|PTHR10229:SF0|SSF52540|SSF54980|TIGR03156
hfq|hfq|AP_004672.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001163|IPR005001|IPR010920	Host factor Hfq|Like-Sm (LSM) domain|Ribonucleoprotein LSM domain	GO:0003723|GO:0006355	G3DSA:2.30.30.100|MF_00436|PF01423|SSF50182|TIGR02383
hha|hha|AP_001109.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR007985	Haemolysin expression modulating, HHA		G3DSA:1.20.1280.40|PF05321|SSF68989
hinT|hinT|AP_001729.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001310|IPR011146|IPR019808	HIT-like domain|Histidine triad (HIT) protein|Histidine triad, conserved site	GO:0003824	G3DSA:3.30.428.10|PF01230|PR00332|PS00892|PS51084|PTHR23089|PTHR23089:SF0|SSF54197
hipA|hipA|AP_002129.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR012893|IPR012894|IPR017508	HipA, N-terminal|HipA-like, C-terminal|HipA-like, N-terminal		PF07804|PF07805|PF13657|TIGR03071
hipB|hipB|AP_002130.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001387|IPR010982	Helix-turn-helix|Lambda repressor-like, DNA-binding domain	GO:0003677|GO:0043565	G3DSA:1.10.260.40|PF01381|PS50943|SM00530|SSF47413
hisA|hisA|AP_002625.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR006062|IPR006063|IPR011060|IPR013785|IPR023016	Aldolase-type TIM barrel|Histidine biosynthesis|Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase|Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA|Ribulose-phosphate binding barrel	GO:0000105|GO:0003824|GO:0003949|GO:0008152	G3DSA:3.20.20.70|MF_01014|PF00977|PTHR21235|PTHR21235:SF15|SSF51366|TIGR00007
hisB|hisB|AP_002623.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000807|IPR005954|IPR006543|IPR006549|IPR013954|IPR020565|IPR020566|IPR020568|IPR023214	HAD-like domain|HAD-superfamily hydrolase, subfamily IIIA|Histidine biosynthesis bifunctional protein HisB|Histidinol-phosphatase|Histidinol-phosphate phosphatase|Imidazoleglycerol-phosphate dehydratase|Imidazoleglycerol-phosphate dehydratase, conserved site|Polynucleotide kinase 3 phosphatase|Ribosomal protein S5 domain 2-type fold	GO:0000105|GO:0004401|GO:0004424|GO:0005737|GO:0016791	G3DSA:3.30.230.40|G3DSA:3.40.50.1000|MF_00076|MF_01022|PF00475|PF08645|PS00954|PS00955|PTHR23133|PTHR23133:SF2|SSF54211|SSF56784|TIGR01261|TIGR01656|TIGR01662
hisC|hisC|AP_002622.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001917|IPR004839|IPR005861|IPR015421|IPR015422|IPR015424	Aminotransferase, class I/classII|Aminotransferase, class-II, pyridoxal-phosphate binding site|Histidinol-phosphate aminotransferase family|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2	GO:0000105|GO:0003824|GO:0004400|GO:0008152|GO:0009058|GO:0016740|GO:0030170	G3DSA:3.40.640.10|G3DSA:3.90.1150.10|MF_01023|PF00155|PS00599|PTHR11751|PTHR11751:SF3|SSF53383|TIGR01141
hisD|hisD|AP_002621.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001692|IPR012131|IPR016161|IPR022695	Aldehyde/histidinol dehydrogenase|Histidinol dehydrogenase|Histidinol dehydrogenase, conserved site|Histidinol dehydrogenase, monofunctional	GO:0000105|GO:0004399|GO:0008152|GO:0008270|GO:0016491|GO:0051287|GO:0055114	G3DSA:3.40.50.1980|MF_01024|PF00815|PIRSF000099|PR00083|PS00611|PTHR21256|PTHR21256:SF2|SSF53720|TIGR00069
hisF|hisF|AP_002626.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004651|IPR006062|IPR011060|IPR013785	Aldolase-type TIM barrel|Histidine biosynthesis|Histidine biosynthesis, HisF|Ribulose-phosphate binding barrel	GO:0000105|GO:0000107|GO:0003824|GO:0005737|GO:0008152	G3DSA:3.20.20.70|MF_01013|PF00977|PTHR21235|SSF51366|TIGR00735
hisG|hisG|AP_002620.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001348|IPR011322|IPR013115|IPR013820|IPR015867|IPR018198|IPR020621	ATP phosphoribosyltransferase HisG|ATP phosphoribosyltransferase HisG, long form|ATP phosphoribosyltransferase, catalytic domain|ATP phosphoribosyltransferase, conserved site|Histidine biosynthesis HisG, C-terminal|Nitrogen regulatory PII-like, alpha/beta|Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal	GO:0000105|GO:0000287|GO:0003879|GO:0005737	G3DSA:3.30.70.120|G3DSA:3.40.190.10|MF_00079|PF01634|PF08029|PS01316|PTHR21403|SSF53850|SSF54913|TIGR00070|TIGR03455
hisH|hisH|AP_002624.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR010139|IPR017926	Glutamine amidotransferase|Imidazole glycerol phosphate synthase, subunit H	GO:0000105|GO:0005737|GO:0016763	G3DSA:3.40.50.880|MF_00278|PF00117|PIRSF000495|PR00096|PS51273|PTHR21235|SSF52317|TIGR01855
hisI|hisI|AP_002627.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002496|IPR008179|IPR021130|IPR023019	Histidine biosynthesis bifunctional protein HisIE|Phosphoribosyl-AMP cyclohydrolase domain|Phosphoribosyl-ATP pyrophosphohydrolase|Phosphoribosyl-ATP pyrophosphohydrolase-like	GO:0000105|GO:0004635|GO:0004636	MF_01019|MF_01020|PD002610|PF01502|PF01503|PTHR21256|SSF101386|SSF141734|TIGR03188
hisJ|hisJ|AP_002909.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001638|IPR005768|IPR018313	Extracellular solute-binding protein, family 3|Extracellular solute-binding protein, family 3, conserved site|Lysine-arginine-ornithine-binding periplasmic protein	GO:0005215|GO:0006810|GO:0030288	G3DSA:3.40.190.10|PF00497|PS01039|PTHR18966|SM00062|SSF53850|TIGR01096
hisL|hisL|AP_002619.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR012565	Histidine operon leader peptide	GO:0000105	PF08047
hisM|hisM|AP_002907.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000515|IPR010065	Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family|Binding-protein-dependent transport systems inner membrane component	GO:0005215|GO:0006810|GO:0016020|GO:0016021	G3DSA:1.10.3720.10|PF00528|PS50928|PTHR30450|SSF161098|TIGR01726
hisP|hisP|AP_002906.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003439|IPR003593|IPR017871|IPR027417	AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase	GO:0000166|GO:0005524|GO:0016887|GO:0017111	G3DSA:3.40.50.300|PF00005|PS00211|PS50893|PTHR24220|PTHR24220:SF179|SM00382|SSF52540
hisQ|hisQ|AP_002908.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000515|IPR010065	Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family|Binding-protein-dependent transport systems inner membrane component	GO:0005215|GO:0006810|GO:0016020|GO:0016021	G3DSA:1.10.3720.10|PF00528|PS50928|PTHR30133|SSF161098|TIGR01726
hisS|hisS|AP_003100.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002314|IPR004154|IPR004516|IPR006195|IPR015807	Aminoacyl-tRNA synthetase, class II|Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain|Anticodon-binding|Histidine-tRNA ligase|Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit	GO:0000166|GO:0004812|GO:0004821|GO:0005524|GO:0005737|GO:0006418|GO:0006427	G3DSA:3.30.930.10|G3DSA:3.40.50.800|MF_00127|PF00587|PF03129|PIRSF001549|PS50862|PTHR11476|SSF52954|SSF55681|TIGR00442
hlpA|hlpA|AP_000838.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR005632|IPR024930	Chaperone protein Skp|Skp domain	GO:0051082	G3DSA:3.30.910.20|PF03938|PIRSF002094|SM00935|SSF111384
hlyE|hlyE|AP_001807.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR027018	Hemolysin E	GO:0009405|GO:0044179	G3DSA:1.20.1170.10|PF06109|SSF58100
hmp|hmp|AP_003138.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000971|IPR001221|IPR001433|IPR008333|IPR009050|IPR012292|IPR017927|IPR017938|IPR023950	Ferredoxin reductase-type FAD-binding domain|Flavohemoprotein|Globin|Globin, structural domain|Globin-like|Oxidoreductase FAD/NAD(P)-binding|Oxidoreductase, FAD-binding domain|Phenol hydroxylase reductase|Riboflavin synthase-like beta-barrel	GO:0005506|GO:0008941|GO:0015671|GO:0016491|GO:0019825|GO:0020037|GO:0051409|GO:0055114|GO:0071949	G3DSA:1.10.490.10|G3DSA:2.40.30.10|G3DSA:3.40.50.80|MF_01252|PF00042|PF00175|PF00970|PR00410|PS01033|PS51384|PTHR22924|SSF46458|SSF52343|SSF63380
hns|hns|AP_001863.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001801|IPR027444|IPR027454	Histone-like protein H-NS|Histone-like protein H-NS family, oligomerisation domain|Histone-like protein H-NS, C-terminal domain	GO:0003677|GO:0005622|GO:0006355|GO:0046983	G3DSA:1.10.287.1050|G3DSA:4.10.430.10|PF00816|PIRSF002096|SM00528|SSF81273
hofB|hofB|AP_000768.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001482|IPR003593|IPR007831|IPR027417	AAA+ ATPase domain|General secretory system II, protein E, N-terminal|P-loop containing nucleoside triphosphate hydrolase|Type II secretion system protein E	GO:0000166|GO:0005524|GO:0005622|GO:0006810|GO:0017111	G3DSA:3.30.450.90|G3DSA:3.40.50.300|PF00437|PF05157|PS00662|PTHR30258|PTHR30258:SF1|SM00382|SSF52540
hofC|hofC|AP_000767.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001992|IPR003004|IPR018076	GspF/PilC family|Type II secretion system F domain|Type II secretion system conserved site	GO:0009306|GO:0016020	PF00482|PR00812|PS00874|PTHR30012
hofQ|hofQ|AP_004399.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001775|IPR004846|IPR005644|IPR011662|IPR013355	GspD/PilQ family|NolW-like|Secretin/TonB, short N-terminal|Type II/III secretion system|Type IV pilus secretin PilQ	GO:0009297|GO:0009306|GO:0019867	PF00263|PF03958|PF07660|PR00811|PR01032|PTHR30604|PTHR30604:SF0|SM00965|TIGR02515
hokA|hokA|AP_004237.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000021|IPR018084	Hok/gef cell toxic protein|Hok/gef cell toxic protein, conserved site	GO:0016020	PD005979|PF01848|PR00281|PS00556
hokB|hokB|AP_002043.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000021|IPR018084	Hok/gef cell toxic protein|Hok/gef cell toxic protein, conserved site	GO:0016020	PD005979|PF01848|PR00281|PS00556
hokC|hokC|AP_000682.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000021|IPR018084	Hok/gef cell toxic protein|Hok/gef cell toxic protein, conserved site	GO:0016020	PD005979|PF01848|PR00281|PS00556
hokD|hokD|AP_002184.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000021|IPR018084	Hok/gef cell toxic protein|Hok/gef cell toxic protein, conserved site	GO:0016020	PD005979|PF01848|PR00281|PS00556
hokE|hokE|AP_001227.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000021|IPR018084	Hok/gef cell toxic protein|Hok/gef cell toxic protein, conserved site	GO:0016020	PD005979|PF01848|PR00281|PS00556
holA|holA|AP_001289.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR005790|IPR008921|IPR010372|IPR027417	DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal|DNA polymerase III, delta|DNA polymerase III, delta subunit|P-loop containing nucleoside triphosphate hydrolase	GO:0003677|GO:0003887|GO:0006260|GO:0009360	G3DSA:1.10.8.60|G3DSA:1.20.272.20|G3DSA:3.40.50.300|PF06144|SSF48019|SSF52540|TIGR01128
holB|holB|AP_001725.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004622|IPR008921|IPR015199|IPR027417	DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal|DNA polymerase III, delta prime subunit|DNA polymerase III, delta subunit, C-terminal|P-loop containing nucleoside triphosphate hydrolase	GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360	G3DSA:1.10.8.10|G3DSA:1.20.272.10|G3DSA:3.40.50.300|PF09115|PF13177|PTHR11669|SSF48019|SSF52540|TIGR00678
holC|holC|AP_004755.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR007459	DNA polymerase III chi subunit, HolC	GO:0003677|GO:0003887|GO:0006260	G3DSA:3.40.50.10110|PF04364|SSF102400
holD|holD|AP_004859.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004615|IPR018382	DNA polymerase III, psi subunit|DNA polymerase III, psi subunit, subgroup	GO:0003887|GO:0006260|GO:0008408	G3DSA:3.40.50.10220|PD032475|PF03603|PIRSF029225|SSF102220|TIGR00664
holE|holE|AP_002462.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR009052|IPR011325	DNA polymerase III-theta, bacterial|DNA polymerase III-theta, core, bacterial	GO:0003677|GO:0003887|GO:0006260	G3DSA:1.10.1110.10|PD057609|PF06440|SSF46575
hpt|hpt|AP_000786.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000836|IPR005904	Hypoxanthine phosphoribosyl transferase|Phosphoribosyltransferase domain	GO:0004422|GO:0005737|GO:0006166|GO:0009116	G3DSA:3.40.50.2020|PF00156|PTHR22573|PTHR22573:SF9|SSF53271|TIGR01203
hrpA|hrpA|AP_002038.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001650|IPR003593|IPR007502|IPR010222|IPR011545|IPR011709|IPR014001|IPR024590|IPR027417	AAA+ ATPase domain|DNA/RNA helicase, DEAD/DEAH box type, N-terminal|Domain of unknown function DUF1605|Helicase, C-terminal|Helicase, superfamily 1/2, ATP-binding domain|Helicase-associated domain|P-loop containing nucleoside triphosphate hydrolase|RNA helicase, ATP-dependent DEAH box, HrpA, C-terminal|RNA helicase, ATP-dependent DEAH box, HrpA-type	GO:0000166|GO:0003676|GO:0004386|GO:0005524|GO:0008026|GO:0017111	G3DSA:3.40.50.300|PF00270|PF00271|PF04408|PF07717|PF11898|PS51192|PS51194|PTHR18934|SM00382|SM00487|SM00490|SM00847|SSF52540|TIGR01967
hrpB|hrpB|AP_000809.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001650|IPR007502|IPR010225|IPR011545|IPR013689|IPR014001|IPR027417	DNA/RNA helicase, DEAD/DEAH box type, N-terminal|Helicase, C-terminal|Helicase, superfamily 1/2, ATP-binding domain|Helicase-associated domain|P-loop containing nucleoside triphosphate hydrolase|RNA helicase, ATP-dependent DEAH box, HrpB-type|RNA helicase, ATP-dependent, HrpB type, C-terminal	GO:0003676|GO:0004386|GO:0005524|GO:0008026	G3DSA:3.40.50.300|PF00270|PF00271|PF04408|PF08482|PIRSF005496|PS51192|PS51194|PTHR18934|SM00487|SM00490|SM00847|SSF52540|TIGR01970
hscA|hscA|AP_003112.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR010236|IPR013126|IPR018181	Heat shock protein 70 family|Heat shock protein 70, conserved site|ISC system FeS cluster assembly, HscA chaperone	GO:0005524|GO:0006200|GO:0006457|GO:0016226|GO:0016887|GO:0051082	G3DSA:1.20.1270.10|G3DSA:2.60.34.10|G3DSA:3.30.30.30|G3DSA:3.30.420.40|G3DSA:3.90.640.10|MF_00679|PF00012|PR00301|PS00297|PS00329|PS01036|PTHR19375|PTHR19375:SF1|SSF100920|SSF100934|SSF53067|TIGR01991
hscB|hscB|AP_003113.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001623|IPR004640|IPR009073	Co-chaperone Hsc20|Co-chaperone HscB, C-terminal oligomerisation domain|DnaJ domain	GO:0006457|GO:0051087|GO:0051259	G3DSA:1.10.287.110|G3DSA:1.20.1280.20|MF_00682|PF00226|PF07743|PS50076|PTHR14021|PTHR14021:SF10|SM00271|SSF46565|SSF47144|TIGR00714
hscC|hscC|AP_001299.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR013126|IPR018181	Heat shock protein 70 family|Heat shock protein 70, conserved site		G3DSA:2.60.34.10|G3DSA:3.30.420.40|PF00012|PR00301|PS00297|PS00329|PS01036|PTHR19375|PTHR19375:SF1|SSF100920|SSF53067
hsdM|hsdM|AP_004838.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002052|IPR002296|IPR003356|IPR022749	DNA methylase, N-6 adenine-specific, conserved site|DNA methylase, adenine-specific|N6 adenine-specific DNA methyltransferase, N12 class|N6 adenine-specific DNA methyltransferase, N12 class, N-terminal	GO:0003676|GO:0003677|GO:0006306|GO:0008168|GO:0008170|GO:0009007|GO:0032259	G3DSA:3.40.50.150|PF02384|PF12161|PR00507|PS00092|PTHR30195|PTHR30195:SF2|SSF53335
hsdR|hsdR|AP_004839.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001650|IPR006935|IPR007409|IPR013670|IPR014001|IPR025285|IPR027417	Domain of unknown function DUF4145|EcoEI R protein C-terminal domain|Helicase, C-terminal|Helicase, superfamily 1/2, ATP-binding domain|Helicase/UvrB domain|P-loop containing nucleoside triphosphate hydrolase|Restriction endonuclease, type I, HsdR, N-terminal	GO:0003676|GO:0003677|GO:0003824|GO:0004386|GO:0004519|GO:0005524|GO:0006304|GO:0016787	G3DSA:3.40.50.300|PF00271|PF04313|PF04851|PF08463|PF13643|PTHR30195|PTHR30195:SF0|SM00487|SM00490|SSF52540
hsdS|hsdS|AP_004837.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000055	Restriction endonuclease, type I, HsdS	GO:0003677|GO:0006304	PF01420|PTHR30408|PTHR30408:SF0|SSF116734
hslJ|hslJ|AP_002006.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR005184	Domain of unknown function DUF306, Meta/HslJ		PF03724|PS51257
hslO|hslO|AP_004389.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000397|IPR016153|IPR016154|IPR023212	Heat shock protein Hsp33|Heat shock protein Hsp33, C-terminal|Heat shock protein Hsp33, N-terminal|Heat shock protein Hsp33, helix hairpin bin domain	GO:0005737|GO:0006457|GO:0051082	G3DSA:1.10.287.480|G3DSA:3.55.30.10|G3DSA:3.90.1280.10|MF_00117|PF01430|PIRSF005261|PTHR30111|PTHR30111:SF0|SSF118352|SSF64397
hslR|hslR|AP_004390.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002942|IPR025708	Heat shock protein 15|RNA-binding S4 domain	GO:0003677|GO:0003723|GO:0003727|GO:0034605|GO:0043023	G3DSA:3.10.290.10|PF01479|PIRSF016821|PS50889|SM00363|SSF55174
hslU|hslU|AP_003878.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003593|IPR003959|IPR004491|IPR013093|IPR019489|IPR027417	AAA+ ATPase domain|ATPase, AAA-2|ATPase, AAA-type, core|Clp ATPase, C-terminal|Heat shock protein HslU|P-loop containing nucleoside triphosphate hydrolase	GO:0000166|GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0017111|GO:0070011	G3DSA:1.10.8.10|G3DSA:1.10.8.60|G3DSA:3.40.50.300|MF_00249|PF00004|PF07724|PF10431|PTHR11262|PTHR11262:SF3|SM00382|SM01086|SSF52540|TIGR00390
hslV|hslV|AP_003877.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001353|IPR022281	ATP-dependent protease, HslV subunit|Proteasome, subunit alpha/beta	GO:0004298|GO:0005839|GO:0006508|GO:0009376|GO:0051603	G3DSA:3.60.20.10|MF_00248|PF00227|PTHR32194|PTHR32194:SF0|SSF56235|TIGR03692
hsrA|hsrA|AP_004033.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001411|IPR004638|IPR011701|IPR016196|IPR020846	Drug resistance transporter EmrB/QacA subfamily|Major facilitator superfamily|Major facilitator superfamily domain|Major facilitator superfamily domain, general substrate transporter|Tetracycline resistance protein TetB/drug resistance transporter	GO:0006810|GO:0016021|GO:0055085	G3DSA:1.20.1250.20|PF07690|PR01036|PS50850|PTHR24003|SSF103473|TIGR00711
htpG|htpG|AP_001122.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001404|IPR003594|IPR019805|IPR020568|IPR020575	Heat shock protein Hsp90|Heat shock protein Hsp90, N-terminal|Heat shock protein Hsp90, conserved site|Histidine kinase-like ATPase, ATP-binding domain|Ribosomal protein S5 domain 2-type fold	GO:0005524|GO:0006457|GO:0006950|GO:0051082	G3DSA:3.30.565.10|MF_00505|PF00183|PF02518|PIRSF002583|PR00775|PS00298|PTHR11528|PTHR11528:SF39|SM00387|SSF110942|SSF54211|SSF55874
htpX|htpX|AP_002449.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001915|IPR022919	Peptidase M48|Peptidase M48, protease HtpX, putative	GO:0004222|GO:0006508|GO:0016020	G3DSA:3.30.2010.10|MF_00188|PF01435|PTHR10120|PTHR10120:SF16
htrE|htrE|AP_000800.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000015|IPR018030|IPR025885|IPR025949	Fimbrial biogenesis outer membrane usher protein|Fimbrial membrane usher, conserved site|PapC N-terminal domain|PapC-like C-terminal domain	GO:0005215|GO:0005515|GO:0006810|GO:0016020	PF00577|PF13953|PF13954|PS01151|PTHR30451|PTHR30451:SF0|SSF141729
htrG|htrG|AP_003605.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003646|IPR016476	SH3 domain protein|SH3-like domain, bacterial		PF08239|PIRSF006158|SM00287|TIGR04211
htrL|htrL|AP_004173.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR011735	HtrL protein		PF09612|PTHR21579|PTHR21579:SF3|TIGR02192
hupA|hupA|AP_003818.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000119|IPR010992|IPR020816|IPR023630	DNA-binding protein HU/Integration host factor|Histone-like DNA-binding protein, conserved site|Histone-like bacterial DNA-binding protein|Integration host factor (IHF)-like DNA-binding domain	GO:0003677	G3DSA:4.10.520.10|PF00216|PR01727|PS00045|SM00411|SSF47729
hupB|hupB|AP_001090.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000119|IPR010992|IPR020816|IPR023630	DNA-binding protein HU/Integration host factor|Histone-like DNA-binding protein, conserved site|Histone-like bacterial DNA-binding protein|Integration host factor (IHF)-like DNA-binding domain	GO:0003677	G3DSA:4.10.520.10|PF00216|PR01727|PS00045|SM00411|SSF47729
hyaA|hyaA|AP_001601.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001821|IPR006137|IPR006311|IPR019546|IPR027394	Cytochrome-c3 hydrogenase, C-terminal|NADH:ubiquinone oxidoreductase-like, 20kDa subunit|Twin-arginine translocation pathway, signal sequence|Twin-arginine translocation pathway, signal sequence, bacterial/archaeal|[NiFe]-hydrogenase, small subunit	GO:0008137|GO:0008901|GO:0009375|GO:0048038|GO:0051536|GO:0051539|GO:0055114	G3DSA:3.40.50.700|G3DSA:4.10.480.10|PF01058|PIRSF000310|PR00614|PS51318|PTHR30013|PTHR30013:SF2|SSF56770|TIGR00391|TIGR01409
hyaB|hyaB|AP_001602.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001501|IPR018194	Nickel-dependent hydrogenase, large subunit|Nickel-dependent hydrogenase, large subunit, nickel binding site	GO:0008901|GO:0016151|GO:0055114	G3DSA:1.10.645.10|PF00374|PS00507|PS00508|PTHR11993|PTHR11993:SF11|SSF56762
hyaC|hyaC|AP_001603.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000516|IPR011577|IPR016174	Cytochrome b561, bacterial/Ni-hydrogenase|Di-haem cytochrome, transmembrane|Nickel-dependent hydrogenase b-type cytochrome subunit	GO:0005506|GO:0006810|GO:0009055|GO:0016020|GO:0016021|GO:0022904	G3DSA:1.20.950.20|PF00033|PF01292|PR00161|PS00882|PS00883|PTHR30485|SSF81342|TIGR02125
hyaD|hyaD|AP_001604.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000671|IPR004419|IPR023430	Peptidase A31, hydrogen uptake protein|Peptidase A31, hydrogenase expression/formation protein|Peptidase HybD-like domain	GO:0008047|GO:0008233|GO:0016485|GO:0046872	G3DSA:3.40.50.1450|PF01750|PR00446|PTHR30302|SSF53163|TIGR00072|TIGR00140
hyaE|hyaE|AP_001605.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR010893|IPR012336	Thioredoxin-like fold|[NiFe]-hydrogenase maturation factor  HyaE		G3DSA:3.40.30.10|PF07449|SSF52833
hyaF|hyaF|AP_001606.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR006894	HupH hydrogenase expression protein, C-terminal		PD005668|PF04809
hybA|hybA|AP_003551.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001450|IPR017896|IPR017900|IPR019546	4Fe-4S binding domain|4Fe-4S ferredoxin, iron-sulphur binding, conserved site|4Fe-4S ferredoxin-type, iron-sulpur binding domain|Twin-arginine translocation pathway, signal sequence, bacterial/archaeal	GO:0009055|GO:0051536	G3DSA:3.30.70.20|PF00037|PF12798|PF12838|PS00198|PS51379|PTHR11938|PTHR11938:SF10|SSF54862|TIGR01409
hybB|hybB|AP_003550.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR005614	NrfD family		PF03916|PTHR30074|PTHR30074:SF0
hybC|hybC|AP_003549.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001501|IPR018194	Nickel-dependent hydrogenase, large subunit|Nickel-dependent hydrogenase, large subunit, nickel binding site	GO:0008901|GO:0016151|GO:0055114	G3DSA:1.10.645.10|PF00374|PS00507|PS00508|PTHR11993|PTHR11993:SF11|SSF56762
hybD|hybD|AP_003548.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000671|IPR004419|IPR023430	Peptidase A31, hydrogen uptake protein|Peptidase A31, hydrogenase expression/formation protein|Peptidase HybD-like domain	GO:0008047|GO:0008233|GO:0016485|GO:0046872	G3DSA:3.40.50.1450|PF01750|PR00446|PTHR30302|SSF53163|TIGR00072|TIGR00140
hybE|hybE|AP_003547.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR023994	[NiFe]-hydrogenase assembly, chaperone, HybE		PD008308|PF11939|TIGR03993
hybF|hybF|AP_003546.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000688|IPR020538	Hydrogenase nickel incorporation protein HypA/HybF|Hydrogenase nickel incorporation protein HypA/HybF, conserved site	GO:0006464|GO:0016151	MF_00213|PF01155|PIRSF004761|PS01249|TIGR00100
hybG|hybG|AP_003545.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001109|IPR019812	Hydrogenase assembly chaperone, conserved site|Hydrogenase expression/formation protein, HupF/HypC		PF01455|PR00445|PS01097|SSF159127|TIGR00074
hybO|hybO|AP_003552.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001821|IPR006137|IPR006311|IPR019546|IPR027394	Cytochrome-c3 hydrogenase, C-terminal|NADH:ubiquinone oxidoreductase-like, 20kDa subunit|Twin-arginine translocation pathway, signal sequence|Twin-arginine translocation pathway, signal sequence, bacterial/archaeal|[NiFe]-hydrogenase, small subunit	GO:0008137|GO:0008901|GO:0009375|GO:0048038|GO:0051536|GO:0051539|GO:0055114	G3DSA:3.40.50.700|G3DSA:4.10.480.10|PF01058|PIRSF000310|PR00614|PS51318|PTHR30013|PTHR30013:SF4|SSF56770|TIGR00391|TIGR01409
hycA|hycA|AP_003292.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR021285	Transcription regulator, HycA		PF11046
hycB|hycB|AP_003291.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR017896	4Fe-4S ferredoxin-type, iron-sulpur binding domain	GO:0051536	G3DSA:3.30.70.20|PF13247|PTHR11938|PTHR11938:SF10|SSF54862
hycC|hycC|AP_003290.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001750|IPR003918	NADH:ubiquinone oxidoreductase|NADH:ubiquinone/plastoquinone oxidoreductase	GO:0008137|GO:0042773|GO:0055114	PF00361|PR01437|PTHR22773|PTHR22773:SF13
hycD|hycD|AP_003289.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001694|IPR018086	NADH:ubiquinone oxidoreductase, subunit 1, conserved site|NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H	GO:0016020|GO:0055114	PF00146|PS00667|PS00668|PTHR11432|PTHR11432:SF0
hycE|hycE|AP_003288.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001135|IPR001268|IPR001501|IPR014029	NADH-quinone oxidoreductase, subunit D|NADH:ubiquinone oxidoreductase, 30kDa subunit|NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site|Nickel-dependent hydrogenase, large subunit	GO:0008137|GO:0016151|GO:0016651|GO:0048038|GO:0051287|GO:0055114	G3DSA:1.10.645.10|PD001581|PF00329|PF00346|PF00374|PS00535|PTHR11993|PTHR11993:SF18|SSF143243|SSF56762
hycF|hycF|AP_003287.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001450|IPR017896|IPR017900	4Fe-4S binding domain|4Fe-4S ferredoxin, iron-sulphur binding, conserved site|4Fe-4S ferredoxin-type, iron-sulpur binding domain	GO:0009055|GO:0051536	G3DSA:3.30.70.20|PF00037|PS00198|PS51379|PTHR10849|SSF54862
hycG|hycG|AP_003286.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR006137|IPR006138|IPR014406	NADH-ubiquinone oxidoreductase, 20 Kd subunit|NADH:ubiquinone oxidoreductase-like, 20kDa subunit|[NiFe]-hydrogenase-3-type complex, small subunit/NADH:quinone oxidoreductase, subunit NuoB	GO:0008137|GO:0016651|GO:0048038|GO:0051539|GO:0055114	G3DSA:3.40.50.700|PF01058|PS01150|PTHR11995|PTHR11995:SF3|SSF56770
hycH|hycH|AP_003285.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR010005	Formate hydrogenlyase maturation HycH		PF07450
hycI|hycI|AP_003284.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000671|IPR004420|IPR023430	Peptidase A31, hydrogen uptake protein|Peptidase A31, hydrogenase maturation protease HycI|Peptidase HybD-like domain	GO:0008047|GO:0008233	G3DSA:3.40.50.1450|PF01750|PR00446|SSF53163|TIGR00072|TIGR00142
hydN|hydN|AP_003280.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001450|IPR017896|IPR017900	4Fe-4S binding domain|4Fe-4S ferredoxin, iron-sulphur binding, conserved site|4Fe-4S ferredoxin-type, iron-sulpur binding domain	GO:0009055|GO:0051536	G3DSA:3.30.70.20|PF00037|PF12798|PF12800|PS00198|PS51379|PTHR11938|PTHR11938:SF10|SSF54862
hyfA|hyfA|AP_003067.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001450|IPR017896|IPR017900	4Fe-4S binding domain|4Fe-4S ferredoxin, iron-sulphur binding, conserved site|4Fe-4S ferredoxin-type, iron-sulpur binding domain	GO:0009055|GO:0051536	G3DSA:3.30.70.20|PF00037|PF12798|PF12800|PS00198|PS51379|PTHR11938|PTHR11938:SF10|SSF54862
hyfB|hyfB|AP_003068.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001750|IPR003918	NADH:ubiquinone oxidoreductase|NADH:ubiquinone/plastoquinone oxidoreductase	GO:0008137|GO:0042773|GO:0055114	PF00361|PR01437|PTHR22773|PTHR22773:SF13
hyfC|hyfC|AP_003069.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001694|IPR018086	NADH:ubiquinone oxidoreductase, subunit 1, conserved site|NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H	GO:0016020|GO:0055114	PF00146|PS00668|PTHR11432|PTHR11432:SF0
hyfD|hyfD|AP_003070.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001750	NADH:ubiquinone/plastoquinone oxidoreductase	GO:0008137|GO:0042773|GO:0055114	PF00361|PR01434|PTHR22773|PTHR22773:SF46
hyfE|hyfE|AP_003071.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001133	NADH-ubiquinone oxidoreductase chain 4L/K	GO:0016651|GO:0042773|GO:0055114	PD037531|PF00420
hyfF|hyfF|AP_003072.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001750	NADH:ubiquinone/plastoquinone oxidoreductase	GO:0008137|GO:0042773|GO:0055114	PF00361|PR01434|PTHR22773|PTHR22773:SF56
hyfG|hyfG|AP_003073.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001135|IPR001268|IPR001501|IPR014029	NADH-quinone oxidoreductase, subunit D|NADH:ubiquinone oxidoreductase, 30kDa subunit|NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site|Nickel-dependent hydrogenase, large subunit	GO:0008137|GO:0016151|GO:0016651|GO:0048038|GO:0051287|GO:0055114	G3DSA:1.10.645.10|PD001581|PF00329|PF00346|PF00374|PS00535|PTHR11993|PTHR11993:SF18|SSF143243|SSF56762
hyfH|hyfH|AP_003074.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001450|IPR017896|IPR017900	4Fe-4S binding domain|4Fe-4S ferredoxin, iron-sulphur binding, conserved site|4Fe-4S ferredoxin-type, iron-sulpur binding domain	GO:0009055|GO:0051536	G3DSA:3.30.70.20|PF00037|PS00198|PS51379|PTHR10849|SSF54862
hyfI|hyfI|AP_003075.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR006137|IPR006138|IPR014406	NADH-ubiquinone oxidoreductase, 20 Kd subunit|NADH:ubiquinone oxidoreductase-like, 20kDa subunit|[NiFe]-hydrogenase-3-type complex, small subunit/NADH:quinone oxidoreductase, subunit NuoB	GO:0008137|GO:0016651|GO:0048038|GO:0051539|GO:0055114	G3DSA:3.40.50.700|PF01058|PS01150|PTHR11995|PTHR11995:SF3|SSF56770
hyfJ|hyfJ|AP_003076.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR010005	Formate hydrogenlyase maturation HycH		PF07450
hyfR|hyfR|AP_003077.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002078|IPR002197|IPR003018|IPR003593|IPR009057|IPR025662|IPR025943|IPR025944|IPR027417	AAA+ ATPase domain|DNA binding HTH domain,  Fis-type|GAF domain|Homeodomain-like|P-loop containing nucleoside triphosphate hydrolase|RNA polymerase sigma factor 54 interaction domain|Sigma-54 interaction domain, ATP-binding site 1|Sigma-54 interaction domain, ATP-binding site 2|Sigma-54 interaction domain, conserved site	GO:0000166|GO:0003677|GO:0003700|GO:0005515|GO:0005524|GO:0006355|GO:0008134|GO:0017111	G3DSA:1.10.10.60|G3DSA:1.10.8.60|G3DSA:3.30.450.40|G3DSA:3.40.50.300|PF00158|PF01590|PF02954|PS00675|PS00676|PS00688|PS50045|PTHR32071|PTHR32071:SF0|SM00065|SM00382|SSF46689|SSF52540|SSF55781
hyi|hyi|AP_001156.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR013022|IPR017643|IPR026040	Hydroxypyruvate isomerase|Hydroxypyruvate isomerase-like|Xylose isomerase-like, TIM barrel domain		G3DSA:3.20.20.150|PF01261|PIRSF006241|PTHR12110|SSF51658|TIGR03234
hypA|hypA|AP_003293.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000688|IPR020538	Hydrogenase nickel incorporation protein HypA/HybF|Hydrogenase nickel incorporation protein HypA/HybF, conserved site	GO:0006464|GO:0016151	MF_00213|PF01155|PIRSF004761|PS01249|TIGR00100
hypB|hypB|AP_003294.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003495|IPR004392|IPR012202|IPR027417	CobW/HypB/UreG domain|Hydrogenase accessory protein HypB|P-loop containing nucleoside triphosphate hydrolase|[NiFe]-hydrogenase/urease maturation factor, Ni2-binding GTPase	GO:0003924|GO:0006461|GO:0016151	G3DSA:3.40.50.300|PF02492|PIRSF005624|PTHR30134|PTHR30134:SF0|SSF52540|TIGR00073
hypC|hypC|AP_003295.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001109|IPR019812	Hydrogenase assembly chaperone, conserved site|Hydrogenase expression/formation protein, HupF/HypC		PF01455|PR00445|PS01097|SSF159127|TIGR00074
hypD|hypD|AP_003296.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002780	Hydrogenase formation HypD protein	GO:0046872	PF01924|PIRSF005622|PTHR30149|PTHR30149:SF0|TIGR00075
hypE|hypE|AP_003297.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000728|IPR010918|IPR011854|IPR016188	AIR synthase related protein, N-terminal domain|AIR synthase-related protein, C-terminal domain|Hydrogenase expression/formation protein HypE|PurM, N-terminal-like	GO:0003824	G3DSA:3.30.1330.10|G3DSA:3.90.650.10|PF00586|PF02769|PIRSF005644|PTHR30303|PTHR30303:SF0|SSF55326|SSF56042|TIGR02124
hypF|hypF|AP_003279.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001792|IPR004421|IPR006070|IPR011125|IPR017945|IPR017968	Acylphosphatase, conserved site|Acylphosphatase-like|Carbamoyltransferase, HypF-type|DHBP synthase RibB-like alpha/beta domain|YrdC-like domain|Zinc finger, HypF-type	GO:0003725|GO:0008270|GO:0016743|GO:0046872|GO:0046944	G3DSA:3.30.70.100|G3DSA:3.90.870.10|PF00708|PF01300|PF07503|PIRSF006256|PS00150|PS51160|PS51163|PTHR10029|PTHR10029:SF4|SSF54975|SSF55821|TIGR00143
hyuA|hyuA|AP_003433.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR011059|IPR011778|IPR023766	D-phenylhydantoinase|Hydantoinase/dihydropyrimidinase|Metal-dependent hydrolase, composite domain	GO:0005737|GO:0006208|GO:0016810|GO:0016812	G3DSA:2.30.40.10|G3DSA:3.20.20.140|MF_01644|PF13147|PTHR11647|PTHR11647:SF1|SSF51338|SSF51556|TIGR02033
iaaA|iaaA|AP_001459.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000246	Peptidase T2, asparaginase 2	GO:0016787	PF01112|PTHR10188|PTHR10188:SF7|SSF56235
iadA|iadA|AP_004820.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR010229|IPR011059	Metal-dependent hydrolase, composite domain|Peptidase M38, beta-aspartyl dipeptidase	GO:0008798|GO:0016810	G3DSA:2.30.40.10|G3DSA:3.20.20.140|PF13594|PIRSF001238|PTHR11647|PTHR11647:SF21|SSF51338|SSF51556|TIGR01975
iap|iap|AP_003320.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR007484	Peptidase M28	GO:0006508|GO:0008233	G3DSA:3.40.630.10|PF04389|SSF53187
ibpA|ibpA|AP_004106.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002068|IPR008978|IPR023728	Alpha crystallin/Hsp20 domain|HSP20-like chaperone|Small heat shock protein IbpA		G3DSA:2.60.40.790|MF_02000|PF00011|PS01031|PTHR11527|PTHR11527:SF75|SSF49764
ibpB|ibpB|AP_004107.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002068|IPR008978|IPR022848	Alpha crystallin/Hsp20 domain|HSP20-like chaperone|Small heat shock protein IbpB		G3DSA:2.60.40.790|MF_02001|PF00011|PS01031|PTHR11527|SSF49764
icd|icd|AP_001762.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001804|IPR004439|IPR019818|IPR024084	Isocitrate and isopropylmalate dehydrogenases family|Isocitrate dehydrogenase NADP-dependent, dimeric, prokaryotic|Isocitrate/isopropylmalate dehydrogenase, conserved site|Isopropylmalate dehydrogenase-like domain	GO:0000287|GO:0004450|GO:0006099|GO:0016616|GO:0051287|GO:0055114	G3DSA:3.40.718.10|PF00180|PS00470|PTHR11835|PTHR11835:SF1|SSF53659|TIGR00183
iclR|iclR|AP_004519.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR005471|IPR011991|IPR014757	Transcription regulator IclR, C-terminal|Transcription regulator IclR, N-terminal|Winged helix-turn-helix DNA-binding domain	GO:0003677|GO:0006355	G3DSA:1.10.10.10|G3DSA:3.30.450.40|PF01614|PF09339|PS51077|PS51078|PTHR30136|PTHR30136:SF0|SM00346|SSF46785|SSF55781
idi|idi|AP_003448.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000086|IPR011876|IPR015797	Isopentenyl-diphosphate delta-isomerase, type 1|NUDIX hydrolase domain|NUDIX hydrolase domain-like	GO:0004452|GO:0008299|GO:0016787	G3DSA:3.90.79.10|MF_00202|PF00293|PIRSF018427|PS51462|PTHR10885|SSF55811|TIGR02150
idnD|idnD|AP_004763.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002085|IPR011032|IPR013149|IPR013154|IPR016040	Alcohol dehydrogenase GroES-like|Alcohol dehydrogenase superfamily, zinc-type|Alcohol dehydrogenase, C-terminal|GroES-like|NAD(P)-binding domain	GO:0008270|GO:0016491|GO:0055114	G3DSA:3.40.50.720|G3DSA:3.90.180.10|PF00107|PF08240|PTHR11695|PTHR11695:SF38|SSF50129|SSF51735
idnK|idnK|AP_004764.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000623|IPR006001|IPR027417	Carbohydrate kinase, thermoresistant glucokinase|P-loop containing nucleoside triphosphate hydrolase|Shikimate kinase/Threonine synthase-like 1	GO:0005975|GO:0016301	G3DSA:3.40.50.300|PF01202|PTHR11603|PTHR11603:SF49|SSF52540|TIGR01313
idnO|idnO|AP_004762.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002198|IPR002347|IPR016040|IPR020904	Glucose/ribitol dehydrogenase|NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR|Short-chain dehydrogenase/reductase, conserved site	GO:0008152|GO:0016491	G3DSA:3.40.50.720|PF00106|PR00080|PR00081|PS00061|PTHR24316|PTHR24316:SF67|SSF51735
idnR|idnR|AP_004760.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000843|IPR010982	Lambda repressor-like, DNA-binding domain|Transcription regulator HTH, LacI	GO:0003677|GO:0003700|GO:0005622|GO:0006355	G3DSA:1.10.260.40|G3DSA:3.40.50.2300|PF00356|PF13377|PS00356|PS50932|PTHR30146|PTHR30146:SF2|SM00354|SSF47413|SSF53822
idnT|idnT|AP_004761.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003474	Gluconate transporter	GO:0015128|GO:0016020|GO:0035429	PF02447|PIRSF002746|PTHR30354|TIGR00791
ihfA|ihfA|AP_002332.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000119|IPR005684|IPR010992|IPR020816|IPR023630	DNA-binding protein HU/Integration host factor|Histone-like DNA-binding protein, conserved site|Histone-like bacterial DNA-binding protein|Integration host factor (IHF)-like DNA-binding domain|Integration host factor, alpha subunit	GO:0003677|GO:0006310|GO:0006355|GO:0006417	G3DSA:4.10.520.10|MF_00380|PF00216|PR01727|PS00045|SM00411|SSF47729|TIGR00987
ihfB|ihfB|AP_001542.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000119|IPR005685|IPR010992|IPR020816|IPR023630	DNA-binding protein HU/Integration host factor|Histone-like DNA-binding protein, conserved site|Histone-like bacterial DNA-binding protein|Integration host factor (IHF)-like DNA-binding domain|Integration host factor, beta subunit	GO:0003677|GO:0005694|GO:0006310|GO:0006355	G3DSA:4.10.520.10|MF_00381|PF00216|PR01727|PS00045|SM00411|SSF47729|TIGR00988
ileS|ileS|AP_000690.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001412|IPR002300|IPR002301|IPR009008|IPR009080|IPR010663|IPR013155|IPR014729|IPR023585	Aminoacyl-tRNA synthetase, class 1a, anticodon-binding|Aminoacyl-tRNA synthetase, class I, conserved site|Aminoacyl-tRNA synthetase, class Ia|Isoleucine-tRNA ligase|Isoleucine-tRNA ligase, type 1|Rossmann-like alpha/beta/alpha sandwich fold|Valyl/Leucyl/Isoleucyl-tRNA synthetase, class I, anticodon-binding|Valyl/Leucyl/Isoleucyl-tRNA synthetase, class Ia, editing domain|Zinc finger, DNA glycosylase/AP lyase/isoleucyl tRNA synthetase	GO:0000166|GO:0002161|GO:0003824|GO:0004812|GO:0004822|GO:0005524|GO:0005737|GO:0006418|GO:0006428	G3DSA:1.10.730.10|G3DSA:3.40.50.620|G3DSA:3.90.740.10|MF_02002|PF00133|PF06827|PF08264|PR00984|PS00178|PTHR11946|PTHR11946:SF9|SSF47323|SSF50677|SSF52374|TIGR00392
ilvA|ilvA|AP_004024.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000634|IPR001721|IPR001926|IPR005787	Serine/threonine dehydratase, pyridoxal-phosphate-binding site|Threonine dehydratase, C-terminal regulatory domain|Threonine dehydratase, biosynthetic|Tryptophan synthase beta subunit-like PLP-dependent enzymes superfamily	GO:0004794|GO:0006520|GO:0009097|GO:0030170	G3DSA:3.40.1020.10|G3DSA:3.40.50.1100|PF00291|PF00585|PS00165|PTHR10314|PTHR10314:SF30|SSF53686|SSF55021|TIGR01124
ilvB|ilvB|AP_004121.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000399|IPR011766|IPR012000|IPR012001|IPR012846	Acetolactate synthase, large subunit, biosynthetic|TPP-binding enzyme, conserved site|Thiamine pyrophosphate enzyme, C-terminal TPP-binding|Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain|Thiamine pyrophosphate enzyme, central domain	GO:0000287|GO:0003824|GO:0003984|GO:0009082|GO:0030976|GO:0050660	G3DSA:3.40.50.1220|G3DSA:3.40.50.970|PF00205|PF02775|PF02776|PS00187|PTHR18968|PTHR18968:SF13|SSF52467|SSF52518|TIGR00118
ilvC|ilvC|AP_004022.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000506|IPR008927|IPR013023|IPR013116|IPR013328|IPR014359|IPR016040	6-phosphogluconate dehydrogenase, C-terminal-like|Acetohydroxy acid isomeroreductase|Acetohydroxy acid isomeroreductase C-terminal|Acetohydroxy acid isomeroreductase, catalytic|Dehydrogenase, multihelical|Ketol-acid reductoisomerase, gammaproteobacteria|NAD(P)-binding domain	GO:0004455|GO:0008652|GO:0009082|GO:0016491|GO:0016616|GO:0050661|GO:0050662|GO:0055114	G3DSA:1.10.1040.10|G3DSA:3.40.50.720|MF_00435|PF01450|PF07991|PIRSF000116|PTHR21371|PTHR21371:SF2|SSF48179|SSF51735|TIGR00465
ilvD|ilvD|AP_004025.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000581|IPR004404|IPR015928|IPR020558	Aconitase/3-isopropylmalate dehydratase, swivel|Dihydroxy-acid dehydratase|Dihydroxy-acid/6-phosphogluconate dehydratase|Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site	GO:0003824|GO:0004160|GO:0008152|GO:0009082	MF_00012|PF00920|PS00886|PS00887|PTHR21000|SSF143975|SSF52016|TIGR00110
ilvE|ilvE|AP_004026.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001544|IPR005785|IPR018300	Aminotransferase, class IV|Aminotransferase, class IV, conserved site|Branched-chain amino acid aminotransferase I	GO:0003824|GO:0004084|GO:0008152|GO:0009081	G3DSA:3.20.10.10|G3DSA:3.30.470.10|PF01063|PS00770|PTHR11825|PTHR11825:SF7|SSF56752|TIGR01122
ilvH|ilvH|AP_000742.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004789|IPR019455	Acetolactate synthase, small subunit|Acetolactate synthase, small subunit, C-terminal	GO:0003984|GO:0009082	G3DSA:3.30.70.1150|G3DSA:3.30.70.260|PD002844|PF10369|PF13710|PTHR30239|PTHR30239:SF0|SSF55021|TIGR00119
ilvI|ilvI|AP_000741.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000399|IPR011766|IPR012000|IPR012001|IPR012846	Acetolactate synthase, large subunit, biosynthetic|TPP-binding enzyme, conserved site|Thiamine pyrophosphate enzyme, C-terminal TPP-binding|Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain|Thiamine pyrophosphate enzyme, central domain	GO:0000287|GO:0003824|GO:0003984|GO:0009082|GO:0030976|GO:0050660	G3DSA:3.40.50.1220|G3DSA:3.40.50.970|PF00205|PF02775|PF02776|PS00187|PTHR18968|PTHR18968:SF13|SSF52467|SSF52518|TIGR00118
ilvL|ilvL|AP_004028.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR012567	IlvGEDA operon leader peptide	GO:0009082	PF08046
ilvM|ilvM|AP_004027.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091				G3DSA:3.30.70.260|PD002844|PF13710|SSF55021
ilvN|ilvN|AP_004122.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002912	ACT domain	GO:0008152|GO:0016597	G3DSA:3.30.70.260|PD002844|PF01842|SSF55021
ilvY|ilvY|AP_004023.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000847|IPR005119|IPR011991	LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain	GO:0003700|GO:0006355	G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PR00039|PTHR30126|SSF46785|SSF53850
imp|imp|AP_000718.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR005653|IPR007543|IPR020889	Lipopolysaccharide assembly, LptD|Organic solvent tolerance protein, C-terminal|Organic solvent tolerance-like, N-terminal	GO:0009279|GO:0010033|GO:0015920|GO:0016044|GO:0019867|GO:0043165	G3DSA:2.60.450.10|MF_01411|PF03968|PF04453|PTHR30189
inaA|inaA|AP_002834.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR010440|IPR011009|IPR027023	Lipopolysaccharide kinase|Protein kinase-like domain|Putative lipopolysaccharide kinase InaA	GO:0005524|GO:0009103|GO:0016020|GO:0016772|GO:0016773	PF06293|PIRSF026326|SSF56112
infA|infA|AP_001514.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004368|IPR006196|IPR012340|IPR022967	Nucleic acid-binding, OB-fold|RNA-binding domain, S1|RNA-binding domain, S1, IF1 type|Translation initiation factor IF-1	GO:0003723|GO:0003743|GO:0006413	G3DSA:2.40.50.140|MF_00075|PF01176|PS50832|SM00316|SSF50249|TIGR00008
infB|infB|AP_003713.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000178|IPR000795|IPR004161|IPR005225|IPR006847|IPR009000|IPR009061|IPR013575|IPR015760|IPR023115|IPR027417	DNA binding domain, putative|Elongation factor, GTP-binding domain|Initiation factor 2 associated domain, bacterial|P-loop containing nucleoside triphosphate hydrolase|Small GTP-binding protein domain|Translation elongation factor EFTu/EF1A, domain 2|Translation elongation/initiation factor/Ribosomal, beta-barrel|Translation initiation factor IF- 2|Translation initiation factor IF- 2, domain 3|Translation initiation factor IF-2, N-terminal|Translation initiation factor aIF-2, bacterial-like	GO:0000166|GO:0003743|GO:0003924|GO:0005525|GO:0005622|GO:0006413	G3DSA:2.40.30.10|G3DSA:3.30.56.50|G3DSA:3.40.50.10050|G3DSA:3.40.50.300|MF_00100_B|PF00009|PF03144|PF04760|PF08364|PF11987|PS01176|PTHR23115|PTHR23115:SF41|SSF46955|SSF50447|SSF52156|SSF52540|TIGR00231|TIGR00487
infC|infC|AP_002338.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001288|IPR019813|IPR019814|IPR019815	Translation initiation factor 3|Translation initiation factor 3, C-terminal|Translation initiation factor 3, N-terminal|Translation initiation factor 3, conserved site	GO:0003743|GO:0006413	G3DSA:3.10.20.80|G3DSA:3.30.110.10|MF_00080|PF00707|PF05198|PS00938|PTHR10938|SSF54364|SSF55200|TIGR00168
insA|insA|AP_000686.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003220|IPR024431	Insertion element IS1 protein InsA, N-terminal|Insertion element IS1 protein InsA, helix-turn-helix domain	GO:0006313	PF03811|PF12759
insA|insA|AP_000918.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003220|IPR024431	Insertion element IS1 protein InsA, N-terminal|Insertion element IS1 protein InsA, helix-turn-helix domain	GO:0006313	PF03811|PF12759
insA|insA|AP_000929.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003220|IPR024431	Insertion element IS1 protein InsA, N-terminal|Insertion element IS1 protein InsA, helix-turn-helix domain	GO:0006313	PF03811|PF12759
insA|insA|AP_001617.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003220|IPR024431	Insertion element IS1 protein InsA, N-terminal|Insertion element IS1 protein InsA, helix-turn-helix domain	GO:0006313	PF03811|PF12759
insA|insA|AP_002889.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003220|IPR024431	Insertion element IS1 protein InsA, N-terminal|Insertion element IS1 protein InsA, helix-turn-helix domain	GO:0006313	PF03811|PF12759
insA|insA|AP_004348.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003220|IPR024431	Insertion element IS1 protein InsA, N-terminal|Insertion element IS1 protein InsA, helix-turn-helix domain	GO:0006313	PF03811|PF12759
insA|insA|AP_004784.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003220|IPR024431	Insertion element IS1 protein InsA, N-terminal|Insertion element IS1 protein InsA, helix-turn-helix domain	GO:0006313	PF03811|PF12759
insB|insB|AP_000685.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR005063	Transposase, IS1	GO:0003677|GO:0004803|GO:0006313	PF03400
insB|insB|AP_000917.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR005063	Transposase, IS1	GO:0003677|GO:0004803|GO:0006313	PF03400
insB|insB|AP_000928.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR005063	Transposase, IS1	GO:0003677|GO:0004803|GO:0006313	PF03400
insB|insB|AP_001618.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR005063	Transposase, IS1	GO:0003677|GO:0004803|GO:0006313	PF03400
insB|insB|AP_002888.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR005063	Transposase, IS1	GO:0003677|GO:0004803|GO:0006313	PF03400
insB|insB|AP_004347.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR005063	Transposase, IS1	GO:0003677|GO:0004803|GO:0006313	PF03400
insC|insC|AP_001011.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002514|IPR009057	Homeodomain-like|Transposase IS3/IS911family	GO:0003677|GO:0004803|GO:0006313	G3DSA:1.10.10.60|PF01527|SSF46689
insC|insC|AP_001670.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002514|IPR009057	Homeodomain-like|Transposase IS3/IS911family	GO:0003677|GO:0004803|GO:0006313	G3DSA:1.10.10.60|PF01527|SSF46689
insC|insC|AP_001867.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002514|IPR009057	Homeodomain-like|Transposase IS3/IS911family	GO:0003677|GO:0004803|GO:0006313	G3DSA:1.10.10.60|PF01527|SSF46689
insC|insC|AP_002029.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002514|IPR009057	Homeodomain-like|Transposase IS3/IS911family	GO:0003677|GO:0004803|GO:0006313	G3DSA:1.10.10.60|PF01527|SSF46689
insC|insC|AP_002597.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002514|IPR009057	Homeodomain-like|Transposase IS3/IS911family	GO:0003677|GO:0004803|GO:0006313	G3DSA:1.10.10.60|PF01527|SSF46689
insC|insC|AP_002816.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002514|IPR009057	Homeodomain-like|Transposase IS3/IS911family	GO:0003677|GO:0004803|GO:0006313	G3DSA:1.10.10.60|PF01527|SSF46689
insC|insC|AP_003422.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002514|IPR009057	Homeodomain-like|Transposase IS3/IS911family	GO:0003677|GO:0004803|GO:0006313	G3DSA:1.10.10.60|PF01527|SSF46689
insC|insC|AP_003594.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002514|IPR009057	Homeodomain-like|Transposase IS3/IS911family	GO:0003677|GO:0004803|GO:0006313	G3DSA:1.10.10.60|PF01527|SSF46689
insC|insC|AP_004077.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002514|IPR009057	Homeodomain-like|Transposase IS3/IS911family	GO:0003677|GO:0004803|GO:0006313	G3DSA:1.10.10.60|PF01527|SSF46689
insC|insC|AP_004767.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002514|IPR009057	Homeodomain-like|Transposase IS3/IS911family	GO:0003677|GO:0004803|GO:0006313	G3DSA:1.10.10.60|PF01527|SSF46689
insD|insD|AP_001012.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001584|IPR012337|IPR025948	HTH-like domain|Integrase, catalytic core|Ribonuclease H-like domain	GO:0003676|GO:0015074	G3DSA:3.30.420.10|PF00665|PF13276|PS50994|SSF53098
insD|insD|AP_001669.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001584|IPR012337|IPR025948	HTH-like domain|Integrase, catalytic core|Ribonuclease H-like domain	GO:0003676|GO:0015074	G3DSA:3.30.420.10|PF00665|PF13276|PS50994|SSF53098
insD|insD|AP_001868.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001584|IPR012337|IPR025948	HTH-like domain|Integrase, catalytic core|Ribonuclease H-like domain	GO:0003676|GO:0015074	G3DSA:3.30.420.10|PF00665|PF13276|PS50994|SSF53098
insD|insD|AP_002028.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001584|IPR012337|IPR025948	HTH-like domain|Integrase, catalytic core|Ribonuclease H-like domain	GO:0003676|GO:0015074	G3DSA:3.30.420.10|PF00665|PF13276|PS50994|SSF53098
insD|insD|AP_002199.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001584|IPR012337	Integrase, catalytic core|Ribonuclease H-like domain	GO:0003676|GO:0015074	G3DSA:3.30.420.10|PF00665|PS50994|SSF53098
insD|insD|AP_002596.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001584|IPR012337|IPR025948	HTH-like domain|Integrase, catalytic core|Ribonuclease H-like domain	GO:0003676|GO:0015074	G3DSA:3.30.420.10|PF00665|PF13276|PS50994|SSF53098
insD|insD|AP_002815.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001584|IPR012337|IPR025948	HTH-like domain|Integrase, catalytic core|Ribonuclease H-like domain	GO:0003676|GO:0015074	G3DSA:3.30.420.10|PF00665|PF13276|PS50994|SSF53098
insD|insD|AP_003421.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001584|IPR012337|IPR025948	HTH-like domain|Integrase, catalytic core|Ribonuclease H-like domain	GO:0003676|GO:0015074	G3DSA:3.30.420.10|PF00665|PF13276|PS50994|SSF53098
insD|insD|AP_003595.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001584|IPR012337|IPR025948	HTH-like domain|Integrase, catalytic core|Ribonuclease H-like domain	GO:0003676|GO:0015074	G3DSA:3.30.420.10|PF00665|PF13276|PS50994|SSF53098
insD|insD|AP_004076.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001584|IPR012337|IPR025948	HTH-like domain|Integrase, catalytic core|Ribonuclease H-like domain	GO:0003676|GO:0015074	G3DSA:3.30.420.10|PF00665|PF13276|PS50994|SSF53098
insD|insD|AP_004768.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001584|IPR012337|IPR025948	HTH-like domain|Integrase, catalytic core|Ribonuclease H-like domain	GO:0003676|GO:0015074	G3DSA:3.30.420.10|PF00665|PF13276|PS50994|SSF53098
insE|insE|AP_000953.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002514|IPR009057	Homeodomain-like|Transposase IS3/IS911family	GO:0003677|GO:0004803|GO:0006313	G3DSA:1.10.10.60|PF01527|SSF46689
insE|insE|AP_001024.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002514|IPR009057	Homeodomain-like|Transposase IS3/IS911family	GO:0003677|GO:0004803|GO:0006313	G3DSA:1.10.10.60|PF01527|SSF46689
insE|insE|AP_001185.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002514|IPR009057	Homeodomain-like|Transposase IS3/IS911family	GO:0003677|GO:0004803|GO:0006313	G3DSA:1.10.10.60|PF01527|SSF46689
insE|insE|AP_001656.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002514|IPR009057	Homeodomain-like|Transposase IS3/IS911family	GO:0003677|GO:0004803|GO:0006313	G3DSA:1.10.10.60|PF01527|SSF46689
insE|insE|AP_002685.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002514|IPR009057	Homeodomain-like|Transposase IS3/IS911family	GO:0003677|GO:0004803|GO:0006313	G3DSA:1.10.10.60|PF01527|SSF46689
insF|insF|AP_000954.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001584|IPR012337|IPR025948	HTH-like domain|Integrase, catalytic core|Ribonuclease H-like domain	GO:0003676|GO:0015074	G3DSA:3.30.420.10|PF00665|PF13276|PS50994|PTHR32552|PTHR32552:SF1|SSF53098
insF|insF|AP_001023.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001584|IPR012337|IPR025948	HTH-like domain|Integrase, catalytic core|Ribonuclease H-like domain	GO:0003676|GO:0015074	G3DSA:3.30.420.10|PF00665|PF13276|PS50994|PTHR32552|PTHR32552:SF1|SSF53098
insF|insF|AP_001186.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001584|IPR012337|IPR025948	HTH-like domain|Integrase, catalytic core|Ribonuclease H-like domain	GO:0003676|GO:0015074	G3DSA:3.30.420.10|PF00665|PF13276|PS50994|PTHR32552|PTHR32552:SF1|SSF53098
insF|insF|AP_001655.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001584|IPR012337|IPR025948	HTH-like domain|Integrase, catalytic core|Ribonuclease H-like domain	GO:0003676|GO:0015074	G3DSA:3.30.420.10|PF00665|PF13276|PS50994|PTHR32552|PTHR32552:SF1|SSF53098
insF|insF|AP_002686.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001584|IPR012337|IPR025948	HTH-like domain|Integrase, catalytic core|Ribonuclease H-like domain	GO:0003676|GO:0015074	G3DSA:3.30.420.10|PF00665|PF13276|PS50994|PTHR32552|PTHR32552:SF1|SSF53098
insG|insG|AP_004771.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002559|IPR012337|IPR024473	Ribonuclease H-like domain|Transposase, IS4, N-terminal|Transposase, IS4-like	GO:0003676|GO:0003677|GO:0004803|GO:0006313	PF01609|PF13006|SSF53098
insH|insH|AP_000912.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002559|IPR008490	Transposase InsH, N-terminal|Transposase, IS4-like	GO:0003677|GO:0004803|GO:0006313	PF01609|PF05598
insH|insH|AP_001198.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002559|IPR008490	Transposase InsH, N-terminal|Transposase, IS4-like	GO:0003677|GO:0004803|GO:0006313	PF01609|PF05598
insH|insH|AP_001269.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002559|IPR008490	Transposase InsH, N-terminal|Transposase, IS4-like	GO:0003677|GO:0004803|GO:0006313	PF01609|PF05598
insH|insH|AP_001305.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002559|IPR008490	Transposase InsH, N-terminal|Transposase, IS4-like	GO:0003677|GO:0004803|GO:0006313	PF01609|PF05598
insH|insH|AP_001959.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002559|IPR008490	Transposase InsH, N-terminal|Transposase, IS4-like	GO:0003677|GO:0004803|GO:0006313	PF01609|PF05598
insH|insH|AP_001997.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002559|IPR008490	Transposase InsH, N-terminal|Transposase, IS4-like	GO:0003677|GO:0004803|GO:0006313	PF01609|PF05598
insH|insH|AP_002513.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002559|IPR008490	Transposase InsH, N-terminal|Transposase, IS4-like	GO:0003677|GO:0004803|GO:0006313	PF01609|PF05598
insH|insH|AP_002595.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002559|IPR008490	Transposase InsH, N-terminal|Transposase, IS4-like	GO:0003677|GO:0004803|GO:0006313	PF01609|PF05598
insH|insH|AP_002631.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002559|IPR008490	Transposase InsH, N-terminal|Transposase, IS4-like	GO:0003677|GO:0004803|GO:0006313	PF01609|PF05598
insH|insH|AP_002691.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002559|IPR008490	Transposase InsH, N-terminal|Transposase, IS4-like	GO:0003677|GO:0004803|GO:0006313	PF01609|PF05598
insH|insH|AP_002788.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002559|IPR008490	Transposase InsH, N-terminal|Transposase, IS4-like	GO:0003677|GO:0004803|GO:0006313	PF01609|PF05598
insH|insH|AP_003537.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002559|IPR008490	Transposase InsH, N-terminal|Transposase, IS4-like	GO:0003677|GO:0004803|GO:0006313	PF01609|PF05598
insH|insH|AP_003662.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002559|IPR008490	Transposase InsH, N-terminal|Transposase, IS4-like	GO:0003677|GO:0004803|GO:0006313	PF01609|PF05598
insH|insH|AP_003760.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002559|IPR008490	Transposase InsH, N-terminal|Transposase, IS4-like	GO:0003677|GO:0004803|GO:0006313	PF01609|PF05598
insH|insH|AP_004081.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002559|IPR008490	Transposase InsH, N-terminal|Transposase, IS4-like	GO:0003677|GO:0004803|GO:0006313	PF01609|PF05598
insH|insH|AP_004084.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002559|IPR008490	Transposase InsH, N-terminal|Transposase, IS4-like	GO:0003677|GO:0004803|GO:0006313	PF01609|PF05598
insH|insH|AP_004288.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002559|IPR008490	Transposase InsH, N-terminal|Transposase, IS4-like	GO:0003677|GO:0004803|GO:0006313	PF01609|PF05598
insH|insH|AP_004585.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002559|IPR008490	Transposase InsH, N-terminal|Transposase, IS4-like	GO:0003677|GO:0004803|GO:0006313	PF01609|PF05598
insI|insI|AP_000909.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001584|IPR001598|IPR012337|IPR025246	Integrase, catalytic core|Ribonuclease H-like domain|Transposase IS30-like HTH domain|Transposase, IS30, conserved site	GO:0003676|GO:0003677|GO:0004803|GO:0006313|GO:0015074	G3DSA:3.30.420.10|PF00665|PF13936|PS01043|PS50994|PTHR10948|PTHR10948:SF15|SSF53098
insI|insI|AP_002030.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001584|IPR001598|IPR012337|IPR025246	Integrase, catalytic core|Ribonuclease H-like domain|Transposase IS30-like HTH domain|Transposase, IS30, conserved site	GO:0003676|GO:0003677|GO:0004803|GO:0006313|GO:0015074	G3DSA:3.30.420.10|PF00665|PF13936|PS01043|PS50994|PTHR10948|PTHR10948:SF15|SSF53098
insI|insI|AP_004775.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001584|IPR001598|IPR012337|IPR025246	Integrase, catalytic core|Ribonuclease H-like domain|Transposase IS30-like HTH domain|Transposase, IS30, conserved site	GO:0003676|GO:0003677|GO:0004803|GO:0006313|GO:0015074	G3DSA:3.30.420.10|PF00665|PF13936|PS01043|PS50994|PTHR10948|PTHR10948:SF15|SSF53098
insJ|insJ|AP_004236.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR009057|IPR010921	Homeodomain-like|Trp repressor/replication initiator	GO:0003677|GO:0043565	G3DSA:1.10.10.60|PF13518|SSF48295
insK|insK|AP_004235.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001584|IPR012337|IPR025948	HTH-like domain|Integrase, catalytic core|Ribonuclease H-like domain	GO:0003676|GO:0015074	G3DSA:3.30.420.10|PF00665|PF13276|PS50994|PTHR32552|PTHR32552:SF1|SSF53098
insL|insL|AP_000680.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002559|IPR012337|IPR014736	Ribonuclease H-like domain|Transposase, IS4-like|Transposase, Tn5-like, core	GO:0003676|GO:0003677|GO:0004803|GO:0006313	G3DSA:3.90.350.10|PF01609|SSF53098
insL|insL|AP_001228.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002559|IPR012337|IPR014736	Ribonuclease H-like domain|Transposase, IS4-like|Transposase, Tn5-like, core	GO:0003676|GO:0003677|GO:0004803|GO:0006313	G3DSA:3.90.350.10|PF01609|SSF53098
insL|insL|AP_002993.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002559|IPR012337|IPR014736	Ribonuclease H-like domain|Transposase, IS4-like|Transposase, Tn5-like, core	GO:0003676|GO:0003677|GO:0004803|GO:0006313	G3DSA:3.90.350.10|PF01609|SSF53098
insN|insN|AP_000908.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002514|IPR009057	Homeodomain-like|Transposase IS3/IS911family	GO:0003677|GO:0004803|GO:0006313	G3DSA:1.10.10.60|PF01527|SSF46689
insN|insN|AP_004774.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002514|IPR009057	Homeodomain-like|Transposase IS3/IS911family	GO:0003677|GO:0004803|GO:0006313	G3DSA:1.10.10.60|PF01527|SSF46689
insO|insO|AP_000910.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR025948	HTH-like domain		PF13276|PTHR32552|PTHR32552:SF1
intA|intA|AP_003201.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002104|IPR011010|IPR013762|IPR023109|IPR025166	DNA breaking-rejoining enzyme, catalytic core|Domain of unknown function DUF4102|Integrase, catalytic|Integrase-like, catalytic core|Integrase/recombinase, N-terminal	GO:0003677|GO:0006310|GO:0015074	G3DSA:1.10.150.130|G3DSA:1.10.443.10|PF00589|PF13356|PTHR30629|PTHR30629:SF0|SSF56349
intB|intB|AP_004766.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002104|IPR011010|IPR013762|IPR023109|IPR025166	DNA breaking-rejoining enzyme, catalytic core|Domain of unknown function DUF4102|Integrase, catalytic|Integrase-like, catalytic core|Integrase/recombinase, N-terminal	GO:0003677|GO:0006310|GO:0015074	G3DSA:1.10.150.130|G3DSA:1.10.443.10|PF00589|PF13356|PTHR30629|PTHR30629:SF0|SSF56349
intD|intD|AP_001183.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002104|IPR011010|IPR013762	DNA breaking-rejoining enzyme, catalytic core|Integrase, catalytic|Integrase-like, catalytic core	GO:0003677|GO:0006310|GO:0015074	G3DSA:1.10.443.10|PF00589|SSF56349
intE|intE|AP_001766.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002104|IPR011010|IPR013087|IPR013762|IPR015094|IPR016177|IPR023109	DNA breaking-rejoining enzyme, catalytic core|DNA-binding, integrase-type|Integrase, catalytic|Integrase, lambda-type, N-terminal DNA-binding|Integrase-like, catalytic core|Integrase/recombinase, N-terminal|Zinc finger C2H2-type/integrase DNA-binding domain	GO:0003676|GO:0003677|GO:0006310|GO:0008907|GO:0015074	G3DSA:1.10.150.130|G3DSA:1.10.443.10|G3DSA:3.30.160.60|PF00589|PF09003|SSF54171|SSF56349
intF|intF|AP_000935.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002104|IPR011010|IPR013762|IPR025166	DNA breaking-rejoining enzyme, catalytic core|Domain of unknown function DUF4102|Integrase, catalytic|Integrase-like, catalytic core	GO:0003677|GO:0006310|GO:0015074	G3DSA:1.10.443.10|PF00589|PF13356|SSF56349
intQ|intQ|AP_002200.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002104|IPR011010|IPR013762|IPR022000|IPR023109	Bacteriophage P27, p02, N-terminal|DNA breaking-rejoining enzyme, catalytic core|Integrase, catalytic|Integrase-like, catalytic core|Integrase/recombinase, N-terminal	GO:0003677|GO:0006310|GO:0015074	G3DSA:1.10.150.130|G3DSA:1.10.443.10|PF00589|PF12167|SSF56349
intR|intR|AP_001973.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002104|IPR011010|IPR013762|IPR022000|IPR023109	Bacteriophage P27, p02, N-terminal|DNA breaking-rejoining enzyme, catalytic core|Integrase, catalytic|Integrase-like, catalytic core|Integrase/recombinase, N-terminal	GO:0003677|GO:0006310|GO:0015074	G3DSA:1.10.150.130|G3DSA:1.10.443.10|PF00589|PF12167|SSF56349
intS|intS|AP_002948.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002104|IPR011010|IPR013762|IPR023109|IPR025166	DNA breaking-rejoining enzyme, catalytic core|Domain of unknown function DUF4102|Integrase, catalytic|Integrase-like, catalytic core|Integrase/recombinase, N-terminal	GO:0003677|GO:0006310|GO:0015074	G3DSA:1.10.150.130|G3DSA:1.10.443.10|PF00589|PF13356|PTHR30629|PTHR30629:SF0|SSF56349
iscA|iscA|AP_003114.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000361|IPR011302|IPR016092|IPR017870	FeS cluster biogenesis|FeS cluster insertion protein|FeS cluster insertion, C-terminal, conserved site|ISC system FeS cluster assembly, IscA scaffold	GO:0005198|GO:0005506|GO:0016226|GO:0051536	G3DSA:2.60.300.12|MF_01429|PF01521|PS01152|PTHR10072|PTHR10072:SF34|SSF89360|TIGR00049|TIGR02011
iscR|iscR|AP_003117.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000944|IPR010242|IPR011991	Transcription factor HTH,  IscR|Transcription regulator Rrf2-like|Winged helix-turn-helix DNA-binding domain	GO:0003690|GO:0003700|GO:0006355	G3DSA:1.10.10.10|MF_01176|PF02082|PS01332|PS51197|SSF46785|TIGR00738|TIGR02010
iscS|iscS|AP_003116.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000192|IPR010240|IPR015421|IPR015422|IPR015424|IPR016454|IPR020578	Aminotransferase class-V pyridoxal-phosphate binding site|Aminotransferase, class V/Cysteine desulfurase|Cysteine desulfurase|Cysteine desulfurase, NifS|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2	GO:0003824|GO:0006534|GO:0008152|GO:0030170|GO:0031071	G3DSA:3.40.640.10|G3DSA:3.90.1150.10|MF_00331|PF00266|PIRSF005572|PS00595|PTHR11601|PTHR11601:SF13|SSF53383|TIGR02006
iscU|iscU|AP_003115.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002871|IPR011339	ISC system FeS cluster assembly, IscU scaffold|NIF system FeS cluster assembly, NifU, N-terminal	GO:0005506|GO:0016226|GO:0051536	G3DSA:3.90.1010.10|PF01592|PTHR10093|PTHR10093:SF0|SSF82649|TIGR01999
ispA|ispA|AP_001071.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000092|IPR008949|IPR017446	Polyprenyl synthetase|Polyprenyl synthetase-related|Terpenoid synthase	GO:0008299	G3DSA:1.10.600.10|PF00348|PS00444|PS00723|PTHR12001|PTHR12001:SF23|SSF48576
ispB|ispB|AP_003730.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000092|IPR008949|IPR017446	Polyprenyl synthetase|Polyprenyl synthetase-related|Terpenoid synthase	GO:0008299	G3DSA:1.10.600.10|PF00348|PS00444|PS00723|PTHR12001|PTHR12001:SF32|SSF48576
ispD|ispD|AP_003314.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001228|IPR018294	4-diphosphocytidyl-2C-methyl-D-erythritol synthase|4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site	GO:0003824|GO:0008299	G3DSA:3.90.550.10|MF_00108|PF01128|PS01295|PTHR32125|PTHR32125:SF0|SSF53448|TIGR00453
ispE|ispE|AP_001833.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004424|IPR006204|IPR013750|IPR014721|IPR020568	4-diphosphocytidyl-2C-methyl-D-erythritol kinase|GHMP kinase N-terminal domain|GHMP kinase, C-terminal domain|Ribosomal protein S5 domain 2-type fold|Ribosomal protein S5 domain 2-type fold, subgroup	GO:0005524|GO:0016114|GO:0050515	G3DSA:3.30.230.10|G3DSA:3.30.70.890|MF_00061|PF00288|PF08544|PIRSF010376|PTHR20861|PTHR20861:SF2|SSF54211|SSF55060|TIGR00154
ispF|ispF|AP_003313.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003526|IPR020555	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase|2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site	GO:0008685|GO:0016114	G3DSA:3.30.1330.50|MF_00107|PF02542|PS01350|PTHR32125|PTHR32125:SF0|SSF69765|TIGR00151
ispG|ispG|AP_003101.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004588|IPR011005|IPR013785|IPR016425	4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial|4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type|Aldolase-type TIM barrel|Dihydropteroate synthase-like	GO:0003824|GO:0005506|GO:0008299|GO:0016114|GO:0044237|GO:0046429|GO:0055114	G3DSA:3.20.20.70|MF_00159|PF04551|PIRSF004640|PTHR30454|SSF51717|SSF56014|TIGR00612
ispH|ispH|AP_000693.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003451	LytB protein	GO:0019288|GO:0055114	MF_00191|PF02401|PTHR30426|TIGR00216
ispU|ispU|AP_000834.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001441|IPR018520	Decaprenyl diphosphate synthase-like|Di-trans-poly-cis-decaprenylcistransferase-like, conserved site	GO:0016765	G3DSA:3.40.1180.10|MF_01139|PF01255|PS01066|PTHR10291|SSF64005|TIGR00055
ivbL|ivbL|AP_004120.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR012566	IlvB leader peptide		PF08049
ivy|ivy|AP_000875.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR014453	Inhibitor of vertebrate lysozyme	GO:0042597|GO:0043086	G3DSA:3.40.1420.10|PF08816|PIRSF009103|SSF89872
katE|katE|AP_002351.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002226|IPR010582|IPR011614|IPR018028|IPR020835|IPR024708|IPR024712	Catalase active site|Catalase core domain|Catalase haem-binding site|Catalase immune-responsive domain|Catalase, mono-functional, haem-containing|Catalase, mono-functional, haem-containing, clade 2|Catalase-like domain	GO:0004096|GO:0006979|GO:0020037|GO:0055114	G3DSA:2.40.180.10|G3DSA:3.40.50.880|PF00199|PF06628|PIRSF038927|PR00067|PS00437|PS00438|PS51402|PTHR11465|PTHR11465:SF0|SM01060|SSF52317|SSF56634
katG|katG|AP_003867.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000763|IPR002016|IPR010255|IPR019793|IPR019794	Catalase-peroxidase haem|Haem peroxidase|Haem peroxidase, plant/fungal/bacterial|Peroxidase, active site|Peroxidases heam-ligand binding site	GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114	G3DSA:1.10.420.10|G3DSA:1.10.520.10|MF_01961|PF00141|PR00458|PR00460|PS00435|PS00436|PS50873|PTHR30555|PTHR30555:SF0|SSF48113|TIGR00198
kbaY|kbaY|AP_003682.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000771|IPR011288|IPR013785|IPR023788	Aldolase-type TIM barrel|D-tagatose-bisphosphate aldolase, class II, subunit KbaY|D-tagatose-bisphosphate aldolase, class II, subunit KbaY/GatY|Ketose-bisphosphate aldolase, class-II	GO:0003824|GO:0005975|GO:0008270|GO:0009025|GO:0016832|GO:2001059	G3DSA:3.20.20.70|MF_01293|PF01116|PIRSF001359|PS00602|PS00806|PTHR30304|SSF51569|TIGR00167|TIGR01858
kbaZ|kbaZ|AP_003678.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR012062|IPR013785|IPR023435	Aldolase-type TIM barrel|D-tagatose-bisphosphate aldolase, class II, non-catalytic subunit  GatZ/KbaZ|D-tagatose-bisphosphate aldolase, class II, non-catalytic subunit KbaZ	GO:0003824|GO:0019402	G3DSA:1.10.400.20|G3DSA:3.20.20.70|MF_01295|PF08013|PIRSF009264|PTHR32502|PTHR32502:SF0|SSF51569|TIGR02810
kbl|kbl|AP_004174.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004839|IPR011282|IPR015421|IPR015422|IPR015424	2-amino-3-ketobutyrate coenzyme A ligase|Aminotransferase, class I/classII|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2	GO:0003824|GO:0008890|GO:0009058|GO:0030170	G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF00155|PTHR13693|PTHR13693:SF30|SSF53383|TIGR01822
kch|kch|AP_001876.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003148|IPR013099|IPR016040	Ion transport 2|NAD(P)-binding domain|Regulator of K+ conductance, N-terminal	GO:0006813	G3DSA:1.10.287.70|G3DSA:3.40.50.720|PF02254|PF07885|PS51201|SSF51735|SSF81324
kdgK|kdgK|AP_004267.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002173|IPR011611	Carbohydrate kinase PfkB|Carbohydrate/puine kinase, PfkB, conserved site	GO:0016773	G3DSA:3.40.1190.20|PF00294|PS00584|PTHR10584|PTHR10584:SF57|SSF53613
kdgR|kdgR|AP_002447.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR005471|IPR011991|IPR014757	Transcription regulator IclR, C-terminal|Transcription regulator IclR, N-terminal|Winged helix-turn-helix DNA-binding domain	GO:0003677|GO:0006355	G3DSA:1.10.10.10|G3DSA:3.30.450.40|PF01614|PF09339|PTHR30136|PTHR30136:SF0|SM00346|SSF46785|SSF55781
kdgT|kdgT|AP_003899.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004684|IPR018395	2-keto-3-deoxygluconate permease|2-keto-3-deoxygluconate permease, subgroup	GO:0008643|GO:0015649|GO:0016021|GO:0046411	MF_00070|PD024513|PF03812|TIGR00793
kdpA|kdpA|AP_001336.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004623	ATPase, K+ transporting, A subunit	GO:0005886|GO:0006813|GO:0008556	MF_00275|PF03814|PIRSF001294|PTHR30607|PTHR30607:SF0|TIGR00680
kdpB|kdpB|AP_001335.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001757|IPR006391|IPR008250|IPR018303|IPR023214|IPR023299	Cation-transporting P-type ATPase|HAD-like domain|P-type ATPase, A  domain|P-type ATPase, cytoplasmic domain N|P-type ATPase, phosphorylation site|Potassium-transporting P-type ATPase, B chain, subfamily IA	GO:0000166|GO:0005524|GO:0006812|GO:0006813|GO:0008556|GO:0016021|GO:0019829|GO:0046872	G3DSA:2.70.150.10|G3DSA:3.40.1110.10|G3DSA:3.40.50.1000|MF_00285|PF00122|PF00702|PR00119|PS00154|PTHR24093|PTHR24093:SF49|SSF56784|SSF81653|SSF81660|SSF81665|TIGR01494|TIGR01497
kdpC|kdpC|AP_001334.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003820	Potassium transporting ATPase, C subunit	GO:0006813|GO:0008556|GO:0016020	MF_00276|PF02669|PIRSF001296|PTHR30042|PTHR30042:SF0|TIGR00681
kdpD|kdpD|AP_001333.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003018|IPR003594|IPR003661|IPR003852|IPR004358|IPR005467|IPR006016|IPR009082|IPR014729|IPR025201	Domain of unknown function DUF4118|GAF domain|Histidine kinase-like ATPase, ATP-binding domain|Rossmann-like alpha/beta/alpha sandwich fold|Signal transduction histidine kinase, core|Signal transduction histidine kinase, homodimeric domain|Signal transduction histidine kinase, osmosensitive K+ channel sensor, N-terminal|Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal|UspA	GO:0000155|GO:0000160|GO:0004673|GO:0004871|GO:0005515|GO:0005524|GO:0006950|GO:0007165|GO:0016020|GO:0016310|GO:0016772	G3DSA:1.10.287.130|G3DSA:1.20.120.620|G3DSA:3.30.565.10|G3DSA:3.40.50.300|G3DSA:3.40.50.620|PF00512|PF00582|PF02518|PF02702|PF13492|PF13493|PR00344|PS50109|PTHR24423|PTHR24423:SF357|SM00387|SM00388|SSF47384|SSF52402|SSF55874
kdpE|kdpE|AP_001332.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001789|IPR001867|IPR011006|IPR011991	CheY-like superfamily|Signal transduction response regulator, C-terminal|Signal transduction response regulator, receiver domain|Winged helix-turn-helix DNA-binding domain	GO:0000156|GO:0000160|GO:0003677|GO:0006355	G3DSA:1.10.10.10|G3DSA:3.40.50.2300|PF00072|PF00486|PS50110|PTHR26402|PTHR26402:SF259|SM00448|SM00862|SSF52172
kdpF|kdpF|AP_001337.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR011726	K+ transporting P-type ATPase, F subunit	GO:0005886|GO:0008556|GO:0043462	PF09604|TIGR02115
kdsA|kdsA|AP_001840.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR006218|IPR006269|IPR013785	3-deoxy-8-phosphooctulonate synthase|Aldolase-type TIM barrel|DAHP synthetase I/KDSA	GO:0003824|GO:0005737|GO:0008152|GO:0008676|GO:0009058	G3DSA:3.20.20.70|MF_00056|PF00793|PTHR21057|PTHR21057:SF2|SSF51569|TIGR01362
kdsB|kdsB|AP_001548.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003329|IPR004528	3-deoxy-D-manno-octulosonate cytidylyltransferase|Acylneuraminate cytidylyltransferase	GO:0005737|GO:0008690|GO:0009103	G3DSA:3.90.550.10|MF_00057|PF02348|PTHR21485|PTHR21485:SF4|SSF53448|TIGR00466
kdsC|kdsC|AP_003741.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR010023|IPR023214	3-deoxy-D-manno-octulosonate 8-phosphate phosphatase|HAD-like domain	GO:0009103|GO:0019143	G3DSA:3.40.50.1000|PF08282|PIRSF006118|PTHR26053|SSF56784|TIGR01670
kdsD|kdsD|AP_003740.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000644|IPR001347|IPR004800	Cystathionine beta-synthase, core|Phosphosugar isomerase, KdsD/KpsF-type|Sugar isomerase (SIS)	GO:0005515|GO:0005975|GO:0016853|GO:0030246	G3DSA:3.10.580.10|G3DSA:3.40.50.10490|PF00571|PF01380|PIRSF004692|PS51371|PS51464|PTHR30550|PTHR30550:SF0|SM00116|SSF53697|TIGR00393
kdtA|kdtA|AP_004158.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001296|IPR007507	3-deoxy-D-manno-octulosonic-acid transferase, N-terminal|Glycosyl transferase, family 1	GO:0009058	PF00534|PF04413|PTHR23417|PTHR23417:SF2|SSF53756
kduD|kduD|AP_003405.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002198|IPR002347|IPR011286|IPR016040|IPR020904	2-deoxy-D-gluconate 3-dehydrogenase|Glucose/ribitol dehydrogenase|NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR|Short-chain dehydrogenase/reductase, conserved site	GO:0008152|GO:0008678|GO:0016491|GO:0051287|GO:0055114	G3DSA:3.40.50.720|PF00106|PR00080|PR00081|PS00061|PTHR24316|PTHR24316:SF67|SSF51735|TIGR01832
kduI|kduI|AP_003406.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR007045|IPR011051|IPR021120|IPR027447|IPR027449	5-keto 4-deoxyuronate isomerase|5-keto-4-deoxyuronate isomerase, C-terminal domain|5-keto-4-deoxyuronate isomerase, N-terminal domain|KduI/IolB isomerase|RmlC-like cupin domain	GO:0008152|GO:0008697|GO:0016861|GO:0045490	G3DSA:2.60.120.500|G3DSA:2.60.120.520|MF_00687|PF04962|PIRSF006625|PTHR30025|PTHR30025:SF0|SSF51182
kefA|kefA|AP_001114.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR006685|IPR006686|IPR010920|IPR011014|IPR011066|IPR025692	Like-Sm (LSM) domain|Mechanosensitive ion channel MscS|Mechanosensitive ion channel MscS, C-terminal|Mechanosensitive ion channel MscS, conserved site|Mechanosensitive ion channel MscS, transmembrane-2|Mechanosensitive ion channel inner membrane domain 1	GO:0016020|GO:0055085	G3DSA:2.30.30.60|G3DSA:3.30.70.100|PF00924|PF12794|PF12795|PS01246|PTHR30347|PTHR30347:SF1|SSF50182|SSF81665|SSF82689|SSF82861
kefB|kefB|AP_004439.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003148|IPR004771|IPR006153|IPR016040|IPR020884	Cation/H+ exchanger|Glutathione-regulated potassium-efflux system protein KefB|K+/H+ exchanger|NAD(P)-binding domain|Regulator of K+ conductance, N-terminal	GO:0005886|GO:0006812|GO:0006813|GO:0008324|GO:0015299|GO:0015503|GO:0016021|GO:0055085	G3DSA:3.40.50.720|MF_01412|PF00999|PF02254|PS51201|PTHR16254|SSF51735|TIGR00932
kefC|kefC|AP_000711.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003148|IPR004771|IPR006036|IPR006153|IPR016040	Cation/H+ exchanger|K+/H+ exchanger|NAD(P)-binding domain|Potassium uptake protein TrkA|Regulator of K+ conductance, N-terminal	GO:0005886|GO:0006812|GO:0006813|GO:0008324|GO:0015079|GO:0015299|GO:0016021|GO:0055085	G3DSA:3.40.50.720|PF00999|PF02254|PR00335|PTHR16254|SSF51735|TIGR00932
kefF|kefF|AP_000710.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003680|IPR023948	Flavodoxin-like fold|Glutathione-regulated potassium-efflux system ancillary protein KefF	GO:0006813	G3DSA:3.40.50.360|MF_01414|PF02525|PTHR32048|SSF52218
kefG|kefG|AP_004438.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003680|IPR023947	Flavodoxin-like fold|Glutathione-regulated potassium-efflux system ancillary protein KefG	GO:0006813	G3DSA:3.40.50.360|MF_01415|PF02525|PTHR32048|SSF52218
kgtP|kgtP|AP_003173.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004736|IPR005828|IPR005829|IPR016196|IPR020846	Citrate-proton symport|General substrate transporter|Major facilitator superfamily domain|Major facilitator superfamily domain, general substrate transporter|Sugar transporter, conserved site	GO:0005215|GO:0006810|GO:0016020|GO:0016021|GO:0022857|GO:0055085	G3DSA:1.20.1250.20|PF00083|PS00216|PS00217|PS50850|PTHR24063|SSF103473|TIGR00883
kptA|kptA|AP_004823.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002745|IPR022928	2'-phosphotransferase KptA, putative|Phosphotransferase KptA/Tpt1	GO:0006388|GO:0016772|GO:0016773	MF_00299|PF01885|PTHR12684|PTHR12684:SF2|SSF56399
ksgA|ksgA|AP_000715.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001737|IPR011530|IPR020596|IPR020598|IPR023165	Ribosomal RNA adenine dimethylase|Ribosomal RNA adenine methylase transferase|Ribosomal RNA adenine methylase transferase, N-terminal|Ribosomal RNA adenine methylase transferase, conserved site|rRNA adenine dimethylase-like	GO:0000154|GO:0000179|GO:0006364|GO:0008649|GO:0016433	G3DSA:1.10.8.100|G3DSA:3.40.50.150|MF_00607|PF00398|PS01131|PTHR11727|PTHR11727:SF7|SM00650|SSF53335|TIGR00755
lacA|lacA|AP_000994.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001451|IPR011004|IPR018357|IPR024688	Bacterial transferase hexapeptide repeat|Hexapeptide transferase, conserved site|Maltose/galactoside acetyltransferase|Trimeric LpxA-like	GO:0016407|GO:0016740	G3DSA:2.160.10.10|PF00132|PF12464|PS00101|PTHR23416|PTHR23416:SF7|SSF51161
lacI|lacI|AP_000997.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000843|IPR010982|IPR026908	Lactose operon repressor|Lambda repressor-like, DNA-binding domain|Transcription regulator HTH, LacI	GO:0003677|GO:0003700|GO:0005622|GO:0006355	G3DSA:1.10.260.40|G3DSA:3.40.50.2300|PF00356|PF13377|PR00036|PS00356|PS50932|PTHR30146|PTHR30146:SF1|SM00354|SSF47413|SSF53822
lacY|lacY|AP_000995.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000576|IPR016196|IPR018457|IPR020846	LacY/RafB permease family|LacY/RafB permease family, conserved site|Major facilitator superfamily domain|Major facilitator superfamily domain, general substrate transporter	GO:0006810|GO:0016020	G3DSA:1.20.1250.20|PF01306|PR00174|PS00896|PS00897|PS50850|PTHR24003|PTHR24003:SF271|SSF103473|TIGR00882
lacZ|lacZ|AP_000996.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004199|IPR006101|IPR006102|IPR006103|IPR006104|IPR008979|IPR011013|IPR013781|IPR013812|IPR014718|IPR017853|IPR023230|IPR023232|IPR023933	Beta galactosidase small chain/ domain 5|Galactose mutarotase-like domain|Galactose-binding domain-like|Glycoside hydrolase, catalytic domain|Glycoside hydrolase, family 2|Glycoside hydrolase, family 2, N-terminal|Glycoside hydrolase, family 2, TIM barrel|Glycoside hydrolase, family 2, active site|Glycoside hydrolase, family 2, beta-galactosidase|Glycoside hydrolase, family 2, conserved site|Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich|Glycoside hydrolase, family 2/20, immunoglobulin-like beta-sandwich domain|Glycoside hydrolase, superfamily|Glycoside hydrolase-type carbohydrate-binding, subgroup	GO:0003824|GO:0004553|GO:0004565|GO:0005975|GO:0009341|GO:0016798|GO:0030246	G3DSA:2.60.120.260|G3DSA:2.60.40.320|G3DSA:2.70.98.10|G3DSA:3.20.20.80|MF_01687|PF00703|PF02836|PF02837|PF02929|PR00132|PS00608|PS00719|PTHR10066|PTHR10066:SF41|SM01038|SSF49303|SSF49785|SSF51445|SSF74650
lamB|lamB|AP_004537.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003192|IPR023738	Maltoporin|Porin, LamB type	GO:0006810|GO:0009279|GO:0015481|GO:0015768|GO:0016020|GO:0042956|GO:0042958	G3DSA:2.40.170.10|MF_01301|PD008788|PF02264|SSF56935
lar|lar|AP_001976.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR019908	Restriction alleviation protein, Lar		PF14354|TIGR03655
ldcA|ldcA|AP_001817.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003507|IPR027461|IPR027478	LD-carboxypeptidase A, C-terminal domain|Muramoyl-tetrapeptide carboxypeptidase|Murein tetrapeptide carboxypeptidase, N-terminal domain		G3DSA:3.40.50.10740|G3DSA:3.50.30.60|PF02016|PIRSF028757|PTHR30237|PTHR30237:SF0|SSF141986|SSF52317
ldcC|ldcC|AP_000846.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000310|IPR005308|IPR008286|IPR011193|IPR015421|IPR015422|IPR015424	Orn/Lys/Arg decarboxylase, C-terminal|Orn/Lys/Arg decarboxylase, N-terminal|Orn/Lys/Arg decarboxylase, major domain|Ornithine/lysine/arginine decarboxylase|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2	GO:0003824|GO:0005737|GO:0006520|GO:0016831|GO:0030170	G3DSA:3.40.640.10|G3DSA:3.90.100.10|G3DSA:3.90.1150.10|PF01276|PF03709|PF03711|PIRSF009393|PS00703|PTHR30475|PTHR30475:SF0|SSF53383|SSF55904
ldhA|ldhA|AP_002007.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR006139|IPR006140|IPR016040	D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding|D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain|NAD(P)-binding domain	GO:0008152|GO:0016616|GO:0048037|GO:0051287|GO:0055114	G3DSA:3.40.50.720|PF00389|PF02826|PTHR10996|PTHR10996:SF17|SSF51735|SSF52283
ldrA|ldrA|AP_001841.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR025253	Type I toxin-antitoxin system, toxin Ldr		PF13940
ldrB|ldrB|AP_001842.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR025253	Type I toxin-antitoxin system, toxin Ldr		PF13940
ldrC|ldrC|AP_001843.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR025253	Type I toxin-antitoxin system, toxin Ldr		PF13940
ldrD|ldrD|AP_004255.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR025253	Type I toxin-antitoxin system, toxin Ldr		PF13940
lepA|lepA|AP_003155.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000640|IPR000795|IPR004161|IPR005225|IPR006297|IPR009022|IPR013842|IPR027417	Elongation factor 4|Elongation factor G, III-V domain|Elongation factor, GTP-binding domain|GTP-binding protein LepA, C-terminal|P-loop containing nucleoside triphosphate hydrolase|Small GTP-binding protein domain|Translation elongation factor EFG, V domain|Translation elongation factor EFTu/EF1A, domain 2	GO:0003924|GO:0005525	G3DSA:2.40.30.10|G3DSA:3.30.70.240|G3DSA:3.30.70.870|G3DSA:3.40.50.300|MF_00071|PF00009|PF00679|PF03144|PF06421|PR00315|PS00301|PTHR23115|PTHR23115:SF40|SM00838|SSF52540|SSF54980|TIGR00231|TIGR01393
lepB|lepB|AP_003154.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000223|IPR011056|IPR015927|IPR019533|IPR019756|IPR019757|IPR019758|IPR019759|IPR019766	Peptidase S24/S26A/S26B|Peptidase S24/S26A/S26B/S26C|Peptidase S24/S26A/S26B/S26C, beta-ribbon domain|Peptidase S26|Peptidase S26A, all-beta subdomain|Peptidase S26A, signal peptidase I|Peptidase S26A, signal peptidase I, conserved site|Peptidase S26A, signal peptidase I, lysine active site|Peptidase S26A, signal peptidase I, serine active site	GO:0006508|GO:0008236|GO:0016020|GO:0016021	G3DSA:2.10.109.10|G3DSA:2.170.230.10|PF00717|PF10502|PR00727|PS00501|PS00760|PS00761|PTHR12383|PTHR12383:SF1|SSF51306|TIGR02227
leuA|leuA|AP_000738.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000891|IPR002034|IPR005671|IPR013709|IPR013785	2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain|2-isopropylmalate synthase, bacterial-type|Aldolase-type TIM barrel|Alpha-isopropylmalate/homocitrate synthase, conserved site|Pyruvate carboxyltransferase	GO:0003824|GO:0003852|GO:0009098|GO:0019752|GO:0046912	G3DSA:3.20.20.70|MF_01025|PF00682|PF08502|PS00815|PS00816|PS50991|PTHR10277|PTHR10277:SF9|SM00917|SSF110921|SSF51569|TIGR00973
leuB|leuB|AP_000737.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001804|IPR004429|IPR019818|IPR024084	Isocitrate and isopropylmalate dehydrogenases family|Isocitrate/isopropylmalate dehydrogenase, conserved site|Isopropylmalate dehydrogenase|Isopropylmalate dehydrogenase-like domain	GO:0000287|GO:0003862|GO:0005737|GO:0009098|GO:0016616|GO:0051287|GO:0055114	G3DSA:3.40.718.10|MF_01033|PF00180|PS00470|PTHR11835|PTHR11835:SF1|SSF53659|TIGR00169
leuC|leuC|AP_000736.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001030|IPR004430|IPR015931|IPR015932|IPR015937|IPR018136	3-isopropylmalate dehydratase, large subunit|Aconitase family, 4Fe-4S cluster binding site|Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha|Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3|Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2|Aconitase/isopropylmalate dehydratase	GO:0003861|GO:0008152|GO:0009098|GO:0051539	G3DSA:3.30.499.10|G3DSA:3.40.1060.10|MF_01026|PF00330|PR00415|PS00450|PS01244|PTHR11670|PTHR11670:SF12|SSF53732|TIGR00170
leuD|leuD|AP_000735.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000573|IPR004431|IPR015928|IPR015937	3-isopropylmalate dehydratase, small subunit|Aconitase A/isopropylmalate dehydratase small subunit, swivel|Aconitase/3-isopropylmalate dehydratase, swivel|Aconitase/isopropylmalate dehydratase	GO:0003861|GO:0008152|GO:0009098|GO:0009316	G3DSA:3.20.19.10|MF_01031|PF00694|PTHR11670|PTHR11670:SF2|SSF52016|TIGR00171
leuL|leuL|AP_000739.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR012570	Leucine operon leader peptide	GO:0009098	PF08054
leuO|leuO|AP_000740.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000847|IPR005119|IPR011991	LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain	GO:0003700|GO:0006355	G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PR00039|PS50931|PTHR30118|SSF46785|SSF53850
leuS|leuS|AP_001291.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001412|IPR002300|IPR002302|IPR009008|IPR009080|IPR013155|IPR014729|IPR025709	Aminoacyl-tRNA synthetase, class 1a, anticodon-binding|Aminoacyl-tRNA synthetase, class I, conserved site|Aminoacyl-tRNA synthetase, class Ia|Leucine-tRNA ligase, bacterial/mitochondrial|Leucyl-tRNA synthetase, editing domain|Rossmann-like alpha/beta/alpha sandwich fold|Valyl/Leucyl/Isoleucyl-tRNA synthetase, class I, anticodon-binding|Valyl/Leucyl/Isoleucyl-tRNA synthetase, class Ia, editing domain	GO:0000166|GO:0002161|GO:0004812|GO:0004823|GO:0005524|GO:0005737|GO:0006418|GO:0006429	G3DSA:1.10.730.10|G3DSA:3.40.50.620|G3DSA:3.90.740.10|MF_00049_B|PF00133|PF08264|PF13603|PR00985|PS00178|PTHR11946|PTHR11946:SF7|SSF47323|SSF50677|SSF52374|TIGR00396
lexA|lexA|AP_004544.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR006197|IPR006199|IPR006200|IPR011056|IPR011991|IPR015927|IPR019759	LexA repressor, DNA-binding domain|Peptidase S24, LexA repressor|Peptidase S24, LexA-like|Peptidase S24/S26A/S26B|Peptidase S24/S26A/S26B/S26C|Peptidase S24/S26A/S26B/S26C, beta-ribbon domain|Winged helix-turn-helix DNA-binding domain	GO:0003677|GO:0004252|GO:0006355|GO:0006508	G3DSA:1.10.10.10|G3DSA:2.10.109.10|PF00717|PF01726|PR00726|SSF46785|SSF51306|TIGR00498
lgt|lgt|AP_003391.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001640	Prolipoprotein diacylglyceryl transferase	GO:0009249|GO:0016020|GO:0016757|GO:0042158	MF_01147|PF01790|PS01311|PTHR30589|PTHR30589:SF0|TIGR00544
lhr|lhr|AP_002275.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001650|IPR003593|IPR011545|IPR013701|IPR014001|IPR027417	AAA+ ATPase domain|DEAD/H associated|DNA/RNA helicase, DEAD/DEAH box type, N-terminal|Helicase, C-terminal|Helicase, superfamily 1/2, ATP-binding domain|P-loop containing nucleoside triphosphate hydrolase	GO:0000166|GO:0003676|GO:0004386|GO:0005524|GO:0008026|GO:0016818|GO:0017111	G3DSA:3.40.50.300|PF00270|PF00271|PF08494|PTHR11752|PTHR11752:SF31|SM00382|SM00487|SM00490|SSF52540
ligA|ligA|AP_003005.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001357|IPR001679|IPR003583|IPR004149|IPR004150|IPR010994|IPR012340|IPR013839|IPR013840|IPR018239	BRCT domain|Helix-hairpin-helix DNA-binding motif, class 1|NAD-dependent DNA ligase|NAD-dependent DNA ligase, N-terminal|NAD-dependent DNA ligase, OB-fold|NAD-dependent DNA ligase, active site|NAD-dependent DNA ligase, adenylation|Nucleic acid-binding, OB-fold|RuvA domain 2-like|Zinc-finger, NAD-dependent DNA ligase C4-type	GO:0003677|GO:0003911|GO:0006260|GO:0006281	G3DSA:1.10.150.20|G3DSA:1.10.287.610|G3DSA:2.40.50.140|G3DSA:3.30.470.30|G3DSA:3.40.50.10190|MF_01588|PF00533|PF01653|PF03119|PF03120|PF12826|PIRSF001604|PS01055|PS01056|PS50172|PTHR11107|PTHR11107:SF5|SM00278|SM00292|SM00532|SSF47781|SSF50249|SSF52113|SSF56091|TIGR00575
ligB|ligB|AP_004145.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004150|IPR010994|IPR012340|IPR013839|IPR013840|IPR018239|IPR020923	DNA ligase B|NAD-dependent DNA ligase, N-terminal|NAD-dependent DNA ligase, OB-fold|NAD-dependent DNA ligase, active site|NAD-dependent DNA ligase, adenylation|Nucleic acid-binding, OB-fold|RuvA domain 2-like	GO:0003911|GO:0006259|GO:0006260|GO:0006281	G3DSA:1.10.287.610|G3DSA:2.40.50.140|G3DSA:3.30.470.30|MF_01587|PF01653|PF03120|PS01055|PS01056|PTHR11107|PTHR11107:SF2|SM00532|SSF47781|SSF50249|SSF56091
ligT|ligT|AP_000808.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004175|IPR009097|IPR014051	2',5' RNA ligase|Phosphoesterase, HXTX|RNA ligase/cyclic nucleotide phosphodiesterase	GO:0003824|GO:0005622|GO:0008664|GO:0016070	G3DSA:3.90.1140.10|PF02834|SSF55144|TIGR02258
lipA|lipA|AP_001277.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003698|IPR006638|IPR007197|IPR013785	Aldolase-type TIM barrel|Elongator protein 3/MiaB/NifB|Lipoyl synthase|Radical SAM	GO:0003824|GO:0009107|GO:0016992|GO:0051536|GO:0051539	G3DSA:3.20.20.70|MF_00206|PF04055|PIRSF005963|PTHR10949|SM00729|SSF102114|TIGR00510
lipB|lipB|AP_001279.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000544|IPR004143|IPR020605	Biotin/lipoate A/B protein ligase|Octanoyltransferase|Octanoyltransferase, conserved site	GO:0003824|GO:0005737|GO:0006464|GO:0009107|GO:0016415	G3DSA:3.90.1550.10|MF_00013|PD006086|PF03099|PIRSF016262|PS01313|PTHR10993|PTHR10993:SF0|SSF55681|TIGR00214
lit|lit|AP_001765.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR019504	Peptidase U49, Lit peptidase		PF10463
livF|livF|AP_004338.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003439|IPR003593|IPR017871|IPR027417	AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase	GO:0000166|GO:0005524|GO:0016887|GO:0017111	G3DSA:3.40.50.300|PF00005|PS00211|PS50893|PTHR24220|PTHR24220:SF33|SM00382|SSF52540
livG|livG|AP_004337.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003439|IPR003593|IPR017871|IPR027417	AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase	GO:0000166|GO:0005524|GO:0016887|GO:0017111	G3DSA:3.40.50.300|PF00005|PF12399|PS00211|PS50893|PTHR24220|PTHR24220:SF167|SM00382|SSF52540
livH|livH|AP_004335.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001851	ABC transporter, permease	GO:0005215|GO:0006810|GO:0016020	PF02653|PTHR30145|PTHR30145:SF0
livJ|livJ|AP_004332.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000709	Leu/Ile/Val-binding protein	GO:0006865|GO:0030288	G3DSA:3.40.50.2300|PF13458|PR00337|PTHR30483|PTHR30483:SF0|SSF53822
livK|livK|AP_004334.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000709	Leu/Ile/Val-binding protein	GO:0006865|GO:0030288	G3DSA:3.40.50.2300|PF13458|PR00337|PTHR30483|PTHR30483:SF0|SSF53822
livM|livM|AP_004336.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001851|IPR021807	ABC transporter, permease|High-affinity branched-chain amino acid transport system permease, LivHM, N-terminal	GO:0005215|GO:0006810|GO:0016020	PF02653|PF11862|PTHR30482|PTHR30482:SF0
lldD|lldD|AP_004186.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000262|IPR008259|IPR012133|IPR013785|IPR020920	Aldolase-type TIM barrel|Alpha-hydroxy acid dehydrogenase, FMN-dependent|FMN-dependent alpha-hydroxy acid dehydrogenase, active site|FMN-dependent dehydrogenase|L-lactate dehydrogenase [cytochrome]	GO:0003824|GO:0004460|GO:0006089|GO:0010181|GO:0016491|GO:0055114	G3DSA:3.20.20.70|MF_01559|PF01070|PIRSF000138|PS00557|PS51349|PTHR10578|PTHR10578:SF8|SSF51395
lldP|lldP|AP_004188.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003804	L-lactate permease	GO:0005887|GO:0015129|GO:0015727	PF02652|PTHR30003|PTHR30003:SF0|TIGR00795
lldR|lldR|AP_004187.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000524|IPR008920|IPR011711|IPR011991|IPR027376	FadR/GntR C-terminal domain|Fatty acid responsive transcription factor FadR, C-terminal|GntR, C-terminal|Transcription regulator HTH, GntR|Winged helix-turn-helix DNA-binding domain	GO:0000062|GO:0003677|GO:0003700|GO:0005622|GO:0006355|GO:0019217	G3DSA:1.10.10.10|G3DSA:1.20.120.530|PF00392|PF07729|PR00035|PS50949|PTHR11751|PTHR11751:SF178|SM00345|SM00895|SSF46785|SSF48008
lnt|lnt|AP_001306.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003010|IPR004563	Apolipoprotein N-acyltransferase|Carbon-nitrogen hydrolase	GO:0006807|GO:0016021|GO:0016410|GO:0016810|GO:0042158	G3DSA:3.60.110.10|PF00795|PTHR32508|PTHR32508:SF0|SSF56317|TIGR00546
lolA|lolA|AP_001521.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004564|IPR018323	Outer membrane lipoprotein carrier protein LolA, Proteobacteria|Outer membrane lipoprotein carrier protein LolA-like	GO:0042597|GO:0042953|GO:0042954	G3DSA:2.50.20.10|MF_00240|PF03548|SSF89392|TIGR00547
lolB|lolB|AP_001834.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004565	Outer membrane lipoprotein LolB	GO:0009279|GO:0015031	G3DSA:2.50.20.10|PF03550|PTHR30634|PTHR30634:SF2|SSF89392|TIGR00548
lolC|lolC|AP_001742.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003838|IPR011925|IPR025857	Lipoprotein releasing system, transmembrane protein, LolC/E family|MacB-like periplasmic core domain|Permease FtsX-like	GO:0016020|GO:0016021|GO:0042953|GO:0042954	PF02687|PF12704|PTHR30489|PTHR30489:SF0|TIGR02212
lolD|lolD|AP_001743.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003439|IPR003593|IPR011924|IPR015854|IPR017871|IPR027417	AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter, lipoprotein release, LolD|ABC transporter-like|Lipoprotein releasing system, ATP-binding protein|P-loop containing nucleoside triphosphate hydrolase	GO:0000166|GO:0005524|GO:0006810|GO:0016020|GO:0016887|GO:0017111|GO:0042953|GO:0042954	G3DSA:3.40.50.300|PF00005|PS00211|PS50893|PS51244|PTHR24220|PTHR24220:SF111|SM00382|SSF52540|TIGR02211
lolE|lolE|AP_001744.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003838|IPR011925|IPR011926|IPR025857	Lipoprotein releasing system, transmembrane protein LolE|Lipoprotein releasing system, transmembrane protein, LolC/E family|MacB-like periplasmic core domain|Permease FtsX-like	GO:0006810|GO:0009276|GO:0016020|GO:0016021|GO:0042953|GO:0042954	PF02687|PF12704|PTHR30489|PTHR30489:SF0|TIGR02212|TIGR02213
lon|lon|AP_001089.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003111|IPR003593|IPR003959|IPR004815|IPR008268|IPR008269|IPR014721|IPR015947|IPR020568|IPR027065|IPR027417|IPR027543	AAA+ ATPase domain|ATPase, AAA-type, core|Lon protease|Lon protease, bacterial|Lon protease, bacterial/eukaryotic-type|P-loop containing nucleoside triphosphate hydrolase|PUA-like domain|Peptidase S16, Lon C-terminal|Peptidase S16, active site|Peptidase S16, lon N-terminal|Ribosomal protein S5 domain 2-type fold|Ribosomal protein S5 domain 2-type fold, subgroup	GO:0000166|GO:0004176|GO:0004252|GO:0005524|GO:0006508|GO:0017111|GO:0030163|GO:0043565	G3DSA:1.10.8.60|G3DSA:3.30.230.10|G3DSA:3.40.50.300|MF_01973|PF00004|PF02190|PF05362|PIRSF001174|PR00830|PS01046|PTHR10046|PTHR10046:SF24|SM00382|SM00464|SSF52540|SSF54211|SSF88697|TIGR00763
lpcA|lpcA|AP_000877.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001347|IPR004515	Phosphoheptose isomerase|Sugar isomerase (SIS)	GO:0005737|GO:0005975|GO:0008968|GO:0009244|GO:0030246	G3DSA:3.40.50.10490|MF_00067|PF13580|PS51464|PTHR30390|PTHR30390:SF0|SSF53697|TIGR00441
lpd|lpd|AP_000777.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001327|IPR004099|IPR006258|IPR012999|IPR013027|IPR016156|IPR023753	Dihydrolipoamide dehydrogenase|FAD-dependent pyridine nucleotide-disulphide oxidoreductase|FAD/NAD-linked reductase, dimerisation|Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain|Pyridine nucleotide-disulphide oxidoreductase, NAD-binding domain|Pyridine nucleotide-disulphide oxidoreductase, class I, active site|Pyridine nucleotide-disulphide oxidoreductase, dimerisation	GO:0004148|GO:0005737|GO:0016491|GO:0016668|GO:0045454|GO:0050660|GO:0055114	G3DSA:3.30.390.30|G3DSA:3.50.50.60|PF00070|PF02852|PF07992|PR00368|PR00411|PS00076|PTHR22912|PTHR22912:SF20|SSF51905|SSF55424|TIGR01350
lplA|lplA|AP_004874.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004143|IPR004562|IPR019491|IPR023741	Biotin/lipoate A/B protein ligase|Lipoate protein ligase, C-terminal|Lipoate-protein ligase A|Lipoyltransferase/lipoate-protein ligase	GO:0003824|GO:0006464|GO:0009249|GO:0016740|GO:0016979|GO:0018055	G3DSA:3.30.390.50|G3DSA:3.90.1550.10|MF_01602|PF03099|PF10437|PTHR12561|PTHR12561:SF0|SSF55681|SSF82649|TIGR00545
lpp|lpp|AP_002297.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR006817|IPR016367	LPP motif|Murein-lipoprotein	GO:0019867	G3DSA:1.20.5.190|PF04728|PIRSF002855|PS51257|SSF58042
lpxA|lpxA|AP_000841.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001451|IPR010137|IPR011004|IPR018357	Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase|Bacterial transferase hexapeptide repeat|Hexapeptide transferase, conserved site|Trimeric LpxA-like	GO:0008610|GO:0008780|GO:0016740	G3DSA:1.20.1180.10|G3DSA:2.160.10.10|MF_00387|PF00132|PF13720|PIRSF000456|PS00101|PTHR19136|PTHR19136:SF32|SSF51161|TIGR01852
lpxB|lpxB|AP_000842.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003835	Glycosyl transferase, family 19	GO:0008915|GO:0009245	G3DSA:3.40.50.2000|PF02684|PTHR30372|SSF53756|TIGR00215
lpxC|lpxC|AP_000759.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004463|IPR011334|IPR015870|IPR020568	Ribosomal protein S5 domain 2-type fold|UDP-3-O-acyl N-acetylglucosamine deacetylase|UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal|UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal	GO:0008759|GO:0009245	G3DSA:3.30.1700.10|G3DSA:3.30.230.20|MF_00388|PF03331|PTHR32133|SSF54211|TIGR00325
lpxD|lpxD|AP_000839.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001451|IPR007691|IPR011004|IPR018357|IPR020573	Bacterial transferase hexapeptide repeat|Hexapeptide transferase, conserved site|Trimeric LpxA-like|UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase|UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region	GO:0009245|GO:0016740|GO:0016747	G3DSA:2.160.10.10|MF_00523|PF00132|PF04613|PS00101|PTHR22572|PTHR22572:SF40|SSF51161|TIGR01853
lpxH|lpxH|AP_001171.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004843|IPR010138	Metallophosphoesterase domain|UDP-2,3-diacylglucosamine hydrolase	GO:0005737|GO:0009245|GO:0016462|GO:0016787	G3DSA:3.60.21.10|MF_00575|PF00149|SSF56300|TIGR01854
lpxK|lpxK|AP_001545.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003758|IPR027417	P-loop containing nucleoside triphosphate hydrolase|Tetraacyldisaccharide 4'-kinase	GO:0005524|GO:0009029|GO:0009245	G3DSA:3.40.50.300|MF_00409|PF02606|PTHR30160|PTHR30160:SF0|SSF52540|TIGR00682
lpxL|lpxL|AP_001680.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004960|IPR011920	Bacterial lipid A biosynthesis acyltransferase|Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase	GO:0009244|GO:0009276|GO:0016021|GO:0016746|GO:0016747	PF03279|PIRSF026649|PTHR30606|TIGR02207
lpxM|lpxM|AP_002475.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004960|IPR011921	Bacterial lipid A biosynthesis acyltransferase|Lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase	GO:0009103|GO:0009244|GO:0009276|GO:0016021|GO:0016746|GO:0016747	PF03279|PIRSF026649|PTHR30606|TIGR02208
lrhA|lrhA|AP_002887.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000847|IPR005119|IPR011991	LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain	GO:0003700|GO:0006355	G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PR00039|PS50931|PTHR30579|PTHR30579:SF0|SSF46785|SSF53850
lrp|lrp|AP_001519.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000485|IPR011008|IPR011991|IPR019885|IPR019887|IPR019888	AsnC-type HTH domain|Dimeric alpha-beta barrel|Transcription regulator AsnC-type|Transcription regulator AsnC-type, C-terminal|Transcription regulator HTH, AsnC-type, conserved site|Winged helix-turn-helix DNA-binding domain	GO:0003700|GO:0005622|GO:0006355|GO:0043565	G3DSA:1.10.10.10|G3DSA:3.30.70.920|PF01037|PF13412|PR00033|PS00519|PS50956|PTHR30154|PTHR30154:SF0|SM00344|SSF46785|SSF54909
lspA|lspA|AP_000691.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001872	Peptidase A8, signal peptidase II	GO:0004190|GO:0006508|GO:0016020	MF_00161|PF01252|PR00781|PS00855|TIGR00077
lsrB|lsrB|AP_002137.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR025997	Periplasmic binding protein domain		G3DSA:3.40.50.2300|PF13407|PTHR32196|PTHR32196:SF1|SSF53822
lsrC|lsrC|AP_002135.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001851	ABC transporter, permease	GO:0005215|GO:0006810|GO:0016020	PF02653|PTHR30147
lsrD|lsrD|AP_002136.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001851	ABC transporter, permease	GO:0005215|GO:0006810|GO:0016020	PF02653|PTHR32196
lsrF|lsrF|AP_002138.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002915|IPR013785	Aldolase-type TIM barrel|DeoC/FbaB/ lacD aldolase	GO:0003824|GO:0016829	G3DSA:3.20.20.70|PF01791|SSF51569
lsrG|lsrG|AP_002139.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR007138|IPR011008	Antibiotic biosynthesis monooxygenase|Dimeric alpha-beta barrel		G3DSA:3.30.70.900|PF03992|SSF54909
ltaE|ltaE|AP_001501.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001597|IPR015421|IPR015422|IPR015424|IPR023603	Aromatic amino acid beta-eliminating lyase/threonine aldolase|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2|Threonine aldolase	GO:0003824|GO:0006520|GO:0016829|GO:0030170	G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF01212|PIRSF017617|PTHR10289|PTHR10289:SF0|SSF53383
luxS|luxS|AP_003259.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003815|IPR011249	Metalloenzyme, LuxS/M16 peptidase-like|S-ribosylhomocysteinase (LuxS)	GO:0003824|GO:0005506|GO:0009372|GO:0043768|GO:0046872	G3DSA:3.30.1360.80|MF_00091|PD013172|PF02664|PIRSF006160|PR01487|SSF63411
lysA|lysA|AP_003401.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000183|IPR002986|IPR009006|IPR022643|IPR022644|IPR022653|IPR022657	Alanine racemase/group IV decarboxylase, C-terminal|Diaminopimelate decarboxylase, LysA|Orn/DAP/Arg decarboxylase 2, C-terminal|Orn/DAP/Arg decarboxylase 2, N-terminal|Orn/DAP/Arg decarboxylase 2, conserved site|Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site|Ornithine/DAP/Arg decarboxylase	GO:0003824|GO:0008836|GO:0009089	G3DSA:2.40.37.10|G3DSA:3.20.20.10|MF_02120|PF00278|PF02784|PR01179|PR01181|PS00878|PS00879|PTHR11482|PTHR11482:SF35|SSF50621|SSF51419|TIGR01048
lysC|lysC|AP_004525.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001048|IPR001341|IPR002912|IPR005260|IPR018042	ACT domain|Aspartate kinase domain|Aspartate kinase, conserved site|Aspartate kinase, monofunctional class|Aspartate/glutamate/uridylate kinase	GO:0004072|GO:0008152|GO:0008652|GO:0009089|GO:0016597	G3DSA:3.40.1160.10|PF00696|PF01842|PIRSF000726|PS00324|PTHR21499|PTHR21499:SF15|SSF53633|SSF55021|TIGR00656|TIGR00657
lysP|lysP|AP_002753.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002293|IPR004840|IPR004841	Amino acid permease domain|Amino acid permease, conserved site|Amino acid/polyamine transporter I	GO:0003333|GO:0006810|GO:0006865|GO:0015171|GO:0016020|GO:0016021|GO:0055085	PF00324|PIRSF006060|PS00218|PTHR11785|PTHR11785:SF23
lysR|lysR|AP_003402.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000847|IPR005119|IPR011991	LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain	GO:0003700|GO:0006355	G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PR00039|PS50931|PTHR30427|PTHR30427:SF0|SSF46785|SSF53850
lysS|lysS|AP_003449.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002313|IPR004364|IPR004365|IPR006195|IPR012340|IPR018149|IPR018150	Aminoacyl-tRNA synthetase, class II|Aminoacyl-tRNA synthetase, class II (D/K/N)|Aminoacyl-tRNA synthetase, class II (D/K/N)-like|Lysine-tRNA ligase, class II|Lysyl-tRNA synthetase, class II, C-terminal|Nucleic acid binding, OB-fold, tRNA/helicase-type|Nucleic acid-binding, OB-fold	GO:0000166|GO:0003676|GO:0004812|GO:0004824|GO:0005524|GO:0005737|GO:0006418|GO:0006430	G3DSA:2.40.50.140|G3DSA:3.30.930.10|MF_00252|PF00152|PF01336|PR00982|PS50862|PTHR22594|PTHR22594:SF4|SSF50249|SSF55681|TIGR00499
lysU|lysU|AP_004631.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002313|IPR004364|IPR004365|IPR006195|IPR012340|IPR018149|IPR018150	Aminoacyl-tRNA synthetase, class II|Aminoacyl-tRNA synthetase, class II (D/K/N)|Aminoacyl-tRNA synthetase, class II (D/K/N)-like|Lysine-tRNA ligase, class II|Lysyl-tRNA synthetase, class II, C-terminal|Nucleic acid binding, OB-fold, tRNA/helicase-type|Nucleic acid-binding, OB-fold	GO:0000166|GO:0003676|GO:0004812|GO:0004824|GO:0005524|GO:0005737|GO:0006418|GO:0006430	G3DSA:2.40.50.140|G3DSA:3.30.930.10|MF_00252|PF00152|PF01336|PR00982|PS50862|PTHR22594|PTHR22594:SF4|SSF50249|SSF55681|TIGR00499
lyxK|lyxK|AP_004212.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR018483|IPR018484|IPR018485	Carbohydrate kinase, FGGY, C-terminal|Carbohydrate kinase, FGGY, N-terminal|Carbohydrate kinase, FGGY, conserved site	GO:0005975|GO:0016773	G3DSA:3.30.420.40|PF00370|PF02782|PS00445|PTHR10196|PTHR10196:SF26|SSF53067
maa|maa|AP_001108.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001451|IPR011004|IPR018357|IPR024688	Bacterial transferase hexapeptide repeat|Hexapeptide transferase, conserved site|Maltose/galactoside acetyltransferase|Trimeric LpxA-like	GO:0016407|GO:0016740	G3DSA:2.160.10.10|PF00132|PF12464|PS00101|PTHR23416|PTHR23416:SF7|SSF51161
macA|macA|AP_001509.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR006143	RND efflux pump, membrane fusion protein	GO:0016020|GO:0055085	G3DSA:2.40.50.100|PF12700|PTHR30572|PTHR30572:SF1|SSF111369|TIGR01730
macB|macB|AP_001510.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003439|IPR003593|IPR003838|IPR025857|IPR027417	AAA+ ATPase domain|ABC transporter-like|MacB-like periplasmic core domain|P-loop containing nucleoside triphosphate hydrolase|Permease FtsX-like	GO:0000166|GO:0005524|GO:0016020|GO:0016887|GO:0017111	G3DSA:3.40.50.300|PF00005|PF02687|PF12704|PTHR24220|PTHR24220:SF86|SM00382|SSF52540
maeB|maeB|AP_003048.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002505|IPR012188|IPR012301|IPR012302|IPR015884|IPR016040	Malic enzyme, N-terminal|Malic enzyme, NAD-binding|Malic enzyme, conserved site|Malic enzyme, phosphate acetyl/butaryl transferase|NAD(P)-binding domain|Phosphate acetyl/butaryl transferase	GO:0004473|GO:0005829|GO:0006108|GO:0008152|GO:0016491|GO:0016616|GO:0016746|GO:0030145|GO:0046872|GO:0051287|GO:0055114	G3DSA:3.40.50.10380|G3DSA:3.40.50.10750|G3DSA:3.40.50.720|PF00390|PF01515|PF03949|PIRSF036684|PS00331|PTHR23406|PTHR23406:SF9|SM00919|SSF51735|SSF53223|SSF53659
mak|mak|AP_001045.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000600	ROK		G3DSA:3.30.420.40|PF00480|PS01125|PTHR18964|PTHR18964:SF98|SSF53067
malE|malE|AP_004535.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR006059|IPR006060|IPR006061	Bacterial extracellular solute-binding family 1, conserved site|Bacterial extracellular solute-binding, family 1|Maltose binding protein	GO:0005215|GO:0005363|GO:0006810|GO:0015768	G3DSA:3.40.190.10|PF01547|PR00181|PS01037|PTHR32371|PTHR32371:SF1|SSF53850
malF|malF|AP_004534.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000515	Binding-protein-dependent transport systems inner membrane component	GO:0005215|GO:0006810|GO:0016020	G3DSA:1.10.3720.10|G3DSA:1.20.58.370|G3DSA:2.40.430.10|G3DSA:3.10.650.10|PF00528|PS50928|PTHR32371|PTHR32371:SF0|SSF160964|SSF161098
malG|malG|AP_004533.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000515	Binding-protein-dependent transport systems inner membrane component	GO:0005215|GO:0006810|GO:0016020	G3DSA:1.10.3720.10|PF00528|PS50928|PTHR32243|SSF161098
malI|malI|AP_002241.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000843|IPR001761|IPR010982|IPR026909	Lambda repressor-like, DNA-binding domain|Maltose regulon regulatory protein MalI|Periplasmic binding protein/LacI sugar binding domain|Transcription regulator HTH, LacI	GO:0003677|GO:0003700|GO:0005622|GO:0006355	G3DSA:1.10.260.40|G3DSA:3.40.50.2300|PF00356|PF00532|PS00356|PS50932|PTHR30146|PTHR30146:SF3|SM00354|SSF47413|SSF53822
malK|malK|AP_004536.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003439|IPR003593|IPR008995|IPR012340|IPR013611|IPR015855|IPR017871|IPR027417	AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter, maltose/maltodextrin import, MalK|ABC transporter-like|Molybdate/tungstate binding, C-terminal|Nucleic acid-binding, OB-fold|P-loop containing nucleoside triphosphate hydrolase|Transport-associated OB, type 2	GO:0000166|GO:0005215|GO:0005524|GO:0006810|GO:0015423|GO:0015768|GO:0016020|GO:0016820|GO:0016887|GO:0017111|GO:0043190	G3DSA:2.40.50.100|G3DSA:2.40.50.140|G3DSA:3.40.50.300|PF00005|PF08402|PS00211|PS50893|PS51245|PTHR24220|PTHR24220:SF151|SM00382|SSF50331|SSF52540
malM|malM|AP_004538.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR010794	Maltose operon periplasmic	GO:0008643|GO:0042597	PF07148
malP|malP|AP_004373.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000811|IPR011833	Glycogen/starch/alpha-glucan phosphorylase|Glycosyl transferase, family 35	GO:0004645|GO:0005975|GO:0008184|GO:0030170	G3DSA:3.40.50.2000|PF00343|PIRSF000460|PS00102|PTHR11468|PTHR11468:SF0|SSF53756|TIGR02093
malQ|malQ|AP_004374.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003385|IPR013781|IPR017853	Glycoside hydrolase, catalytic domain|Glycoside hydrolase, family 77|Glycoside hydrolase, superfamily	GO:0003824|GO:0004134|GO:0005975	G3DSA:3.20.20.80|PF02446|PTHR32438|PTHR32438:SF0|SSF51445|TIGR00217
malS|malS|AP_004221.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR006047|IPR006589|IPR013781|IPR014635|IPR015902|IPR017853	Alpha-amylase, MalS type|Glycoside hydrolase, catalytic domain|Glycoside hydrolase, family 13|Glycoside hydrolase, superfamily|Glycosyl hydrolase, family 13, catalytic domain|Glycosyl hydrolase, family 13, subfamily, catalytic domain	GO:0003824|GO:0004556|GO:0005509|GO:0005975|GO:0030980|GO:0042597|GO:0043169|GO:0051692	G3DSA:3.20.20.80|PF00128|PIRSF036917|PTHR10357|PTHR10357:SF86|SM00642|SSF51445
malT|malT|AP_004372.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000792|IPR011990|IPR011991|IPR016032|IPR023768|IPR027417	P-loop containing nucleoside triphosphate hydrolase|Signal transduction response regulator, C-terminal effector|Tetratricopeptide-like helical|Transcription regulator LuxR, C-terminal|Transcriptional regulator HTH-type, MalT|Winged helix-turn-helix DNA-binding domain	GO:0003677|GO:0003700|GO:0005515|GO:0005622|GO:0006355|GO:0043565	G3DSA:1.10.10.10|G3DSA:1.25.40.10|G3DSA:3.40.50.300|MF_01247|PF00196|PR00038|PS00622|PS50043|PTHR30156|SM00421|SSF46894|SSF48452|SSF52540
malX|malX|AP_002242.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001996|IPR003352|IPR004719|IPR011301|IPR011535|IPR013013|IPR018113	PTS system, maltose/glucose-specific IIBC component|Phosphotransferase system EIIB/cysteine, phosphorylation site|Phosphotransferase system, EIIB component, type 1|Phosphotransferase system, EIIC|Phosphotransferase system, EIIC component, type 1|Phosphotransferase system, glucose-like IIB component|Phosphotransferase system, maltose/glucose-specific IIC component	GO:0005351|GO:0006810|GO:0008982|GO:0009401|GO:0016020|GO:0016021	G3DSA:3.30.1360.60|PF00367|PF02378|PS01035|PS51098|PS51103|PTHR30009|PTHR30009:SF1|SSF55604|TIGR00826|TIGR00852|TIGR02004
malY|malY|AP_002243.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004839|IPR015421|IPR015422|IPR015424|IPR027619	Aminotransferase, class I/classII|Putative C-S lyase|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2	GO:0003824|GO:0009058|GO:0030170	G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF00155|PTHR11751|PTHR11751:SF21|SSF53383|TIGR04350
malZ|malZ|AP_001053.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004185|IPR006047|IPR006589|IPR013780|IPR013781|IPR014756|IPR015902|IPR017069|IPR017853	Glycoside hydrolase, catalytic domain|Glycoside hydrolase, family 13|Glycoside hydrolase, family 13, N-terminal Ig-like domain|Glycoside hydrolase, superfamily|Glycosyl hydrolase, family 13, all-beta|Glycosyl hydrolase, family 13, catalytic domain|Glycosyl hydrolase, family 13, subfamily, catalytic domain|Immunoglobulin E-set|Maltodextrin glucosidase	GO:0003824|GO:0004553|GO:0004558|GO:0005737|GO:0005975|GO:0043169	G3DSA:2.60.40.1180|G3DSA:3.20.20.80|PF00128|PF02903|PIRSF036918|PTHR10357|PTHR10357:SF11|SM00642|SSF51011|SSF51445|SSF81296
manA|manA|AP_002234.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001250|IPR011051|IPR014710|IPR016305|IPR018050	Mannose-6-phosphate isomerase|Mannose-6-phosphate isomerase, type I|Phosphomannose isomerase, type I, conserved site|RmlC-like cupin domain|RmlC-like jelly roll fold	GO:0004476|GO:0005975|GO:0008270|GO:0009298	G3DSA:1.10.441.10|G3DSA:2.60.120.10|PF01238|PIRSF001480|PR00714|PS00965|PS00966|PTHR10309|PTHR10309:SF0|SSF51182|TIGR00218
manX|manX|AP_002436.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004701|IPR004720|IPR013789|IPR018455	Phosphotransferase system, fructose subfamily IIA component|Phosphotransferase system, fructose subfamily IIA component, subgroup|Phosphotransferase system, sorbose subfamily IIB component|Phosphotransferase system, sorbose subfamily IIB component, subgroup	GO:0005737|GO:0008643|GO:0008982|GO:0009401|GO:0016021|GO:0016773	G3DSA:3.40.35.10|G3DSA:3.40.50.510|PF03610|PF03830|PS51096|PS51101|SSF52728|SSF53062|TIGR00824|TIGR00854
manY|manY|AP_002437.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004700|IPR018404	Phosphotransferase system, sorbose-specific IIC subunit|Phosphotransferase system, sorbose-specific IIC subunit, subgroup	GO:0009401|GO:0016021	PF03609|PS51106|PTHR32502|PTHR32502:SF0|TIGR00822
manZ|manZ|AP_002438.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004704|IPR018405	Phosphotransferase system, mannose/fructose/sorbose family IID component|Phosphotransferase system, mannose/fructose/sorbose family IID component, subgroup	GO:0009401|GO:0016021	PF03613|PS51108|PTHR32502|PTHR32502:SF0|TIGR00828
maoC|maoC|AP_002014.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002539|IPR011966|IPR015590|IPR016161|IPR016162|IPR016163	Aldehyde dehydrogenase domain|Aldehyde dehydrogenase, C-terminal|Aldehyde dehydrogenase, N-terminal|Aldehyde/histidinol dehydrogenase|MaoC-like domain|Phenylacetic acid degradation protein PaaN	GO:0008152|GO:0016491|GO:0016620|GO:0055114	G3DSA:3.10.129.10|G3DSA:3.40.309.10|G3DSA:3.40.605.10|PF00171|PF01575|PTHR11699|PTHR11699:SF12|SSF53720|SSF54637|TIGR02278
map|map|AP_000828.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000994|IPR001714|IPR002467	Peptidase M24, methionine aminopeptidase|Peptidase M24, structural domain|Peptidase M24A, methionine aminopeptidase, subfamily 1	GO:0004177|GO:0006508|GO:0008235|GO:0009987	G3DSA:3.90.230.10|PF00557|PR00599|PS00680|PTHR10804|PTHR10804:SF45|SSF55920|TIGR00500
marA|marA|AP_002152.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR009057|IPR018060|IPR018062	DNA binding HTH domain, AraC-type|HTH domain AraC-type, conserved site|Homeodomain-like	GO:0003677|GO:0003700|GO:0005622|GO:0006355|GO:0043565	G3DSA:1.10.10.60|PF00165|PS00041|PS01124|PTHR24792|PTHR24792:SF1|SM00342|SSF46689
marB|marB|AP_002153.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR025732	MarB protein		PD027692|PF13999
marC|marC|AP_002150.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002771	Multiple antibiotic resistance (MarC)-related	GO:0016021	PF01914|TIGR00427
marR|marR|AP_002151.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000835|IPR011991|IPR023187	Transcription regulator HTH, MarR-type|Transcriptional regulator MarR-type, conserved site|Winged helix-turn-helix DNA-binding domain	GO:0003700|GO:0005622|GO:0006355	G3DSA:1.10.10.10|PF01047|PR00598|PS01117|PS50995|SM00347|SSF46785
mazG|mazG|AP_003347.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004518|IPR011551	NTP pyrophosphohydrolase MazG, bacterial|NTP pyrophosphohydrolase MazG, putative catalytic core		G3DSA:1.10.287.1080|PF03819|PTHR30522|PTHR30522:SF0|SSF101386|TIGR00444
mcrA|mcrA|AP_001784.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002711|IPR003615	HNH endonuclease|HNH nuclease	GO:0003676|GO:0004519	PF01844|SM00507
mcrB|mcrB|AP_004835.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003593|IPR011704|IPR021961|IPR027417	AAA+ ATPase domain|ATPase, dynein-related, AAA domain|P-loop containing nucleoside triphosphate hydrolase|Protein of unknown function DUF3578	GO:0000166|GO:0005524|GO:0016887|GO:0017111	G3DSA:3.40.50.300|PF07728|PF12102|PTHR11262|PTHR11262:SF5|SM00382|SSF52540
mcrC|mcrC|AP_004834.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR014407|IPR019292	5-methylcytosine restriction system component|McrBC 5-methylcytosine restriction system component, bacterial		PF10117|PIRSF003109
mdaB|mdaB|AP_003578.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003680	Flavodoxin-like fold		G3DSA:3.40.50.360|PF02525|PTHR10204|PTHR10204:SF3|SSF52218
mdh|mdh|AP_003778.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001236|IPR001252|IPR001557|IPR010097|IPR015955|IPR016040|IPR022383|IPR023958	L-lactate/malate dehydrogenase|Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal|Lactate/malate dehydrogenase, C-terminal|Lactate/malate dehydrogenase, N-terminal|Malate dehydrogenase, active site|Malate dehydrogenase, type 1|Malate dehydrogenase, type 1, bacterial|NAD(P)-binding domain	GO:0003824|GO:0005975|GO:0006099|GO:0006108|GO:0016491|GO:0016615|GO:0016616|GO:0030060|GO:0044262|GO:0055114	G3DSA:3.40.50.720|G3DSA:3.90.110.10|MF_01516|PF00056|PF02866|PIRSF000102|PS00068|PTHR11540|PTHR11540:SF6|SSF51735|SSF56327|TIGR01772
mdlA|mdlA|AP_001098.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001140|IPR003439|IPR003593|IPR011527|IPR017871|IPR017940|IPR027417	AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter, integral membrane type 1|ABC transporter, transmembrane domain|ABC transporter, transmembrane domain, type 1|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase	GO:0000166|GO:0005524|GO:0006810|GO:0016021|GO:0016887|GO:0017111|GO:0042626|GO:0055085	G3DSA:1.20.1560.10|G3DSA:3.40.50.300|PF00005|PF00664|PS00211|PS50893|PS50929|PTHR24221|PTHR24221:SF58|SM00382|SSF52540|SSF90123
mdlB|mdlB|AP_001099.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001140|IPR003439|IPR003593|IPR011527|IPR017871|IPR017940|IPR027417	AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter, integral membrane type 1|ABC transporter, transmembrane domain|ABC transporter, transmembrane domain, type 1|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase	GO:0000166|GO:0005524|GO:0006810|GO:0016021|GO:0016887|GO:0017111|GO:0042626|GO:0055085	G3DSA:1.20.1560.10|G3DSA:3.40.50.300|PF00005|PF00664|PS00211|PS50893|PS50929|PTHR24223|PTHR24223:SF128|SM00382|SSF52540|SSF90123
mdoB|mdoB|AP_004848.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000917|IPR017849|IPR017850|IPR020881	Alkaline phosphatase-like, alpha/beta/alpha|Alkaline-phosphatase-like, core domain|Phosphoglycerol transferase I|Sulfatase	GO:0003824|GO:0005886|GO:0008152|GO:0008484|GO:0008960|GO:0009250	G3DSA:3.40.720.10|MF_01070|PF00884|SSF53649
mdoC|mdoC|AP_001674.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002656|IPR023723	Acyltransferase 3|Glucan biosynthesis protein C	GO:0016741|GO:0016747	MF_01066|PF01757
mdoD|mdoD|AP_002048.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR007444|IPR011013|IPR013783|IPR014438|IPR014718|IPR014756	Galactose mutarotase-like domain|Glucan biosynthesis, periplasmic, MdoG C-terminal|Glucan biosynthesis, periplasmic, MdoG/D|Glycoside hydrolase-type carbohydrate-binding, subgroup|Immunoglobulin E-set|Immunoglobulin-like fold	GO:0003824|GO:0005975|GO:0016051|GO:0030246|GO:0042597	G3DSA:2.60.40.10|G3DSA:2.70.98.10|PF04349|PIRSF006281|PTHR30504|PTHR30504:SF0|SSF74650|SSF81296
mdoG|mdoG|AP_001675.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR007444|IPR011013|IPR013783|IPR014438|IPR014718|IPR014756|IPR023704	Galactose mutarotase-like domain|Glucan biosynthesis protein G|Glucan biosynthesis, periplasmic, MdoG C-terminal|Glucan biosynthesis, periplasmic, MdoG/D|Glycoside hydrolase-type carbohydrate-binding, subgroup|Immunoglobulin E-set|Immunoglobulin-like fold	GO:0003824|GO:0005975|GO:0016051|GO:0030246|GO:0042597	G3DSA:2.60.40.10|G3DSA:2.70.98.10|MF_01069|PF04349|PIRSF006281|PTHR30504|PTHR30504:SF0|SSF74650|SSF81296
mdoH|mdoH|AP_001676.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001173|IPR023725	Glucan biosynthesis glucosyltransferase H|Glycosyl transferase, family 2	GO:0016758	MF_01072|PF00535|PTHR30316|PTHR30316:SF0|SSF53448
mdtA|mdtA|AP_002674.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR006143|IPR022824	Multidrug resistance protein MdtA|RND efflux pump, membrane fusion protein	GO:0016020|GO:0055085	G3DSA:2.40.50.100|MF_01422|PF12700|PTHR30469|SSF111369|TIGR01730
mdtB|mdtB|AP_002675.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001036|IPR022831|IPR027463	Acriflavin resistance protein|Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains|Multidrug resistance protein MdtB	GO:0005215|GO:0006810|GO:0016020	G3DSA:1.10.3850.10|G3DSA:1.20.1640.10|G3DSA:3.30.2090.10|G3DSA:3.30.70.1430|MF_01423|PF00873|PR00702|PTHR32063|PTHR32063:SF0|SSF82693|SSF82714|SSF82866
mdtC|mdtC|AP_002676.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001036|IPR023931|IPR027463	Acriflavin resistance protein|Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains|Multidrug resistance protein MdtC	GO:0005215|GO:0006810|GO:0016020	G3DSA:1.10.3850.10|G3DSA:1.20.1640.10|G3DSA:3.30.2090.10|G3DSA:3.30.70.1430|MF_01424|PF00873|PR00702|PTHR32063|PTHR32063:SF0|SSF82693|SSF82714|SSF82866
mdtD|mdtD|AP_002677.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001411|IPR004638|IPR011701|IPR016196	Drug resistance transporter EmrB/QacA subfamily|Major facilitator superfamily|Major facilitator superfamily domain, general substrate transporter|Tetracycline resistance protein TetB/drug resistance transporter	GO:0006810|GO:0016021|GO:0055085	G3DSA:1.20.1250.20|PF07690|PR01036|PTHR24003|SSF103473|TIGR00711
mdtE|mdtE|AP_004280.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR006143	RND efflux pump, membrane fusion protein	GO:0016020|GO:0055085	G3DSA:2.40.50.100|PF00529|PS51257|PTHR30158|PTHR30158:SF0|SSF111369|TIGR01730
mdtF|mdtF|AP_004279.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001036|IPR004764|IPR027463	Acriflavin resistance protein|Hydrophobe/amphiphile efflux-1 HAE1|Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains	GO:0005215|GO:0006810|GO:0016020|GO:0016021	G3DSA:1.10.3850.10|G3DSA:3.30.2090.10|G3DSA:3.30.70.1430|PF00873|PR00702|PTHR32063|PTHR32063:SF0|SSF82693|SSF82714|SSF82866|TIGR00915
mdtG|mdtG|AP_001679.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001958|IPR005828|IPR011701|IPR016196|IPR020846|IPR023692	General substrate transporter|Major facilitator superfamily|Major facilitator superfamily domain|Major facilitator superfamily domain, general substrate transporter|Multidrug resistance protein MdtG|Tetracycline resistance protein, TetA/multidrug resistance protein MdtG	GO:0005215|GO:0005886|GO:0016021|GO:0022857|GO:0055085	G3DSA:1.20.1250.20|MF_01528|PF00083|PF07690|PR01035|PS50850|PTHR24003|PTHR24003:SF257|SSF103473
mdtH|mdtH|AP_001691.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR011701|IPR016196|IPR020846|IPR022855	Major facilitator superfamily|Major facilitator superfamily domain|Major facilitator superfamily domain, general substrate transporter|Multidrug resistance protein MdtH	GO:0016021|GO:0055085	G3DSA:1.20.1250.20|MF_01529|PF07690|PS50850|PTHR24003|PTHR24003:SF34|SSF103473
mdtI|mdtI|AP_002220.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000390|IPR023737	Small multidrug resistance protein family|Spermidine export protein MdtI	GO:0005886|GO:0015606|GO:0015848|GO:0016021	MF_01597|PF00893|SSF103481
mdtJ|mdtJ|AP_002221.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000390|IPR023740	Small multidrug resistance protein family|Spermidine export protein MdtJ	GO:0005886|GO:0015606|GO:0015848|GO:0016021	MF_01598|PF00893|SSF103481
mdtK|mdtK|AP_002285.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002528|IPR022913	Multi antimicrobial extrusion protein|Multidrug resistance protein MdtK	GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085	MF_00400|PF01554|PTHR11206|PTHR11206:SF7|TIGR00797
mdtL|mdtL|AP_004079.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR011701|IPR016196|IPR020846|IPR023697	Major facilitator superfamily|Major facilitator superfamily domain|Major facilitator superfamily domain, general substrate transporter|Multidrug resistance protein MdtL	GO:0005215|GO:0005886|GO:0016021|GO:0055085	G3DSA:1.20.1250.20|MF_01530|PF07690|PS50850|PTHR24003|SSF103473
melA|melA|AP_004620.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001088|IPR015955|IPR016040|IPR019802|IPR022616	Glycoside hydrolase, family 4|Glycoside hydrolase, family 4, conserved site|Glycosyl hydrolase, family 4, C-terminal|Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal|NAD(P)-binding domain	GO:0003824|GO:0004553|GO:0005975|GO:0016616|GO:0055114	G3DSA:3.40.50.720|G3DSA:3.90.110.10|PF02056|PF11975|PR00732|PS01324|PTHR32092|PTHR32092:SF0|SSF51735|SSF56327
melB|melB|AP_004621.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001927|IPR016196|IPR018043	Major facilitator superfamily domain, general substrate transporter|Sodium:galactoside symporter|Sodium:galactoside symporter, conserved site	GO:0005215|GO:0006814|GO:0016020	G3DSA:1.20.1250.20|PF13347|PS00872|PTHR32425|PTHR32425:SF3|SSF103473|TIGR00792
melR|melR|AP_004619.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR008917|IPR009057|IPR011051|IPR014710|IPR018060|IPR020449	DNA binding HTH domain, AraC-type|Eukaryotic transcription factor, Skn-1-like, DNA-binding|Homeodomain-like|RmlC-like cupin domain|RmlC-like jelly roll fold|Transcription regulator HTH, AraC- type	GO:0003677|GO:0003700|GO:0005622|GO:0006355|GO:0043565	G3DSA:1.10.10.60|G3DSA:2.60.120.10|PF12833|PR00032|PTHR11019|PTHR11019:SF11|SM00342|SSF46689|SSF47454|SSF51182
menA|menA|AP_003879.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000537|IPR004657|IPR026046	1,4-dihydroxy-2-naphthoate octaprenyltransferase|UbiA prenyltransferase domain containing protein 1|UbiA prenyltransferase family	GO:0004659|GO:0009234|GO:0016021|GO:0016740	PF01040|PIRSF005355|PTHR13929|PTHR13929:SF0|TIGR00751
menB|menB|AP_002860.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001753|IPR010198|IPR014748|IPR018376	Crontonase, C-terminal|Crotonase superfamily|Enoyl-CoA hydratase/isomerase, conserved site|Naphthoate synthase	GO:0003824|GO:0008152|GO:0008935|GO:0009234	G3DSA:1.10.12.10|G3DSA:3.90.226.10|PF00378|PS00166|PTHR11941|SSF52096|TIGR01929
menC|menC|AP_002859.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR010196|IPR013342	Mandelate racemase/muconate lactonizing enzyme, C-terminal|O-succinylbenzoic acid (OSB) synthetase	GO:0000287|GO:0009234|GO:0016836	G3DSA:3.20.20.120|G3DSA:3.30.390.10|MF_00470|PF01188|PTHR10992|PTHR10992:SF376|SM00922|SSF51604|SSF54826|TIGR01927
menD|menD|AP_002862.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004433|IPR011766|IPR012001	Menaquinone biosynthesis protein MenD|Thiamine pyrophosphate enzyme, C-terminal TPP-binding|Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain	GO:0003824|GO:0009234|GO:0030976|GO:0070204	G3DSA:3.40.50.970|MF_01659|PF02775|PF02776|PIRSF004983|PTHR18968|PTHR18968:SF3|SSF52518|TIGR00173
menE|menE|AP_002858.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000873|IPR010192|IPR020845|IPR023015	2-succinylbenzoate-CoA ligase, firmicutes|AMP-binding, conserved site|AMP-dependent synthetase/ligase|O-succinylbenzoate-CoA ligase	GO:0003824|GO:0008152|GO:0008756|GO:0009234	G3DSA:2.30.38.10|G3DSA:3.30.300.30|G3DSA:3.40.50.980|MF_00731|PF00501|PS00455|PTHR24096|PTHR24096:SF33|SSF56801|TIGR01923
menF|menF|AP_002863.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004561|IPR005801|IPR015890	ADC synthase|Chorismate binding, C-terminal|Isochorismate synthase	GO:0008909|GO:0009058	G3DSA:3.60.120.10|PF00425|PTHR11236|PTHR11236:SF3|SSF56322|TIGR00543
mepA|mepA|AP_002928.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR005073|IPR009045	Hedgehog signalling/DD-peptidase zinc-binding domain|Peptidase M74, penicillin-insensitive murein endopeptidase	GO:0004252|GO:0006508|GO:0030288	G3DSA:3.30.1380.10|MF_01623|PF03411|PIRSF018455|SSF55166
metA|metA|AP_004514.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR005697	Homoserine O-succinyltransferase	GO:0005737|GO:0008899|GO:0019281	G3DSA:3.40.50.880|MF_00295|PD037892|PF04204|PIRSF000450|PTHR20919|PTHR20919:SF0|SSF52317|TIGR01001
metB|metB|AP_003870.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000277|IPR011821|IPR015421|IPR015422|IPR015424	Cys/Met metabolism, pyridoxal phosphate-dependent enzyme|O-succinylhomoserine (thiol)-lyase|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2	GO:0003824|GO:0030170	G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF01053|PIRSF001434|PS00868|PTHR11808|PTHR11808:SF15|SSF53383|TIGR02080
metC|metC|AP_003559.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000277|IPR006233|IPR015421|IPR015422|IPR015424	Cys/Met metabolism, pyridoxal phosphate-dependent enzyme|Cystathionine beta-lyase, bacterial|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2	GO:0003824|GO:0004121|GO:0005737|GO:0006520|GO:0030170	G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF01053|PIRSF001434|PS00868|PTHR11808|PTHR11808:SF8|SSF53383|TIGR01324
metE|metE|AP_003971.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002629|IPR006276|IPR013215	Cobalamin (vitamin B12)-independent methionine synthase MetE, N-terminal|Cobalamin-independent methionine synthase|Methionine synthase, vitamin-B12 independent	GO:0003871|GO:0008270|GO:0008652|GO:0009086	G3DSA:3.20.20.210|MF_00172|PF01717|PF08267|PIRSF000382|PTHR30519|SSF51726|TIGR01371
metF|metF|AP_003868.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003171|IPR004620	5,10-methylenetetrahydrofolate reductase|Methylenetetrahydrofolate reductase	GO:0004489|GO:0005829|GO:0006555|GO:0009086|GO:0055114	G3DSA:3.20.20.220|PF02219|PTHR21091|PTHR21091:SF31|SSF51730|TIGR00676
metG|metG|AP_002712.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001412|IPR002547|IPR004495|IPR009080|IPR012340|IPR014729|IPR014758|IPR015413|IPR023458	Aminoacyl-tRNA synthetase, class 1a, anticodon-binding|Aminoacyl-tRNA synthetase, class I, conserved site|Methionine-tRNA ligase, type 1|Methionyl-tRNA synthetase|Methionyl-tRNA synthetase, class Ia, beta subunit, C-terminal|Methionyl/Leucyl tRNA synthetase|Nucleic acid-binding, OB-fold|Rossmann-like alpha/beta/alpha sandwich fold|tRNA-binding domain	GO:0000049|GO:0000166|GO:0004812|GO:0004825|GO:0005524|GO:0005737|GO:0006418|GO:0006431	G3DSA:1.10.730.10|G3DSA:2.20.28.20|G3DSA:2.40.50.140|G3DSA:3.40.50.620|MF_00098|PF01588|PF09334|PR01041|PS00178|PS50886|PTHR11946|PTHR11946:SF17|SSF47323|SSF50249|SSF52374|SSF57770|TIGR00398|TIGR00399
metH|metH|AP_004520.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000489|IPR003726|IPR003759|IPR004223|IPR006158|IPR011005|IPR011822	5-methyltetrahydrofolate--homocysteine methyltransferase|Cobalamin (vitamin B12)-binding domain|Cobalamin (vitamin B12)-binding module, cap domain|Dihydropteroate synthase-like|Homocysteine S-methyltransferase|Pterin-binding|Vitamin B12-dependent methionine synthase, activation domain	GO:0005622|GO:0008270|GO:0008705|GO:0008898|GO:0009086|GO:0031419|GO:0042558|GO:0044237|GO:0046872	G3DSA:1.10.1240.10|G3DSA:3.10.196.10|G3DSA:3.20.20.20|G3DSA:3.20.20.330|G3DSA:3.40.50.280|PF00809|PF02310|PF02574|PF02607|PF02965|PIRSF000381|PS50970|PS50972|PS50974|PS51332|PS51337|PTHR21091|PTHR21091:SF9|SM01018|SSF47644|SSF51717|SSF52242|SSF56507|SSF82282|TIGR02082
metI|metI|AP_000859.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000515	Binding-protein-dependent transport systems inner membrane component	GO:0005215|GO:0006810|GO:0016020	G3DSA:1.10.3720.10|PF00528|PS50928|PTHR30450|SSF161098
metJ|metJ|AP_003871.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002084|IPR010985|IPR023453	Methionine repressor MetJ|Methionine repressor MetJ domain|Ribbon-helix-helix	GO:0003700|GO:0006355|GO:0006555	G3DSA:1.10.140.10|MF_00744|PD020365|PF01340|SSF47598
metK|metK|AP_003499.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002133|IPR022628|IPR022629|IPR022630|IPR022631|IPR022636	S-adenosylmethionine synthetase|S-adenosylmethionine synthetase superfamily|S-adenosylmethionine synthetase, C-terminal|S-adenosylmethionine synthetase, N-terminal|S-adenosylmethionine synthetase, central domain|S-adenosylmethionine synthetase, conserved site	GO:0004478|GO:0005524|GO:0006556	G3DSA:3.30.300.10|MF_00086|PF00438|PF02772|PF02773|PIRSF000497|PS00376|PS00377|PTHR11964|PTHR11964:SF0|SSF55973|TIGR01034
metL|metL|AP_003869.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001048|IPR001341|IPR001342|IPR005106|IPR011147|IPR016040|IPR018042|IPR019811	Aspartate kinase domain|Aspartate kinase, conserved site|Aspartate/glutamate/uridylate kinase|Aspartate/homoserine dehydrogenase, NAD-binding|Bifunctional aspartokinase/homoserine dehydrogenase I|Homoserine dehydrogenase, catalytic|Homoserine dehydrogenase, conserved site|NAD(P)-binding domain	GO:0004072|GO:0004412|GO:0006520|GO:0008652|GO:0009067|GO:0016491|GO:0050661|GO:0055114	G3DSA:3.30.360.10|G3DSA:3.40.1160.10|G3DSA:3.40.50.720|PF00696|PF00742|PF03447|PIRSF000727|PS00324|PS01042|PTHR21499|PTHR21499:SF1|SSF51735|SSF53633|SSF55347|TIGR00657
metN|metN|AP_000860.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003439|IPR003593|IPR012692|IPR017871|IPR017908|IPR018449|IPR026253|IPR027417	AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter, methionine import, ATP-binding protein MetN|ABC transporter, methionine import, ATP-binding protein MetN, proteobacteria|ABC transporter, methionine import, ATP-binding protein, MetN, C-terminal|ABC transporter-like|NIL domain|P-loop containing nucleoside triphosphate hydrolase	GO:0000166|GO:0005524|GO:0009276|GO:0015821|GO:0016887|GO:0017111|GO:0043865|GO:0048473|GO:0048474	G3DSA:3.30.70.260|G3DSA:3.40.50.300|PF00005|PF09383|PS00211|PS50893|PS51264|PTHR24220|PTHR24220:SF186|SM00382|SM00930|SSF52540|SSF55021|TIGR02314
metQ|metQ|AP_000858.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004872	Lipoprotein NlpA family		G3DSA:3.40.190.10|PF03180|PIRSF002854|PS51257|PTHR30429|PTHR30429:SF0|SSF53850|TIGR00363
metR|metR|AP_003972.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000847|IPR005119|IPR011991	LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain	GO:0003700|GO:0006355	G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PR00039|PS50931|PTHR30126|SSF46785|SSF53850
mfd|mfd|AP_001740.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001650|IPR003711|IPR004576|IPR005118|IPR011545|IPR014001|IPR027417	CarD-like/TRCF domain|DNA/RNA helicase, DEAD/DEAH box type, N-terminal|Helicase, C-terminal|Helicase, superfamily 1/2, ATP-binding domain|P-loop containing nucleoside triphosphate hydrolase|Transcription-repair coupling factor|Transcription-repair-coupling factor domain	GO:0003676|GO:0003684|GO:0004386|GO:0005524|GO:0006281|GO:0008026	G3DSA:3.30.2060.10|G3DSA:3.40.50.300|PF00270|PF00271|PF02559|PF03461|PS51192|PS51194|PTHR24031|PTHR24031:SF120|SM00487|SM00490|SM00982|SM01058|SSF141259|SSF143517|SSF52540|TIGR00580
mglA|mglA|AP_002746.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003439|IPR003593|IPR015862|IPR017871|IPR027417	AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter, galactose import, MglA|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase	GO:0000166|GO:0005524|GO:0008643|GO:0016020|GO:0016887|GO:0017111|GO:0043211	G3DSA:3.40.50.300|PF00005|PS00211|PS50893|PS51260|PTHR24220|PTHR24220:SF84|SM00382|SSF52540
mglB|mglB|AP_002747.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR025997	Periplasmic binding protein domain		G3DSA:3.40.50.2300|PF13407|PTHR30036|SSF53822
mglC|mglC|AP_002745.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001851	ABC transporter, permease	GO:0005215|GO:0006810|GO:0016020	PF02653|PTHR32196|PTHR32196:SF0
mgsA|mgsA|AP_001593.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004363|IPR011607	Methylglyoxal synthase|Methylglyoxal synthase-like domain	GO:0008929|GO:0019242	G3DSA:3.40.50.1380|PF02142|PIRSF006614|PTHR30492|SM00851|SSF52335|TIGR00160
mgtA|mgtA|AP_004740.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001757|IPR004014|IPR006068|IPR006415|IPR008250|IPR018303|IPR023214|IPR023298|IPR023299	Cation-transporting P-type ATPase|Cation-transporting P-type ATPase, C-terminal|Cation-transporting P-type ATPase, N-terminal|HAD-like domain|Magnesium-transporting P-type ATPase, subfamily IIIB|P-type ATPase,  transmembrane domain|P-type ATPase, A  domain|P-type ATPase, cytoplasmic domain N|P-type ATPase, phosphorylation site	GO:0000166|GO:0006812|GO:0015444|GO:0015693|GO:0016021|GO:0019829|GO:0046872	G3DSA:1.20.1110.10|G3DSA:2.70.150.10|G3DSA:3.40.1110.10|PF00122|PF00689|PF00690|PF00702|PR01836|PS00154|PTHR24093|PTHR24093:SF128|SM00831|SSF56784|SSF81653|SSF81660|SSF81665|TIGR01494|TIGR01524
mhpA|mhpA|AP_000999.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002938|IPR003042	Aromatic-ring hydroxylase-like|Monooxygenase, FAD-binding	GO:0008152|GO:0016491	G3DSA:3.50.50.60|PF01494|PR00420|PTHR13789|PTHR13789:SF80|SSF51905
mhpB|mhpB|AP_001000.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004183|IPR023789	2,3-dihydroxyphenylpropionate/2,3-dihydroxicinnamic acid 1,2-dioxygenase|Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B	GO:0005506|GO:0006725|GO:0008198|GO:0016491|GO:0019439|GO:0047070|GO:0055114	G3DSA:3.40.830.10|MF_01653|PF02900|SSF53213
mhpC|mhpC|AP_001001.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000073|IPR000639|IPR023791	2-hydroxy-6-oxononadienedioate/2-hydroxy-6-oxononatrienedioate hydrolase|Alpha/beta hydrolase fold-1|Epoxide hydrolase-like	GO:0003824|GO:0005737|GO:0016787|GO:0018771|GO:0019439|GO:0042803	G3DSA:3.40.50.1820|MF_01654|PF12697|PR00111|PR00412|PTHR10992|PTHR10992:SF405|SSF53474
mhpD|mhpD|AP_001002.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002529|IPR011234|IPR023793	2-keto-4-pentenoate hydratase|Fumarylacetoacetase, C-terminal|Fumarylacetoacetase, C-terminal-related	GO:0003824|GO:0008152|GO:0008684|GO:0019439|GO:0030145	G3DSA:3.90.850.10|MF_01655|PF01557|PTHR30143|SSF56529
mhpE|mhpE|AP_001004.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000891|IPR012425|IPR013785|IPR017629	4-hydroxy-2-oxovalerate aldolase|Aldolase-type TIM barrel|DmpG-like communication|Pyruvate carboxyltransferase	GO:0003824|GO:0008701|GO:0016833|GO:0019439	G3DSA:1.10.8.60|G3DSA:3.20.20.70|PF00682|PF07836|PTHR10277|PTHR10277:SF3|SSF51569|SSF89000|TIGR03217
mhpF|mhpF|AP_001003.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000534|IPR003361|IPR015426|IPR016040	Acetaldehyde dehydrogenase|Acetaldehyde dehydrogenase, C-terminal|NAD(P)-binding domain|Semialdehyde dehydrogenase, NAD-binding	GO:0005737|GO:0006520|GO:0008774|GO:0016620|GO:0019439|GO:0051287|GO:0055114	G3DSA:3.30.360.10|G3DSA:3.40.50.720|MF_01657|PF01118|PF09290|PIRSF015689|PTHR21123|SM00859|SSF51735|SSF55347|TIGR03215
mhpR|mhpR|AP_000998.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR005471|IPR011991|IPR014757	Transcription regulator IclR, C-terminal|Transcription regulator IclR, N-terminal|Winged helix-turn-helix DNA-binding domain	GO:0003677|GO:0006355	G3DSA:1.10.10.10|G3DSA:3.30.450.40|PF01614|PF09339|PS51077|PS51078|PTHR30136|PTHR30136:SF0|SM00346|SSF46785|SSF55781
mhpT|mhpT|AP_001005.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR005829|IPR011701|IPR016196|IPR020846	Major facilitator superfamily|Major facilitator superfamily domain|Major facilitator superfamily domain, general substrate transporter|Sugar transporter, conserved site	GO:0005215|GO:0006810|GO:0016020|GO:0016021|GO:0055085	G3DSA:1.20.1250.20|PF07690|PS00216|PS00217|PS50850|PTHR24003|SSF103473
miaA|miaA|AP_004671.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002627|IPR018022|IPR027417	P-loop containing nucleoside triphosphate hydrolase|tRNA delta(2)-isopentenylpyrophosphate transferase|tRNA isopentenyltransferase	GO:0005524|GO:0008033	G3DSA:1.10.287.890|G3DSA:3.40.50.300|MF_00185|PF01715|PTHR11088|SSF52540|TIGR00174
miaB|miaB|AP_001310.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002792|IPR005839|IPR006463|IPR006638|IPR007197|IPR013848|IPR020612|IPR023404|IPR023970	Elongator protein 3/MiaB/NifB|Methylthiotransferase|Methylthiotransferase, N-terminal|Methylthiotransferase, conserved site|Methylthiotransferase/radical SAM-type protein|Radical SAM|Radical SAM, alpha/beta horseshoe|TRAM domain|tRNA-i(6)A37 modification enzyme MiaB	GO:0003824|GO:0005737|GO:0006400|GO:0009451|GO:0016740|GO:0043412|GO:0051536|GO:0051539	G3DSA:3.80.30.20|MF_01864|PF00919|PF01938|PF04055|PS01278|PS50926|PS51449|PTHR11918|PTHR11918:SF41|SM00729|SSF102114|TIGR00089|TIGR01574
minC|minC|AP_001801.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR005526|IPR007874|IPR013033|IPR016098	Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal|Septum formation inhibitor MinC|Septum formation inhibitor MinC, C-terminal|Septum formation inhibitor MinC, N-terminal	GO:0000902|GO:0000917|GO:0051302|GO:0051726	G3DSA:2.160.20.70|PF03775|PF05209|SSF63848|TIGR01222
minD|minD|AP_001800.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002586|IPR010223|IPR025501|IPR027417	ATP binding protein MinD|ATP binding protein MinD, bacterial-type|CobQ/CobB/MinD/ParA nucleotide binding domain|P-loop containing nucleoside triphosphate hydrolase	GO:0000918|GO:0006200|GO:0016887	G3DSA:3.40.50.300|PF01656|PIRSF003092|PTHR13696|PTHR13696:SF1|SSF52540|TIGR01968
minE|minE|AP_001799.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR005527	Septum formation topological specificity factor MinE	GO:0032955|GO:0051301	G3DSA:3.30.1070.10|MF_00262|PF03776|SSF55229|TIGR01215
mioC|mioC|AP_004045.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR008254	Flavodoxin/nitric oxide synthase	GO:0010181|GO:0016491	G3DSA:3.40.50.360|PF00258|PS50902|PTHR19384|PTHR19384:SF17|SSF52218
mipA|mipA|AP_002401.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR010583|IPR017690	MltA-interacting MipA|Outer membrane insertion C-terminal signal, omp85 target		PF06629|TIGR03304
mlrA|mlrA|AP_002723.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000551|IPR009061	DNA binding domain, putative|Transcription regulator HTH, MerR	GO:0000166|GO:0003700|GO:0006355	G3DSA:1.10.1660.10|PF13411|PS00552|PS50937|SM00422|SSF46955
mltA|mltA|AP_003379.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR005300|IPR009009|IPR010611|IPR014733|IPR026044	3D|Barwin-like endoglucanase|Barwin-related endoglucanase|Lytic transglycosylase MltA|Membrane-bound lytic murein transglycosylase A	GO:0004553|GO:0009254|GO:0019867	G3DSA:2.40.40.10|PF03562|PF06725|PIRSF019422|PS51257|PTHR30124|SM00925|SSF50685
mltB|mltB|AP_003268.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR011757|IPR023346	Lysozyme-like domain|Lytic transglycosylase MltB		G3DSA:1.10.530.10|PF13406|PS51257|PTHR30163|SSF53955|TIGR02282
mltC|mltC|AP_003520.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000189|IPR008258|IPR023346|IPR023664|IPR024570	Lysozyme-like domain|Lytic transglycosylase-like, catalytic|Murein transglycosylase-C|Murein transglycosylase-C, N-terminal|Prokaryotic transglycosylase, active site	GO:0000270|GO:0008933|GO:0009279|GO:0016020|GO:0016798|GO:0016998	G3DSA:1.10.530.10|MF_01616|PF01464|PF11873|PS00922|PS51257|PTHR21666|PTHR21666:SF57|SSF53955
mltD|mltD|AP_000866.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000189|IPR002482|IPR008258|IPR018392|IPR023346	Lysozyme-like domain|Lytic transglycosylase-like, catalytic|Peptidoglycan-binding Lysin subgroup|Peptidoglycan-binding lysin domain|Prokaryotic transglycosylase, active site	GO:0000270|GO:0008933|GO:0016020|GO:0016998	G3DSA:1.10.530.10|G3DSA:3.10.350.10|PF01464|PF01476|PS00922|PS51257|PTHR21666|PTHR21666:SF10|SM00257|SSF53955|SSF54106
mmuM|mmuM|AP_000914.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003726	Homocysteine S-methyltransferase	GO:0008898	G3DSA:3.20.20.330|PF02574|PS50970|PTHR21091|PTHR21091:SF4|SSF82282
mmuP|mmuP|AP_000913.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002293|IPR004840|IPR004841	Amino acid permease domain|Amino acid permease, conserved site|Amino acid/polyamine transporter I	GO:0003333|GO:0006810|GO:0006865|GO:0015171|GO:0016020|GO:0016021|GO:0055085	PF00324|PIRSF006060|PS00218|PTHR11785|PTHR11785:SF22
mngA|mngA|AP_001368.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002178|IPR003352|IPR003353|IPR003501|IPR004715|IPR006327|IPR013011|IPR013014|IPR016152	Phosphotransferase system, EIIB component, type 2|Phosphotransferase system, EIIB component, type 2/3|Phosphotransferase system, EIIC|Phosphotransferase system, EIIC component, type 2|Phosphotransferase system, IIA component fructose subfamily|Phosphotransferase system, fructose IIC component|Phosphotransferase system, fructose-specific IIB subunit|Phosphotransferase system, phosphoenolpyruvate-dependent sugar EIIA 2|Phosphotransferase/anion transporter	GO:0005215|GO:0005351|GO:0006810|GO:0008982|GO:0009401|GO:0016020|GO:0016021	G3DSA:3.40.50.2300|G3DSA:3.40.930.10|PF00359|PF02302|PF02378|PS00372|PS51094|PS51099|PS51104|PTHR30505|PTHR30505:SF0|SSF52794|SSF55804|TIGR00829|TIGR00848|TIGR01427
mngB|mngB|AP_001369.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000602|IPR011013|IPR011330|IPR011682|IPR015341|IPR027291	Galactose mutarotase-like domain|Glycoside hydrolase 38/57, N-terminal domain|Glycoside hydrolase family 38, N-terminal domain|Glycoside hydrolase, family 38, central domain|Glycoside hydrolase/deacetylase, beta/alpha-barrel|Glycosyl hydrolase family 38, C-terminal	GO:0003824|GO:0004553|GO:0004559|GO:0005975|GO:0006013|GO:0008270|GO:0015923|GO:0030246	G3DSA:1.20.1270.50|G3DSA:3.20.110.10|PF01074|PF07748|PF09261|PTHR11607|PTHR11607:SF2|SM00872|SSF74650|SSF88688|SSF88713
mngR|mngR|AP_001367.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000524|IPR011663|IPR011991	Transcription regulator HTH, GntR|UbiC transcription regulator-associated|Winged helix-turn-helix DNA-binding domain	GO:0003677|GO:0003700|GO:0005622|GO:0006355	G3DSA:1.10.10.10|G3DSA:3.40.1410.10|PF00392|PF07702|PR00035|PS50949|PTHR11751|PTHR11751:SF159|SM00345|SM00866|SSF46785|SSF64288
mntH|mntH|AP_002991.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001046	Natural resistance-associated macrophage like	GO:0005215|GO:0006810|GO:0016020	MF_00221|PF01566|PR00447|PTHR11706|PTHR11706:SF21|TIGR01197
mntR|mntR|AP_001448.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001367|IPR011991|IPR022687|IPR022689	Iron dependent repressor, N-terminal|Iron dependent repressor, diptheria toxin type|Iron dependent repressor-like, metal binding and dimerisation domain|Winged helix-turn-helix DNA-binding domain	GO:0003677|GO:0003700|GO:0006355|GO:0046914|GO:0046983	G3DSA:1.10.10.10|G3DSA:1.10.60.10|PF01325|PF02742|PS50944|SM00529|SSF46785|SSF47979
moaA|moaA|AP_001412.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000385|IPR006638|IPR007197|IPR010505|IPR013483|IPR013785	Aldolase-type TIM barrel|Elongator protein 3/MiaB/NifB|MoaA/nifB/pqqE, iron-sulphur binding, conserved site|Molybdenum cofactor biosynthesis protein A|Molybdenum cofactor synthesis C-terminal|Radical SAM	GO:0003824|GO:0006777|GO:0019008|GO:0046872|GO:0051536|GO:0051539	G3DSA:3.20.20.70|MF_01225_B|PF04055|PF06463|PF13353|PS01305|PTHR22960|PTHR22960:SF0|SM00729|SSF102114|TIGR02666
moaB|moaB|AP_001413.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001453|IPR008284|IPR012245|IPR013484|IPR020817	Molybdenum cofactor biosynthesis protein B, proteobacteria|Molybdenum cofactor biosynthesis protein MoaB|Molybdenum cofactor biosynthesis, conserved site|Molybdenum cofactor synthesis|Molybdopterin binding domain	GO:0006777	G3DSA:3.40.980.10|PF00994|PIRSF006443|PS01078|PTHR10192|PTHR10192:SF0|SM00852|SSF53218|TIGR00177|TIGR02667
moaC|moaC|AP_001414.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002820|IPR023045|IPR023046	Molybdenum cofactor biosynthesis C|Molybdenum cofactor biosynthesis C, bacterial-type|Molybdopterin cofactor biosynthesis C (MoaC) domain	GO:0006777	G3DSA:3.30.70.640|MF_01224_B|PF01967|PTHR26250|PTHR26250:SF0|SSF55040|TIGR00581
moaD|moaD|AP_001415.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003749|IPR010034|IPR012675|IPR016155	Beta-grasp domain|Molybdopterin converting factor, subunit 1|Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp|ThiamineS/Molybdopterin converting factor subunit 1	GO:0006777	G3DSA:3.10.20.30|PF02597|SSF54285|TIGR01682
moaE|moaE|AP_001416.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003448	Molybdopterin biosynthesis MoaE	GO:0006777	G3DSA:3.90.1170.40|PF02391|PTHR23404|PTHR23404:SF2|SSF54690
mobA|mobA|AP_003950.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR013482|IPR025877	MobA-like NTP transferase domain|Molybdenum cofactor guanylyltransferase	GO:0003824|GO:0006777	G3DSA:3.90.550.10|MF_00316|PF12804|SSF53448|TIGR02665
mobB|mobB|AP_003951.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004435|IPR027417	Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB), conserved domain|P-loop containing nucleoside triphosphate hydrolase	GO:0005525|GO:0006777	G3DSA:3.40.50.300|PF03205|SSF52540|TIGR00176
modA|modA|AP_001394.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR005950	Molybdenum ABC transporter, periplasmic binding protein	GO:0015412|GO:0015689|GO:0030288	G3DSA:3.40.190.10|PF13531|PIRSF004846|PTHR30632|PTHR30632:SF0|SSF53850|TIGR01256
modB|modB|AP_001395.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000515|IPR011867	Binding-protein-dependent transport systems inner membrane component|Molybdate ABC transporter, permease protein	GO:0005215|GO:0006810|GO:0015098|GO:0015689|GO:0016020|GO:0016021	G3DSA:1.10.3720.10|PF00528|PS50928|PTHR30183|PTHR30183:SF0|SSF161098|TIGR02141
modC|modC|AP_001396.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003439|IPR003593|IPR004606|IPR005116|IPR008995|IPR011868|IPR015852|IPR017871|IPR027417	AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter, molybdenum import, ModC|ABC transporter-like|Molybdate ABC transporter, ATP-binding protein|Molybdate/tungstate binding, C-terminal|Molybdenum-pterin binding|P-loop containing nucleoside triphosphate hydrolase|Transport-associated OB, type 1	GO:0000166|GO:0005215|GO:0005524|GO:0006810|GO:0015098|GO:0015689|GO:0016020|GO:0016820|GO:0016887|GO:0017111|GO:0030001|GO:0030151|GO:0042888|GO:0043190	G3DSA:2.40.50.100|G3DSA:3.40.50.300|PF00005|PF03459|PS00211|PS50893|PS51241|PTHR24220|PTHR24220:SF38|SM00382|SSF50331|SSF52540|TIGR00638|TIGR02142
modE|modE|AP_001392.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000847|IPR003725|IPR004606|IPR005116|IPR008995|IPR011991|IPR016462	Molybdate-dependent transcriptional regulator, ModE|Molybdate/tungstate binding, C-terminal|Molybdenum-binding protein, N-terminal|Molybdenum-pterin binding|Transcription regulator HTH, LysR|Transport-associated OB, type 1|Winged helix-turn-helix DNA-binding domain	GO:0003700|GO:0005215|GO:0005524|GO:0006355|GO:0006810|GO:0015098|GO:0015689|GO:0016820|GO:0030151|GO:0043190	G3DSA:1.10.10.10|G3DSA:2.40.50.100|PF00126|PF03459|PIRSF005763|PTHR30432|SSF46785|SSF50331|TIGR00637|TIGR00638
modF|modF|AP_001391.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003439|IPR003593|IPR027417	AAA+ ATPase domain|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase	GO:0000166|GO:0005524|GO:0016887|GO:0017111	G3DSA:3.40.50.300|PF00005|PS50893|PTHR24220|PTHR24220:SF171|SM00382|SSF52540
moeA|moeA|AP_001458.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001453|IPR005110|IPR005111|IPR008284|IPR020817	MoeA, C-terminal, domain IV|MoeA, N-terminal and linker domain|Molybdenum cofactor biosynthesis, conserved site|Molybdenum cofactor synthesis|Molybdopterin binding domain	GO:0006777|GO:0032324	G3DSA:2.170.190.11|G3DSA:2.40.340.10|G3DSA:3.40.980.10|G3DSA:3.90.105.10|PF00994|PF03453|PF03454|PS01079|PTHR10192|PTHR10192:SF0|SM00852|SSF53218|SSF63867|SSF63882|TIGR00177
moeB|moeB|AP_001457.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000594|IPR007901|IPR009036|IPR012730|IPR016040	MoeZ/MoeB|Molybdenum cofactor biosynthesis, MoeB|Molybdopterin synthase sulfurylase MoeB|NAD(P)-binding domain|UBA/THIF-type NAD/FAD binding fold	GO:0003824|GO:0006777	G3DSA:3.40.50.720|PF00899|PF05237|PTHR10953|SSF69572|TIGR02355
mog|mog|AP_000673.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001453|IPR008284|IPR020817	Molybdenum cofactor biosynthesis, conserved site|Molybdenum cofactor synthesis|Molybdopterin binding domain	GO:0006777	G3DSA:3.40.980.10|PF00994|PS01078|PTHR10192|PTHR10192:SF0|SM00852|SSF53218|TIGR00177
mokC|mokC|AP_000681.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000021|IPR018084	Hok/gef cell toxic protein|Hok/gef cell toxic protein, conserved site	GO:0016020	PD005979|PF01848|PR00281|PS00556
motA|motA|AP_002510.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000540|IPR002898|IPR022522	Flagellar motor protein MotA, conserved site|Flagellar motor stator, MotA|MotA/TolQ/ExbB proton channel	GO:0001539|GO:0003774|GO:0006810|GO:0006935|GO:0008565|GO:0016020	PF01618|PS01307|PTHR30433|PTHR30433:SF0|TIGR03818
motB|motB|AP_002509.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR006665|IPR025713	Motility protein B, N-terminal domain|Outer membrane protein, OmpA/MotB, C-terminal	GO:0009279	G3DSA:3.30.1330.60|PF00691|PF13677|PS51123|PTHR30329|PTHR30329:SF0|SSF103088
mpaA|mpaA|AP_001953.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000834	Peptidase M14, carboxypeptidase A	GO:0004181|GO:0006508|GO:0008270	G3DSA:3.40.630.10|PF00246|SSF53187
mpl|mpl|AP_004732.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000713|IPR004101|IPR005757|IPR013221|IPR016040	Mur ligase, C-terminal|Mur ligase, N-terminal|Mur ligase, central|Murein peptide ligase|NAD(P)-binding domain	GO:0005524|GO:0009058|GO:0009252|GO:0016874|GO:0016881|GO:0071555	G3DSA:3.40.1190.10|G3DSA:3.40.50.720|G3DSA:3.90.190.20|PF01225|PF02875|PF08245|PTHR23135|PTHR23135:SF8|SSF51984|SSF53244|SSF53623|TIGR01081
mppA|mppA|AP_001957.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000914|IPR023765	Bacterial extracellular solute-binding protein, family 5|Bacterial extracellular solute-binding protein, family 5, conserved site	GO:0005215|GO:0006810	G3DSA:3.10.105.10|G3DSA:3.90.76.10|PF00496|PIRSF002741|PS01040|PTHR30290|PTHR30290:SF0|SSF53850
mprA|mprA|AP_003256.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000835|IPR011991|IPR023187	Transcription regulator HTH, MarR-type|Transcriptional regulator MarR-type, conserved site|Winged helix-turn-helix DNA-binding domain	GO:0003700|GO:0005622|GO:0006355	G3DSA:1.10.10.10|PF01047|PR00598|PS01117|PS50995|SM00347|SSF46785
mqo|mqo|AP_002806.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR006231	Malate:quinone-oxidoreductase	GO:0006099|GO:0008924|GO:0055114	G3DSA:3.50.50.60|MF_00212|PF06039|PTHR13847|PTHR13847:SF14|SSF51905|TIGR01320
mraW|mraW|AP_000745.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002903|IPR023397	Ribosomal RNA small subunit methyltransferase H|S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain	GO:0008168	G3DSA:1.10.150.170|G3DSA:3.40.50.150|MF_01007|PF01795|PIRSF004486|PTHR11265|PTHR11265:SF0|SSF53335|SSF81799|TIGR00006
mraY|mraY|AP_000750.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000715|IPR003524|IPR018480	Glycosyl transferase, family 4|Phospho-N-acetylmuramoyl-pentapeptide transferase|Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site	GO:0008963|GO:0016020|GO:0016021	MF_00038|PF00953|PF10555|PS01347|PS01348|PTHR22926|PTHR22926:SF3|TIGR00445
mraZ|mraZ|AP_000744.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003444|IPR020603	MraZ|MraZ domain		MF_01008|PD006745|PF02381|SSF89447|TIGR00242
mrcA|mrcA|AP_004394.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001264|IPR001460|IPR011816|IPR012338|IPR012340|IPR023346	Beta-lactamase/transpeptidase-like|Glycosyl transferase, family 51|Lysozyme-like domain|Nucleic acid-binding, OB-fold|Penicillin-binding protein 1A|Penicillin-binding protein, transpeptidase	GO:0008233|GO:0008658|GO:0009252|GO:0016763|GO:0046677	G3DSA:1.10.3810.10|G3DSA:2.40.50.140|G3DSA:3.40.710.10|PF00905|PF00912|PTHR32282|PTHR32282:SF0|SSF53955|SSF56601|TIGR02074
mrcB|mrcB|AP_000810.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001264|IPR001460|IPR011813|IPR012338|IPR023346	Beta-lactamase/transpeptidase-like|Glycosyl transferase, family 51|Lysozyme-like domain|Penicillin-binding protein 1B|Penicillin-binding protein, transpeptidase	GO:0008233|GO:0008658|GO:0008955|GO:0009252|GO:0009274|GO:0046677	G3DSA:1.10.3810.10|G3DSA:1.20.5.100|G3DSA:3.30.2060.10|G3DSA:3.40.710.10|PF00905|PF00912|PIRSF002799|PTHR32282|PTHR32282:SF0|SSF53955|SSF56601|TIGR02071
mrdA|mrdA|AP_001284.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001460|IPR005311|IPR012338|IPR017790	Beta-lactamase/transpeptidase-like|Penicillin-binding protein 2|Penicillin-binding protein, dimerisation domain|Penicillin-binding protein, transpeptidase	GO:0008658|GO:0009252|GO:0016020	G3DSA:3.40.710.10|G3DSA:3.90.1310.10|PF00905|PF03717|PTHR30627|PTHR30627:SF0|SSF56519|SSF56601|TIGR03423
mrdB|mrdB|AP_001283.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001182|IPR011923|IPR018365	Cell cycle protein FtsW/RodA|Cell cycle, FtsW / RodA / SpoVE, conserved site|Rod shape-determining protein RodA	GO:0007049|GO:0008360|GO:0016021	PF01098|PS00428|PTHR30474|PTHR30474:SF1|TIGR02210
mreB|mreB|AP_003792.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004753	Cell shape determining protein MreB/Mrl	GO:0000902	G3DSA:3.30.420.40|G3DSA:3.90.640.10|PF06723|PR01652|PTHR19375|PTHR19375:SF117|SSF53067|TIGR00904
mreC|mreC|AP_003791.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR007221	Rod shape-determining protein MreC	GO:0008360	PF04085|TIGR00219
mreD|mreD|AP_003790.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR007227|IPR026034	Cell shape-determining protein MreD|Cell shape-determining protein MreD, proteobacterial type	GO:0008360|GO:0016021	PF04093|PIRSF018472|TIGR03426
mrp|mrp|AP_002711.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000808|IPR019591|IPR025669|IPR027417	AAA domain|ATPase-like, ParA/MinD|Mrp, conserved site|P-loop containing nucleoside triphosphate hydrolase	GO:0005524	G3DSA:3.40.50.300|PF10609|PF13614|PS01215|PTHR23264|PTHR23264:SF4|SSF117916|SSF52540
mrr|mrr|AP_004840.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR007560|IPR011335|IPR011856|IPR025745	Restriction endonuclease  type II-like|Restriction endonuclease type IV,  Mrr|Restriction system protein Mrr-like N-terminal domain|tRNA endonuclease-like domain	GO:0003676|GO:0003677|GO:0004518|GO:0004519|GO:0009307	G3DSA:3.40.1350.10|PF04471|PF14338|PTHR30015|PTHR30015:SF0|SSF52980
msbA|msbA|AP_001544.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001140|IPR003439|IPR003593|IPR011527|IPR011917|IPR017871|IPR017940|IPR027417	AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter, integral membrane type 1|ABC transporter, lipid A export, MsbA|ABC transporter, transmembrane domain|ABC transporter, transmembrane domain, type 1|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase	GO:0000166|GO:0005524|GO:0006810|GO:0016021|GO:0016887|GO:0017111|GO:0034040|GO:0042626|GO:0055085	G3DSA:1.20.1560.10|G3DSA:3.40.50.300|PF00005|PF00664|PS00211|PS50893|PS50929|PS51239|PTHR24221|PTHR24221:SF50|SM00382|SSF52540|SSF90123|TIGR02203
mscL|mscL|AP_004500.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001185|IPR019823	Large-conductance mechanosensitive channel|Large-conductance mechanosensitive channel, conserved site	GO:0005216|GO:0006810|GO:0016021	MF_00115|PF01741|PR01264|PS01327|PTHR30266|PTHR30266:SF0|SSF81330|TIGR00220
mscS|mscS|AP_003482.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR006685|IPR006686|IPR008910|IPR010920|IPR011014|IPR011066	Conserved TM helix|Like-Sm (LSM) domain|Mechanosensitive ion channel MscS|Mechanosensitive ion channel MscS, C-terminal|Mechanosensitive ion channel MscS, conserved site|Mechanosensitive ion channel MscS, transmembrane-2	GO:0016020|GO:0055085	G3DSA:2.30.30.60|G3DSA:3.30.70.100|PF00924|PF05552|PS01246|PTHR30221|SSF50182|SSF82689|SSF82861
msrA|msrA|AP_004719.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002569	Peptide methionine sulphoxide reductase MsrA	GO:0008113|GO:0055114	G3DSA:3.30.1060.10|MF_01401|PF01625|PTHR10173|PTHR10173:SF6|SSF55068|TIGR00401
msyB|msyB|AP_001678.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR025729	MsyB protein		PF13984
mtgA|mtgA|AP_003751.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001264|IPR011812|IPR023346	Glycosyl transferase, family 51|Lysozyme-like domain|Monofunctional biosynthetic peptidoglycan transglycosylase	GO:0009252|GO:0009274|GO:0016021|GO:0016763	G3DSA:1.10.3810.10|MF_00766|PF00912|PTHR30400|PTHR30400:SF0|SSF53955|TIGR02070
mtlA|mtlA|AP_004193.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002178|IPR003352|IPR003501|IPR004718|IPR013011|IPR013014|IPR016152	Phosphotransferase system, EIIB component, type 2|Phosphotransferase system, EIIB component, type 2/3|Phosphotransferase system, EIIC|Phosphotransferase system, EIIC component, type 2|Phosphotransferase system, mannitol-specific enzyme IIC|Phosphotransferase system, phosphoenolpyruvate-dependent sugar EIIA 2|Phosphotransferase/anion transporter	GO:0005215|GO:0005351|GO:0006810|GO:0008982|GO:0009401|GO:0016020|GO:0016021	G3DSA:3.40.50.10370|G3DSA:3.40.930.10|PF00359|PF02302|PF02378|PS00372|PS51094|PS51099|PS51104|PTHR30181|PTHR30181:SF0|SSF52794|SSF55804|TIGR00851
mtlD|mtlD|AP_004192.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000669|IPR008927|IPR013118|IPR013131|IPR013328|IPR016040|IPR023027|IPR023028	6-phosphogluconate dehydrogenase, C-terminal-like|Dehydrogenase, multihelical|Mannitol dehydrogenase|Mannitol dehydrogenase, C-terminal|Mannitol dehydrogenase, N-terminal|Mannitol dehydrogenase, conserved site|Mannitol-1-phosphate 5-dehydrogenase|NAD(P)-binding domain	GO:0003824|GO:0008152|GO:0008926|GO:0016491|GO:0016616|GO:0019594|GO:0050662|GO:0055114	G3DSA:1.10.1040.10|G3DSA:3.40.50.720|MF_00196|PF01232|PF08125|PR00084|PS00974|PTHR30524|PTHR30524:SF0|SSF48179|SSF51735
mtlR|mtlR|AP_004191.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR007761	Mannitol repressor		G3DSA:1.20.120.330|PF05068|SSF158668
mtr|mtr|AP_003706.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002091|IPR013059|IPR013061|IPR018227	Aromatic amino acid permease|Tryptophan/tryrosine permease, conserved site|Tryptophan/tyrosine permease|Tryptophan/tyrosine transporter	GO:0005887|GO:0006865|GO:0015173|GO:0015801|GO:0016020	PF03222|PR00166|PS00594|PTHR32195|PTHR32195:SF5|TIGR00837
mukB|mukB|AP_001554.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR007406|IPR012090|IPR027417	Chromosome partition protein MukB|MukB, N-terminal domain|P-loop containing nucleoside triphosphate hydrolase	GO:0003677|GO:0005524|GO:0007059|GO:0009295|GO:0030261	G3DSA:3.40.1140.10|MF_01800|PF04310|PF13558|PIRSF005246|PTHR18937|PTHR18937:SF113|SSF52540
mukE|mukE|AP_001553.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR007385	Prokaryotic chromosome segregation/condensation protein MukE	GO:0005737|GO:0007059|GO:0030261	MF_01802|PF04288
mukF|mukF|AP_001552.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR005582|IPR011991	Chromosome partition protein MukF|Winged helix-turn-helix DNA-binding domain	GO:0005509|GO:0005737|GO:0006260|GO:0007059	G3DSA:1.10.10.10|MF_01803|PF03882|PIRSF018282|SSF140570|SSF46785
murA|murA|AP_003732.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001986|IPR005750|IPR013792	Enolpyruvate transferase domain|RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta|UDP-N-acetylglucosamine 1-carboxyvinyltransferase	GO:0003824|GO:0008760|GO:0016765|GO:0019277	G3DSA:3.65.10.10|MF_00111|PF00275|PTHR21090|PTHR21090:SF4|SSF55205|TIGR01072
murB|murB|AP_003842.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003170|IPR006094|IPR011601|IPR016166|IPR016167|IPR016169	CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2|FAD linked oxidase, N-terminal|FAD-binding, type 2|FAD-binding, type 2, subdomain 1|UDP-N-acetylenolpyruvoylglucosamine reductase|UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal	GO:0003824|GO:0008762|GO:0016491|GO:0016614|GO:0050660|GO:0055114	G3DSA:3.30.43.10|G3DSA:3.30.465.10|G3DSA:3.90.78.10|MF_00037|PF01565|PF02873|PS51387|PTHR21071|PTHR21071:SF0|SSF56176|SSF56194|TIGR00179
murC|murC|AP_000754.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000713|IPR004101|IPR005758|IPR013221|IPR016040	Mur ligase, C-terminal|Mur ligase, N-terminal|Mur ligase, central|NAD(P)-binding domain|UDP-N-acetylmuramate-alanine ligase	GO:0005524|GO:0005737|GO:0008360|GO:0008763|GO:0009058|GO:0016874|GO:0051301	G3DSA:3.40.1190.10|G3DSA:3.40.50.720|G3DSA:3.90.190.20|MF_00046|PF01225|PF02875|PF08245|PTHR23135|PTHR23135:SF5|SSF51984|SSF53244|SSF53623|TIGR01082
murD|murD|AP_000751.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004101|IPR005762|IPR013221|IPR016040	Mur ligase, C-terminal|Mur ligase, central|NAD(P)-binding domain|UDP-N-acetylmuramoylalanine-D-glutamate ligase	GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0009058|GO:0016874|GO:0051301	G3DSA:3.40.1190.10|G3DSA:3.40.50.720|G3DSA:3.90.190.20|MF_00639|PF02875|PF08245|PS51257|PTHR23135|PTHR23135:SF2|SSF51984|SSF53244|SSF53623|TIGR01087
murE|murE|AP_000748.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000713|IPR004101|IPR005761|IPR013221	Mur ligase, C-terminal|Mur ligase, N-terminal|Mur ligase, central|UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase	GO:0005524|GO:0005737|GO:0008360|GO:0009058|GO:0016874|GO:0016881|GO:0051301	G3DSA:3.40.1190.10|G3DSA:3.40.1390.10|G3DSA:3.90.190.20|MF_00208|PF01225|PF02875|PF08245|PTHR23135|PTHR23135:SF4|SSF53244|SSF53623|SSF63418|TIGR01085
murF|murF|AP_000749.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000713|IPR004101|IPR005863|IPR013221	Mur ligase, C-terminal|Mur ligase, N-terminal|Mur ligase, central|UDP-MurNAc-pentapeptide synthetase	GO:0005524|GO:0005737|GO:0008360|GO:0008766|GO:0009058|GO:0016874|GO:0051301	G3DSA:3.40.1190.10|G3DSA:3.40.1390.10|G3DSA:3.90.190.20|PF01225|PF02875|PF08245|PTHR23135|PTHR23135:SF3|SSF53244|SSF53623|SSF63418|TIGR01143
murG|murG|AP_000753.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004276|IPR006009|IPR007235	Glycosyl transferase, family 28|Glycosyl transferase, family 28, C-terminal|N-acetylglucosaminyltransferase, MurG	GO:0005975|GO:0016758|GO:0019277|GO:0030246|GO:0030259|GO:0050511	G3DSA:3.40.50.2000|MF_00033|PF03033|PF04101|PTHR21015|PTHR21015:SF22|SSF53756|TIGR01133
murI|murI|AP_003843.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001920|IPR004391|IPR015942|IPR018187	Asp/Glu racemase|Asp/Glu racemase, active site|Asp/Glu/hydantoin racemase|Glutamate racemase	GO:0006807|GO:0008152|GO:0008881|GO:0009252|GO:0016855|GO:0036361	G3DSA:3.40.50.1860|MF_00258|PF01177|PS00923|PS00924|PTHR21198|SSF53681|TIGR00067
murP|murP|AP_003023.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001996|IPR003352|IPR013013|IPR018113	Phosphotransferase system EIIB/cysteine, phosphorylation site|Phosphotransferase system, EIIB component, type 1|Phosphotransferase system, EIIC|Phosphotransferase system, EIIC component, type 1	GO:0005351|GO:0006810|GO:0008982|GO:0009401|GO:0016020	G3DSA:3.30.1360.60|PF00367|PF02378|PS01035|PS51098|PS51103|PTHR30175|PTHR30175:SF1|SSF55604
mutH|mutH|AP_003394.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004230|IPR011335|IPR011337	DNA mismatch repair MutH/Restriction endonuclease, type II|DNA mismatch repair protein MutH|Restriction endonuclease  type II-like	GO:0003677|GO:0004519|GO:0006304	G3DSA:3.40.600.10|MF_00759|PF02976|SM00927|SSF52980|TIGR02248
mutL|mutL|AP_004670.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002099|IPR003594|IPR013507|IPR014721|IPR014762|IPR014763|IPR014790|IPR020568|IPR020667	DNA mismatch repair protein|DNA mismatch repair protein, C-terminal|DNA mismatch repair protein, MutL|DNA mismatch repair protein, N-terminal|DNA mismatch repair, conserved site|Histidine kinase-like ATPase, ATP-binding domain|MutL, C-terminal, dimerisation|Ribosomal protein S5 domain 2-type fold|Ribosomal protein S5 domain 2-type fold, subgroup	GO:0005524|GO:0006298|GO:0030983	G3DSA:3.30.230.10|G3DSA:3.30.565.10|MF_00149|PF01119|PF08676|PF13589|PS00058|PTHR10073|PTHR10073:SF12|SM00387|SM00853|SSF118116|SSF54211|SSF55874|TIGR00585
mutM|mutM|AP_004156.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000191|IPR000214|IPR010663|IPR010979|IPR012319|IPR015886|IPR015887|IPR020629	DNA glycosylase/AP lyase|DNA glycosylase/AP lyase, H2TH DNA-binding|DNA glycosylase/AP lyase, catalytic domain|DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site|Formamidopyrimidine-DNA glycosylase|Ribosomal protein S13-like, H2TH|Zinc finger, DNA glycosylase/AP lyase-type|Zinc finger, DNA glycosylase/AP lyase/isoleucyl tRNA synthetase	GO:0003676|GO:0003677|GO:0003684|GO:0003824|GO:0003906|GO:0006281|GO:0006284|GO:0006289|GO:0008270|GO:0008534|GO:0016799	G3DSA:1.10.8.50|G3DSA:3.20.190.10|MF_00103|PF01149|PF06827|PF06831|PS01242|PS51066|PS51068|PTHR22993|SM00898|SSF46946|SSF57716|SSF81624|TIGR00577
mutS|mutS|AP_003300.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000432|IPR005748|IPR007695|IPR007696|IPR007860|IPR007861|IPR016151|IPR027417	DNA mismatch repair protein MutS, C-terminal|DNA mismatch repair protein MutS, N-terminal|DNA mismatch repair protein MutS, clamp|DNA mismatch repair protein MutS, connector domain|DNA mismatch repair protein MutS, core|DNA mismatch repair protein MutS, type 1|DNA mismatch repair protein MutS-like, N-terminal|P-loop containing nucleoside triphosphate hydrolase	GO:0005524|GO:0006298|GO:0030983	G3DSA:1.10.1420.10|G3DSA:3.30.420.110|G3DSA:3.40.1170.10|G3DSA:3.40.50.300|MF_00096|PF00488|PF01624|PF05188|PF05190|PF05192|PS00486|PTHR11361|PTHR11361:SF34|SM00533|SM00534|SSF48334|SSF52540|SSF53150|SSF55271|TIGR01070
mutT|mutT|AP_000762.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000086|IPR003561|IPR015797|IPR020084|IPR020476	Mutator MutT|NUDIX hydrolase|NUDIX hydrolase domain|NUDIX hydrolase domain-like|NUDIX hydrolase, conserved site	GO:0006281|GO:0008413|GO:0016787	G3DSA:3.90.79.10|PF00293|PR00502|PR01401|PS00893|PS51462|PTHR22769|PTHR22769:SF0|SSF55811|TIGR00586
mutY|mutY|AP_003518.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000445|IPR003265|IPR003583|IPR003651|IPR004035|IPR004036|IPR005760|IPR011257|IPR015797|IPR023170	A/G-specific adenine glycosylase MutY, bacterial form|DNA glycosylase|Endonuclease III, conserved site-2|Endonuclease III, iron-sulphur binding site|Endonuclease III-like, iron-sulphur cluster loop motif|Helix-hairpin-helix DNA-binding motif, class 1|Helix-hairpin-helix motif|Helix-turn-helix, base-excision DNA repair, C-terminal|HhH-GPD domain|NUDIX hydrolase domain-like	GO:0003677|GO:0003824|GO:0004519|GO:0005622|GO:0006281|GO:0006284|GO:0016787|GO:0019104|GO:0051539	G3DSA:1.10.1670.10|G3DSA:1.10.340.30|G3DSA:3.90.79.10|PF00633|PF00730|PF10576|PS00764|PS01155|PTHR10359|PTHR10359:SF1|SM00278|SM00478|SM00525|SSF48150|SSF55811|TIGR01084
mviM|mviM|AP_001694.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000683|IPR004104|IPR016040	NAD(P)-binding domain|Oxidoreductase, C-terminal|Oxidoreductase, N-terminal	GO:0008152|GO:0016491|GO:0055114	G3DSA:3.30.360.10|G3DSA:3.40.50.720|PF01408|PF02894|PTHR22604|PTHR22604:SF8|SSF51735|SSF55347
mviN|mviN|AP_001695.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004268	Flagellin assembly, membrane protein MviN		PF03023|PIRSF002869|PR01806|TIGR01695
nac|nac|AP_002590.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000847|IPR005119|IPR011991	LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain	GO:0003700|GO:0006355	G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PR00039|PS50931|PTHR30293|PTHR30293:SF0|SSF46785|SSF53850
nadA|nadA|AP_001381.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003473|IPR023513	Quinolinate synthase A, type 1|Quinolinate synthetase A	GO:0008987|GO:0009435|GO:0016765	MF_00567|PF02445|PTHR30573|SSF142754|TIGR00550
nadB|nadB|AP_003160.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003953|IPR005288|IPR013027|IPR015939|IPR027477	FAD binding domain|FAD-dependent pyridine nucleotide-disulphide oxidoreductase|Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal|L-aspartate oxidase|Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain	GO:0005737|GO:0008734|GO:0009435|GO:0016491|GO:0055114	G3DSA:1.20.58.100|G3DSA:3.50.50.60|G3DSA:3.90.700.10|PF00890|PF02910|PR00368|PR00411|PTHR11632|PTHR11632:SF6|SSF46977|SSF51905|SSF56425|TIGR00551
nadC|nadC|AP_000770.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002638|IPR004393|IPR013785|IPR022412|IPR027277	Aldolase-type TIM barrel|Nicotinate-nucleotide pyrophosphorylase|Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD|Quinolinate phosphoribosyl transferase, C-terminal|Quinolinate phosphoribosyl transferase, N-terminal	GO:0003824|GO:0004514|GO:0009435|GO:0016763|GO:0019363	G3DSA:3.20.20.70|G3DSA:3.90.1170.20|PF01729|PF02749|PIRSF006250|PTHR32496|PTHR32496:SF0|SSF51690|SSF54675|TIGR00078
nadD|nadD|AP_001288.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004821|IPR005248|IPR014729	Cytidyltransferase-like domain|Probable nicotinate-nucleotide adenylyltransferase|Rossmann-like alpha/beta/alpha sandwich fold	GO:0003824|GO:0009058|GO:0009435|GO:0016779	G3DSA:3.40.50.620|MF_00244|PF01467|PTHR12039|PTHR12039:SF0|SSF52374|TIGR00125|TIGR00482
nadE|nadE|AP_002359.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003694|IPR014729|IPR022310|IPR022926	NAD synthase|NAD/GMP synthase|NH(3)-dependent NAD(+) synthetase|Rossmann-like alpha/beta/alpha sandwich fold	GO:0003952|GO:0005524|GO:0008795|GO:0009435	G3DSA:3.40.50.620|MF_00193|PF02540|PTHR23090|PTHR23090:SF2|SSF52402|TIGR00552
nadR|nadR|AP_004878.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001387|IPR004821|IPR006417|IPR010982|IPR014729|IPR016429|IPR027417	Bifunctional transcriptional regulator NadR|Cytidyltransferase-like domain|Helix-turn-helix|Lambda repressor-like, DNA-binding domain|Nicotinamide-nucleotide adenylyltransferase|P-loop containing nucleoside triphosphate hydrolase|Rossmann-like alpha/beta/alpha sandwich fold	GO:0003677|GO:0003824|GO:0006355|GO:0006810|GO:0009058|GO:0019363|GO:0043565|GO:0045892	G3DSA:1.10.260.40|G3DSA:3.40.50.300|G3DSA:3.40.50.620|PF01381|PF13521|PIRSF004776|PS50943|SM00530|SSF47413|SSF52374|SSF52540|TIGR00125|TIGR01526
nagA|nagA|AP_001315.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003764|IPR006680|IPR011059	Amidohydrolase 1|Metal-dependent hydrolase, composite domain|N-acetylglucosamine-6-phosphate deacetylase	GO:0006044|GO:0008448|GO:0016787|GO:0016810	G3DSA:2.30.40.10|G3DSA:3.20.20.140|PF01979|PIRSF038994|PTHR11113|SSF51338|SSF51556|TIGR00221
nagB|nagB|AP_001316.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004547|IPR006148|IPR018321	Glucosamine-6-phosphate isomerase|Glucosamine-6-phosphate isomerase, conserved site|Glucosamine/galactosamine-6-phosphate isomerase	GO:0004342|GO:0005975|GO:0006044	G3DSA:3.40.50.1360|MF_01241|PF01182|PS01161|PTHR11280|PTHR11280:SF0|SSF100950|TIGR00502
nagC|nagC|AP_001314.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000600|IPR000835|IPR011991	ROK|Transcription regulator HTH, MarR-type|Winged helix-turn-helix DNA-binding domain	GO:0003700|GO:0005622|GO:0006355	G3DSA:1.10.10.10|G3DSA:3.30.420.40|PF00480|PF01047|PS01125|PTHR18964|PTHR18964:SF37|SSF46785|SSF53067
nagD|nagD|AP_001313.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR006357|IPR023214|IPR023215	HAD-like domain|HAD-superfamily hydrolase, subfamily IIA|Nitrophenylphosphatase-like  domain	GO:0008152|GO:0016787	G3DSA:3.40.50.1000|G3DSA:3.40.50.10410|PF00702|PTHR19288|PTHR19288:SF3|SSF56784|TIGR01460
nagE|nagE|AP_001317.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001127|IPR001996|IPR003352|IPR010974|IPR011055|IPR011535|IPR013013|IPR018113	Duplicated hybrid motif|Phosphotransferase system EIIB/cysteine, phosphorylation site|Phosphotransferase system, EIIB component, type 1|Phosphotransferase system, EIIC|Phosphotransferase system, EIIC component, type 1|Phosphotransferase system, N-acetylglucosamine-specific IIBC component|Phosphotransferase system, glucose-like IIB component|Phosphotransferase system, sugar-specific permease EIIA 1 domain	GO:0005351|GO:0006810|GO:0008982|GO:0009401|GO:0015572|GO:0016020|GO:0016021|GO:0019866	G3DSA:2.70.70.10|G3DSA:3.30.1360.60|PF00358|PF00367|PF02378|PS00371|PS01035|PS51093|PS51098|PS51103|PTHR30009|PTHR30009:SF1|SSF51261|SSF55604|TIGR00826|TIGR00830|TIGR01998
nagZ|nagZ|AP_001733.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001764|IPR017853|IPR019800|IPR022956	Beta-hexosaminidase, bacterial|Glycoside hydrolase, family 3, N-terminal|Glycoside hydrolase, family 3, active site|Glycoside hydrolase, superfamily	GO:0004553|GO:0004563|GO:0005975	G3DSA:3.20.20.300|MF_00364|PF00933|PS00775|PTHR30480|PTHR30480:SF1|SSF51445
nanA|nanA|AP_003767.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002220|IPR005264|IPR013785|IPR020624|IPR020625	Aldolase-type TIM barrel|Dihydrodipicolinate synthetase, active site|Dihydrodipicolinate synthetase, conserved site|Dihydrodipicolinate synthetase-like|N-acetylneuraminate lyase	GO:0003824|GO:0005737|GO:0005975|GO:0008152|GO:0008747|GO:0016829	G3DSA:3.20.20.70|MF_01237|PF00701|PIRSF001365|PR00146|PS00665|PS00666|PTHR12128|PTHR12128:SF10|SSF51569|TIGR00683
nanE|nanE|AP_003765.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR007260|IPR011060|IPR013785	Aldolase-type TIM barrel|Putative N-acetylmannosamine-6-phosphate epimerase|Ribulose-phosphate binding barrel	GO:0003824|GO:0006051|GO:0008152|GO:0047465	G3DSA:3.20.20.70|MF_01235|PF04131|SSF51366
nanK|nanK|AP_003764.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000600|IPR023945	N-acetylmannosamine kinase, bacterial|ROK	GO:0005524|GO:0008270|GO:0009384|GO:0019262	G3DSA:3.30.420.40|MF_01234|PF00480|PS01125|PTHR18964|PTHR18964:SF19|SSF53067
nanR|nanR|AP_003768.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000524|IPR008920|IPR011711|IPR011991|IPR023730|IPR027376	FadR/GntR C-terminal domain|Fatty acid responsive transcription factor FadR, C-terminal|GntR, C-terminal|Transcription regulator HTH, GntR|Transcriptional regulator NanR|Winged helix-turn-helix DNA-binding domain	GO:0000062|GO:0003677|GO:0003700|GO:0005622|GO:0006355|GO:0019217	G3DSA:1.10.10.10|G3DSA:1.20.120.530|MF_01236|PF00392|PF07729|PR00035|PS50949|PTHR11751|SM00345|SM00895|SSF46785|SSF48008
nanT|nanT|AP_003766.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004742|IPR005828|IPR011701|IPR016196|IPR020846	General substrate transporter|Major facilitator superfamily|Major facilitator superfamily domain|Major facilitator superfamily domain, general substrate transporter|Sialic acid transporter	GO:0015144|GO:0016021|GO:0022857|GO:0034219|GO:0055085	G3DSA:1.20.1250.20|MF_01238|PF00083|PF07690|PS50850|PTHR24003|SSF103473|TIGR00891
napA|napA|AP_002802.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR006311|IPR006656|IPR006657|IPR006963|IPR009010|IPR010051|IPR019546|IPR027467	Aspartate decarboxylase-like domain|Molybdopterin oxidoreductase|Molybdopterin oxidoreductase, 4Fe-4S domain|Molybdopterin oxidoreductase, molybdopterin cofactor binding site|Molydopterin dinucleotide-binding domain|Periplasmic nitrate reductase, large subunit|Twin-arginine translocation pathway, signal sequence|Twin-arginine translocation pathway, signal sequence, bacterial/archaeal	GO:0008940|GO:0016491|GO:0030151|GO:0042128|GO:0042597|GO:0051539|GO:0055114	G3DSA:2.20.25.90|G3DSA:2.40.40.20|G3DSA:3.40.228.10|G3DSA:3.40.50.740|MF_01630|PF00384|PF01568|PF04879|PS00551|PS51318|PTHR11615|PTHR11615:SF38|SM00926|SSF50692|SSF53706|TIGR01409|TIGR01706
napB|napB|AP_002799.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR005591|IPR011031|IPR027406	Multihaem cytochrome|Nitrate reductase cytochrome c-type subunit NapB|Periplasmic nitrate reductase NapB subunit, heme binding domain		G3DSA:4.10.1020.10|PF03892|PIRSF006105|PS51008|SSF48695
napC|napC|AP_002798.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR005126|IPR011031|IPR011885|IPR024717	Denitrification system component NapC/NirT/NrfH|Multihaem cytochrome|NapC/NirT cytochrome c, N-terminal|Periplasmic nitrate reductase c-type cytochrome, NapC/NirT	GO:0016021|GO:0019333|GO:0020037	G3DSA:1.10.3820.10|PF03264|PIRSF000013|PS51008|PTHR30333|PTHR30333:SF0|SSF48695|TIGR02161
napD|napD|AP_002803.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR005623	Chaperone NapD, nitrate reductase assembly		PF03927
napF|napF|AP_002804.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001450|IPR004496|IPR017896	4Fe-4S binding domain|4Fe-4S ferredoxin-type, iron-sulpur binding domain|Ferredoxin-type protein NapF	GO:0005506|GO:0009055|GO:0051536	G3DSA:3.30.70.20|PF12838|PF13187|SSF54862|TIGR00402
napG|napG|AP_002801.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001450|IPR004494|IPR006311|IPR012285|IPR017896|IPR017900	4Fe-4S binding domain|4Fe-4S ferredoxin, iron-sulphur binding, conserved site|4Fe-4S ferredoxin-type, iron-sulpur binding domain|Fumarate reductase, C-terminal|MauM/NapG ferredoxin-type protein|Twin-arginine translocation pathway, signal sequence	GO:0009055|GO:0016491|GO:0051536|GO:0055114	G3DSA:1.10.1060.10|G3DSA:3.30.70.20|PF00037|PF12800|PS00198|PS51318|PS51379|SSF54862|TIGR00397
napH|napH|AP_002800.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001450|IPR011886|IPR017896|IPR017900	4Fe-4S binding domain|4Fe-4S ferredoxin, iron-sulphur binding, conserved site|4Fe-4S ferredoxin-type, iron-sulpur binding domain|Ferredoxin-type protein, NapH/MauN family	GO:0005506|GO:0009055|GO:0051536	G3DSA:3.30.70.20|PF12801|PF12837|PS00198|PS51379|PTHR30176|SSF54862|TIGR02163
narG|narG|AP_001852.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR006468|IPR006655|IPR006656|IPR006657|IPR006963|IPR009010|IPR027467	Aspartate decarboxylase-like domain|Molybdopterin oxidoreductase|Molybdopterin oxidoreductase, 4Fe-4S domain|Molybdopterin oxidoreductase, molybdopterin cofactor binding site|Molybdopterin oxidoreductase, prokaryotic, conserved site|Molydopterin dinucleotide-binding domain|Nitrate reductase, alpha subunit	GO:0008940|GO:0009055|GO:0009325|GO:0016491|GO:0030151|GO:0042126|GO:0051539|GO:0055114	G3DSA:2.20.25.90|G3DSA:2.40.40.20|G3DSA:3.40.228.10|G3DSA:3.40.50.740|G3DSA:3.90.55.10|G3DSA:4.10.1200.10|PF00384|PF01568|PS00490|PS00551|PS00932|PTHR11615|PTHR11615:SF35|SM00926|SSF50692|SSF53706|TIGR01580
narH|narH|AP_001853.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR006547|IPR017896	4Fe-4S ferredoxin-type, iron-sulpur binding domain|Nitrate reductase, beta subunit	GO:0008940|GO:0009325|GO:0042126|GO:0051536|GO:0055114	G3DSA:1.10.3650.10|G3DSA:3.30.70.20|PF13247|PS51379|PTHR11938|PTHR11938:SF8|SSF54862|TIGR01660
narI|narI|AP_001855.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003816|IPR023234	NarG-like domain|Nitrate reductase, gamma subunit	GO:0008940|GO:0009325|GO:0055114	G3DSA:1.20.950.20|PF02665|PTHR30598|SSF103501|TIGR00351
narJ|narJ|AP_001854.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003765|IPR020945	DMSO/Nitrate reductase chaperone|Nitrate reductase chaperone, NarJ	GO:0051082|GO:0051131	G3DSA:1.10.3480.10|PF02613|PTHR30598|SSF89155|TIGR00684
narK|narK|AP_001851.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004737|IPR011701|IPR016196	Major facilitator superfamily|Major facilitator superfamily domain, general substrate transporter|Nitrate transporter	GO:0015112|GO:0015113|GO:0015706|GO:0015707|GO:0016021|GO:0055085	G3DSA:1.20.1250.20|PF07690|PTHR24003|PTHR24003:SF115|SSF103473|TIGR00886
narL|narL|AP_001849.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000792|IPR001789|IPR011006|IPR011991|IPR016032	CheY-like superfamily|Signal transduction response regulator, C-terminal effector|Signal transduction response regulator, receiver domain|Transcription regulator LuxR, C-terminal|Winged helix-turn-helix DNA-binding domain	GO:0000156|GO:0000160|GO:0003677|GO:0003700|GO:0005622|GO:0006355|GO:0043565	G3DSA:1.10.10.10|G3DSA:3.40.50.2300|PF00072|PF00196|PR00038|PS00622|PS50043|PS50110|PTHR26402|SM00421|SM00448|SSF46894|SSF52172
narP|narP|AP_002789.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000792|IPR001789|IPR011006|IPR011991|IPR016032	CheY-like superfamily|Signal transduction response regulator, C-terminal effector|Signal transduction response regulator, receiver domain|Transcription regulator LuxR, C-terminal|Winged helix-turn-helix DNA-binding domain	GO:0000156|GO:0000160|GO:0003677|GO:0003700|GO:0005622|GO:0006355|GO:0043565	G3DSA:1.10.10.10|G3DSA:3.40.50.2300|PF00072|PF00196|PR00038|PTHR26402|SM00421|SM00448|SSF46894|SSF52172
narQ|narQ|AP_003054.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003594|IPR003660|IPR005467|IPR011712|IPR016380	HAMP linker domain|Histidine kinase-like ATPase, ATP-binding domain|Signal transduction histidine kinase, core|Signal transduction histidine kinase, nitrate/nitrite-sensing|Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain	GO:0000155|GO:0000160|GO:0004673|GO:0004871|GO:0005524|GO:0007165|GO:0016021|GO:0046983	G3DSA:3.30.565.10|PF00672|PF02518|PF07730|PF13675|PIRSF003167|PS50109|PS50885|PTHR24423|PTHR24423:SF119|SM00304|SM00387|SSF158472|SSF55874
narU|narU|AP_002092.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004737|IPR011701|IPR016196	Major facilitator superfamily|Major facilitator superfamily domain, general substrate transporter|Nitrate transporter	GO:0015112|GO:0015113|GO:0015706|GO:0015707|GO:0016021|GO:0055085	G3DSA:1.20.1250.20|PF07690|PTHR24003|PTHR24003:SF115|SSF103473|TIGR00886
narV|narV|AP_002088.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003816|IPR023234	NarG-like domain|Nitrate reductase, gamma subunit	GO:0008940|GO:0009325|GO:0055114	G3DSA:1.20.950.20|PF02665|PTHR30598|SSF103501|TIGR00351
narW|narW|AP_002089.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003765|IPR020945	DMSO/Nitrate reductase chaperone|Nitrate reductase chaperone, NarJ	GO:0051082|GO:0051131	PF02613|PTHR30598|SSF89155|TIGR00684
narX|narX|AP_001850.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003594|IPR003660|IPR003661|IPR005467|IPR011712|IPR016380	HAMP linker domain|Histidine kinase-like ATPase, ATP-binding domain|Signal transduction histidine kinase, core|Signal transduction histidine kinase, nitrate/nitrite-sensing|Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain	GO:0000155|GO:0000160|GO:0004673|GO:0004871|GO:0005524|GO:0007165|GO:0016020|GO:0016021|GO:0046983	G3DSA:3.30.565.10|PF00672|PF02518|PF07730|PF13675|PIRSF003167|PS50109|PS50885|PTHR24423|PTHR24423:SF119|SM00304|SM00387|SM00388|SSF158472|SSF55874
narY|narY|AP_002090.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR006547|IPR017896	4Fe-4S ferredoxin-type, iron-sulpur binding domain|Nitrate reductase, beta subunit	GO:0008940|GO:0009325|GO:0042126|GO:0051536|GO:0055114	G3DSA:1.10.3650.10|G3DSA:3.30.70.20|PF13247|PS51379|PTHR11938|PTHR11938:SF8|SSF54862|TIGR01660
narZ|narZ|AP_002091.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR006468|IPR006655|IPR006656|IPR006657|IPR006963|IPR009010|IPR027467	Aspartate decarboxylase-like domain|Molybdopterin oxidoreductase|Molybdopterin oxidoreductase, 4Fe-4S domain|Molybdopterin oxidoreductase, molybdopterin cofactor binding site|Molybdopterin oxidoreductase, prokaryotic, conserved site|Molydopterin dinucleotide-binding domain|Nitrate reductase, alpha subunit	GO:0008940|GO:0009055|GO:0009325|GO:0016491|GO:0030151|GO:0042126|GO:0051539|GO:0055114	G3DSA:2.20.25.90|G3DSA:2.40.40.20|G3DSA:3.40.228.10|G3DSA:3.40.50.740|G3DSA:3.90.55.10|G3DSA:4.10.1200.10|PF00384|PF01568|PS00490|PS00551|PS00932|PTHR11615|PTHR11615:SF35|SM00926|SSF50692|SSF53706|TIGR01580
ndh|ndh|AP_001735.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001327|IPR013027|IPR023753	FAD-dependent pyridine nucleotide-disulphide oxidoreductase|Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain|Pyridine nucleotide-disulphide oxidoreductase, NAD-binding domain	GO:0016491|GO:0050660|GO:0055114	G3DSA:3.50.50.60|PF00070|PF07992|PR00368|PR00411|PTHR22915|PTHR22915:SF4|SSF51905
ndk|ndk|AP_003104.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001564|IPR023005	Nucleoside diphosphate kinase|Nucleoside diphosphate kinase, active site	GO:0004550|GO:0005524|GO:0006165|GO:0006183|GO:0006228|GO:0006241	G3DSA:3.30.70.141|MF_00451|PF00334|PR01243|PS00469|PTHR11349|SM00562|SSF54919
nei|nei|AP_001352.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000214|IPR010663|IPR010979|IPR012319|IPR015886|IPR015887|IPR023713	DNA glycosylase/AP lyase, H2TH DNA-binding|DNA glycosylase/AP lyase, catalytic domain|DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site|Endonuclease VIII|Ribosomal protein S13-like, H2TH|Zinc finger, DNA glycosylase/AP lyase-type|Zinc finger, DNA glycosylase/AP lyase/isoleucyl tRNA synthetase	GO:0003676|GO:0003677|GO:0003684|GO:0003824|GO:0003906|GO:0004519|GO:0006281|GO:0006284|GO:0006289|GO:0008270|GO:0016799	G3DSA:1.10.8.50|G3DSA:3.20.190.10|MF_01253|PF01149|PF06827|PF06831|PS01242|PS51066|PS51068|PTHR22993|SM00898|SSF46946|SSF57716|SSF81624
nemA|nemA|AP_002272.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001155|IPR013785	Aldolase-type TIM barrel|NADH:flavin oxidoreductase/NADH oxidase, N-terminal	GO:0003824|GO:0010181|GO:0016491|GO:0055114	G3DSA:3.20.20.70|PF00724|PTHR22893|PTHR22893:SF24|SSF51395
nfi|nfi|AP_003820.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR007581	Endonuclease V	GO:0004519|GO:0006281	MF_00801|PF04493
nfnB|nfnB|AP_001223.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000415	Nitroreductase-like	GO:0016491	G3DSA:3.40.109.10|PF00881|PTHR23026|PTHR23026:SF43|SSF55469
nfo|nfo|AP_002756.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001719|IPR013022|IPR018246	AP endonuclease, family 2, zinc binding site|Endodeoxyribonuclease IV|Xylose isomerase-like, TIM barrel domain	GO:0003677|GO:0004519|GO:0005622|GO:0006281|GO:0008270	G3DSA:3.20.20.150|MF_00152|PF01261|PS00729|PS00730|PS00731|PS51432|PTHR21445|SM00518|SSF51658|TIGR00587
nfrA|nfrA|AP_001213.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR011990|IPR013026|IPR019734|IPR025137	Bacteriophage N4 adsorption protein A, C-terminal|Tetratricopeptide repeat|Tetratricopeptide repeat-containing domain|Tetratricopeptide-like helical	GO:0005515	G3DSA:1.25.40.10|PF13283|PF13429|PS50005|PS50293|SSF48452
nfrB|nfrB|AP_001214.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR007831	General secretory system II, protein E, N-terminal	GO:0005524|GO:0006810	PF05157|PF13632|PTHR30258|PTHR30258:SF1|SSF160246|SSF53448
nfsA|nfsA|AP_001482.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000415|IPR016446	Nitro/flavin reductase|Nitroreductase-like	GO:0016491|GO:0055114	G3DSA:3.40.109.10|PF00881|PIRSF005426|PTHR23026|PTHR23026:SF46|SSF55469
nhaA|nhaA|AP_000683.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004670|IPR023171	Na+/H+ antiporter NhaA|Na/H antiporter domain	GO:0006814|GO:0006885|GO:0016021	G3DSA:1.20.1530.10|MF_01844|PF06965|PTHR30341|PTHR30341:SF0|TIGR00773
nhaB|nhaB|AP_001811.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004671	Na+/H+ antiporter NhaB	GO:0006814|GO:0015385|GO:0016021	MF_01599|PF06450|PTHR10283|PTHR10283:SF60|TIGR00774
nhaR|nhaR|AP_000684.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000847|IPR005119|IPR011991	LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain	GO:0003700|GO:0006355	G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PS50931|PTHR30293|PTHR30293:SF0|SSF46785|SSF53850
nhoA|nhoA|AP_002086.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001447	Arylamine N-acetyltransferase	GO:0008152|GO:0016407	G3DSA:3.30.2140.10|PF00797|PR01543|PTHR11786|SSF54001
nikA|nikA|AP_004316.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000914|IPR011980|IPR023765	Bacterial extracellular solute-binding protein, family 5|Bacterial extracellular solute-binding protein, family 5, conserved site|Nickel ABC transporter, periplasmic nickel-binding	GO:0005215|GO:0006810|GO:0015675|GO:0016151|GO:0020037	G3DSA:3.10.105.10|G3DSA:3.40.190.10|PF00496|PIRSF002741|PS01040|PTHR30290|PTHR30290:SF0|SSF53850|TIGR02294
nikB|nikB|AP_004315.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000515|IPR014156	Binding-protein-dependent transport systems inner membrane component|Nickel ABC transporter, permease subunit NikB	GO:0005215|GO:0006810|GO:0015099|GO:0016020|GO:0035444	G3DSA:1.10.3720.10|PF00528|PS50928|PTHR30465|PTHR30465:SF3|SSF161098|TIGR02789
nikC|nikC|AP_004314.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000515|IPR014157	Binding-protein-dependent transport systems inner membrane component|Nickel ABC transporter, permease subunit NikC	GO:0005215|GO:0006810|GO:0015099|GO:0016020|GO:0016021	G3DSA:1.10.3720.10|PF00528|PS50928|PTHR30465|PTHR30465:SF2|SSF161098|TIGR02790
nikD|nikD|AP_004313.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003439|IPR003593|IPR014138|IPR015857|IPR017871|IPR027417	AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter, nickel import, NikD|ABC transporter-like|Nickel import ATP-binding protein NikD|P-loop containing nucleoside triphosphate hydrolase	GO:0000166|GO:0005524|GO:0005886|GO:0015413|GO:0015675|GO:0016020|GO:0016151|GO:0016887|GO:0017111	G3DSA:3.40.50.300|PF00005|PS00211|PS50893|PS51247|PTHR24220|PTHR24220:SF178|SM00382|SSF52540|TIGR02770
nikE|nikE|AP_004312.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003439|IPR003593|IPR014137|IPR015858|IPR017871|IPR027417	AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter, nickel import, NikE|ABC transporter-like|Nickel import ATP-binding protein NikE|P-loop containing nucleoside triphosphate hydrolase	GO:0000166|GO:0005524|GO:0005886|GO:0015413|GO:0015675|GO:0016020|GO:0016151|GO:0016887|GO:0017111	G3DSA:3.40.50.300|PF00005|PS00211|PS50893|PS51248|PTHR24220|PTHR24220:SF81|SM00382|SSF52540|TIGR02769
nikR|nikR|AP_004311.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002145|IPR010985|IPR013321|IPR014160|IPR014864|IPR022988	Arc-type ribbon-helix-helix|Nickel-responsive transcriptional regulator NikR|Nickel-responsive transcriptional regulator NikR, proteobacteria|Ribbon-helix-helix|Ribbon-helix-helix protein, copG|Transcription factor, NikR, nickel binding C-terminal	GO:0003677|GO:0006355|GO:0010045|GO:0016151	G3DSA:1.10.1220.10|G3DSA:3.30.70.1150|MF_00476|PF01402|PF08753|SSF47598|SSF55021|TIGR02793
nirB|nirB|AP_004424.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001327|IPR005117|IPR006066|IPR006067|IPR007419|IPR012744|IPR013027|IPR017121|IPR023753	BFD-like [2Fe-2S]-binding domain|FAD-dependent pyridine nucleotide-disulphide oxidoreductase|Nitrite reductase [NAD(P)H] large subunit, NirB|Nitrite reductase [NAD(P)H], large subunit|Nitrite/Sulfite reductase ferredoxin-like domain|Nitrite/sulphite reductase 4Fe-4S domain|Nitrite/sulphite reductase iron-sulphur/siroheam-binding site|Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain|Pyridine nucleotide-disulphide oxidoreductase, NAD-binding domain	GO:0008942|GO:0016491|GO:0020037|GO:0042128|GO:0050660|GO:0050661|GO:0051536|GO:0055114	G3DSA:3.30.413.10|G3DSA:3.50.50.60|PF00070|PF01077|PF03460|PF04324|PF07992|PIRSF037149|PR00368|PR00397|PR00411|PS00365|PTHR22912|PTHR22912:SF1|SSF51905|SSF55124|SSF56014|TIGR02374
nirC|nirC|AP_004422.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000292|IPR023271|IPR024002	Aquaporin-like|Formate/nitrite transporter|Formate/nitrite transporter, conserved site	GO:0005215|GO:0006810|GO:0016020	G3DSA:1.20.1080.10|PF01226|PS01005|PS01006|PTHR30520|PTHR30520:SF0|TIGR00790
nirD|nirD|AP_004423.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR012748|IPR017881|IPR017941	Nitrite reductase [NAD(P)H] large subunit, NirD|Nitrite reductase [NAD(P)H] large subunit, NirD bacterial-type|Rieske [2Fe-2S] iron-sulphur domain	GO:0008942|GO:0016491|GO:0042128|GO:0051537|GO:0055114	G3DSA:2.102.10.10|PF13806|PS51300|SSF50022|TIGR02378
nlpA|nlpA|AP_004132.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004872	Lipoprotein NlpA family		G3DSA:3.40.190.10|PF03180|PIRSF002854|PS51257|PTHR30429|PTHR30429:SF0|SSF53850|TIGR00363
nlpB|nlpB|AP_003063.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR010653|IPR014524	Lipoprotein, NlpB|Outer membrane protein assembly factor BamC		MF_00924|PF06804|PIRSF026343|PS51257
nlpC|nlpC|AP_002328.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000064	Endopeptidase, NLPC/P60 domain		G3DSA:3.90.1720.10|PF00877|PS51257|PTHR21666|PTHR21666:SF1|SSF54001
nlpD|nlpD|AP_003309.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002482|IPR011055|IPR016047|IPR018392	Duplicated hybrid motif|Peptidase M23|Peptidoglycan-binding Lysin subgroup|Peptidoglycan-binding lysin domain	GO:0016998	G3DSA:2.70.70.10|G3DSA:3.10.350.10|PF01476|PF01551|PS51257|PTHR21666|PTHR21666:SF45|SM00257|SSF51261
nlpE|nlpE|AP_000853.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR007298	Copper resistance lipoprotein NlpE		PF04170|PS51257
nlpI|nlpI|AP_003708.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001440|IPR011990|IPR013026|IPR013105|IPR019734|IPR023605	Lipoprotein NlpI|Tetratricopeptide TPR-1|Tetratricopeptide TPR2|Tetratricopeptide repeat|Tetratricopeptide repeat-containing domain|Tetratricopeptide-like helical	GO:0005515	G3DSA:1.25.40.10|PF00515|PF07719|PIRSF004654|PS50005|PS50293|PS51257|PTHR23083|SM00028|SSF48452
nohA|nohA|AP_002169.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR009061|IPR010906|IPR011991	Bacteriophage lambda, Nu1, terminase small subunit|DNA binding domain, putative|Winged helix-turn-helix DNA-binding domain	GO:0000166	G3DSA:1.10.10.10|PF07471|SSF46955
nohB|nohB|AP_001206.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR009061|IPR010906|IPR011991	Bacteriophage lambda, Nu1, terminase small subunit|DNA binding domain, putative|Winged helix-turn-helix DNA-binding domain	GO:0000166	G3DSA:1.10.10.10|PF07471|SSF46955
norR|norR|AP_003276.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002078|IPR003018|IPR003593|IPR009057|IPR023944|IPR025662|IPR025943|IPR025944|IPR027417	AAA+ ATPase domain|Anaerobic nitric oxide reductase transcription regulator|GAF domain|Homeodomain-like|P-loop containing nucleoside triphosphate hydrolase|RNA polymerase sigma factor 54 interaction domain|Sigma-54 interaction domain, ATP-binding site 1|Sigma-54 interaction domain, ATP-binding site 2|Sigma-54 interaction domain, conserved site	GO:0000166|GO:0003677|GO:0003700|GO:0005515|GO:0005524|GO:0006355|GO:0008134|GO:0017111	G3DSA:1.10.10.60|G3DSA:1.10.8.60|G3DSA:3.30.450.40|G3DSA:3.40.50.300|MF_01314|PF00158|PF01590|PS00675|PS00676|PS00688|PS50045|PTHR10919|PTHR10919:SF2|SM00065|SM00382|SSF46689|SSF52540|SSF55781
norV|norV|AP_003277.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001279|IPR004039|IPR008254|IPR016440|IPR023957|IPR024934|IPR024935	Anaerobic nitric oxide reductase flavorubredoxin|Beta-lactamase-like|Flavodoxin/nitric oxide synthase|Rubredoxin domain|Rubredoxin-like domain|Rubredoxin-oxygen oxidoreductase|Rubredoxin-type fold	GO:0005506|GO:0009055|GO:0010181|GO:0016491|GO:0016787|GO:0016966|GO:0046872	G3DSA:2.20.28.10|G3DSA:3.40.50.360|G3DSA:3.60.15.10|MF_01312|PF00258|PF00301|PF00753|PIRSF005243|PR00163|PS50902|PS50903|PTHR32145|PTHR32145:SF1|SM00849|SSF52218|SSF56281|SSF57802
norW|norW|AP_003278.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001327|IPR013027|IPR023753|IPR023961	FAD-dependent pyridine nucleotide-disulphide oxidoreductase|Nitric oxide reductase FlRd-NAD(+) reductase|Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain|Pyridine nucleotide-disulphide oxidoreductase, NAD-binding domain	GO:0016491|GO:0016731|GO:0050660|GO:0055114	G3DSA:3.50.50.60|MF_01313|PF00070|PF07992|PR00368|PR00411|PTHR22912|PTHR22912:SF1|SSF51905
npr|npr|AP_003749.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000032|IPR001020|IPR002114|IPR005698	Phosphotransferase system, HPr histidine phosphorylation site|Phosphotransferase system, HPr serine phosphorylation site|Phosphotransferase system, phosphocarrier HPr protein|Phosphotransferase system, phosphocarrier HPr protein-like	GO:0005351|GO:0006810|GO:0009401	G3DSA:3.30.1340.10|PF00381|PR00107|PS00369|PS00589|PS51350|SSF55594|TIGR01003
nrdA|nrdA|AP_002831.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000788|IPR005144|IPR008926|IPR013346|IPR013509	ATP-cone|Ribonucleotide reductase R1 subunit, N-terminal|Ribonucleotide reductase large subunit, C-terminal|Ribonucleotide reductase large subunit, N-terminal|Ribonucleotide reductase, class I , alpha subunit	GO:0004748|GO:0005524|GO:0005971|GO:0006260|GO:0055114	G3DSA:3.20.70.20|PF00317|PF02867|PF03477|PR01183|PS00089|PS51161|PTHR11573|PTHR11573:SF5|SSF48168|SSF51998|TIGR02506
nrdB|nrdB|AP_002832.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000358|IPR009078|IPR012348	Ferritin-like superfamily|Ribonucleotide reductase small subunit|Ribonucleotide reductase-related	GO:0009186|GO:0016491|GO:0046914|GO:0055114	G3DSA:1.10.620.20|PF00268|PS00368|PTHR23409|PTHR23409:SF16|SSF47240
nrdD|nrdD|AP_004736.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001150|IPR005144|IPR012833|IPR019777	ATP-cone|Formate C-acetyltransferase glycine radical, conserved site|Glycine radical domain|Ribonucleoside-triphosphate reductase, anaerobic	GO:0003824|GO:0006260|GO:0008152|GO:0008998|GO:0016491|GO:0055114	G3DSA:3.20.70.20|PF03477|PF13597|PS00850|PS51149|PS51161|PTHR21075|SSF51998|TIGR02487
nrdE|nrdE|AP_003248.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000788|IPR008926|IPR013346|IPR013509|IPR013554|IPR026459	Ribonucleotide reductase N-terminal|Ribonucleotide reductase R1 subunit, N-terminal|Ribonucleotide reductase large subunit, C-terminal|Ribonucleotide reductase large subunit, N-terminal|Ribonucleotide reductase, class 1b, subunit NrdE|Ribonucleotide reductase, class I , alpha subunit	GO:0004748|GO:0005524|GO:0005971|GO:0006260|GO:0055114	G3DSA:3.20.70.20|PF00317|PF02867|PF08343|PR01183|PS00089|PTHR11573|PTHR11573:SF4|SSF48168|SSF51998|TIGR02506|TIGR04170
nrdF|nrdF|AP_003249.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000358|IPR009078|IPR012348|IPR026023|IPR026494	Ferritin-like superfamily|Ribonucleotide reductase small subunit|Ribonucleotide reductase small subunit, prokaryotic|Ribonucleotide reductase, class 1b, subunit NrdF|Ribonucleotide reductase-related	GO:0005971|GO:0009186|GO:0009263|GO:0016491|GO:0046914|GO:0055114	G3DSA:1.10.620.20|PF00268|PIRSF000355|PS00368|PTHR23409|PTHR23409:SF5|SSF47240|TIGR04171
nrdG|nrdG|AP_004735.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001989|IPR012837|IPR013785	Aldolase-type TIM barrel|Radical-activating enzyme, conserved site|Ribonucleoside-triphosphate reductase activating, anaerobic	GO:0003824|GO:0005737|GO:0016491|GO:0043365|GO:0051539|GO:0055114	G3DSA:3.20.20.70|PF13353|PIRSF000368|PS01087|SSF102114|TIGR02491
nrdH|nrdH|AP_003246.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002109|IPR011909|IPR012336	Glutaredoxin|Glutaredoxin-like protein NrdH|Thioredoxin-like fold	GO:0009055|GO:0015035|GO:0045454	G3DSA:3.40.30.10|PF00462|PS51354|SSF52833|TIGR02194
nrdI|nrdI|AP_003247.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004465|IPR020852	Ribonucleotide reductase Class Ib, NrdI|Ribonucleotide reductase, class Ib, NrdI, bacterial		G3DSA:3.40.50.360|MF_00128|PF07972|PIRSF005087|SSF52218|TIGR00333
nrfA|nrfA|AP_004571.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003321|IPR011031|IPR017570|IPR023155	Cytochrome c-552/4|Cytochrome c552|Formate-dependent cytochrome c nitrite reductase, c552 subunit|Multihaem cytochrome	GO:0005509|GO:0006807|GO:0020037|GO:0042279|GO:0042597|GO:0055114	G3DSA:1.10.710.10|G3DSA:1.20.140.10|MF_01182|PF02335|PIRSF000243|PS51008|PTHR30633|SSF48695|TIGR03152
nrfB|nrfB|AP_004572.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR010177|IPR011031|IPR017564	Cytochrome c nitrite reductase, pentahaem subunit|Doubled CXXCH motif|Multihaem cytochrome	GO:0006807|GO:0020037|GO:0042597	G3DSA:1.10.3820.10|PF09699|PS51008|SSF48695|TIGR03146
nrfC|nrfC|AP_004573.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001450|IPR006311|IPR017567|IPR017896|IPR017900|IPR019546	4Fe-4S binding domain|4Fe-4S ferredoxin, iron-sulphur binding, conserved site|4Fe-4S ferredoxin-type, iron-sulpur binding domain|Cytochrome c nitrite reductase, Fe-S protein|Twin-arginine translocation pathway, signal sequence|Twin-arginine translocation pathway, signal sequence, bacterial/archaeal	GO:0009055|GO:0051536	G3DSA:3.30.70.20|PF12797|PF13247|PS00198|PS51318|PS51379|PTHR11938|PTHR11938:SF10|SSF54862|TIGR01409|TIGR03149
nrfD|nrfD|AP_004574.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR005614|IPR017566	NrfD|NrfD family		G3DSA:1.20.1630.10|PF03916|TIGR03148
nrfE|nrfE|AP_004575.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002541|IPR003567|IPR003568|IPR003570	Cytochrome c assembly protein|Cytochrome c-type biogenesis protein|Cytochrome c-type biogenesis protein CcmF|Cytochrome c-type biogenesis protein NrfE	GO:0006461|GO:0008535|GO:0015232|GO:0015886|GO:0016020|GO:0017004	PF01578|PR01410|PR01413|PTHR30009|PTHR30009:SF0|TIGR00353
nrfF|nrfF|AP_004576.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR005616|IPR017565	Cytochrome C biogenesis protein CcmH|Formate-dependent nitrite reductase complex, subunit NrfF		PF03918|PTHR30009|TIGR03147
nrfG|nrfG|AP_004577.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001440|IPR011990|IPR013026|IPR013105|IPR019734|IPR026930	Formate-dependent nitrite reductase complex subunit nrfG|Tetratricopeptide TPR-1|Tetratricopeptide TPR2|Tetratricopeptide repeat|Tetratricopeptide repeat-containing domain|Tetratricopeptide-like helical	GO:0005515	G3DSA:1.25.40.10|PF00515|PF07719|PS50005|PS50293|PTHR26312|PTHR26312:SF27|SSF48452
nth|nth|AP_002255.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000445|IPR003265|IPR003583|IPR003651|IPR004035|IPR004036|IPR005759|IPR011257|IPR023170	DNA glycosylase|Endonuclease III, conserved site-2|Endonuclease III, iron-sulphur binding site|Endonuclease III-like, iron-sulphur cluster loop motif|Endonuclease III/Nth|Helix-hairpin-helix DNA-binding motif, class 1|Helix-hairpin-helix motif|Helix-turn-helix, base-excision DNA repair, C-terminal|HhH-GPD domain	GO:0003677|GO:0003824|GO:0003906|GO:0004519|GO:0006281|GO:0006284|GO:0051539	G3DSA:1.10.1670.10|G3DSA:1.10.340.30|PF00633|PF00730|PF10576|PIRSF001435|PS00764|PS01155|PTHR10359|PTHR10359:SF18|SM00278|SM00478|SM00525|SSF48150|TIGR01083
nudB|nudB|AP_002485.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000086|IPR003564|IPR015797|IPR020084	NUDIX hydrolase domain|NUDIX hydrolase domain-like|NUDIX hydrolase, conserved site|dATP pyrophosphohydrolase	GO:0006281|GO:0008828|GO:0016787	G3DSA:3.90.79.10|PF00293|PR01404|PS00893|PS51462|PTHR22769|PTHR22769:SF0|SSF55811
nudC|nudC|AP_003822.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000086|IPR015375|IPR015376|IPR015797|IPR020084|IPR022925	NADH pyrophosphatase NudC|NADH pyrophosphatase-like, N-terminal|NUDIX hydrolase domain|NUDIX hydrolase domain-like|NUDIX hydrolase, conserved site|Zinc ribbon, NADH pyrophosphatase	GO:0000210|GO:0016787|GO:0046872	G3DSA:3.90.79.10|MF_00297|PF00293|PF09296|PF09297|PS00893|PS51462|PTHR22769|SSF55811
nudD|nudD|AP_002651.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000086|IPR015797|IPR020084|IPR021161	GDP-mannose mannosyl hydrolase, WcaH|NUDIX hydrolase domain|NUDIX hydrolase domain-like|NUDIX hydrolase, conserved site	GO:0008727|GO:0009103|GO:0016787	G3DSA:3.90.79.10|PF00293|PIRSF037599|PS00893|PS51462|PTHR22769|SSF55811
nudE|nudE|AP_004393.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000086|IPR015797|IPR020084	NUDIX hydrolase domain|NUDIX hydrolase domain-like|NUDIX hydrolase, conserved site	GO:0016787	G3DSA:3.90.79.10|PF00293|PS00893|PS51462|PTHR11839|SSF55811
nudF|nudF|AP_003584.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000086|IPR004385|IPR015797|IPR020084	NUDIX hydrolase domain|NUDIX hydrolase domain-like|NUDIX hydrolase, conserved site|Nucleoside diphosphate pyrophosphatase	GO:0016787|GO:0016818|GO:0046872	G3DSA:3.90.79.10|PF00293|PS00893|PS51462|PTHR11839|PTHR11839:SF1|SSF55811|TIGR00052
nudG|nudG|AP_002378.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000086|IPR015797|IPR020084|IPR020476	NUDIX hydrolase|NUDIX hydrolase domain|NUDIX hydrolase domain-like|NUDIX hydrolase, conserved site	GO:0016787	G3DSA:3.90.79.10|PF00293|PR00502|PS00893|PS51462|PTHR22769|PTHR22769:SF0|SSF55811
nudH|nudH|AP_003393.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000086|IPR015797|IPR020084|IPR020476|IPR022927	NUDIX hydrolase|NUDIX hydrolase domain|NUDIX hydrolase domain-like|NUDIX hydrolase, conserved site|RNA pyrophosphohydrolase RppH	GO:0016787	G3DSA:3.90.79.10|MF_00298|PF00293|PR00502|PS00893|PS51462|PTHR22769|PTHR22769:SF0|SSF55811
nuoA|nuoA|AP_002886.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000440|IPR023043	NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastid|NADH:ubiquinone/plastoquinone oxidoreductase, chain 3	GO:0008137|GO:0016651|GO:0055114	MF_01394|PF00507|PTHR11058|PTHR11058:SF4
nuoB|nuoB|AP_002885.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR006137|IPR006138|IPR014406	NADH-ubiquinone oxidoreductase, 20 Kd subunit|NADH:ubiquinone oxidoreductase-like, 20kDa subunit|[NiFe]-hydrogenase-3-type complex, small subunit/NADH:quinone oxidoreductase, subunit NuoB	GO:0008137|GO:0016651|GO:0048038|GO:0051539|GO:0055114	G3DSA:3.40.50.700|MF_01356|PF01058|PS01150|PTHR11995|PTHR11995:SF2|SSF56770|TIGR01957
nuoC|nuoC|AP_002884.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001135|IPR001268|IPR010218|IPR014029|IPR020396|IPR022885|IPR023062	NAD(P)H-quinone oxidoreductase subunit D/H|NADH dehydrogenase, subunit C|NADH dehydrogenase, subunit CD|NADH-quinone oxidoreductase, subunit D|NADH:ubiquinone oxidoreductase, 30kDa subunit|NADH:ubiquinone oxidoreductase, 30kDa subunit, conserved site|NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site	GO:0008137|GO:0016651|GO:0030964|GO:0048038|GO:0050136|GO:0051287|GO:0055114	G3DSA:1.10.645.10|MF_01357|MF_01358|MF_01359|PD001581|PF00329|PF00346|PS00535|PS00542|PTHR11993|PTHR11993:SF10|SSF143243|SSF56762|TIGR01961|TIGR01962
nuoE|nuoE|AP_002883.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002023|IPR012336	Thioredoxin-like 2Fe-2S ferredoxin|Thioredoxin-like fold	GO:0016491|GO:0055114	G3DSA:3.40.30.10|PF01257|PIRSF000216|PS01099|PTHR10371|PTHR10371:SF3|SSF52833|TIGR01958
nuoF|nuoF|AP_002882.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001949|IPR011537|IPR011538|IPR019554|IPR019575	NADH ubiquinone oxidoreductase, F subunit|NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding|NADH:ubiquinone oxidoreductase, 51kDa subunit|NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site|Soluble ligand binding domain	GO:0008137|GO:0010181|GO:0016651|GO:0051287|GO:0051539|GO:0055114	PF01512|PF10531|PF10589|PS00644|PS00645|PTHR11780|SM00928|SSF140490|SSF142019|SSF142984|TIGR01959
nuoG|nuoG|AP_002881.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000283|IPR001041|IPR006656|IPR006657|IPR006963|IPR009010|IPR010228|IPR012675|IPR019574	2Fe-2S ferredoxin-type domain|Aspartate decarboxylase-like domain|Beta-grasp domain|Molybdopterin oxidoreductase|Molybdopterin oxidoreductase, 4Fe-4S domain|Molydopterin dinucleotide-binding domain|NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site|NADH:ubiquinone oxidoreductase, subunit G|NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding	GO:0008137|GO:0009055|GO:0016020|GO:0016491|GO:0016651|GO:0030151|GO:0042773|GO:0051536|GO:0055114	G3DSA:2.20.25.90|G3DSA:2.40.40.20|G3DSA:3.10.20.30|G3DSA:3.40.50.740|PF00384|PF01568|PF04879|PF10588|PF13510|PS00641|PS00642|PS00643|PS51085|PTHR11615|PTHR11615:SF10|SM00926|SM00929|SSF50692|SSF53706|SSF54292|SSF54862|TIGR01973
nuoH|nuoH|AP_002880.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001694|IPR018086	NADH:ubiquinone oxidoreductase, subunit 1, conserved site|NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H	GO:0016020|GO:0055114	MF_01350|PF00146|PS00667|PS00668|PTHR11432|PTHR11432:SF0
nuoI|nuoI|AP_002879.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001450|IPR010226|IPR017896|IPR017900	4Fe-4S binding domain|4Fe-4S ferredoxin, iron-sulphur binding, conserved site|4Fe-4S ferredoxin-type, iron-sulpur binding domain|NADH-quinone oxidoreductase, chain I	GO:0009055|GO:0016020|GO:0016651|GO:0051536|GO:0051539|GO:0055114	G3DSA:3.30.70.20|MF_01351|PF00037|PS00198|PS51379|PTHR10849|SSF54862|TIGR01971
nuoJ|nuoJ|AP_002878.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001457	NADH:ubiquinone/plastoquinone oxidoreductase, chain 6	GO:0008137|GO:0055114	PF00499
nuoK|nuoK|AP_002877.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001133	NADH-ubiquinone oxidoreductase chain 4L/K	GO:0016651|GO:0042773|GO:0055114	MF_01456|PF00420|PTHR11434|PTHR11434:SF0
nuoL|nuoL|AP_002876.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001516|IPR001750|IPR003945|IPR018393	NADH-plastoquinone oxidoreductase, chain 5|NADH-plastoquinone oxidoreductase, chain 5 subgroup|NADH:ubiquinone oxidoreductase, chain 5/L, N-terminal|NADH:ubiquinone/plastoquinone oxidoreductase	GO:0008137|GO:0042773|GO:0055114	PF00361|PF00662|PR01434|PR01435|PTHR22773|PTHR22773:SF39|TIGR01974
nuoM|nuoM|AP_002875.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001750|IPR003918|IPR010227	NADH-quinone oxidoreductase, chain M/4|NADH:ubiquinone oxidoreductase|NADH:ubiquinone/plastoquinone oxidoreductase	GO:0008137|GO:0042773|GO:0055114	PF00361|PR01437|PTHR22773|PTHR22773:SF40|TIGR01972
nuoN|nuoN|AP_002874.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001750|IPR010096	NAD(P)H-quinone oxidoreductase, subunit N/subunit 2|NADH:ubiquinone/plastoquinone oxidoreductase	GO:0008137|GO:0042773|GO:0055114	MF_00445|PF00361|PTHR22773|PTHR22773:SF41|TIGR01770
nupC|nupC|AP_002992.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002668|IPR008276|IPR011657|IPR018270	Concentrative nucleoside transporter|Concentrative nucleoside transporter, metazoan/bacterial|Na dependent nucleoside transporter|Na dependent nucleoside transporter, C-terminal	GO:0005415|GO:0006810|GO:0016020	PF01773|PF07662|PTHR10590|TIGR00804
nupG|nupG|AP_003521.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004740|IPR016196|IPR020846	Major facilitator superfamily domain|Major facilitator superfamily domain, general substrate transporter|Nucleoside:H+ symporter	GO:0005337|GO:0015858|GO:0016021	G3DSA:1.20.1250.20|PF03825|PS50850|PTHR24003|PTHR24003:SF284|SSF103473|TIGR00889
nusA|nusA|AP_003714.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003029|IPR003583|IPR004087|IPR004088|IPR009019|IPR010213|IPR010214|IPR010995|IPR012340|IPR013735|IPR015946|IPR022967|IPR025249	DNA repair Rad51/transcription factor NusA, alpha-helical|Helix-hairpin-helix DNA-binding motif, class 1|K Homology domain|K Homology domain, type 1|K homology domain, prokaryotic type|K homology domain-like, alpha/beta|KH domain, NusA-like|Nucleic acid-binding, OB-fold|RNA-binding domain, S1|Ribosomal protein S1, RNA-binding domain|Transcription factor NusA, N-terminal|Transcription termination factor NusA|Transcription termination factor NusA, C-terminal duplication	GO:0000166|GO:0003677|GO:0003700|GO:0003723|GO:0006281|GO:0031554	G3DSA:1.10.150.20|G3DSA:2.40.50.140|G3DSA:3.30.1480.10|G3DSA:3.30.300.20|PF00575|PF08529|PF13184|PS50084|PS50126|PTHR22648|PTHR22648:SF0|SM00278|SM00316|SM00322|SSF47794|SSF50249|SSF54814|SSF69705|TIGR01953|TIGR01954
nusB|nusB|AP_001066.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR006027|IPR011605	NusB antitermination factor|NusB/RsmB/TIM44	GO:0003723|GO:0006353|GO:0006355	G3DSA:1.10.940.10|MF_00073|PF01029|PTHR11078|SSF48013|TIGR01951
nusG|nusG|AP_003837.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001062|IPR005824|IPR006645|IPR008991|IPR014722|IPR015869	KOW|Ribosomal protein L2 domain 2|Transcription antitermination protein, NusG|Transcription antitermination protein, NusG, N-terminal|Transcription antitermination protein, NusG, bacteria, conserved site|Translation protein SH3-like domain	GO:0032784|GO:0032968	G3DSA:2.30.30.30|G3DSA:3.30.70.940|PF00467|PF02357|PR00338|PS01014|PTHR30265|PTHR30265:SF0|SM00738|SM00739|SSF50104|SSF82679|TIGR00922
obgE|obgE|AP_003726.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR006073|IPR006074|IPR006169|IPR014100|IPR027417	GTP binding domain|GTP-binding protein Obg/CgtA|GTP1/OBG domain|GTP1/OBG, conserved site|P-loop containing nucleoside triphosphate hydrolase	GO:0000287|GO:0003924|GO:0005525	G3DSA:2.70.210.12|G3DSA:3.40.50.300|MF_01454|PF01018|PF01926|PIRSF002401|PR00326|PS00905|PTHR11702|PTHR11702:SF3|SSF52540|SSF82051|TIGR02729
ogrK|ogrK|AP_002682.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR007684	Zinc finger, Ogr/Delta-type		PF04606
ogt|ogt|AP_001963.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001497|IPR008332|IPR011991|IPR014048|IPR023546	Methylated-DNA--protein-cysteine methyltransferase|Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding|Methylated-DNA-[protein]-cysteine S-methyltransferase, active site|Methylguanine DNA methyltransferase, ribonuclease-like|Winged helix-turn-helix DNA-binding domain	GO:0003824|GO:0003908|GO:0006281	G3DSA:1.10.10.10|MF_00772|PF01035|PF02870|PS00374|PTHR10815|PTHR10815:SF0|SSF46767|SSF53155|TIGR00589
ompA|ompA|AP_001587.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000498|IPR002368|IPR006664|IPR006665|IPR006690|IPR011250	Outer membrane protein, OmpA|Outer membrane protein, OmpA-like, conserved site|Outer membrane protein, OmpA-like, transmembrane domain|Outer membrane protein, OmpA/MotB, C-terminal|Outer membrane protein, bacterial|Outer membrane protein/outer membrane enzyme PagP , beta-barrel	GO:0005198|GO:0009279|GO:0016021	G3DSA:2.40.160.20|G3DSA:3.30.1330.60|PF00691|PF01389|PR01021|PR01022|PS01068|PS51123|SSF103088|SSF56925
ompC|ompC|AP_002811.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001702|IPR001897|IPR013793|IPR023614	Porin domain|Porin, Gram-negative type|Porin, Gram-negative type, conserved site|Porin, gammaproteobacterial	GO:0006810|GO:0015288|GO:0016020	G3DSA:2.40.160.10|PF00267|PR00182|PR00183|PS00576|SSF56935
ompF|ompF|AP_001559.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001702|IPR001897|IPR013793|IPR023614	Porin domain|Porin, Gram-negative type|Porin, Gram-negative type, conserved site|Porin, gammaproteobacterial	GO:0006810|GO:0015288|GO:0016020	G3DSA:2.40.160.10|PF00267|PR00182|PR00183|PS00576|SSF56935
ompG|ompG|AP_001946.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR018981	Outer membrane protein G		G3DSA:2.40.160.40|PF09381|PS51257|SSF56935
ompL|ompL|AP_003933.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR009331|IPR017690	Oligogalacturonate-specific porin|Outer membrane insertion C-terminal signal, omp85 target		G3DSA:2.40.230.30|PF06178|SSF56935|TIGR03304
ompN|ompN|AP_002003.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001702|IPR001897|IPR023614	Porin domain|Porin, Gram-negative type|Porin, gammaproteobacterial	GO:0006810|GO:0015288|GO:0016020	G3DSA:2.40.160.10|PF00267|PR00182|PR00183|SSF56935
ompR|ompR|AP_004385.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001789|IPR001867|IPR011006|IPR011991|IPR016032	CheY-like superfamily|Signal transduction response regulator, C-terminal|Signal transduction response regulator, C-terminal effector|Signal transduction response regulator, receiver domain|Winged helix-turn-helix DNA-binding domain	GO:0000156|GO:0000160|GO:0003677|GO:0006355	G3DSA:1.10.10.10|G3DSA:3.40.50.2300|PF00072|PF00486|PS50110|PTHR26402|PTHR26402:SF63|SM00448|SM00862|SSF46894|SSF52172
ompT|ompT|AP_001210.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000036|IPR020079|IPR020080|IPR023619	Outer membrane adhesin/peptidase omptin|Peptidase A26|Peptidase A26, omptin|Peptidase A26, omptin, conserved site	GO:0004175|GO:0004190|GO:0006508|GO:0009279	G3DSA:2.40.128.90|PF01278|PIRSF001522|PR00482|PS00834|PS00835|SSF69917
ompW|ompW|AP_001882.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR005618|IPR011250|IPR017690	Outer membrane insertion C-terminal signal, omp85 target|Outer membrane protein, OmpW|Outer membrane protein/outer membrane enzyme PagP , beta-barrel	GO:0009279|GO:0016021|GO:0019867	G3DSA:2.40.160.20|PF03922|SSF56925|TIGR03304
ompX|ompX|AP_001445.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000758|IPR011250|IPR017690|IPR027385	Outer membrane insertion C-terminal signal, omp85 target|Outer membrane protein beta-barrel|Outer membrane protein/outer membrane enzyme PagP , beta-barrel|Virulence-related outer membrane protein	GO:0009279|GO:0016021	G3DSA:2.40.160.20|PF13505|PR00316|PS00694|PS00695|SSF56925|TIGR03304
oppA|oppA|AP_001869.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000914|IPR023765	Bacterial extracellular solute-binding protein, family 5|Bacterial extracellular solute-binding protein, family 5, conserved site	GO:0005215|GO:0006810	G3DSA:3.10.105.10|G3DSA:3.40.190.10|PF00496|PIRSF002741|PS01040|PTHR30290|PTHR30290:SF0|SSF53850
oppB|oppB|AP_001870.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000515	Binding-protein-dependent transport systems inner membrane component	GO:0005215|GO:0006810|GO:0016020	G3DSA:1.10.3720.10|PF00528|PS50928|PTHR30465|PTHR30465:SF0|SSF161098
oppC|oppC|AP_001871.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000515|IPR025966	Binding-protein-dependent transport systems inner membrane component|Oligopeptide transport permease C-like, N-terminal domain	GO:0005215|GO:0006810|GO:0016020	G3DSA:1.10.3720.10|PF00528|PF12911|PS50928|PTHR30465|PTHR30465:SF2|SSF161098
oppD|oppD|AP_001872.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003439|IPR003593|IPR010066|IPR013563|IPR017871|IPR027417	AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal|Oligopeptide/dipeptide ABC transporter, C-terminal|P-loop containing nucleoside triphosphate hydrolase	GO:0000166|GO:0005524|GO:0015197|GO:0015833|GO:0016020|GO:0016887|GO:0017111	G3DSA:3.40.50.300|PF00005|PF08352|PS00211|PS50893|PTHR24220|PTHR24220:SF132|SM00382|SSF52540|TIGR01727
oppF|oppF|AP_001873.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003439|IPR003593|IPR010066|IPR013563|IPR027417	AAA+ ATPase domain|ABC transporter-like|Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal|Oligopeptide/dipeptide ABC transporter, C-terminal|P-loop containing nucleoside triphosphate hydrolase	GO:0000166|GO:0005524|GO:0015197|GO:0015833|GO:0016020|GO:0016887|GO:0017111	G3DSA:3.40.50.300|PF00005|PF08352|PTHR24220|PTHR24220:SF81|SM00382|SSF52540|TIGR01727
orn|orn|AP_004665.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR006055|IPR012337|IPR013520|IPR022894	Exonuclease|Exonuclease, RNase T/DNA polymerase III|Oligoribonuclease|Ribonuclease H-like domain	GO:0003676|GO:0004527|GO:0005622|GO:0016788	G3DSA:3.30.420.10|MF_00045|PF00929|PTHR11046|SM00479|SSF53098
osmB|osmB|AP_001909.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR008816	Glycine zipper 2TM domain	GO:0019867	PD052686|PF05433|PS51257
osmC|osmC|AP_002105.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003718|IPR015946|IPR019904	K homology domain-like, alpha/beta|Peroxiredoxin, OsmC-like protein|Peroxiredoxin, osmotically inducible protein C, subgroup	GO:0006950	G3DSA:3.30.300.20|PF02566|SSF82784|TIGR03562
osmE|osmE|AP_002358.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR007450	Lipoprotein SmpA/OmlA	GO:0019867	PF04355|PS51257
osmY|osmY|AP_004863.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR007055|IPR014004	BON domain|Transport-associated and nodulation domain, bacteria		PF04972|PS50914|SM00749
otsA|otsA|AP_002515.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001830|IPR012766	Alpha,alpha-trehalose-phosphate synthase|Glycosyl transferase, family 20	GO:0003824|GO:0003825|GO:0005992	G3DSA:3.40.50.2000|PF00982|PTHR10788|SSF53756|TIGR02400
otsB|otsB|AP_002516.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003337|IPR006379|IPR023214	HAD-like domain|HAD-superfamily hydrolase, subfamily IIB|Trehalose-phosphatase	GO:0003824|GO:0005992|GO:0008152	G3DSA:3.40.50.1000|PF02358|PTHR10788|SSF56784|TIGR00685|TIGR01484
oxc|oxc|AP_002973.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR011766|IPR012000|IPR012001|IPR017660	Oxalyl-CoA decarboxylase|Thiamine pyrophosphate enzyme, C-terminal TPP-binding|Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain|Thiamine pyrophosphate enzyme, central domain	GO:0000287|GO:0003824|GO:0008949|GO:0030976|GO:0033611|GO:0046872	G3DSA:3.40.50.1220|G3DSA:3.40.50.970|PF00205|PF02775|PF02776|PTHR18968|PTHR18968:SF6|SSF52467|SSF52518|TIGR03254
oxyR|oxyR|AP_003849.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000847|IPR005119|IPR011991	LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain	GO:0003700|GO:0006355	G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PR00039|PTHR32389|PTHR32389:SF0|SSF46785|SSF53850
paaA|paaA|AP_002015.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR007814|IPR009078|IPR011881|IPR012347	Ferritin-like superfamily|Ferritin-related|Phenylacetate-CoA oxygenase, PaaG subunit|Phenylacetic acid catabolic	GO:0016491|GO:0046914|GO:0055114	G3DSA:1.20.1260.10|PF05138|PTHR30458|PTHR30458:SF0|SSF47240|TIGR02156
paaB|paaB|AP_002016.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR009359	Phenylacetic acid degradation B		PF06243|PIRSF030200|TIGR02157
paaC|paaC|AP_002017.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR007814|IPR009078|IPR011882|IPR012347	Ferritin-like superfamily|Ferritin-related|Phenylacetate-CoA oxygenase, PaaI subunit|Phenylacetic acid catabolic	GO:0016491|GO:0046914|GO:0055114	G3DSA:1.20.1260.10|PF05138|PIRSF037834|PTHR30458|PTHR30458:SF1|SSF47240|TIGR02158
paaD|paaD|AP_002018.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002744|IPR011883	Domain of unknown function DUF59|Phenylacetate-CoA oxygenase, PaaJ subunit		PF01883|PTHR30318|SSF117916|TIGR02159
paaE|paaE|AP_002019.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001041|IPR001221|IPR001433|IPR001709|IPR006058|IPR008333|IPR011884|IPR012675|IPR017927|IPR017938	2Fe-2S ferredoxin, iron-sulphur binding site|2Fe-2S ferredoxin-type domain|Beta-grasp domain|Ferredoxin reductase-type FAD-binding domain|Flavoprotein pyridine nucleotide cytochrome reductase|Oxidoreductase FAD/NAD(P)-binding|Oxidoreductase, FAD-binding domain|Phenol hydroxylase reductase|Phenylacetate-CoA oxygenase/reductase, PaaK subunit|Riboflavin synthase-like beta-barrel	GO:0009055|GO:0010124|GO:0016491|GO:0051536|GO:0051537|GO:0055114	G3DSA:2.40.30.10|G3DSA:3.10.20.30|G3DSA:3.40.50.80|PF00111|PF00175|PF00970|PR00371|PR00410|PS00197|PS51085|PS51384|PTHR19370|PTHR19370:SF7|SSF52343|SSF54292|SSF63380|TIGR02160
paaF|paaF|AP_002020.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001753	Crotonase superfamily	GO:0003824|GO:0008152	G3DSA:3.90.226.10|PF00378|PTHR11941|SSF52096
paaG|paaG|AP_002021.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001753|IPR011968|IPR014748	Crontonase, C-terminal|Crotonase superfamily|Phenylacetate degradation probable enoyl-CoA hydratase PaaB	GO:0003824|GO:0008152|GO:0010124	G3DSA:1.10.12.10|G3DSA:3.90.226.10|PF00378|PTHR11941|SSF52096|TIGR02280
paaH|paaH|AP_002022.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR006108|IPR006176|IPR006180|IPR008927|IPR011967|IPR013328|IPR016040	3-hydroxyacyl-CoA dehydrogenase PaaC|3-hydroxyacyl-CoA dehydrogenase, C-terminal|3-hydroxyacyl-CoA dehydrogenase, NAD binding|3-hydroxyacyl-CoA dehydrogenase, conserved site|6-phosphogluconate dehydrogenase, C-terminal-like|Dehydrogenase, multihelical|NAD(P)-binding domain	GO:0003857|GO:0006631|GO:0008691|GO:0010124|GO:0016491|GO:0016616|GO:0050662|GO:0055114	G3DSA:1.10.1040.10|G3DSA:3.40.50.720|PF00725|PF02737|PS00067|PTHR23309|SSF48179|SSF51735|TIGR02279
paaI|paaI|AP_002023.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003736|IPR006683|IPR011973	Phenylacetic acid degradation protein PaaD|Phenylacetic acid degradation-related domain|Thioesterase superfamily	GO:0016790	G3DSA:3.10.129.10|PF03061|PTHR12418|SSF54637|TIGR00369|TIGR02286
paaJ|paaJ|AP_002024.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002155|IPR012793|IPR016038|IPR016039|IPR020616|IPR020617	Beta-ketoadipyl CoA thiolase|Thiolase|Thiolase, C-terminal|Thiolase, N-terminal|Thiolase-like|Thiolase-like, subgroup	GO:0003824|GO:0008152|GO:0016747|GO:0019619	G3DSA:3.40.47.10|PF00108|PF02803|PIRSF000429|PTHR18919|PTHR18919:SF28|SSF53901|TIGR01930|TIGR02430
paaK|paaK|AP_002025.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000873|IPR011880	AMP-dependent synthetase/ligase|Phenylacetate-CoA ligase	GO:0003824|GO:0008152|GO:0010124|GO:0047475	G3DSA:3.30.300.30|G3DSA:3.40.50.980|PF00501|PIRSF006444|PTHR24095|PTHR24095:SF45|SSF56801|TIGR02155
paaX|paaX|AP_002026.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR011965|IPR012906|IPR013225	PaaX-like, C-terminal|PaaX-like, N-terminal|Phenylacetic acid degradation operon negative regulatory protein PaaX	GO:0006351	PF07848|PF08223|PIRSF020623|PTHR30319|PTHR30319:SF0|TIGR02277
paaY|paaY|AP_002027.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001451|IPR011004|IPR011974	Bacterial transferase hexapeptide repeat|Phenylacetic acid degradation protein PaaY|Trimeric LpxA-like	GO:0016740	G3DSA:2.160.10.10|PF00132|PTHR22572|PTHR22572:SF48|SSF51161|TIGR02287
pabA|pabA|AP_004429.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR006221|IPR017926	Anthranilate synthase/para-aminobenzoate synthase like domain|Glutamine amidotransferase	GO:0008152	G3DSA:3.40.50.880|PF00117|PR00096|PR00097|PR00099|PS51273|PTHR11922|PTHR11922:SF10|SSF52317|TIGR00566
pabB|pabB|AP_002431.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR005801|IPR005802|IPR006805|IPR015890|IPR019999	ADC synthase|Anthranilate synthase component I|Anthranilate synthase component I, N-terminal|Chorismate binding, C-terminal|Para-aminobenzoate synthase, component I	GO:0009058|GO:0009396|GO:0016833	G3DSA:3.60.120.10|PF00425|PF04715|PR00095|PTHR11236|PTHR11236:SF11|SSF56322|TIGR00553
pabC|pabC|AP_001722.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001544|IPR017824|IPR018300	Aminodeoxychorismate lyase, class IV|Aminotransferase, class IV|Aminotransferase, class IV, conserved site	GO:0003824|GO:0008152|GO:0008696|GO:0030170|GO:0046656	G3DSA:3.20.10.10|G3DSA:3.30.470.10|PF01063|PS00770|PTHR11825|PTHR11825:SF7|SSF56752|TIGR03461
pal|pal|AP_001379.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR006664|IPR006665|IPR006690|IPR014169	Outer membrane protein, OmpA-like, conserved site|Outer membrane protein, OmpA/MotB, C-terminal|Outer membrane protein, bacterial|Peptidoglycan-associated lipoprotein	GO:0009279|GO:0016021	G3DSA:3.30.1330.60|PF00691|PR01021|PS01068|PS51123|PS51257|SSF103088|TIGR02802
panB|panB|AP_000795.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003700|IPR015813	Ketopantoate hydroxymethyltransferase|Pyruvate/Phosphoenolpyruvate kinase-like domain	GO:0003824|GO:0003864|GO:0015940	G3DSA:3.20.20.60|MF_00156|PF02548|PIRSF000388|PTHR20881|SSF51621|TIGR00222
panC|panC|AP_000794.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003721|IPR004821|IPR014729	Cytidyltransferase-like domain|Pantoate-beta-alanine ligase|Rossmann-like alpha/beta/alpha sandwich fold	GO:0003824|GO:0004592|GO:0009058|GO:0015940	G3DSA:3.30.1300.10|G3DSA:3.40.50.620|MF_00158|PF02569|PTHR21299|PTHR21299:SF1|SSF52374|TIGR00018|TIGR00125
panD|panD|AP_000792.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003190|IPR009010	Aspartate decarboxylase|Aspartate decarboxylase-like domain	GO:0004068|GO:0006523	G3DSA:2.40.40.20|PF02261|PIRSF006246|PTHR21012|PTHR21012:SF0|SSF50692|TIGR00223
panE|panE|AP_001075.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003710|IPR008927|IPR013328|IPR013332|IPR013752|IPR016040	6-phosphogluconate dehydrogenase, C-terminal-like|Dehydrogenase, multihelical|Ketopantoate reductase ApbA/PanE|Ketopantoate reductase ApbA/PanE, C-terminal|Ketopantoate reductase ApbA/PanE, N-terminal|NAD(P)-binding domain	GO:0005737|GO:0008677|GO:0015940|GO:0016491|GO:0016616|GO:0050661|GO:0050662|GO:0055114	G3DSA:1.10.1040.10|G3DSA:3.40.50.720|PF02558|PF08546|PTHR21708|SSF48179|SSF51735|TIGR00745
panF|panF|AP_003798.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001734|IPR011849|IPR018212|IPR019900	Sodium/pantothenate symporter|Sodium/solute symporter|Sodium/solute symporter, conserved site|Sodium/solute symporter, subgroup	GO:0005215|GO:0006810|GO:0015081|GO:0015233|GO:0015887|GO:0016020|GO:0016021|GO:0031402|GO:0055085|GO:0071436	PF00474|PS00456|PS00457|PS50283|PTHR11819|PTHR11819:SF80|TIGR00813|TIGR02119
parC|parC|AP_003569.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002205|IPR005742|IPR006691|IPR013758|IPR013760|IPR024946	Arginine repressor C-terminal-like domain|DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel|DNA topoisomerase IV, subunit A, Gram-negative|DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta|DNA topoisomerase, type IIA, subunit A/C-terminal|DNA topoisomerase, type IIA-like domain	GO:0003677|GO:0003916|GO:0003918|GO:0005524|GO:0005694|GO:0006259|GO:0006265	G3DSA:2.120.10.90|G3DSA:3.30.1360.40|G3DSA:3.90.199.10|PF00521|PF03989|PTHR10169|PTHR10169:SF4|SM00434|SSF101904|SSF56719|TIGR01062
parE|parE|AP_003580.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001241|IPR002288|IPR003594|IPR005737|IPR006171|IPR013506|IPR013759|IPR013760|IPR014721|IPR018522|IPR020568	DNA gyrase B subunit, C-terminal|DNA topoisomerase IV, subunit B, Gram-negative|DNA topoisomerase, type IIA|DNA topoisomerase, type IIA, central domain|DNA topoisomerase, type IIA, conserved site|DNA topoisomerase, type IIA, subunit B, domain 2|DNA topoisomerase, type IIA-like domain|Histidine kinase-like ATPase, ATP-binding domain|Ribosomal protein S5 domain 2-type fold|Ribosomal protein S5 domain 2-type fold, subgroup|Toprim domain	GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265	G3DSA:3.30.230.10|G3DSA:3.30.565.10|G3DSA:3.40.50.670|PF00204|PF00986|PF01751|PF02518|PR00418|PR01098|PS00177|PTHR10169|PTHR10169:SF20|SM00387|SM00433|SSF54211|SSF55874|SSF56719|TIGR01055
pbpC|pbpC|AP_003105.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001264|IPR001460|IPR009647|IPR011815|IPR012338|IPR023346	Beta-lactamase/transpeptidase-like|Glycosyl transferase, family 51|Lysozyme-like domain|Penicillin-binding protein 1C|Penicillin-binding protein, transpeptidase|Penicillin-binding, C-terminal	GO:0008658|GO:0008955|GO:0009252	G3DSA:1.10.3810.10|G3DSA:3.40.710.10|PF00905|PF00912|PF06832|PTHR30198|PTHR30198:SF0|SSF53955|SSF56601|TIGR02073
pbpG|pbpG|AP_002731.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001967|IPR012338|IPR018044	Beta-lactamase/transpeptidase-like|Peptidase S11, D-alanyl-D-alanine carboxypeptidase A|Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal	GO:0006508|GO:0009002	G3DSA:3.40.710.10|PF00768|PR00725|PTHR21581|PTHR21581:SF0|SSF56601
pck|pck|AP_004387.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001272|IPR008210|IPR013035|IPR015994	Phosphoenolpyruvate carboxykinase (ATP), conserved site|Phosphoenolpyruvate carboxykinase, ATP-utilising|Phosphoenolpyruvate carboxykinase, C-terminal|Phosphoenolpyruvate carboxykinase, N-terminal	GO:0004611|GO:0004612|GO:0005524|GO:0006094|GO:0017076	G3DSA:3.40.449.10|G3DSA:3.90.228.20|MF_00453|PF01293|PIRSF006294|PS00532|PTHR30031|PTHR30031:SF0|SSF53795|SSF68923|TIGR00224
pcm|pcm|AP_003310.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000682	Protein-L-isoaspartate(D-aspartate) O-methyltransferase	GO:0004719|GO:0006464	G3DSA:3.40.50.150|MF_00090|PF01135|PS01279|PTHR11579|PTHR11579:SF0|SSF53335|TIGR00080
pcnB|pcnB|AP_000804.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002646|IPR010206|IPR025866|IPR026007	Poly A polymerase, head domain|Poly(A) polymerase PcnB/CCA-adding enzyme|Poly(A) polymerase, PcnB|Polymerase A arginine-rich C-terminal domain	GO:0003723|GO:0004652|GO:0006378|GO:0006396|GO:0016779	G3DSA:1.10.3090.10|G3DSA:3.30.460.10|PF01743|PF12626|PF12627|PTHR13734|PTHR13734:SF5|SSF81301|SSF81891|TIGR01942
pdhR|pdhR|AP_000774.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000524|IPR008920|IPR011711|IPR011991|IPR027376	FadR/GntR C-terminal domain|Fatty acid responsive transcription factor FadR, C-terminal|GntR, C-terminal|Transcription regulator HTH, GntR|Winged helix-turn-helix DNA-binding domain	GO:0000062|GO:0003677|GO:0003700|GO:0005622|GO:0006355|GO:0019217	G3DSA:1.10.10.10|G3DSA:1.20.120.530|PF00392|PF07729|PR00035|PS50949|PTHR11751|PTHR11751:SF1|SM00345|SM00895|SSF46785|SSF48008
pdxA|pdxA|AP_000716.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR005255|IPR024084	4-hydroxythreonine-4-phosphate dehydrogenase PdxA|Isopropylmalate dehydrogenase-like domain	GO:0008615|GO:0016616|GO:0050570|GO:0051287|GO:0055114	G3DSA:3.40.718.10|MF_00536|PF04166|PTHR30004|PTHR30004:SF0|SSF53659|TIGR00557
pdxB|pdxB|AP_002920.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR006139|IPR006140|IPR016040|IPR020921|IPR024531	D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding|D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain|Erythronate-4-phosphate dehydrogenase|Erythronate-4-phosphate dehydrogenase, dimerisation domain|NAD(P)-binding domain	GO:0005737|GO:0008152|GO:0008615|GO:0016616|GO:0033711|GO:0046983|GO:0048037|GO:0051287|GO:0055114	G3DSA:3.40.50.720|MF_01825|PF00389|PF02826|PF11890|PS00065|PS00671|PTHR10996|PTHR10996:SF4|SSF51735|SSF52283
pdxH|pdxH|AP_002260.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000659|IPR011576|IPR012349|IPR019576|IPR019740	FMN-binding split barrel|Pyridoxamine 5'-phosphate oxidase|Pyridoxamine 5'-phosphate oxidase, conserved site|Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain|Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal	GO:0004733|GO:0008615|GO:0010181|GO:0016491|GO:0016638|GO:0055114	G3DSA:2.30.110.10|MF_01629|PF01243|PF10590|PIRSF000190|PS01064|PTHR10851|SSF50475|TIGR00558
pdxJ|pdxJ|AP_003150.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004569|IPR013785	Aldolase-type TIM barrel|Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ	GO:0003824|GO:0005737|GO:0008615|GO:0033856	G3DSA:3.20.20.70|PF03740|PTHR30456|PTHR30456:SF0|SSF63892|TIGR00559
pdxK|pdxK|AP_003012.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004625|IPR013749|IPR023479	Phosphomethylpyrimidine kinase type-1|Pyridoxal kinase|Pyridoxal phosphate (active vitamin B6) biosynthesis, pyridoxal kinase	GO:0008478|GO:0009443	G3DSA:3.40.1190.20|MF_01638|PF08543|PTHR10534|SSF53613|TIGR00687
pdxY|pdxY|AP_002258.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004625|IPR013749|IPR023685	Phosphomethylpyrimidine kinase type-1|Pyridoxal kinase PdxY|Pyridoxal phosphate (active vitamin B6) biosynthesis, pyridoxal kinase	GO:0008478|GO:0009443	G3DSA:3.40.1190.20|MF_01639|PF08543|PTHR10534|SSF53613|TIGR00687
pepA|pepA|AP_004756.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000819|IPR008283|IPR011356|IPR023042	Leucine aminopeptidase/peptidase B|Peptidase M17, leucine aminopeptidase|Peptidase M17, leucyl aminopeptidase, C-terminal|Peptidase M17, leucyl aminopeptidase, N-terminal	GO:0004177|GO:0005622|GO:0005737|GO:0006508|GO:0008235|GO:0019538|GO:0030145	G3DSA:3.40.220.10|G3DSA:3.40.630.10|MF_00181|PF00883|PF02789|PR00481|PS00631|PTHR11963|PTHR11963:SF3|SSF52949|SSF53187
pepB|pepB|AP_003109.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000819|IPR008330|IPR011356	Leucine aminopeptidase/peptidase B|Peptidase M17, leucyl aminopeptidase, C-terminal|Peptidase M17, peptidase B	GO:0004177|GO:0005622|GO:0005737|GO:0006508|GO:0008235|GO:0019538|GO:0030145	G3DSA:3.40.630.10|MF_00504|PF00883|PF12404|PIRSF036388|PR00481|PS00631|PTHR11963|PTHR11963:SF3|SSF53187
pepD|pepD|AP_000890.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001160|IPR002933|IPR011650	Peptidase M20|Peptidase M20, dimerisation domain|Peptidase M20C, Xaa-His dipeptidase	GO:0006508|GO:0008152|GO:0016787	G3DSA:3.40.630.10|PF01546|PF07687|PIRSF016599|PR00934|PTHR11014|PTHR11014:SF25|SSF53187|TIGR01893
pepE|pepE|AP_004522.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR005320|IPR023172	Peptidase S51|Peptidase S51, dipeptidase E	GO:0006508|GO:0008236|GO:0016805	G3DSA:3.40.50.880|MF_00510|PF03575|PTHR20842|PTHR20842:SF0|SSF52317
pepN|pepN|AP_001562.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001930|IPR012779|IPR014782|IPR024601	Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase|Peptidase M1, alanyl aminopeptidase|Peptidase M1, alanyl aminopeptidase, C-terminal|Peptidase M1, membrane alanine aminopeptidase, N-terminal	GO:0006508|GO:0008237|GO:0008270	G3DSA:1.10.390.10|G3DSA:1.25.50.10|PF01433|PF11940|PR00756|PTHR11533|PTHR11533:SF8|SSF55486|SSF63737|TIGR02414
pepP|pepP|AP_003467.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000994|IPR001131|IPR001714|IPR007865	Aminopeptidase P N-terminal domain|Peptidase M24, methionine aminopeptidase|Peptidase M24, structural domain|Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site	GO:0004177|GO:0006508|GO:0008235|GO:0009987|GO:0030145	G3DSA:3.40.350.10|G3DSA:3.90.230.10|PF00557|PF05195|PR00599|PS00491|PTHR10804|PTHR10804:SF17|SM01011|SSF53092|SSF55920
pepQ|pepQ|AP_003955.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000994|IPR001131|IPR022846	Peptidase M24, structural domain|Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site|Xaa-Pro dipeptidase	GO:0009987|GO:0016795	G3DSA:3.90.230.10|MF_01279|PF00557|PS00491|PTHR10804|PTHR10804:SF17|SSF55920
pepT|pepT|AP_001753.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001261|IPR002933|IPR010161|IPR011650	ArgE/DapE/ACY1/CPG2/YscS, conserved site|Peptidase M20|Peptidase M20, dimerisation domain|Peptidase M20B, tripeptide aminopeptidase	GO:0005737|GO:0006508|GO:0006518|GO:0008152|GO:0008237|GO:0008270|GO:0016787|GO:0045148	G3DSA:3.30.70.360|G3DSA:3.40.630.10|MF_00550|PF01546|PF07687|PIRSF037215|PS00758|PS00759|PTHR11014|PTHR11014:SF3|SSF53187|SSF55031|TIGR01882
perR|perR|AP_000907.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000847|IPR005119|IPR011991	LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain	GO:0003700|GO:0006355	G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PR00039|PS50931|PTHR30537|PTHR30537:SF0|SSF46785|SSF53850
pfkA|pfkA|AP_003893.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000023|IPR012003|IPR012828|IPR015912|IPR022953	6-phosphofructokinase|ATP-dependent phosphofructokinase, prokaryotic|Phosphofructokinase|Phosphofructokinase domain|Phosphofructokinase, conserved site	GO:0003872|GO:0005524|GO:0005945|GO:0006002|GO:0006096|GO:0008443	G3DSA:3.40.50.450|MF_00339|PF00365|PIRSF000532|PR00476|PS00433|PTHR13697|PTHR13697:SF0|SSF53784|TIGR02482
pfkB|pfkB|AP_002342.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002173|IPR011611|IPR017583	Carbohydrate kinase PfkB|Carbohydrate/puine kinase, PfkB, conserved site|Tagatose/fructose phosphokinase	GO:0005975|GO:0016773	G3DSA:3.40.1190.20|PF00294|PIRSF000535|PS00583|PS00584|PTHR10584|PTHR10584:SF54|SSF53613|TIGR03168
pflA|pflA|AP_001532.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR007197|IPR012838	Pyruvate formate-lyase activating enzyme|Radical SAM	GO:0003824|GO:0043365|GO:0051536|GO:0055114	G3DSA:3.80.30.10|PF04055|PF13353|PTHR30352|SSF102114|TIGR02493
pflB|pflB|AP_001533.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001150|IPR004184|IPR005949|IPR019777	Formate C-acetyltransferase glycine radical, conserved site|Formate acetyltransferase|Glycine radical domain|Pyruvate formate lyase domain	GO:0003824|GO:0005737|GO:0005975|GO:0008152|GO:0008861	G3DSA:3.20.70.20|PF01228|PF02901|PIRSF000379|PS00850|PS51149|PS51554|PTHR30191|PTHR30191:SF0|SSF51998|TIGR01255
pflC|pflC|AP_003858.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR007197|IPR012839	Glycyl radical enzyme activase|Radical SAM	GO:0003824|GO:0005737|GO:0006006|GO:0016491|GO:0051536|GO:0055114	G3DSA:3.80.30.10|PF04055|PF13353|PIRSF000371|PTHR30352|SSF102114|SSF54862
pflD|pflD|AP_003859.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001150|IPR004184|IPR010098|IPR019777	Formate C-acetyltransferase glycine radical, conserved site|Glycine radical domain|Glycyl radical enzyme, PFL2/glycerol dehydratase family|Pyruvate formate lyase domain	GO:0003824|GO:0008152	G3DSA:3.20.70.20|PF01228|PF02901|PS00850|PS51149|PS51554|PTHR30191|PTHR30191:SF0|SSF51998|TIGR01774
pfs|pfs|AP_000820.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000845|IPR010049|IPR018017	MTA/SAH nucleosidase|Nucleoside phosphorylase|Nucleoside phosphorylase domain	GO:0003824|GO:0008782|GO:0008930|GO:0009116|GO:0009164|GO:0019509	G3DSA:3.40.50.1580|PF01048|PTHR21234|PTHR21234:SF6|SSF53167|TIGR01704
pgi|pgi|AP_004526.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001672|IPR018189|IPR023096	Phosphoglucose isomerase (PGI)|Phosphoglucose isomerase, C-terminal|Phosphoglucose isomerase, conserved site	GO:0004347|GO:0006094|GO:0006096	G3DSA:1.10.1390.10|G3DSA:3.40.50.10490|MF_00473|PF00342|PR00662|PS00174|PS00765|PS51463|PTHR11469|PTHR11469:SF0|SSF53697
pgk|pgk|AP_003484.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001576|IPR015824|IPR015901|IPR015911	Phosphoglycerate kinase|Phosphoglycerate kinase, C-terminal|Phosphoglycerate kinase, N-terminal|Phosphoglycerate kinase, conserved site	GO:0004618|GO:0006096	G3DSA:3.40.50.1260|G3DSA:3.40.50.1270|MF_00145|PF00162|PIRSF000724|PR00477|PS00111|PTHR11406|SSF53748
pgm|pgm|AP_001326.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR005843|IPR005844|IPR005845|IPR005846|IPR005852|IPR016055|IPR016066	Alpha-D-phosphohexomutase, C-terminal|Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III|Alpha-D-phosphohexomutase, alpha/beta/alpha domain I|Alpha-D-phosphohexomutase, alpha/beta/alpha domain II|Alpha-D-phosphohexomutase, alpha/beta/alpha domain III|Alpha-D-phosphohexomutase, conserved site|Phosphoglucomutase, alpha-D-glucose specific	GO:0000287|GO:0004614|GO:0005975|GO:0016868	G3DSA:3.30.310.50|G3DSA:3.40.120.10|PF00408|PF02878|PF02879|PF02880|PS00710|PTHR22573|PTHR22573:SF2|SSF53738|SSF55957|TIGR01132
pgpA|pgpA|AP_001068.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR007686|IPR026037	Phosphatidylglycerophosphatase A|YutG/PgpA domain	GO:0006629|GO:0008962	PF04608|PIRSF006162|SSF101307
pgpB|pgpB|AP_001904.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000326|IPR016118	Phosphatidic acid phosphatase type 2/haloperoxidase|Phosphatidic acid phosphatase/chloroperoxidase, N-terminal	GO:0003824|GO:0016020	G3DSA:1.20.144.10|PF01569|PTHR14969|SM00014|SSF48317
pgsA|pgsA|AP_002527.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000462|IPR004570|IPR023762	CDP-alcohol phosphatidyltransferase|CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase|CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase, bacterial	GO:0008444|GO:0008654|GO:0016020|GO:0016021|GO:0016780	MF_01437|PF01066|PIRSF000847|PS00379|PTHR14269|TIGR00560
pheA|pheA|AP_003180.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001086|IPR002701|IPR008242|IPR010952|IPR018528|IPR020822	Bifunctional P-protein, chorismate mutase/prephenate dehydratase|Chorismate mutase|Chorismate mutase, gammaproteobacteria|Chorismate mutase, type II|Prephenate dehydratase|Prephenate dehydratase, conserved site	GO:0004106|GO:0004664|GO:0005737|GO:0009094|GO:0046417	G3DSA:1.20.59.10|G3DSA:3.30.70.260|G3DSA:3.40.190.10|PF00800|PF01817|PIRSF001500|PS00857|PS00858|PS51168|PS51171|PTHR21022|PTHR21022:SF0|SM00830|SSF48600|SSF53850|SSF55021|TIGR01797
pheP|pheP|AP_001221.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002293|IPR004840|IPR004841	Amino acid permease domain|Amino acid permease, conserved site|Amino acid/polyamine transporter I	GO:0003333|GO:0006810|GO:0006865|GO:0015171|GO:0016020|GO:0016021|GO:0055085	PF00324|PIRSF006060|PS00218|PTHR11785|PTHR11785:SF26
pheS|pheS|AP_002334.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002319|IPR004188|IPR004529|IPR006195|IPR010978|IPR022911	Aminoacyl-tRNA synthetase, class II|Phenylalanine-tRNA ligase alpha chain 1, bacterial|Phenylalanine-tRNA ligase, class II, N-terminal|Phenylalanyl-tRNA synthetase|Phenylalanyl-tRNA synthetase, class IIc, alpha subunit|tRNA-binding arm	GO:0000049|GO:0000166|GO:0004812|GO:0004826|GO:0005524|GO:0005737|GO:0006418|GO:0006432|GO:0043039	G3DSA:3.30.930.10|MF_00281|PF01409|PF02912|PS50862|PTHR11538|PTHR11538:SF20|SSF46589|SSF55681|TIGR00468
pheT|pheT|AP_002333.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002547|IPR004532|IPR005121|IPR005146|IPR005147|IPR009061|IPR012340|IPR020825	B3/B4 tRNA-binding domain|DNA binding domain, putative|Nucleic acid-binding, OB-fold|Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding|Phenylalanine-tRNA ligase, class IIc, beta subunit, bacterial|Phenylalanyl-tRNA synthetase, B3/B4|tRNA synthetase, B5-domain|tRNA-binding domain	GO:0000049|GO:0000166|GO:0000287|GO:0003723|GO:0004826|GO:0005524|GO:0005737|GO:0006432|GO:0008033	G3DSA:2.40.50.140|G3DSA:3.30.56.10|G3DSA:3.30.56.20|G3DSA:3.30.70.380|G3DSA:3.30.930.10|G3DSA:3.50.40.10|MF_00283|PF01588|PF03147|PF03483|PF03484|PS50886|PS51447|PS51483|PTHR10947|PTHR10947:SF0|SM00873|SM00874|SM00896|SSF46955|SSF50249|SSF54991|SSF55681|SSF56037|TIGR00472
phnA|phnA|AP_004609.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004624|IPR013987|IPR013988	PhnA protein|PhnA protein, C-terminal|PhnA protein, N-terminal		G3DSA:2.20.25.10|G3DSA:2.30.30.40|PF03831|PF08274|PTHR30305|PTHR30305:SF0|SSF57783|SSF82057|TIGR00686
phnB|phnB|AP_004608.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091				G3DSA:3.10.180.10|PF06983|SSF54593
phnC|phnC|AP_004607.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003439|IPR003593|IPR012693|IPR017871|IPR027417	AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter, phosphonate import, PhnC|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase	GO:0000166|GO:0005524|GO:0015416|GO:0015716|GO:0016020|GO:0016887|GO:0017111	G3DSA:3.40.50.300|PF00005|PS00211|PS50893|PS51249|PTHR24220|PTHR24220:SF91|SM00382|SSF52540|TIGR02315
phnD|phnD|AP_004606.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR005770|IPR017797	ABC transporter, phosphonate, periplasmic substrate-binding protein|Phosphonate-binding periplasmic protein	GO:0015604|GO:0015716|GO:0030288	G3DSA:3.40.190.10|PF12974|PTHR30043|PTHR30043:SF0|SSF53850|TIGR01098|TIGR03431
phnF|phnF|AP_004604.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000524|IPR011663|IPR011991|IPR012702	Phosphonate C-P lyase system, transcriptional regulator PhnF|Transcription regulator HTH, GntR|UbiC transcription regulator-associated|Winged helix-turn-helix DNA-binding domain	GO:0003677|GO:0003700|GO:0005622|GO:0006355	G3DSA:1.10.10.10|G3DSA:3.40.1410.10|PF00392|PF07702|PR00035|PS50949|PTHR11751|PTHR11751:SF130|SM00345|SM00866|SSF46785|SSF64288|TIGR02325
phnG|phnG|AP_004603.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR009609	Phosphonate metabolism PhnG	GO:0015716|GO:0019634	PF06754|TIGR03293
phnH|phnH|AP_004602.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR008772	Bacterial phosphonate metabolism, PhnH	GO:0019634	PF05845|PIRSF020680|SSF159709|TIGR03292
phnI|phnI|AP_004601.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR008773	Phosphonate metabolism protein PhnI	GO:0019634	PF05861|PIRSF007313|PTHR30320
phnJ|phnJ|AP_004600.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR010306	Phosphonate metabolism PhnJ	GO:0016829|GO:0019700|GO:0042916	PF06007|PIRSF011468|PTHR30356|PTHR30356:SF0
phnK|phnK|AP_004599.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003439|IPR003593|IPR012700|IPR013563|IPR017871|IPR027417	AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|Oligopeptide/dipeptide ABC transporter, C-terminal|P-loop containing nucleoside triphosphate hydrolase|Phosphonate C-P lyase system, PhnK	GO:0000166|GO:0005524|GO:0015833|GO:0016887|GO:0017111	G3DSA:3.40.50.300|PF00005|PF08352|PIRSF037116|PS00211|PS50893|PTHR24220|PTHR24220:SF132|SM00382|SSF52540|TIGR02323
phnL|phnL|AP_004598.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003439|IPR003593|IPR012701|IPR017871|IPR027417	AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase|Phosphonate C-P lyase system, PhnL	GO:0000166|GO:0005524|GO:0016887|GO:0017111	G3DSA:3.40.50.300|PF00005|PS00211|PS50893|PTHR24220|PTHR24220:SF110|SM00382|SSF52540|TIGR02324
phnM|phnM|AP_004597.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR011059|IPR012696	Metal-dependent hydrolase, composite domain|Phosphonate metabolism PhnM	GO:0016810|GO:0019700	G3DSA:2.30.40.10|G3DSA:3.20.20.140|PF13147|PIRSF038971|PTHR11271|PTHR11271:SF22|SSF51338|SSF51556|TIGR02318
phnN|phnN|AP_004596.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR008145|IPR012699|IPR027417	Guanylate kinase/L-type calcium channel|P-loop containing nucleoside triphosphate hydrolase|Ribose 1,5-bisphosphate phosphokinase PhnN	GO:0005515|GO:0006015|GO:0033863	G3DSA:3.40.50.300|MF_00836|PF13238|SM00072|SSF52540|TIGR02322
phnO|phnO|AP_004595.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000182|IPR016181	Acyl-CoA N-acyltransferase|GNAT domain	GO:0008080	G3DSA:3.40.630.30|PF00583|PS51186|PTHR23091|SSF55729
phnP|phnP|AP_004594.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001279|IPR017693	Beta-lactamase-like|Phosphonate metabolism protein PhnP	GO:0008081|GO:0016787|GO:0019700	G3DSA:3.60.15.10|PF12706|PTHR12553|PTHR12553:SF21|SM00849|SSF56281|TIGR03307
phoA|phoA|AP_001034.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001952|IPR017849|IPR017850|IPR018299	Alkaline phosphatase|Alkaline phosphatase, active site|Alkaline phosphatase-like, alpha/beta/alpha|Alkaline-phosphatase-like, core domain	GO:0003824|GO:0008152|GO:0016791	G3DSA:3.40.720.10|PF00245|PR00113|PS00123|PTHR11596|PTHR11596:SF29|SM00098|SSF53649
phoB|phoB|AP_001049.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001789|IPR001867|IPR011006|IPR011879|IPR011991	CheY-like superfamily|Signal transduction response regulator, C-terminal|Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB|Signal transduction response regulator, receiver domain|Winged helix-turn-helix DNA-binding domain	GO:0000156|GO:0000160|GO:0003677|GO:0006355|GO:0006817	G3DSA:1.10.10.10|G3DSA:3.40.50.2300|PF00072|PF00486|PTHR26402|PTHR26402:SF63|SM00448|SM00862|SSF52172|TIGR02154
phoE|phoE|AP_000894.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001702|IPR001897|IPR013793|IPR017690|IPR023614	Outer membrane insertion C-terminal signal, omp85 target|Porin domain|Porin, Gram-negative type|Porin, Gram-negative type, conserved site|Porin, gammaproteobacterial	GO:0006810|GO:0015288|GO:0016020	G3DSA:2.40.160.10|PF00267|PR00182|PR00183|PS00576|SSF56935|TIGR03304
phoH|phoH|AP_001649.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003714|IPR027417	P-loop containing nucleoside triphosphate hydrolase|PhoH-like protein	GO:0005524	G3DSA:3.40.50.300|PF02562|PTHR30473|SSF52540
phoP|phoP|AP_001756.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001789|IPR001867|IPR011006|IPR011991	CheY-like superfamily|Signal transduction response regulator, C-terminal|Signal transduction response regulator, receiver domain|Winged helix-turn-helix DNA-binding domain	GO:0000156|GO:0000160|GO:0003677|GO:0006355	G3DSA:1.10.10.10|G3DSA:3.40.50.2300|PF00072|PF00486|PS50110|PTHR26402|PTHR26402:SF117|SM00448|SM00862|SSF52172
phoQ|phoQ|AP_001755.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003594|IPR003660|IPR003661|IPR004358|IPR005467|IPR009082|IPR015014	HAMP linker domain|Histidine kinase-like ATPase, ATP-binding domain|PhoQ Sensor|Signal transduction histidine kinase, core|Signal transduction histidine kinase, homodimeric domain|Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal	GO:0000155|GO:0000160|GO:0004673|GO:0004871|GO:0005524|GO:0007165|GO:0016020|GO:0016021|GO:0016310|GO:0016772|GO:0018106|GO:0046872	G3DSA:3.30.565.10|PF00672|PF02518|PF08918|PR00344|PS50109|PS50885|PTHR24423|PTHR24423:SF220|SM00387|SM00388|SSF47384|SSF55874
phoR|phoR|AP_001050.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000014|IPR003594|IPR003661|IPR004358|IPR005467|IPR009082|IPR013767|IPR014310|IPR021766	Histidine kinase-like ATPase, ATP-binding domain|PAS domain|PAS fold|Protein of unknown function DUF3329|Signal transduction histidine kinase, core|Signal transduction histidine kinase, homodimeric domain|Signal transduction histidine kinase, phosphate regulon sensor PhoR|Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal	GO:0000155|GO:0000160|GO:0004673|GO:0004871|GO:0005524|GO:0006355|GO:0007165|GO:0016020|GO:0016021|GO:0016310|GO:0016772	G3DSA:1.10.287.130|G3DSA:3.30.450.20|G3DSA:3.30.565.10|PF00512|PF00989|PF02518|PF11808|PR00344|PS50109|PS50112|PTHR24423|PTHR24423:SF123|SM00091|SM00387|SM00388|SSF47384|SSF55785|SSF55874|TIGR02966
phoU|phoU|AP_004063.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR008170|IPR026022	PhoU|PhoU domain		G3DSA:1.20.58.220|PF01895|PIRSF003107|PTHR10010|PTHR10010:SF14|SSF109755|TIGR02135
php|php|AP_004411.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001559|IPR017947|IPR027280	Aryldialkylphosphatase|Aryldialkylphosphatase, zinc-binding site|Phosphotriesterase homology protein	GO:0008270|GO:0009056|GO:0016788	G3DSA:3.20.20.140|PF02126|PIRSF016839|PS01322|PS51347|PTHR10819|SSF51556
phr|phr|AP_001346.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002081|IPR005101|IPR006050|IPR014729|IPR018394	Cryptochrome/DNA photolyase, class 1|Cryptochrome/DNA photolyase, class 1 conserved site, C-terminal|DNA photolyase, FAD-binding/Cryptochrome, C-terminal|DNA photolyase, N-terminal|Rossmann-like alpha/beta/alpha sandwich fold	GO:0003913|GO:0006281	G3DSA:1.10.579.10|G3DSA:1.25.40.80|G3DSA:3.40.50.620|PF00875|PF03441|PR00147|PS00394|PS00691|PS51645|PTHR11455|SSF48173|SSF52425
pinQ|pinQ|AP_002166.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR006118|IPR006119|IPR006120|IPR009057	Homeodomain-like|Recombinase, conserved site|Resolvase, HTH domain|Resolvase, N-terminal	GO:0000150|GO:0003677|GO:0006310	G3DSA:1.10.10.60|G3DSA:3.40.50.1390|PF00239|PF02796|PS00398|PTHR30461|PTHR30461:SF0|SM00857|SSF46689|SSF53041
pinR|pinR|AP_002000.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR006118|IPR006119|IPR006120|IPR009057	Homeodomain-like|Recombinase, conserved site|Resolvase, HTH domain|Resolvase, N-terminal	GO:0000150|GO:0003677|GO:0006310	G3DSA:1.10.10.60|G3DSA:3.40.50.1390|PF00239|PF02796|PS00398|PTHR30461|PTHR30461:SF0|SM00857|SSF46689|SSF53041
pin|pin|AP_001783.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR006118|IPR006119|IPR006120|IPR009057	Homeodomain-like|Recombinase, conserved site|Resolvase, HTH domain|Resolvase, N-terminal	GO:0000150|GO:0003677|GO:0006310	G3DSA:1.10.10.60|G3DSA:3.40.50.1390|PF00239|PF02796|PS00397|PS00398|PTHR30461|PTHR30461:SF0|SM00857|SSF46689|SSF53041
pioO|pioO|AP_004468.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091				
pitA|pitA|AP_004300.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001204	Phosphate transporter	GO:0005315|GO:0006817|GO:0016020	PF01384|PTHR11101|PTHR11101:SF3
pitB|pitB|AP_003542.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001204	Phosphate transporter	GO:0005315|GO:0006817|GO:0016020	PF01384|PTHR11101|PTHR11101:SF3
pldA|pldA|AP_003979.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003187	Phospholipase A1	GO:0004620|GO:0006629|GO:0016020	G3DSA:2.40.230.10|PF02253|PR01486|SSF56931
pldB|pldB|AP_003975.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000073	Alpha/beta hydrolase fold-1		G3DSA:3.40.50.1820|PF00561|PTHR11614|PTHR11614:SF2|SSF53474
plsB|plsB|AP_004542.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002123|IPR022284	Glycerol-3-phosphate O-acyltransferase|Phospholipid/glycerol acyltransferase	GO:0004366|GO:0008152|GO:0008654|GO:0016020|GO:0016746|GO:0044255	MF_00393|PF01553|PIRSF000437|PIRSF500064|PTHR12563|PTHR12563:SF3|SM00563|SSF69593|TIGR03703
plsC|plsC|AP_003568.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002123|IPR004552	1-acyl-sn-glycerol-3-phosphate acyltransferase|Phospholipid/glycerol acyltransferase	GO:0003841|GO:0008152|GO:0008654|GO:0016020|GO:0016746	G3DSA:3.40.1130.10|PF01553|PTHR10434|PTHR10434:SF0|SM00563|SSF69593|TIGR00530
plsX|plsX|AP_001716.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003664|IPR012281|IPR024084	Fatty acid synthesis PlsX protein|Isopropylmalate dehydrogenase-like domain|Phospholipid biosynthesis protein, PlsX-like	GO:0003824|GO:0006633|GO:0016616|GO:0016747|GO:0055114	G3DSA:3.40.718.10|MF_00019|PF02504|PIRSF002465|PTHR30100|SSF53659|TIGR00182
pmbA|pmbA|AP_004734.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002510	TldD/PmbA		PF01523|PTHR30624|PTHR30624:SF1|SSF111283
pmrD|pmrD|AP_002857.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR020146	Signal transduction protein PmrD		PD028730|PF11183
pncA|pncA|AP_002387.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000868	Isochorismatase-like	GO:0003824|GO:0008152	G3DSA:3.40.50.850|PF00857|PTHR11080|PTHR11080:SF2|SSF52499
pncB|pncB|AP_001561.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002638|IPR006406|IPR007229|IPR015977	Nicotinate phosphoribosyltransferase|Nicotinate phosphoribosyltransferase-like|Nicotinate phosphoribosyltransferase-related|Quinolinate phosphoribosyl transferase, C-terminal	GO:0004514|GO:0004516|GO:0005737|GO:0009435|GO:0019357	G3DSA:3.20.140.10|MF_00570|PF04095|PIRSF000484|PTHR11098|PTHR11098:SF1|SSF51690|SSF54675|TIGR01514
pnp|pnp|AP_003709.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001247|IPR003029|IPR004087|IPR004088|IPR012162|IPR012340|IPR015847|IPR015848|IPR020568|IPR022967|IPR027408	Exoribonuclease, phosphorolytic domain 1|Exoribonuclease, phosphorolytic domain 2|K Homology domain|K Homology domain, type 1|Nucleic acid-binding, OB-fold|PNPase/RNase PH domain|Polynucleotide phosphorylase, phosphorolytic RNA-binding, bacterial/organelle-type|Polyribonucleotide nucleotidyltransferase|RNA-binding domain, S1|Ribosomal protein S1, RNA-binding domain|Ribosomal protein S5 domain 2-type fold	GO:0000175|GO:0003723|GO:0004654|GO:0006396|GO:0006402	G3DSA:1.10.10.400|G3DSA:2.40.50.140|G3DSA:3.30.1370.10|G3DSA:3.30.230.70|MF_01595|PF00013|PF00575|PF01138|PF03725|PF03726|PIRSF005499|PS50084|PS50126|PTHR11252|SM00316|SM00322|SSF46915|SSF50249|SSF54211|SSF54791|SSF55666|TIGR03591
pntA|pntA|AP_002224.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR007698|IPR007886|IPR008142|IPR008143|IPR024605|IPR026255	Alanine dehydrogenase/PNT, NAD(H)-binding domain|Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal|Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-1|Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2|NAD(P) transhydrogenase, alpha subunit|NAD(P) transhydrogenase, alpha subunit, C-terminal	GO:0008746|GO:0015992|GO:0016491|GO:0055114	G3DSA:3.40.50.1770|G3DSA:3.50.50.60|PF01262|PF05222|PF12769|PIRSF000203|PS00836|PS00837|PTHR10160|PTHR10160:SF11|SM01002|SM01003|SSF51735|SSF52283|TIGR00561
pntB|pntB|AP_002223.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR012136	NADP transhydrogenase, beta subunit	GO:0008750|GO:0016021|GO:0050661|GO:0055114	G3DSA:3.40.50.1220|PF02233|PIRSF000204|PTHR10160|PTHR10160:SF6|SSF52467
pnuC|pnuC|AP_001382.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR006419	Nicotinamide mononucleotide transporter PnuC	GO:0016020|GO:0034257|GO:0034258	PF04973|TIGR01528
polA|polA|AP_003944.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001098|IPR002298|IPR002421|IPR002562|IPR003583|IPR008918|IPR012337|IPR018320|IPR019760|IPR020045|IPR020046	3'-5' exonuclease domain|5'-3' exonuclease, C-terminal domain|5'-3' exonuclease, N-terminal|5'-3' exonuclease, alpha-helical arch, N-terminal|DNA polymerase 1|DNA polymerase A|DNA-directed DNA polymerase, family A, conserved site|DNA-directed DNA polymerase, family A, palm domain|Helix-hairpin-helix DNA-binding motif, class 1|Helix-hairpin-helix motif, class 2|Ribonuclease H-like domain	GO:0003676|GO:0003677|GO:0003824|GO:0003887|GO:0006139|GO:0006260|GO:0006281|GO:0008408|GO:0008409	G3DSA:1.10.150.20|G3DSA:1.20.1060.10|G3DSA:3.30.420.10|G3DSA:3.30.70.370|G3DSA:3.40.50.1010|PF00476|PF01367|PF01612|PF02739|PR00868|PS00447|PTHR10133|PTHR10133:SF20|SM00278|SM00279|SM00474|SM00475|SM00482|SSF47807|SSF53098|SSF56672|SSF88723|TIGR00593
polB|polB|AP_000724.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR006133|IPR006134|IPR006172|IPR012337|IPR017964|IPR023211	DNA polymerase, palm domain|DNA-directed DNA polymerase, family B|DNA-directed DNA polymerase, family B, conserved site|DNA-directed DNA polymerase, family B, exonuclease domain|DNA-directed DNA polymerase, family B, multifunctional domain|Ribonuclease H-like domain	GO:0000166|GO:0003676|GO:0003677|GO:0003887|GO:0006139|GO:0006260	G3DSA:3.30.420.10|G3DSA:3.90.1600.10|PF00136|PF03104|PR00106|PS00116|PTHR10322|PTHR10322:SF12|SM00486|SSF53098|SSF56672
potA|potA|AP_001752.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003439|IPR003593|IPR005893|IPR008995|IPR013611|IPR017871|IPR017879|IPR027417	AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter, spermidine/putrescine import ATP-binding protein, PotA|ABC transporter-like|Molybdate/tungstate binding, C-terminal|P-loop containing nucleoside triphosphate hydrolase|Spermidine/putrescine ABC transporter, ATP-binding subunit|Transport-associated OB, type 2	GO:0000166|GO:0005215|GO:0005524|GO:0006810|GO:0015417|GO:0015594|GO:0015595|GO:0015846|GO:0016020|GO:0016820|GO:0016887|GO:0017111|GO:0043190	G3DSA:3.40.50.300|PF00005|PF08402|PS00211|PS50893|PS51305|PTHR24220|PTHR24220:SF150|SM00382|SSF50331|SSF52540|TIGR01187
potB|potB|AP_001751.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000515	Binding-protein-dependent transport systems inner membrane component	GO:0005215|GO:0006810|GO:0016020	G3DSA:1.10.3720.10|PF00528|PS50928|PTHR30193|PTHR30193:SF0|SSF161098
potC|potC|AP_001750.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000515	Binding-protein-dependent transport systems inner membrane component	GO:0005215|GO:0006810|GO:0016020	G3DSA:1.10.3720.10|PF00528|PS50928|PTHR30222|SSF161098
potD|potD|AP_001749.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001188	Bacterial periplasmic spermidine/putrescine-binding protein	GO:0015846|GO:0019808|GO:0042597	G3DSA:3.40.190.10|PF13416|PIRSF019574|PR00909|PTHR30222|SSF53850
potE|potE|AP_001330.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002293|IPR004754|IPR027566	Amino acid antiporter|Amino acid/polyamine transporter I|Putrescine-ornithine antiporter	GO:0003333|GO:0006865|GO:0015171|GO:0015496|GO:0015822|GO:0015847|GO:0016020|GO:0016021	PF13520|PIRSF006060|PTHR11785|PTHR11785:SF127|TIGR00905|TIGR04299
potF|potF|AP_001485.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001188	Bacterial periplasmic spermidine/putrescine-binding protein	GO:0015846|GO:0019808|GO:0042597	G3DSA:3.40.190.10|PF13416|PIRSF019574|PR00909|PTHR30222|SSF53850
potG|potG|AP_001486.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003439|IPR003593|IPR005893|IPR008995|IPR013611|IPR017871|IPR027417	AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|Molybdate/tungstate binding, C-terminal|P-loop containing nucleoside triphosphate hydrolase|Spermidine/putrescine ABC transporter, ATP-binding subunit|Transport-associated OB, type 2	GO:0000166|GO:0005215|GO:0005524|GO:0006810|GO:0015417|GO:0015846|GO:0016820|GO:0016887|GO:0017111|GO:0043190	G3DSA:3.40.50.300|PF00005|PF08402|PS00211|PS50893|PTHR24220|PTHR24220:SF150|SM00382|SSF50331|SSF52540|TIGR01187
potH|potH|AP_001487.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000515	Binding-protein-dependent transport systems inner membrane component	GO:0005215|GO:0006810|GO:0016020	G3DSA:1.10.3720.10|PF00528|PS50928|PTHR30193|PTHR30193:SF0|SSF161098
potI|potI|AP_001488.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000515	Binding-protein-dependent transport systems inner membrane component	GO:0005215|GO:0006810|GO:0016020	G3DSA:1.10.3720.10|PF00528|PS50928|PTHR30222|SSF161098
poxA|poxA|AP_004658.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004364|IPR004525|IPR006195|IPR018149|IPR018150	Aminoacyl-tRNA synthetase, class II|Aminoacyl-tRNA synthetase, class II (D/K/N)|Aminoacyl-tRNA synthetase, class II (D/K/N)-like|Elongation factor P--(R)-beta-lysine ligase|Lysyl-tRNA synthetase, class II, C-terminal	GO:0000166|GO:0004812|GO:0004824|GO:0005524|GO:0005737|GO:0006418|GO:0006430	G3DSA:3.30.930.10|MF_00174|PF00152|PR00982|PS50862|PTHR22594|PTHR22594:SF7|SSF55681|TIGR00462
poxB|poxB|AP_001502.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000399|IPR011766|IPR012000|IPR012001	TPP-binding enzyme, conserved site|Thiamine pyrophosphate enzyme, C-terminal TPP-binding|Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain|Thiamine pyrophosphate enzyme, central domain	GO:0000287|GO:0003824|GO:0030976	G3DSA:3.40.50.1220|G3DSA:3.40.50.970|PF00205|PF02775|PF02776|PS00187|PTHR18968|PTHR18968:SF12|SSF52467|SSF52518
ppa|ppa|AP_004726.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR008162	Inorganic pyrophosphatase	GO:0000287|GO:0004427|GO:0005737|GO:0006796	G3DSA:3.90.80.10|MF_00209|PF00719|PS00387|PTHR10286|SSF50324
ppc|ppc|AP_003854.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR015813|IPR018129|IPR021135|IPR022805	Phosphoenolpyruvate carboxylase|Phosphoenolpyruvate carboxylase, active site|Phosphoenolpyruvate carboxylase, bacterial/plant-type|Pyruvate/Phosphoenolpyruvate kinase-like domain	GO:0003824|GO:0006099|GO:0008964|GO:0015977	G3DSA:1.20.1440.90|MF_00595|PF00311|PR00150|PS00393|PS00781|PTHR30523|SSF51621
ppdA|ppdA|AP_003389.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR012902	Prokaryotic N-terminal methylation site		PF07963|PS00409|SSF54523|TIGR02532
ppdB|ppdB|AP_003388.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR012902|IPR016419	Prepilin peptidase-dependent protein B, predicted|Prokaryotic N-terminal methylation site		PF07963|PIRSF004525|PS00409|TIGR02532
ppdC|ppdC|AP_003386.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR012902|IPR022204	Prepilin peptidase dependent protein C|Prokaryotic N-terminal methylation site		PF12528|PF13544|PS00409|TIGR02532
ppdD|ppdD|AP_000769.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR012902	Prokaryotic N-terminal methylation site		G3DSA:3.30.700.10|PF13544|PS00409|SSF54523|TIGR02532
pphA|pphA|AP_002458.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004843|IPR006186	Metallophosphoesterase domain|Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase	GO:0016787	G3DSA:3.60.21.10|PF00149|PS00125|PTHR11668|PTHR11668:SF143|SSF56300
pphB|pphB|AP_003301.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004843|IPR006186	Metallophosphoesterase domain|Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase	GO:0016787	G3DSA:3.60.21.10|PF00149|PS00125|PTHR11668|PTHR11668:SF143|SSF56300
ppiA|ppiA|AP_004426.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002130|IPR020892	Cyclophilin-like peptidyl-prolyl cis-trans isomerase domain|Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site	GO:0003755|GO:0006457	G3DSA:2.40.100.10|PF00160|PR00153|PS00170|PS50072|PTHR11071|PTHR11071:SF29|SSF50891
ppiB|ppiB|AP_001172.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002130|IPR020892	Cyclophilin-like peptidyl-prolyl cis-trans isomerase domain|Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site	GO:0003755|GO:0006457	G3DSA:2.40.100.10|PF00160|PR00153|PS00170|PS50072|PTHR11071|PTHR11071:SF29|SSF50891
ppiC|ppiC|AP_004021.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000297|IPR023058	Peptidyl-prolyl cis-trans isomerase, PpiC-type|Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site	GO:0016853	G3DSA:3.10.50.40|PF00639|PS01096|PS50198|PTHR10657|SSF54534
ppiD|ppiD|AP_001091.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000297|IPR023058|IPR027304	Peptidyl-prolyl cis-trans isomerase, PpiC-type|Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site|Trigger factor/SurA domain	GO:0016853	G3DSA:3.10.50.40|PF13145|PF13624|PS01096|PS50198|PTHR10657|PTHR10657:SF0|SSF109998|SSF54534
ppk|ppk|AP_003087.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001736|IPR003414|IPR024953|IPR025198|IPR025200	Phospholipase D/Transphosphatidylase|Polyphosphate kinase|Polyphosphate kinase C-terminal domain|Polyphosphate kinase N-terminal domain|Polyphosphate kinase middle domain	GO:0003824|GO:0006799|GO:0008152|GO:0008976|GO:0009358	G3DSA:3.30.1840.10|G3DSA:3.30.870.10|MF_00347|PF02503|PF13089|PF13090|PIRSF015589|PS50035|PTHR30218|PTHR30218:SF0|SSF140356|SSF143724|SSF56024|TIGR03705
pppA|pppA|AP_003527.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000045|IPR010627|IPR014032	Peptidase A24A, N-terminal|Peptidase A24A, prepilin type IV, bacterial|Prepilin type IV endopeptidase, peptidase domain	GO:0004190|GO:0016020	PF01478|PF06750|PR00864|PTHR30487
pps|pps|AP_002322.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000121|IPR002192|IPR006319|IPR008279|IPR013815|IPR013816|IPR015813|IPR018274|IPR023151	ATP-grasp fold, subdomain 1|ATP-grasp fold, subdomain 2|PEP-utilising enzyme, C-terminal|PEP-utilising enzyme, active site|PEP-utilising enzyme, conserved site|PEP-utilising enzyme, mobile domain|Phosphoenolpyruvate synthase|Pyruvate phosphate dikinase, PEP/pyruvate-binding|Pyruvate/Phosphoenolpyruvate kinase-like domain	GO:0003824|GO:0005524|GO:0006090|GO:0008986|GO:0016301|GO:0016310|GO:0016772	G3DSA:3.20.20.60|G3DSA:3.30.1490.20|G3DSA:3.30.470.20|G3DSA:3.50.30.10|PF00391|PF01326|PF02896|PIRSF000854|PS00370|PS00742|PTHR22931|PTHR22931:SF7|SSF51621|SSF52009|SSF56059|TIGR01418
ppx|ppx|AP_003088.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003695|IPR022371	Exopolyphosphatase|Ppx/GppA phosphatase	GO:0000287|GO:0004309|GO:0006798	G3DSA:3.30.420.150|G3DSA:3.30.420.40|PF02541|PTHR30005|SSF109604|SSF53067|TIGR03706
pqiA|pqiA|AP_001580.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR005219|IPR007498	Conserved hypothetical protein CHP00155|Paraquat-inducible protein A		PF04403|PTHR30462|PTHR30462:SF0|TIGR00155
pqiB|pqiB|AP_001581.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003399	Mammalian cell entry-related		PF02470|PTHR30462|PTHR30462:SF0
pqqL|pqqL|AP_002117.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001431|IPR007863|IPR011237|IPR011249|IPR011765	Metalloenzyme, LuxS/M16 peptidase-like|Peptidase M16 domain|Peptidase M16, C-terminal domain|Peptidase M16, N-terminal|Peptidase M16, zinc-binding site	GO:0003824|GO:0004222|GO:0006508|GO:0046872	G3DSA:3.30.830.10|PF00675|PF05193|PS00143|PTHR11851|PTHR11851:SF63|SSF63411
prc|prc|AP_002450.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001478|IPR004447|IPR005151|IPR020992	C-terminal-processing peptidase S41A|Interphotoreceptor retinol-binding|PDZ domain|Tail specific protease, C-terminal	GO:0005515|GO:0006508|GO:0008236	G3DSA:2.30.42.10|G3DSA:3.90.226.10|PF00595|PF03572|PF11818|PS50106|PTHR32060|PTHR32060:SF0|SM00228|SM00245|SSF50156|SSF52096|TIGR00225
prfA|prfA|AP_001836.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000352|IPR004373|IPR005139|IPR014720	Double-stranded RNA-binding-like domain|Peptide chain release factor|Peptide chain release factor 1|Peptide chain release factor class I/class II	GO:0003747|GO:0005737|GO:0006415|GO:0016149	G3DSA:1.20.58.410|G3DSA:3.30.160.20|MF_00093|PF00472|PF03462|PS00745|PTHR11075|PTHR11075:SF23|SM00937|SSF75620|TIGR00019
prfB|prfB|AP_003450.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000352|IPR004374|IPR005139|IPR014720|IPR020853	Double-stranded RNA-binding-like domain|Peptide chain release factor|Peptide chain release factor 2|Peptide chain release factor 2, bacterial|Peptide chain release factor class I/class II	GO:0003747|GO:0005737|GO:0006415|GO:0016149	G3DSA:1.20.58.410|G3DSA:3.30.160.20|MF_00094|PF00472|PF03462|PS00745|PTHR11075|PTHR11075:SF6|SM00937|SSF75620|TIGR00020
prfC|prfC|AP_004862.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000795|IPR004161|IPR004548|IPR005225|IPR009000|IPR009022|IPR027417	Elongation factor G, III-V domain|Elongation factor, GTP-binding domain|P-loop containing nucleoside triphosphate hydrolase|Peptide chain release factor 3|Small GTP-binding protein domain|Translation elongation factor EFTu/EF1A, domain 2|Translation elongation/initiation factor/Ribosomal, beta-barrel	GO:0003924|GO:0005525|GO:0005737|GO:0006415|GO:0016149	G3DSA:2.40.30.10|G3DSA:3.30.70.870|G3DSA:3.40.50.300|MF_00072|PF00009|PF03144|PR00315|PS00301|PTHR23115|PTHR23115:SF69|SSF50447|SSF52540|SSF54980|TIGR00231|TIGR00503
prfH|prfH|AP_000889.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000352|IPR014720|IPR017509	Double-stranded RNA-binding-like domain|Peptide chain release factor class I/class II|Putative peptide chain release factor H	GO:0003747|GO:0006415	G3DSA:3.30.160.20|PF00472|PTHR11075|PTHR11075:SF27|SSF75620|TIGR03072
priA|priA|AP_003874.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001650|IPR005259|IPR011545|IPR014001|IPR027417	DNA/RNA helicase, DEAD/DEAH box type, N-terminal|Helicase, C-terminal|Helicase, superfamily 1/2, ATP-binding domain|P-loop containing nucleoside triphosphate hydrolase|Primosomal protein n	GO:0003676|GO:0003677|GO:0004386|GO:0005524|GO:0006260|GO:0008026	G3DSA:3.40.50.300|PF00270|PF00271|PTHR30580|SM00487|SM00490|SSF52540|TIGR00595
priB|priB|AP_004701.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000424|IPR012340|IPR023646	Nucleic acid-binding, OB-fold|Primosomal replication protein PriB|Primosome PriB/single-strand DNA-binding	GO:0003697|GO:0006260|GO:0030894	G3DSA:2.40.50.140|MF_00720|PF00436|PIRSF003135|PS50935|SSF50249
priC|priC|AP_001116.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR010890	Primosomal replication PriB/PriC		PF07445
prkB|prkB|AP_004434.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR006082|IPR006083|IPR027417	P-loop containing nucleoside triphosphate hydrolase|Phosphoribulokinase|Phosphoribulokinase/uridine kinase	GO:0005524|GO:0005975|GO:0008152|GO:0008974|GO:0016301	G3DSA:3.40.50.300|PF00485|PR00478|PS00567|PTHR10285|PTHR10285:SF44|SSF52540
prlC|prlC|AP_004295.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001567|IPR024077|IPR024079|IPR024080	Metallopeptidase, catalytic domain|Neurolysin/Thimet oligopeptidase, N-terminal|Neurolysin/Thimet oligopeptidase, domain 2|Peptidase M3A/M3B	GO:0004222|GO:0006508|GO:0008237	G3DSA:1.10.1370.10|G3DSA:1.20.1050.40|G3DSA:3.40.390.10|PF01432|PTHR11804|PTHR11804:SF7|SSF55486
prmA|prmA|AP_003799.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004498|IPR010456	Ribosomal L11 methyltransferase, PrmA|Ribosomal protein L11 methyltransferase	GO:0005737|GO:0006479|GO:0008276	G3DSA:3.40.50.150|MF_00735|PF06325|PIRSF000401|PTHR18895|PTHR18895:SF3|SSF53335|TIGR00406
prmB|prmB|AP_002930.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002052|IPR004556|IPR007848|IPR017127	DNA methylase, N-6 adenine-specific, conserved site|Methyltransferase small domain|Modification methylase HemK|Ribosomal protein L3-specific, glutamine-N5-methyltransferase	GO:0003676|GO:0005622|GO:0006479|GO:0008168|GO:0008276|GO:0009007|GO:0032259|GO:0032775	G3DSA:1.10.8.10|G3DSA:3.40.50.150|MF_02125|PF05175|PIRSF037167|PS00092|PTHR18895|PTHR18895:SF7|SSF53335|TIGR00536|TIGR03533
prmC|prmC|AP_001837.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002052|IPR004556|IPR019874|IPR025714	DNA methylase, N-6 adenine-specific, conserved site|Methyltransferase domain|Modification methylase HemK|Protein-(glutamine-N5) methyltransferase, release factor-specific	GO:0003676|GO:0006479|GO:0008168|GO:0008276|GO:0032259	G3DSA:1.10.8.10|G3DSA:3.40.50.150|MF_02126|PF13847|PS00092|PTHR18895|PTHR18895:SF7|SSF53335|TIGR00536|TIGR03534
proA|proA|AP_000896.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000965|IPR012134|IPR015590|IPR016161|IPR016162|IPR016163|IPR020593	Aldehyde dehydrogenase domain|Aldehyde dehydrogenase, C-terminal|Aldehyde dehydrogenase, N-terminal|Aldehyde/histidinol dehydrogenase|Gamma-glutamyl phosphate reductase GPR|Gamma-glutamyl phosphate reductase GPR, conserved site|Glutamate-5-semialdehyde dehydrogenase	GO:0004350|GO:0006561|GO:0008152|GO:0016491|GO:0016620|GO:0050661|GO:0055114	G3DSA:3.40.309.10|G3DSA:3.40.605.10|MF_00412|PF00171|PIRSF000151|PS01223|PTHR11063|PTHR11063:SF1|SSF53720|TIGR00407
proB|proB|AP_000895.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001048|IPR001057|IPR002478|IPR005715|IPR011529|IPR015947|IPR019797	Aspartate/glutamate/uridylate kinase|Glutamate 5-kinase|Glutamate 5-kinase, conserved site|Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase|Glutamate/acetylglutamate kinase|PUA-like domain|Pseudouridine synthase/archaeosine transglycosylase	GO:0003723|GO:0004349|GO:0005737|GO:0006561|GO:0008652	G3DSA:2.30.130.10|G3DSA:3.40.1160.10|MF_00456|PF00696|PF01472|PIRSF000729|PR00474|PS00902|PS50890|PTHR11063|SM00359|SSF53633|SSF88697|TIGR01027
proC|proC|AP_001037.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000304|IPR004455|IPR008927|IPR016040	6-phosphogluconate dehydrogenase, C-terminal-like|NAD(P)-binding domain|NADP oxidoreductase, coenzyme F420-dependent|Pyrroline-5-carboxylate reductase	GO:0004735|GO:0006561|GO:0016491|GO:0055114	G3DSA:1.10.3730.10|G3DSA:3.40.50.720|PF03807|PIRSF000193|PS00521|PTHR11645|SSF48179|SSF51735|TIGR00112
proP|proP|AP_004612.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004736|IPR005828|IPR005829|IPR015041|IPR016196|IPR020846	Citrate-proton symport|General substrate transporter|Major facilitator superfamily domain|Major facilitator superfamily domain, general substrate transporter|Osmosensory transporter coiled coil|Sugar transporter, conserved site	GO:0005215|GO:0006810|GO:0016020|GO:0016021|GO:0022857|GO:0055085	G3DSA:1.20.1250.20|PF00083|PF08946|PS00216|PS50850|PTHR24063|PTHR24063:SF153|SSF103473|SSF103661|TIGR00883
proQ|proQ|AP_002451.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR016103|IPR023529	Fertility inhibition FinO/ProQ|Transporter ProP effector, ProQ		G3DSA:1.10.1710.10|MF_00749|PF04352|SM00945|SSF48657
proS|proS|AP_000855.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002314|IPR002316|IPR004154|IPR004500|IPR006195|IPR007214|IPR023717	Aminoacyl-tRNA synthetase, class II|Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain|Anticodon-binding|Proline-tRNA ligase, class IIa|Prolyl-tRNA synthetase, class IIa, bacterial-type|Prolyl-tRNA synthetase, class IIa, type 1|YbaK/aminoacyl-tRNA synthetase-associated domain	GO:0000166|GO:0002161|GO:0004812|GO:0004827|GO:0005524|GO:0005737|GO:0006418|GO:0006433	G3DSA:3.30.930.10|G3DSA:3.40.50.800|G3DSA:3.90.960.10|MF_01569|PF00587|PF03129|PF04073|PR01046|PS50862|PTHR11451|PTHR11451:SF3|SSF52954|SSF55681|SSF55826|TIGR00409
proV|proV|AP_003250.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000644|IPR003439|IPR003593|IPR005892|IPR017871|IPR027417	AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|Cystathionine beta-synthase, core|Glycine betaine transport ATP-binding subunit|P-loop containing nucleoside triphosphate hydrolase	GO:0000166|GO:0005515|GO:0005524|GO:0016020|GO:0016887|GO:0017111|GO:0031460	G3DSA:3.10.580.10|G3DSA:3.40.50.300|PF00005|PF00571|PS00211|PS50893|PS51371|PTHR24220|PTHR24220:SF125|SM00116|SM00382|SSF52540|SSF54631|TIGR01186
proW|proW|AP_003251.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000515	Binding-protein-dependent transport systems inner membrane component	GO:0005215|GO:0006810|GO:0016020	G3DSA:1.10.3720.10|PF00528|PS50928|PTHR30177|PTHR30177:SF0|SSF161098
proX|proX|AP_003252.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR007210	ABC-type glycine betaine transport system, substrate-binding domain	GO:0005215|GO:0006810	G3DSA:3.40.190.10|G3DSA:3.40.190.100|PF04069|SSF53850
proY|proY|AP_001052.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002293|IPR004840|IPR004841	Amino acid permease domain|Amino acid permease, conserved site|Amino acid/polyamine transporter I	GO:0003333|GO:0006810|GO:0006865|GO:0015171|GO:0016020|GO:0016021|GO:0055085	PF00324|PIRSF006060|PS00218|PTHR11785|PTHR11785:SF29
prpB|prpB|AP_000984.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR012695|IPR015813|IPR018523	Isocitrate lyase/phosphorylmutase, conserved site|Methylisocitrate lyase|Pyruvate/Phosphoenolpyruvate kinase-like domain	GO:0003824|GO:0008152|GO:0019629|GO:0046421	G3DSA:3.20.20.60|PF13714|PS00161|PTHR21631|PTHR21631:SF4|SSF51621|TIGR02317
prpC|prpC|AP_000985.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002020|IPR011278|IPR016141|IPR016142|IPR016143|IPR019810|IPR024176	2-methylcitrate synthase/citrate synthase type I|Citrate synthase active site|Citrate synthase, bacterial-type|Citrate synthase-like|Citrate synthase-like, core|Citrate synthase-like, large alpha subdomain|Citrate synthase-like, small alpha subdomain	GO:0005737|GO:0006099|GO:0044262|GO:0046912	G3DSA:1.10.230.10|G3DSA:1.10.580.10|PF00285|PIRSF001369|PR00143|PS00480|PTHR11739|PTHR11739:SF0|SSF48256|TIGR01800
prpD|prpD|AP_000986.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR005656|IPR012705	2-methylcitrate dehydratase PrpD|MmgE/PrpD	GO:0019543|GO:0019629|GO:0047547|GO:0051537	G3DSA:3.30.1330.120|PF03972|PTHR16943|PTHR16943:SF7|SSF103378|TIGR02330
prpE|prpE|AP_000987.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000873|IPR012694|IPR020845|IPR024597|IPR025110	AMP-binding, conserved site|AMP-dependent synthetase/ligase|Acyl-CoA synthase, domain of unknown function DUF3448|Domain of unknown function DUF4009|Propionate--CoA ligase	GO:0003824|GO:0008152|GO:0019629|GO:0050218	G3DSA:2.30.38.10|G3DSA:3.30.300.30|G3DSA:3.40.50.980|PF00501|PF11930|PF13193|PS00455|PTHR24095|PTHR24095:SF0|SSF56801|TIGR02316
prpR|prpR|AP_000983.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002078|IPR002197|IPR003593|IPR009057|IPR010524|IPR012704|IPR025943|IPR025944|IPR027417	AAA+ ATPase domain|DNA binding HTH domain,  Fis-type|Homeodomain-like|P-loop containing nucleoside triphosphate hydrolase|RNA polymerase sigma factor 54 interaction domain|Sigma-54 interaction domain, ATP-binding site 2|Sigma-54 interaction domain, conserved site|Signal transduction response regulator, propionate catabolism activator, N-terminal|Signal transduction response regulator, propionate catabolism, transcriptional regulator PrpR	GO:0000156|GO:0000160|GO:0000166|GO:0003677|GO:0003700|GO:0005524|GO:0005737|GO:0006355|GO:0008134|GO:0017111|GO:0019629	G3DSA:1.10.10.60|G3DSA:1.10.8.60|G3DSA:1.20.5.170|G3DSA:3.40.50.10660|G3DSA:3.40.50.2300|G3DSA:3.40.50.300|PF00158|PF02954|PF06506|PS00676|PS00688|PS50045|PTHR32071|SM00382|SSF159800|SSF46689|SSF52540|TIGR02329
prsA|prsA|AP_001832.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000836|IPR000842|IPR005946	Phosphoribosyl pyrophosphate synthetase, conserved site|Phosphoribosyltransferase domain|Ribose-phosphate diphosphokinase	GO:0000287|GO:0004749|GO:0009116|GO:0009156|GO:0009165|GO:0044249	G3DSA:3.40.50.2020|MF_00583_B|PF00156|PF13793|PS00114|PTHR10210|SSF53271|TIGR01251
psd|psd|AP_004663.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003817|IPR005221	Phosphatidylserine decarboxylase|Phosphatidylserine decarboxylase-related	GO:0004609|GO:0008654	MF_00662|PF02666|PTHR10067|PTHR10067:SF0|TIGR00163
psiF|psiF|AP_001035.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR011690	Phosphate-starvation-induced PsiF repeat		PF07769
pspA|pspA|AP_001930.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR007157|IPR014319	Phage shock protein, PspA|PspA/IM30		PF04012|PTHR31088|TIGR02977
pspB|pspB|AP_001931.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR009554	Phage shock protein, PspB	GO:0006355|GO:0009271	PF06667|TIGR02976
pspC|pspC|AP_001932.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR007168|IPR014320	Phage shock protein, PspC|Phage shock protein, PspC, N-terminal		PF04024|TIGR02978
pspD|pspD|AP_001933.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR014321	Phage shock protein, PspD		PF09584|TIGR02979
pspE|pspE|AP_001934.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001763|IPR014323	Phage shock protein, PspE|Rhodanese-like domain		G3DSA:3.40.250.10|PF00581|PS50206|PTHR13253|PTHR13253:SF30|SM00450|SSF52821|TIGR02981
pspF|pspF|AP_001929.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002078|IPR002197|IPR003593|IPR009057|IPR014317|IPR025943|IPR025944|IPR027417	AAA+ ATPase domain|DNA binding HTH domain,  Fis-type|Homeodomain-like|P-loop containing nucleoside triphosphate hydrolase|RNA polymerase sigma factor 54 interaction domain|Sigma-54 interaction domain, ATP-binding site 2|Sigma-54 interaction domain, conserved site|Transcription activator PspF	GO:0000166|GO:0003677|GO:0003700|GO:0005524|GO:0006355|GO:0008134|GO:0017111	G3DSA:1.10.10.60|G3DSA:1.10.8.60|G3DSA:3.40.50.300|PF00158|PF02954|PR01590|PS00676|PS00688|PS50045|PTHR10919|PTHR10919:SF2|SM00382|SSF46689|SSF52540|TIGR02974
pssA|pssA|AP_003171.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001736|IPR016270	Phospholipase D, phosphatidylserine synthase type|Phospholipase D/Transphosphatidylase	GO:0003824|GO:0008152|GO:0008654|GO:0016780	G3DSA:3.30.870.10|PF00614|PIRSF000850|PS50035|PTHR12586|SM00155|SSF56024
pstA|pstA|AP_004061.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000515|IPR005672	Binding-protein-dependent transport systems inner membrane component|Phosphate transport system permease protein PstA	GO:0005215|GO:0005315|GO:0005887|GO:0006810|GO:0016020|GO:0035435	G3DSA:1.10.3720.10|PF00528|PS50928|PTHR30425|PTHR30425:SF0|SSF161098|TIGR00974
pstB|pstB|AP_004062.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003439|IPR003593|IPR005670|IPR015850|IPR017871|IPR027417	AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter, phosphate import, PstB|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase|Phosphate transport system permease protein 1	GO:0000166|GO:0005315|GO:0005524|GO:0006817|GO:0015415|GO:0016020|GO:0016887|GO:0017111|GO:0035435	G3DSA:3.40.50.300|PF00005|PS00211|PS50893|PS51238|PTHR24220|PTHR24220:SF76|SM00382|SSF52540|TIGR00972
pstC|pstC|AP_004060.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000515|IPR011864	Binding-protein-dependent transport systems inner membrane component|Phosphate ABC transporter, permease protein PstC	GO:0005215|GO:0005315|GO:0006810|GO:0006817|GO:0016020|GO:0016021	G3DSA:1.10.3720.10|PF00528|PS50928|PTHR30425|PTHR30425:SF1|SSF161098|TIGR02138
pstS|pstS|AP_004059.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR005673|IPR024370	ABC transporter, phosphate-binding protein PstS|PBP domain	GO:0035435|GO:0042301|GO:0043190	G3DSA:3.40.190.10|PF12849|PIRSF002756|PTHR30570|PTHR30570:SF0|SSF53850|TIGR00975
pta|pta|AP_002897.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002505|IPR004614|IPR010766|IPR016475|IPR027417	DRTGG|P-loop containing nucleoside triphosphate hydrolase|Phosphate acetyl/butaryl transferase|Phosphate acetyltransferase|Phosphate acetyltransferase, bacteria	GO:0008152|GO:0008959|GO:0016407|GO:0016746	G3DSA:3.40.1390.20|G3DSA:3.40.50.10750|G3DSA:3.40.50.300|PF01515|PF07085|PF13500|PIRSF006107|PTHR23406|PTHR23406:SF3|SSF52540|SSF53659|SSF75138|TIGR00651
pth|pth|AP_001829.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001328|IPR018171	Peptidyl-tRNA hydrolase|Peptidyl-tRNA hydrolase, conserved site	GO:0004045	G3DSA:3.40.50.1470|MF_00083|PF01195|PS01195|PS01196|PTHR17224|PTHR17224:SF0|SSF53178|TIGR00447
ptrB|ptrB|AP_002465.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001375|IPR002470|IPR002471|IPR004106|IPR023302	Peptidase S9, prolyl oligopeptidase, catalytic domain|Peptidase S9, serine active site|Peptidase S9A, oligopeptidase, N-terminal|Peptidase S9A, prolyl oligopeptidase|Peptidase S9A/B/C, oligopeptidase, N-terminal beta-propeller	GO:0004252|GO:0006508|GO:0008236|GO:0070008	G3DSA:2.130.10.120|G3DSA:3.40.50.1820|PF00326|PF02897|PR00862|PS00708|PTHR11757|PTHR11757:SF3|SSF50993|SSF53474
ptr|ptr|AP_003384.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001431|IPR007863|IPR011237|IPR011249|IPR011765	Metalloenzyme, LuxS/M16 peptidase-like|Peptidase M16 domain|Peptidase M16, C-terminal domain|Peptidase M16, N-terminal|Peptidase M16, zinc-binding site	GO:0003824|GO:0004222|GO:0006508|GO:0046872	G3DSA:3.30.830.10|PF00675|PF05193|PS00143|PTHR11851|PTHR11851:SF67|SSF63411
ptsA|ptsA|AP_003862.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000032|IPR000121|IPR001020|IPR002178|IPR005698|IPR006318|IPR008279|IPR008731|IPR015813|IPR016152|IPR018274|IPR023151	PEP-utilising enzyme, C-terminal|PEP-utilising enzyme, active site|PEP-utilising enzyme, conserved site|PEP-utilising enzyme, mobile domain|Phosphoenolpyruvate-utilising enzyme|Phosphotransferase system, HPr histidine phosphorylation site|Phosphotransferase system, PEP-utilising enzyme, N-terminal|Phosphotransferase system, phosphocarrier HPr protein|Phosphotransferase system, phosphocarrier HPr protein-like|Phosphotransferase system, phosphoenolpyruvate-dependent sugar EIIA 2|Phosphotransferase/anion transporter|Pyruvate/Phosphoenolpyruvate kinase-like domain	GO:0003824|GO:0005215|GO:0005351|GO:0005737|GO:0006810|GO:0008965|GO:0009401|GO:0016310|GO:0016772	G3DSA:1.10.274.10|G3DSA:3.20.20.60|G3DSA:3.30.1340.10|G3DSA:3.40.930.10|G3DSA:3.50.30.10|PF00359|PF00381|PF00391|PF02896|PF05524|PR01736|PS00369|PS00370|PS00742|PS51094|PS51350|PTHR22931|PTHR22931:SF10|SSF47831|SSF51621|SSF52009|SSF55594|SSF55804|TIGR01417
ptsG|ptsG|AP_001727.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001996|IPR003352|IPR004719|IPR011299|IPR011535|IPR013013|IPR018113	Phosphotransferase system EIIB/cysteine, phosphorylation site|Phosphotransferase system, EIIB component, type 1|Phosphotransferase system, EIIC|Phosphotransferase system, EIIC component, type 1|Phosphotransferase system, glucose-like IIB component|Phosphotransferase system, glucose-specific IIBC component|Phosphotransferase system, maltose/glucose-specific IIC component	GO:0005351|GO:0005355|GO:0006810|GO:0008982|GO:0009401|GO:0015758|GO:0016020|GO:0016021	G3DSA:3.30.1360.60|PF00367|PF02378|PS01035|PS51098|PS51103|PTHR30009|PTHR30009:SF1|SSF55604|TIGR00826|TIGR00852|TIGR02002
ptsH|ptsH|AP_003009.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000032|IPR001020|IPR002114|IPR005698	Phosphotransferase system, HPr histidine phosphorylation site|Phosphotransferase system, HPr serine phosphorylation site|Phosphotransferase system, phosphocarrier HPr protein|Phosphotransferase system, phosphocarrier HPr protein-like	GO:0005351|GO:0006810|GO:0009401	G3DSA:3.30.1340.10|PF00381|PR00107|PS00369|PS00589|PS51350|SSF55594|TIGR01003
ptsI|ptsI|AP_003010.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000121|IPR006318|IPR008279|IPR008731|IPR015813|IPR018274|IPR023151|IPR024692	PEP-utilising enzyme, C-terminal|PEP-utilising enzyme, active site|PEP-utilising enzyme, conserved site|PEP-utilising enzyme, mobile domain|Phosphoenolpyruvate-protein phosphotransferase|Phosphoenolpyruvate-utilising enzyme|Phosphotransferase system, PEP-utilising enzyme, N-terminal|Pyruvate/Phosphoenolpyruvate kinase-like domain	GO:0003824|GO:0005351|GO:0005737|GO:0008965|GO:0009401|GO:0016310|GO:0016772	G3DSA:1.10.274.10|G3DSA:3.20.20.60|G3DSA:3.50.30.10|PF00391|PF02896|PF05524|PIRSF000732|PR01736|PS00370|PS00742|PTHR22931|PTHR22931:SF10|SSF47831|SSF51621|SSF52009|TIGR01417
ptsN|ptsN|AP_003747.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002178|IPR006320|IPR016152	Phosphotransferase system, IIA-like nitrogen-regulatory protein PtsN|Phosphotransferase system, phosphoenolpyruvate-dependent sugar EIIA 2|Phosphotransferase/anion transporter	GO:0005215|GO:0005351|GO:0006810|GO:0008982|GO:0009401	G3DSA:3.40.930.10|PF00359|PS00372|PS51094|SSF55804|TIGR01419
ptsP|ptsP|AP_003392.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000121|IPR003018|IPR006318|IPR008279|IPR008731|IPR015813|IPR018274|IPR023151	GAF domain|PEP-utilising enzyme, C-terminal|PEP-utilising enzyme, active site|PEP-utilising enzyme, conserved site|PEP-utilising enzyme, mobile domain|Phosphoenolpyruvate-utilising enzyme|Phosphotransferase system, PEP-utilising enzyme, N-terminal|Pyruvate/Phosphoenolpyruvate kinase-like domain	GO:0003824|GO:0005351|GO:0005515|GO:0005737|GO:0008965|GO:0009401|GO:0016310|GO:0016772	G3DSA:1.10.274.10|G3DSA:3.20.20.60|G3DSA:3.30.450.40|G3DSA:3.50.30.10|PF00391|PF01590|PF02896|PF05524|PR01736|PS00370|PS00742|PTHR22931|PTHR22931:SF10|SM00065|SSF47831|SSF51621|SSF52009|SSF55781|TIGR01417
purA|purA|AP_004677.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001114|IPR018220|IPR027417	Adenylosuccinate synthase, active site|Adenylosuccinate synthetase|P-loop containing nucleoside triphosphate hydrolase	GO:0004019|GO:0005525|GO:0005737|GO:0006164	G3DSA:1.10.300.10|G3DSA:3.40.440.10|G3DSA:3.90.170.10|MF_00011|PF00709|PS00513|PS01266|PTHR11846|SM00788|SSF52540|TIGR00184
purB|purB|AP_001757.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000362|IPR004769|IPR008948|IPR013539|IPR020557|IPR022761|IPR024083	Adenylosuccinate lyase|Adenylosuccinate lyase C-terminal/plant|Fumarase/histidase, N-terminal|Fumarate lyase|Fumarate lyase, N-terminal|Fumarate lyase, conserved site|L-Aspartase-like	GO:0003824|GO:0004018|GO:0006188|GO:0009152	G3DSA:1.10.275.10|G3DSA:1.10.40.30|G3DSA:1.20.200.10|PF00206|PF08328|PR00149|PS00163|PTHR11444|PTHR11444:SF2|SSF48557|TIGR00928
purC|purC|AP_003062.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001636|IPR013816|IPR018236	ATP-grasp fold, subdomain 2|SAICAR synthetase|SAICAR synthetase, conserved site	GO:0004639|GO:0005524|GO:0006164	G3DSA:3.30.200.20|G3DSA:3.30.470.20|MF_00137|PF01259|PS01057|PS01058|PTHR11609|PTHR11609:SF3|SSF56104|TIGR00081
purD|purD|AP_003813.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000115|IPR011054|IPR011761|IPR013815|IPR013816|IPR016185|IPR020559|IPR020560|IPR020561|IPR020562	ATP-grasp fold|ATP-grasp fold, subdomain 1|ATP-grasp fold, subdomain 2|Phosphoribosylglycinamide synthetase|Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain|Phosphoribosylglycinamide synthetase, C-domain|Phosphoribosylglycinamide synthetase, N-terminal|Phosphoribosylglycinamide synthetase, conserved site|Pre-ATP-grasp domain|Rudiment single hybrid motif	GO:0003824|GO:0004637|GO:0005524|GO:0009113|GO:0046872	G3DSA:3.30.1490.20|G3DSA:3.30.470.20|G3DSA:3.40.50.20|G3DSA:3.90.600.10|MF_00138|PF01071|PF02843|PF02844|PS00184|PS50975|PTHR10520|SSF51246|SSF52440|SSF56059|TIGR00877
purE|purE|AP_001170.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000031|IPR024694	N5-carboxyaminoimidazole ribonucleotide mutase PurE|N5-carboxyaminoimidazole ribonucleotide mutase PurE domain	GO:0006189|GO:0034023	G3DSA:3.40.50.7700|PF00731|PIRSF001338|PTHR23046|SM01001|SSF52255|TIGR01162
purF|purF|AP_002912.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000583|IPR000836|IPR005854|IPR017932	Amidophosphoribosyl transferase|Class II glutamine amidotransferase domain|Glutamine amidotransferase type 2 domain|Phosphoribosyltransferase domain	GO:0004044|GO:0008152|GO:0009113|GO:0009116	G3DSA:3.40.50.2020|G3DSA:3.60.20.10|PF00156|PF00310|PIRSF000485|PS51278|PTHR11907|PTHR11907:SF0|SSF53271|SSF56235|TIGR01134
purH|purH|AP_003812.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002695|IPR011607|IPR016193|IPR024051	AICAR transformylase domain|AICARFT/IMPCHase bienzyme|Cytidine deaminase-like|Methylglyoxal synthase-like domain	GO:0003824|GO:0003937|GO:0004643|GO:0006164	G3DSA:3.40.140.20|G3DSA:3.40.50.1380|MF_00139|PF01808|PF02142|PIRSF000414|PTHR11692|SM00798|SM00851|SSF52335|SSF53927|TIGR00355
purK|purK|AP_001169.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003135|IPR005875|IPR011054|IPR011761|IPR013816|IPR016185	ATP-grasp fold|ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type|ATP-grasp fold, subdomain 2|Phosphoribosylaminoimidazole carboxylase, ATPase subunit|Pre-ATP-grasp domain|Rudiment single hybrid motif	GO:0004638|GO:0005524|GO:0006189|GO:0046872	G3DSA:3.30.470.20|G3DSA:3.40.50.20|PF02222|PS50975|PTHR23047|PTHR23047:SF1|SSF51246|SSF52440|SSF56059|TIGR01161
purL|purL|AP_003143.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000728|IPR010073|IPR010918|IPR016188|IPR017926|IPR022940	AIR synthase related protein, N-terminal domain|AIR synthase-related protein, C-terminal domain|Glutamine amidotransferase|Phosphoribosylformylglycinamidine synthase|Phosphoribosylformylglycinamidine synthase, bacterial|PurM, N-terminal-like	GO:0003824|GO:0004642|GO:0005737|GO:0006164|GO:0006189|GO:0006541	G3DSA:3.30.1330.10|G3DSA:3.40.50.880|MF_00419|PF00586|PF02769|PF13507|PS51273|PTHR10099|SSF109736|SSF52317|SSF55326|SSF56042|SSF82697|TIGR01735
purM|purM|AP_003085.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000728|IPR004733|IPR010918|IPR016188	AIR synthase related protein, N-terminal domain|AIR synthase-related protein, C-terminal domain|Phosphoribosylformylglycinamidine cyclo-ligase|PurM, N-terminal-like	GO:0003824|GO:0004641|GO:0005737|GO:0006189	G3DSA:3.30.1330.10|G3DSA:3.90.650.10|MF_00741_B|PF00586|PF02769|PTHR24649|PTHR24649:SF5|SSF55326|SSF56042|TIGR00878
purN|purN|AP_003086.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001555|IPR002376|IPR004607	Formyl transferase, N-terminal|Phosphoribosylglycinamide formyltransferase|Phosphoribosylglycinamide formyltransferase, active site	GO:0004644|GO:0006189|GO:0008168|GO:0009058|GO:0016742	G3DSA:3.40.50.170|PF00551|PS00373|PTHR10520|PTHR10520:SF9|SSF53328|TIGR00639
purR|purR|AP_002280.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000843|IPR010982|IPR023588	Lambda repressor-like, DNA-binding domain|Transcription regulator HTH, LacI|Transcription regulator HTH, PurR	GO:0003677|GO:0003700|GO:0005622|GO:0006355	G3DSA:1.10.260.40|G3DSA:3.40.50.2300|MF_01277|PF00356|PF13377|PR00036|PS00356|PS50932|PTHR30146|PTHR30146:SF7|SM00354|SSF47413|SSF53822
purT|purT|AP_002469.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003135|IPR005862|IPR011054|IPR013815|IPR013816|IPR016185	ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type|ATP-grasp fold, subdomain 1|ATP-grasp fold, subdomain 2|Phosphoribosylglycinamide formyltransferase 2|Pre-ATP-grasp domain|Rudiment single hybrid motif	GO:0000287|GO:0003824|GO:0004644|GO:0005524|GO:0009152|GO:0016742	G3DSA:3.30.1490.20|G3DSA:3.30.470.20|G3DSA:3.40.50.20|PF02222|PTHR23047|PTHR23047:SF2|SSF51246|SSF52440|SSF56059|TIGR01142
purU|purU|AP_001858.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002376|IPR002912|IPR004810	ACT domain|Formyl transferase, N-terminal|Formyltetrahydrofolate deformylase	GO:0006189|GO:0008152|GO:0008864|GO:0009058|GO:0016597|GO:0016742	G3DSA:3.30.70.260|G3DSA:3.40.50.170|PF00551|PF01842|PIRSF036480|PR01575|PTHR10520|PTHR10520:SF7|SSF53328|SSF55021|TIGR00655
putA|putA|AP_001645.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002872|IPR005933|IPR010985|IPR015590|IPR016160|IPR016161|IPR016162|IPR016163|IPR024082|IPR024089|IPR024090|IPR025703	Aldehyde dehydrogenase domain|Aldehyde dehydrogenase, C-terminal|Aldehyde dehydrogenase, N-terminal|Aldehyde dehydrogenase, conserved site|Aldehyde/histidinol dehydrogenase|Bifunctional protein PutA|Delta-1-pyrroline-5-carboxylate dehydrogenase 3|Proline dehydrogenase|Proline dehydrogenase PutA, domain I|Proline dehydrogenase PutA, domain I/II|Proline dehydrogenase PutA, domain II|Ribbon-helix-helix	GO:0003700|GO:0003842|GO:0004657|GO:0006355|GO:0006537|GO:0006561|GO:0006562|GO:0008152|GO:0010133|GO:0016491|GO:0016620|GO:0055114	G3DSA:1.10.2060.10|G3DSA:1.20.5.550|G3DSA:3.20.20.220|G3DSA:3.40.309.10|G3DSA:3.40.605.10|PF00171|PF01619|PIRSF000197|PS00070|PS00687|PTHR11699|PTHR11699:SF16|SSF47598|SSF51730|SSF53720|SSF81935|TIGR01238
putP|putP|AP_001646.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001734|IPR011851|IPR018212|IPR019900	Sodium/proline symporter|Sodium/solute symporter|Sodium/solute symporter, conserved site|Sodium/solute symporter, subgroup	GO:0005215|GO:0005298|GO:0006810|GO:0006814|GO:0015824|GO:0016020|GO:0016021|GO:0031402|GO:0055085	PF00474|PS00456|PS00457|PS50283|PTHR11819|PTHR11819:SF81|TIGR00813|TIGR02121
puuA|puuA|AP_001923.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR008146|IPR008147|IPR014746|IPR027303	Glutamine synthetase, beta-Grasp|Glutamine synthetase, catalytic domain|Glutamine synthetase, glycine-rich site|Glutamine synthetase/guanido kinase, catalytic domain	GO:0003824|GO:0004356|GO:0006542|GO:0006807	G3DSA:3.10.20.70|G3DSA:3.30.590.10|PF00120|PS00181|PTHR20852|PTHR20852:SF7|SSF54368|SSF55931
puuB|puuB|AP_001927.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR006076	FAD dependent oxidoreductase	GO:0016491|GO:0055114	G3DSA:3.50.50.60|PF01266|PTHR13847|PTHR13847:SF20|SSF51905
puuC|puuC|AP_001926.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR015590|IPR016160|IPR016161|IPR016162|IPR016163	Aldehyde dehydrogenase domain|Aldehyde dehydrogenase, C-terminal|Aldehyde dehydrogenase, N-terminal|Aldehyde dehydrogenase, conserved site|Aldehyde/histidinol dehydrogenase	GO:0008152|GO:0016491|GO:0016620|GO:0055114	G3DSA:3.40.309.10|G3DSA:3.40.605.10|PF00171|PS00070|PS00687|PTHR11699|PTHR11699:SF46|SSF53720
puuD|puuD|AP_001924.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR011697|IPR017926	Glutamine amidotransferase|Peptidase C26	GO:0006541|GO:0016787	G3DSA:3.40.50.880|PF07722|PS51273|PTHR11922|PTHR11922:SF18|SSF52317
puuE|puuE|AP_001928.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004632|IPR005814|IPR015421|IPR015422|IPR015424	4-aminobutyrate aminotransferase, bacterial|Aminotransferase class-III|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2	GO:0003824|GO:0003867|GO:0008483|GO:0009448|GO:0030170	G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF00202|PIRSF000521|PS00600|PTHR11986|PTHR11986:SF17|SSF53383|TIGR00700
puuP|puuP|AP_001922.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002293|IPR004841	Amino acid permease domain|Amino acid/polyamine transporter I	GO:0003333|GO:0006810|GO:0015171|GO:0016020|GO:0055085	PF00324|PIRSF006060|PTHR11785|PTHR11785:SF55
puuR|puuR|AP_001925.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001387|IPR010982|IPR011051|IPR013096|IPR014710	Cupin 2, conserved barrel|Helix-turn-helix|Lambda repressor-like, DNA-binding domain|RmlC-like cupin domain|RmlC-like jelly roll fold	GO:0003677|GO:0043565	G3DSA:1.10.260.40|G3DSA:2.60.120.10|PF01381|PF07883|PS50943|SM00530|SSF47413|SSF51182
pykA|pykA|AP_002474.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001697|IPR011037|IPR015793|IPR015794|IPR015795|IPR015806|IPR015813|IPR018209	Pyruvate kinase|Pyruvate kinase, C-terminal|Pyruvate kinase, active site|Pyruvate kinase, alpha/beta|Pyruvate kinase, barrel|Pyruvate kinase, beta-barrel insert domain|Pyruvate kinase-like, insert domain|Pyruvate/Phosphoenolpyruvate kinase-like domain	GO:0000287|GO:0003824|GO:0004743|GO:0006096|GO:0030955	G3DSA:2.40.33.10|G3DSA:3.20.20.60|G3DSA:3.40.1380.20|PF00224|PF02887|PR01050|PS00110|PTHR11817|PTHR11817:SF0|SSF50800|SSF51621|SSF52935|TIGR01064
pykF|pykF|AP_002296.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001697|IPR011037|IPR015793|IPR015794|IPR015795|IPR015806|IPR015813|IPR018209	Pyruvate kinase|Pyruvate kinase, C-terminal|Pyruvate kinase, active site|Pyruvate kinase, alpha/beta|Pyruvate kinase, barrel|Pyruvate kinase, beta-barrel insert domain|Pyruvate kinase-like, insert domain|Pyruvate/Phosphoenolpyruvate kinase-like domain	GO:0000287|GO:0003824|GO:0004743|GO:0006096|GO:0030955	G3DSA:2.40.33.10|G3DSA:3.20.20.60|G3DSA:3.40.1380.20|PF00224|PF02887|PR01050|PS00110|PTHR11817|PTHR11817:SF0|SSF50800|SSF51621|SSF52935|TIGR01064
pyrB|pyrB|AP_004743.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002082|IPR006130|IPR006131|IPR006132	Aspartate carbamoyltransferase|Aspartate/ornithine carbamoyltransferase|Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain|Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding	GO:0004070|GO:0006207|GO:0006520|GO:0016597|GO:0016743	G3DSA:3.40.50.1370|MF_00001|PF00185|PF02729|PR00100|PR00101|PS00097|PTHR11405|PTHR11405:SF16|SSF53671|TIGR00670
pyrC|pyrC|AP_001688.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002195|IPR004721|IPR006680	Amidohydrolase 1|Dihydroorotase homodimeric type|Dihydroorotase, conserved site	GO:0004151|GO:0016787|GO:0016812|GO:0019856	G3DSA:3.20.20.140|MF_00219|PF01979|PIRSF001237|PS00482|PS00483|PTHR32531|PTHR32531:SF3|SSF51556|TIGR00856
pyrD|pyrD|AP_001575.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001295|IPR005719|IPR012135|IPR013785	Aldolase-type TIM barrel|Dihydroorotate dehydrogenase, class 1/ 2|Dihydroorotate dehydrogenase, class 2|Dihydroorotate dehydrogenase, conserved site	GO:0003824|GO:0004152|GO:0004158|GO:0006207|GO:0006222|GO:0016020|GO:0055114	G3DSA:3.20.20.70|MF_00225|PF01180|PIRSF000164|PS00911|PS00912|PTHR11938|PTHR11938:SF7|SSF51395|TIGR01036
pyrE|pyrE|AP_004149.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000836|IPR004467|IPR023031	Orotate phosphoribosyl transferase domain|Orotate phosphoribosyltransferase|Phosphoribosyltransferase domain	GO:0004588|GO:0006221|GO:0009116	G3DSA:3.40.50.2020|MF_01208|PF00156|PTHR19278|PTHR19278:SF9|SSF53271|TIGR00336
pyrF|pyrF|AP_001907.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001754|IPR011060|IPR013785|IPR014732|IPR018089	Aldolase-type TIM barrel|Orotidine 5'-phosphate decarboxylase|Orotidine 5'-phosphate decarboxylase domain|Orotidine 5'-phosphate decarboxylase, active site|Ribulose-phosphate binding barrel	GO:0003824|GO:0004590|GO:0006207|GO:0008152|GO:0044205	G3DSA:3.20.20.70|MF_01200_B|PF00215|PS00156|PTHR32119|SM00934|SSF51366|TIGR01740
pyrG|pyrG|AP_003346.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004468|IPR017456|IPR017926|IPR027417	CTP synthase|CTP synthase, N-terminal|Glutamine amidotransferase|P-loop containing nucleoside triphosphate hydrolase	GO:0003883|GO:0006221	G3DSA:3.40.50.300|G3DSA:3.40.50.880|MF_01227|PF00117|PF06418|PS51273|PTHR11550|PTHR11550:SF0|SSF52317|SSF52540|TIGR00337
pyrH|pyrH|AP_000831.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001048|IPR011817|IPR015963	Aspartate/glutamate/uridylate kinase|Uridylate kinase|Uridylate kinase, bacteria	GO:0005737|GO:0006221|GO:0008652|GO:0009041|GO:0033862	G3DSA:3.40.1160.10|MF_01220_B|PF00696|PIRSF005650|PTHR26059|PTHR26059:SF0|SSF53633|TIGR02075
pyrI|pyrI|AP_004742.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002801|IPR020542|IPR020545	Aspartate carbamoyltransferase regulatory subunit, C-terminal|Aspartate carbamoyltransferase regulatory subunit, N-terminal|Aspartate transcarbamylase regulatory subunit	GO:0006207|GO:0009347	G3DSA:2.30.30.20|G3DSA:3.30.70.140|MF_00002|PD006194|PF01948|PF02748|SSF54893|SSF57825|TIGR00240
pyrL|pyrL|AP_004744.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR012602	PyrBI operon leader peptide	GO:0019856	PF08052|PIRSF003249
qor|qor|AP_004552.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002085|IPR002364|IPR011032|IPR013149|IPR013154|IPR016040	Alcohol dehydrogenase GroES-like|Alcohol dehydrogenase superfamily, zinc-type|Alcohol dehydrogenase, C-terminal|GroES-like|NAD(P)-binding domain|Quinone oxidoreductase/zeta-crystallin, conserved site	GO:0008270|GO:0016491|GO:0055114	G3DSA:3.40.50.720|G3DSA:3.90.180.10|PF00107|PF08240|PS01162|PTHR11695|PTHR11695:SF31|SSF50129|SSF51735
qseB|qseB|AP_003575.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001789|IPR001867|IPR011006|IPR011991	CheY-like superfamily|Signal transduction response regulator, C-terminal|Signal transduction response regulator, receiver domain|Winged helix-turn-helix DNA-binding domain	GO:0000156|GO:0000160|GO:0003677|GO:0006355	G3DSA:1.10.10.10|G3DSA:3.40.50.2300|PF00072|PF00486|PS50110|PTHR26402|PTHR26402:SF117|SM00448|SM00862|SSF52172
qseC|qseC|AP_003576.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003594|IPR003661|IPR004358|IPR005467|IPR009082	Histidine kinase-like ATPase, ATP-binding domain|Signal transduction histidine kinase, core|Signal transduction histidine kinase, homodimeric domain|Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal	GO:0000155|GO:0004871|GO:0005524|GO:0007165|GO:0016020|GO:0016310|GO:0016772	G3DSA:1.10.287.130|G3DSA:1.20.5.1040|G3DSA:3.30.565.10|PF00512|PF02518|PR00344|PS50109|PTHR24423|SM00387|SM00388|SSF47384|SSF55874
queA|queA|AP_001055.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003699	Queuosine biosynthesis protein	GO:0008616|GO:0016740|GO:0016853	G3DSA:2.40.10.240|G3DSA:3.40.1780.10|MF_00113|PF02547|PTHR30307|PTHR30307:SF0|SSF111337|TIGR00113
racR|racR|AP_001985.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR010982	Lambda repressor-like, DNA-binding domain	GO:0003677	G3DSA:1.10.260.40
radA|radA|AP_004877.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003593|IPR004504|IPR014721|IPR020568|IPR027417	AAA+ ATPase domain|DNA repair protein RadA|P-loop containing nucleoside triphosphate hydrolase|Ribosomal protein S5 domain 2-type fold|Ribosomal protein S5 domain 2-type fold, subgroup	GO:0000166|GO:0003684|GO:0005524|GO:0006281|GO:0017111	G3DSA:3.30.230.10|G3DSA:3.40.50.300|PF13481|PF13541|PR01874|PTHR32472|SM00382|SSF52540|SSF54211|TIGR00416
rarA|rarA|AP_001640.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000073|IPR019913	Alpha/beta hydrolase fold-1|Pyrimidine utilisation protein RutD	GO:0006212|GO:0016811	G3DSA:3.40.50.1820|MF_00832|PF12697|PR00111|PTHR10992|PTHR10992:SF431|SSF53474|TIGR03611
rarD|rarD|AP_003981.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000620|IPR004626	Drug/metabolite transporter|RarD protein	GO:0005215|GO:0005887|GO:0006810|GO:0016020	PF00892|PTHR30357|SSF103481|TIGR00688
rbbA|rbbA|AP_004306.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000412|IPR003439|IPR003593|IPR017871|IPR027417	AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|ABC-2|P-loop containing nucleoside triphosphate hydrolase	GO:0000166|GO:0005524|GO:0006810|GO:0016020|GO:0016887|GO:0017111|GO:0042626	G3DSA:3.40.50.300|PF00005|PF12698|PS00211|PS50893|PS51012|PTHR24220|PTHR24220:SF136|SM00382|SSF52540
rbfA|rbfA|AP_003712.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000238|IPR015946|IPR020053|IPR023799	K homology domain-like, alpha/beta|Ribosome-binding factor A|Ribosome-binding factor A domain|Ribosome-binding factor A, conserved site	GO:0006364	G3DSA:3.30.300.20|MF_00003|PD007327|PF02033|PS01319|SSF89919|TIGR00082
rbn|rbn|AP_003922.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR017039|IPR023679	Uncharacterised protein family UPF0761, bacterial|Virulence factor BrkB		MF_00672|PF03631|PIRSF035875|PTHR30213|PTHR30213:SF0|TIGR00765
rbsA|rbsA|AP_004038.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003439|IPR003593|IPR015861|IPR017871|IPR027417	AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter, ribose import, RbsA|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase	GO:0000166|GO:0005524|GO:0008643|GO:0016020|GO:0016887|GO:0017111|GO:0043211	G3DSA:3.40.50.300|PF00005|PS00211|PS50893|PS51254|PTHR24220|PTHR24220:SF84|SM00382|SSF52540
rbsB|rbsB|AP_004036.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR025997	Periplasmic binding protein domain		G3DSA:3.40.50.2300|PF13407|PTHR32196|PTHR32196:SF9|SSF53822
rbsC|rbsC|AP_004037.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001851	ABC transporter, permease	GO:0005215|GO:0006810|GO:0016020	PF02653|PTHR32196|PTHR32196:SF0
rbsD|rbsD|AP_004039.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR007721|IPR023064|IPR023750	D-ribose pyranase|D-ribose pyranase RbsD-like|D-ribose pyranase RbsD/L-fucose mutarotase FucU	GO:0005996|GO:0016853|GO:0016872|GO:0048029	G3DSA:3.40.1650.10|MF_01661|PF05025|SSF102546
rbsK|rbsK|AP_004035.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002139|IPR002173|IPR011611|IPR011877	Carbohydrate kinase PfkB|Carbohydrate/puine kinase, PfkB, conserved site|Ribokinase|Ribokinase, bacterial	GO:0004747|GO:0006014|GO:0016773	G3DSA:3.40.1190.20|PF00294|PR00990|PS00584|PTHR10584|PTHR10584:SF94|SSF53613|TIGR02152
rbsR|rbsR|AP_004034.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000843|IPR010982	Lambda repressor-like, DNA-binding domain|Transcription regulator HTH, LacI	GO:0003677|GO:0003700|GO:0005622|GO:0006355	G3DSA:1.10.260.40|G3DSA:3.40.50.2300|PF00356|PF13377|PR00036|PS00356|PS50932|PTHR30146|PTHR30146:SF7|SM00354|SSF47413|SSF53822
rcsA|rcsA|AP_002563.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000792|IPR011991|IPR016032	Signal transduction response regulator, C-terminal effector|Transcription regulator LuxR, C-terminal|Winged helix-turn-helix DNA-binding domain	GO:0003677|GO:0003700|GO:0005622|GO:0006355|GO:0043565	G3DSA:1.10.10.10|PF00196|PR00038|PS00622|PS50043|SM00421|SSF46894
rcsB|rcsB|AP_002813.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000792|IPR001789|IPR011006|IPR011991|IPR016032	CheY-like superfamily|Signal transduction response regulator, C-terminal effector|Signal transduction response regulator, receiver domain|Transcription regulator LuxR, C-terminal|Winged helix-turn-helix DNA-binding domain	GO:0000156|GO:0000160|GO:0003677|GO:0003700|GO:0005622|GO:0006355|GO:0043565	G3DSA:1.10.10.10|G3DSA:3.40.50.2300|PF00072|PF00196|PR00038|PS00622|PS50043|PS50110|PTHR24761|PTHR24761:SF9|SM00421|SM00448|SSF46894|SSF52172
rcsC|rcsC|AP_002814.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001789|IPR011006	CheY-like superfamily|Signal transduction response regulator, receiver domain	GO:0000156|GO:0000160|GO:0006355	G3DSA:3.40.50.2300|PF00072|PS50110|PTHR24423|PTHR24423:SF339|SM00448|SSF52172
rcsC|rcsC|AP_002817.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000014|IPR003594|IPR003661|IPR004358|IPR005467|IPR009082|IPR011006|IPR019017	CheY-like superfamily|Histidine kinase-like ATPase, ATP-binding domain|PAS domain|Signal transduction histidine kinase RcsC, alpha-beta loop, C-terminal|Signal transduction histidine kinase, core|Signal transduction histidine kinase, homodimeric domain|Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal	GO:0000155|GO:0000160|GO:0004673|GO:0004871|GO:0005524|GO:0005886|GO:0006355|GO:0007165|GO:0016020|GO:0016021|GO:0016310|GO:0016772|GO:0018106	G3DSA:1.10.287.130|G3DSA:3.30.450.20|G3DSA:3.30.565.10|PF00512|PF02518|PF09456|PR00344|PS50109|PS51426|PTHR24423|PTHR24423:SF183|SM00091|SM00387|SM00388|SSF47384|SSF52172|SSF55874
rcsD|rcsD|AP_002812.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003594|IPR005467|IPR008207	Histidine kinase-like ATPase, ATP-binding domain|Signal transduction histidine kinase, core|Signal transduction histidine kinase, phosphotransfer (Hpt) domain	GO:0000160|GO:0004871|GO:0005524	G3DSA:1.20.120.160|G3DSA:3.30.565.10|PF01627|PF02518|PS50109|PS50894|SM00073|SM00387|SSF47226|SSF55874
rcsF|rcsF|AP_000857.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091				
rdgC|rdgC|AP_001044.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR007476	Putative exonuclease, RdgC	GO:0006310	MF_00194|PF04381
recA|recA|AP_003266.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003593|IPR013765|IPR020584|IPR020587|IPR020588|IPR023400|IPR027417	AAA+ ATPase domain|DNA recombination and repair protein RecA|DNA recombination and repair protein RecA, C-terminal|DNA recombination/repair protein RecA, conserved site|DNA recombination/repair protein RecA, monomer-monomer interface|DNA recombination/repair protein RecA/RadB, ATP-binding domain|P-loop containing nucleoside triphosphate hydrolase	GO:0000166|GO:0003677|GO:0003697|GO:0005524|GO:0006259|GO:0006281|GO:0008094|GO:0009432|GO:0017111	G3DSA:3.30.250.10|G3DSA:3.40.50.300|MF_00268|PF00154|PR00142|PS00321|PS50162|PS50163|PTHR22942|PTHR22942:SF1|SM00382|SSF52540|SSF54752|TIGR02012
recB|recB|AP_003383.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000212|IPR004586|IPR011335|IPR011604|IPR014016|IPR014017|IPR027417	DNA helicase, UvrD-like, C-terminal|DNA helicase, UvrD/REP type|Exodeoxyribonuclease V, beta subunit|Exonuclease, phage-type/RecB, C-terminal|P-loop containing nucleoside triphosphate hydrolase|Restriction endonuclease  type II-like|UvrD-like Helicase, ATP-binding domain	GO:0003677|GO:0004003|GO:0004518|GO:0005524|GO:0006281|GO:0008854|GO:0016787	G3DSA:1.10.3170.10|G3DSA:1.10.486.10|G3DSA:3.40.50.300|G3DSA:3.90.320.10|PF00580|PF12705|PF13361|PTHR11070|SSF52540|SSF52980|TIGR00609
recC|recC|AP_003385.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR006697|IPR011335|IPR013986|IPR027417	DExx box DNA helicase domain|Exodeoxyribonuclease V, gamma subunit|P-loop containing nucleoside triphosphate hydrolase|Restriction endonuclease  type II-like	GO:0008854|GO:0009338	G3DSA:1.10.10.160|G3DSA:3.40.50.300|PF04257|PIRSF000980|PTHR30591|SSF52540|SSF52980|TIGR01450
recD|recD|AP_003382.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003593|IPR006344|IPR027417	AAA+ ATPase domain|Exodeoxyribonuclease V, alpha subunit|P-loop containing nucleoside triphosphate hydrolase	GO:0000166|GO:0008854|GO:0009338|GO:0017111	G3DSA:3.40.50.300|PF13538|PF13604|PTHR10887|SM00382|SSF52540|TIGR01447
recE|recE|AP_001978.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR010584|IPR024432	Enterobacterial exodeoxyribonuclease VIII|Putative exodeoxyribonuclease 8, PDDEXK-like domain		PF06630|PF12684
recF|recF|AP_004093.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001238|IPR003395|IPR018078|IPR027417	DNA-binding, RecF|DNA-binding, RecF, conserved site|P-loop containing nucleoside triphosphate hydrolase|RecF/RecN/SMC	GO:0003697|GO:0005524|GO:0006281	G3DSA:3.40.50.300|MF_00365|PF02463|PS00617|PS00618|PTHR32182|PTHR32182:SF6|SSF52540|TIGR00611
recG|recG|AP_004140.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001650|IPR004365|IPR004609|IPR011545|IPR012340|IPR014001|IPR027417	ATP-dependent DNA helicase RecG|DNA/RNA helicase, DEAD/DEAH box type, N-terminal|Helicase, C-terminal|Helicase, superfamily 1/2, ATP-binding domain|Nucleic acid binding, OB-fold, tRNA/helicase-type|Nucleic acid-binding, OB-fold|P-loop containing nucleoside triphosphate hydrolase	GO:0003676|GO:0004003|GO:0004386|GO:0005524|GO:0006281|GO:0006310|GO:0008026	G3DSA:2.40.50.140|G3DSA:3.40.50.300|PF00270|PF00271|PF01336|PTHR24031|PTHR24031:SF50|SM00487|SM00490|SSF50249|SSF52540|TIGR00643
recJ|recJ|AP_003451.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001667|IPR003156|IPR004610	Bacterial RecJ exonuclease|Phosphoesterase, DHHA1|Phosphoesterase, RecJ-like	GO:0003676|GO:0006281|GO:0006310|GO:0008409|GO:0016787|GO:0030145	PF01368|PF02272|PTHR30255|PTHR30255:SF0|SSF64182|TIGR00644
recN|recN|AP_003196.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003395|IPR004604|IPR027417	DNA recombination/repair protein RecN|P-loop containing nucleoside triphosphate hydrolase|RecF/RecN/SMC	GO:0005524|GO:0006281|GO:0006310	G3DSA:3.40.50.300|PF02463|PIRSF003128|PTHR11059|SSF52540|TIGR00634
recO|recO|AP_003151.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003717|IPR012340|IPR022572	DNA replication/recombination mediator RecO, N-terminal|Nucleic acid-binding, OB-fold|Recombination protein O, RecO	GO:0006281|GO:0006310	G3DSA:2.40.50.140|MF_00201|PF02565|PF11967|SSF50249|SSF57863|TIGR00613
recQ|recQ|AP_003978.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001650|IPR002121|IPR004589|IPR006293|IPR010997|IPR011545|IPR011991|IPR014001|IPR018982|IPR027417	DNA helicase, ATP-dependent, RecQ type|DNA helicase, ATP-dependent, RecQ type, bacterial|DNA/RNA helicase, DEAD/DEAH box type, N-terminal|HRDC domain|HRDC-like|Helicase, C-terminal|Helicase, superfamily 1/2, ATP-binding domain|P-loop containing nucleoside triphosphate hydrolase|RQC domain|Winged helix-turn-helix DNA-binding domain	GO:0000166|GO:0003676|GO:0003824|GO:0004003|GO:0004386|GO:0005524|GO:0005622|GO:0006260|GO:0006281|GO:0006310|GO:0008026|GO:0009432|GO:0043140|GO:0044237	G3DSA:1.10.10.10|G3DSA:1.10.150.80|G3DSA:3.40.50.300|PF00270|PF00271|PF00570|PF09382|PS50967|PS51192|PS51194|PTHR13710|PTHR13710:SF11|SM00341|SM00487|SM00490|SM00956|SSF47819|SSF52540|TIGR00614|TIGR01389
recR|recR|AP_001121.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000093|IPR003583|IPR006171|IPR015967|IPR023627|IPR023628	DNA recombination protein RecR|Helix-hairpin-helix DNA-binding motif, class 1|Recombination protein RecR|Recombination protein RecR, C4-type zinc finger|Recombination protein RecR, conserved site|Toprim domain	GO:0003677|GO:0006281|GO:0006310	MF_00017|PF01751|PF02132|PS01300|PTHR30446|PTHR30446:SF0|SM00278|SM00493|SSF111304|TIGR00615
recT|recT|AP_001977.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004590|IPR018330	DNA single-strand annealing protein RecT|DNA single-strand annealing protein RecT-like	GO:0003677|GO:0006259	PF03837|TIGR00616
recX|recX|AP_003265.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003783|IPR011991	Regulatory protein RecX|Winged helix-turn-helix DNA-binding domain	GO:0006282	G3DSA:1.10.10.10|MF_01114|PF02631
relA|relA|AP_003350.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002912|IPR004095|IPR004811|IPR007685|IPR012675|IPR012676|IPR026020	(p)ppGpp synthetase|ACT domain|Beta-grasp domain|RelA/SpoT|RelA/SpoT family|TGS|TGS-like	GO:0008152|GO:0015969|GO:0016597	G3DSA:3.10.20.30|G3DSA:3.30.460.10|G3DSA:3.30.70.260|PF01842|PF02824|PF04607|PF13328|PTHR21262|SM00954|SSF109604|SSF55021|SSF81271|SSF81301|TIGR00691
relB|relB|AP_002186.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR007337	RelB antitoxin/Antitoxin DinJ		PF04221|TIGR02384
relE|relE|AP_002185.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR007712	Toxin-antitoxin system, RelE/ParE toxin family		PF05016|SSF143011|TIGR02385
rem|rem|AP_002183.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR016418	Uncharacterised conserved protein UCP004509, Rem		PIRSF004509
rep|rep|AP_004019.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000212|IPR005752|IPR013986|IPR014016|IPR014017|IPR027417	DExx box DNA helicase domain|DNA helicase, ATP-dependent, RepA type|DNA helicase, UvrD-like, C-terminal|DNA helicase, UvrD/REP type|P-loop containing nucleoside triphosphate hydrolase|UvrD-like Helicase, ATP-binding domain	GO:0003677|GO:0004003|GO:0005524|GO:0005737|GO:0006268|GO:0016787	G3DSA:1.10.10.160|G3DSA:1.10.486.10|G3DSA:3.40.50.300|PF00580|PF13361|PS51198|PS51217|PTHR11070|SSF52540|TIGR01074
rfaB|rfaB|AP_004163.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001296	Glycosyl transferase, family 1	GO:0009058	G3DSA:3.40.50.2000|PF00534|PF13439|PTHR12526|PTHR12526:SF91|SSF53756
rfaC|rfaC|AP_004170.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002201|IPR011908	Glycosyl transferase, family 9|Lipopolysaccharide heptosyltransferase I	GO:0008152|GO:0008920|GO:0009103|GO:0016757	G3DSA:3.40.50.2000|PF01075|SSF53756|TIGR02193
rfaD|rfaD|AP_004172.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001509|IPR011912|IPR016040	ADP-L-glycero-D-manno-heptose-6-epimerase|NAD(P)-binding domain|NAD-dependent epimerase/dehydratase	GO:0003824|GO:0005975|GO:0008712|GO:0044237|GO:0050661|GO:0050662	G3DSA:3.40.50.720|G3DSA:3.90.25.10|MF_01601|PF01370|PTHR10366|PTHR10366:SF29|SSF51735|TIGR02197
rfaE|rfaE|AP_003602.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002173|IPR004821|IPR011611|IPR011913|IPR011914|IPR014729|IPR023030	Bifunctional protein HldE|Carbohydrate kinase PfkB|Carbohydrate/puine kinase, PfkB, conserved site|Cytidyltransferase-like domain|RfaE bifunctional protein, domain I|RfaE bifunctional protein, domain II|Rossmann-like alpha/beta/alpha sandwich fold	GO:0003824|GO:0005975|GO:0009058|GO:0016773|GO:0016779	G3DSA:3.40.1190.20|G3DSA:3.40.50.620|MF_01603|PF00294|PF01467|PS00583|PTHR10584|PTHR10584:SF96|SSF52374|SSF53613|TIGR00125|TIGR02198|TIGR02199
rfaF|rfaF|AP_004171.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002201|IPR011910	Glycosyl transferase, family 9|Lipopolysaccharide heptosyltransferase II	GO:0008152|GO:0009103|GO:0016757	G3DSA:3.40.50.2000|PF01075|PTHR30160|PTHR30160:SF1|SSF53756|TIGR02195
rfaG|rfaG|AP_004160.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001296	Glycosyl transferase, family 1	GO:0009058	G3DSA:3.40.50.2000|PF00534|PTHR12526|PTHR12526:SF11|SSF53756
rfaH|rfaH|AP_003960.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR005824|IPR006645|IPR010215	KOW|Transcription activator RfaH|Transcription antitermination protein, NusG, N-terminal	GO:0006355|GO:0032968	G3DSA:3.30.70.940|PF02357|SM00738|SM00739|SSF82679|TIGR01955
rfaI|rfaI|AP_004164.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002495|IPR013645	Glycosyl transferase, family 8|Glycosyl transferase, family 8, C-terminal	GO:0008918|GO:0009103|GO:0016757	G3DSA:3.90.550.10|PF01501|PF08437|PTHR13778|PTHR13778:SF1|SSF53448
rfaJ|rfaJ|AP_004165.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002495|IPR013645	Glycosyl transferase, family 8|Glycosyl transferase, family 8, C-terminal	GO:0008918|GO:0009103|GO:0016757	G3DSA:3.90.550.10|PF01501|PF08437|PTHR13778|PTHR13778:SF1|SSF53448
rfaK|rfaK|AP_004168.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002201	Glycosyl transferase, family 9	GO:0008152|GO:0016757	G3DSA:3.40.50.2000|PF01075|SSF53756
rfaL|rfaL|AP_004169.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091				PF13425
rfaP|rfaP|AP_004161.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR010440|IPR011009|IPR017172	Lipopolysaccharide core heptose(I) kinase rfaP|Lipopolysaccharide kinase|Protein kinase-like domain	GO:0005524|GO:0009103|GO:0016020|GO:0016301|GO:0016772|GO:0016773	PF06293|PIRSF037318|SSF56112
rfaQ|rfaQ|AP_004159.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002201|IPR011916	Glycosyl transferase, family 9|Lipopolysaccharide heptosyltransferase III, putative	GO:0008152|GO:0016757	G3DSA:3.40.50.2000|PF01075|PTHR30160|PTHR30160:SF1|SSF53756|TIGR02201
rfaY|rfaY|AP_004166.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR009330|IPR011009	Lipopolysaccharide core heptose(II) kinase|Protein kinase-like domain	GO:0009244|GO:0016772	PF06176|SSF56112
rfaZ|rfaZ|AP_004167.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091				G3DSA:3.90.1480.10|PD024016
rfbA|rfbA|AP_002639.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR005835|IPR005907	Glucose-1-phosphate thymidylyltransferase, short form|Nucleotidyl transferase	GO:0008879|GO:0009058|GO:0016779|GO:0045226	G3DSA:3.90.550.10|PF00483|PTHR22572|PTHR22572:SF13|SSF53448|TIGR01207
rfbB|rfbB|AP_002641.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001509|IPR005888|IPR016040	NAD(P)-binding domain|NAD-dependent epimerase/dehydratase|dTDP-glucose 4,6-dehydratase	GO:0003824|GO:0008460|GO:0009225|GO:0044237|GO:0050662	G3DSA:3.40.50.720|G3DSA:3.90.25.10|PF01370|PTHR10366|PTHR10366:SF41|SSF51735|TIGR01181
rfbC|rfbC|AP_002638.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000888|IPR011051|IPR014710	RmlC-like cupin domain|RmlC-like jelly roll fold|dTDP-4-dehydrorhamnose 3,5-epimerase-related	GO:0008830|GO:0009103	G3DSA:2.60.120.10|PD001462|PF00908|PTHR21047|PTHR21047:SF0|SSF51182|TIGR01221
rfbD|rfbD|AP_002640.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR005913|IPR016040	NAD(P)-binding domain|dTDP-4-dehydrorhamnose reductase	GO:0008831|GO:0045226	G3DSA:3.40.50.720|G3DSA:3.90.25.10|PF04321|PTHR10491|PTHR10491:SF0|SSF51735|TIGR01214
rfbX|rfbX|AP_002637.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002797	Polysaccharide biosynthesis protein	GO:0000271|GO:0016020	PF01943
rfe|rfe|AP_004013.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000715|IPR012750	Glycosyl transferase, family 4|Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase	GO:0000287|GO:0008963|GO:0009103|GO:0009276|GO:0016021|GO:0016780|GO:0030145	PF00953|PTHR22926|PTHR22926:SF2|TIGR02380
rffA|rffA|AP_004006.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000653|IPR012749|IPR015421|IPR015422|IPR015424	DegT/DnrJ/EryC1/StrS aminotransferase|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2|TDP-4-keto-6-deoxy-D-glucose transaminase	GO:0003824|GO:0030170	G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF01041|PIRSF000390|PTHR11751|PTHR11751:SF119|SSF53383|TIGR02379
rffC|rffC|AP_004007.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000182|IPR002110|IPR012752|IPR016181|IPR020683	Acyl-CoA N-acyltransferase|Ankyrin repeat|Ankyrin repeat-containing domain|GNAT domain|TDP-D-fucosamine acetyltransferase WecD	GO:0005515|GO:0008080|GO:0009246	G3DSA:3.40.630.30|PF13673|PS50088|PS50297|PS51186|SSF55729|TIGR02382
rffD|rffD|AP_004010.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001732|IPR008927|IPR014026|IPR014027|IPR016040|IPR017476	6-phosphogluconate dehydrogenase, C-terminal-like|NAD(P)-binding domain|Nucleotide sugar dehydrogenase|UDP-glucose/GDP-mannose dehydrogenase, C-terminal|UDP-glucose/GDP-mannose dehydrogenase, N-terminal|UDP-glucose/GDP-mannose dehydrogenase, dimerisation	GO:0016616|GO:0051287|GO:0055114	G3DSA:3.40.50.720|PF00984|PF03720|PF03721|PIRSF000124|PTHR11374|PTHR11374:SF4|SM00984|SSF48179|SSF51735|SSF52413|TIGR03026
rffE|rffE|AP_004011.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003331	UDP-N-acetylglucosamine 2-epimerase	GO:0006047|GO:0008761|GO:0009103	G3DSA:3.40.50.2000|PF02350|PTHR18964|PTHR18964:SF2|SSF53756|TIGR00236
rffG|rffG|AP_004009.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001509|IPR005888|IPR016040	NAD(P)-binding domain|NAD-dependent epimerase/dehydratase|dTDP-glucose 4,6-dehydratase	GO:0003824|GO:0008460|GO:0009225|GO:0044237|GO:0050662	G3DSA:3.40.50.720|G3DSA:3.90.25.10|PF01370|PTHR10366|PTHR10366:SF41|SSF51735|TIGR01181
rffH|rffH|AP_004008.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR005835|IPR005907	Glucose-1-phosphate thymidylyltransferase, short form|Nucleotidyl transferase	GO:0008879|GO:0009058|GO:0016779|GO:0045226	G3DSA:3.90.550.10|PF00483|PTHR22572|PTHR22572:SF13|SSF53448|TIGR01207
rffM|rffM|AP_004002.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004629|IPR023085	Glycosyl transferase WecB/TagA/CpsF|UDP-N-acetyl-D-mannosaminuronic acid transferase, bacteria	GO:0009058|GO:0009246|GO:0016758	MF_01001|PF03808|TIGR00696
rffT|rffT|AP_004004.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR009993	4-alpha-L-fucosyltransferase	GO:0008417|GO:0009246|GO:0009276	MF_01002|PF07429
rhaA|rhaA|AP_003905.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR009308|IPR013022	Rhamnose isomerase|Xylose isomerase-like, TIM barrel domain	GO:0008740|GO:0019299|GO:0030145	G3DSA:3.20.20.150|MF_00541|PD042532|PF06134|PTHR30268|SSF51658|TIGR01748
rhaB|rhaB|AP_003904.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR013449|IPR018484|IPR018485	Carbohydrate kinase, FGGY, C-terminal|Carbohydrate kinase, FGGY, N-terminal|Rhamnulokinase	GO:0005975|GO:0008993|GO:0016773|GO:0019301	G3DSA:3.30.420.40|MF_01535|PF00370|PF02782|PTHR10196|PTHR10196:SF6|SSF53067|TIGR02627
rhaD|rhaD|AP_003906.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001303|IPR013447	Class II aldolase/adducin N-terminal|Rhamnulose-1-phosphate aldolase	GO:0008994|GO:0019301|GO:0046872	G3DSA:3.40.225.10|PF00596|PTHR22789|SM01007|SSF53639|TIGR02624
rhaR|rhaR|AP_003902.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003313|IPR009057|IPR011051|IPR018060|IPR018062|IPR020449|IPR023699	DNA binding HTH domain, AraC-type|HTH domain AraC-type, conserved site|Homeodomain-like|RmlC-like cupin domain|Transcription activator HTH, RhaR|Transcription regulator HTH, AraC, arabinose-binding/dimerisation|Transcription regulator HTH, AraC- type	GO:0003677|GO:0003700|GO:0005622|GO:0005737|GO:0006355|GO:0019299|GO:0043565|GO:0045893	G3DSA:1.10.10.60|G3DSA:2.60.120.280|MF_01533|PF02311|PF12833|PR00032|PS00041|PS01124|PTHR11019|PTHR11019:SF21|SM00342|SSF46689|SSF51182
rhaS|rhaS|AP_003903.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003313|IPR009057|IPR014710|IPR018060|IPR018062|IPR020449|IPR023609	DNA binding HTH domain, AraC-type|HTH domain AraC-type, conserved site|Homeodomain-like|RmlC-like jelly roll fold|Transcription regulator HTH, AraC, arabinose-binding/dimerisation|Transcription regulator HTH, AraC- type|Transcription regulator HTH, RhaS	GO:0003677|GO:0003700|GO:0005622|GO:0006355|GO:0019299|GO:0043565	G3DSA:1.10.10.60|G3DSA:2.60.120.10|MF_01534|PF00165|PF02311|PR00032|PS00041|PS01124|PTHR11019|PTHR11019:SF21|SM00342|SSF46689|SSF51215
rhaT|rhaT|AP_003901.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004673	L-rhamnose-proton symport, RhaT	GO:0008645|GO:0015153|GO:0016021	MF_01532|PF06379|PTHR30364|PTHR30364:SF0|TIGR00776
rhlB|rhlB|AP_004017.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000629|IPR001650|IPR011545|IPR014001|IPR014014|IPR023554|IPR027417	DNA/RNA helicase, DEAD/DEAH box type, N-terminal|Helicase, C-terminal|Helicase, superfamily 1/2, ATP-binding domain|P-loop containing nucleoside triphosphate hydrolase|RNA helicase, ATP-dependent, DEAD-box, conserved site|RNA helicase, ATP-dependent, RhlB-type|RNA helicase, DEAD-box type, Q motif	GO:0003676|GO:0004004|GO:0004386|GO:0005524|GO:0008026	G3DSA:3.40.50.300|MF_00661|PF00270|PF00271|PS00039|PS51192|PS51194|PS51195|PTHR24031|PTHR24031:SF0|SM00487|SM00490|SSF52540
rhlE|rhlE|AP_001428.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000629|IPR001650|IPR011545|IPR014001|IPR014014|IPR027417	DNA/RNA helicase, DEAD/DEAH box type, N-terminal|Helicase, C-terminal|Helicase, superfamily 1/2, ATP-binding domain|P-loop containing nucleoside triphosphate hydrolase|RNA helicase, ATP-dependent, DEAD-box, conserved site|RNA helicase, DEAD-box type, Q motif	GO:0003676|GO:0004386|GO:0005524|GO:0008026	G3DSA:3.40.50.300|PF00270|PF00271|PS00039|PS51192|PS51194|PS51195|PTHR24031|PTHR24031:SF0|SM00487|SM00490|SSF52540
rho|rho|AP_004014.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000194|IPR003593|IPR004665|IPR011112|IPR011113|IPR011129|IPR012340|IPR027417	AAA+ ATPase domain|ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain|Cold shock protein|Nucleic acid-binding, OB-fold|P-loop containing nucleoside triphosphate hydrolase|Rho termination factor, N-terminal|Rho termination factor, RNA-binding|Transcription termination factor Rho	GO:0000166|GO:0003676|GO:0003723|GO:0005524|GO:0006353|GO:0008186|GO:0017111	G3DSA:1.10.720.10|G3DSA:2.40.50.140|G3DSA:3.40.50.300|MF_01884|PF00006|PF07497|PF07498|PTHR15184|PTHR15184:SF2|SM00357|SM00382|SM00959|SSF50249|SSF52540|SSF68912|TIGR00767
rhsA|rhsA|AP_004199.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001826|IPR006530|IPR022385	RHS protein|Rhs repeat-associated core|YD repeat		PF03527|PF05593|PR00394|PTHR32305|PTHR32305:SF3|TIGR01643|TIGR03696
rhsB|rhsB|AP_004310.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001826|IPR006530|IPR022385|IPR025479	Domain of unknown function DUF4329|RHS protein|Rhs repeat-associated core|YD repeat		PF03527|PF05593|PF14220|PR00394|PTHR32305|PTHR32305:SF3|TIGR01643|TIGR03696
rhsC|rhsC|AP_001339.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001826|IPR006530|IPR022385	RHS protein|Rhs repeat-associated core|YD repeat		PF03527|PF05593|PR00394|PTHR32305|PTHR32305:SF5|TIGR01643|TIGR03696
rhsD|rhsD|AP_001146.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001826|IPR006530|IPR022385|IPR025479	Domain of unknown function DUF4329|RHS protein|Rhs repeat-associated core|YD repeat		PF03527|PF05593|PF14220|PR00394|PTHR32305|PTHR32305:SF3|TIGR01643|TIGR03696
rhsE|rhsE|AP_002079.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001826|IPR006530|IPR022385	RHS protein|Rhs repeat-associated core|YD repeat		PF03527|PF05593|PR00394|PTHR32305|PTHR32305:SF6|TIGR03696
rhtA|rhtA|AP_001444.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000620	Drug/metabolite transporter	GO:0016020	PF00892|PTHR30375|SSF103481
rhtB|rhtB|AP_003976.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001123|IPR004778	Homoserine/Threonine efflux protein|Lysine-type exporter protein (LYSE/YGGA)	GO:0006865|GO:0016020|GO:0016021	PF01810|PIRSF006324|TIGR00949
rhtC|rhtC|AP_003977.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001123|IPR004778	Homoserine/Threonine efflux protein|Lysine-type exporter protein (LYSE/YGGA)	GO:0006865|GO:0016020|GO:0016021	PF01810|PIRSF006324|TIGR00949
ribA|ribA|AP_001903.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000926	GTP cyclohydrolase II, RibA	GO:0003935|GO:0009231	MF_00179|PF00925|PTHR21327|SSF142695|TIGR00505
ribB|ribB|AP_003591.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000422|IPR017945	3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB|DHBP synthase RibB-like alpha/beta domain	GO:0008686|GO:0009231	G3DSA:3.90.870.10|MF_00180|PF00926|PTHR21327|SSF55821|TIGR00506
ribC|ribC|AP_002284.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001783|IPR017938|IPR023366|IPR026017	ATPase, F1/A1 complex, alpha subunit, N-terminal|Lumazine-binding domain|Lumazine-binding protein|Riboflavin synthase-like beta-barrel	GO:0004746|GO:0009231|GO:0016491|GO:0055114	G3DSA:2.40.30.20|PF00677|PIRSF000498|PS51177|PTHR21098|SSF63380|TIGR00187
ribD|ribD|AP_001064.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002125|IPR002734|IPR004794|IPR011549|IPR016192|IPR016193|IPR024072	APOBEC/CMP deaminase, zinc-binding|Bacterial bifunctional deaminase-reductase, C-terminal|CMP/dCMP deaminase, zinc-binding|Cytidine deaminase-like|Dihydrofolate reductase-like domain|Riboflavin biosynthesis protein RibD|Riboflavin-specific deaminase, C-terminal	GO:0003824|GO:0008270|GO:0008703|GO:0008835|GO:0009231|GO:0016787|GO:0050661|GO:0055114	G3DSA:3.40.140.10|G3DSA:3.40.430.10|PF00383|PF01872|PIRSF006769|PS00903|PTHR11079|SSF53597|SSF53927|TIGR00227|TIGR00326
ribE|ribE|AP_001065.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002180	6,7-dimethyl-8-ribityllumazine synthase	GO:0009231|GO:0009349	G3DSA:3.40.50.960|MF_00178|PF00885|PTHR21058|SSF52121|TIGR00114
ribF|ribF|AP_000689.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002606|IPR014729|IPR015864|IPR015865|IPR023465|IPR023468	FAD synthetase|Riboflavin kinase|Riboflavin kinase domain|Riboflavin kinase domain, bacterial/eukaryotic|Riboflavin kinase, bacterial|Rossmann-like alpha/beta/alpha sandwich fold	GO:0003919|GO:0008531|GO:0009231	G3DSA:2.40.30.30|G3DSA:3.40.50.620|PF01687|PF06574|PIRSF004491|PTHR22749|SM00904|SSF52374|SSF82114|TIGR00083
rihA|rihA|AP_001300.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001910|IPR015910|IPR022975|IPR023186	Inosine/uridine-preferring nucleoside hydrolase|Inosine/uridine-preferring nucleoside hydrolase domain|Inosine/uridine-preferring nucleoside hydrolase, conserved site|Pyrimidine-specific ribonucleoside hydrolase RihA	GO:0005737|GO:0006206|GO:0008152|GO:0015949|GO:0016787|GO:0016798|GO:0016799|GO:0045437	G3DSA:3.90.245.10|MF_01431|PF01156|PS01247|PTHR12304|SSF53590
rihB|rihB|AP_002759.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001910|IPR015910|IPR022977|IPR023186	Inosine/uridine-preferring nucleoside hydrolase|Inosine/uridine-preferring nucleoside hydrolase domain|Inosine/uridine-preferring nucleoside hydrolase, conserved site|Pyrimidine-specific ribonucleoside hydrolase RihB	GO:0016799|GO:0046133|GO:0050263	G3DSA:3.90.245.10|MF_01433|PF01156|PS01247|PTHR12304|SSF53590
rihC|rihC|AP_000694.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001910|IPR015910|IPR022976|IPR023186	Inosine/uridine-preferring nucleoside hydrolase|Inosine/uridine-preferring nucleoside hydrolase domain|Inosine/uridine-preferring nucleoside hydrolase, conserved site|Non-specific ribonucleoside hydrolase RihC	GO:0016798|GO:0016799	G3DSA:3.90.245.10|MF_01432|PF01156|PS01247|PTHR12304|SSF53590
rimI|rimI|AP_004860.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000182|IPR006464|IPR016181	Acyl-CoA N-acyltransferase|GNAT domain|Ribosomal-protein-alanine acetyltransferase	GO:0006474|GO:0008080|GO:0016407	G3DSA:3.40.630.30|PF00583|PS51186|PTHR23091|PTHR23091:SF1|SSF55729|TIGR01575
rimJ|rimJ|AP_001692.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000182|IPR016181	Acyl-CoA N-acyltransferase|GNAT domain	GO:0008080	G3DSA:3.40.630.30|PF00583|PS51186|SSF55729
rimK|rimK|AP_001483.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004666|IPR011761|IPR013651|IPR013815|IPR013816|IPR016185|IPR023533	ATP-grasp fold|ATP-grasp fold, RimK-type|ATP-grasp fold, subdomain 1|ATP-grasp fold, subdomain 2|Pre-ATP-grasp domain|Ribosomal S6 modification enzyme RimK|Ribosomal S6 modification enzyme RimK/Lysine biosynthesis enzyme LysX	GO:0003824|GO:0005524|GO:0006464|GO:0046872	G3DSA:3.30.1490.20|G3DSA:3.30.470.20|G3DSA:3.40.50.20|MF_01552|PF08443|PS50975|PTHR21621|PTHR21621:SF0|SSF56059|TIGR00768
rimL|rimL|AP_002050.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000182|IPR016181	Acyl-CoA N-acyltransferase|GNAT domain	GO:0008080	G3DSA:3.40.630.30|PF00583|PS51186|SSF55729
rimM|rimM|AP_003189.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002676|IPR009000|IPR011033|IPR011961|IPR027275	16S rRNA processing protein RimM|PRC-barrel domain|PRC-barrel-like|RimM protein|Translation elongation/initiation factor/Ribosomal, beta-barrel	GO:0005840|GO:0006364|GO:0043022	G3DSA:2.30.30.240|G3DSA:2.40.30.60|MF_00014|PF01782|PF05239|SSF50346|SSF50447|TIGR02273
rlmB|rlmB|AP_004680.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001537|IPR004441|IPR013123|IPR024915	23S rRNA (guanosine-2-O-)-methyltransferase RlmB|RNA 2-O ribose methyltransferase, substrate binding|RNA methyltransferase TrmH family|tRNA/rRNA methyltransferase, SpoU	GO:0003723|GO:0006396|GO:0008168|GO:0008173	G3DSA:3.30.1330.30|G3DSA:3.40.1280.10|MF_01887|PF00588|PF08032|PTHR12029|SM00967|SSF55315|SSF75217|TIGR00186
rlpA|rlpA|AP_001282.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR007730|IPR009009|IPR012997	Barwin-related endoglucanase|Rare lipoprotein A, bacterial|Sporulation-related domain		G3DSA:3.30.70.1070|PF03330|PF05036|PS51257|SSF110997|SSF50685|TIGR00413
rlpB|rlpB|AP_001290.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR007485	Lipopolysaccharide assembly, LptE	GO:0019867|GO:0043165	G3DSA:3.30.160.150|MF_01186|PF04390|PS51257
rluA|rluA|AP_000722.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR006145|IPR006225|IPR020103	Pseudouridine synthase, RluC/RluD|Pseudouridine synthase, RsuA/RluB/C/D/E/F|Pseudouridine synthase, catalytic domain	GO:0001522|GO:0003723|GO:0009451|GO:0009982	PF00849|PTHR10436|PTHR10436:SF39|SSF55120|TIGR00005
rluB|rluB|AP_001895.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000748|IPR002942|IPR006145|IPR018496|IPR020103	Pseudouridine synthase, RsuA/RluB/C/D/E/F|Pseudouridine synthase, RsuA/RluB/E/F|Pseudouridine synthase, RsuA/RluB/E/F, conserved site|Pseudouridine synthase, catalytic domain|RNA-binding S4 domain	GO:0001522|GO:0003723|GO:0009451|GO:0009982|GO:0016866	G3DSA:3.10.290.10|PF00849|PF01479|PS01149|PS50889|PTHR21600|PTHR21600:SF2|SM00363|SSF55120|SSF55174|TIGR00093
rluC|rluC|AP_001712.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002942|IPR006145|IPR006224|IPR006225|IPR020103	Pseudouridine synthase, RluC/RluD|Pseudouridine synthase, RluC/RluD, conserved site|Pseudouridine synthase, RsuA/RluB/C/D/E/F|Pseudouridine synthase, catalytic domain|RNA-binding S4 domain	GO:0001522|GO:0003723|GO:0009451|GO:0009982	G3DSA:3.10.290.10|PF00849|PF01479|PS01129|PS50889|PTHR10436|PTHR10436:SF55|SM00363|SSF55120|SSF55174|TIGR00005
rluD|rluD|AP_003176.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002942|IPR006145|IPR006225|IPR020103	Pseudouridine synthase, RluC/RluD|Pseudouridine synthase, RsuA/RluB/C/D/E/F|Pseudouridine synthase, catalytic domain|RNA-binding S4 domain	GO:0001522|GO:0003723|GO:0009451|GO:0009982	G3DSA:3.10.290.10|PF00849|PF01479|PTHR10436|PTHR10436:SF39|SM00363|SSF55120|SSF55174|TIGR00005
rmf|rmf|AP_001583.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR007040|IPR023200	Ribosome modulation factor|Ribosome modulation factor-like domain		G3DSA:1.10.10.620|MF_00919|PD051650|PF04957
rmuC|rmuC|AP_003968.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003798	DNA recombination RmuC		PF02646|PTHR30563
rna|rna|AP_001258.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001568|IPR018188	Ribonuclease T2, active site|Ribonuclease T2-like	GO:0003723|GO:0033897	G3DSA:3.90.730.10|PF00445|PS00530|PS00531|PTHR11240|PTHR11240:SF17|SSF55895
rnb|rnb|AP_001912.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001900|IPR003029|IPR004476|IPR011129|IPR011804|IPR012340|IPR013223|IPR022966|IPR022967	Cold shock protein|Nucleic acid-binding, OB-fold|RNA-binding domain, S1|Ribonuclease B, N-terminal OB domain|Ribonuclease II|Ribonuclease II/R|Ribonuclease II/R, conserved site|Ribonuclease II/ribonuclease R|Ribosomal protein S1, RNA-binding domain	GO:0003676|GO:0003723|GO:0004540|GO:0006401|GO:0008859|GO:0016070	MF_01036|PF00575|PF00773|PF08206|PS01175|PTHR23355|PTHR23355:SF6|SM00316|SM00357|SM00955|SSF50249|TIGR00358|TIGR02062
rnc|rnc|AP_003153.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000999|IPR001159|IPR011907|IPR014720	Double-stranded RNA-binding|Double-stranded RNA-binding-like domain|Ribonuclease III|Ribonuclease III domain	GO:0003723|GO:0003725|GO:0004525|GO:0006396|GO:0016075	G3DSA:1.10.1520.10|G3DSA:3.30.160.20|MF_00104|PF00035|PF00636|PS00517|PS50137|PS50142|PTHR11207|SM00358|SM00535|SSF54768|SSF69065|TIGR02191
rnd|rnd|AP_002423.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002121|IPR002562|IPR006292|IPR010997|IPR012337	3'-5' exonuclease domain|HRDC domain|HRDC-like|Ribonuclease D|Ribonuclease H-like domain	GO:0000166|GO:0003676|GO:0003824|GO:0005622|GO:0006139|GO:0008033|GO:0008408|GO:0033890|GO:0044237	G3DSA:3.30.420.10|MF_01899|PF00570|PF01612|PS50967|PTHR12124|PTHR12124:SF3|SM00341|SM00474|SSF47819|SSF53098|TIGR01388
rne|rne|AP_001710.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003029|IPR004659|IPR012340|IPR019307|IPR021968|IPR022967	Nucleic acid-binding, OB-fold|Polyribonucleotide phosphorylase C-terminal|RNA-binding domain, S1|RNA-binding protein AU-1/Ribonuclease E/G|Ribonuclease E/G|Ribosomal protein S1, RNA-binding domain	GO:0003723|GO:0004540|GO:0006396	G3DSA:2.40.50.140|PF00575|PF10150|PF12111|PS50126|PTHR30001|SM00316|SSF50249|TIGR00757
rng|rng|AP_003788.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003029|IPR004659|IPR012340|IPR019307|IPR022967	Nucleic acid-binding, OB-fold|RNA-binding domain, S1|RNA-binding protein AU-1/Ribonuclease E/G|Ribonuclease E/G|Ribosomal protein S1, RNA-binding domain	GO:0003723|GO:0004540|GO:0006396	G3DSA:2.40.50.140|PF00575|PF10150|PS50126|PTHR30001|SM00316|SSF50249|TIGR00757
rnhA|rnhA|AP_000869.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002156|IPR012337|IPR022892	Ribonuclease H|Ribonuclease H domain|Ribonuclease H-like domain	GO:0003676|GO:0004523	G3DSA:3.30.420.10|MF_00042|PF00075|PS50879|PTHR10642|SSF53098
rnhB|rnhB|AP_000843.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001352|IPR012337|IPR022898|IPR024567	Ribonuclease H-like domain|Ribonuclease HII|Ribonuclease HII/HIII|Ribonuclease HII/HIII domain	GO:0003676|GO:0003723|GO:0004523	G3DSA:3.30.420.10|MF_00052_B|PF01351|PTHR10954|SSF53098
rnk|rnk|AP_001257.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001437|IPR023459	Transcription elongation factor GreA/GreB|Transcription elongation factor, GreA/GreB, C-terminal	GO:0003677|GO:0032784	G3DSA:1.10.286.20|G3DSA:3.10.50.30|PF01272|PIRSF006092|SSF54534
rnpA|rnpA|AP_004089.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000100|IPR014721|IPR020568	Ribonuclease P|Ribosomal protein S5 domain 2-type fold|Ribosomal protein S5 domain 2-type fold, subgroup	GO:0000049|GO:0004526|GO:0008033	G3DSA:3.30.230.10|PF00825|SSF54211|TIGR00188
rnr|rnr|AP_004679.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001900|IPR003029|IPR004476|IPR011129|IPR011805|IPR012340|IPR013223|IPR013668|IPR022966|IPR022967	Cold shock protein|Nucleic acid-binding, OB-fold|RNA-binding domain, S1|Ribonuclease B, N-terminal OB domain|Ribonuclease II/R|Ribonuclease II/R, conserved site|Ribonuclease II/ribonuclease R|Ribonuclease R|Ribonuclease R winged-helix domain|Ribosomal protein S1, RNA-binding domain	GO:0003676|GO:0003723|GO:0004518|GO:0004540|GO:0016070	G3DSA:2.40.50.140|MF_01895|PF00575|PF00773|PF08206|PF08461|PS01175|PS50126|PTHR23355|PTHR23355:SF9|SM00316|SM00357|SM00955|SSF50249|TIGR00358|TIGR02063
rnt|rnt|AP_002274.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR005987|IPR006055|IPR012337|IPR013520	Exonuclease|Exonuclease, RNase T/DNA polymerase III|Ribonuclease H-like domain|Ribonuclease T	GO:0003676|GO:0004527|GO:0004540|GO:0005622|GO:0006396	G3DSA:3.30.420.10|MF_00157|PF00929|SM00479|SSF53098|TIGR01298
rob|rob|AP_004884.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR009057|IPR010499|IPR011256|IPR018060|IPR018062|IPR020449	Bacterial transcription activator, effector binding|DNA binding HTH domain, AraC-type|HTH domain AraC-type, conserved site|Homeodomain-like|Regulatory factor, effector, bacterial|Transcription regulator HTH, AraC- type	GO:0003677|GO:0003700|GO:0005622|GO:0006355|GO:0043565	G3DSA:1.10.10.60|G3DSA:3.20.80.10|PF00165|PF06445|PR00032|PS00041|PS01124|PTHR24792|PTHR24792:SF1|SM00342|SM00871|SSF46689|SSF55136
rof|rof|AP_000849.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR009778|IPR023534	Modulator of Rho-dependent transcription termination|Rof/RNase P-like		PF07073|SSF101744
rpe|rpe|AP_004404.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000056|IPR011060|IPR013785|IPR026019	Aldolase-type TIM barrel|Ribulose-phosphate 3-epimerase|Ribulose-phosphate 3-epimerase-like|Ribulose-phosphate binding barrel	GO:0003824|GO:0004750|GO:0005975|GO:0006098|GO:0008152|GO:0016857	G3DSA:3.20.20.70|PF00834|PIRSF001461|PS01085|PS01086|PTHR11749|SSF51366|TIGR01163
rpiA|rpiA|AP_003472.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004788|IPR020672	Ribose 5-phosphate isomerase, type A|Ribose-5-phosphate isomerase, type A, subgroup	GO:0004751|GO:0009052	G3DSA:3.30.70.260|G3DSA:3.40.50.1360|MF_00170|PF06026|PTHR11934|PTHR11934:SF0|SSF100950|SSF75445|TIGR00021
rpiB|rpiB|AP_004592.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003500|IPR004785	Ribose 5-phosphate isomerase B|Sugar-phosphate isomerase, RpiB/LacA/LacB family	GO:0004751|GO:0005975|GO:0006098|GO:0016853	G3DSA:3.40.1400.10|PF02502|PIRSF005384|PTHR30345|SSF89623|TIGR00689|TIGR01120
rpiR|rpiR|AP_004591.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000281|IPR001347|IPR009057|IPR011991	Helix-turn-helix protein RpiR|Homeodomain-like|Sugar isomerase (SIS)|Winged helix-turn-helix DNA-binding domain	GO:0003677|GO:0003700|GO:0005975|GO:0006355|GO:0030246	G3DSA:1.10.10.10|G3DSA:3.40.50.10490|PF01380|PF01418|PS51071|PS51464|PTHR10937|SSF46689|SSF53697
rplA|rplA|AP_003835.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002143|IPR005878|IPR016094|IPR016095|IPR023673|IPR023674	Ribosomal protein L1|Ribosomal protein L1, 2-layer alpha/beta-sandwich|Ribosomal protein L1, 3-layer alpha/beta-sandwich|Ribosomal protein L1, bacterial-type|Ribosomal protein L1, conserved site|Ribosomal protein L1, superfamily	GO:0003723|GO:0003735|GO:0005622|GO:0006412|GO:0015934	G3DSA:3.30.190.20|G3DSA:3.40.50.790|MF_01318_B|PF00687|PIRSF002155|PS01199|PTHR23105|PTHR23105:SF5|SSF56808|TIGR01169
rplB|rplB|AP_004473.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002171|IPR005880|IPR008991|IPR012340|IPR014722|IPR014726|IPR022666|IPR022669|IPR022671	Nucleic acid-binding, OB-fold|Ribosomal Proteins L2, RNA binding domain|Ribosomal protein L2|Ribosomal protein L2 domain 2|Ribosomal protein L2, C-terminal|Ribosomal protein L2, bacterial/organellar-type|Ribosomal protein L2, conserved site|Ribosomal protein L2, domain 3|Translation protein SH3-like domain	GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0015934|GO:0016740	G3DSA:2.30.30.30|G3DSA:2.40.50.140|G3DSA:4.10.950.10|MF_01320_B|PF00181|PF03947|PIRSF002158|PS00467|PTHR13691|PTHR13691:SF5|SSF50104|SSF50249|TIGR01171
rplC|rplC|AP_004470.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000597|IPR009000|IPR019926|IPR019927	Ribosomal protein L3|Ribosomal protein L3, bacterial/organelle-type|Ribosomal protein L3, conserved site|Translation elongation/initiation factor/Ribosomal, beta-barrel	GO:0003735|GO:0005622|GO:0005840|GO:0006412	G3DSA:2.40.30.10|G3DSA:4.10.960.10|MF_01325_B|PF00297|PS00474|PTHR11229|SSF50447|TIGR03625
rplD|rplD|AP_004471.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002136|IPR013005|IPR023574	Ribosomal protein L4 domain|Ribosomal protein L4/L1e|Ribosomal protein L4/L1e, bacterial-type	GO:0003735|GO:0005840|GO:0006412	G3DSA:3.40.1370.10|MF_01328_B|PF00573|PTHR10746|SSF52166|TIGR03953
rplE|rplE|AP_004482.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002132|IPR020929|IPR020930|IPR022803	Ribosomal protein L5|Ribosomal protein L5 domain|Ribosomal protein L5, bacterial-type|Ribosomal protein L5, conserved site	GO:0003735|GO:0005622|GO:0005840|GO:0006412	G3DSA:3.30.1440.10|MF_01333_B|PF00281|PF00673|PIRSF002161|PS00358|PTHR11994|PTHR11994:SF4|SSF55282
rplF|rplF|AP_004485.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000702|IPR002358|IPR019906|IPR020040	Ribosomal protein L6|Ribosomal protein L6, alpha-beta domain|Ribosomal protein L6, bacterial-type|Ribosomal protein L6, conserved site	GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843	G3DSA:3.90.930.12|MF_01365_B|PF00347|PIRSF002162|PR00059|PS00525|PTHR11655|PTHR11655:SF6|SSF56053|TIGR03654
rplI|rplI|AP_004703.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000244|IPR009027|IPR020069|IPR020070|IPR020594	Ribosomal protein L9|Ribosomal protein L9, C-terminal|Ribosomal protein L9, N-terminal|Ribosomal protein L9, bacteria/chloroplast|Ribosomal protein L9/RNase H1, N-terminal	GO:0003735|GO:0005622|GO:0005840|GO:0006412	G3DSA:3.10.430.100|G3DSA:3.40.5.10|MF_00503|PF01281|PF03948|PS00651|PTHR21368|PTHR21368:SF20|SSF55653|SSF55658|TIGR00158
rplJ|rplJ|AP_003834.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001790|IPR002363|IPR022973	Ribosomal protein L10|Ribosomal protein L10, eubacterial, conserved site|Ribosomal protein L10/acidic P0	GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0042254	MF_00362|PD968187|PF00466|PS01109|PTHR11560|PTHR11560:SF8|SSF160369
rplK|rplK|AP_003836.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000911|IPR006519|IPR020783|IPR020784|IPR020785	Ribosomal protein L11|Ribosomal protein L11, C-terminal|Ribosomal protein L11, N-terminal|Ribosomal protein L11, bacterial-type|Ribosomal protein L11, conserved site	GO:0003735|GO:0005840|GO:0006412	G3DSA:1.10.10.250|G3DSA:3.30.1550.10|MF_00736_B|PD001367|PF00298|PF03946|PS00359|PTHR11661|SM00649|SSF46906|SSF54747|TIGR01632
rplL|rplL|AP_003833.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000206|IPR008932|IPR013823|IPR014719	Ribosomal protein L7/L12|Ribosomal protein L7/L12, C-terminal|Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like|Ribosomal protein L7/L12, oligomerisation	GO:0003735|GO:0005622|GO:0005840|GO:0006412	G3DSA:1.20.5.710|G3DSA:3.30.1390.10|MF_00368|PD001326|PF00542|PTHR11809|SSF48300|SSF54736|TIGR00855
rplM|rplM|AP_003773.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR005822|IPR005823|IPR023563|IPR023564	Ribosomal protein L13|Ribosomal protein L13 domain|Ribosomal protein L13, bacterial-type|Ribosomal protein L13, conserved site	GO:0003735|GO:0005840|GO:0006412	G3DSA:3.90.1180.10|MF_01366_B|PF00572|PIRSF002181|PS00783|PTHR11545|PTHR11545:SF2|SSF52161|TIGR01066
rplN|rplN|AP_004480.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000218|IPR005745|IPR019972|IPR023571	Ribosomal protein L14 conserved site|Ribosomal protein L14 domain|Ribosomal protein L14, bacterial-type|Ribosomal protein L14b/L23e	GO:0003735|GO:0005840|GO:0006412|GO:0015934	G3DSA:2.40.150.20|MF_01367_B|PF00238|PS00049|PTHR11761|PTHR11761:SF3|SSF50193|TIGR01067
rplO|rplO|AP_004489.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001196|IPR005749|IPR021131	Ribosomal protein L15, bacterial-type|Ribosomal protein L15, conserved site|Ribosomal protein L18e/L15P	GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0015934	G3DSA:3.100.10.10|MF_01341_B|PF00828|PS00475|PTHR12934|PTHR12934:SF3|SSF52080|TIGR01071
rplP|rplP|AP_004477.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000114|IPR016180|IPR020798	Ribosomal protein L10e/L16|Ribosomal protein L16|Ribosomal protein L16, conserved site	GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843	G3DSA:3.90.1170.10|MF_01342|PF00252|PR00060|PS00586|PS00701|PTHR12220|PTHR12220:SF13|SSF54686|TIGR01164
rplQ|rplQ|AP_004496.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000456	Ribosomal protein L17	GO:0003735|GO:0005622|GO:0005840|GO:0006412	G3DSA:3.90.1030.10|MF_01368|PF01196|PS01167|PTHR14413|PTHR14413:SF13|SSF64263|TIGR00059
rplR|rplR|AP_004486.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004389|IPR005484	Ribosomal protein L18, bacterial-type|Ribosomal protein L18/L5	GO:0003735|GO:0005622|GO:0005840|GO:0006412	G3DSA:3.30.420.100|MF_01337_B|PF00861|PTHR12899|SSF53137|TIGR00060
rplS|rplS|AP_003187.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001857|IPR008991|IPR018257	Ribosomal protein L19|Ribosomal protein L19, conserved site|Translation protein SH3-like domain	GO:0003735|GO:0005622|GO:0005840|GO:0006412	MF_00402|PF01245|PIRSF002191|PR00061|PS01015|PTHR15680|PTHR15680:SF8|SSF50104|TIGR01024
rplT|rplT|AP_002336.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR005813	Ribosomal protein L20	GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843	G3DSA:1.10.1900.20|MF_00382|PD002389|PF00453|PR00062|PS00937|PTHR10986|PTHR10986:SF1|SSF74731|TIGR01032
rplU|rplU|AP_003729.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001787|IPR018258	Ribosomal protein L21|Ribosomal protein L21, conserved site	GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412	MF_01363|PF00829|PS01169|PTHR21349|SSF141091|TIGR00061
rplV|rplV|AP_004475.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001063|IPR005727|IPR018260	Ribosomal protein L22, bacterial/chloroplast-type|Ribosomal protein L22/L17|Ribosomal protein L22/L17, conserved site	GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0015934	G3DSA:3.90.470.10|MF_01331_B|PF00237|PS00464|PTHR13501|SSF54843|TIGR01044
rplW|rplW|AP_004472.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001014|IPR012677|IPR012678|IPR013025	Nucleotide-binding, alpha-beta plait|Ribosomal protein L23/L15e core domain|Ribosomal protein L23/L25, conserved site|Ribosomal protein L25/L23	GO:0000166|GO:0003735|GO:0005622|GO:0005840|GO:0006412	G3DSA:3.30.70.330|MF_01369_B|PF00276|PS00050|PTHR11620|SSF54189
rplX|rplX|AP_004481.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003256|IPR005824|IPR005825|IPR008991|IPR014722	KOW|Ribosomal protein L2 domain 2|Ribosomal protein L24|Ribosomal protein L24/L26, conserved site|Translation protein SH3-like domain	GO:0003735|GO:0005622|GO:0005840|GO:0006412	G3DSA:2.30.30.30|MF_01326_B|PF00467|PS01108|PTHR12903|SM00739|SSF50104|TIGR01079
rplY|rplY|AP_002783.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR011035|IPR020055|IPR020056	Ribosomal protein L25, short-form|Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain|Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain	GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0008097	G3DSA:2.40.240.10|MF_01336|PD012503|PF01386|SSF50715
rpmA|rpmA|AP_003728.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001684|IPR018261	Ribosomal protein L27|Ribosomal protein L27, conserved site	GO:0003735|GO:0005622|GO:0005840|GO:0006412	G3DSA:2.40.50.100|MF_00539|PD003114|PF01016|PR00063|PS00831|PTHR15893|SSF110324|TIGR00062
rpmB|rpmB|AP_004154.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001383	Ribosomal protein L28	GO:0003735|GO:0005622|GO:0005840|GO:0006412	G3DSA:2.30.170.40|MF_00373|PF00830|SSF143800|TIGR00009
rpmC|rpmC|AP_004478.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001854|IPR018254	Ribosomal protein L29|Ribosomal protein L29, conserved site	GO:0003735|GO:0005622|GO:0005840|GO:0006412	G3DSA:1.10.287.310|MF_00374|PF00831|PS00579|PTHR10916|PTHR10916:SF0|SSF46561|TIGR00012
rpmD|rpmD|AP_004488.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR005996|IPR016082|IPR018038	Ribosomal protein L30, bacterial-type|Ribosomal protein L30, conserved site|Ribosomal protein L30, ferredoxin-like fold domain	GO:0003735|GO:0006412|GO:0015934	G3DSA:3.30.1390.20|MF_01371_B|PF00327|PIRSF002211|PS00634|SSF55129|TIGR01308
rpmE|rpmE|AP_003873.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002150	Ribosomal protein L31	GO:0003735|GO:0005622|GO:0005840|GO:0006412	PF01197|PR01249|SSF143800|TIGR00105
rpmF|rpmF|AP_001715.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002677|IPR011332	Ribosomal protein L32p|Ribosomal protein, zinc-binding domain	GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0015934	MF_00340|PF01783|SSF57829|TIGR01031
rpmG|rpmG|AP_004155.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001705|IPR011332|IPR018264	Ribosomal protein L33|Ribosomal protein L33, conserved site|Ribosomal protein, zinc-binding domain	GO:0003735|GO:0005622|GO:0005840|GO:0006412	MF_00294|PF00471|PS00582|PTHR15238|SSF57829|TIGR01023
rpmH|rpmH|AP_004090.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000271|IPR020939	Ribosomal protein L34|Ribosomal protein L34, conserved site	GO:0003735|GO:0005622|GO:0005840|GO:0006412	MF_00391|PD003101|PF00468|PS00784|PTHR14503|PTHR14503:SF0|TIGR01030
rpmI|rpmI|AP_002337.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001706|IPR018265|IPR021137	Ribosomal protein L35|Ribosomal protein L35, conserved site|Ribosomal protein L35, non-mitochondrial	GO:0003735|GO:0005622|GO:0005840|GO:0006412	MF_00514|PF01632|PR00064|PS00936|SSF143034|TIGR00001
rpmJ|rpmJ|AP_004491.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000473	Ribosomal protein L36	GO:0003735|GO:0005622|GO:0005840|GO:0006412	MF_00251|PD002101|PF00444|PS00828|PTHR18804|SSF57840|TIGR01022
rpoA|rpoA|AP_004495.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR009025|IPR011260|IPR011261|IPR011262|IPR011263|IPR011773	DNA-directed RNA polymerase, RBP11-like|DNA-directed RNA polymerase, RpoA/D/Rpb3-type|DNA-directed RNA polymerase, alpha subunit|DNA-directed RNA polymerase, dimerisation|DNA-directed RNA polymerase, insert domain|RNA polymerase, alpha subunit, C-terminal	GO:0003677|GO:0003899|GO:0006351|GO:0046983	G3DSA:1.10.150.20|G3DSA:2.170.120.12|G3DSA:3.30.1360.10|MF_00059|PD001179|PF01000|PF01193|PF03118|PTHR32108|PTHR32108:SF2|SM00662|SSF47789|SSF55257|SSF56553|TIGR02027
rpoB|rpoB|AP_003832.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR007120|IPR007121|IPR007641|IPR007642|IPR007644|IPR007645|IPR010243|IPR014724|IPR015712|IPR019462	DNA-directed RNA polymerase, beta subunit|DNA-directed RNA polymerase, beta subunit, external 1 domain|DNA-directed RNA polymerase, subunit 2|DNA-directed RNA polymerase, subunit 2, domain 6|RNA polymerase Rpb2, OB-fold|RNA polymerase Rpb2, domain 2|RNA polymerase Rpb2, domain 3|RNA polymerase Rpb2, domain 7|RNA polymerase, beta subunit, conserved site|RNA polymerase, beta subunit, protrusion	GO:0003677|GO:0003899|GO:0006351|GO:0032549	G3DSA:2.30.150.10|G3DSA:2.40.270.10|G3DSA:2.40.50.100|G3DSA:2.40.50.150|G3DSA:3.90.1100.10|G3DSA:3.90.1110.10|MF_01321|PF00562|PF04560|PF04561|PF04563|PF04565|PF10385|PS01166|PTHR20856|PTHR20856:SF3|SSF64484|TIGR02013
rpoC|rpoC|AP_003831.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000722|IPR006592|IPR007066|IPR007080|IPR007081|IPR007083|IPR009010|IPR012754	Aspartate decarboxylase-like domain|DNA-directed RNA polymerase, subunit beta-prime|RNA polymerase Rpb1, domain 1|RNA polymerase Rpb1, domain 3|RNA polymerase Rpb1, domain 4|RNA polymerase Rpb1, domain 5|RNA polymerase, N-terminal|RNA polymerase, alpha subunit	GO:0003677|GO:0003899|GO:0006351	G3DSA:2.40.40.20|G3DSA:2.40.50.100|MF_01322|MF_01323|PF00623|PF04983|PF04997|PF04998|PF05000|PTHR19376|PTHR19376:SF4|SM00663|SSF64484|TIGR02386
rpoD|rpoD|AP_003617.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000943|IPR007127|IPR007624|IPR007627|IPR007630|IPR007631|IPR009042|IPR011991|IPR012760|IPR013324|IPR013325|IPR014284	RNA polymerase sigma factor 70, non-essential domain|RNA polymerase sigma factor 70, region 1.1|RNA polymerase sigma factor RpoD, C-terminal|RNA polymerase sigma factor, region 2|RNA polymerase sigma factor, region 3/4|RNA polymerase sigma-70|RNA polymerase sigma-70 like domain|RNA polymerase sigma-70 region 1.2|RNA polymerase sigma-70 region 2|RNA polymerase sigma-70 region 3|RNA polymerase sigma-70 region 4|Winged helix-turn-helix DNA-binding domain	GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987	G3DSA:1.10.10.10|G3DSA:1.10.601.10|PF00140|PF03979|PF04539|PF04542|PF04545|PF04546|PR00046|PS00715|PS00716|PTHR30603|SSF88659|SSF88946|TIGR02393|TIGR02937
rpoE|rpoE|AP_003159.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000838|IPR007627|IPR011991|IPR013249|IPR013324|IPR013325|IPR014284|IPR014286	RNA polymerase sigma factor 70, ECF, conserved site|RNA polymerase sigma factor 70, region 4 type 2|RNA polymerase sigma factor, region 2|RNA polymerase sigma factor, region 3/4|RNA polymerase sigma-70 RpoE type|RNA polymerase sigma-70 like domain|RNA polymerase sigma-70 region 2|Winged helix-turn-helix DNA-binding domain	GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987	G3DSA:1.10.10.10|G3DSA:1.10.1740.10|PF04542|PF08281|PS01063|SSF88659|SSF88946|TIGR02937|TIGR02939
rpoH|rpoH|AP_004331.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000943|IPR007627|IPR007630|IPR011991|IPR012759|IPR013324|IPR013325|IPR014284	RNA polymerase sigma factor RpoH, proteobacteria|RNA polymerase sigma factor, region 2|RNA polymerase sigma factor, region 3/4|RNA polymerase sigma-70|RNA polymerase sigma-70 like domain|RNA polymerase sigma-70 region 2|RNA polymerase sigma-70 region 4|Winged helix-turn-helix DNA-binding domain	GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0008270|GO:0009408|GO:0016987	G3DSA:1.10.10.10|G3DSA:1.10.601.10|PF04542|PF04545|PR00046|PS00715|PS00716|PTHR30376|PTHR30376:SF0|SSF88659|SSF88946|TIGR02392|TIGR02937
rpoN|rpoN|AP_003745.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000394|IPR007046|IPR007634	RNA polymerase sigma factor 54|RNA polymerase sigma factor 54, DNA-binding|RNA polymerase sigma factor 54, core-binding	GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987	PF00309|PF04552|PF04963|PIRSF000774|PR00045|PS00717|PS00718|PS50044|PTHR32248|PTHR32248:SF2|TIGR02395
rpoS|rpoS|AP_003308.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000943|IPR007624|IPR007627|IPR007630|IPR009042|IPR011991|IPR012761|IPR013324|IPR013325|IPR014284	RNA polymerase sigma factor RpoS, proteobacteria|RNA polymerase sigma factor, region 2|RNA polymerase sigma factor, region 3/4|RNA polymerase sigma-70|RNA polymerase sigma-70 like domain|RNA polymerase sigma-70 region 1.2|RNA polymerase sigma-70 region 2|RNA polymerase sigma-70 region 3|RNA polymerase sigma-70 region 4|Winged helix-turn-helix DNA-binding domain	GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987	G3DSA:1.10.10.10|G3DSA:1.10.601.10|PF00140|PF04539|PF04542|PF04545|PR00046|PS00715|PS00716|PTHR30603|SSF88659|SSF88946|TIGR02394|TIGR02937
rpoZ|rpoZ|AP_004143.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003716|IPR006110|IPR012293	DNA-directed RNA polymerase, omega subunit|RNA polymerase subunit, RPB6/omega|RNA polymerase, subunit omega/K/RPABC2	GO:0003677|GO:0003899|GO:0006351|GO:0030880	G3DSA:3.90.940.10|MF_00366|PF01192|SSF63562|TIGR00690
rpsA|rpsA|AP_001541.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000110|IPR003029|IPR012340|IPR022967	Nucleic acid-binding, OB-fold|RNA-binding domain, S1|Ribosomal protein S1|Ribosomal protein S1, RNA-binding domain	GO:0003723|GO:0003735|GO:0005840|GO:0006412	G3DSA:2.40.50.140|PF00575|PIRSF002111|PR00681|PS50126|PTHR10724|SM00316|SSF50249|TIGR00717
rpsB|rpsB|AP_000829.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001865|IPR005706|IPR018130|IPR023591	Ribosomal protein S2|Ribosomal protein S2, bacteria/mitochondria/plastid|Ribosomal protein S2, conserved site|Ribosomal protein S2, flavodoxin-like domain	GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0015935	G3DSA:1.10.287.610|G3DSA:3.40.50.10490|MF_00291_B|PF00318|PR00395|PS00962|PS00963|PTHR12534|SSF52313|TIGR01011
rpsC|rpsC|AP_004476.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001351|IPR004044|IPR004087|IPR005704|IPR009019|IPR015946	K Homology domain|K Homology domain, type 2|K homology domain, prokaryotic type|K homology domain-like, alpha/beta|Ribosomal protein S3, C-terminal|Ribosomal protein S3, bacterial	GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0015935	G3DSA:3.30.1140.32|G3DSA:3.30.300.20|PF00189|PF07650|PTHR11760|PTHR11760:SF10|SM00322|SSF54814|SSF54821|TIGR01009
rpsD|rpsD|AP_004494.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001912|IPR002942|IPR005709|IPR018079|IPR022801	RNA-binding S4 domain|Ribosomal protein S4, bacterial-type|Ribosomal protein S4, conserved site|Ribosomal protein S4/S9|Ribosomal protein S4/S9, N-terminal	GO:0003723|GO:0003735|GO:0005622|GO:0006412|GO:0015935|GO:0019843	G3DSA:1.10.1050.10|G3DSA:3.10.290.10|MF_01306_B|PF00163|PF01479|PS00632|PS50889|PTHR11831|PTHR11831:SF4|SM00363|SSF55174|TIGR01017
rpsE|rpsE|AP_004487.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000851|IPR005324|IPR005712|IPR013810|IPR014720|IPR014721|IPR018192|IPR020568	Double-stranded RNA-binding-like domain|Ribosomal protein S5|Ribosomal protein S5 domain 2-type fold|Ribosomal protein S5 domain 2-type fold, subgroup|Ribosomal protein S5, C-terminal|Ribosomal protein S5, N-terminal|Ribosomal protein S5, N-terminal, conserved site|Ribosomal protein S5, bacterial-type	GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0015935	G3DSA:3.30.160.20|G3DSA:3.30.230.10|MF_01307_B|PF00333|PF03719|PS00585|PS50881|PTHR13718|PTHR13718:SF57|SSF54211|SSF54768|TIGR01021
rpsF|rpsF|AP_004700.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000529|IPR014717|IPR020814|IPR020815	Ribosomal protein S6|Ribosomal protein S6, conserved site|Ribosomal protein S6, plastid/chloroplast|Translation elongation factor EF1B/ribosomal protein S6	GO:0003735|GO:0005840|GO:0006412|GO:0019843	G3DSA:3.30.70.60|MF_00360|PF01250|PS01048|SSF54995|TIGR00166
rpsG|rpsG|AP_004449.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000235|IPR005717|IPR020606|IPR023798	Ribosomal protein S5/S7|Ribosomal protein S7 domain|Ribosomal protein S7, bacterial/organellar-type|Ribosomal protein S7, conserved site	GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0015935	G3DSA:1.10.455.10|MF_00480_B|PF00177|PIRSF002122|PS00052|PTHR11205|PTHR11205:SF13|SSF47973|TIGR01029
rpsH|rpsH|AP_004484.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000630	Ribosomal protein S8	GO:0003735|GO:0005622|GO:0005840|GO:0006412	G3DSA:3.30.1370.30|G3DSA:3.30.1490.10|MF_01302_B|PF00410|PS00053|PTHR11758|SSF56047
rpsI|rpsI|AP_003772.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000754|IPR014721|IPR020568|IPR020574|IPR023035	Ribosomal protein S5 domain 2-type fold|Ribosomal protein S5 domain 2-type fold, subgroup|Ribosomal protein S9|Ribosomal protein S9, bacterial/plastid|Ribosomal protein S9, conserved site	GO:0003735|GO:0005622|GO:0005840|GO:0006412	G3DSA:3.30.230.10|MF_00532_B|PF00380|PS00360|PTHR21569|SSF54211
rpsJ|rpsJ|AP_004469.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001848|IPR018268|IPR027486	Ribosomal protein S10|Ribosomal protein S10 domain|Ribosomal protein S10, conserved site	GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412	G3DSA:3.30.70.600|MF_00508|PF00338|PR00971|PS00361|PTHR11700|PTHR11700:SF2|SSF54999|TIGR01049
rpsK|rpsK|AP_004493.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001971|IPR018102|IPR019981	Ribosomal S11, conserved site|Ribosomal protein S11|Ribosomal protein S11, bacterial-type	GO:0003735|GO:0005622|GO:0005840|GO:0006412	G3DSA:3.30.420.80|MF_01310|PF00411|PIRSF002131|PS00054|PTHR11759|PTHR11759:SF3|SSF53137|TIGR03632
rpsL|rpsL|AP_004448.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR005679|IPR006032|IPR012340	Nucleic acid-binding, OB-fold|Ribosomal protein S12, bacteria|Ribosomal protein S12/S23	GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0015935	G3DSA:2.40.50.140|MF_00403_B|PF00164|PIRSF002133|PR01034|PS00055|PTHR11652|SSF50249|TIGR00981
rpsM|rpsM|AP_004492.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001892|IPR010979|IPR018269|IPR019980|IPR027437	30s ribosomal protein S13, C-terminal|Ribosomal protein S13|Ribosomal protein S13, bacterial-type|Ribosomal protein S13, conserved site|Ribosomal protein S13-like, H2TH	GO:0003676|GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412	G3DSA:1.10.8.50|G3DSA:4.10.910.10|MF_01315|PF00416|PIRSF002134|PS00646|PS50159|PTHR10871|SSF46946|TIGR03631
rpsN|rpsN|AP_004483.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001209|IPR018271|IPR023036	Ribosomal protein S14|Ribosomal protein S14, bacterial/plastid|Ribosomal protein S14, conserved site	GO:0003735|GO:0005622|GO:0005840|GO:0006412	G3DSA:4.10.830.10|MF_00537|PF00253|PS00527|PTHR19836|PTHR19836:SF1|SSF57716
rpsO|rpsO|AP_003710.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000589|IPR005290|IPR009068	Ribosomal protein S15|Ribosomal protein S15, bacterial-type|S15/NS1, RNA-binding	GO:0003735|GO:0005622|GO:0005840|GO:0006412	G3DSA:1.10.287.10|MF_01343_B|PD157043|PF00312|PS00362|PTHR23321|PTHR23321:SF10|SSF47060|TIGR00952
rpsP|rpsP|AP_003190.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000307|IPR020592|IPR023803	Ribosomal protein S16|Ribosomal protein S16 domain|Ribosomal protein S16, conserved site	GO:0003735|GO:0005622|GO:0005840|GO:0006412	G3DSA:3.30.1320.10|MF_00385|PF00886|PS00732|PTHR12919|PTHR12919:SF12|SSF54565|TIGR00002
rpsQ|rpsQ|AP_004479.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000266|IPR012340|IPR019979|IPR019984	Nucleic acid-binding, OB-fold|Ribosomal protein S17|Ribosomal protein S17, bacterial-type|Ribosomal protein S17, conserved site	GO:0003735|GO:0005622|GO:0005840|GO:0006412	G3DSA:2.40.50.140|MF_01345_B|PD001295|PF00366|PR00973|PS00056|PTHR10744|SSF50249|TIGR03635
rpsR|rpsR|AP_004702.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001648|IPR018275	Ribosomal protein S18|Ribosomal protein S18, conserved site	GO:0003735|GO:0005622|GO:0005840|GO:0006412	G3DSA:4.10.640.10|MF_00270|PD002239|PF01084|PR00974|PS00057|PTHR13479|PTHR13479:SF16|SSF46911|TIGR00165
rpsS|rpsS|AP_004474.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002222|IPR005732|IPR020934|IPR023575	Ribosomal protein S19 conserved site|Ribosomal protein S19, bacterial-type|Ribosomal protein S19, superfamily|Ribosomal protein S19/S15	GO:0003723|GO:0003735|GO:0005840|GO:0006412|GO:0015935	G3DSA:3.30.860.10|MF_00531|PF00203|PIRSF002144|PR00975|PS00323|PTHR11880|PTHR11880:SF6|SSF54570|TIGR01050
rpsT|rpsT|AP_000687.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002583	Ribosomal protein S20	GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412	G3DSA:1.20.58.110|MF_00500|PD004231|PF01649|SSF46992|TIGR00029
rpsU|rpsU|AP_003615.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001911|IPR018278	Ribosomal protein S21|Ribosomal protein S21, conserved site	GO:0003735|GO:0005622|GO:0005840|GO:0006412	MF_00358|PD005521|PF01165|PR00976|PS01181|TIGR00030
rraA|rraA|AP_003880.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR005493|IPR010203|IPR014339	Regulator of ribonuclease activity A|Regulator of ribonuclease activity A, gammaproteobacteria|Ribonuclease E inhibitor RraA/Dimethylmenaquinone methyltransferase	GO:0008428|GO:0051252	G3DSA:3.50.30.40|PF03737|SSF89562|TIGR01935|TIGR02998
rrmA|rrmA|AP_002441.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR016718|IPR025714	Methyltransferase domain|rRNA (guanine-N1-)-methyltransferase A, predicted	GO:0008168	G3DSA:3.40.50.150|PF13847|PIRSF018249|PTHR10108|PTHR10108:SF312|SSF53335
rrmJ|rrmJ|AP_003722.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002877|IPR004512|IPR015507	Ribosomal RNA large subunit methyltransferase E|Ribosomal RNA methyltransferase E, gammaproteobacteria|Ribosomal RNA methyltransferase FtsJ domain	GO:0001510|GO:0006364|GO:0008168|GO:0016436|GO:0032259	G3DSA:3.40.50.150|MF_01547|PF01728|PIRSF005461|PTHR10920|PTHR10920:SF11|SSF53335|TIGR00438
rsd|rsd|AP_003823.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR007448	Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ	GO:0006355	PF04353|PIRSF016548
rseA|rseA|AP_003158.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR005572|IPR005573|IPR026279	Anti sigma-E protein RseA, C-terminal|Anti sigma-E protein RseA, N-terminal|Sigma-E factor negative regulatory protein RseA	GO:0006950|GO:0016989|GO:0070258	PF03872|PF03873|PIRSF016938|SSF89069
rseB|rseB|AP_003157.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR005588	MucB/RseB		G3DSA:2.50.20.10|PF03888|PIRSF005427
rseC|rseC|AP_003156.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR007359|IPR026268	Positive regulator of sigma(E), RseC/MucC|Protein RseC		PF04246|PIRSF004923|PS51257
rsgA|rsgA|AP_004664.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004881|IPR010914|IPR027417	EngC GTPase|P-loop containing nucleoside triphosphate hydrolase|Ribosome biogenesis GTPase RsgA, putative	GO:0003924|GO:0005525	G3DSA:1.10.40.50|G3DSA:3.40.50.300|MF_01820|PF03193|PS50936|PTHR32120|PTHR32120:SF3|SSF52540|TIGR00157
rsmB|rsmB|AP_004502.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001678|IPR004573|IPR006027|IPR018314|IPR023267|IPR023541	Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p|Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site|NusB/RsmB/TIM44|RNA (C5-cytosine) methyltransferase|rRNA small subunit methyltransferase B|rRNA small subunit methyltransferase B, enterobacteriaceae	GO:0003723|GO:0006355|GO:0006364|GO:0008168|GO:0008649	G3DSA:1.10.287.730|G3DSA:1.10.940.10|G3DSA:3.30.70.1170|G3DSA:3.40.50.150|MF_01856|PF01029|PF01189|PR02008|PS01153|PTHR22807|PTHR22807:SF12|SSF48013|SSF53335|TIGR00563
rsmC|rsmC|AP_004858.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002052|IPR007848|IPR013675|IPR023543	DNA methylase, N-6 adenine-specific, conserved site|Methyltransferase small domain|Methyltransferase small, N-terminal|rRNA small subunit methyltransferase C	GO:0003676|GO:0006364|GO:0008168|GO:0008649|GO:0008990|GO:0032259	G3DSA:3.40.50.150|MF_01862|PF05175|PF08468|PS00092|PTHR18895|PTHR18895:SF6|SSF53335
rspA|rspA|AP_002202.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001354|IPR013341|IPR013342|IPR018110	Mandelate racemase/muconate lactonizing enzyme|Mandelate racemase/muconate lactonizing enzyme, C-terminal|Mandelate racemase/muconate lactonizing enzyme, N-terminal|Mandelate racemase/muconate lactonizing enzyme, conserved site	GO:0003824|GO:0008152|GO:0009063	G3DSA:3.20.20.120|G3DSA:3.30.390.10|PF02746|PF13378|PS00908|PS00909|PTHR13794|PTHR13794:SF5|SM00922|SSF51604|SSF54826
rspB|rspB|AP_002201.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002085|IPR002328|IPR011032|IPR013149|IPR013154|IPR016040	Alcohol dehydrogenase GroES-like|Alcohol dehydrogenase superfamily, zinc-type|Alcohol dehydrogenase, C-terminal|Alcohol dehydrogenase, zinc-type, conserved site|GroES-like|NAD(P)-binding domain	GO:0008270|GO:0016491|GO:0055114	G3DSA:3.40.50.720|G3DSA:3.90.180.10|PF00107|PF08240|PS00059|PTHR11695|PTHR11695:SF38|SSF50129|SSF51735
rssA|rssA|AP_001860.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001423|IPR002641|IPR016035	Acyl transferase/acyl hydrolase/lysophospholipase|Lysophospholipase patatin, conserved site|Patatin/Phospholipase A2-related	GO:0004622|GO:0006629|GO:0008152|GO:0046470	G3DSA:3.40.1090.10|PF01734|PS01237|PTHR14226|SSF52151
rssB|rssB|AP_001861.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001789|IPR011006	CheY-like superfamily|Signal transduction response regulator, receiver domain	GO:0000156|GO:0000160|GO:0006355	G3DSA:3.40.50.2300|PF00072|PS50110|PTHR24423|SM00448|SSF52172
rstA|rstA|AP_002229.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001789|IPR001867|IPR011006|IPR011991|IPR016032	CheY-like superfamily|Signal transduction response regulator, C-terminal|Signal transduction response regulator, C-terminal effector|Signal transduction response regulator, receiver domain|Winged helix-turn-helix DNA-binding domain	GO:0000156|GO:0000160|GO:0003677|GO:0006355	G3DSA:1.10.10.10|G3DSA:3.40.50.2300|PF00072|PF00486|PS50110|PTHR26402|PTHR26402:SF63|SM00448|SM00862|SSF46894|SSF52172
rstB|rstB|AP_002230.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003594|IPR003660|IPR003661|IPR004358|IPR005467|IPR009082	HAMP linker domain|Histidine kinase-like ATPase, ATP-binding domain|Signal transduction histidine kinase, core|Signal transduction histidine kinase, homodimeric domain|Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal	GO:0000155|GO:0004871|GO:0005524|GO:0007165|GO:0016020|GO:0016021|GO:0016310|GO:0016772	G3DSA:1.10.287.130|G3DSA:3.30.565.10|PF00512|PF00672|PF02518|PR00344|PS50109|PS50885|PTHR24423|PTHR24423:SF123|SM00304|SM00387|SM00388|SSF47384|SSF55874
rsuA|rsuA|AP_002781.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000748|IPR002942|IPR006145|IPR018496|IPR020103	Pseudouridine synthase, RsuA/RluB/C/D/E/F|Pseudouridine synthase, RsuA/RluB/E/F|Pseudouridine synthase, RsuA/RluB/E/F, conserved site|Pseudouridine synthase, catalytic domain|RNA-binding S4 domain	GO:0001522|GO:0003723|GO:0009451|GO:0009982|GO:0016866	G3DSA:3.10.290.10|PF00849|PF01479|PS01149|PS50889|PTHR21600|PTHR21600:SF5|SM00363|SSF55120|SSF55174|TIGR00093
rsxA|rsxA|AP_002249.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003667|IPR011293	Electron transport complex, Rnf/Nqr|Electron transport complex, RnfA	GO:0016020|GO:0022900	MF_00459|PF02508|PIRSF006102|PTHR30335|TIGR01943
rsxB|rsxB|AP_002250.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001450|IPR007202|IPR010207|IPR016463|IPR017896|IPR017900	4Fe-4S binding domain|4Fe-4S domain|4Fe-4S ferredoxin, iron-sulphur binding, conserved site|4Fe-4S ferredoxin-type, iron-sulpur binding domain|Electron transport complex, RnfB|Electron transport complex, RnfB, Proteobacteria	GO:0005886|GO:0009055|GO:0022900|GO:0051536	G3DSA:3.30.70.20|MF_00463|PF00037|PF04060|PIRSF005784|PS00198|PS51379|PS51656|PTHR11938|PTHR11938:SF29|SSF54862|TIGR01944
rsxC|rsxC|AP_002251.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001450|IPR009051|IPR010208|IPR011538|IPR012285|IPR017896|IPR017900|IPR019554|IPR026902	4Fe-4S binding domain|4Fe-4S ferredoxin, iron-sulphur binding, conserved site|4Fe-4S ferredoxin-type, iron-sulpur binding domain|Alpha-helical ferredoxin|Electron transport complex, RnfC|Fumarate reductase, C-terminal|NADH:ubiquinone oxidoreductase, 51kDa subunit|RnfC Barrel sandwich hybrid domain|Soluble ligand binding domain	GO:0009055|GO:0016020|GO:0016491|GO:0016651|GO:0051536|GO:0051539|GO:0055114	G3DSA:1.10.1060.10|MF_00461|PF01512|PF10531|PF12838|PF13375|PS00198|PS51379|PTHR11780|SSF142019|SSF46548|TIGR01945
rsxD|rsxD|AP_002252.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004338|IPR011303	Electron transport complex, RnfD|NADH-quinone reductase NQR2/RnfD	GO:0006810|GO:0016020|GO:0016021|GO:0022900	PF03116|PTHR30578|TIGR01946
rsxE|rsxE|AP_002254.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003667|IPR010968	Electron transport complex, Rnf/Nqr|Electron transport complex, RnfE	GO:0016020|GO:0022900	MF_00478|PF02508|PIRSF006102|PTHR30586|TIGR01948
rsxG|rsxG|AP_002253.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR007329|IPR010209|IPR022989	Electron transport complex, RnfG|Electron transport complex, RnfG, proteobacteria|FMN-binding	GO:0005886|GO:0009055|GO:0010181|GO:0016020|GO:0022900	MF_00479|PF04205|PIRSF006091|SM00900|TIGR01947
rtcA|rtcA|AP_004371.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000228|IPR013791|IPR013792|IPR017770|IPR023797	RNA 3'-terminal phosphate cyclase|RNA 3'-terminal phosphate cyclase domain|RNA 3'-terminal phosphate cyclase type 1|RNA 3'-terminal phosphate cyclase, insert domain|RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta	GO:0003824|GO:0003963|GO:0006396	G3DSA:3.30.360.20|G3DSA:3.65.10.20|PF01137|PF05189|PTHR11096|SSF52913|SSF55205|TIGR03399
rtcB|rtcB|AP_004370.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001233	RtcB family		PF01139|PS01288|PTHR11118|SSF103365
rtcR|rtcR|AP_004369.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002078|IPR003593|IPR009715|IPR017183|IPR025943|IPR027417	AAA+ ATPase domain|P-loop containing nucleoside triphosphate hydrolase|RNA polymerase sigma factor 54 interaction domain|Regulator of RNA terminal phosphate cyclase|Sigma-54 interaction domain, ATP-binding site 2|Sigma54-dependent transcriptional activator, RtcR	GO:0000166|GO:0005524|GO:0006355|GO:0008134|GO:0017111	G3DSA:1.10.8.60|G3DSA:3.40.50.300|PF00158|PF06956|PIRSF037354|PS00676|PS50045|PTHR10919|PTHR10919:SF1|SM00382|SSF52540
rtn|rtn|AP_002774.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001633|IPR024744	Diguanylate phosphodiesterase, EAL domain|Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain		G3DSA:3.20.20.450|PF00563|PF12792|PTHR30394|PTHR30394:SF0|SM00052|SSF141868
rumA|rumA|AP_003351.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001566|IPR002792|IPR010280|IPR012340	(Uracil-5)-methyltransferase|23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD|Nucleic acid-binding, OB-fold|TRAM domain	GO:0003723|GO:0006396|GO:0008173	G3DSA:2.40.50.140|G3DSA:3.40.50.150|MF_01010|PF01938|PF05958|PS01230|PS01231|PS50926|PTHR11061|PTHR11061:SF22|SSF50249|SSF53335|TIGR00479
rumB|rumB|AP_001490.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR010280|IPR011825	(Uracil-5)-methyltransferase|23S rRNA (uracil(747)-C(5))-methyltransferase RlmC	GO:0006396|GO:0008173|GO:0016070|GO:0016436	G3DSA:3.40.50.150|PF05958|PTHR11061|PTHR11061:SF22|SSF53335|TIGR02085
rusA|rusA|AP_001195.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR008822|IPR016281	Crossover junction endodeoxyribonuclease, RusA|Crossover junction endodeoxyribonuclease, RusA-like	GO:0000287|GO:0006281|GO:0006310|GO:0008821	G3DSA:3.30.1330.70|PF05866|PIRSF001007|SSF103084
ruvA|ruvA|AP_002481.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000085|IPR003583|IPR010994|IPR011114|IPR012340|IPR013849	Bacterial DNA recombination protein RuvA|DNA helicase, Holliday junction RuvA type, domain I, bacterial|DNA helicase, Holliday junction RuvA type, domain III, C-terminal|Helix-hairpin-helix DNA-binding motif, class 1|Nucleic acid-binding, OB-fold|RuvA domain 2-like	GO:0003677|GO:0003678|GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379	G3DSA:1.10.150.20|G3DSA:1.10.8.10|G3DSA:2.40.50.140|MF_00031|PF01330|PF07499|SM00278|SSF46929|SSF47781|SSF50249|TIGR00084
ruvB|ruvB|AP_002480.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003593|IPR004605|IPR008823|IPR008824|IPR011991|IPR027417	AAA+ ATPase domain|DNA helicase, Holliday junction RuvB type|DNA helicase, Holliday junction RuvB type, C-terminal|DNA helicase, Holliday junction RuvB type, N-terminal|P-loop containing nucleoside triphosphate hydrolase|Winged helix-turn-helix DNA-binding domain	GO:0000166|GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0017111	G3DSA:1.10.10.10|G3DSA:1.10.8.60|G3DSA:3.40.50.300|MF_00016|PD005323|PF05491|PF05496|PTHR13779|PTHR13779:SF2|SM00382|SSF46785|SSF52540|TIGR00635
ruvC|ruvC|AP_002483.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002176|IPR012337|IPR020563	Crossover junction endodeoxyribonuclease RuvC|Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site|Ribonuclease H-like domain	GO:0003676|GO:0004520|GO:0006281|GO:0006310|GO:0008821	G3DSA:3.30.420.10|MF_00034|PF02075|PR00696|PS01321|PTHR30194|PTHR30194:SF0|SSF53098|TIGR00228
rzoD|rzoD|AP_001202.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR010346	Lipoprotein Rz1	GO:0019064|GO:0019867	PF06085|PS51257
rzoR|rzoR|AP_001992.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR010346	Lipoprotein Rz1	GO:0019064|GO:0019867	PF06085|PS51257
rzpD|rzpD|AP_001201.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004929	Probable endopeptidase, Rz-type		PF03245
rzpR|rzpR|AP_001991.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004929	Probable endopeptidase, Rz-type		PF03245
sanA|sanA|AP_002741.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003848|IPR014729|IPR023604	Domain of unknown function DUF218|Rossmann-like alpha/beta/alpha sandwich fold|Uncharacterised protein family SanA		G3DSA:3.40.50.620|PF02698|PIRSF005011|PTHR30336|PTHR30336:SF0
sapA|sapA|AP_001920.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000914|IPR023765	Bacterial extracellular solute-binding protein, family 5|Bacterial extracellular solute-binding protein, family 5, conserved site	GO:0005215|GO:0006810	G3DSA:3.10.105.10|G3DSA:3.90.76.10|PF00496|PIRSF002741|PS01040|PTHR30290|PTHR30290:SF0|SSF53850
sapB|sapB|AP_001919.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000515	Binding-protein-dependent transport systems inner membrane component	GO:0005215|GO:0006810|GO:0016020	G3DSA:1.10.3720.10|PF00528|PS50928|PTHR30465|PTHR30465:SF3|SSF161098
sapC|sapC|AP_001918.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000515|IPR025966	Binding-protein-dependent transport systems inner membrane component|Oligopeptide transport permease C-like, N-terminal domain	GO:0005215|GO:0006810|GO:0016020	G3DSA:1.10.3720.10|PF00528|PF12911|PS50928|PTHR30465|PTHR30465:SF1|SSF161098
sapD|sapD|AP_001917.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003439|IPR003593|IPR010066|IPR013563|IPR027417	AAA+ ATPase domain|ABC transporter-like|Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal|Oligopeptide/dipeptide ABC transporter, C-terminal|P-loop containing nucleoside triphosphate hydrolase	GO:0000166|GO:0005524|GO:0015197|GO:0015833|GO:0016020|GO:0016887|GO:0017111	G3DSA:3.40.50.300|PF00005|PF08352|PS50893|PTHR24220|PTHR24220:SF132|SM00382|SSF52540|TIGR01727
sapF|sapF|AP_001916.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003439|IPR003593|IPR017871|IPR027417	AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase	GO:0000166|GO:0005524|GO:0016887|GO:0017111	G3DSA:3.40.50.300|PF00005|PS00211|PS50893|PTHR24220|PTHR24220:SF81|SM00382|SSF52540
sbcB|sbcB|AP_002611.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR012337|IPR013520|IPR013620|IPR023607	Exodeoxyribonuclease I|Exonuclease C-terminal|Exonuclease, RNase T/DNA polymerase III|Ribonuclease H-like domain	GO:0003676|GO:0004529|GO:0006281|GO:0008852	G3DSA:3.30.420.10|PF00929|PF08411|PIRSF000977|SSF53098
sbcC|sbcC|AP_001047.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004592|IPR027050|IPR027417	Nuclease SbcC, gammaproteobacteria type|Nuclease SbcCD subunit C|P-loop containing nucleoside triphosphate hydrolase	GO:0004518|GO:0006281	G3DSA:3.40.50.300|PF13476|PF13558|PTHR32114|PTHR32114:SF0|SSF52540|TIGR00618
sbcD|sbcD|AP_001048.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004593|IPR004843|IPR026843	Exonuclease SbcD|Metallophosphoesterase domain|Nuclease SbcD C-terminal domain	GO:0004527|GO:0006259|GO:0016787	G3DSA:3.60.21.10|PF00149|PF12320|PTHR30337|PTHR30337:SF0|SSF56300|TIGR00619
sbmA|sbmA|AP_001028.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR009248|IPR011527	ABC transporter, transmembrane domain, type 1|SbmA/BacA-like	GO:0005215|GO:0005524|GO:0006810|GO:0009276|GO:0016021|GO:0042626|GO:0055085	PF05992|PTHR11384|PTHR11384:SF2|SSF90123
sbmC|sbmC|AP_002609.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR010499|IPR011256|IPR024911	Bacterial transcription activator, effector binding|DNA gyrase inhibitor GyrI|Regulatory factor, effector, bacterial	GO:0008657	G3DSA:3.20.80.10|MF_01896|PF06445|SM00871|SSF55136
sbp|sbp|AP_003892.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000957|IPR005669|IPR006059	Bacterial extracellular solute-binding, family 1|Sulphate/thiosulphate-binding, conserved site|Thiosulphate/Sulfate-binding protein	GO:0005215|GO:0006810|GO:0008271|GO:0008272|GO:0015419|GO:0030288	G3DSA:3.40.190.10|PF01547|PS00401|PS00757|PTHR30368|SSF53850|TIGR00971
sdaA|sdaA|AP_002433.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004644|IPR005130|IPR005131	Iron-sulphur-dependent L-serine dehydratase single chain form|Serine dehydratase beta chain|Serine dehydratase-like, alpha subunit	GO:0003941|GO:0006094|GO:0051539	G3DSA:3.30.1330.90|PF03313|PF03315|PTHR30182|PTHR30182:SF0|SSF143548|TIGR00720
sdaB|sdaB|AP_003363.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004644|IPR005130|IPR005131	Iron-sulphur-dependent L-serine dehydratase single chain form|Serine dehydratase beta chain|Serine dehydratase-like, alpha subunit	GO:0003941|GO:0006094|GO:0051539	G3DSA:3.30.1330.90|PF03313|PF03315|PTHR30182|PTHR30182:SF0|SSF143548|TIGR00720
sdaC|sdaC|AP_003362.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004694	Hydroxy amino acid transporter	GO:0005215|GO:0006810|GO:0016021	TIGR00814
sdhA|sdhA|AP_001361.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003952|IPR003953|IPR011281|IPR013027|IPR014006|IPR015939|IPR027477	FAD binding domain|FAD-dependent pyridine nucleotide-disulphide oxidoreductase|Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal|Fumarate reductase/succinate dehydrogenase, FAD-binding site|Succinate dehydrogenase, flavoprotein subunit|Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain|Succinate dehydrogenase/fumarate reductase, flavoprotein subunit	GO:0006099|GO:0016491|GO:0016627|GO:0022900|GO:0050660|GO:0055114	G3DSA:1.20.58.100|G3DSA:3.50.50.60|G3DSA:3.90.700.10|G3DSA:4.10.80.40|PF00890|PF02910|PIRSF000171|PR00368|PS00504|PTHR11632|PTHR11632:SF5|SSF46977|SSF51905|SSF56425|TIGR01812|TIGR01816
sdhB|sdhB|AP_001362.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001041|IPR004489|IPR009051|IPR012285|IPR012675|IPR017896|IPR017900|IPR025192	2Fe-2S ferredoxin-type domain|4Fe-4S ferredoxin, iron-sulphur binding, conserved site|4Fe-4S ferredoxin-type, iron-sulpur binding domain|Alpha-helical ferredoxin|Beta-grasp domain|Fumarate reductase, C-terminal|Succinate dehydogenase/fumarate reductase N-terminal|Succinate dehydrogenase/fumarate reductase iron-sulphur protein	GO:0006099|GO:0009055|GO:0016491|GO:0051536|GO:0055114	G3DSA:1.10.1060.10|G3DSA:3.10.20.30|PF13085|PF13534|PS00198|PS51085|PS51379|PTHR11921|SSF46548|SSF54292|TIGR00384
sdhC|sdhC|AP_001359.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000701|IPR014314|IPR014361|IPR018495	Succinate dehydrogenase, cytochrome b subunit, conserved site|Succinate dehydrogenase, cytochrome b556 subunit|Succinate dehydrogenase, cytochrome b560 subunit|Succinate dehydrogenase/Fumarate reductase, transmembrane subunit	GO:0000104|GO:0006099|GO:0009055|GO:0016020|GO:0016627|GO:0045281	G3DSA:1.20.1300.10|PF01127|PIRSF000178|PS01000|PS01001|PTHR10978|SSF81343|TIGR02970
sdhD|sdhD|AP_001360.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000701|IPR014312	Succinate dehydrogenase, hydrophobic membrane anchor|Succinate dehydrogenase/Fumarate reductase, transmembrane subunit	GO:0000104|GO:0006099|GO:0016021|GO:0016627|GO:0020037	G3DSA:1.20.1300.10|PF01127|PIRSF000169|SSF81343|TIGR02968
sdiA|sdiA|AP_002531.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000792|IPR005143|IPR011991|IPR016032	Signal transduction response regulator, C-terminal effector|Transcription factor LuxR-like, autoinducer-binding domain|Transcription regulator LuxR, C-terminal|Winged helix-turn-helix DNA-binding domain	GO:0003677|GO:0003700|GO:0005622|GO:0006355|GO:0043565	G3DSA:1.10.10.10|G3DSA:3.30.450.80|PF00196|PF03472|PR00038|PS00622|PS50043|PTHR30379|SM00421|SSF46894|SSF75516
secA|secA|AP_000761.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000185|IPR004027|IPR011115|IPR011116|IPR011130|IPR014018|IPR020937|IPR027417	P-loop containing nucleoside triphosphate hydrolase|Protein translocase subunit SecA|SEC-C motif|SecA DEAD-like, N-terminal|SecA Wing/Scaffold|SecA conserved site|SecA motor DEAD|SecA preprotein, cross-linking domain	GO:0005524|GO:0006605|GO:0006886|GO:0016020|GO:0017038	G3DSA:1.10.3060.10|G3DSA:3.40.50.300|G3DSA:3.90.1440.10|MF_01382|PF01043|PF02810|PF07516|PF07517|PR00906|PS01312|PS51196|PTHR30612|SM00957|SM00958|SSF52540|SSF81767|SSF81886|TIGR00963
secB|secB|AP_004182.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003708	Bacterial protein export chaperone SecB	GO:0015031|GO:0051082|GO:0051262	G3DSA:3.10.420.10|MF_00821|PF02556|PR01594|SSF54611|TIGR00809
secD|secD|AP_001058.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR005791|IPR022645|IPR022646|IPR022813|IPR027398	Protein translocase subunit SecD|Protein-export membrane protein SecD/SecF, archaeal and bacterial|Protein-export membrane protein SecD/SecF, bacterial|Protein-export membrane protein SecD/SecF/SecDF, conserved site|SecD export protein N-terminal TM domain	GO:0006886|GO:0015450	G3DSA:1.20.1640.10|MF_01463_B|PF02355|PF07549|PF13721|PTHR30081|PTHR30081:SF1|SSF82866|TIGR00916|TIGR01129
secE|secE|AP_003838.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001901|IPR005807	Protein translocase complex, SecE/Sec61-gamma subunit|SecE subunit of protein translocation complex	GO:0006605|GO:0006886|GO:0009306|GO:0015450|GO:0016020|GO:0016021	G3DSA:1.20.5.1030|PF00584|PR01650|PS01067|TIGR00964
secF|secF|AP_001059.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR005665|IPR022645|IPR022646|IPR022813	Protein-export membrane protein SecD/SecF, archaeal and bacterial|Protein-export membrane protein SecD/SecF, bacterial|Protein-export membrane protein SecD/SecF/SecDF, conserved site|Protein-export membrane protein SecF, bacterial	GO:0006886|GO:0015450	G3DSA:1.20.1640.10|MF_01464_B|PF02355|PF07549|PR01755|PTHR30081|PTHR30081:SF0|SSF82866|TIGR00916|TIGR00966
secG|secG|AP_003718.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004692	Preprotein translocase SecG subunit	GO:0009306|GO:0015450|GO:0016021	PF03840|PR01651|TIGR00810
secM|secM|AP_000760.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR009502	Secretion monitor	GO:0045182	MF_01332|PD089227|PF06558|PIRSF004572
secY|secY|AP_004490.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002208|IPR023201|IPR026593	Protein translocase subunit SecY|SecY subunit domain|SecY/SEC61-alpha family	GO:0015031|GO:0016020	G3DSA:1.10.3370.10|MF_01465|PF00344|PIRSF004557|PR00303|PS00755|PS00756|PTHR10906|PTHR10906:SF2|SSF103491|TIGR00967
selA|selA|AP_004201.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004534|IPR015421|IPR015424|IPR018319|IPR025862	L-seryl-tRNA selenium transferase|L-seryl-tRNA selenium transferase N-terminal domain|L-seryl-tRNA selenium transferase-like|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1	GO:0001514|GO:0003824|GO:0004125|GO:0005737|GO:0030170	G3DSA:3.40.640.10|MF_00423|PF03841|PF12390|PTHR32328|PTHR32328:SF0|SSF53383|TIGR00474
selB|selB|AP_004202.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000795|IPR004161|IPR004535|IPR009000|IPR009001|IPR011991|IPR015190|IPR015191|IPR027417	Elongation factor, GTP-binding domain|P-loop containing nucleoside triphosphate hydrolase|Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal|Translation elongation factor EFTu/EF1A, domain 2|Translation elongation factor SelB, winged helix, type 2|Translation elongation factor SelB, winged helix, type 3|Translation elongation factor, selenocysteine-specific|Translation elongation/initiation factor/Ribosomal, beta-barrel|Winged helix-turn-helix DNA-binding domain	GO:0001514|GO:0003723|GO:0003746|GO:0003924|GO:0005525|GO:0005737	G3DSA:1.10.10.10|G3DSA:2.40.30.10|G3DSA:3.40.50.300|PF00009|PF03144|PF09106|PF09107|PR00315|PS00301|PTHR23115|PTHR23115:SF39|SSF46785|SSF50447|SSF50465|SSF52540|TIGR00475
selD|selD|AP_002383.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000728|IPR004536|IPR010918|IPR016188|IPR023061	AIR synthase related protein, N-terminal domain|AIR synthase-related protein, C-terminal domain|PurM, N-terminal-like|Selenide water dikinase|Selenide, water dikinase, class I	GO:0003824|GO:0004756|GO:0005524|GO:0016260	G3DSA:3.30.1330.10|G3DSA:3.90.650.10|MF_00625|PF00586|PF02769|PIRSF036407|PS51257|PTHR10256|PTHR10256:SF0|SSF55326|SSF56042|TIGR00476
seqA|seqA|AP_001325.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR005621|IPR010985|IPR013321|IPR026577	Arc-type ribbon-helix-helix|Regulation modulator SeqA|Replication modulator SeqA, C-terminal DNA-binding domain|Ribbon-helix-helix	GO:0003677|GO:0006355|GO:0032297	G3DSA:1.10.1220.10|G3DSA:1.20.1380.10|MF_00908|PF03925|PIRSF019401|SSF47598|SSF82808
serA|serA|AP_003471.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002912|IPR006139|IPR006140|IPR016040	ACT domain|D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding|D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain|NAD(P)-binding domain	GO:0008152|GO:0016597|GO:0016616|GO:0048037|GO:0051287|GO:0055114	G3DSA:3.30.70.260|G3DSA:3.40.50.720|PF00389|PF01842|PF02826|PS00065|PS00670|PS00671|PTHR10996|PTHR10996:SF18|SSF51735|SSF52283|SSF55021
serB|serB|AP_004876.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004469|IPR006383|IPR023190|IPR023214	HAD-like domain|HAD-superfamily hydrolase, subfamily IB, PSPase-like|Phosphoserine phosphatase SerB|Phosphoserine phosphatase, domain 2	GO:0004647|GO:0006564|GO:0008152|GO:0016791	G3DSA:1.10.150.210|G3DSA:3.40.50.1000|PF00702|PTHR10000|PTHR10000:SF0|SSF56784|TIGR00338|TIGR01488
serC|serC|AP_001537.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000192|IPR003248|IPR015421|IPR015422|IPR015424|IPR020578|IPR022278	Aminotransferase class-V pyridoxal-phosphate binding site|Aminotransferase, class V/Cysteine desulfurase|Phosphoserine aminotransferase|Phosphoserine aminotransferase, subgroup|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2	GO:0003824|GO:0004648|GO:0006564|GO:0008152|GO:0030170	G3DSA:3.40.640.10|G3DSA:3.90.1150.10|MF_00160|PF00266|PIRSF000525|PS00595|PTHR21152|PTHR21152:SF1|SSF53383|TIGR01364
serS|serS|AP_001523.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002314|IPR002317|IPR006195|IPR010978|IPR015866	Aminoacyl-tRNA synthetase, class II|Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain|Serine-tRNA ligase, type1|Serine-tRNA synthetase, type1, N-terminal|tRNA-binding arm	GO:0000166|GO:0004812|GO:0004828|GO:0005524|GO:0005737|GO:0006418|GO:0006434	G3DSA:1.10.287.40|G3DSA:3.30.930.10|MF_00176|PF00587|PF02403|PIRSF001529|PR00981|PS50862|PTHR11778|SSF46589|SSF55681|TIGR00414
setA|setA|AP_000734.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004750|IPR011701|IPR016196|IPR020846	Major facilitator superfamily|Major facilitator superfamily domain|Major facilitator superfamily domain, general substrate transporter|Sugar efflux	GO:0008643|GO:0015542|GO:0016021|GO:0055085	G3DSA:1.20.1250.20|PF07690|PS50850|PTHR24003|SSF103473|TIGR00899
setB|setB|AP_002767.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004750|IPR011701|IPR016196|IPR020846	Major facilitator superfamily|Major facilitator superfamily domain|Major facilitator superfamily domain, general substrate transporter|Sugar efflux	GO:0008643|GO:0015542|GO:0016021|GO:0055085	G3DSA:1.20.1250.20|PF07690|PS50850|PTHR24003|SSF103473|TIGR00899
setC|setC|AP_004134.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004750|IPR011701|IPR016196|IPR020846	Major facilitator superfamily|Major facilitator superfamily domain|Major facilitator superfamily domain, general substrate transporter|Sugar efflux	GO:0008643|GO:0015542|GO:0016021|GO:0055085	G3DSA:1.20.1250.20|PF07690|PS50850|PTHR24003|SSF103473|TIGR00899
sfcA|sfcA|AP_002102.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001891|IPR012301|IPR012302|IPR015884|IPR016040|IPR023667	Malic enzyme, N-terminal|Malic enzyme, NAD-binding|Malic enzyme, conserved site|Malic oxidoreductase|NAD(P)-binding domain|NAD-dependent malic enzyme, proteobacteria	GO:0004470|GO:0006108|GO:0016491|GO:0016616|GO:0016619|GO:0046872|GO:0051287|GO:0055114	G3DSA:3.40.50.10380|G3DSA:3.40.50.720|MF_01619|PF00390|PF03949|PIRSF000106|PR00072|PS00331|PTHR23406|PTHR23406:SF2|SM00919|SSF51735|SSF53223
sfmA|sfmA|AP_001177.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000259|IPR008966	Adhesion domain|Fimbrial-type adhesion domain	GO:0007155|GO:0009289	G3DSA:2.60.40.1090|PF00419|SSF49401
sfmC|sfmC|AP_001178.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001829|IPR008962|IPR016147|IPR016148	PapD-like|Pili assembly chaperone, C-terminal domain|Pili assembly chaperone, N-terminal, bacterial|Pili assembly chaperone, bacterial	GO:0030288|GO:0043711|GO:0071555	G3DSA:2.60.40.1070|G3DSA:2.60.40.360|PF00345|PF02753|PR00969|PTHR30251|SSF49354|SSF49584
sfmD|sfmD|AP_001179.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000015|IPR018030|IPR025885|IPR025949	Fimbrial biogenesis outer membrane usher protein|Fimbrial membrane usher, conserved site|PapC N-terminal domain|PapC-like C-terminal domain	GO:0005215|GO:0005515|GO:0006810|GO:0016020	PF00577|PF13953|PF13954|PS01151|PTHR30451|PTHR30451:SF0|SSF141729
sfmF|sfmF|AP_001181.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000259|IPR008966	Adhesion domain|Fimbrial-type adhesion domain	GO:0007155|GO:0009289	G3DSA:2.60.40.1090|PF00419|SSF49401
sfmH|sfmH|AP_001180.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000259|IPR008966	Adhesion domain|Fimbrial-type adhesion domain	GO:0007155|GO:0009289	G3DSA:2.60.40.1090|PF00419|SSF49401
sfsA|sfsA|AP_000807.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR005224	Sugar fermentation stimulation protein		MF_00095|PF03749|PTHR30545|PTHR30545:SF0|TIGR00230
sfsB|sfsB|AP_003731.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR010982	Lambda repressor-like, DNA-binding domain	GO:0003677	G3DSA:1.10.260.40|PF13693|SSF47413
sgbE|sgbE|AP_004209.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001303|IPR004661	Class II aldolase/adducin N-terminal|L-ribulose-5-phosphate 4-epimerase	GO:0008270|GO:0008742|GO:0019572|GO:0046872	G3DSA:3.40.225.10|PF00596|PTHR22789|SM01007|SSF53639|TIGR00760
sgbH|sgbH|AP_004211.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001754|IPR011060|IPR013785	Aldolase-type TIM barrel|Orotidine 5'-phosphate decarboxylase domain|Ribulose-phosphate binding barrel	GO:0003824|GO:0004590|GO:0006207|GO:0008152	G3DSA:3.20.20.70|PF00215|PTHR30562|PTHR30562:SF2|SM00934|SSF51366
sgbU|sgbU|AP_004210.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004560|IPR013022	L-ribulose-5-phosphate 3-epimerase|Xylose isomerase-like, TIM barrel domain	GO:0005975|GO:0016861	G3DSA:3.20.20.150|PF01261|PTHR12110|SSF51658|TIGR00542
sgcA|sgcA|AP_004792.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002178|IPR016152	Phosphotransferase system, phosphoenolpyruvate-dependent sugar EIIA 2|Phosphotransferase/anion transporter	GO:0005215|GO:0005351|GO:0006810|GO:0009401	G3DSA:3.40.930.10|PF00359|PS00372|PS51094|SSF55804
sgcB|sgcB|AP_004795.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003501|IPR013011	Phosphotransferase system, EIIB component, type 2|Phosphotransferase system, EIIB component, type 2/3	GO:0005351|GO:0008982|GO:0009401	G3DSA:3.40.50.270|PF02302|PS51099|SSF52794
sgcC|sgcC|AP_004794.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004703|IPR013014|IPR013853	Galactitol permease IIC component|Phosphotransferase system, EIIC component, type 2|Phosphotransferase system, sugar-specific permease component	GO:0009401|GO:0015577|GO:0015796|GO:0016021	PF03611|PIRSF006304|PS51104|PTHR30321|TIGR00827
sgcE|sgcE|AP_004791.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000056|IPR011060|IPR013785	Aldolase-type TIM barrel|Ribulose-phosphate 3-epimerase-like|Ribulose-phosphate binding barrel	GO:0003824|GO:0005975|GO:0008152|GO:0016857	G3DSA:3.20.20.70|PF00834|PS01085|PS01086|PTHR11749|SSF51366
sgcQ|sgcQ|AP_004793.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR005137|IPR011060	Photosystem I BtpA, assembly|Ribulose-phosphate binding barrel	GO:0003824|GO:0008152	PD011184|PF03437|PIRSF005956|PTHR21381|PTHR21381:SF2|SSF51366|TIGR00259
sgcR|sgcR|AP_004790.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001034|IPR014036|IPR018356	DeoR C-terminal sensor domain|HTH DeoR N-terminal domain|Transcription regulator, HTH DeoR-type, conserved site	GO:0003700|GO:0005622|GO:0006355	G3DSA:3.40.50.1360|PF00455|PF08220|PS00894|PS51000|PTHR30363|PTHR30363:SF0|SM00420|SSF100950
sgcX|sgcX|AP_004796.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR008007|IPR023367	Peptidase M42|Peptidase M42, domain 2		G3DSA:2.40.30.40|G3DSA:3.40.630.10|PF05343|PIRSF001123|PTHR32481|PTHR32481:SF0|SSF101821|SSF53187
sgrR|sgrR|AP_000733.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000914|IPR023767|IPR025370	Bacterial extracellular solute-binding protein, family 5|Transcriptional regulator SgrR|Transcriptional regulator SgrR, N-terminal HTH domain	GO:0005215|GO:0006810	G3DSA:3.40.190.10|G3DSA:3.90.76.10|MF_01449|PF00496|PF12793|PTHR30512|PTHR30512:SF0|SSF53850
shiA|shiA|AP_002585.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004736|IPR005828|IPR005829|IPR016196|IPR020846	Citrate-proton symport|General substrate transporter|Major facilitator superfamily domain|Major facilitator superfamily domain, general substrate transporter|Sugar transporter, conserved site	GO:0005215|GO:0006810|GO:0016020|GO:0016021|GO:0022857|GO:0055085	G3DSA:1.20.1250.20|PF00083|PS00217|PS50850|PTHR24063|PTHR24063:SF153|SSF103473|TIGR00883
sieB|sieB|AP_001982.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR025982	Superinfection exclusion protein B		PF14163
sixA|sixA|AP_002940.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004449|IPR013078	Histidine phosphatase superfamily, clade-1|Phosphohistidine phosphatase SixA, subgroup	GO:0005737|GO:0006464|GO:0008969	G3DSA:3.40.50.1240|PF00300|SM00855|SSF53254|TIGR00249
slp|slp|AP_004287.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004658	Outer membrane lipoprotein Slp	GO:0019867	PF03843|PIRSF004982|PS51257|TIGR00752
slt|slt|AP_004880.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000189|IPR008258|IPR008939|IPR012289|IPR016026|IPR023346	Lysozyme-like domain|Lytic transglycosylase, superhelical U-shaped|Lytic transglycosylase, superhelical U-shaped and linker domain|Lytic transglycosylase, superhelical linker|Lytic transglycosylase-like, catalytic|Prokaryotic transglycosylase, active site	GO:0000270|GO:0004553|GO:0008933|GO:0016020|GO:0042597	G3DSA:1.10.1240.20|G3DSA:1.10.530.10|G3DSA:1.25.20.10|PF01464|PS00922|PTHR21666|PTHR21666:SF44|SSF48435|SSF53955
slyA|slyA|AP_002264.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000835|IPR011991|IPR023071|IPR023187	Transcription regulator HTH, MarR-type|Transcriptional regulator MarR-type, conserved site|Transcriptional regulator, SlyA|Winged helix-turn-helix DNA-binding domain	GO:0003700|GO:0005622|GO:0006355	G3DSA:1.10.10.10|MF_01819|PF01047|PR00598|PS01117|PS50995|SM00347|SSF46785
slyB|slyB|AP_002263.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR008816	Glycine zipper 2TM domain	GO:0019867	PF05433|PS51257
slyD|slyD|AP_004441.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001179|IPR023566	Peptidyl-prolyl cis-trans isomerase, FKBP-type|Peptidyl-prolyl cis-trans isomerase, FKBP-type, domain	GO:0006457	G3DSA:3.10.50.40|PF00254|PS50059|PTHR10516|PTHR10516:SF133|SSF54534
slyX|slyX|AP_004442.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR007236	SlyX		G3DSA:1.20.5.300|PF04102
smf|smf|AP_004505.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003488	DNA recombination-mediator protein A	GO:0009294	G3DSA:3.40.50.450|PF02481|PTHR32039|PTHR32039:SF0|SSF102405|TIGR00732
smg|smg|AP_004506.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR007456	Protein of unknown function DUF494		MF_00598|PF04361
smpA|smpA|AP_003197.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR007450|IPR026592	Lipoprotein SmpA/OmlA|Outer membrane protein assembly factor BamE	GO:0019867	MF_00925|PF04355|PS51257
smpB|smpB|AP_003200.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000037|IPR020081|IPR023620	Small protein B|SsrA-binding protein|SsrA-binding protein, conserved site	GO:0003723	G3DSA:2.40.280.10|MF_00023|PD004488|PF01668|PS01317|PTHR30308|SSF74982|TIGR00086
smtA|smtA|AP_001551.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR025714	Methyltransferase domain		G3DSA:3.40.50.150|PF13847|PTHR10108|PTHR10108:SF274|SSF53335
sodA|sodA|AP_003900.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001189|IPR019831|IPR019832|IPR019833	Manganese/iron superoxide dismutase|Manganese/iron superoxide dismutase, C-terminal|Manganese/iron superoxide dismutase, N-terminal|Manganese/iron superoxide dismutase, binding site	GO:0004784|GO:0006801|GO:0046872|GO:0055114	G3DSA:1.10.287.990|PF00081|PF02777|PIRSF000349|PR01703|PS00088|PTHR11404|PTHR11404:SF9|SSF46609|SSF54719
sodB|sodB|AP_002278.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001189|IPR019831|IPR019832|IPR019833	Manganese/iron superoxide dismutase|Manganese/iron superoxide dismutase, C-terminal|Manganese/iron superoxide dismutase, N-terminal|Manganese/iron superoxide dismutase, binding site	GO:0004784|GO:0006801|GO:0046872|GO:0055114	G3DSA:1.10.287.990|PF00081|PF02777|PIRSF000349|PR01703|PS00088|PTHR11404|PTHR11404:SF8|SSF46609|SSF54719
sodC|sodC|AP_002268.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001424|IPR018152|IPR024134	Superoxide dismutase (Cu/Zn) / chaperones|Superoxide dismutase, copper/zinc binding domain|Superoxide dismutase, copper/zinc, binding site	GO:0004784|GO:0006801|GO:0046872|GO:0055114	G3DSA:2.60.40.200|PF00080|PS00332|PTHR10003|SSF49329
sohA|sohA|AP_003675.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091				PD030562|SSF89447
sohB|sohB|AP_001898.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002142|IPR013703	Peptidase S49|Peptidase S49, N-terminal proteobacteria	GO:0004252|GO:0005886|GO:0006508|GO:0008233	G3DSA:3.90.226.10|PF01343|PF08496|PTHR32497|SSF52096
solA|solA|AP_001685.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR006076|IPR023493	FAD dependent oxidoreductase|N-methyl-L-tryptophan oxidase MTOX	GO:0016491|GO:0016647|GO:0055114	G3DSA:3.30.9.10|G3DSA:3.50.50.60|MF_00515|PF01266|PTHR10961|PTHR10961:SF7|SSF51905|SSF54373
soxR|soxR|AP_004564.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000551|IPR009061|IPR010211|IPR015358	DNA binding domain, putative|Redox-sensitive transcriptional activator SoxR|Transcription regulator HTH, MerR|Transcription regulator MerR, DNA binding	GO:0000166|GO:0003677|GO:0003700|GO:0005506|GO:0006355|GO:0006979	G3DSA:1.10.1660.10|PF00376|PF09278|PR00040|PS00552|PS50937|PTHR30204|PTHR30204:SF0|SM00422|SSF46955|TIGR01950
soxS|soxS|AP_004563.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR009057|IPR018060|IPR018062|IPR020449	DNA binding HTH domain, AraC-type|HTH domain AraC-type, conserved site|Homeodomain-like|Transcription regulator HTH, AraC- type	GO:0003677|GO:0003700|GO:0005622|GO:0006355|GO:0043565	G3DSA:1.10.10.60|PF00165|PR00032|PS00041|PS01124|PTHR24792|PTHR24792:SF1|SM00342|SSF46689
speA|speA|AP_003495.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000183|IPR002985|IPR009006|IPR022643|IPR022644|IPR022653|IPR022657	Alanine racemase/group IV decarboxylase, C-terminal|Arginine decarboxylase|Orn/DAP/Arg decarboxylase 2, C-terminal|Orn/DAP/Arg decarboxylase 2, N-terminal|Orn/DAP/Arg decarboxylase 2, conserved site|Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site|Ornithine/DAP/Arg decarboxylase	GO:0003824|GO:0006527|GO:0008295|GO:0008792	G3DSA:2.40.37.10|G3DSA:3.20.20.10|MF_01417|PF00278|PF02784|PIRSF001336|PR01179|PR01180|PS00878|PS00879|PTHR11482|PTHR11482:SF3|SSF50621|SSF51419|TIGR01273
speB|speB|AP_003494.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR005925|IPR006035|IPR020855|IPR023694|IPR023696	Agmatinase|Agmatinase-related|Ureohydrolase|Ureohydrolase domain|Ureohydrolase, manganese-binding site	GO:0008783|GO:0009446|GO:0016813|GO:0030145|GO:0046872	G3DSA:3.40.800.10|MF_01418|PF00491|PIRSF036979|PS01053|PS51409|PTHR11358|PTHR11358:SF12|SSF52768|TIGR01230
speC|speC|AP_003522.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000310|IPR005308|IPR008286|IPR011006|IPR011193|IPR015421|IPR015422|IPR015424|IPR027464	CheY-like superfamily|Orn/Lys/Arg decarboxylase, C-terminal|Orn/Lys/Arg decarboxylase, N-terminal|Orn/Lys/Arg decarboxylase, major domain|Ornithine decarboxylase, N-terminal domain|Ornithine/lysine/arginine decarboxylase|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2	GO:0003824|GO:0005737|GO:0006520|GO:0016831|GO:0030170	G3DSA:3.40.50.220|G3DSA:3.40.640.10|G3DSA:3.90.100.10|G3DSA:3.90.1150.10|PF01276|PF03709|PF03711|PIRSF009393|PS00703|PTHR30475|PTHR30475:SF0|SSF52172|SSF53383|SSF55904
speD|speD|AP_000781.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003826|IPR009165|IPR016067	S-adenosylmethionine decarboxylase family, prokaryotic|S-adenosylmethionine decarboxylase, bacterial|S-adenosylmethionine decarboxylase, core	GO:0004014|GO:0008295	G3DSA:3.60.90.10|MF_00465|PF02675|PIRSF001356|SSF56276|TIGR03331
speE|speE|AP_000782.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001045	Spermidine/spermine synthases family	GO:0003824	G3DSA:2.30.140.10|G3DSA:3.40.50.150|MF_00198|PF01564|PS01330|PS51006|PTHR11558|PTHR11558:SF11|SSF53335|TIGR00417
speF|speF|AP_001331.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000310|IPR005308|IPR008286|IPR011006|IPR011193|IPR015421|IPR015422|IPR015424|IPR027464|IPR027568	CheY-like superfamily|Orn/Lys/Arg decarboxylase, C-terminal|Orn/Lys/Arg decarboxylase, N-terminal|Orn/Lys/Arg decarboxylase, major domain|Ornithine decarboxylase SpeF|Ornithine decarboxylase, N-terminal domain|Ornithine/lysine/arginine decarboxylase|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2	GO:0003824|GO:0004586|GO:0005737|GO:0006520|GO:0016831|GO:0030170	G3DSA:3.40.50.220|G3DSA:3.40.640.10|G3DSA:3.90.100.10|G3DSA:3.90.1150.10|PF01276|PF03709|PF03711|PIRSF009393|PS00703|PTHR30475|PTHR30475:SF0|SSF52172|SSF53383|SSF55904|TIGR04301
speG|speG|AP_002205.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000182|IPR016181	Acyl-CoA N-acyltransferase|GNAT domain	GO:0008080	G3DSA:3.40.630.30|PF00583|PS51186|PTHR13256|SSF55729
spoT|spoT|AP_004142.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003607|IPR004095|IPR004811|IPR006674|IPR007685|IPR012675|IPR012676|IPR026020	(p)ppGpp synthetase|Beta-grasp domain|HD domain|HD/PDEase domain|RelA/SpoT|RelA/SpoT family|TGS|TGS-like	GO:0003824|GO:0008081|GO:0015969|GO:0046872	G3DSA:3.10.20.30|G3DSA:3.30.460.10|G3DSA:3.30.70.260|PF01966|PF02824|PF04607|PF13291|PTHR21262|SM00471|SM00954|SSF109604|SSF55021|SSF81271|SSF81301|TIGR00691
sppA|sppA|AP_002385.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002142|IPR004634|IPR004635	Peptidase S49|Peptidase S49, SppA|Peptidase S49, protease IV	GO:0006465|GO:0006508|GO:0008233|GO:0016021	G3DSA:3.90.226.10|PF01343|PIRSF001217|PTHR32497|PTHR32497:SF3|SSF52096|TIGR00705|TIGR00706
sprT|sprT|AP_003501.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR006640|IPR023483	Domain of unknown function SprT-like|Uncharacterised protein family SprT		MF_00746|PF10263|SM00731
spr|spr|AP_002773.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000064	Endopeptidase, NLPC/P60 domain		G3DSA:3.90.1720.10|PF00877|PS51257|PTHR21666|PTHR21666:SF1|SSF54001
spy|spy|AP_002362.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR012899	LTXXQ motif family protein	GO:0042597	PF07813|PIRSF034445
sra|sra|AP_002103.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR012607	Ribosomal protein S22	GO:0003735|GO:0005840|GO:0006412	PD049510|PF08136
srlA|srlA|AP_003269.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004699	Phosphotransferase system, enzyme II sorbitol-specific factor	GO:0009401|GO:0016021	PF03608|PIRSF038321|PS51107|TIGR00821
srlB|srlB|AP_003271.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004716|IPR018454	Phosphotransferase system, glucitol/sorbitol-specific IIA component|Phosphotransferase system, glucitol/sorbitol-specific IIA component, subgroup	GO:0005737|GO:0008982|GO:0009401	G3DSA:2.40.33.40|PD015842|PF03829|PS51097|SSF141530|TIGR00849
srlD|srlD|AP_003272.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002198|IPR002347|IPR016040|IPR020904	Glucose/ribitol dehydrogenase|NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR|Short-chain dehydrogenase/reductase, conserved site	GO:0008152|GO:0016491	G3DSA:3.40.50.720|PF00106|PR00080|PR00081|PS00061|PTHR24310|SSF51735
srlE|srlE|AP_003270.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004702|IPR011618|IPR011638	Phosphotransferease, sorbitol phosphotransferase enzyme II|Sorbitol phosphotransferase enzyme II, C-terminal|Sorbitol phosphotransferase enzyme II, N-terminal	GO:0008982|GO:0009401|GO:0016021	PF03612|PF07663|PS51102|TIGR00825
srlR|srlR|AP_003274.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001034|IPR011991|IPR014036|IPR018356	DeoR C-terminal sensor domain|HTH DeoR N-terminal domain|Transcription regulator, HTH DeoR-type, conserved site|Winged helix-turn-helix DNA-binding domain	GO:0003700|GO:0005622|GO:0006355	G3DSA:1.10.10.10|G3DSA:3.40.50.1360|PF00455|PF08220|PS00894|PS51000|PTHR30363|PTHR30363:SF0|SM00420|SSF100950|SSF46785
srmB|srmB|AP_003162.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000629|IPR001650|IPR011545|IPR014001|IPR014014|IPR027417	DNA/RNA helicase, DEAD/DEAH box type, N-terminal|Helicase, C-terminal|Helicase, superfamily 1/2, ATP-binding domain|P-loop containing nucleoside triphosphate hydrolase|RNA helicase, ATP-dependent, DEAD-box, conserved site|RNA helicase, DEAD-box type, Q motif	GO:0003676|GO:0004386|GO:0005524|GO:0008026	G3DSA:3.40.50.300|PF00270|PF00271|PS00039|PS51192|PS51194|PS51195|PTHR24031|PTHR24031:SF137|SM00487|SM00490|SSF52540
ssb|ssb|AP_004560.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000424|IPR011344|IPR012340	Nucleic acid-binding, OB-fold|Primosome PriB/single-strand DNA-binding|Single-strand DNA-binding	GO:0003697|GO:0006260	G3DSA:2.40.50.140|PF00436|PIRSF002070|PS50935|PTHR10302|SSF50249|TIGR00621
sseA|sseA|AP_003107.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001763	Rhodanese-like domain		G3DSA:3.40.250.10|PF00581|PTHR11364|PTHR11364:SF0|SM00450|SSF52821
sseB|sseB|AP_003108.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR009839	SseB		PF07179
ssnA|ssnA|AP_003439.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR006680|IPR011059|IPR017700	Amidohydrolase 1|Metal-dependent hydrolase, composite domain|Putative selenium metabolism protein SsnA	GO:0016787|GO:0016810	G3DSA:2.30.40.10|G3DSA:3.20.20.140|PF01979|PTHR11271|PTHR11271:SF3|SSF51338|SSF51556|TIGR03314
sspA|sspA|AP_003771.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004045|IPR004046|IPR010987|IPR012336|IPR017933	Glutathione S-transferase, C-terminal|Glutathione S-transferase, C-terminal-like|Glutathione S-transferase, N-terminal|Glutathione S-transferase/chloride channel, C-terminal|Thioredoxin-like fold	GO:0005515	G3DSA:1.20.1050.10|G3DSA:3.40.30.10|PF00043|PF02798|PS50404|PS50405|PTHR11260|PTHR11260:SF44|SSF47616|SSF52833
sspB|sspB|AP_003770.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR007481	Stringent starvation protein B		G3DSA:2.30.30.220|PF04386|PIRSF005276|SSF101738
sstT|sstT|AP_003638.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001991|IPR023025	Serine/threonine transporter SstT|Sodium:dicarboxylate symporter	GO:0006835|GO:0015565|GO:0015826|GO:0016020|GO:0017153|GO:0022889|GO:0032329	G3DSA:1.10.3860.10|MF_01582|PF00375|PR00173|PTHR11958|PTHR11958:SF26|SSF118215
ssuA|ssuA|AP_001566.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001638|IPR010067|IPR015168	ABC transporter, substrate-binding protein, aliphatic sulphonates|Extracellular solute-binding protein, family 3|NMT1/THI5-like	GO:0005215|GO:0006790|GO:0006810|GO:0016020|GO:0030288	G3DSA:3.40.190.10|PF09084|PTHR30024|PTHR30024:SF0|SM00062|SSF53850|TIGR01728
ssuB|ssuB|AP_001563.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003439|IPR003593|IPR017871|IPR017875|IPR027417	AAA+ ATPase domain|ABC transporter, aliphatic sulphonate import, ATP-binding protein|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase	GO:0000166|GO:0005215|GO:0005524|GO:0005886|GO:0006810|GO:0016787|GO:0016887|GO:0017111	G3DSA:3.40.50.300|PF00005|PS00211|PS50893|PS51291|PTHR24220|PTHR24220:SF27|SM00382|SSF52540
ssuC|ssuC|AP_001564.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000515	Binding-protein-dependent transport systems inner membrane component	GO:0005215|GO:0006810|GO:0016020	G3DSA:1.10.3720.10|PF00528|PS50928|PTHR30151|PTHR30151:SF0|SSF161098
ssuD|ssuD|AP_001565.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR011251|IPR019911	Alkanesulphonate monooxygenase, FMN-dependent|Luciferase-like domain	GO:0008726|GO:0016705|GO:0055114	G3DSA:3.20.20.30|MF_01229|PF00296|PTHR30011|PTHR30011:SF1|SSF51679|TIGR03565
ssuE|ssuE|AP_001567.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR005025|IPR020048	NADPH-dependent FMN reductase|NADPH-dependent FMN reductase, SsuE	GO:0008752|GO:0046306|GO:0055114	G3DSA:3.40.50.360|PF03358|SSF52218|TIGR03567
stfQ|stfQ|AP_002168.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR005003|IPR011083	Bacteriophage lambda, Stf, side tail fibre-repeat-1|Phage tail collar domain	GO:0005198	G3DSA:3.90.1340.10|PF03335|PF07484|SSF88874
stfR|stfR|AP_001998.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR005003|IPR008969|IPR011083|IPR013609|IPR014766	Bacteriophage 933W, L0121, tail fibre, N-terminal|Bacteriophage lambda, Stf, side tail fibre-repeat-1|Carboxypeptidase, regulatory domain|Carboxypeptidase-like, regulatory domain|Phage tail collar domain	GO:0005198	G3DSA:2.60.40.1120|G3DSA:3.90.1340.10|PF03335|PF07484|PF08400|SSF49464|SSF88874
sthA|sthA|AP_003848.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001327|IPR004099|IPR013027|IPR016156|IPR022962|IPR023753	FAD-dependent pyridine nucleotide-disulphide oxidoreductase|FAD/NAD-linked reductase, dimerisation|Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain|Pyridine nucleotide-disulphide oxidoreductase, NAD-binding domain|Pyridine nucleotide-disulphide oxidoreductase, dimerisation|Soluble pyridine nucleotide transhydrogenase	GO:0003957|GO:0005737|GO:0016491|GO:0045454|GO:0050660|GO:0055114	G3DSA:3.30.390.30|G3DSA:3.50.50.60|MF_00247|PF00070|PF02852|PF07992|PR00368|PR00411|PTHR22912|PTHR22912:SF19|SSF51905|SSF55424
stpA|stpA|AP_003242.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001801|IPR027444|IPR027454	Histone-like protein H-NS|Histone-like protein H-NS family, oligomerisation domain|Histone-like protein H-NS, C-terminal domain	GO:0003677|GO:0005622|GO:0006355|GO:0046983	G3DSA:1.10.287.1050|G3DSA:4.10.430.10|PF00816|PIRSF002096|SM00528|SSF81273
sucA|sucA|AP_001363.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001017|IPR005475|IPR011603	2-oxoglutarate dehydrogenase, E1 component|Dehydrogenase, E1 component|Transketolase-like, pyrimidine-binding domain	GO:0004591|GO:0006099|GO:0008152|GO:0016624|GO:0030976|GO:0055114	G3DSA:3.40.50.970|PF00676|PF02779|PIRSF000157|PTHR23152|PTHR23152:SF0|SM00861|SSF52518|TIGR00239
sucB|sucB|AP_001364.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000089|IPR001078|IPR003016|IPR004167|IPR006255|IPR011053|IPR023213	2-oxo acid dehydrogenase, lipoyl-binding site|2-oxoacid dehydrogenase acyltransferase, catalytic domain|Biotin/lipoyl attachment|Chloramphenicol acetyltransferase-like domain|Dihydrolipoamide succinyltransferase|E3 binding|Single hybrid motif	GO:0004149|GO:0006099|GO:0008152|GO:0016746|GO:0045252	G3DSA:2.40.50.100|G3DSA:3.30.559.10|G3DSA:4.10.320.10|PF00198|PF00364|PF02817|PS00189|PS50968|PTHR23151|SSF47005|SSF51230|SSF52777|TIGR01347
sucC|sucC|AP_001365.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR005809|IPR005811|IPR011761|IPR013650|IPR013815|IPR013816|IPR016102|IPR017866	ATP-citrate lyase/succinyl-CoA ligase|ATP-grasp fold|ATP-grasp fold, subdomain 1|ATP-grasp fold, subdomain 2|ATP-grasp fold, succinyl-CoA synthetase-type|Succinyl-CoA synthetase, beta subunit|Succinyl-CoA synthetase, beta subunit, conserved site|Succinyl-CoA synthetase-like	GO:0003824|GO:0005524|GO:0008152|GO:0046872	G3DSA:3.30.1490.20|G3DSA:3.30.470.20|G3DSA:3.40.50.261|MF_00558|PF00549|PF08442|PIRSF001554|PS01217|PS50975|PTHR11815|PTHR11815:SF0|SSF52210|SSF56059|TIGR01016
sucD|sucD|AP_001366.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003781|IPR005810|IPR005811|IPR016040|IPR016102|IPR017440	ATP-citrate lyase/succinyl-CoA ligase|ATP-citrate lyase/succinyl-CoA ligase, active site|CoA-binding|NAD(P)-binding domain|Succinyl-CoA ligase, alpha subunit|Succinyl-CoA synthetase-like	GO:0003824|GO:0003878|GO:0004775|GO:0008152|GO:0048037	G3DSA:3.40.50.261|G3DSA:3.40.50.720|PF00549|PF02629|PIRSF001553|PR01798|PS00399|PS01216|PTHR11117|PTHR11117:SF0|SM00881|SSF51735|SSF52210|TIGR01019
sufA|sufA|AP_002304.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000361|IPR011298|IPR016092	FeS cluster biogenesis|FeS cluster insertion protein|SUF system FeS cluster assembly, SufA scaffold	GO:0005198|GO:0016226|GO:0051536	G3DSA:2.60.300.12|PF01521|PTHR10072|PTHR10072:SF34|SSF89360|TIGR00049|TIGR01997
sufB|sufB|AP_002303.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000825|IPR010231	SUF system FeS cluster assembly, SufB|SUF system FeS cluster assembly, SufBD	GO:0016226	PF01458|PTHR30508|PTHR30508:SF1|SSF101960|TIGR01980
sufC|sufC|AP_002302.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003439|IPR003593|IPR010230|IPR017871|IPR027417	AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|FeS cluster assembly SUF system, ATPase SufC|P-loop containing nucleoside triphosphate hydrolase	GO:0000166|GO:0005524|GO:0006810|GO:0016887|GO:0017111	G3DSA:3.40.50.300|PF00005|PS00211|PS50893|PTHR24220|PTHR24220:SF85|SM00382|SSF52540|TIGR01978
sufD|sufD|AP_002301.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000825|IPR011542	SUF system FeS cluster assembly, SufBD|SUF system FeS cluster assembly, SufD	GO:0016226	PF01458|PTHR30508|PTHR30508:SF0|SSF101960|TIGR01981
sufE|sufE|AP_002299.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003808|IPR023939	Cysteine desulfuration protein SufE|Fe-S metabolism associated domain, SufE-like	GO:0006790|GO:0016226	G3DSA:3.90.1010.10|MF_01832|PF02657|SSF82649
sufI|sufI|AP_003567.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001117|IPR006311|IPR008972|IPR011706|IPR011707|IPR019546|IPR026589	Cell division protein FtsP|Cupredoxin|Multicopper oxidase, type 1|Multicopper oxidase, type 2|Multicopper oxidase, type 3|Twin-arginine translocation pathway, signal sequence|Twin-arginine translocation pathway, signal sequence, bacterial/archaeal	GO:0005507|GO:0016491|GO:0043093|GO:0055114	G3DSA:2.60.40.420|MF_00915|PF00394|PF07731|PF07732|PS51318|PTHR11709|PTHR11709:SF2|SSF49503|TIGR01409
sufS|sufS|AP_002300.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000192|IPR010970|IPR015421|IPR015422|IPR015424|IPR020578	Aminotransferase class-V pyridoxal-phosphate binding site|Aminotransferase, class V/Cysteine desulfurase|Cysteine desulfurase, SufS|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2	GO:0003824|GO:0006534|GO:0008152|GO:0030170|GO:0031071	G3DSA:3.40.640.10|G3DSA:3.90.1150.10|MF_01831|PF00266|PS00595|PTHR11601|SSF53383|TIGR01979
sugE|sugE|AP_004651.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000390	Small multidrug resistance protein family	GO:0016021	PF00893|PTHR30561|PTHR30561:SF0|SSF103481
suhB|suhB|AP_003119.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000760|IPR020550|IPR020583|IPR022337	Inositol monophosphatase|Inositol monophosphatase, SuhB|Inositol monophosphatase, conserved site|Inositol monophosphatase, metal-binding site	GO:0008934|GO:0046854|GO:0046855	G3DSA:3.30.540.10|G3DSA:3.40.190.80|PF00459|PR00377|PR01959|PS00629|PS00630|PTHR20854|PTHR20854:SF4|SSF56655
sulA|sulA|AP_001588.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004596|IPR027417	Cell division suppressor protein, SulA|P-loop containing nucleoside triphosphate hydrolase	GO:0009276|GO:0009432|GO:0051782	G3DSA:3.40.50.300|MF_01179|PF03846|PIRSF003093|SSF52540|TIGR00623
surA|surA|AP_000717.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000297|IPR015391|IPR023034|IPR023058|IPR027304	Peptidyl-prolyl cis-trans isomerase, PpiC-type|Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site|Peptidyl-prolyl isomerase SurA|SurA N-terminal|Trigger factor/SurA domain	GO:0003755|GO:0006457|GO:0016853|GO:0030288|GO:0042277|GO:0042710|GO:0043165|GO:0050821|GO:0051082|GO:0051085|GO:0060274	G3DSA:3.10.50.40|MF_01183|PF00639|PF09312|PS01096|PS50198|PTHR10657|PTHR10657:SF0|SSF109998|SSF54534
surE|surE|AP_003311.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002828	Survival protein SurE-like phosphatase/nucleotidase	GO:0016787	G3DSA:3.40.1210.10|PF01975|PTHR30457|PTHR30457:SF0|SSF64167|TIGR00087
syd|syd|AP_003359.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR009948	Syd	GO:0009898	MF_01104|PF07348
tadA|tadA|AP_003145.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002125|IPR016192|IPR016193	APOBEC/CMP deaminase, zinc-binding|CMP/dCMP deaminase, zinc-binding|Cytidine deaminase-like	GO:0003824|GO:0008270|GO:0016787	G3DSA:3.40.140.10|PF00383|PS00903|PTHR11079|PTHR11079:SF9|SSF53927
tag|tag|AP_004245.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004597|IPR005019|IPR011257	DNA glycosylase|DNA-3-methyladenine glycosylase I|Methyladenine glycosylase	GO:0003824|GO:0006281|GO:0006284|GO:0008725	G3DSA:1.10.340.30|PF03352|PTHR30037|PTHR30037:SF0|SSF48150|TIGR00624
talA|talA|AP_003049.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001585|IPR004730|IPR013785|IPR018225	Aldolase-type TIM barrel|Transaldolase|Transaldolase type 1|Transaldolase, active site	GO:0003824|GO:0004801|GO:0005737|GO:0005975|GO:0006098	G3DSA:3.20.20.70|MF_00492|PF00923|PS00958|PS01054|PTHR10683|SSF51569|TIGR00874
talB|talB|AP_000672.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001585|IPR004730|IPR013785|IPR018225	Aldolase-type TIM barrel|Transaldolase|Transaldolase type 1|Transaldolase, active site	GO:0003824|GO:0004801|GO:0005737|GO:0005975|GO:0006098	G3DSA:3.20.20.70|MF_00492|PF00923|PS00958|PS01054|PTHR10683|SSF51569|TIGR00874
tam|tam|AP_002140.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR023149|IPR023506	Trans-aconitate 2-methyltransferase|Trans-aconitate 2-methyltransferase, C-terminal	GO:0030798	G3DSA:1.10.150.290|G3DSA:3.40.50.150|MF_00560|PF13489|PTHR10108|PTHR10108:SF65|SSF53335
tap|tap|AP_002505.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003122|IPR003660|IPR004089|IPR004090|IPR004091	Chemotaxis methyl-accepting receptor|Chemotaxis methyl-accepting receptor, ligand-binding|Chemotaxis methyl-accepting receptor, methyl-accepting site|HAMP linker domain|Methyl-accepting chemotaxis protein (MCP) signalling domain	GO:0004871|GO:0004888|GO:0006935|GO:0007165|GO:0016020|GO:0016021	G3DSA:1.10.287.950|G3DSA:1.20.120.30|PF00015|PF00672|PF02203|PR00260|PS00538|PS50111|PS50885|PTHR32089|PTHR32089:SF20|SM00283|SM00304|SM00319|SSF47170|SSF58104
tar|tar|AP_002506.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003122|IPR003660|IPR004089|IPR004090|IPR004091	Chemotaxis methyl-accepting receptor|Chemotaxis methyl-accepting receptor, ligand-binding|Chemotaxis methyl-accepting receptor, methyl-accepting site|HAMP linker domain|Methyl-accepting chemotaxis protein (MCP) signalling domain	GO:0004871|GO:0004888|GO:0006935|GO:0007165|GO:0016020|GO:0016021	G3DSA:1.10.287.950|G3DSA:1.20.120.30|PF00015|PF00672|PF02203|PR00260|PS00538|PS50111|PS50885|PTHR32089|PTHR32089:SF24|SM00283|SM00304|SM00319|SSF47170|SSF58104
tas|tas|AP_003397.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001395|IPR020471|IPR023210	Aldo/keto reductase|Aldo/keto reductase subgroup|NADP-dependent oxidoreductase domain	GO:0016491|GO:0055114	G3DSA:3.20.20.100|PF00248|PR00069|PTHR11732|PTHR11732:SF112|SSF51430
tatA|tatA|AP_003964.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003369|IPR006312	Sec-independent protein translocase protein TatA/B/E|Sec-independent protein translocase protein TatA/E	GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021	MF_00236|PF02416|TIGR01411
tatB|tatB|AP_003963.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003998|IPR018448	Twin-arginine translocation protein TatB|Twin-arginine translocation protein TatB-like	GO:0009306|GO:0016020|GO:0043953	MF_00237|PR01506|TIGR01410
tatC|tatC|AP_003962.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002033|IPR019820	Sec-independent periplasmic protein translocase TatC|Sec-independent periplasmic protein translocase, conserved site	GO:0016021	MF_00902|PF00902|PR01840|PS01218|PTHR30371|TIGR00945
tatD|tatD|AP_003961.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001130|IPR018228|IPR024918	Deoxyribonuclease, TatD-related, conserved site|Tat-linked quality control protein TatD|TatD family	GO:0016888	G3DSA:3.20.20.140|MF_00901|PF01026|PIRSF005902|PS01090|PS01091|PTHR10060|SSF51556
tatE|tatE|AP_001276.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003369|IPR006312|IPR024905	Sec-independent protein translocase protein TatA/B/E|Sec-independent protein translocase protein TatA/E|Sec-independent protein translocase protein TatE	GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021	MF_00236|MF_00903|PF02416|TIGR01411
tauA|tauA|AP_001016.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001638|IPR007210|IPR010068	ABC-type glycine betaine transport system, substrate-binding domain|Extracellular solute-binding protein, family 3|Taurine ABC transporter, periplasmic binding protein TauA	GO:0005215|GO:0006810|GO:0015734|GO:0030288|GO:0042597	G3DSA:3.40.190.10|PF04069|PTHR30024|PTHR30024:SF0|SM00062|SSF53850|TIGR01729
tauB|tauB|AP_001017.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003439|IPR003593|IPR015859|IPR017871|IPR027417	AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter, taurine import, TauD|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase	GO:0000166|GO:0005524|GO:0015411|GO:0015734|GO:0016020|GO:0016887|GO:0017111	G3DSA:3.40.50.300|PF00005|PS00211|PS50893|PS51250|PTHR24220|PTHR24220:SF31|SM00382|SSF52540
tauC|tauC|AP_001018.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000515	Binding-protein-dependent transport systems inner membrane component	GO:0005215|GO:0006810|GO:0016020	G3DSA:1.10.3720.10|PF00528|PS50928|PTHR30151|PTHR30151:SF4|SSF161098
tauD|tauD|AP_001019.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003819	Taurine catabolism dioxygenase TauD/TfdA	GO:0016491|GO:0055114	G3DSA:3.60.130.10|PF02668|PTHR30468|PTHR30468:SF0|SSF51197
tbpA|tbpA|AP_000732.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR005948|IPR005967|IPR006061	Bacterial extracellular solute-binding family 1, conserved site|Proteobacterial thiamine ABC transporter, periplasmic binding protein|Thiamine ABC transporter periplasmic binding protein	GO:0005215|GO:0005524|GO:0006810|GO:0015888|GO:0030288|GO:0030975|GO:0048502	G3DSA:3.40.190.10|PF13343|PS01037|PTHR30006|PTHR30006:SF0|SSF53850|TIGR01254|TIGR01276
tdcA|tdcA|AP_003666.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000847|IPR005119|IPR011991	LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain	GO:0003700|GO:0006355	G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PR00039|PS50931|PTHR32389|SSF46785|SSF53850
tdcB|tdcB|AP_003665.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000634|IPR001926|IPR005789	Serine/threonine dehydratase, pyridoxal-phosphate-binding site|Threonine dehydratase, catabolic|Tryptophan synthase beta subunit-like PLP-dependent enzymes superfamily	GO:0004794|GO:0006520|GO:0006567|GO:0030170	G3DSA:3.40.50.1100|PF00291|PS00165|PTHR10314|PTHR10314:SF17|SSF53686|TIGR01127
tdcC|tdcC|AP_003664.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004694|IPR018227|IPR023726	Hydroxy amino acid transporter|Threonine/serine transporter TdcC|Tryptophan/tyrosine permease	GO:0005215|GO:0006810|GO:0015565|GO:0015826|GO:0016021|GO:0022889|GO:0032329	MF_01583|PF03222|TIGR00814
tdcD|tdcD|AP_003663.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000890|IPR004372|IPR023865|IPR024917	Acetate/Proprionate kinase|Aliphatic acid kinase, short-chain|Aliphatic acid kinase, short-chain, conserved site|Propionate kinase	GO:0005622|GO:0006082|GO:0008152|GO:0016301|GO:0016310|GO:0016774	G3DSA:3.30.420.40|MF_00020|MF_01881|PF00871|PIRSF000722|PR00471|PS01075|PS01076|PTHR21060|PTHR21060:SF9|SSF53067|TIGR00016
tdcE|tdcE|AP_003661.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001150|IPR004184|IPR005949|IPR019777	Formate C-acetyltransferase glycine radical, conserved site|Formate acetyltransferase|Glycine radical domain|Pyruvate formate lyase domain	GO:0003824|GO:0005737|GO:0005975|GO:0008152|GO:0008861	G3DSA:3.20.70.20|PF01228|PF02901|PIRSF000379|PS00850|PS51149|PS51554|PTHR30191|PTHR30191:SF0|SSF51998|TIGR01255
tdcF|tdcF|AP_003660.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR006056|IPR006175|IPR013813|IPR019897	Enamine/imine deaminase YjgF-like|Endoribonuclease L-PSP/chorismate mutase-like|YjgF-like protein, conserved site|YjgF/Yer057p/UK114 family	GO:0019239	G3DSA:3.30.1330.40|PF01042|PS01094|PTHR11803|SSF55298|TIGR00004
tdcG|tdcG|AP_003659.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004644|IPR005130|IPR005131	Iron-sulphur-dependent L-serine dehydratase single chain form|Serine dehydratase beta chain|Serine dehydratase-like, alpha subunit	GO:0003941|GO:0006094|GO:0051539	G3DSA:3.30.1330.90|PF03313|PF03315|PTHR30182|PTHR30182:SF0|SSF143548|TIGR00720
tdh|tdh|AP_004175.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002085|IPR002328|IPR004627|IPR011032|IPR013149|IPR013154|IPR016040	Alcohol dehydrogenase GroES-like|Alcohol dehydrogenase superfamily, zinc-type|Alcohol dehydrogenase, C-terminal|Alcohol dehydrogenase, zinc-type, conserved site|GroES-like|L-threonine 3-dehydrogenase|NAD(P)-binding domain	GO:0006567|GO:0008270|GO:0008743|GO:0016491|GO:0055114	G3DSA:3.40.50.720|G3DSA:3.90.180.10|MF_00627|PF00107|PF08240|PS00059|PTHR11695|PTHR11695:SF285|SSF50129|SSF51735|TIGR00692
tdk|tdk|AP_001864.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001267|IPR020633|IPR020634|IPR027417	P-loop containing nucleoside triphosphate hydrolase|Thymidine kinase|Thymidine kinase, conserved site|Thymidine kinase, subgroup	GO:0004797|GO:0005524|GO:0005737|GO:0006259	G3DSA:3.30.60.20|MF_00124|PF00265|PIRSF035805|PS00603|PTHR11441|SSF52540|SSF57716
tehA|tehA|AP_002052.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004695|IPR011552	C4-dicarboxylate transporter/malic acid transport protein|Tellurite resistance protein TehA/malic acid transport protein	GO:0016021|GO:0055085	PF03595|TIGR00816
tehB|tehB|AP_002053.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004537|IPR015985	Tellurite resistance methyltransferase TehB-like domain|Tellurite resistance methyltransferase, TehB	GO:0005737|GO:0008757|GO:0046690	G3DSA:3.40.50.150|PF03848|PTHR10108|PTHR10108:SF339|SSF53335|TIGR00477
tesA|tesA|AP_001143.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001087|IPR008265|IPR013831	Lipase, GDSL|Lipase, GDSL, active site|SGNH hydrolase-type esterase domain	GO:0006629|GO:0016298|GO:0016787|GO:0016788	G3DSA:3.40.50.1110|PF00657|PS01098|PTHR30383|PTHR30383:SF0|SSF52266
tesB|tesB|AP_001102.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003703|IPR025652	Acyl-CoA thioesterase|Acyl-CoA thioesterase II domain	GO:0006637|GO:0047617	G3DSA:3.10.129.10|PF02551|PTHR11066|PTHR11066:SF10|SSF54637|TIGR00189
tfaE|tfaE|AP_001782.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003458	Bacteriophage T4, Gp38, tail fibre assembly		PF02413
tfaQ|tfaQ|AP_002167.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003458	Bacteriophage T4, Gp38, tail fibre assembly		PF02413
tfaR|tfaR|AP_001999.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003458	Bacteriophage T4, Gp38, tail fibre assembly		PF02413
tgt|tgt|AP_001056.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002616|IPR004803	Queuine tRNA-ribosyltransferase|tRNA-guanine(15) transglycosylase-like	GO:0006400|GO:0008033|GO:0008479|GO:0008616	G3DSA:3.20.20.105|MF_00168|PF01702|PTHR11962|PTHR11962:SF0|SSF51713|TIGR00430|TIGR00449
thiC|thiC|AP_003824.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002817|IPR025747	ThiC-associated domain|Thiamine biosynthesis protein ThiC	GO:0009228|GO:0051536	MF_00089|PF01964|PF13667|PTHR30557|PTHR30557:SF0|TIGR00190
thiD|thiD|AP_002701.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004399|IPR013749	Phosphomethylpyrimidine kinase type-1|Phosphomethylpyrimidine kinase type-2	GO:0008972|GO:0009228	G3DSA:3.40.1190.20|PF08543|PTHR20858|PTHR20858:SF10|SSF53613|TIGR00097
thiE|thiE|AP_003825.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003733|IPR013785|IPR022998	Aldolase-type TIM barrel|Thiamin phosphate synthase superfamily|Thiamine phosphate synthase	GO:0003824|GO:0004789|GO:0009228	G3DSA:3.20.20.70|MF_00097|PF02581|PTHR20857|SSF51391|TIGR00693
thiF|thiF|AP_003826.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000594|IPR007901|IPR009036|IPR012731|IPR016040	MoeZ/MoeB|Molybdenum cofactor biosynthesis, MoeB|NAD(P)-binding domain|Thiazole biosynthesis adenylyltransferase ThiF|UBA/THIF-type NAD/FAD binding fold	GO:0003824	G3DSA:3.40.50.720|PF00899|PF05237|PTHR10953|SSF69572|TIGR02356
thiG|thiG|AP_003828.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR008867|IPR013785	Aldolase-type TIM barrel|Thiazole biosynthesis	GO:0003824|GO:0009228|GO:0036355	G3DSA:3.20.20.70|MF_00443|PF05690|PTHR32298|PTHR32298:SF1|SSF110399
thiH|thiH|AP_003829.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR007197|IPR010722|IPR012726|IPR013785	Aldolase-type TIM barrel|Biotin/thiamin synthesis-associated protein|Radical SAM|Thiazole biosynthesis ThiH	GO:0003824|GO:0005506|GO:0009228|GO:0051186|GO:0051536|GO:0051539	G3DSA:3.20.20.70|PF04055|PF06968|PTHR22976|PTHR22976:SF2|SM00876|SSF102114|TIGR02351
thiI|thiI|AP_001073.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001763|IPR003720|IPR004114|IPR014729|IPR020536|IPR026340	Rhodanese-like domain|Rossmann-like alpha/beta/alpha sandwich fold|THUMP|Thiamine biosynthesis/tRNA sulfurtransferase ThiI|Thiazole biosynthesis domain|Thil, C-terminal domain	GO:0003723|GO:0005737|GO:0009228|GO:0052837	G3DSA:3.40.250.10|G3DSA:3.40.50.620|MF_00021|PF02568|PF02926|PS50206|PS51165|PTHR30057|PTHR30057:SF0|SM00981|SSF143437|SSF52402|SSF52821|TIGR00342|TIGR04271
thiL|thiL|AP_001067.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000728|IPR006283|IPR010918|IPR016188	AIR synthase related protein, N-terminal domain|AIR synthase-related protein, C-terminal domain|PurM, N-terminal-like|Thiamine-monophosphate kinase	GO:0003824|GO:0009030|GO:0009228	G3DSA:3.30.1330.10|G3DSA:3.90.650.10|MF_02128|PF00586|PF02769|PIRSF005303|PTHR30270|PTHR30270:SF0|SSF55326|SSF56042|TIGR01379
thiM|thiM|AP_002702.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000417	Hydroxyethylthiazole kinase	GO:0004417|GO:0009228	G3DSA:3.40.1190.20|PF02110|PIRSF000513|PR01099|PTHR20857|PTHR20857:SF15|SSF53613|TIGR00694
thiP|thiP|AP_000731.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000515|IPR005947	Binding-protein-dependent transport systems inner membrane component|Thiamine ABC transporter, permease protein	GO:0005215|GO:0006810|GO:0015888|GO:0016020|GO:0016021	G3DSA:1.10.3720.10|PF00528|PS50928|PTHR30183|PTHR30183:SF0|SSF161098|TIGR01253
thiQ|thiQ|AP_000730.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003439|IPR003593|IPR005968|IPR027417	AAA+ ATPase domain|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase|Thiamine ABC transporter, ATP-binding protein ThiQ	GO:0000166|GO:0005524|GO:0006810|GO:0016021|GO:0016887|GO:0017111|GO:0042626	G3DSA:3.40.50.300|PF00005|PTHR24220|PTHR24220:SF26|SM00382|SSF52540|TIGR01277
thiS|thiS|AP_003827.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003749|IPR010035|IPR012675|IPR016155	Beta-grasp domain|Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp|ThiS, thiamine-biosynthesis|ThiamineS/Molybdopterin converting factor subunit 1		G3DSA:3.10.20.30|PF02597|SSF54285|TIGR01683
thrA|thrA|AP_000666.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001048|IPR001341|IPR001342|IPR005106|IPR011147|IPR016040	Aspartate kinase domain|Aspartate/glutamate/uridylate kinase|Aspartate/homoserine dehydrogenase, NAD-binding|Bifunctional aspartokinase/homoserine dehydrogenase I|Homoserine dehydrogenase, catalytic|NAD(P)-binding domain	GO:0004072|GO:0004412|GO:0006520|GO:0008652|GO:0009067|GO:0016491|GO:0050661|GO:0055114	G3DSA:3.30.360.10|G3DSA:3.40.1160.10|G3DSA:3.40.50.720|PF00696|PF00742|PF03447|PF13840|PIRSF000727|PTHR21499|PTHR21499:SF1|SSF51735|SSF53633|SSF55021|SSF55347|TIGR00657
thrB|thrB|AP_000667.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000870|IPR006204|IPR013750|IPR014721|IPR020568	GHMP kinase N-terminal domain|GHMP kinase, C-terminal domain|Homoserine kinase|Ribosomal protein S5 domain 2-type fold|Ribosomal protein S5 domain 2-type fold, subgroup	GO:0004413|GO:0005524|GO:0006566	G3DSA:3.30.230.10|G3DSA:3.30.70.890|PF00288|PF08544|PIRSF000676|PR00958|PTHR20861|PTHR20861:SF3|SSF54211|SSF55060|TIGR00191
thrC|thrC|AP_000668.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000634|IPR001926|IPR004450	Serine/threonine dehydratase, pyridoxal-phosphate-binding site|Threonine synthase-like|Tryptophan synthase beta subunit-like PLP-dependent enzymes superfamily	GO:0006520|GO:0030170	G3DSA:3.40.50.1100|G3DSA:3.90.1380.10|PF00291|PS00165|PTHR10314|PTHR10314:SF52|SSF53686|TIGR00260
thrL|thrL|AP_000665.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR011720	Thr operon leader peptide	GO:0009088|GO:0031554|GO:0031556	MF_01907|PF08254|TIGR02077
thrS|thrS|AP_002339.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002314|IPR002320|IPR004095|IPR004154|IPR006195|IPR012675|IPR012676|IPR012947|IPR018163	Aminoacyl-tRNA synthetase, class II|Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain|Anticodon-binding|Beta-grasp domain|TGS|TGS-like|Threonine-tRNA ligase, class IIa|Threonyl/alanyl tRNA synthetase, SAD|Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain	GO:0000166|GO:0004812|GO:0004829|GO:0005524|GO:0005737|GO:0006418|GO:0006435|GO:0016876|GO:0043039	G3DSA:3.10.20.30|G3DSA:3.30.54.20|G3DSA:3.30.930.10|G3DSA:3.30.980.10|G3DSA:3.40.50.800|MF_00184|PF00587|PF02824|PF03129|PF07973|PR01047|PS50862|PTHR11451|PTHR11451:SF5|SM00863|SSF52954|SSF55186|SSF55681|SSF81271|TIGR00418
thyA|thyA|AP_003390.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000398|IPR020940|IPR023451	Thymidylate synthase|Thymidylate synthase, active site|Thymidylate synthase/dCMP hydroxymethylase domain	GO:0004799|GO:0006231	G3DSA:3.30.572.10|MF_00008|PF00303|PR00108|PS00091|PTHR11549|SSF55831|TIGR03284
tiaE|tiaE|AP_004241.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR006139|IPR006140|IPR016040|IPR023756	D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding|D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain|Glyoxylate/hydroxypyruvate reductase B|NAD(P)-binding domain	GO:0008152|GO:0016616|GO:0016618|GO:0030267|GO:0048037|GO:0051287|GO:0055114	G3DSA:3.40.50.720|MF_01667|PF00389|PF02826|PS00670|PS00671|PTHR10996|PTHR10996:SF27|SSF51735|SSF52283
tig|tig|AP_001086.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001179|IPR005215|IPR008880|IPR008881|IPR027304	Peptidyl-prolyl cis-trans isomerase, FKBP-type, domain|Trigger factor|Trigger factor, C-terminal domain|Trigger factor, ribosome-binding, bacterial|Trigger factor/SurA domain	GO:0006457|GO:0015031	G3DSA:1.10.3120.10|G3DSA:3.10.50.40|G3DSA:3.30.70.1050|MF_00303|PF00254|PF05697|PF05698|PIRSF003095|PS50059|PTHR30560|PTHR30560:SF0|SSF102735|SSF109998|SSF54534|TIGR00115
tilS|tilS|AP_000848.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR011063|IPR012094|IPR012795|IPR012796|IPR014729|IPR015262|IPR020825	Lysidine-tRNA(Ile) synthetase|Lysidine-tRNA(Ile) synthetase, C-terminal|Lysidine-tRNA(Ile) synthetase, N-terminal|Lysidine-tRNA(Ile) synthetase, substrate-binding domain|Phenylalanyl-tRNA synthetase, B3/B4|Rossmann-like alpha/beta/alpha sandwich fold|tRNA(Ile)-lysidine/2-thiocytidine synthase	GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879	G3DSA:3.40.50.620|MF_01161|PF01171|PF09179|PF11734|PTHR11807|PTHR11807:SF2|SM00977|SSF52402|SSF56037|SSF82829|TIGR02432|TIGR02433
tktA|tktA|AP_003492.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR005474|IPR005475|IPR005476|IPR005478|IPR009014|IPR015941|IPR020826	Transketolase binding site|Transketolase, C-terminal|Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II|Transketolase, N-terminal|Transketolase, bacterial-like|Transketolase-like, C-terminal|Transketolase-like, pyrimidine-binding domain	GO:0003824|GO:0004802|GO:0008152	G3DSA:3.40.50.920|G3DSA:3.40.50.970|PF00456|PF02779|PF02780|PS00801|PS00802|PTHR11624|PTHR11624:SF1|SM00861|SSF52518|SSF52922|TIGR00232
tktB|tktB|AP_003050.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR005474|IPR005475|IPR005476|IPR005478|IPR009014|IPR015941|IPR020826	Transketolase binding site|Transketolase, C-terminal|Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II|Transketolase, N-terminal|Transketolase, bacterial-like|Transketolase-like, C-terminal|Transketolase-like, pyrimidine-binding domain	GO:0003824|GO:0004802|GO:0008152	G3DSA:3.40.50.920|G3DSA:3.40.50.970|PF00456|PF02779|PF02780|PS00801|PS00802|PTHR11624|PTHR11624:SF1|SM00861|SSF52518|SSF52922|TIGR00232
tldD|tldD|AP_003786.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002510|IPR025502	TldD|TldD/PmbA		PF01523|PIRSF004919|PTHR30624|PTHR30624:SF0|SSF111283
tmk|tmk|AP_001724.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR018094|IPR018095|IPR027417	P-loop containing nucleoside triphosphate hydrolase|Thymidylate kinase|Thymidylate kinase, conserved site	GO:0004798|GO:0005524|GO:0006233	G3DSA:3.40.50.300|MF_00165|PF02223|PS01331|PTHR10344|SSF52540|TIGR00041
tnaA|tnaA|AP_004083.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001597|IPR011166|IPR013440|IPR015421|IPR015422|IPR015424|IPR018176	Aromatic amino acid beta-eliminating lyase/threonine aldolase|Beta-eliminating lyase family|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2|Tryptophanase|Tryptophanase, conserved site	GO:0003824|GO:0006520|GO:0006568|GO:0009034|GO:0009072|GO:0016829|GO:0016830|GO:0030170	G3DSA:3.40.640.10|G3DSA:3.90.1150.10|MF_00544|PF01212|PIRSF001386|PS00853|PTHR32325|PTHR32325:SF1|SSF53383|TIGR02617
tnaB|tnaB|AP_004080.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR018227	Tryptophan/tyrosine permease		PF03222|PTHR32195|PTHR32195:SF4
tnaB|tnaB|AP_004082.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002091|IPR013061|IPR018227	Aromatic amino acid permease|Tryptophan/tryrosine permease, conserved site|Tryptophan/tyrosine permease	GO:0006865|GO:0016020	PF03222|PR00166|PS00594|PTHR32195|PTHR32195:SF4
tnaC|tnaC|AP_004085.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR012620	Tryptophanese operon leader peptide	GO:0031554|GO:0031556	PF08053|TIGR02616
tolA|tolA|AP_001377.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR014161	Tol-Pal system, TolA	GO:0005215|GO:0006810|GO:0016020	G3DSA:3.30.1150.10|PF06519|PTHR23242|SSF74653|TIGR02794
tolB|tolB|AP_001378.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002469|IPR007195|IPR011659|IPR014167|IPR015943	Peptidase S9B, dipeptidylpeptidase IV N-terminal|Tol-Pal system beta propeller repeat-containing protein, TolB|TolB, N-terminal|WD40-like Beta Propeller|WD40/YVTN repeat-like-containing domain	GO:0005515|GO:0006508|GO:0015031|GO:0016020|GO:0017038|GO:0042597	G3DSA:2.130.10.10|G3DSA:3.40.50.10070|MF_00671|PF00930|PF04052|PF07676|PTHR11731|PTHR11731:SF4|SSF52964|SSF69304|TIGR02800
tolC|tolC|AP_003585.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003423|IPR010130	Outer membrane efflux protein|Type I secretion outer membrane protein, TolC	GO:0005215|GO:0006810|GO:0015031|GO:0019867	G3DSA:1.20.1600.10|PF02321|PTHR30026|PTHR30026:SF0|SSF56954|TIGR01844
tolQ|tolQ|AP_001375.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002898|IPR014163	MotA/TolQ/ExbB proton channel|Tol-Pal system, TolQ	GO:0006810|GO:0008565|GO:0015031|GO:0016020|GO:0016021	PF01618|PTHR30625|PTHR30625:SF0|TIGR02796
tolR|tolR|AP_001376.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003400|IPR014168	Biopolymer transport protein ExbD/TolR|Biopolymer transport, TolR	GO:0005215|GO:0006810|GO:0015031|GO:0016020|GO:0016021	PF02472|TIGR02801
tonB|tonB|AP_001878.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003538|IPR006260	Gram-negative bacterial TonB protein|TonB, C-terminal	GO:0005381|GO:0008565|GO:0015031|GO:0016020|GO:0030288|GO:0034755	G3DSA:3.30.1150.10|PF03544|PR01374|SSF74653|TIGR01352
topA|topA|AP_001900.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000380|IPR003601|IPR003602|IPR005733|IPR006171|IPR013263|IPR013497|IPR013498|IPR013824|IPR013825|IPR023405|IPR023406	DNA topoisomerase I, bacterial-type|DNA topoisomerase I, zinc ribbon-like, bacterial-type|DNA topoisomerase, type IA|DNA topoisomerase, type IA, DNA-binding|DNA topoisomerase, type IA, active site|DNA topoisomerase, type IA, central|DNA topoisomerase, type IA, central region, subdomain 1|DNA topoisomerase, type IA, central region, subdomain 2|DNA topoisomerase, type IA, core domain|DNA topoisomerase, type IA, domain 2|DNA topoisomerase, type IA, zn finger|Toprim domain	GO:0003677|GO:0003916|GO:0003917|GO:0003918|GO:0005694|GO:0006265	G3DSA:1.10.460.10|G3DSA:2.20.25.10|G3DSA:2.70.20.10|G3DSA:3.30.65.10|G3DSA:3.40.50.140|PF01131|PF01396|PF01751|PF08272|PR00417|PS00396|PTHR11390|SM00436|SM00437|SM00493|SSF56712|SSF57783|TIGR01051
topB|topB|AP_002382.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000380|IPR003601|IPR003602|IPR005738|IPR006171|IPR013497|IPR013824|IPR013825|IPR023405|IPR023406	DNA topoisomerase III, bacterial-type|DNA topoisomerase, type IA|DNA topoisomerase, type IA, DNA-binding|DNA topoisomerase, type IA, active site|DNA topoisomerase, type IA, central|DNA topoisomerase, type IA, central region, subdomain 1|DNA topoisomerase, type IA, central region, subdomain 2|DNA topoisomerase, type IA, core domain|DNA topoisomerase, type IA, domain 2|Toprim domain	GO:0003677|GO:0003916|GO:0003917|GO:0005694|GO:0006265	G3DSA:1.10.460.10|G3DSA:2.70.20.10|G3DSA:3.40.50.140|PF01131|PF01751|PR00417|PS00396|PTHR11390|SM00436|SM00437|SM00493|SSF56712|TIGR01056
torA|torA|AP_001628.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR006311|IPR006655|IPR006656|IPR006657|IPR006658|IPR009010|IPR011887	Aspartate decarboxylase-like domain|Molybdopterin guanine dinucleotide-containing S/N-oxide reductase|Molybdopterin oxidoreductase|Molybdopterin oxidoreductase, prokaryotic, conserved site|Molydopterin dinucleotide-binding domain|Trimethylamine-N-oxide reductase TorA|Twin-arginine translocation pathway, signal sequence	GO:0009033|GO:0009055|GO:0016491|GO:0030151|GO:0042597|GO:0055114	G3DSA:2.40.40.20|G3DSA:3.40.228.10|G3DSA:3.40.50.740|G3DSA:3.90.55.10|PF00384|PF01568|PS00490|PS00932|PS51318|PTHR11615|PTHR11615:SF19|SSF50692|SSF53706|TIGR00509|TIGR02164
torC|torC|AP_001627.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR005126|IPR009154	Membrane-bound tetrahaem cytochrome TorC/YecK|NapC/NirT cytochrome c, N-terminal	GO:0005506|GO:0009055|GO:0009276|GO:0016021|GO:0020037	G3DSA:1.10.3820.10|PF03264|PIRSF000014|PTHR30333|PTHR30333:SF0|SSF48695|TIGR02162
torD|torD|AP_001629.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR020945|IPR023069	Chaperone TorD|DMSO/Nitrate reductase chaperone		G3DSA:1.10.3480.10|MF_01150|PF02613|SSF89155
torI|torI|AP_002963.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR010260	Bacteriophage P4, Orf88		PF05930
torR|torR|AP_001626.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001789|IPR001867|IPR011006|IPR011991	CheY-like superfamily|Signal transduction response regulator, C-terminal|Signal transduction response regulator, receiver domain|Winged helix-turn-helix DNA-binding domain	GO:0000156|GO:0000160|GO:0003677|GO:0006355	G3DSA:1.10.10.10|G3DSA:3.40.50.2300|PF00072|PF00486|PTHR26402|PTHR26402:SF117|SM00448|SM00862|SSF52172
torS|torS|AP_001624.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001789|IPR003594|IPR003660|IPR003661|IPR004358|IPR005467|IPR008207|IPR009082|IPR011006|IPR014302	CheY-like superfamily|HAMP linker domain|Histidine kinase-like ATPase, ATP-binding domain|Signal transduction histidine kinase, TMAO sensor TorS|Signal transduction histidine kinase, core|Signal transduction histidine kinase, homodimeric domain|Signal transduction histidine kinase, phosphotransfer (Hpt) domain|Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal|Signal transduction response regulator, receiver domain	GO:0000155|GO:0000156|GO:0000160|GO:0004673|GO:0004871|GO:0005524|GO:0006355|GO:0007165|GO:0016020|GO:0016021|GO:0016310|GO:0016772	G3DSA:1.10.287.130|G3DSA:1.20.120.160|G3DSA:3.30.565.10|G3DSA:3.40.50.2300|PF00072|PF00512|PF00672|PF01627|PF02518|PIRSF036437|PR00344|PS50109|PS50110|PS50885|PS50894|PTHR24423|PTHR24423:SF353|SM00073|SM00304|SM00387|SM00388|SM00448|SSF47226|SSF47384|SSF52172|SSF55874|TIGR02956
torT|torT|AP_001625.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001761|IPR014301	Periplasmic binding protein/LacI sugar binding domain|TMAO reductase system periplasmic, TorT		G3DSA:3.40.50.2300|PF00532|SSF53822|TIGR02955
torY|torY|AP_002493.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR005126|IPR009154|IPR011031	Membrane-bound tetrahaem cytochrome TorC/YecK|Multihaem cytochrome|NapC/NirT cytochrome c, N-terminal	GO:0005506|GO:0009055|GO:0009276|GO:0016021|GO:0020037	G3DSA:1.10.3820.10|PF03264|PIRSF000014|PS51008|PTHR30333|PTHR30333:SF0|SSF48695
torZ|torZ|AP_002492.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR006311|IPR006655|IPR006656|IPR006657|IPR006658|IPR009010|IPR019546	Aspartate decarboxylase-like domain|Molybdopterin guanine dinucleotide-containing S/N-oxide reductase|Molybdopterin oxidoreductase|Molybdopterin oxidoreductase, prokaryotic, conserved site|Molydopterin dinucleotide-binding domain|Twin-arginine translocation pathway, signal sequence|Twin-arginine translocation pathway, signal sequence, bacterial/archaeal	GO:0009055|GO:0016491|GO:0030151|GO:0055114	G3DSA:2.40.40.20|G3DSA:3.40.228.10|G3DSA:3.40.50.740|G3DSA:3.90.55.10|PF00384|PF01568|PS00490|PS00932|PS51318|PTHR11615|PTHR11615:SF19|SSF50692|SSF53706|TIGR00509|TIGR01409
tpiA|tpiA|AP_003890.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000652|IPR013785|IPR020861|IPR022896	Aldolase-type TIM barrel|Triosephosphate isomerase|Triosephosphate isomerase, active site|Triosephosphate isomerase, bacterial/eukaryotic	GO:0003824|GO:0004807|GO:0006096|GO:0008152	G3DSA:3.20.20.70|MF_00147_B|PF00121|PS00171|PS51440|PTHR21139|SSF51351|TIGR00419
tpx|tpx|AP_001951.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR012336|IPR013740	Redoxin|Thioredoxin-like fold	GO:0016491	G3DSA:3.40.30.10|PF08534|PTHR10681|PTHR10681:SF57|SSF52833
treA|treA|AP_001822.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001661|IPR008928|IPR018232|IPR023720	Glycoside hydrolase, family 37|Glycoside hydrolase, family 37, conserved site|Six-hairpin glycosidase-like|Trehalase, periplasmic	GO:0003824|GO:0004555|GO:0005991|GO:0005993|GO:0071474	MF_01060|PF01204|PR00744|PS00927|PS00928|PTHR23403|PTHR23403:SF1|SSF48208
treB|treB|AP_004738.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001996|IPR003352|IPR004719|IPR011296|IPR011535|IPR013013|IPR018113	Phosphotransferase system EIIB/cysteine, phosphorylation site|Phosphotransferase system, EIIB component, type 1|Phosphotransferase system, EIIC|Phosphotransferase system, EIIC component, type 1|Phosphotransferase system, glucose-like IIB component|Phosphotransferase system, maltose/glucose-specific IIC component|Phosphotransferase system, trehalose-specific IIBC component	GO:0005351|GO:0006810|GO:0008982|GO:0009401|GO:0015574|GO:0015771|GO:0016020|GO:0016021	G3DSA:3.30.1360.60|PF00367|PF02378|PS01035|PS51098|PS51103|PTHR30175|PTHR30175:SF1|SSF55604|TIGR00826|TIGR00852|TIGR01992
treC|treC|AP_004737.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR006047|IPR006589|IPR012769|IPR013780|IPR013781|IPR015902|IPR017853|IPR022567	Alpha,alpha-phosphotrehalase|Domain of unknown function DUF3459|Glycoside hydrolase, catalytic domain|Glycoside hydrolase, family 13|Glycoside hydrolase, superfamily|Glycosyl hydrolase, family 13, all-beta|Glycosyl hydrolase, family 13, catalytic domain|Glycosyl hydrolase, family 13, subfamily, catalytic domain	GO:0003824|GO:0005737|GO:0005975|GO:0005993|GO:0008788|GO:0043169	G3DSA:2.60.40.1180|G3DSA:3.20.20.80|G3DSA:3.90.400.10|PF00128|PF11941|PTHR10357|PTHR10357:SF11|SM00642|SSF51011|SSF51445|TIGR02403
treF|treF|AP_004274.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001661|IPR008928|IPR018232|IPR023715	Glycoside hydrolase, family 37|Glycoside hydrolase, family 37, conserved site|Six-hairpin glycosidase-like|Trehalase, cytoplasmic	GO:0003824|GO:0004555|GO:0005991|GO:0005993|GO:0071474	MF_01059|PF01204|PR00744|PS00927|PS00928|PTHR23403|PTHR23403:SF1|SSF48208
treR|treR|AP_004739.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000843|IPR010982|IPR012771	Lambda repressor-like, DNA-binding domain|Transcription regulator HTH, LacI|Trehalose operon repressor	GO:0003677|GO:0003700|GO:0005622|GO:0005991|GO:0006355|GO:0045892	G3DSA:1.10.260.40|G3DSA:3.40.50.2300|PF00356|PF13377|PR00036|PS00356|PS50932|PTHR30146|SM00354|SSF47413|SSF53822|TIGR02405
trg|trg|AP_002045.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003122|IPR003660|IPR004089|IPR004090|IPR004091	Chemotaxis methyl-accepting receptor|Chemotaxis methyl-accepting receptor, ligand-binding|Chemotaxis methyl-accepting receptor, methyl-accepting site|HAMP linker domain|Methyl-accepting chemotaxis protein (MCP) signalling domain	GO:0004871|GO:0004888|GO:0006935|GO:0007165|GO:0016020|GO:0016021	G3DSA:1.10.287.950|G3DSA:1.20.120.30|PF00015|PF00672|PF02203|PR00260|PS00538|PS50111|PS50885|PTHR32089|PTHR32089:SF23|SM00283|SM00304|SM00319|SSF47170|SSF58104
trkA|trkA|AP_004501.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003148|IPR006036|IPR006037|IPR016040	NAD(P)-binding domain|Potassium uptake protein TrkA|Regulator of K+ conductance, C-terminal|Regulator of K+ conductance, N-terminal	GO:0005886|GO:0006813|GO:0008324|GO:0015079	G3DSA:3.40.50.720|PF02080|PF02254|PR00335|PS51201|PS51202|PTHR13789|PTHR13789:SF90|SSF116726|SSF51735
trkD|trkD|AP_004040.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003855|IPR023051	K+ potassium transporter|Potassium uptake protein, low affinity, Kup	GO:0015079|GO:0016020|GO:0071805	MF_01522|PF02705|PTHR30540|PTHR30540:SF0|TIGR00794
trkG|trkG|AP_001993.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003445|IPR004772	Cation transporter|Potassium uptake protein TrkH family	GO:0006812|GO:0008324|GO:0016021|GO:0022820|GO:0055085|GO:0071805	PF02386|PIRSF006247|PTHR32024|TIGR00933
trkH|trkH|AP_003953.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003445|IPR004772	Cation transporter|Potassium uptake protein TrkH family	GO:0006812|GO:0008324|GO:0016021|GO:0022820|GO:0055085|GO:0071805	PF02386|PIRSF006247|PTHR32024|TIGR00933
trmA|trmA|AP_003845.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR010280|IPR011869	(Uracil-5)-methyltransferase|tRNA (uracil(54)-C(5))-methyltransferase,TrmA,  proteobacteria	GO:0006396|GO:0008033|GO:0008173|GO:0030697	G3DSA:3.40.50.150|MF_01011|PF05958|PS01230|PS01231|PTHR11061|PTHR11061:SF14|SSF53335|TIGR02143
trmC|trmC|AP_002924.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR006076|IPR008471|IPR017610|IPR023032	FAD dependent oxidoreductase|MnmC-like methyltransferase|tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC|tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal	GO:0004808|GO:0008033|GO:0008168|GO:0016491|GO:0016645|GO:0055114	G3DSA:3.40.50.150|G3DSA:3.50.50.60|MF_01102|PF01266|PF05430|PTHR13847|PTHR13847:SF78|SSF51905|TIGR03197
trmD|trmD|AP_003188.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002649|IPR016009|IPR023148	tRNA (guanine-N1-)-methyltransferase|tRNA (guanine-N1-)-methyltransferase, C-terminal|tRNA (guanine-N1-)-methyltransferase, bacteria	GO:0003723|GO:0008033|GO:0009019	G3DSA:1.10.1270.20|G3DSA:3.40.1280.10|MF_00605|PF01746|PIRSF000386|PTHR32125|PTHR32125:SF1|SSF75217|TIGR00088
trmE|trmE|AP_004086.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004520|IPR005225|IPR006073|IPR018948|IPR025867|IPR027266|IPR027368|IPR027417	GTP binding domain|GTP-binding protein TrmE, N-terminal|GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1|P-loop containing nucleoside triphosphate hydrolase|Small GTP-binding protein domain|tRNA modification GTPase MnmE|tRNA modification GTPase MnmE C-terminal domain|tRNA modification GTPase MnmE domain 2	GO:0003924|GO:0005515|GO:0005525|GO:0005622|GO:0006184|GO:0006400	G3DSA:1.20.120.430|G3DSA:3.30.1360.120|G3DSA:3.40.50.300|MF_00379|PF01926|PF10396|PF12631|PTHR11649|PTHR11649:SF34|SSF116878|SSF52540|TIGR00231|TIGR00450
trmH|trmH|AP_004141.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001537|IPR022724	RNA methyltransferase, SpoU/TrmH type, C-terminal|tRNA/rRNA methyltransferase, SpoU	GO:0003723|GO:0006396|GO:0008173|GO:0009020	G3DSA:3.40.1280.10|PF00588|PF12105|PTHR12029|PTHR12029:SF22|SSF75217
trmU|trmU|AP_001759.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004506|IPR014729|IPR023382	Adenine nucleotide alpha hydrolase-like domains|Rossmann-like alpha/beta/alpha sandwich fold|tRNA-specific 2-thiouridylase	GO:0005737|GO:0008033|GO:0016740|GO:0016783	G3DSA:2.30.30.280|G3DSA:2.40.30.10|G3DSA:3.40.50.620|MF_00144|PF03054|PTHR11933|SSF52402|TIGR00420
trpA|trpA|AP_001886.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002028|IPR011060|IPR013785|IPR018204	Aldolase-type TIM barrel|Ribulose-phosphate binding barrel|Tryptophan synthase, alpha chain|Tryptophan synthase, alpha chain, active site	GO:0003824|GO:0004834|GO:0006568|GO:0008152	G3DSA:3.20.20.70|MF_00131|PF00290|PS00167|PTHR10314|PTHR10314:SF28|SSF51366|TIGR00262
trpB|trpB|AP_001887.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001926|IPR006653|IPR006654|IPR023026	Tryptophan synthase beta chain/beta chain-like|Tryptophan synthase beta subunit-like PLP-dependent enzymes superfamily|Tryptophan synthase, beta chain|Tryptophan synthase, beta chain, conserved site	GO:0000162|GO:0004834|GO:0006568	G3DSA:3.40.50.1100|MF_00133|PF00291|PIRSF001413|PS00168|PTHR10314|PTHR10314:SF3|SSF53686|TIGR00263
trpC|trpC|AP_001888.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001240|IPR001468|IPR011060|IPR013785|IPR013798	Aldolase-type TIM barrel|Indole-3-glycerol phosphate synthase|Indole-3-glycerol phosphate synthase, conserved site|N-(5'phosphoribosyl) anthranilate isomerase (PRAI) like domain|Ribulose-phosphate binding barrel	GO:0003824|GO:0004425|GO:0004640|GO:0006568|GO:0008152	G3DSA:3.20.20.70|MF_00134_B|MF_00135|PF00218|PF00697|PS00614|PTHR22854|PTHR22854:SF5|SSF51366
trpD|trpD|AP_001889.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000312|IPR005940|IPR006221|IPR017459|IPR017926	Anthranilate phosphoribosyl transferase|Anthranilate synthase/para-aminobenzoate synthase like domain|Glutamine amidotransferase|Glycosyl transferase family 3, N-terminal domain|Glycosyl transferase, family 3	GO:0000162|GO:0004048|GO:0008152|GO:0016757	G3DSA:1.20.970.10|G3DSA:3.40.1030.10|G3DSA:3.40.50.880|MF_00211|PF00117|PF00591|PF02885|PR00096|PR00097|PR00099|PS51273|PTHR11922|PTHR11922:SF7|SSF47648|SSF52317|SSF52418|TIGR00566|TIGR01245
trpE|trpE|AP_001890.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR005257|IPR005801|IPR006805|IPR015890|IPR019999	ADC synthase|Anthranilate synthase component I|Anthranilate synthase component I, N-terminal|Anthranilate synthase component I, TrpE-like, bacterial|Chorismate binding, C-terminal	GO:0004049|GO:0009058|GO:0016833	G3DSA:3.60.120.10|PF00425|PF04715|PIRSF001373|PR00095|PTHR11236|PTHR11236:SF9|SSF56322|TIGR00565
trpL|trpL|AP_001891.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR013205	Leader peptide, tryptophan-operon		PF08255
trpR|trpR|AP_004881.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000831|IPR010921|IPR013335	Trp repressor|Trp repressor, bacterial|Trp repressor/replication initiator	GO:0003700|GO:0005622|GO:0006355|GO:0043565	G3DSA:1.10.1270.10|MF_00475|PD012582|PF01371|PIRSF003196|SSF48295|TIGR01321
trpS|trpS|AP_004406.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001412|IPR002305|IPR002306|IPR014729|IPR024109	Aminoacyl-tRNA synthetase, class I, conserved site|Aminoacyl-tRNA synthetase, class Ic|Rossmann-like alpha/beta/alpha sandwich fold|Tryptophan-tRNA ligase|Tryptophan-tRNA ligase, bacterial-type	GO:0000166|GO:0004812|GO:0004830|GO:0005524|GO:0005737|GO:0006418|GO:0006436	G3DSA:1.10.240.10|G3DSA:3.40.50.620|MF_00140_B|PF00579|PR01039|PS00178|PTHR10055|PTHR10055:SF0|SSF52374|TIGR00233
truA|truA|AP_002918.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001406|IPR020094|IPR020095|IPR020097|IPR020103	Pseudouridine synthase I, TruA|Pseudouridine synthase I, TruA, C-terminal|Pseudouridine synthase I, TruA, N-terminal|Pseudouridine synthase I, TruA, alpha/beta domain|Pseudouridine synthase, catalytic domain	GO:0001522|GO:0003723|GO:0009451|GO:0009982	G3DSA:3.30.70.580|G3DSA:3.30.70.660|MF_00171|PF01416|PIRSF001430|PTHR11142|SSF55120|TIGR00071
truB|truB|AP_003711.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002501|IPR014780|IPR015240|IPR015947|IPR020103	PUA-like domain|Pseudouridine synthase II|Pseudouridine synthase, catalytic domain|tRNA pseudouridine synthase II, TruB|tRNA pseudouridine synthase II, TruB, subfamily 1, C-terminal	GO:0001522|GO:0003723|GO:0006396|GO:0009451|GO:0009982	G3DSA:2.30.130.10|MF_01080|PF01509|PF09157|PTHR13767|PTHR13767:SF2|SSF55120|SSF88697|TIGR00431
truD|truD|AP_003312.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001656|IPR011760|IPR020103|IPR020119	Pseudouridine synthase TruD, conserved site|Pseudouridine synthase, TruD|Pseudouridine synthase, TruD, insertion domain|Pseudouridine synthase, catalytic domain	GO:0001522|GO:0003723|GO:0009451|GO:0009982	MF_01082|PF01142|PS01268|PS50984|PTHR13326|SSF55120|TIGR00094
trxA|trxA|AP_004016.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR005746|IPR012336|IPR013766|IPR017937	Thioredoxin|Thioredoxin domain|Thioredoxin, conserved site|Thioredoxin-like fold	GO:0006662|GO:0009055|GO:0015035|GO:0045454	G3DSA:3.40.30.10|PF00085|PIRSF000077|PR00421|PS00194|PS51352|PTHR10438|PTHR10438:SF79|SSF52833|TIGR01068
trxB|trxB|AP_001518.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000103|IPR001327|IPR005982|IPR008255|IPR013027|IPR023753	FAD-dependent pyridine nucleotide-disulphide oxidoreductase|Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain|Pyridine nucleotide-disulphide oxidoreductase, NAD-binding domain|Pyridine nucleotide-disulphide oxidoreductase, class-II|Pyridine nucleotide-disulphide oxidoreductase, class-II, active site|Thioredoxin reductase	GO:0004791|GO:0005737|GO:0016491|GO:0019430|GO:0050660|GO:0055114	G3DSA:3.50.50.60|PF00070|PF07992|PR00368|PR00469|PS00573|PTHR22912|PTHR22912:SF48|SSF51905|TIGR01292
trxC|trxC|AP_003168.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR005746|IPR012336|IPR013766|IPR017937	Thioredoxin|Thioredoxin domain|Thioredoxin, conserved site|Thioredoxin-like fold	GO:0006662|GO:0009055|GO:0015035|GO:0045454	G3DSA:3.40.30.10|PF00085|PIRSF000077|PR00421|PS00194|PS51352|PTHR10438|PTHR10438:SF95|SSF52833|TIGR01068
tsf|tsf|AP_000830.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000449|IPR001816|IPR009060|IPR014039|IPR018101	Translation elongation factor EFTs/EF1B|Translation elongation factor EFTs/EF1B, dimerisation|Translation elongation factor Ts, conserved site|UBA-like|Ubiquitin-associated/translation elongation factor EF1B, N-terminal	GO:0003746|GO:0005515|GO:0005622|GO:0006414	G3DSA:1.10.286.20|G3DSA:1.10.8.10|G3DSA:3.30.479.20|MF_00050|PF00627|PF00889|PS01126|PS01127|PTHR11741|PTHR11741:SF0|SSF46934|SSF54713|TIGR00116
tsgA|tsgA|AP_004425.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR011701|IPR016196	Major facilitator superfamily|Major facilitator superfamily domain, general substrate transporter	GO:0016021|GO:0055085	G3DSA:1.20.1250.20|PF07690|PTHR24003|SSF103473
tsr|tsr|AP_004844.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003122|IPR003660|IPR004089|IPR004090|IPR004091	Chemotaxis methyl-accepting receptor|Chemotaxis methyl-accepting receptor, ligand-binding|Chemotaxis methyl-accepting receptor, methyl-accepting site|HAMP linker domain|Methyl-accepting chemotaxis protein (MCP) signalling domain	GO:0004871|GO:0004888|GO:0006935|GO:0007165|GO:0016020|GO:0016021	G3DSA:1.10.287.950|G3DSA:1.20.120.30|PF00015|PF00672|PF02203|PR00260|PS00538|PS50111|PS50885|PTHR32089|PTHR32089:SF21|SM00283|SM00304|SM00319|SSF47170|SSF58104
tsx|tsx|AP_001061.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003055|IPR018013	Nucleoside-specific channel-forming protein, Tsx|Nucleoside-specific channel-forming protein, Tsx-like	GO:0005337|GO:0009279	G3DSA:2.40.230.20|PF03502|PR01277|SSF111364
ttdA|ttdA|AP_003611.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004646	Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain	GO:0016829	PF05681|PTHR30389|PTHR30389:SF1|TIGR00722
ttdB|ttdB|AP_003612.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004647	Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain	GO:0016836	G3DSA:3.20.130.10|PF05683|PTHR30389|PTHR30389:SF1|SSF117457|TIGR00723
ttk|ttk|AP_004150.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001647|IPR009057|IPR011075|IPR015893|IPR023769|IPR023772	DNA-binding HTH domain, TetR-type|DNA-binding HTH domain, TetR-type, conserved site|Homeodomain-like|Nucleoid occlusion factor SlmA|Tetracycline transcriptional regulator, TetR-like, C-terminal|Tetracycline transcriptional regulator, TetR-related, C-terminal	GO:0003677|GO:0010974	G3DSA:1.10.357.10|MF_01839|PF00440|PS01081|PS50977|SSF46689|SSF48498
tufA|tufA|AP_004451.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000795|IPR004160|IPR004161|IPR004541|IPR005225|IPR009000|IPR009001|IPR027417	Elongation factor, GTP-binding domain|P-loop containing nucleoside triphosphate hydrolase|Small GTP-binding protein domain|Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal|Translation elongation factor EFTu/EF1A, C-terminal|Translation elongation factor EFTu/EF1A, bacterial/organelle|Translation elongation factor EFTu/EF1A, domain 2|Translation elongation/initiation factor/Ribosomal, beta-barrel	GO:0003746|GO:0003924|GO:0005525|GO:0005622|GO:0006414	G3DSA:2.40.30.10|G3DSA:3.40.50.300|MF_00118_B|PF00009|PF03143|PF03144|PR00315|PS00301|PTHR23115|PTHR23115:SF44|SSF50447|SSF50465|SSF52540|TIGR00231|TIGR00485
tufB|tufB|AP_003839.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000795|IPR004160|IPR004161|IPR004541|IPR005225|IPR009000|IPR009001|IPR027417	Elongation factor, GTP-binding domain|P-loop containing nucleoside triphosphate hydrolase|Small GTP-binding protein domain|Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal|Translation elongation factor EFTu/EF1A, C-terminal|Translation elongation factor EFTu/EF1A, bacterial/organelle|Translation elongation factor EFTu/EF1A, domain 2|Translation elongation/initiation factor/Ribosomal, beta-barrel	GO:0003746|GO:0003924|GO:0005525|GO:0005622|GO:0006414	G3DSA:2.40.30.10|G3DSA:3.40.50.300|MF_00118_B|PF00009|PF03143|PF03144|PR00315|PS00301|PTHR23115|PTHR23115:SF44|SSF50447|SSF50465|SSF52540|TIGR00231|TIGR00485
tus|tus|AP_002231.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR008865	DNA replication terminus site-binding protein	GO:0003677|GO:0005737|GO:0006274	G3DSA:3.50.14.10|MF_00483|PF05472|SSF56596|TIGR02648
tynA|tynA|AP_002013.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000269|IPR012854|IPR015798|IPR015800|IPR015801|IPR015802|IPR016182	Copper amine oxidase|Copper amine oxidase, C-terminal|Copper amine oxidase, N-terminal|Copper amine oxidase, N2-terminal|Copper amine oxidase, N2/N3-terminal|Copper amine oxidase, N3-terminal|Copper amine oxidase-like, N-terminal	GO:0005507|GO:0008131|GO:0009308|GO:0048038|GO:0055114	G3DSA:2.70.98.20|G3DSA:3.10.450.40|G3DSA:3.30.457.10|PF01179|PF02727|PF02728|PF07833|PS01164|PS01165|PTHR10638|PTHR10638:SF12|SSF49998|SSF54416|SSF55383
tyrA|tyrA|AP_003181.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002701|IPR003099|IPR008244|IPR008927|IPR011277|IPR016040|IPR020822	6-phosphogluconate dehydrogenase, C-terminal-like|Bifunctional chorismate mutase/prephenate dehydrogenase T-protein|Chorismate mutase|Chorismate mutase, T-protein|Chorismate mutase, type II|NAD(P)-binding domain|Prephenate dehydrogenase	GO:0004106|GO:0004665|GO:0005737|GO:0006571|GO:0008977|GO:0046417|GO:0055114	G3DSA:1.10.3660.10|G3DSA:1.20.59.10|G3DSA:3.40.50.720|PF01817|PF02153|PIRSF001499|PS51168|PS51176|PTHR21363|PTHR21363:SF0|SM00830|SSF48179|SSF48600|SSF51735|TIGR01799
tyrB|tyrB|AP_004555.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000796|IPR004838|IPR004839|IPR015421|IPR015424	Aminotransferase, class I/classII|Aminotransferases, class-I, pyridoxal-phosphate-binding site|Aspartate/other aminotransferase|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1	GO:0003824|GO:0006520|GO:0008483|GO:0009058|GO:0030170	G3DSA:3.40.640.10|PF00155|PR00799|PS00105|PTHR11879|PTHR11879:SF0|SSF53383
tyrP|tyrP|AP_002525.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002091|IPR013059|IPR013061|IPR018227	Aromatic amino acid permease|Tryptophan/tryrosine permease, conserved site|Tryptophan/tyrosine permease|Tryptophan/tyrosine transporter	GO:0005887|GO:0006865|GO:0015173|GO:0015801|GO:0016020	PF03222|PR00166|PS00594|PTHR32195|PTHR32195:SF1|TIGR00837
tyrR|tyrR|AP_001950.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000014|IPR002078|IPR003593|IPR009057|IPR025662|IPR025943|IPR025944|IPR027417	AAA+ ATPase domain|Homeodomain-like|P-loop containing nucleoside triphosphate hydrolase|PAS domain|RNA polymerase sigma factor 54 interaction domain|Sigma-54 interaction domain, ATP-binding site 1|Sigma-54 interaction domain, ATP-binding site 2|Sigma-54 interaction domain, conserved site	GO:0000166|GO:0003677|GO:0004871|GO:0005524|GO:0006355|GO:0007165|GO:0008134|GO:0017111	G3DSA:1.10.10.60|G3DSA:1.10.8.60|G3DSA:3.30.450.20|G3DSA:3.30.70.260|G3DSA:3.40.50.300|PF00158|PF13188|PS00675|PS00676|PS00688|PS50045|PS50112|PTHR32071|PTHR32071:SF3|SM00091|SM00382|SSF46689|SSF52540|SSF55021|SSF55785
tyrS|tyrS|AP_002259.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001412|IPR002305|IPR002307|IPR002942|IPR014729|IPR024088|IPR024107	Aminoacyl-tRNA synthetase, class I, conserved site|Aminoacyl-tRNA synthetase, class Ic|RNA-binding S4 domain|Rossmann-like alpha/beta/alpha sandwich fold|Tyrosine-tRNA ligase|Tyrosine-tRNA ligase, bacterial-type|Tyrosine-tRNA ligase, bacterial-type, type 1	GO:0000166|GO:0003723|GO:0004812|GO:0004831|GO:0005524|GO:0005737|GO:0006418|GO:0006437	G3DSA:1.10.240.10|G3DSA:3.10.290.10|G3DSA:3.40.50.620|MF_02006|PF00579|PF01479|PR01040|PS00178|PS50889|PTHR11766|PTHR11766:SF0|SM00363|SSF52374|SSF55174|TIGR00234
ubiA|ubiA|AP_004541.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000537|IPR006370	4-hydroxybenzoate polyprenyl transferase|UbiA prenyltransferase family	GO:0004659|GO:0006744|GO:0009058|GO:0016021	MF_01635|PF01040|PS00943|PTHR11048|PTHR11048:SF14|TIGR01474
ubiB|ubiB|AP_003965.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004147|IPR010232|IPR011009	Probable ubiquinone biosynthesis protein UbiB|Protein kinase-like domain|UbiB domain	GO:0006744|GO:0016772	MF_00414|PF03109|PTHR10566|PTHR10566:SF30|SSF56112|TIGR01982
ubiC|ubiC|AP_004540.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR007440	Chorismate--pyruvate lyase	GO:0005737|GO:0006744|GO:0008813	G3DSA:3.40.1410.10|MF_01632|PF04345|SSF64288
ubiD|ubiD|AP_003959.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002830|IPR012349|IPR023677	3-octaprenyl-4-hydroxybenzoate carboxy-lyase|FMN-binding split barrel|UbiD decarboxylyase family	GO:0005886|GO:0006744|GO:0008694|GO:0010181|GO:0016491|GO:0016831|GO:0055114	G3DSA:1.20.5.570|G3DSA:3.40.1670.10|MF_01636|PF01977|PTHR30108|PTHR30108:SF1|SSF143968|SSF50475|TIGR00148
ubiE|ubiE|AP_003967.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004033|IPR023576|IPR025765	2-methoxy-6-polyprenyl-1,4-benzoquinol methylase domain|UbiE/COQ5 methyltransferase|UbiE/COQ5 methyltransferase, conserved site	GO:0008168	G3DSA:3.40.50.150|MF_01813|PF01209|PS01183|PS01184|PS51608|PTHR10108|PTHR10108:SF24|SSF53335|TIGR01934
ubiF|ubiF|AP_001311.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002938|IPR003042|IPR010971|IPR018168	Aromatic-ring hydroxylase-like|Monooxygenase, FAD-binding|Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6|Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site	GO:0006744|GO:0008152|GO:0016491|GO:0016709|GO:0050660|GO:0055114	G3DSA:3.50.50.60|PF01494|PR00420|PS01304|PTHR13789|PTHR13789:SF5|SSF51905|TIGR01988
ubiG|ubiG|AP_002829.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR010233	Ubiquinone biosynthesis O-methyltransferase	GO:0006744|GO:0008425	G3DSA:3.40.50.150|MF_00472|PF13489|PTHR23134|PTHR23134:SF0|SSF53335|TIGR01983
ubiH|ubiH|AP_003466.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002938|IPR003042|IPR010971|IPR011295|IPR018168	2-polyprenyl-6-methoxyphenol 4-hydroxylase|Aromatic-ring hydroxylase-like|Monooxygenase, FAD-binding|Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6|Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site	GO:0006744|GO:0008152|GO:0008681|GO:0016491|GO:0016709|GO:0050660|GO:0055114	G3DSA:3.50.50.60|PF01494|PR00420|PS01304|PTHR13789|PTHR13789:SF27|SSF51905|TIGR01984|TIGR01988
ubiX|ubiX|AP_002911.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003382|IPR004507	Flavoprotein|Phenylacrylic acid decarboxylase	GO:0003824|GO:0016831	G3DSA:3.40.50.1950|PF02441|PTHR30108|SSF52507|TIGR00421
ucpA|ucpA|AP_003020.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002198|IPR002347|IPR016040	Glucose/ribitol dehydrogenase|NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR	GO:0008152|GO:0016491	G3DSA:3.40.50.720|PF00106|PIRSF000126|PR00080|PR00081|PTHR24322|SSF51735
udk|udk|AP_002666.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000764|IPR006083|IPR027417	P-loop containing nucleoside triphosphate hydrolase|Phosphoribulokinase/uridine kinase|Uridine kinase	GO:0004849|GO:0005524|GO:0008152|GO:0016301|GO:0016773	G3DSA:3.40.50.300|MF_00551|PF00485|PR00988|PTHR10285|SSF52540|TIGR00235
udp|udp|AP_003969.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000845|IPR010058|IPR018016|IPR018017	Nucleoside phosphorylase|Nucleoside phosphorylase domain|Nucleoside phosphorylase, conserved site|Uridine phosphorylase	GO:0003824|GO:0004850|GO:0005737|GO:0009116|GO:0009166|GO:0016763	G3DSA:3.40.50.1580|PF01048|PS01232|PTHR21234|PTHR21234:SF8|SSF53167|TIGR01718
ugd|ugd|AP_002629.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001732|IPR008927|IPR013328|IPR014026|IPR014027|IPR016040|IPR017476	6-phosphogluconate dehydrogenase, C-terminal-like|Dehydrogenase, multihelical|NAD(P)-binding domain|Nucleotide sugar dehydrogenase|UDP-glucose/GDP-mannose dehydrogenase, C-terminal|UDP-glucose/GDP-mannose dehydrogenase, N-terminal|UDP-glucose/GDP-mannose dehydrogenase, dimerisation	GO:0016491|GO:0016616|GO:0050662|GO:0051287|GO:0055114	G3DSA:1.10.1040.10|G3DSA:3.40.50.720|PF00984|PF03720|PF03721|PIRSF000124|PTHR11374|PTHR11374:SF17|SM00984|SSF48179|SSF51735|SSF52413|TIGR03026
ugpA|ugpA|AP_004340.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000515	Binding-protein-dependent transport systems inner membrane component	GO:0005215|GO:0006810|GO:0016020	G3DSA:1.10.3720.10|PF00528|PS50928|PTHR32371|PTHR32371:SF0|SSF161098
ugpB|ugpB|AP_004339.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR006059|IPR006061	Bacterial extracellular solute-binding family 1, conserved site|Bacterial extracellular solute-binding, family 1	GO:0005215|GO:0006810	G3DSA:3.40.190.10|PF01547|PS01037|PTHR30061|PTHR30061:SF0|SSF53850
ugpC|ugpC|AP_004342.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003439|IPR003593|IPR008995|IPR012340|IPR013611|IPR017871|IPR017922|IPR027417	AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter, glycerol-3-phosphate import ATP-binding protein|ABC transporter-like|Molybdate/tungstate binding, C-terminal|Nucleic acid-binding, OB-fold|P-loop containing nucleoside triphosphate hydrolase|Transport-associated OB, type 2	GO:0000166|GO:0005215|GO:0005524|GO:0006810|GO:0015430|GO:0015794|GO:0016820|GO:0016887|GO:0017111|GO:0043190	G3DSA:2.40.50.100|G3DSA:2.40.50.140|G3DSA:3.40.50.300|PF00005|PF08402|PS00211|PS50893|PS51315|PTHR24220|PTHR24220:SF151|SM00382|SSF50331|SSF52540
ugpE|ugpE|AP_004341.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000515	Binding-protein-dependent transport systems inner membrane component	GO:0005215|GO:0006810|GO:0016020	G3DSA:1.10.3720.10|PF00528|PS50928|PTHR32243|SSF161098
ugpQ|ugpQ|AP_004343.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004129|IPR017946	Glycerophosphoryl diester phosphodiesterase|PLC-like phosphodiesterase, TIM beta/alpha-barrel domain	GO:0006071|GO:0006629|GO:0008081|GO:0008889	G3DSA:3.20.20.190|PF03009|PTHR23344|SSF51695
uhpA|uhpA|AP_004123.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000792|IPR001789|IPR011006|IPR011991|IPR016032	CheY-like superfamily|Signal transduction response regulator, C-terminal effector|Signal transduction response regulator, receiver domain|Transcription regulator LuxR, C-terminal|Winged helix-turn-helix DNA-binding domain	GO:0000156|GO:0000160|GO:0003677|GO:0003700|GO:0005622|GO:0006355|GO:0043565	G3DSA:1.10.10.10|G3DSA:3.40.50.2300|PF00072|PF00196|PR00038|PS00622|PS50043|PS50110|PTHR26402|SM00421|SM00448|SSF46894|SSF52172
uhpB|uhpB|AP_004124.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003594|IPR005467|IPR007895|IPR011712	Histidine kinase-like ATPase, ATP-binding domain|MASE1|Signal transduction histidine kinase, core|Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain	GO:0000155|GO:0000160|GO:0005524|GO:0016021|GO:0046983	G3DSA:3.30.565.10|PF02518|PF05231|PF07730|PS50109|PTHR24423|PTHR24423:SF359|SM00387|SSF55874
uhpC|uhpC|AP_004125.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000849|IPR011701|IPR016196|IPR020846|IPR021159	Glycerate/sugar phosphate transporter, conserved site|Major facilitator superfamily|Major facilitator superfamily domain|Major facilitator superfamily domain, general substrate transporter|Sugar phosphate transporter	GO:0005215|GO:0006810|GO:0016021|GO:0055085	G3DSA:1.20.1250.20|PF07690|PIRSF002808|PS00942|PS50850|PTHR11662|PTHR11662:SF13|SSF103473|TIGR00881
uhpT|uhpT|AP_004126.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000849|IPR011701|IPR016196|IPR020846|IPR021159	Glycerate/sugar phosphate transporter, conserved site|Major facilitator superfamily|Major facilitator superfamily domain|Major facilitator superfamily domain, general substrate transporter|Sugar phosphate transporter	GO:0005215|GO:0006810|GO:0016021|GO:0055085	G3DSA:1.20.1250.20|PF07690|PIRSF002808|PS00942|PS50850|PTHR11662|PTHR11662:SF13|SSF103473|TIGR00881
uidA|uidA|AP_002238.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR006101|IPR006102|IPR006103|IPR006104|IPR008979|IPR013781|IPR013812|IPR017853|IPR023230|IPR023232	Galactose-binding domain-like|Glycoside hydrolase, catalytic domain|Glycoside hydrolase, family 2|Glycoside hydrolase, family 2, N-terminal|Glycoside hydrolase, family 2, TIM barrel|Glycoside hydrolase, family 2, active site|Glycoside hydrolase, family 2, conserved site|Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich|Glycoside hydrolase, family 2/20, immunoglobulin-like beta-sandwich domain|Glycoside hydrolase, superfamily	GO:0003824|GO:0004553|GO:0005975	G3DSA:2.60.120.260|G3DSA:2.60.40.320|G3DSA:3.20.20.80|PF00703|PF02836|PF02837|PR00132|PS00608|PS00719|PTHR10066|PTHR10066:SF40|SSF49303|SSF49785|SSF51445
uidB|uidB|AP_002237.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001927|IPR016196|IPR018043	Major facilitator superfamily domain, general substrate transporter|Sodium:galactoside symporter|Sodium:galactoside symporter, conserved site	GO:0005215|GO:0006814|GO:0016020	G3DSA:1.20.1250.20|PF13347|PS00872|PTHR11328|PTHR11328:SF23|SSF103473|TIGR00792
uidC|uidC|AP_002236.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR005318|IPR023614	Outer membrane porin, bacterial|Porin domain	GO:0006810|GO:0015288|GO:0016021	G3DSA:2.40.160.10|PF03573
uidR|uidR|AP_002239.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001647|IPR009057|IPR011075|IPR015893|IPR023772	DNA-binding HTH domain, TetR-type|DNA-binding HTH domain, TetR-type, conserved site|Homeodomain-like|Tetracycline transcriptional regulator, TetR-like, C-terminal|Tetracycline transcriptional regulator, TetR-related, C-terminal	GO:0003677	G3DSA:1.10.357.10|PF00440|PR00455|PS01081|PS50977|SSF46689|SSF48498
ulaA|ulaA|AP_004693.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004703	Phosphotransferase system, sugar-specific permease component	GO:0009401|GO:0016021	PF03611
ulaB|ulaB|AP_004694.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003501	Phosphotransferase system, EIIB component, type 2/3	GO:0008982|GO:0009401	G3DSA:3.40.50.270|PF02302|SSF52794
ulaC|ulaC|AP_004695.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002178|IPR016152	Phosphotransferase system, phosphoenolpyruvate-dependent sugar EIIA 2|Phosphotransferase/anion transporter	GO:0005215|GO:0005351|GO:0006810|GO:0009401	G3DSA:3.40.930.10|PF00359|PS00372|PS51094|SSF55804
ulaD|ulaD|AP_004696.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001754|IPR011060|IPR013785|IPR023942	3-keto-L-gulonate-6-phosphate decarboxylase, UlaD|Aldolase-type TIM barrel|Orotidine 5'-phosphate decarboxylase domain|Ribulose-phosphate binding barrel	GO:0000287|GO:0003824|GO:0004590|GO:0006207|GO:0008152|GO:0019854|GO:0033982	G3DSA:3.20.20.70|MF_01267|PF00215|PTHR30562|SM00934|SSF51366
ulaE|ulaE|AP_004697.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004560|IPR013022|IPR023492	L-ribulose-5-phosphate 3-epimerase|L-ribulose-5-phosphate 3-epimerase, Enterobacteriaceae|Xylose isomerase-like, TIM barrel domain	GO:0005975|GO:0016861|GO:0034015	G3DSA:3.20.20.150|MF_01951|PF01261|PTHR12110|SSF51658|TIGR00542
ulaF|ulaF|AP_004698.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001303|IPR023499	Class II aldolase/adducin N-terminal|L-ribulose-5-phosphate 4-epimerase UlaF	GO:0008742|GO:0046872	G3DSA:3.40.225.10|MF_01952|PF00596|PTHR22789|SM01007|SSF53639
ulaG|ulaG|AP_004692.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001279	Beta-lactamase-like	GO:0016787	G3DSA:3.60.15.10|PF12706|SSF56281
ulaR|ulaR|AP_004691.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001034|IPR011991|IPR014036|IPR018356|IPR023711	DeoR C-terminal sensor domain|HTH DeoR N-terminal domain|Transcription regulator HTH, UlaR|Transcription regulator, HTH DeoR-type, conserved site|Winged helix-turn-helix DNA-binding domain	GO:0003700|GO:0005622|GO:0005737|GO:0006355|GO:0045892	G3DSA:1.10.10.10|MF_01563|PF00455|PF08220|PR00037|PS00894|PS51000|PTHR30363|PTHR30363:SF0|SM00420|SSF100950|SSF46785
umuC|umuC|AP_001809.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001126|IPR017961|IPR017963|IPR024728|IPR025188	DNA polymerase type-Y, HhH motif|DNA polymerase, Y-family, little finger domain|DNA-repair protein, UmuC-like|DNA-repair protein, UmuC-like, N-terminal|Domain of unknown function DUF4113	GO:0003684|GO:0003887|GO:0006281	G3DSA:1.10.150.20|G3DSA:3.30.1490.100|G3DSA:3.30.70.270|PF00817|PF11798|PF11799|PF13438|PS50173|PTHR11076|PTHR11076:SF8|SSF100879|SSF56672
umuD|umuD|AP_001808.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR006197|IPR011056|IPR015927|IPR019759	Peptidase S24, LexA-like|Peptidase S24/S26A/S26B|Peptidase S24/S26A/S26B/S26C|Peptidase S24/S26A/S26B/S26C, beta-ribbon domain	GO:0003677|GO:0006355	G3DSA:2.10.109.10|PF00717|PR00726|SSF51306
ung|ung|AP_003166.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002043|IPR005122|IPR018085	Uracil-DNA glycosylase|Uracil-DNA glycosylase, active site|Uracil-DNA glycosylase-like	GO:0004844|GO:0006281|GO:0006284|GO:0016799	G3DSA:3.40.470.10|MF_00148|PF03167|PS00130|PTHR11264|SM00986|SM00987|SSF52141|TIGR00628
upp|upp|AP_003084.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000836|IPR005765	Phosphoribosyltransferase domain|Uracil phosphoribosyl transferase	GO:0004845|GO:0006223|GO:0009116	G3DSA:3.40.50.2020|PF00156|PTHR24583|SSF53271|TIGR01091
uraA|uraA|AP_003083.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR006042|IPR006043	Xanthine/uracil permease|Xanthine/uracil/vitamin C permease	GO:0005215|GO:0006810|GO:0016020|GO:0055085	PF00860|PS01116|PTHR11119|PTHR11119:SF10|TIGR00801
usg|usg|AP_002919.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000534|IPR012080|IPR012280|IPR016040	Aspartate-semialdehyde dehydrogenase|NAD(P)-binding domain|Semialdehyde dehydrogenase, NAD-binding|Semialdehyde dehydrogenase, dimerisation domain	GO:0003942|GO:0004073|GO:0005737|GO:0006520|GO:0008652|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0016620|GO:0046983|GO:0050661|GO:0051287|GO:0055114	G3DSA:3.30.360.10|G3DSA:3.40.50.720|PF01118|PF02774|PIRSF000148|PTHR10174|SM00859|SSF51735|SSF55347
ushA|ushA|AP_001129.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004843|IPR006146|IPR006179|IPR008334	5'-Nucleotidase, C-terminal|5'-Nucleotidase, conserved site|5'-Nucleotidase/apyrase|Metallophosphoesterase domain	GO:0000166|GO:0009166|GO:0016787|GO:0016788|GO:0046872	G3DSA:3.60.21.10|G3DSA:3.90.780.10|PF00149|PF02872|PR01607|PS00785|PS00786|PTHR11575|PTHR11575:SF7|SSF55816|SSF56300
uspA|uspA|AP_004298.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR006015|IPR006016|IPR014729	Rossmann-like alpha/beta/alpha sandwich fold|Universal stress protein A|UspA	GO:0006950	G3DSA:3.40.50.620|PF00582|PIRSF006276|SSF52402
uspE|uspE|AP_001961.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR006016|IPR014729	Rossmann-like alpha/beta/alpha sandwich fold|UspA	GO:0006950	G3DSA:3.40.50.620|PF00582|SSF52402
uspF|uspF|AP_002002.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR006015|IPR006016|IPR014729	Rossmann-like alpha/beta/alpha sandwich fold|Universal stress protein A|UspA	GO:0006950	G3DSA:3.40.50.620|PF00582|PR01438|SSF52402
uspG|uspG|AP_001255.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR006015|IPR006016|IPR014729	Rossmann-like alpha/beta/alpha sandwich fold|Universal stress protein A|UspA	GO:0006950	G3DSA:3.40.50.620|PF00582|PR01438|SSF52402
uup|uup|AP_001579.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003439|IPR003593|IPR017871|IPR027417	AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase	GO:0000166|GO:0005524|GO:0016887|GO:0017111	G3DSA:3.40.50.300|PF00005|PF12848|PS00211|PS50893|PTHR19211|PTHR19211:SF7|SM00382|SSF52540
uvrA|uvrA|AP_004559.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003439|IPR004602|IPR013815|IPR017871|IPR027417	ABC transporter, conserved site|ABC transporter-like|ATP-grasp fold, subdomain 1|P-loop containing nucleoside triphosphate hydrolase|UvrABC system subunit A	GO:0003824|GO:0005524|GO:0006289|GO:0009380|GO:0009381|GO:0016887	G3DSA:1.10.8.280|G3DSA:1.20.1580.10|G3DSA:3.30.1490.20|G3DSA:3.40.50.300|MF_00205|PF00005|PS00211|PS50893|PTHR32282|PTHR32282:SF1|SSF52540|TIGR00630
uvrB|uvrB|AP_001410.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001650|IPR001943|IPR004807|IPR006935|IPR014001|IPR024759|IPR027417	Helicase, C-terminal|Helicase, superfamily 1/2, ATP-binding domain|Helicase/UvrB domain|P-loop containing nucleoside triphosphate hydrolase|UVR domain|UvrABC system, subunit B|UvrB, YAD/RRR-motif-containing domain	GO:0003676|GO:0003677|GO:0004386|GO:0005515|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432|GO:0016787	G3DSA:3.30.2060.10|G3DSA:3.40.50.300|G3DSA:4.10.860.10|MF_00204|PF00271|PF02151|PF04851|PF12344|PS50151|PS51192|PS51194|PTHR24029|PTHR24029:SF10|SM00487|SM00490|SSF46600|SSF52540|TIGR00631
uvrC|uvrC|AP_002528.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000305|IPR000445|IPR001162|IPR001943|IPR003583|IPR004791|IPR010994|IPR027299	GIY-YIG domain|GIY-YIG nuclease superfamily|Helix-hairpin-helix DNA-binding motif, class 1|Helix-hairpin-helix motif|RuvA domain 2-like|UVR domain|UvrABC system, subunit C|UvrC family homology region	GO:0003677|GO:0005515|GO:0005737|GO:0006281|GO:0009380|GO:0009381	G3DSA:1.10.150.20|G3DSA:3.40.1440.10|G3DSA:4.10.860.10|MF_00203|PF00633|PF01541|PF02151|PF08459|PS50151|PS50164|PS50165|PTHR30562|PTHR30562:SF1|SM00278|SM00465|SSF46600|SSF47781|SSF82771|TIGR00194
uvrD|uvrD|AP_003986.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000212|IPR005753|IPR013986|IPR014016|IPR014017|IPR027417	DExx box DNA helicase domain|DNA helicase, ATP-dependent, UvrD type|DNA helicase, UvrD-like, C-terminal|DNA helicase, UvrD/REP type|P-loop containing nucleoside triphosphate hydrolase|UvrD-like Helicase, ATP-binding domain	GO:0003677|GO:0004003|GO:0005524|GO:0005737|GO:0006268|GO:0016787	G3DSA:1.10.10.160|G3DSA:1.10.486.10|G3DSA:3.40.50.300|PF00580|PF13361|PS51198|PS51217|PTHR11070|SSF52540|TIGR01075
uvrY|uvrY|AP_002529.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000792|IPR001789|IPR011006|IPR011991|IPR016032	CheY-like superfamily|Signal transduction response regulator, C-terminal effector|Signal transduction response regulator, receiver domain|Transcription regulator LuxR, C-terminal|Winged helix-turn-helix DNA-binding domain	GO:0000156|GO:0000160|GO:0003677|GO:0003700|GO:0005622|GO:0006355|GO:0043565	G3DSA:1.10.10.10|G3DSA:3.40.50.2300|PF00072|PF00196|PR00038|PS00622|PS50043|PS50110|PTHR26402|PTHR26402:SF141|SM00421|SM00448|SSF46894|SSF52172
uxaA|uxaA|AP_003640.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR007392|IPR013974	D-galactarate dehydratase/Altronate hydrolase, C-terminal|SAF domain	GO:0016836	PF04295|PF08666|PTHR30536|PTHR30536:SF0|SM00858
uxaB|uxaB|AP_002142.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR008927|IPR013118|IPR013131|IPR013328|IPR016040|IPR023668	6-phosphogluconate dehydrogenase, C-terminal-like|Altronate oxidoreductase|Dehydrogenase, multihelical|Mannitol dehydrogenase, C-terminal|Mannitol dehydrogenase, N-terminal|NAD(P)-binding domain	GO:0009026|GO:0016491|GO:0016616|GO:0050662|GO:0055114	G3DSA:1.10.1040.10|G3DSA:3.40.50.720|MF_00670|PF01232|PF08125|PTHR30280|SSF48179|SSF51735
uxaC|uxaC|AP_003641.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003766|IPR023177	Uronate isomerase|Uronate isomerase, domain 2	GO:0006064|GO:0008880	G3DSA:1.10.2020.10|G3DSA:3.20.20.140|MF_00675|PF02614|PTHR30068|PTHR30068:SF0|SSF51556
uxuA|uxuA|AP_004814.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004628|IPR013022	Mannonate dehydratase|Xylose isomerase-like, TIM barrel domain	GO:0006064|GO:0008927	G3DSA:3.20.20.150|PF03786|PIRSF016049|PTHR30387|PTHR30387:SF0|SSF51658|TIGR00695
uxuB|uxuB|AP_004815.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000669|IPR008927|IPR013118|IPR013131|IPR013328|IPR016040|IPR023027	6-phosphogluconate dehydrogenase, C-terminal-like|Dehydrogenase, multihelical|Mannitol dehydrogenase|Mannitol dehydrogenase, C-terminal|Mannitol dehydrogenase, N-terminal|Mannitol dehydrogenase, conserved site|NAD(P)-binding domain	GO:0003824|GO:0008152|GO:0008926|GO:0016491|GO:0016616|GO:0050662|GO:0055114	G3DSA:1.10.1040.10|G3DSA:3.40.50.720|PF01232|PF08125|PR00084|PS00974|PTHR30562|PTHR30562:SF2|SSF48179|SSF51735
uxuR|uxuR|AP_004816.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000524|IPR008920|IPR011711|IPR011991|IPR027376	FadR/GntR C-terminal domain|Fatty acid responsive transcription factor FadR, C-terminal|GntR, C-terminal|Transcription regulator HTH, GntR|Winged helix-turn-helix DNA-binding domain	GO:0000062|GO:0003677|GO:0003700|GO:0005622|GO:0006355|GO:0019217	G3DSA:1.10.10.10|G3DSA:1.20.120.530|PF00392|PF07729|PR00035|PS50949|PTHR11751|PTHR11751:SF180|SM00345|SM00895|SSF46785|SSF48008
vacJ|vacJ|AP_002946.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR007428	VacJ-like lipoprotein	GO:0016020	PF04333|PR01805|PS51257|PTHR30035
valS|valS|AP_004754.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001412|IPR002300|IPR002303|IPR009008|IPR009080|IPR010978|IPR013155|IPR014729|IPR019499	Aminoacyl-tRNA synthetase, class 1a, anticodon-binding|Aminoacyl-tRNA synthetase, class I, conserved site|Aminoacyl-tRNA synthetase, class Ia|Rossmann-like alpha/beta/alpha sandwich fold|Valine-tRNA ligase|Valyl-tRNA synthetase,  tRNA-binding arm|Valyl/Leucyl/Isoleucyl-tRNA synthetase, class I, anticodon-binding|Valyl/Leucyl/Isoleucyl-tRNA synthetase, class Ia, editing domain|tRNA-binding arm	GO:0000166|GO:0002161|GO:0004812|GO:0004832|GO:0005524|GO:0005737|GO:0006418|GO:0006438	G3DSA:1.10.287.380|G3DSA:1.10.730.10|G3DSA:3.40.50.620|G3DSA:3.90.740.10|MF_02004|PF00133|PF08264|PF10458|PR00986|PS00178|PTHR11946|PTHR11946:SF5|SSF46589|SSF47323|SSF50677|SSF52374|TIGR00422
visC|visC|AP_003465.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002938|IPR003042|IPR010971	Aromatic-ring hydroxylase-like|Monooxygenase, FAD-binding|Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6	GO:0006744|GO:0008152|GO:0016491|GO:0016709|GO:0050660|GO:0055114	G3DSA:3.50.50.60|PF01494|PR00420|PTHR13789|PTHR13789:SF5|SSF51905|TIGR01988
vsr|vsr|AP_002571.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004603|IPR011335	DNA mismatch endonuclease vsr|Restriction endonuclease  type II-like	GO:0004519|GO:0006298	G3DSA:3.40.960.10|PF03852|PIRSF018267|SSF52980|TIGR00632
wbbH|wbbH|AP_002635.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091				
wbbI|wbbI|AP_002634.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR016503	UDP-galactofuranosyltransferase		PIRSF007023
wbbJ|wbbJ|AP_002633.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001451|IPR011004	Bacterial transferase hexapeptide repeat|Trimeric LpxA-like	GO:0016740	G3DSA:2.160.10.10|PF00132|PTHR23416|PTHR23416:SF26|SSF51161
wbbK|wbbK|AP_002632.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001296	Glycosyl transferase, family 1	GO:0009058	G3DSA:3.40.50.2000|PF00534|PTHR12526|PTHR12526:SF6|SSF53756
wcaA|wcaA|AP_002659.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001173|IPR024009	Colanic acid biosynthesis, glycosyl transferase, WcaA|Glycosyl transferase, family 2		G3DSA:3.90.550.10|PF00535|PTHR22916|SSF53448|TIGR04017
wcaB|wcaB|AP_002658.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001451|IPR005881|IPR011004|IPR018357|IPR024027	Bacterial transferase hexapeptide repeat|Colanic acid biosynthesis, acetyltransferase, WcaB|Hexapeptide transferase, conserved site|Serine O-acetyltransferase|Trimeric LpxA-like	GO:0005737|GO:0006535|GO:0009001|GO:0016740|GO:0016747	G3DSA:2.160.10.10|PF00132|PIRSF000441|PS00101|PTHR23416|PTHR23416:SF22|SSF51161|TIGR04016
wcaC|wcaC|AP_002657.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001296|IPR023916	Colanic acid biosynthesis, glycosyl transferase, WcaC|Glycosyl transferase, family 1	GO:0009058	PF00534|PTHR12526|PTHR12526:SF5|SSF53756|TIGR04015
wcaD|wcaD|AP_002656.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR024013	Colanic acid biosynthesis, putative colanic acid polymerase, WcaD		TIGR04010
wcaE|wcaE|AP_002655.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001173|IPR024010	Colanic acid biosynthesis, glycosyl transferase,  WcaE|Glycosyl transferase, family 2		G3DSA:3.90.550.10|PF00535|PTHR22916|SSF53448|TIGR04009
wcaF|wcaF|AP_002654.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001451|IPR011004|IPR018357|IPR024005	Bacterial transferase hexapeptide repeat|Colanic acid biosynthesis, acetyltransferase, WcaF|Hexapeptide transferase, conserved site|Trimeric LpxA-like	GO:0016740	G3DSA:2.160.10.10|PF00132|PS00101|PTHR23416|PTHR23416:SF29|SSF51161|TIGR04008
wcaI|wcaI|AP_002650.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001296|IPR023910	Colanic acid biosynthesis, glycosyl transferase, WcaI|Glycosyl transferase, family 1	GO:0009058	G3DSA:3.40.50.2000|PF00534|PF13579|PTHR12526|PTHR12526:SF213|SSF53756|TIGR04007
wcaJ|wcaJ|AP_002647.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003362|IPR017473|IPR017475	Bacterial sugar transferase|Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase|Undecaprenyl-phosphate glucose phosphotransferase, WcaJ		PF02397|PF13727|PTHR30576|PTHR30576:SF0|TIGR03023|TIGR03025
wcaK|wcaK|AP_002645.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR007345|IPR023918	Colanic acid biosynthesis, pyruvyl transferase, WcaK|Polysaccharide pyruvyl transferase		PF04230|TIGR04006
wcaL|wcaL|AP_002644.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001296|IPR023884	Colanic acid biosynthesis, glycosyl transferase, WcaL|Glycosyl transferase, family 1	GO:0009058	G3DSA:3.40.50.2000|PF00534|PTHR12526|PTHR12526:SF101|SSF53756|TIGR04005
wcaM|wcaM|AP_002643.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR011050|IPR012334|IPR023882	Colanic acid biosynthesis WcaM|Pectin lyase fold|Pectin lyase fold/virulence factor		G3DSA:2.160.20.10|SSF51126|TIGR04004
wrbA|wrbA|AP_001635.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR005025|IPR010089	Flavoprotein WrbA|NADPH-dependent FMN reductase	GO:0010181|GO:0045892	G3DSA:3.40.50.360|PF03358|PTHR30546|SSF52218|TIGR01755
wza|wza|AP_002662.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003715|IPR019554	Polysaccharide export protein|Soluble ligand binding domain	GO:0015159|GO:0015774|GO:0016020	G3DSA:1.20.5.70|G3DSA:3.10.560.10|G3DSA:3.30.1950.10|PF02563|PF10531|PS51257
wzb|wzb|AP_002661.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000106|IPR017867|IPR023485	Phosphotyrosine protein phosphatase I superfamily|Protein-tyrosine phosphatase, low molecular weight|Protein-tyrosine phosphatase/arsenate reductase	GO:0004725|GO:0006470	G3DSA:3.40.50.270|PF01451|PR00719|PTHR11717|SM00226|SSF52788
wzc|wzc|AP_002660.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003856|IPR005702|IPR025669|IPR027417	AAA domain|Exopolysaccharide synthesis protein|Lipopolysaccharide biosynthesis|P-loop containing nucleoside triphosphate hydrolase	GO:0009103|GO:0016020|GO:0030234|GO:0045227	G3DSA:3.40.50.300|PF02706|PF13614|PF13807|PTHR32309|PTHR32309:SF0|SSF52540|TIGR01007
wzxC|wzxC|AP_002646.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002797	Polysaccharide biosynthesis protein	GO:0000271|GO:0016020	PF01943|PTHR30250|PTHR30250:SF0
wzxE|wzxE|AP_004005.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002797	Polysaccharide biosynthesis protein	GO:0000271|GO:0016020	PF01943
wzyE|wzyE|AP_004003.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR010691	Uncharacterised protein family WzyE	GO:0016021	MF_01003|PF06899
wzzE|wzzE|AP_004012.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003856	Lipopolysaccharide biosynthesis	GO:0009103|GO:0016020	G3DSA:3.30.1890.10|PF02706|SSF160355
xapA|xapA|AP_003000.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000845|IPR001369|IPR010943|IPR011268|IPR018099	Nucleoside phosphorylase domain|PNP/MTAP phosphorylase|Purine nucleoside phosphorylase|Purine phosphorylase, family 2, conserved site|Xanthosine phosphorylase	GO:0003824|GO:0004731|GO:0005737|GO:0006139|GO:0009116|GO:0016763|GO:0055086	G3DSA:3.40.50.1580|PF01048|PIRSF000477|PS01240|PTHR11904|PTHR11904:SF9|SSF53167|TIGR01697|TIGR01699
xapB|xapB|AP_002999.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004740|IPR016196|IPR020846	Major facilitator superfamily domain|Major facilitator superfamily domain, general substrate transporter|Nucleoside:H+ symporter	GO:0005337|GO:0015858|GO:0016021	G3DSA:1.20.1250.20|PF03825|PS50850|PTHR24003|PTHR24003:SF284|SSF103473|TIGR00889
xapR|xapR|AP_002998.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000847|IPR005119|IPR011991	LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain	GO:0003700|GO:0006355	G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PR00039|PS50931|PTHR30346|SSF46785|SSF53850
xdhA|xdhA|AP_003426.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000674|IPR008274	Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead|Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding	GO:0016491|GO:0055114	G3DSA:3.30.365.10|G3DSA:3.90.1170.50|PF01315|PF02738|PTHR11908|PTHR11908:SF4|SM01008|SSF54665|SSF56003
xdhB|xdhB|AP_003427.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002346|IPR005107|IPR016166|IPR016167|IPR016169	CO dehydrogenase flavoprotein, C-terminal|CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2|FAD-binding, type 2|FAD-binding, type 2, subdomain 1|Molybdopterin dehydrogenase, FAD-binding	GO:0003824|GO:0008762|GO:0016491|GO:0016614|GO:0050660|GO:0055114	G3DSA:3.30.390.50|G3DSA:3.30.43.10|G3DSA:3.30.465.10|PF00941|PF03450|PS51387|PTHR11908|PTHR11908:SF3|SM01092|SSF55447|SSF56176
xdhC|xdhC|AP_003428.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001041|IPR002888|IPR012675	2Fe-2S ferredoxin-type domain|Beta-grasp domain|[2Fe-2S]-binding	GO:0009055|GO:0016491|GO:0046872|GO:0051536|GO:0055114	G3DSA:1.10.150.120|G3DSA:3.10.20.30|PF00111|PF01799|PS51085|PTHR11908|SSF47741|SSF54292
xdhD|xdhD|AP_003441.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000674|IPR002888|IPR008274|IPR017699	Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead|Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding|Probable selenate reductase, molybdenum-binding subunit|[2Fe-2S]-binding	GO:0016491|GO:0046872|GO:0055114	G3DSA:1.10.150.120|G3DSA:3.30.365.10|G3DSA:3.90.1170.50|PF01315|PF01799|PF02738|PTHR11908|PTHR11908:SF4|SM01008|SSF47741|SSF54665|SSF56003|TIGR03313
xerC|xerC|AP_003988.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002104|IPR004107|IPR010998|IPR011010|IPR011931|IPR013762|IPR023009|IPR023109	DNA breaking-rejoining enzyme, catalytic core|Integrase, Lambda-type, N-terminal|Integrase, SAM-like, N-terminal|Integrase, catalytic|Integrase-like, catalytic core|Integrase/recombinase, N-terminal|Tyrosine recombinase XerC|Tyrosine recombinase XerC/XerD	GO:0003677|GO:0006310|GO:0007049|GO:0007059|GO:0015074|GO:0051301	G3DSA:1.10.150.130|G3DSA:1.10.443.10|MF_01808|PF00589|PF02899|PTHR30349|PTHR30349:SF1|SSF47823|SSF56349|TIGR02224
xerD|xerD|AP_003453.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002104|IPR004107|IPR010998|IPR011010|IPR011932|IPR013762|IPR023009|IPR023109	DNA breaking-rejoining enzyme, catalytic core|Integrase, Lambda-type, N-terminal|Integrase, SAM-like, N-terminal|Integrase, catalytic|Integrase-like, catalytic core|Integrase/recombinase, N-terminal|Tyrosine recombinase XerC/XerD|Tyrosine recombinase XerD	GO:0003677|GO:0006310|GO:0007049|GO:0007059|GO:0015074|GO:0051301	G3DSA:1.10.150.130|G3DSA:1.10.443.10|MF_01807|MF_01808|PF00589|PF02899|PTHR30349|PTHR30349:SF1|SSF47823|SSF56349|TIGR02225
xseA|xseA|AP_003095.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003753|IPR020579|IPR025824	Exonuclease VII, large subunit|Exonuclease VII, large subunit, C-terminal|OB-fold nucleic acid binding domain	GO:0003676|GO:0006308|GO:0008855|GO:0009318	MF_00378|PF02601|PF13742|PTHR30008|PTHR30008:SF0|TIGR00237
xseB|xseB|AP_001072.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003761	Exonuclease VII, small subunit	GO:0006308|GO:0008855|GO:0009318	G3DSA:1.10.287.1040|PF02609|PIRSF006488|SSF116842|TIGR01280
xthA|xthA|AP_002368.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004808|IPR005135|IPR020847|IPR020848	AP endonuclease, family 1, binding site|AP endonuclease, family 1, conserved site|Endonuclease/exonuclease/phosphatase|Exodeoxyribonuclease III xth	GO:0003677|GO:0004518|GO:0004519|GO:0005622|GO:0006281	G3DSA:3.60.10.10|PF03372|PS00726|PS00727|PS00728|PS51435|PTHR22748|PTHR22748:SF0|SSF56219|TIGR00195|TIGR00633
xylA|xylA|AP_004227.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001998|IPR013022|IPR013452	Xylose isomerase|Xylose isomerase, bacterial-type|Xylose isomerase-like, TIM barrel domain	GO:0005975|GO:0009045	G3DSA:3.20.20.150|MF_00455|PF01261|PR00688|PS51415|PTHR32176|PTHR32176:SF0|SSF51658|TIGR02630
xylB|xylB|AP_004228.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR006000|IPR018483|IPR018484|IPR018485	Carbohydrate kinase, FGGY, C-terminal|Carbohydrate kinase, FGGY, N-terminal|Carbohydrate kinase, FGGY, conserved site|Xylulokinase	GO:0004856|GO:0005975|GO:0005997|GO:0016773	G3DSA:3.30.420.40|PF00370|PF02782|PS00445|PS00933|PTHR10196|PTHR10196:SF10|SSF53067|TIGR01312
xylE|xylE|AP_004532.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003663|IPR005828|IPR005829|IPR016196|IPR020846	General substrate transporter|Major facilitator superfamily domain|Major facilitator superfamily domain, general substrate transporter|Sugar transporter, conserved site|Sugar/inositol transporter	GO:0005215|GO:0006810|GO:0016020|GO:0016021|GO:0022857|GO:0022891|GO:0055085	G3DSA:1.20.1250.20|PF00083|PR00171|PS00216|PS00217|PS50850|PTHR24063|PTHR24063:SF151|SSF103473|TIGR00879
xylF|xylF|AP_004226.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR013456|IPR025997	D-xylose ABC transporter, substrate-binding protein|Periplasmic binding protein domain	GO:0015753|GO:0048029	G3DSA:3.40.50.2300|PF13407|PTHR30036|SSF53822|TIGR02634
xylG|xylG|AP_004225.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003439|IPR003593|IPR013455|IPR017871|IPR027417	AAA+ ATPase domain|ABC transporter, D-xylose, ATP-binding protein|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase	GO:0000166|GO:0005524|GO:0015614|GO:0015753|GO:0016020|GO:0016887|GO:0017111	G3DSA:3.40.50.300|PF00005|PS00211|PS50893|PS51280|PTHR24220|PTHR24220:SF84|SM00382|SSF52540|TIGR02633
xylH|xylH|AP_004224.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001851	ABC transporter, permease	GO:0005215|GO:0006810|GO:0016020	PF02653|PTHR32196|PTHR32196:SF7
xylR|xylR|AP_004223.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR009057|IPR018060|IPR020449	DNA binding HTH domain, AraC-type|Homeodomain-like|Transcription regulator HTH, AraC- type	GO:0003677|GO:0003700|GO:0005622|GO:0006355|GO:0043565	G3DSA:1.10.10.60|G3DSA:3.40.50.2300|PF12833|PF13377|PR00032|PTHR11019|SM00342|SSF46689|SSF53822
yaaA|yaaA|AP_000670.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR005583	Uncharacterised protein family UPF0246		MF_00652|PF03883|PTHR30283|PTHR30283:SF0
yaaH|yaaH|AP_000674.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000791	GPR1/FUN34/yaaH	GO:0016020	PF01184|PS01114|PTHR30178|PTHR30178:SF0
yaaI|yaaI|AP_000677.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR020240	Uncharacterised protein family UPF0412, YaaI		MF_01372|PD082838|PF10807
yaaJ|yaaJ|AP_000671.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001463	Sodium:alanine symporter	GO:0006814|GO:0015655|GO:0016020|GO:0032328	PF01235|PR00175|PS00873|PTHR30330|PTHR30330:SF0|TIGR00835
yaaU|yaaU|AP_000709.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR005828|IPR016196|IPR020846	General substrate transporter|Major facilitator superfamily domain|Major facilitator superfamily domain, general substrate transporter	GO:0016021|GO:0022857|GO:0055085	G3DSA:1.20.1250.20|PF00083|PS50850|PTHR24063|SSF103473
yaaW|yaaW|AP_000675.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR021150|IPR025217	Domain of unknown function DUF3944|Ubiquinol-cytochrome c chaperone/UPF0174		PF03981|PF13099
yaaX|yaaX|AP_000669.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR019638	Protein of unknown function DUF2502		PF10697
yaaY|yaaY|AP_000688.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR020105	Uncharacterised protein family YaaY		PD056390|PF10837
yabI|yabI|AP_000729.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR015414	SNARE associated Golgi protein		PF09335|PTHR30353|PTHR30353:SF0
yabQ|yabQ|AP_000721.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091				PD051027
yacC|yacC|AP_000783.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR019114	Chaperone lipoprotein, PulS/OutS-like		PD074041|PF09691
yacF|yacF|AP_000764.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR009777|IPR027462	Cell division protein ZapD|Z ring-associated protein D, C-terminal domain		G3DSA:1.10.3900.10|G3DSA:2.60.440.10|MF_01092|PF07072|SSF160950
yacG|yacG|AP_000763.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR005584|IPR013088	DNA gyrase inhibitor YacG|Zinc finger, NHR/GATA-type	GO:0006355|GO:0008270	G3DSA:3.30.50.10|MF_00649|PF03884|SSF57716
yacH|yacH|AP_000778.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR021728	Protein of unknown function DUF3300		PF11737|PTHR30064|PTHR30064:SF0
yacL|yacL|AP_000780.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR008249	Uncharacterised protein family UPF0231		MF_01053|PD020773|PF06062|PIRSF006287
yadB|yadB|AP_000805.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000924|IPR014729|IPR020058|IPR022380	Glutamyl-Q tRNA(Asp) synthetase|Glutamyl/glutaminyl-tRNA synthetase, class Ib|Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain|Rossmann-like alpha/beta/alpha sandwich fold	GO:0000166|GO:0005524|GO:0005737|GO:0006400|GO:0016876|GO:0043039	G3DSA:3.40.50.620|MF_01428|PF00749|PR00987|PTHR10119|PTHR10119:SF14|SSF52374|TIGR03838
yadC|yadC|AP_000796.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000259|IPR008966|IPR017014	Adhesion domain|Fimbrial-like protein YadC|Fimbrial-type adhesion domain	GO:0007155|GO:0009289	G3DSA:2.60.40.1090|PF00419|PIRSF033053|SSF49401
yadD|yadD|AP_000793.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR006842|IPR010106	Conserved hypothetical protein CHP01784|Transposase (putative), YhgA-like		PF04754|TIGR01784
yadE|yadE|AP_000791.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002509|IPR011330	Glycoside hydrolase/deacetylase, beta/alpha-barrel|Polysaccharide deacetylase	GO:0003824|GO:0005975|GO:0016810	G3DSA:3.20.20.370|PF01522|SSF88713
yadG|yadG|AP_000788.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003439|IPR003593|IPR017871|IPR027417	AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase	GO:0000166|GO:0005524|GO:0016887|GO:0017111	G3DSA:3.40.50.300|PF00005|PS00211|PS50893|PTHR24220|PTHR24220:SF0|SM00382|SSF52540
yadH|yadH|AP_000789.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000412|IPR013525|IPR013526	ABC-2|ABC-2 transporter|ABC-2 type transporter	GO:0005215|GO:0005524|GO:0006810|GO:0016020|GO:0042626	PF01061|PIRSF006648|PR00164|PS51012|PTHR30413
yadI|yadI|AP_000790.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004701	Phosphotransferase system, fructose subfamily IIA component	GO:0009401|GO:0016021	G3DSA:3.40.50.510|PF03610|PS51096|SSF53062
yadK|yadK|AP_000797.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000259|IPR008966	Adhesion domain|Fimbrial-type adhesion domain	GO:0007155|GO:0009289	G3DSA:2.60.40.1090|PF00419|SSF49401
yadL|yadL|AP_000798.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000259|IPR008966	Adhesion domain|Fimbrial-type adhesion domain	GO:0007155|GO:0009289	G3DSA:2.60.40.1090|PF00419|SSF49401
yadM|yadM|AP_000799.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000259|IPR008966	Adhesion domain|Fimbrial-type adhesion domain	GO:0007155|GO:0009289	G3DSA:2.60.40.1090|PF00419|SSF49401
yadN|yadN|AP_000802.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000259|IPR008966	Adhesion domain|Fimbrial-type adhesion domain	GO:0007155|GO:0009289	G3DSA:2.60.40.1090|PF00419|SSF49401
yadR|yadR|AP_000817.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000361|IPR016092|IPR017870|IPR023063	FeS cluster biogenesis|FeS cluster insertion ErpA|FeS cluster insertion protein|FeS cluster insertion, C-terminal, conserved site	GO:0005198|GO:0016226|GO:0051536	G3DSA:2.60.300.12|MF_01380|PF01521|PS01152|PTHR10072|SSF89360|TIGR00049
yadS|yadS|AP_000818.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR005115	Uncharacterised domain UPF0126		PF03458|PTHR30506|PTHR30506:SF0
yaeB|yaeB|AP_000856.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001378|IPR023368|IPR023370	Uncharacterised domain UPF0066|Uncharacterised domain UPF0066, YaeB-like domain|Uncharacterised protein family UPF0066, conserved site		G3DSA:2.40.30.70|PF01980|PS01318|PTHR12818|SSF118196|TIGR00104
yaeF|yaeF|AP_000854.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091				G3DSA:2.30.30.330|PF05708|PS51257|SSF54001
yaeH|yaeH|AP_000824.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR020911	Uncharacterised protein family UPF0325		MF_01519|PD080106|PF11944
yaeI|yaeI|AP_000825.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004843	Metallophosphoesterase domain	GO:0016787	G3DSA:3.60.21.10|PF00149|SSF56300
yaeJ|yaeJ|AP_000852.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000352	Peptide chain release factor class I/class II	GO:0003747|GO:0006415	G3DSA:3.30.160.200|PF00472|PS00745|PTHR11075|PTHR11075:SF31|SSF75620
yaeL|yaeL|AP_000836.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001478|IPR004387|IPR008915	PDZ domain|Peptidase M50|Peptidase M50, putative membrane-associated zinc metallopeptidase	GO:0004222|GO:0005515|GO:0006508|GO:0016021	G3DSA:2.30.42.10|PF00595|PF02163|PS50106|PTHR22939|PTHR22939:SF62|SM00228|SSF50156|TIGR00054
yaeP|yaeP|AP_000850.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR009624	Uncharacterised protein family UPF0253		MF_01064|PD054643|PF06786
yaeQ|yaeQ|AP_000851.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR009822|IPR011335	Restriction endonuclease  type II-like|YaeQ		G3DSA:3.10.640.10|PF07152|PIRSF011484|SSF52980
yaeR|yaeR|AP_000847.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004360	Glyoxalase/fosfomycin resistance/dioxygenase domain		G3DSA:3.10.180.10|PF00903|SSF54593
yaeT|yaeT|AP_000837.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000184|IPR010827|IPR023707	Bacterial surface antigen (D15)|Outer membrane protein assembly factor BamA|Surface antigen variable number	GO:0019867	G3DSA:2.40.160.50|MF_01430|PF01103|PF07244|PIRSF006076|PTHR12815|PTHR12815:SF6|TIGR03303
yafC|yafC|AP_000863.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000847|IPR005119|IPR011991	LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain	GO:0003700|GO:0006355	G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PR00039|PTHR32459|PTHR32459:SF0|SSF46785|SSF53850
yafD|yafD|AP_000864.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR005135|IPR022958	Endonuclease/exonuclease/phosphatase|Uncharacterised protein family UPF0294		G3DSA:3.60.10.10|MF_01119|PF03372|SSF56219
yafE|yafE|AP_000865.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR013216	Methyltransferase type 11	GO:0008152|GO:0008168	G3DSA:3.40.50.150|PF08241|PTHR10108|PTHR10108:SF252|SSF53335
yafF|yafF|AP_000873.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091				PTHR30298
yafJ|yafJ|AP_000878.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR017932|IPR026869	Glutamine amidotransferase type 2 domain|Putative glutamine amidotransferase type 2		G3DSA:3.60.20.10|PF13230|PS51278|PTHR30284|SSF56235
yafK|yafK|AP_000879.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR005490	L,D-transpeptidase catalytic domain	GO:0016740	G3DSA:2.40.440.10|PF03734|SSF141523
yafL|yafL|AP_000882.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000064	Endopeptidase, NLPC/P60 domain		G3DSA:3.90.1720.10|PF00877|PTHR21666|PTHR21666:SF1|SSF54001
yafM|yafM|AP_000883.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002686	Transposase IS200-like	GO:0003677|GO:0004803|GO:0006313	G3DSA:3.30.70.1290|SSF143422
yafN|yafN|AP_000885.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR006442	Type II toxin-antitoxin system, antitoxin Phd/YefM		PF02604|SSF143120
yafO|yafO|AP_000886.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR020353	Toxin YafO		PD082093|PF13957
yafP|yafP|AP_000887.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000182|IPR016181	Acyl-CoA N-acyltransferase|GNAT domain	GO:0008080	G3DSA:3.40.630.30|PF00583|PS51186|SSF55729
yafQ|yafQ|AP_000880.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004386|IPR007712	Toxin-antitoxin system, RelE/ParE toxin family|Toxin-antitoxin system, YafQ-like toxin		PIRSF006156|SSF143011|TIGR00053|TIGR02385
yafS|yafS|AP_000868.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR013216	Methyltransferase type 11	GO:0008152|GO:0008168	G3DSA:3.40.50.150|PF08241|PTHR10108|PTHR10108:SF372|SSF53335
yafT|yafT|AP_000871.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091				PS51257
yafU|yafU|AP_000872.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091				
yafV|yafV|AP_000874.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003010	Carbon-nitrogen hydrolase	GO:0006807|GO:0016810	G3DSA:3.60.110.10|PF00795|PTHR23088|PTHR23088:SF0|SSF56317
yafW|yafW|AP_000898.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR009320	YagB/YeeU/YfjZ		G3DSA:3.30.450.20|PF06154|SSF143737
yafX|yafX|AP_000901.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004914	Antirestriction protein		PD012854|PF03230|PTHR30066|PTHR30066:SF0
yafY|yafY|AP_000904.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001034|IPR011991|IPR018356	HTH DeoR N-terminal domain|Transcription regulator, HTH DeoR-type, conserved site|Winged helix-turn-helix DNA-binding domain	GO:0003700|GO:0005622|GO:0006355	G3DSA:1.10.10.10|PF08220|PS00894|PS51000
yafZ|yafZ|AP_000905.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR026325	Protein of unknown function DUF932		PF06067|PTHR30066|PTHR30066:SF0
yagA|yagA|AP_000921.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001584|IPR009057|IPR012337	Homeodomain-like|Integrase, catalytic core|Ribonuclease H-like domain	GO:0003676|GO:0003677|GO:0015074	G3DSA:1.10.10.60|G3DSA:3.30.420.10|PF00665|PF13565|PS50994|PTHR10178|PTHR10178:SF25|SSF46689|SSF53098
yagB|yagB|AP_000920.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR009320	YagB/YeeU/YfjZ		G3DSA:3.30.450.20|PF06154|SSF143737
yagE|yagE|AP_000922.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002220|IPR013785|IPR020624|IPR020625	Aldolase-type TIM barrel|Dihydrodipicolinate synthetase, active site|Dihydrodipicolinate synthetase, conserved site|Dihydrodipicolinate synthetase-like	GO:0003824|GO:0008152|GO:0016829	G3DSA:3.20.20.70|PF00701|PIRSF001365|PR00146|PS00665|PS00666|PTHR12128|PTHR12128:SF10|SSF51569
yagF|yagF|AP_000923.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000581|IPR015928|IPR017798|IPR020558	Aconitase/3-isopropylmalate dehydratase, swivel|Dehydratase, YjhG/YagF, putative|Dihydroxy-acid/6-phosphogluconate dehydratase|Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site	GO:0003824|GO:0008152	PF00920|PS00886|PS00887|PTHR21000|SSF143975|SSF52016|TIGR03432
yagG|yagG|AP_000924.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001927|IPR016196|IPR018043	Major facilitator superfamily domain, general substrate transporter|Sodium:galactoside symporter|Sodium:galactoside symporter, conserved site	GO:0005215|GO:0006814|GO:0016020	G3DSA:1.20.1250.20|PF13347|PS00872|PTHR32425|PTHR32425:SF4|SSF103473|TIGR00792
yagH|yagH|AP_000925.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR006710|IPR008985|IPR009784|IPR013320|IPR023296	Concanavalin A-like lectin/glucanase, subgroup|Concanavalin A-like lectin/glucanases superfamily|Glycoside hydrolase, family 43|Glycosyl hydrolase, five-bladed beta-propellor domain|Protein of unknown function DUF1349	GO:0004553|GO:0005975	G3DSA:2.115.10.20|G3DSA:2.60.120.200|PF04616|PF07081|PTHR22925|PTHR22925:SF11|SSF49899|SSF75005
yagI|yagI|AP_000926.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR005471|IPR011991|IPR014757	Transcription regulator IclR, C-terminal|Transcription regulator IclR, N-terminal|Winged helix-turn-helix DNA-binding domain	GO:0003677|GO:0006355	G3DSA:1.10.10.10|G3DSA:3.30.450.40|PF01614|PF09339|PS51077|PS51078|PTHR30136|PTHR30136:SF0|SM00346|SSF46785|SSF55781
yagJ|yagJ|AP_000930.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091				
yagK|yagK|AP_000931.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR021723	Inovirus Gp2		PF11726
yagL|yagL|AP_000932.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR006119|IPR011991	Resolvase, N-terminal|Winged helix-turn-helix DNA-binding domain	GO:0000150|GO:0003677|GO:0006310	G3DSA:1.10.10.10|G3DSA:3.40.50.1390|PF00239|PF13412|SSF53041
yagM|yagM|AP_000933.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR016513	Uncharacterised conserved protein UCP007319		PIRSF007319
yagP|yagP|AP_000936.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR005119	LysR, substrate-binding		G3DSA:3.40.190.10|PF03466|PTHR32459|PTHR32459:SF0|SSF53850
yagQ|yagQ|AP_000937.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003777|IPR027051	XdhC Rossmann domain|XdhC- CoxI		PF02625|PF13478|PTHR30388|PTHR30388:SF0
yagR|yagR|AP_000938.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000674|IPR008274	Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead|Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding	GO:0016491|GO:0055114	G3DSA:3.30.365.10|G3DSA:3.90.1170.50|PF01315|PF02738|PTHR11908|PTHR11908:SF4|SM01008|SSF54665|SSF56003
yagS|yagS|AP_000939.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002346|IPR005107|IPR016166|IPR016167|IPR016169	CO dehydrogenase flavoprotein, C-terminal|CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2|FAD-binding, type 2|FAD-binding, type 2, subdomain 1|Molybdopterin dehydrogenase, FAD-binding	GO:0003824|GO:0008762|GO:0016491|GO:0016614|GO:0050660|GO:0055114	G3DSA:3.30.390.50|G3DSA:3.30.43.10|G3DSA:3.30.465.10|PF00941|PF03450|PS51387|PTHR11908|PTHR11908:SF31|SM01092|SSF55447|SSF56176
yagT|yagT|AP_000940.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001041|IPR002888|IPR006058|IPR006311|IPR012675	2Fe-2S ferredoxin, iron-sulphur binding site|2Fe-2S ferredoxin-type domain|Beta-grasp domain|Twin-arginine translocation pathway, signal sequence|[2Fe-2S]-binding	GO:0009055|GO:0016491|GO:0046872|GO:0051536|GO:0051537|GO:0055114	G3DSA:1.10.150.120|G3DSA:3.10.20.30|PF00111|PF01799|PS00197|PS51085|PS51318|PTHR11908|PTHR11908:SF16|SSF47741|SSF54292
yagU|yagU|AP_000941.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR009898	Protein of unknown function DUF1440		PF07274
yagV|yagV|AP_000943.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR008962|IPR016147	PapD-like|Pili assembly chaperone, N-terminal, bacterial	GO:0030288|GO:0071555	PF00345|SSF49354
yagW|yagW|AP_000944.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091				
yagX|yagX|AP_000945.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR008969|IPR014766	Carboxypeptidase, regulatory domain|Carboxypeptidase-like, regulatory domain		G3DSA:2.60.40.1120|SSF49464
yagY|yagY|AP_000946.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR008962	PapD-like		SSF49354
yagZ|yagZ|AP_000947.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR016514	Fimbrillin, MatB		PIRSF007320
yahA|yahA|AP_000968.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000792|IPR001633|IPR011991|IPR016032	Diguanylate phosphodiesterase, EAL domain|Signal transduction response regulator, C-terminal effector|Transcription regulator LuxR, C-terminal|Winged helix-turn-helix DNA-binding domain	GO:0003677|GO:0003700|GO:0005622|GO:0006355|GO:0043565	G3DSA:1.10.10.10|G3DSA:3.20.20.450|PF00196|PF00563|PS50043|PS50883|PTHR30394|PTHR30394:SF0|SM00052|SM00421|SSF141868|SSF46894
yahB|yahB|AP_000969.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000847|IPR005119|IPR011991	LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain	GO:0003700|GO:0006355	G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PS50931|PTHR32459|PTHR32459:SF0|SSF46785|SSF53850
yahC|yahC|AP_000970.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR009476	Protein of unknown function DUF1097		PF06496
yahD|yahD|AP_000971.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002110|IPR020683	Ankyrin repeat|Ankyrin repeat-containing domain	GO:0005515	G3DSA:1.25.40.20|PF00023|PS50088|PS50297|PTHR24193|SM00248|SSF48403
yahE|yahE|AP_000972.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR021530	Protein of unknown function DUF2877		PF11392
yahF|yahF|AP_000973.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003781|IPR005811|IPR016102	ATP-citrate lyase/succinyl-CoA ligase|CoA-binding|Succinyl-CoA synthetase-like	GO:0003824|GO:0008152|GO:0048037	G3DSA:3.40.50.261|PF00549|PF02629|PTHR11117|SSF52210
yahG|yahG|AP_000974.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR009499|IPR024033	Protein of unknown function DUF1116|Uncharacterised domain, YlbE		G3DSA:1.10.10.660|G3DSA:3.90.1700.10|G3DSA:3.90.1710.10|PF06545
yahI|yahI|AP_000976.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001048|IPR003964	Aspartate/glutamate/uridylate kinase|Bacterial carbamate kinase	GO:0006525|GO:0008652|GO:0008804	G3DSA:3.40.1160.10|PF00696|PIRSF000723|PR01469|PTHR30409|SSF53633
yahJ|yahJ|AP_000977.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR006311|IPR011059	Metal-dependent hydrolase, composite domain|Twin-arginine translocation pathway, signal sequence	GO:0016810	G3DSA:2.30.40.10|G3DSA:3.20.20.140|PF13147|PS51318|PTHR32027|PTHR32027:SF3|SSF51338|SSF51556
yahK|yahK|AP_000978.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002085|IPR002328|IPR006140|IPR011032|IPR013149|IPR013154|IPR016040	Alcohol dehydrogenase GroES-like|Alcohol dehydrogenase superfamily, zinc-type|Alcohol dehydrogenase, C-terminal|Alcohol dehydrogenase, zinc-type, conserved site|D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding|GroES-like|NAD(P)-binding domain	GO:0008270|GO:0016491|GO:0016616|GO:0048037|GO:0055114	G3DSA:3.40.50.720|G3DSA:3.90.180.10|PF00107|PF08240|PS00059|PS00065|PTHR11695|PTHR11695:SF261|SSF50129|SSF51735
yahN|yahN|AP_000981.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001123|IPR004778	Homoserine/Threonine efflux protein|Lysine-type exporter protein (LYSE/YGGA)	GO:0006865|GO:0016020|GO:0016021	PF01810|PIRSF006324|TIGR00949
yahO|yahO|AP_000982.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR010854|IPR025543	Dodecin-like|Domain of unknown function DUF1471		G3DSA:3.30.1660.10|PF07338|SSF159871
yaiB|yaiB|AP_001033.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR019732	Sigma-S stabilisation anti-adaptor protein	GO:0005737	MF_01198|PF10796
yaiC|yaiC|AP_001036.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000160|IPR001054|IPR007894	Adenylyl cyclase class-3/4/guanylyl cyclase|GGDEF domain|MASE2	GO:0009190|GO:0016849|GO:0035556	G3DSA:3.30.70.270|PF00990|PF05230|PS50887|SM00267|SSF55073|TIGR00254
yaiE|yaiE|AP_001042.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR009664|IPR011051|IPR014710	Protein of unknown function DUF1255|RmlC-like cupin domain|RmlC-like jelly roll fold		G3DSA:2.60.120.10|MF_01537|PF06865|SSF51182
yaiF|yaiF|AP_001013.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001451|IPR011004	Bacterial transferase hexapeptide repeat|Trimeric LpxA-like	GO:0016740	G3DSA:2.160.10.10|PF00132|SSF51161
yaiI|yaiI|AP_001038.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003791	Protein of unknown function UPF0178		MF_00489|PF02639
yaiL|yaiL|AP_001006.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR018636	Protein of unknown function DUF2058		PF09831
yaiO|yaiO|AP_001010.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR016504	Uncharacterised conserved protein UCP007027		PIRSF007027
yaiP|yaiP|AP_001014.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001173	Glycosyl transferase, family 2		G3DSA:3.90.550.10|PF00535|PTHR10859|PTHR10859:SF47|SSF53448
yaiS|yaiS|AP_001015.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003737|IPR024078	N-acetylglucosaminyl phosphatidylinositol deacetylase|Putative deacetylase LmbE-like domain		G3DSA:3.40.50.10320|PF02585|PTHR12993|PTHR12993:SF1|SSF102588
yaiT|yaiT|AP_001022.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR011050	Pectin lyase fold/virulence factor		SSF51126
yaiU|yaiU|AP_001025.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003991|IPR004899|IPR005546|IPR006315|IPR011050	Autotransporter beta-domain|Outer membrane autotransporter barrel|Pectin lyase fold/virulence factor|Pertactin virulence factor family|Pertactin, central region	GO:0007155|GO:0019867	G3DSA:2.40.128.130|PF03212|PF03797|PR01484|PS51208|SM00869|SSF103515|SSF51126|TIGR01414
yaiV|yaiV|AP_001026.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR018490	Cyclic nucleotide-binding-like		SSF51206
yaiW|yaiW|AP_001029.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR011673	Protein of unknown function DUF1615		PD041438|PF07759|PS51257
yaiY|yaiY|AP_001030.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR020513	Uncharacterised protein family, inner membrane YaiY	GO:0016021	PD068630|PF10954
yaiZ|yaiZ|AP_001031.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR020490	Uncharacterised protein family YaiZ		PD073772|PF10953
yajB|yajB|AP_001054.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR007431|IPR023491	Acyl carrier protein phosphodiesterase|Acyl carrier protein phosphodiesterase, gammaproteobacteria	GO:0006633|GO:0008770	MF_01950|PF04336|PIRSF011489
yajC|yajC|AP_001057.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003849	Preprotein translocase YajC		PF02699|PR01853|TIGR00739
yajD|yajD|AP_001060.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002711|IPR003615|IPR015880	HNH endonuclease|HNH nuclease|Zinc finger, C2H2-like	GO:0003676|GO:0004519	PF01844|SM00355|SM00507
yajG|yajG|AP_001084.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR005619|IPR012640	Membrane lipoprotein, lipid attachment site|Uncharacterised protein family, YajG		PF03923|PF08139|PS51257
yajI|yajI|AP_001062.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR021658	Domain of unknown function DUF3251		G3DSA:2.60.40.1620|PF11622|PS51257
yajL|yajL|AP_001074.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002818|IPR006287	DJ-1|ThiJ/PfpI		G3DSA:3.40.50.880|PF01965|PTHR11019|PTHR11019:SF6|SSF52317|TIGR01383
yajO|yajO|AP_001069.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001395|IPR020471|IPR023210	Aldo/keto reductase|Aldo/keto reductase subgroup|NADP-dependent oxidoreductase domain	GO:0016491|GO:0055114	G3DSA:3.20.20.100|PF00248|PR00069|PTHR11732|PTHR11732:SF93|SSF51430
yajQ|yajQ|AP_001076.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR007551	Protein of unknown function DUF520		G3DSA:3.30.70.860|G3DSA:3.30.70.990|MF_00632|PF04461|PTHR30476|PTHR30476:SF0|SSF89963
yajR|yajR|AP_001077.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR011701|IPR016196|IPR020846	Major facilitator superfamily|Major facilitator superfamily domain|Major facilitator superfamily domain, general substrate transporter	GO:0016021|GO:0055085	G3DSA:1.20.1250.20|PF07690|PS50850|PTHR24003|SSF103473
ybaA|ybaA|AP_001105.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR009874|IPR011008	Dimeric alpha-beta barrel|Protein of unknown function DUF1428		G3DSA:3.30.70.900|PF07237|PIRSF007028|SSF54909
ybaB|ybaB|AP_001120.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004401	Nucleoid-associated protein YbaB		G3DSA:3.30.1310.10|MF_00274|PF02575|PIRSF004555|SSF82607|TIGR00103
ybaD|ybaD|AP_001063.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003796|IPR005144	ATP-cone|Ribonucleotide reductase regulator NrdR-like	GO:0008270|GO:0045892	MF_00440|PF03477|PS51161|PTHR30455|PTHR30455:SF0|TIGR00244
ybaE|ybaE|AP_001095.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000914|IPR025370	Bacterial extracellular solute-binding protein, family 5|Transcriptional regulator SgrR, N-terminal HTH domain	GO:0005215|GO:0006810	G3DSA:3.10.105.10|G3DSA:3.90.76.10|PF00496|PF12793|PTHR30512|PTHR30512:SF0|SSF53850
ybaJ|ybaJ|AP_001110.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR019693	Biofilm formation regulator YbaJ		PF10757
ybaK|ybaK|AP_001130.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004369|IPR007214	Prolyl-tRNA editing protein, YbaK/EbsC|YbaK/aminoacyl-tRNA synthetase-associated domain	GO:0002161	G3DSA:3.90.960.10|PF04073|PIRSF006181|PTHR30411|PTHR30411:SF0|SSF55826|TIGR00011
ybaL|ybaL|AP_001127.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003148|IPR004771|IPR006153|IPR016040	Cation/H+ exchanger|K+/H+ exchanger|NAD(P)-binding domain|Regulator of K+ conductance, N-terminal	GO:0006812|GO:0006813|GO:0008324|GO:0015299|GO:0016021|GO:0055085	G3DSA:3.40.50.720|PF00999|PF02254|PTHR16254|SSF51735|TIGR00932
ybaM|ybaM|AP_001115.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR019630	Protein of unknown function DUF2496, YbaM-related		PF10689
ybaN|ybaN|AP_001117.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR007401	Protein of unknown function DUF454		PF04304|PIRSF016789
ybaO|ybaO|AP_001097.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000485|IPR011008|IPR011991|IPR019885|IPR019887|IPR019888	AsnC-type HTH domain|Dimeric alpha-beta barrel|Transcription regulator AsnC-type|Transcription regulator AsnC-type, C-terminal|Transcription regulator HTH, AsnC-type, conserved site|Winged helix-turn-helix DNA-binding domain	GO:0003700|GO:0005622|GO:0006355|GO:0043565	G3DSA:1.10.10.10|G3DSA:3.30.70.920|PF01037|PF13404|PR00033|PS00519|PS50956|PTHR30154|PTHR30154:SF0|SM00344|SSF46785|SSF54909
ybaP|ybaP|AP_001131.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002816	Pheromone shutdown, TraB		PF01963
ybaQ|ybaQ|AP_001132.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001387|IPR010982|IPR013430	Helix-turn-helix|Lambda repressor-like, DNA-binding domain|Toxin-antitoxin system, antidote protein, HigA	GO:0003677|GO:0043565	G3DSA:1.10.260.40|PF01381|PS50943|SM00530|SSF47413|TIGR02607
ybaS|ybaS|AP_001134.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR012338|IPR015868	Beta-lactamase/transpeptidase-like|Glutaminase	GO:0004359|GO:0006541	G3DSA:3.40.710.10|MF_00313|PF04960|PTHR12544|PTHR12544:SF2|SSF56601|TIGR03814
ybaT|ybaT|AP_001135.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002293	Amino acid/polyamine transporter I	GO:0003333|GO:0015171|GO:0016020	PF13520|PIRSF006060|PTHR11785|PTHR11785:SF51
ybaV|ybaV|AP_001092.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003583|IPR004509|IPR010994	Competence protein ComEA, helix-hairpin-helix domain|Helix-hairpin-helix DNA-binding motif, class 1|RuvA domain 2-like	GO:0003677|GO:0006281	G3DSA:1.10.150.280|PF12836|PTHR21180|PTHR21180:SF19|SM00278|SSF47781|TIGR00426
ybaW|ybaW|AP_001093.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR006683|IPR006684	Acyl-CoA thioester hydrolase YbgC/YbaW family|Thioesterase superfamily	GO:0016787	G3DSA:3.10.129.10|PF03061|SSF54637|TIGR00051
ybaX|ybaX|AP_001094.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001518|IPR014729|IPR018317	Argininosuccinate synthase|Queuosine biosynthesis protein QueC|Rossmann-like alpha/beta/alpha sandwich fold	GO:0004055|GO:0005524|GO:0006526	G3DSA:3.40.50.620|MF_01633|PF06508|PIRSF006293|PTHR11587|SSF52402|TIGR00364
ybaY|ybaY|AP_001103.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091				PF09619|PS51257
ybaZ|ybaZ|AP_001104.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR011991|IPR014048	Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding|Winged helix-turn-helix DNA-binding domain	GO:0003824|GO:0006281	G3DSA:1.10.10.10|PF01035|PTHR10815|PTHR10815:SF0|SSF46767|TIGR00589
ybbA|ybbA|AP_001144.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003439|IPR003593|IPR017871|IPR027417	AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase	GO:0000166|GO:0005524|GO:0016887|GO:0017111	G3DSA:3.40.50.300|PF00005|PS00211|PS50893|PTHR24220|PTHR24220:SF111|SM00382|SSF52540
ybbB|ybbB|AP_001151.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001763|IPR017582	Rhodanese-like domain|tRNA 2-selenouridine synthase	GO:0016785|GO:0043828|GO:0070329	G3DSA:3.40.250.10|MF_01622|PF00581|PS50206|PTHR30401|SM00450|SSF52821|TIGR03167
ybbC|ybbC|AP_001147.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091				
ybbD|ybbD|AP_001149.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091				
ybbJ|ybbJ|AP_001137.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002810|IPR012340	NfeD-like, C-terminal domain|Nucleic acid-binding, OB-fold		G3DSA:2.40.50.140|PF01957|SSF141322
ybbK|ybbK|AP_001138.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001107|IPR001972|IPR018080	Band 7 protein|Band 7/stomatin-like, conserved site|Stomatin	GO:0016020	PF01145|PR00721|PS01270|PTHR10264|PTHR10264:SF27|SM00244|SSF117892
ybbL|ybbL|AP_001139.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003439|IPR003593|IPR017871|IPR027417	AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase	GO:0000166|GO:0005524|GO:0016887|GO:0017111	G3DSA:3.40.50.300|PF00005|PS00211|PS50893|PTHR24220|PTHR24220:SF32|SM00382|SSF52540
ybbM|ybbM|AP_001140.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR005226	Conserved hypothetical protein CHP00245		PF03649|PTHR30028|PTHR30028:SF0|TIGR00245
ybbN|ybbN|AP_001141.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR005746|IPR011990|IPR012336|IPR013766	Tetratricopeptide-like helical|Thioredoxin|Thioredoxin domain|Thioredoxin-like fold	GO:0005515|GO:0006662|GO:0009055|GO:0015035|GO:0045454	G3DSA:1.25.40.10|G3DSA:3.40.30.10|PF00085|PS51352|PTHR10438|PTHR10438:SF125|SSF48452|SSF52833
ybbO|ybbO|AP_001142.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002198|IPR002347|IPR016040|IPR020904	Glucose/ribitol dehydrogenase|NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR|Short-chain dehydrogenase/reductase, conserved site	GO:0008152|GO:0016491	G3DSA:3.40.50.720|PF00106|PR00081|PS00061|PTHR24322|PTHR24322:SF39|SSF51735
ybbP|ybbP|AP_001145.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003838	Permease FtsX-like	GO:0016020	PF02687|PS51257|PTHR30287|PTHR30287:SF0
ybbS|ybbS|AP_001152.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000847|IPR005119|IPR011991	LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain	GO:0003700|GO:0006355	G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PS50931|PTHR32389|SSF46785|SSF53850
ybbV|ybbV|AP_001158.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091				
ybbW|ybbW|AP_001159.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001248|IPR012681	Nucleobase cation symporter-1, NCS1|Permease, cytosine/purines, uracil, thiamine, allantoin	GO:0005215|GO:0006810|GO:0015205|GO:0015851|GO:0016020	PF02133|PTHR30618|PTHR30618:SF0|TIGR00800
ybbY|ybbY|AP_001161.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR006043	Xanthine/uracil/vitamin C permease	GO:0005215|GO:0006810|GO:0016020|GO:0055085	PF00860|PTHR11119|PTHR11119:SF4
ybcC|ybcC|AP_001184.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR011335|IPR011604	Exonuclease, phage-type/RecB, C-terminal|Restriction endonuclease  type II-like	GO:0003677|GO:0004518	G3DSA:3.90.320.10|SSF52980
ybcF|ybcF|AP_001168.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001048|IPR003964	Aspartate/glutamate/uridylate kinase|Bacterial carbamate kinase	GO:0006525|GO:0008652|GO:0008804	G3DSA:3.40.1160.10|PF00696|PIRSF000723|PR01469|PTHR30409|SSF53633|TIGR00746
ybcH|ybcH|AP_001212.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091				
ybcI|ybcI|AP_001174.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR007404	Protein of unknown function DUF457		PF04307|PTHR30515|PTHR30515:SF0
ybcJ|ybcJ|AP_001175.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002942	RNA-binding S4 domain	GO:0003723	G3DSA:3.10.290.10|PF13275|PS50889|SSF55174
ybcK|ybcK|AP_001189.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR006119|IPR011109|IPR025827	Recombinase|Recombinase zinc beta ribbon domain|Resolvase, N-terminal	GO:0000150|GO:0003677|GO:0006310	G3DSA:3.40.50.1390|PF00239|PF07508|PF13408|SM00857|SSF53041
ybcL|ybcL|AP_001190.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR005247|IPR008914	Phosphatidylethanolamine-binding protein PEBP|YbhB/YbcL		G3DSA:3.90.280.10|PF01161|PTHR30289|PTHR30289:SF0|SSF49777|TIGR00481
ybcM|ybcM|AP_001191.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR009057|IPR018060	DNA binding HTH domain, AraC-type|Homeodomain-like	GO:0003677|GO:0003700|GO:0006355|GO:0043565	G3DSA:1.10.10.60|PF12833|PS01124|PTHR11019|PTHR11019:SF11|SM00342|SSF46689
ybcN|ybcN|AP_001192.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR008711	Recombinase NinB		G3DSA:1.10.3790.10|PD033929|SSF103370
ybcO|ybcO|AP_001194.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR010774	Protein of unknown function DUF1364		G3DSA:3.30.50.20|PF07102
ybcQ|ybcQ|AP_001197.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR010534	Bacteriophage 933W, GpQ	GO:0003677|GO:0060567	PF06530
ybcS|ybcS|AP_001200.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002196|IPR023346|IPR023347	Glycoside hydrolase, family 24|Lysozyme domain|Lysozyme-like domain	GO:0003796|GO:0009253|GO:0016998	G3DSA:1.10.530.40|PF00959|SSF53955
ybcV|ybcV|AP_001204.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR009833	Bacteriophage DE3, Orf10033		G3DSA:3.30.1810.10|PD021249|PF07166|SSF160419
ybcY|ybcY|AP_001207.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR016584	S-adenosyl-L-methionine dependent methyltransferase, YbcY, predicted		G3DSA:3.40.50.150|PF13489|PIRSF011491|SSF53335
ybdA|ybdA|AP_001238.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR010290|IPR016196|IPR020846|IPR023722	Enterobactin exporter, EntS|Major facilitator superfamily domain|Major facilitator superfamily domain, general substrate transporter|Transmembrane secretion effector	GO:0005886|GO:0042930|GO:0042931	G3DSA:1.20.1250.20|MF_01436|PF05977|PS50850|PTHR24003|SSF103473
ybdB|ybdB|AP_001244.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003736|IPR006683|IPR026576	Phenylacetic acid degradation-related domain|Proofreading thioesterase EntH|Thioesterase superfamily	GO:0009239|GO:0016790	G3DSA:3.10.129.10|MF_00907|PF03061|PTHR12418|PTHR12418:SF4|SSF54637|TIGR00369
ybdD|ybdD|AP_001246.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR007423	Protein of unknown function DUF466		PF04328
ybdF|ybdF|AP_001224.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR007351	Protein of unknown function DUF419		PF04237|SSF142906
ybdG|ybdG|AP_001222.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR006685|IPR010920|IPR011066	Like-Sm (LSM) domain|Mechanosensitive ion channel MscS|Mechanosensitive ion channel MscS, C-terminal	GO:0016020|GO:0055085	G3DSA:2.30.30.60|PF00924|PTHR30414|PTHR30414:SF0|SSF50182|SSF82689
ybdH|ybdH|AP_001247.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001670|IPR016205|IPR018211	Alcohol dehydrogenase, iron-type|Alcohol dehydrogenase, iron-type, conserved site|Glycerol dehydrogenase	GO:0016491|GO:0016614|GO:0046872|GO:0055114	G3DSA:1.20.1090.10|G3DSA:3.40.50.1970|PF00465|PIRSF000112|PS00913|PTHR11496|SSF56796
ybdJ|ybdJ|AP_001225.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR010590	Protein of unknown function DUF1158		PD027061|PF06643|PS51257
ybdK|ybdK|AP_001226.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR006336|IPR011793	Carboxylate-amine ligase, predicted|Glutamate--cysteine ligase, GCS2	GO:0004357|GO:0016879|GO:0042398	MF_01609|PF04107|SSF55931|TIGR02050
ybdL|ybdL|AP_001248.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004839|IPR015421|IPR015422|IPR015424	Aminotransferase, class I/classII|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2	GO:0003824|GO:0009058|GO:0030170	G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF00155|PTHR11751|PTHR11751:SF37|SSF53383
ybdM|ybdM|AP_001249.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003115	ParB-like nuclease	GO:0003677	G3DSA:3.90.1530.10|PF02195|PTHR30083|SM00470|SSF110849
ybdN|ybdN|AP_001250.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002500|IPR014729|IPR021845	Phosphoadenosine phosphosulphate reductase|Protein of unknown function DUF3440|Rossmann-like alpha/beta/alpha sandwich fold	GO:0003824|GO:0008152	G3DSA:3.40.50.620|PF01507|PF11922|PTHR30083|SSF52402
ybdO|ybdO|AP_001251.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000847|IPR005119|IPR011991	LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain	GO:0003700|GO:0006355	G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PR00039|PS50931|PTHR30118|SSF46785|SSF53850
ybdR|ybdR|AP_001256.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002085|IPR002328|IPR011032|IPR013149|IPR013154|IPR016040|IPR027399	Alcohol dehydrogenase GroES-associated N-terminal domain|Alcohol dehydrogenase GroES-like|Alcohol dehydrogenase superfamily, zinc-type|Alcohol dehydrogenase, C-terminal|Alcohol dehydrogenase, zinc-type, conserved site|GroES-like|NAD(P)-binding domain	GO:0008270|GO:0016491|GO:0055114	G3DSA:3.40.50.720|G3DSA:3.90.180.10|PF00107|PF08240|PF13823|PS00059|PTHR11695|PTHR11695:SF281|SSF50129|SSF51735
ybdZ|ybdZ|AP_001232.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR005153|IPR015166	MbtH-like protein|Protein of unknown function DUF1922		G3DSA:3.90.820.10|PF03621|SM00923|SSF160582
ybeA|ybeA|AP_001285.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003742|IPR016051	Ribosomal RNA large subunit methyltransferase H|SPOUT methyltransferase, predicted	GO:0005737|GO:0006364|GO:0008168|GO:0031167	G3DSA:3.40.1280.10|MF_00658|PF02590|PIRSF004505|SSF75217|TIGR00246
ybeB|ybeB|AP_001286.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004394|IPR025656	Oligomerisation domain|Protein Iojap/ribosomal silencing factor RsfS		G3DSA:3.30.460.10|MF_01477|PF02410|PTHR21043|PTHR21043:SF0|SSF81301|TIGR00090
ybeD|ybeD|AP_001280.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR007454|IPR027471	Uncharacterised protein family UPF0250|YbeD-like domain		G3DSA:3.30.70.1460|MF_00659|PF04359|SSF117991
ybeF|ybeF|AP_001278.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000847|IPR005119|IPR011991	LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain	GO:0003700|GO:0006355	G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PS50931|PTHR30118|SSF46785|SSF53850
ybeH|ybeH|AP_001274.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003010	Carbon-nitrogen hydrolase	GO:0006807|GO:0016810	G3DSA:3.60.110.10|SSF56317
ybeL|ybeL|AP_001292.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR009912	Protein of unknown function DUF1451		PF07295
ybeM|ybeM|AP_001275.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001110|IPR003010	Carbon-nitrogen hydrolase|Uncharacterised protein family UPF0012, conserved site	GO:0006807|GO:0016810	G3DSA:3.60.110.10|PF00795|PS01227|PS50263|PTHR23088|PTHR23088:SF0|SSF56317
ybeQ|ybeQ|AP_001293.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR006597|IPR011990	Sel1-like|Tetratricopeptide-like helical	GO:0005515	G3DSA:1.25.40.10|PF08238|PTHR11102|SM00671|SSF81901
ybeR|ybeR|AP_001294.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR009677	Protein of unknown function DUF1266		PF06889
ybeT|ybeT|AP_001296.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR006597|IPR011990	Sel1-like|Tetratricopeptide-like helical	GO:0005515	G3DSA:1.25.40.10|PF08238|PTHR11102|SM00671|SSF81901
ybeU|ybeU|AP_001297.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR009677	Protein of unknown function DUF1266		PF06889
ybeX|ybeX|AP_001307.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000644|IPR005170|IPR016166|IPR016169	CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2|Cystathionine beta-synthase, core|FAD-binding, type 2|Transporter-associated domain	GO:0003824|GO:0005515|GO:0016614|GO:0050660|GO:0055114	G3DSA:3.10.580.10|G3DSA:3.30.465.10|PF00571|PF03471|PS51371|PTHR22777|PTHR22777:SF0|SM00116|SM01091|SSF54631|SSF56176
ybeY|ybeY|AP_001308.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002036|IPR020549|IPR023091	Endoribonuclease YbeY|Endoribonuclease YbeY, conserved site|Metalloprotease catalytic domain, predicted	GO:0004222|GO:0006364	G3DSA:3.40.390.30|MF_00009|PF02130|PS01306|SSF55486|TIGR00043
ybeZ|ybeZ|AP_001309.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003714|IPR027417	P-loop containing nucleoside triphosphate hydrolase|PhoH-like protein	GO:0005524	G3DSA:3.40.50.300|PF02562|PTHR30473|SSF52540
ybfA|ybfA|AP_001338.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR019663	Uncharacterised protein YbfA		PF10725
ybfB|ybfB|AP_001340.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091				
ybfC|ybfC|AP_001342.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091				
ybfD|ybfD|AP_001344.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002559	Transposase, IS4-like	GO:0003677|GO:0004803|GO:0006313	PF01609|PF13808|PTHR30298
ybfE|ybfE|AP_001323.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002145|IPR010985	Ribbon-helix-helix|Ribbon-helix-helix protein, copG	GO:0006355	PF01402|SSF47598
ybfF|ybfF|AP_001324.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091				G3DSA:3.40.50.1820|PF12697|PTHR10992|PTHR10992:SF81|SSF53474
ybfG|ybfG|AP_001328.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR021239	Protein of unknown function DUF2625		PF10946
ybfH|ybfH|AP_001329.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR021239	Protein of unknown function DUF2625		PF10946
ybfM|ybfM|AP_001319.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR005318|IPR023614	Outer membrane porin, bacterial|Porin domain	GO:0006810|GO:0015288|GO:0016021	G3DSA:2.40.160.10|PF03573
ybfN|ybfN|AP_001320.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR025727	YbfN-like lipoprotein		PF13982|PS51257
ybfO|ybfO|AP_001341.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001826|IPR006530|IPR022385	RHS protein|Rhs repeat-associated core|YD repeat		PF03527|PF05593|PR00394|PTHR32305|PTHR32305:SF4|TIGR03696
ybfP|ybfP|AP_001327.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091				
ybfQ|ybfQ|AP_001343.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091				PF13808|PTHR30298
ybgA|ybgA|AP_001345.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR013560	Domain of unknown function DUF1722		PF08349|PTHR30087|PTHR30087:SF0
ybgC|ybgC|AP_001374.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR006683|IPR006684|IPR008272|IPR014166	4-hydroxybenzoyl-CoA thioesterase, active site|Acyl-CoA thioester hydrolase YbgC/YbaW family|Thioesterase superfamily|Tol-Pal system-associated acyl-CoA thioesterase	GO:0016787|GO:0016790	G3DSA:3.10.129.10|PF03061|PIRSF003230|PS01328|SSF54637|TIGR00051|TIGR02799
ybgD|ybgD|AP_001357.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000259|IPR008966	Adhesion domain|Fimbrial-type adhesion domain	GO:0007155|GO:0009289	G3DSA:2.60.40.1090|PF00419|SSF49401
ybgE|ybgE|AP_001373.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR011846	Cyd operon protein YbgE		PF09600|PS51257|TIGR02112
ybgF|ybgF|AP_001380.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR011990|IPR013026|IPR013105|IPR014162	Tetratricopeptide TPR2|Tetratricopeptide repeat-containing domain|Tetratricopeptide-like helical|Tol-Pal system, YbgF	GO:0005515	G3DSA:1.25.40.10|PF07719|PF13432|PS50293|SSF48452|TIGR02795
ybgH|ybgH|AP_001347.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000109|IPR005279|IPR016196|IPR018456|IPR020846|IPR023777	Amino acid/peptide transporter family|Amino acid/peptide transporter family, dipeptide permease D|Major facilitator superfamily domain|Major facilitator superfamily domain, general substrate transporter|PTR2 family proton/oligopeptide symporter, conserved site|Proton-dependent oligopeptide transporter family	GO:0005215|GO:0005887|GO:0006810|GO:0006857|GO:0015197|GO:0015833|GO:0016020|GO:0042938	G3DSA:1.20.1250.20|MF_01880|PF00854|PS01022|PS01023|PS50850|PTHR11654|PTHR11654:SF6|SSF103473|TIGR00924
ybgI|ybgI|AP_001348.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002678	Ngg1p interacting factor 3, NIF3		G3DSA:3.40.1390.30|PF01784|PTHR13799|SSF102705|TIGR00486
ybgJ|ybgJ|AP_001349.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002130|IPR003833|IPR010016|IPR024946	Allophanate hydrolase subunit 1|Arginine repressor C-terminal-like domain|Cyclophilin-like peptidyl-prolyl cis-trans isomerase domain|Sensor histidine kinase inhibitor, KipI family	GO:0003755|GO:0006457	G3DSA:2.40.100.10|G3DSA:3.30.1360.40|PF02682|SM00796|SSF160467|SSF50891|TIGR00370
ybgK|ybgK|AP_001350.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002130|IPR003778	Allophanate hydrolase subunit 2|Cyclophilin-like peptidyl-prolyl cis-trans isomerase domain	GO:0003755|GO:0006457	PF02626|PTHR18866|PTHR18866:SF14|SM00797|SSF50891|TIGR00724
ybgL|ybgL|AP_001351.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR005501|IPR011330	Glycoside hydrolase/deacetylase, beta/alpha-barrel|Uncharacterised protein family UPF0271, LamB/YcsF	GO:0003824|GO:0005975	MF_00691|PF03746|PTHR30292|PTHR30292:SF0|SSF88713
ybgO|ybgO|AP_001354.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000259|IPR008966	Adhesion domain|Fimbrial-type adhesion domain	GO:0007155|GO:0009289	G3DSA:2.60.40.1090|PF00419|SSF49401
ybgP|ybgP|AP_001355.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001829|IPR008962|IPR016147|IPR016148|IPR018046	PapD-like|Pili assembly chaperone, C-terminal domain|Pili assembly chaperone, N-terminal, bacterial|Pili assembly chaperone, bacterial|Pili assembly chaperone, conserved site	GO:0030288|GO:0043711|GO:0071555	G3DSA:2.60.40.1070|G3DSA:2.60.40.360|PF00345|PF02753|PR00969|PS00635|PS51257|PTHR30251|SSF49354|SSF49584
ybgQ|ybgQ|AP_001356.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000015|IPR018030|IPR025885|IPR025949	Fimbrial biogenesis outer membrane usher protein|Fimbrial membrane usher, conserved site|PapC N-terminal domain|PapC-like C-terminal domain	GO:0005215|GO:0005515|GO:0006810|GO:0016020	PF00577|PF13953|PF13954|PS01151|PTHR30451|PTHR30451:SF0|SSF141729
ybgS|ybgS|AP_001384.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR020363	Uncharacterised protein family YbgS		PD079292|PF13985
ybgT|ybgT|AP_001372.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR011724|IPR012994	Cyd operon protein YbgT|Membrane bound YbgT-like		PF08173|TIGR02106
ybhA|ybhA|AP_001397.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000150|IPR006379|IPR023214	Cof protein|HAD-like domain|HAD-superfamily hydrolase, subfamily IIB	GO:0003824|GO:0008152|GO:0016787	G3DSA:3.40.50.1000|PF00702|PS01228|PS01229|PTHR10000|PTHR10000:SF0|SSF56784|TIGR00099|TIGR01484
ybhB|ybhB|AP_001404.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR005247|IPR008914	Phosphatidylethanolamine-binding protein PEBP|YbhB/YbcL		G3DSA:3.90.280.10|PF01161|PTHR30289|PTHR30289:SF0|SSF49777|TIGR00481
ybhC|ybhC|AP_001403.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000070|IPR011050|IPR012334|IPR018040	Pectin lyase fold|Pectin lyase fold/virulence factor|Pectinesterase, active site|Pectinesterase, catalytic	GO:0005618|GO:0030599|GO:0042545	G3DSA:2.160.20.10|PF01095|PS00503|SSF51126
ybhD|ybhD|AP_001399.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000847|IPR005119|IPR011991	LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain	GO:0003700|GO:0006355	G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PR00039|PS50931|PTHR30419|PTHR30419:SF0|SSF46785|SSF53850
ybhE|ybhE|AP_001398.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR011045|IPR015943|IPR019405|IPR022528	6-phosphogluconolactonase, YbhE-type|Lactonase, 7-bladed beta propeller|Nitrous oxide reductase, N-terminal|WD40/YVTN repeat-like-containing domain	GO:0005515|GO:0005975|GO:0006098|GO:0017057	G3DSA:2.130.10.10|MF_01605|PF10282|PTHR30344|PTHR30344:SF0|SSF50974
ybhF|ybhF|AP_001425.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003439|IPR003593|IPR017871|IPR027417	AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase	GO:0000166|GO:0005524|GO:0016887|GO:0017111	G3DSA:3.40.50.300|PF00005|PS00211|PS50893|PTHR24220|PTHR24220:SF136|SM00382|SSF52540
ybhG|ybhG|AP_001426.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR006143|IPR022936	RND efflux pump, membrane fusion protein|Uncharacterised protein family UPF0194, membrane protein YbhG	GO:0016020|GO:0055085	G3DSA:2.40.50.100|MF_01304|PF00529|PTHR32347|SSF111369|SSF56954
ybhH|ybhH|AP_001400.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR007400	PrpF protein		G3DSA:3.10.310.10|PF04303|PTHR30349|PTHR30349:SF2|SSF54506
ybhI|ybhI|AP_001401.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001898	Sodium/sulphate symporter	GO:0005215|GO:0006814|GO:0016020|GO:0055085	PF00939|PTHR10283|PTHR10283:SF13|TIGR00785
ybhJ|ybhJ|AP_001402.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000573|IPR001030|IPR015928|IPR015931|IPR015932|IPR015935|IPR015937	Aconitase A/isopropylmalate dehydratase small subunit, swivel|Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha|Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3|Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2|Aconitase/3-isopropylmalate dehydratase, swivel|Aconitase/isopropylmalate dehydratase|Acontiase A paralogue, bacterial	GO:0008152	G3DSA:3.20.19.10|G3DSA:3.30.499.10|G3DSA:3.40.1060.10|PF00330|PF00694|PR00415|PTHR11670|PTHR11670:SF4|SSF52016|SSF53732
ybhK|ybhK|AP_001411.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002882|IPR010119	LPPG:FO 2-phospho-L-lactate transferase CofD/UPF0052|Uncharacterised protein family UPF0052		G3DSA:3.40.50.10680|PF01933|PTHR30135|PTHR30135:SF0|SSF142338|TIGR01826
ybhL|ybhL|AP_001417.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR006214	Bax inhibitor 1-related		PF01027|PTHR23291|PTHR23291:SF6
ybhM|ybhM|AP_001418.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR006214	Bax inhibitor 1-related		PF01027
ybhN|ybhN|AP_001419.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR022791	Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD		PF03706
ybhO|ybhO|AP_001420.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001736|IPR025202	Phospholipase D-like domain|Phospholipase D/Transphosphatidylase	GO:0003824|GO:0008152	G3DSA:3.30.870.10|PF13091|PS50035|PTHR21248|PTHR21248:SF0|SM00155|SSF56024
ybhP|ybhP|AP_001421.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR005135	Endonuclease/exonuclease/phosphatase		G3DSA:3.60.10.10|PF03372|SSF56219
ybhQ|ybhQ|AP_001422.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR021303	Uncharacterised protein family, inner membrane, YbhQ		PF11076
ybhR|ybhR|AP_001423.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000412|IPR013526	ABC-2|ABC-2 transporter	GO:0005215|GO:0005524|GO:0006810|GO:0016020|GO:0042626	PF12698|PR00164|PS51012|PTHR30294
ybhS|ybhS|AP_001424.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000412	ABC-2	GO:0005524|GO:0006810|GO:0016020|GO:0042626	PF12698|PS51012|PTHR30294
ybhT|ybhT|AP_001393.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR019702	Protein of unknown function DUF2592		PF10766
ybiA|ybiA|AP_001429.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR012816	Conserved hypothetical protein CHP02464		PF08719|SSF143990|TIGR02464
ybiB|ybiB|AP_001431.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000312|IPR017459	Glycosyl transferase family 3, N-terminal domain|Glycosyl transferase, family 3	GO:0008152|GO:0016757	G3DSA:1.20.970.10|G3DSA:3.40.1030.10|PF02885|SSF47648|SSF52418
ybiC|ybiC|AP_001432.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003767	Malate/L-lactate dehydrogenase	GO:0008152|GO:0016491|GO:0055114	G3DSA:1.10.1530.10|G3DSA:1.20.5.460|G3DSA:3.30.1370.60|PF02615|PTHR11091|PTHR11091:SF0|SSF89733
ybiH|ybiH|AP_001427.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001647|IPR009057|IPR011075|IPR015292|IPR015893|IPR023772	DNA-binding HTH domain, TetR-type|DNA-binding HTH domain, TetR-type, conserved site|Homeodomain-like|Tetracycline transcriptional regulator, TetR-like, C-terminal|Tetracycline transcriptional regulator, TetR-related, C-terminal|Transcription regulator YbiH, C-terminal	GO:0003677	G3DSA:1.10.10.60|G3DSA:1.10.357.10|PF00440|PF09209|PR00455|PS01081|PS50977|SSF46689|SSF48498
ybiI|ybiI|AP_001434.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000962|IPR020458|IPR020460	Zinc finger, DksA/TraR C4-type|Zinc finger, DksA/TraR C4-type conserved site|Zinc finger, DksA/TraR C4-type, bacteria	GO:0008270	PF01258|PR00618|PS01102|PS51128|SSF57716
ybiJ|ybiJ|AP_001433.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR010854|IPR025543	Dodecin-like|Domain of unknown function DUF1471		G3DSA:3.30.1660.10|PF07338|SSF159871
ybiM|ybiM|AP_001437.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR010854|IPR025543	Dodecin-like|Domain of unknown function DUF1471		G3DSA:3.30.1660.10|PF07338|SSF159871
ybiN|ybiN|AP_001438.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR010286|IPR016909	Ribosomal RNA large subunit methyltransferase F|Ribosomal RNA large subunit methyltransferase F-like	GO:0005737|GO:0006364|GO:0008168|GO:0008988	G3DSA:3.40.50.150|MF_01848|PF05971|PIRSF029038|PTHR13393|PTHR13393:SF0|SSF53335
ybiO|ybiO|AP_001439.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR006685|IPR010920|IPR011014|IPR011066	Like-Sm (LSM) domain|Mechanosensitive ion channel MscS|Mechanosensitive ion channel MscS, C-terminal|Mechanosensitive ion channel MscS, transmembrane-2	GO:0016020|GO:0055085	G3DSA:2.30.30.60|PF00924|PTHR30460|SSF50182|SSF82689|SSF82861
ybiP|ybiP|AP_001446.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000917|IPR017849|IPR017850	Alkaline phosphatase-like, alpha/beta/alpha|Alkaline-phosphatase-like, core domain|Sulfatase	GO:0003824|GO:0008152|GO:0008484	G3DSA:3.40.720.10|PF00884|PTHR30443|PTHR30443:SF0|SSF53649
ybiR|ybiR|AP_001449.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004680	Citrate transporter-like domain	GO:0016021|GO:0055085	PF03600|PTHR10283|PTHR10283:SF60
ybiS|ybiS|AP_001450.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR005490	L,D-transpeptidase catalytic domain	GO:0016740	G3DSA:2.40.440.10|PF03734|PTHR30582|PTHR30582:SF0|SSF141523
ybiT|ybiT|AP_001451.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003439|IPR003593|IPR027417	AAA+ ATPase domain|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase	GO:0000166|GO:0005524|GO:0016887|GO:0017111	G3DSA:3.40.50.300|PF00005|PF12848|PS50893|PTHR19211|PTHR19211:SF11|SM00382|SSF52540
ybiU|ybiU|AP_001452.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR010856|IPR027443	Isopenicillin N synthase-like|Protein of unknown function DUF1479		G3DSA:2.60.120.330|PF07350|PTHR30613|SSF51197
ybiV|ybiV|AP_001453.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000150|IPR006379|IPR023214	Cof protein|HAD-like domain|HAD-superfamily hydrolase, subfamily IIB	GO:0003824|GO:0008152|GO:0016787	G3DSA:3.30.1240.10|G3DSA:3.40.50.1000|PF08282|PS01229|PTHR10000|PTHR10000:SF0|SSF56784|TIGR00099|TIGR01484
ybiW|ybiW|AP_001454.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001150|IPR004184|IPR010098|IPR019777	Formate C-acetyltransferase glycine radical, conserved site|Glycine radical domain|Glycyl radical enzyme, PFL2/glycerol dehydratase family|Pyruvate formate lyase domain	GO:0003824|GO:0008152	G3DSA:3.20.70.20|PF01228|PF02901|PS00850|PS51149|PS51554|PTHR30191|PTHR30191:SF0|SSF51998|TIGR01774
ybiX|ybiX|AP_001435.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR005123|IPR006620|IPR023550	Oxoglutarate/iron-dependent dioxygenase|PKHD-type hydroxylase|Prolyl 4-hydroxylase, alpha subunit	GO:0005506|GO:0016491|GO:0016705|GO:0016706|GO:0031418|GO:0055114	MF_00657|PF13640|PS51471|PTHR30496|PTHR30496:SF0|SM00702|SSF51197
ybiY|ybiY|AP_001455.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001989|IPR007197|IPR012839	Glycyl radical enzyme activase|Radical SAM|Radical-activating enzyme, conserved site	GO:0003824|GO:0005737|GO:0006006|GO:0016491|GO:0051536|GO:0051539|GO:0055114	G3DSA:3.80.30.10|PF04055|PF13353|PIRSF000371|PS01087|PTHR30352|SSF102114|TIGR02494
ybjC|ybjC|AP_001481.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR010815	Protein of unknown function DUF1418		PF07214
ybjD|ybjD|AP_001507.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR022602|IPR027417	P-loop containing nucleoside triphosphate hydrolase|Protein of unknown function DUF2813		G3DSA:3.40.50.300|PF11398|SSF52540
ybjE|ybjE|AP_001505.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR005642	Protein of unknown function DUF340, prokaryotic membrane		PD022789|PF03956
ybjG|ybjG|AP_001472.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000326|IPR016118	Phosphatidic acid phosphatase type 2/haloperoxidase|Phosphatidic acid phosphatase/chloroperoxidase, N-terminal	GO:0003824|GO:0016020	G3DSA:1.20.144.10|PF01569|PTHR14969|SM00014|SSF48317
ybjH|ybjH|AP_001474.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091				
ybjI|ybjI|AP_001475.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000150|IPR006379|IPR023214	Cof protein|HAD-like domain|HAD-superfamily hydrolase, subfamily IIB	GO:0003824|GO:0008152|GO:0016787	G3DSA:3.30.1240.10|G3DSA:3.40.50.1000|PF00702|PS01229|PTHR10000|PTHR10000:SF0|SSF56784|TIGR00099|TIGR01484
ybjJ|ybjJ|AP_001476.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR011701|IPR016196|IPR020846	Major facilitator superfamily|Major facilitator superfamily domain|Major facilitator superfamily domain, general substrate transporter	GO:0016021|GO:0055085	G3DSA:1.20.1250.20|PF07690|PS50850|PTHR24003|PTHR24003:SF13|SSF103473
ybjK|ybjK|AP_001477.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001647|IPR009057|IPR011075|IPR015893	DNA-binding HTH domain, TetR-type|Homeodomain-like|Tetracycline transcriptional regulator, TetR-like, C-terminal|Tetracycline transcriptional regulator, TetR-related, C-terminal	GO:0003677	G3DSA:1.10.357.10|PF00440|PF13977|PS50977|SSF46689|SSF48498
ybjL|ybjL|AP_001478.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR006037|IPR006512|IPR023017	Regulator of K+ conductance, C-terminal|Transport protein YbjL, putative|YidE/YbjL duplication	GO:0006813|GO:0008324	G3DSA:3.30.70.1450|MF_01015|PF02080|PF06826|PS51202|PTHR30445|PTHR30445:SF0|SSF116726|TIGR01625
ybjM|ybjM|AP_001479.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR020368	Uncharacterised protein family YbjM	GO:0016021	PD079046|PF11045
ybjN|ybjN|AP_001484.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR019660	Putative sensory transduction regulator YbjN		PF10722
ybjO|ybjO|AP_001489.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR019703	Protein of unknown function DUF2593		PF10767
ybjP|ybjP|AP_001496.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091				PS51257
ybjQ|ybjQ|AP_001497.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002765	Uncharacterised protein family UPF0145		G3DSA:3.30.110.70|MF_00338|PF01906|SSF117782
ybjR|ybjR|AP_001498.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002477|IPR002502	N-acetylmuramoyl-L-alanine amidase domain|Peptidoglycan binding-like	GO:0008745|GO:0009253	G3DSA:3.40.80.10|PF01510|PS51257|PTHR30417|PTHR30417:SF0|SM00644|SSF47090|SSF55846
ybjS|ybjS|AP_001499.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001509|IPR016040	NAD(P)-binding domain|NAD-dependent epimerase/dehydratase	GO:0003824|GO:0044237|GO:0050662	G3DSA:3.40.50.720|G3DSA:3.90.25.10|PF01370|PTHR10366|PTHR10366:SF145|SSF51735
ybjT|ybjT|AP_001500.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR016040|IPR021295	NAD(P)-binding domain|Protein of unknown function DUF2867		G3DSA:3.40.50.720|PF11066|PF13460|PTHR10366|PTHR10366:SF144|SSF51735
ybjX|ybjX|AP_001508.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR007488	Protein of unknown function DUF535		PF04393
ycaC|ycaC|AP_001527.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000868	Isochorismatase-like	GO:0003824|GO:0008152	G3DSA:3.40.50.850|PF00857|PTHR14119|SSF52499
ycaD|ycaD|AP_001528.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR011701|IPR016196|IPR020846|IPR023745	MSF-type transporter, YcaD|Major facilitator superfamily|Major facilitator superfamily domain|Major facilitator superfamily domain, general substrate transporter	GO:0016021|GO:0055085	G3DSA:1.20.1250.20|MF_01149|PF07690|PS50850|PTHR24003|SSF103473
ycaI|ycaI|AP_001543.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001279|IPR004477|IPR004797	Beta-lactamase-like|ComEC/Rec2-related protein|Competence protein ComEC/Rec2	GO:0016021|GO:0016787|GO:0030420	G3DSA:3.60.15.10|PF00753|PF03772|PTHR30619|SM00849|SSF56281|TIGR00360|TIGR00361
ycaJ|ycaJ|AP_001522.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003593|IPR003959|IPR008921|IPR021886|IPR027417	AAA+ ATPase domain|ATPase, AAA-type, core|DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal|MgsA AAA+ ATPase C-terminal|P-loop containing nucleoside triphosphate hydrolase	GO:0000166|GO:0003677|GO:0005524|GO:0006260|GO:0017111	G3DSA:1.10.3710.10|G3DSA:1.10.8.60|G3DSA:1.20.272.10|G3DSA:3.40.50.300|PF00004|PF12002|PTHR13779|PTHR13779:SF11|SM00382|SSF48019|SSF52540
ycaK|ycaK|AP_001531.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003680	Flavodoxin-like fold		G3DSA:3.40.50.360|PF02525|PTHR10204|PTHR10204:SF0|SSF52218
ycaL|ycaL|AP_001539.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001915	Peptidase M48	GO:0004222|GO:0006508|GO:0016020	G3DSA:3.30.2010.10|PF01435|PS51257|PTHR22726
ycaM|ycaM|AP_001529.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002293	Amino acid/polyamine transporter I	GO:0003333|GO:0015171|GO:0016020	PF13520|PIRSF006060|PTHR11785|PTHR11785:SF140
ycaN|ycaN|AP_001530.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000847|IPR005119|IPR011991	LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain	GO:0003700|GO:0006355	G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PS50931|PTHR32459|PTHR32459:SF0|SSF46785|SSF53850
ycaO|ycaO|AP_001535.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003776	YcaO-like		PF02624|TIGR00702
ycaP|ycaP|AP_001536.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR007353|IPR023090	Protein of unknown function DUF421|Uncharacterised domain UPF0702, alpha/beta domain		G3DSA:3.30.240.20|PF04239
ycaQ|ycaQ|AP_001546.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR009351	Protein of unknown function DUF1006		PF06224|PTHR30528
ycaR|ycaR|AP_001547.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR005651	Uncharacterised protein family UPF0434/Trm112		G3DSA:2.20.25.10|MF_01187|PF03966|SSF158997
ycbB|ycbB|AP_001555.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002477|IPR005490	L,D-transpeptidase catalytic domain|Peptidoglycan binding-like	GO:0016740	G3DSA:1.10.101.10|G3DSA:2.40.440.10|PF01471|PF03734|PTHR30623|SSF141523|SSF47090
ycbC|ycbC|AP_001550.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003848|IPR014729	Domain of unknown function DUF218|Rossmann-like alpha/beta/alpha sandwich fold		G3DSA:3.40.50.620|PF02698
ycbF|ycbF|AP_001574.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001829|IPR008962|IPR016147|IPR016148	PapD-like|Pili assembly chaperone, C-terminal domain|Pili assembly chaperone, N-terminal, bacterial|Pili assembly chaperone, bacterial	GO:0030288|GO:0043711|GO:0071555	G3DSA:2.60.40.1070|G3DSA:2.60.40.360|PF00345|PF02753|PR00969|PTHR30251|SSF49354|SSF49584
ycbG|ycbG|AP_001586.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR009390	Macrodomain Ter protein, MatP	GO:0043565	MF_01073|PD033720|PF06303
ycbJ|ycbJ|AP_001549.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR011009	Protein kinase-like domain	GO:0016772	G3DSA:3.90.1200.10|SSF56112
ycbK|ycbK|AP_001556.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR006311|IPR009045|IPR010275	Hedgehog signalling/DD-peptidase zinc-binding domain|Protein of unknown function DUF882|Twin-arginine translocation pathway, signal sequence		G3DSA:3.30.1380.10|PF05951|PS51318|SSF55166
ycbL|ycbL|AP_001557.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001279	Beta-lactamase-like	GO:0016787	G3DSA:3.60.15.10|PF00753|PTHR11935|PTHR11935:SF8|SM00849|SSF56281
ycbQ|ycbQ|AP_001568.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000259|IPR008966	Adhesion domain|Fimbrial-type adhesion domain	GO:0007155|GO:0009289	G3DSA:2.60.40.1090|PF00419|SSF49401
ycbR|ycbR|AP_001569.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001829|IPR008962|IPR016147|IPR016148|IPR018046	PapD-like|Pili assembly chaperone, C-terminal domain|Pili assembly chaperone, N-terminal, bacterial|Pili assembly chaperone, bacterial|Pili assembly chaperone, conserved site	GO:0030288|GO:0043711|GO:0071555	G3DSA:2.60.40.1070|G3DSA:2.60.40.360|PF00345|PF02753|PR00969|PS00635|PS51257|PTHR30251|SSF49354|SSF49584
ycbS|ycbS|AP_001570.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000015|IPR018030|IPR025885|IPR025949	Fimbrial biogenesis outer membrane usher protein|Fimbrial membrane usher, conserved site|PapC N-terminal domain|PapC-like C-terminal domain	GO:0005215|GO:0005515|GO:0006810|GO:0016020	PF00577|PF13953|PF13954|PS01151|PTHR30451|PTHR30451:SF0|SSF141729
ycbT|ycbT|AP_001571.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000259|IPR008966	Adhesion domain|Fimbrial-type adhesion domain	GO:0007155|GO:0009289	G3DSA:2.60.40.1090|PF00419|SSF49401
ycbU|ycbU|AP_001572.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000259|IPR008966	Adhesion domain|Fimbrial-type adhesion domain	GO:0007155|GO:0009289	G3DSA:2.60.40.1090|PF00419|SSF49401
ycbV|ycbV|AP_001573.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000259|IPR008966	Adhesion domain|Fimbrial-type adhesion domain	GO:0007155|GO:0009289	G3DSA:2.60.40.1090|PF00419|SSF49401
ycbW|ycbW|AP_001576.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR009809	Cell division protein ZapC		MF_00906|PF07126|PIRSF010252
ycbX|ycbX|AP_001577.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001041|IPR005302|IPR005303|IPR006058|IPR011037|IPR012675	2Fe-2S ferredoxin, iron-sulphur binding site|2Fe-2S ferredoxin-type domain|Beta-grasp domain|MOSC, N-terminal beta barrel|Molybdenum cofactor sulfurase, C-terminal|Pyruvate kinase-like, insert domain	GO:0003824|GO:0009055|GO:0030151|GO:0030170|GO:0051536|GO:0051537	G3DSA:3.10.20.30|PF00111|PF03473|PF03476|PS00197|PS51085|PS51340|PTHR14237|SSF141673|SSF50800|SSF54292
ycbY|ycbY|AP_001578.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000241|IPR002052|IPR002296|IPR004114|IPR017244|IPR019614	DNA methylase, N-6 adenine-specific, conserved site|N6 adenine-specific DNA methyltransferase, N12 class|Putative RNA methylase domain|Ribosomal RNA large subunit methyltransferase K/L|S-adenosylmethionine-dependent methyltransferase|THUMP	GO:0003676|GO:0003723|GO:0005737|GO:0008168|GO:0008990|GO:0031167|GO:0032259	G3DSA:3.40.50.150|MF_01858|PF01170|PF02926|PF10672|PIRSF037618|PR00507|PS00092|PS01261|PS51165|PTHR18895|PTHR18895:SF28|SM00981|SSF53335
ycbZ|ycbZ|AP_001585.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR008269|IPR014721|IPR020568|IPR027065	Lon protease|Peptidase S16, Lon C-terminal|Ribosomal protein S5 domain 2-type fold|Ribosomal protein S5 domain 2-type fold, subgroup	GO:0004176|GO:0004252|GO:0005524|GO:0006508|GO:0030163	G3DSA:3.30.230.10|PF05362|PF13654|PR00830|PTHR10046|SSF54211
yccA|yccA|AP_001600.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR006213|IPR006214	Bax inhibitor 1, conserved site|Bax inhibitor 1-related	GO:0016021|GO:0043066	PF01027|PS01243|PTHR23291|PTHR23291:SF25
yccC|yccC|AP_001610.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003856|IPR005702|IPR025669|IPR027417	AAA domain|Exopolysaccharide synthesis protein|Lipopolysaccharide biosynthesis|P-loop containing nucleoside triphosphate hydrolase	GO:0009103|GO:0016020|GO:0030234|GO:0045227	G3DSA:3.40.50.300|PF02706|PF13614|PF13807|PTHR32309|PTHR32309:SF0|SSF52540|TIGR01007
yccF|yccF|AP_001591.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR005185	Protein of unknown function DUF307		PF03733|PIRSF028777
yccJ|yccJ|AP_001634.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR025600	YccJ-like protein		PF13993
yccK|yccK|AP_001599.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR007453|IPR025526	DsrC-like domain|Sulphur transfer protein DsrC/TusE		G3DSA:1.10.10.370|G3DSA:3.30.1420.10|PF04358|PIRSF006223|SSF69721|TIGR03342
yccM|yccM|AP_001623.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001450|IPR017896|IPR017900	4Fe-4S binding domain|4Fe-4S ferredoxin, iron-sulphur binding, conserved site|4Fe-4S ferredoxin-type, iron-sulpur binding domain	GO:0009055|GO:0051536	G3DSA:3.30.70.20|PF12801|PS00198|PS51379|PTHR30224|SSF54862
yccR|yccR|AP_001589.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR007076|IPR007077|IPR026256	TfoX, C-terminal|TfoX, N-terminal|Transcriptional regulator, TfoX/Sxy-type		G3DSA:1.10.150.20|G3DSA:3.30.1460.30|PF04993|PF04994|PIRSF028788|SSF159894
yccS|yccS|AP_001590.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR010019|IPR010020	Integral membrane protein, YccS|Integral membrane protein, YccS/YhfK		PF12805|PF13515|TIGR01666|TIGR01667
yccT|yccT|AP_001594.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR018635	Uncharacterised protein family UPF0319		PF09829
yccU|yccU|AP_001595.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003781|IPR016040	CoA-binding|NAD(P)-binding domain	GO:0048037	G3DSA:3.40.50.720|PF13380|SM00881|SSF51735
yccV|yccV|AP_001596.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR011722|IPR022866	Heat shock protein HspQ|Hemimethylated DNA-binding domain	GO:0003677	MF_01194|PF08755|SM00992|SSF141255|TIGR02097
yccW|yccW|AP_001597.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR015947|IPR019614	PUA-like domain|S-adenosylmethionine-dependent methyltransferase	GO:0008168	G3DSA:2.30.130.10|G3DSA:3.30.750.80|G3DSA:3.40.50.150|PF10672|PTHR11061|PTHR11061:SF12|SSF53335|SSF88697
yccX|yccX|AP_001598.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001792|IPR017968|IPR020456	Acylphosphatase|Acylphosphatase, conserved site|Acylphosphatase-like	GO:0003998	G3DSA:3.30.70.100|MF_01450|PF00708|PR00112|PS00150|PS00151|PS51160|PTHR10029|SSF54975
yccZ|yccZ|AP_001612.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003715|IPR019554	Polysaccharide export protein|Soluble ligand binding domain	GO:0015159|GO:0015774|GO:0016020	G3DSA:1.20.5.70|G3DSA:3.10.560.10|G3DSA:3.30.1950.10|PF02563|PF10531|PS51257
ycdB|ycdB|AP_001648.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR006311|IPR006313|IPR006314|IPR011008	Dimeric alpha-beta barrel|Dyp-type peroxidase|Tat-translocated enzyme|Twin-arginine translocation pathway, signal sequence	GO:0004601|GO:0005506|GO:0016684|GO:0020037|GO:0055114	PF04261|PS51318|PS51404|PTHR30637|PTHR30637:SF0|SSF54909|TIGR01412|TIGR01413
ycdC|ycdC|AP_001644.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001647|IPR009057|IPR011075|IPR013573|IPR015893|IPR019915	DNA-binding HTH domain, TetR-type|Homeodomain-like|Tetracycline transcriptional regulator, TetR-like, C-terminal|Tetracycline transcriptional regulator, TetR-related, C-terminal|Transcription regulator YcdC, C-terminal|Transcription regulator, pyrimidine utilisation, RutR	GO:0003677|GO:0045892	G3DSA:1.10.10.60|G3DSA:1.10.357.10|PF00440|PF08362|PR00455|PS50977|PTHR30055|PTHR30055:SF0|SSF46689|SSF48498|TIGR03613
ycdG|ycdG|AP_001637.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR006042|IPR006043|IPR019918	Pyrimidine permease RutG, predicted|Xanthine/uracil permease|Xanthine/uracil/vitamin C permease	GO:0005215|GO:0006810|GO:0006864|GO:0015218|GO:0016020|GO:0055085	PF00860|PS01116|PTHR11119|PTHR11119:SF10|TIGR00801|TIGR03616
ycdH|ycdH|AP_001638.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002563|IPR012349|IPR019917	FMN reductase (NADH) RutF|FMN-binding split barrel|Flavin reductase-like, FMN-binding	GO:0008752|GO:0010181|GO:0016491|GO:0042602|GO:0055114	G3DSA:2.30.110.10|MF_00833|PF01613|PTHR30466|PTHR30466:SF0|SM00903|SSF50475|TIGR03615
ycdI|ycdI|AP_001639.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000415|IPR023936	NADH dehydrogenase/NAD(P)H nitroreductase, putative, RutE|Nitroreductase-like	GO:0016491|GO:0055114	G3DSA:3.40.109.10|MF_01204|PF00881|PTHR23026|PTHR23026:SF43|SSF55469
ycdK|ycdK|AP_001641.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR006175|IPR013813|IPR019897|IPR019898	Endoribonuclease L-PSP/chorismate mutase-like|Putative aminoacrylate peracid reductase RutC|YjgF-like protein, conserved site|YjgF/Yer057p/UK114 family		G3DSA:3.30.1330.40|MF_00831|PF01042|PS01094|PTHR11803|SSF55298|TIGR03610
ycdL|ycdL|AP_001642.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000868|IPR019916	Isochorismatase, RutB|Isochorismatase-like	GO:0003824|GO:0008152|GO:0016811	G3DSA:3.40.50.850|MF_00830|PF00857|PTHR11080|PTHR11080:SF3|SSF52499|TIGR03614
ycdM|ycdM|AP_001643.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR011251|IPR019914	Luciferase-like domain|Pyrimidine monooxygenase RutA	GO:0004497|GO:0006212|GO:0016705|GO:0055114	G3DSA:3.20.20.30|MF_01699|PF00296|PTHR30011|PTHR30011:SF0|SSF51679|TIGR03612
ycdO|ycdO|AP_001647.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR008972|IPR018976	Cupredoxin|Peptidase M75, Imelysin		G3DSA:2.60.40.420|PF09375|PF13473|PTHR30030|PTHR30030:SF0|SSF49503
ycdP|ycdP|AP_001650.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR023829	Poly-beta-1,6-N-acetyl-D-glucosamine biosynthesis protein PgaD	GO:0042710	PD460230|PF13994|TIGR03940
ycdQ|ycdQ|AP_001651.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001173|IPR023853	Glycosyl transferase, family 2|Poly-beta-1,6 N-acetyl-D-glucosamine synthase PgaC/IcaA	GO:0008375|GO:0042710	G3DSA:3.90.550.10|PF00535|PTHR22916|PTHR22916:SF0|SSF53448|TIGR03937
ycdR|ycdR|AP_001652.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002509|IPR011330|IPR023854	Glycoside hydrolase/deacetylase, beta/alpha-barrel|Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB|Polysaccharide deacetylase	GO:0003824|GO:0005975|GO:0016810|GO:0042710	G3DSA:3.20.20.370|PF01522|PS51257|SSF88713|TIGR03938
ycdS|ycdS|AP_001653.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR011990|IPR019734|IPR023870	Poly-beta-1,6 N-acetyl-D-glucosamine export porin PgaA|Tetratricopeptide repeat|Tetratricopeptide-like helical	GO:0005515|GO:0022891|GO:0042710	G3DSA:1.25.40.10|SM00028|SSF48452|TIGR03939
ycdT|ycdT|AP_001654.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000160|IPR001054	Adenylyl cyclase class-3/4/guanylyl cyclase|GGDEF domain	GO:0009190|GO:0016849|GO:0035556	G3DSA:3.30.70.270|PF00990|PS50887|PTHR10919|PTHR10919:SF355|SM00267|SSF55073|TIGR00254
ycdU|ycdU|AP_001657.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091				
ycdW|ycdW|AP_001658.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR006140|IPR016040|IPR023514	D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding|Glyoxylate/hydroxypyruvate reductase A|NAD(P)-binding domain	GO:0016616|GO:0016618|GO:0030267|GO:0048037|GO:0055114	G3DSA:3.40.50.720|MF_01666|PF02826|PS00671|PTHR10996|PTHR10996:SF3|SSF51735
ycdX|ycdX|AP_001659.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003141|IPR004013|IPR016195|IPR023710	PHP, C-terminal|Polymerase/histidinol phosphatase, N-terminal|Polymerase/histidinol phosphatase-like|Probable phosphatase YcdX	GO:0003677|GO:0003824|GO:0003887|GO:0006260|GO:0008270	G3DSA:3.20.20.140|MF_01561|PF02811|SM00481|SSF89550
ycdY|ycdY|AP_001660.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR020945|IPR026269	DMSO/Nitrate reductase chaperone|Tat proofreading chaperone DmsD-type		G3DSA:1.10.3480.10|PF02613|PIRSF004690|SSF89155
ycdZ|ycdZ|AP_001661.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR009476	Protein of unknown function DUF1097		PF06496
yceA|yceA|AP_001681.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001763|IPR020936	Rhodanese-like domain|Uncharacterised protein family UPF0176		G3DSA:3.40.250.10|MF_00469|PF00581|PS50206|PTHR18838|PTHR18838:SF15|SM00450|SSF52821
yceB|yceB|AP_001689.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR010835	Protein of unknown function DUF1439		PF07273|PS51257
yceD|yceD|AP_001714.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003772	Protein of unknown function DUF177		PF02620
yceF|yceF|AP_001713.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003697	Maf-like protein	GO:0005737	G3DSA:3.90.950.10|MF_00528|PF02545|PIRSF006305|PTHR11746|PTHR11746:SF33|SSF52972|TIGR00172
yceG|yceG|AP_001723.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003770|IPR013087	Uncharacterised protein family UPF0755, YceG-like|Zinc finger C2H2-type/integrase DNA-binding domain	GO:0003676	G3DSA:3.30.160.60|PF02618|PTHR30518|TIGR00247
yceH|yceH|AP_001693.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR007432|IPR011991	Protein of unknown function DUF480|Winged helix-turn-helix DNA-binding domain		G3DSA:1.10.10.10|MF_01584|PF04337|PTHR30210|PTHR30210:SF0|SSF46785
yceI|yceI|AP_001682.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR007372|IPR023480	Lipid/polyisoprenoid-binding, YceI-like|Uncharacterised protein family UPF0312/YceI		G3DSA:2.40.128.110|MF_00780|PF04264|SM00867|SSF101874
yceJ|yceJ|AP_001683.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR016174	Di-haem cytochrome, transmembrane	GO:0016020|GO:0022904	G3DSA:1.20.950.20|PF00033|PTHR30529|PTHR30529:SF0|SSF81342
yceK|yceK|AP_001677.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR010780	Protein of unknown function DUF1375		PF07119|PS51257
yceO|yceO|AP_001684.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR024494	Protein of unknown function DUF2770		PD049682|PF10968
yceP|yceP|AP_001686.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR025730	Biofilm regulator BssS		PD060858|PF13991
yceQ|yceQ|AP_001711.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR020371	Uncharacterised protein family YceQ		PD078424|PF10848
ycfD|ycfD|AP_001754.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003347|IPR013109	JmjC domain|Lysine-specific demethylase NO66/MYC-induced nuclear antigen	GO:0005515	G3DSA:2.60.120.650|PF08007|PTHR13096|PTHR13096:SF0|SM00558|SSF51197
ycfH|ycfH|AP_001726.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001130|IPR015991|IPR018228	Deoxyribonuclease, TatD-related, conserved site|TatD family|Uncharacterised deoxyribonuclease TatD-type	GO:0016888	G3DSA:3.20.20.140|PF01026|PIRSF005902|PS01091|PS01137|PTHR10060|PTHR10060:SF10|SSF51556|TIGR00010
ycfJ|ycfJ|AP_001736.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR008816	Glycine zipper 2TM domain	GO:0019867	PF05433
ycfL|ycfL|AP_001730.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR010824	Protein of unknown function DUF1425		PF07233|PS51257
ycfM|ycfM|AP_001731.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR014094	Penicillin-binding protein activator LpoB		MF_01889|PF13036|PS51257|TIGR02722
ycfN|ycfN|AP_001732.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002575|IPR011009|IPR014093	Aminoglycoside phosphotransferase|Protein kinase-like domain|Thiamine kinase	GO:0006772|GO:0016310|GO:0016772|GO:0019165	G3DSA:3.90.1200.10|MF_01604|PF01636|SSF56112|TIGR02721
ycfP|ycfP|AP_001734.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR008886|IPR022987	Uncharacterised protein family UPF0227|Uncharacterised protein family UPF0227/Esterase YqiA		G3DSA:3.40.50.1820|MF_01047|PF05728|SSF53474
ycfQ|ycfQ|AP_001737.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001647|IPR009057|IPR011075|IPR015893	DNA-binding HTH domain, TetR-type|Homeodomain-like|Tetracycline transcriptional regulator, TetR-like, C-terminal|Tetracycline transcriptional regulator, TetR-related, C-terminal	GO:0003677	G3DSA:1.10.10.60|G3DSA:1.10.357.10|PF00440|PR00455|PS50977|SSF46689|SSF48498
ycfR|ycfR|AP_001738.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR010854|IPR025543	Dodecin-like|Domain of unknown function DUF1471		G3DSA:3.30.1660.10|PF07338|SSF159871
ycfS|ycfS|AP_001739.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002482|IPR005490|IPR018392	L,D-transpeptidase catalytic domain|Peptidoglycan-binding Lysin subgroup|Peptidoglycan-binding lysin domain	GO:0016740|GO:0016998	G3DSA:2.40.440.10|G3DSA:3.10.350.10|PF01476|PF03734|PTHR30582|PTHR30582:SF0|SM00257|SSF141523
ycfT|ycfT|AP_001741.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002656	Acyltransferase 3	GO:0016747	PF01757
ycfX|ycfX|AP_001745.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000600|IPR023505	N-acetyl-D-glucosamine kinase|ROK	GO:0045127	G3DSA:3.30.420.40|MF_01271|PF00480|PS01125|PTHR18964|PTHR18964:SF99|SSF53067
ycfZ|ycfZ|AP_001747.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091				
ycgB|ycgB|AP_001813.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR007390	Sporulation stage V, protein R		PF04293|PTHR30029
ycgE|ycgE|AP_001787.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000551|IPR009061	DNA binding domain, putative|Transcription regulator HTH, MerR	GO:0000166|GO:0003700|GO:0006355	G3DSA:1.10.1660.10|PF13411|PS00552|PS50937|SM00422|SSF46955
ycgF|ycgF|AP_001788.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001633|IPR001792|IPR007024	Acylphosphatase-like|BLUF domain|Diguanylate phosphodiesterase, EAL domain	GO:0009882|GO:0071949	G3DSA:3.20.20.450|PF00563|PF04940|PS50883|PS50925|PTHR30394|PTHR30394:SF0|SM00052|SM01034|SSF141868|SSF54975
ycgG|ycgG|AP_001793.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001633|IPR024744	Diguanylate phosphodiesterase, EAL domain|Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain		G3DSA:3.20.20.450|PF00563|PF12792|PS50883|PTHR30394|PTHR30394:SF0|SM00052|SSF141868
ycgI|ycgI|AP_001798.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR005546|IPR006315	Autotransporter beta-domain|Outer membrane autotransporter barrel	GO:0019867	G3DSA:2.40.128.130|PTHR12338|SSF103515|TIGR01414
ycgJ|ycgJ|AP_001802.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR008617	Uncharacterised protein family, YcgJ		PF05666
ycgK|ycgK|AP_001803.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR007280	Peptidase, C-terminal, archaeal/bacterial		G3DSA:2.60.120.380|PF04151
ycgL|ycgL|AP_001804.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR027354	YcgL domain		MF_01866|PD030374|PF05166|PS51648|SSF160191
ycgM|ycgM|AP_001805.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002529|IPR011234	Fumarylacetoacetase, C-terminal|Fumarylacetoacetase, C-terminal-related	GO:0003824|GO:0008152	G3DSA:3.90.850.10|PF01557|PTHR11820|PTHR11820:SF59|SSF56529
ycgN|ycgN|AP_001806.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR005358|IPR008228	Uncharacterised conserved protein UCP006173|Uncharacterised protein family UPF0153		MF_00676|PF03692|PIRSF006173|PTHR30564|PTHR30564:SF0
ycgR|ycgR|AP_001819.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR009875|IPR009926|IPR012349|IPR023787	FMN-binding split barrel|PilZ domain|Type III secretion system flagellar brake protein YcgR|Type III secretion system flagellar brake protein YcgR, N-terminal	GO:0010181|GO:0016491|GO:0035438|GO:0055114|GO:0071945	G3DSA:2.30.110.10|G3DSA:2.40.10.220|MF_01457|PF07238|PF07317
ycgV|ycgV|AP_001827.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003991|IPR004899|IPR005546|IPR006315|IPR011050|IPR012332	Autotransporter beta-domain|Outer membrane autotransporter barrel|P22 tailspike C-terminal domain-like|Pectin lyase fold/virulence factor|Pertactin virulence factor family|Pertactin, central region	GO:0007155|GO:0019867	G3DSA:2.160.20.20|G3DSA:2.40.128.130|PF03212|PF03797|PR01484|PS51208|PTHR12338|PTHR12338:SF3|SM00869|SSF103515|SSF51126|TIGR01414
ycgX|ycgX|AP_001786.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR009833	Bacteriophage DE3, Orf10033		G3DSA:3.30.1810.10|PD021249|PF07166|SSF160419
ycgZ|ycgZ|AP_001789.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR024753	Regulatory protein AriR	GO:0042710|GO:0071229	PF10798
ychA|ychA|AP_001839.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR011990	Tetratricopeptide-like helical	GO:0005515	G3DSA:1.25.40.10|PF13369|PF13371
ychE|ychE|AP_001866.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002771	Multiple antibiotic resistance (MarC)-related	GO:0016021	PF01914|TIGR00427
ychF|ychF|AP_001828.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004396|IPR006073|IPR012675|IPR012676|IPR013029|IPR023192|IPR027417	Beta-grasp domain|Conserved hypothetical protein CHP00092|Domain of unknown function DUF933|GTP binding domain|P-loop containing nucleoside triphosphate hydrolase|TGS-like|TGS-like domain	GO:0005525	G3DSA:1.10.150.300|G3DSA:3.10.20.30|G3DSA:3.40.50.300|PF01926|PF06071|PIRSF006641|PR00326|PTHR23305|PTHR23305:SF4|SSF52540|SSF81271|TIGR00092
ychH|ychH|AP_001830.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR019698	Protein of unknown function DUF2583		PF10762
ychJ|ychJ|AP_001859.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004027|IPR023006	SEC-C motif|Uncharacterised protein family UPF0225		G3DSA:3.10.450.50|MF_00612|PF02810|SSF103642|SSF54427
ychM|ychM|AP_001831.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001902|IPR002645|IPR011547|IPR018045	STAS domain|Sulphate anion transporter|Sulphate anion transporter, conserved site|Sulphate transporter	GO:0008271|GO:0008272|GO:0015116|GO:0016020|GO:0016021|GO:0055085	G3DSA:3.30.750.24|PF00916|PF01740|PF13792|PS01130|PS50801|PTHR11814|PTHR11814:SF6|SSF52091|TIGR00815
ychN|ychN|AP_001847.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003787|IPR027396	DsrEFH-like|Sulphur relay, DsrE/F-like protein		G3DSA:3.40.1260.10|PF02635|SSF75169
ychP|ychP|AP_001848.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR024519	Domain of unknown function DUF3442, intimin/invasin		PF11924
ychQ|ychQ|AP_001838.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR007360	Invasion gene expression up-regulator, SirB		PF04247|PIRSF005610
yciA|yciA|AP_001879.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR006683	Thioesterase superfamily		G3DSA:3.10.129.10|PF03061|PTHR11049|PTHR11049:SF0|SSF54637
yciB|yciB|AP_001880.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR006008	Intracellular septation protein A	GO:0016021	MF_00189|PF04279|TIGR00997
yciC|yciC|AP_001881.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR009627	Uncharacterised protein family UPF0259		MF_01067|PF06790
yciE|yciE|AP_001883.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR009078|IPR010287|IPR012347	Domain of unknown function DUF892|Ferritin-like superfamily|Ferritin-related	GO:0016491|GO:0046914|GO:0055114	G3DSA:1.20.1260.10|PF05974|SSF47240
yciF|yciF|AP_001884.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR009078|IPR010287|IPR012347	Domain of unknown function DUF892|Ferritin-like superfamily|Ferritin-related	GO:0016491|GO:0046914|GO:0055114	G3DSA:1.20.1260.10|PF05974|PTHR30565|PTHR30565:SF0|SSF47240
yciG|yciG|AP_001885.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR019626	Stress-induced protein, KGG, repeat		PF10685
yciH|yciH|AP_001908.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001950|IPR005872	Archaeal/bacterial translation initiation factor SUI1|Translation initiation factor SUI1	GO:0003743|GO:0006413	G3DSA:3.30.780.10|PF01253|PIRSF037511|PS50296|SSF55159|TIGR01158
yciI|yciI|AP_001877.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR005545|IPR011008	Dimeric alpha-beta barrel|YCII-related		G3DSA:3.30.70.1060|PF03795|SSF54909
yciK|yciK|AP_001897.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002198|IPR002347|IPR016040|IPR020904	Glucose/ribitol dehydrogenase|NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR|Short-chain dehydrogenase/reductase, conserved site	GO:0008152|GO:0016491	G3DSA:3.40.50.720|PF00106|PR00081|PS00061|PTHR24316|SSF51735
yciM|yciM|AP_001906.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR011990|IPR013026|IPR013105|IPR019734	Tetratricopeptide TPR2|Tetratricopeptide repeat|Tetratricopeptide repeat-containing domain|Tetratricopeptide-like helical	GO:0005515	G3DSA:1.25.40.10|PF07719|PF13176|PS50005|PS50293|PTHR23083|SM00028|SSF48452
yciN|yciN|AP_001899.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR019633	Protein of unknown function DUF2498		PF10692
yciO|yciO|AP_001893.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR006070|IPR017945	DHBP synthase RibB-like alpha/beta domain|YrdC-like domain	GO:0003725	G3DSA:3.90.870.10|PF01300|PS51163|PTHR17490|SSF55821|TIGR00057
yciQ|yciQ|AP_001894.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR018702	Protein of unknown function DUF2207, membrane		PF09972
yciS|yciS|AP_001905.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR010445	Protein of unknown function DUF1049		PF06305
yciT|yciT|AP_001910.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001034|IPR011991|IPR014036|IPR018356	DeoR C-terminal sensor domain|HTH DeoR N-terminal domain|Transcription regulator, HTH DeoR-type, conserved site|Winged helix-turn-helix DNA-binding domain	GO:0003700|GO:0005622|GO:0006355	G3DSA:1.10.10.10|G3DSA:3.40.50.1360|PF00455|PF08220|PR00037|PS00894|PS51000|PTHR30363|PTHR30363:SF0|SM00420|SSF100950|SSF46785
yciU|yciU|AP_001874.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR007376	dsDNA mimic, putative		G3DSA:3.10.450.140|MF_00680|PD020447|PF04269|PIRSF004916|SSF102816
yciV|yciV|AP_001892.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003141|IPR004013|IPR016195	PHP, C-terminal|Polymerase/histidinol phosphatase, N-terminal|Polymerase/histidinol phosphatase-like	GO:0003677|GO:0003824|GO:0003887|GO:0006260	G3DSA:3.20.20.140|PF02811|PTHR30007|PTHR30007:SF2|SM00481|SSF89550
yciW|yciW|AP_001913.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091				G3DSA:1.20.1290.10|SSF69118
ycjD|ycjD|AP_001915.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004603|IPR007569|IPR011335	DNA mismatch endonuclease vsr|Domain of unknown function DUF559|Restriction endonuclease  type II-like	GO:0004519|GO:0006298	G3DSA:3.40.960.10|PF04480|SSF52980
ycjF|ycjF|AP_001949.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR006507|IPR021147	Protein of unknown function DUF697|Uncharacterised protein family UPF0283		MF_01085|PF05128|TIGR01620
ycjG|ycjG|AP_001952.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001354|IPR013341|IPR013342|IPR018110|IPR026911	L-Ala-D/L-Glu epimerase|Mandelate racemase/muconate lactonizing enzyme|Mandelate racemase/muconate lactonizing enzyme, C-terminal|Mandelate racemase/muconate lactonizing enzyme, N-terminal|Mandelate racemase/muconate lactonizing enzyme, conserved site	GO:0003824|GO:0008152|GO:0009063|GO:0016855	G3DSA:3.20.20.120|G3DSA:3.30.390.10|PF01188|PF02746|PS00908|PS00909|PTHR13794|PTHR13794:SF10|SM00922|SSF51604|SSF54826
ycjM|ycjM|AP_001935.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR006047|IPR013780|IPR013781|IPR015902|IPR016377|IPR017853	Glycoside hydrolase, catalytic domain|Glycoside hydrolase, family 13|Glycoside hydrolase, superfamily|Glycosyl hydrolase, family 13, all-beta|Glycosyl hydrolase, family 13, catalytic domain|Sucrose phosphorylase	GO:0003824|GO:0005975|GO:0005985|GO:0009018|GO:0043169	G3DSA:2.60.40.1180|G3DSA:3.20.20.80|G3DSA:3.90.400.10|PF00128|PIRSF003059|PTHR10357|PTHR10357:SF53|SSF51445
ycjN|ycjN|AP_001936.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR006059	Bacterial extracellular solute-binding, family 1	GO:0005215|GO:0006810	G3DSA:3.40.190.10|PF01547|PS51257|SSF53850
ycjO|ycjO|AP_001937.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000515	Binding-protein-dependent transport systems inner membrane component	GO:0005215|GO:0006810|GO:0016020	G3DSA:1.10.3720.10|PF00528|PS50928|PTHR32371|PTHR32371:SF0|SSF161098
ycjP|ycjP|AP_001938.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000515	Binding-protein-dependent transport systems inner membrane component	GO:0005215|GO:0006810|GO:0016020	G3DSA:1.10.3720.10|PF00528|PS50928|PTHR32243|SSF161098
ycjQ|ycjQ|AP_001939.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002085|IPR011032|IPR013149|IPR016040	Alcohol dehydrogenase superfamily, zinc-type|Alcohol dehydrogenase, C-terminal|GroES-like|NAD(P)-binding domain	GO:0008270|GO:0016491|GO:0055114	G3DSA:3.40.50.720|G3DSA:3.90.180.10|PF00107|PTHR11695|PTHR11695:SF28|SSF50129|SSF51735
ycjR|ycjR|AP_001940.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR013022	Xylose isomerase-like, TIM barrel domain		G3DSA:3.20.20.150|PF01261|PTHR12110|SSF51658
ycjS|ycjS|AP_001941.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000683|IPR004104|IPR016040	NAD(P)-binding domain|Oxidoreductase, C-terminal|Oxidoreductase, N-terminal	GO:0008152|GO:0016491|GO:0055114	G3DSA:3.30.360.10|G3DSA:3.40.50.720|PF01408|PF02894|PTHR22604|PTHR22604:SF14|SSF51735|SSF55347
ycjT|ycjT|AP_001942.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR005194|IPR005195|IPR005196|IPR008928|IPR011013|IPR012341|IPR017045	Galactose mutarotase-like domain|Glycoside hydrolase, family 65, C-terminal|Glycoside hydrolase, family 65, N-terminal|Glycoside hydrolase, family 65, central catalytic|Maltose phosphorylase/glycosyl hydrolase/vacuolar acid trehalase|Six-hairpin glycosidase|Six-hairpin glycosidase-like	GO:0003824|GO:0005975|GO:0030246	G3DSA:1.50.10.10|G3DSA:2.60.420.10|G3DSA:2.70.98.40|PF03632|PF03633|PF03636|PIRSF036289|PTHR11051|PTHR11051:SF4|SSF48208|SSF74650
ycjU|ycjU|AP_001943.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR005833|IPR006402|IPR010972|IPR010976|IPR023198|IPR023214	Beta-phosphoglucomutase|Beta-phosphoglucomutase hydrolase|HAD-like domain|HAD-superfamily hydrolase, subfamily IA, variant 3|Haloacid dehalogenase/epoxide hydrolase|Phosphoglycolate phosphatase, domain 2	GO:0000287|GO:0005975|GO:0008152|GO:0008801|GO:0016787	G3DSA:1.10.150.240|G3DSA:3.40.50.1000|PF00702|PR00413|PTHR18901|SSF56784|TIGR01509|TIGR01990|TIGR02009
ycjV|ycjV|AP_001944.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003439|IPR003593|IPR008995|IPR012340|IPR017871|IPR027417	AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|Molybdate/tungstate binding, C-terminal|Nucleic acid-binding, OB-fold|P-loop containing nucleoside triphosphate hydrolase	GO:0000166|GO:0005524|GO:0016887|GO:0017111	G3DSA:2.40.50.100|G3DSA:2.40.50.140|G3DSA:3.40.50.300|PF00005|PS00211|PS50893|PTHR24220|PTHR24220:SF151|SM00382|SSF50331|SSF52540
ycjW|ycjW|AP_001947.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000843|IPR010982	Lambda repressor-like, DNA-binding domain|Transcription regulator HTH, LacI	GO:0003677|GO:0003700|GO:0005622|GO:0006355	G3DSA:1.10.260.40|G3DSA:3.40.50.2300|PF00356|PF13377|PR00036|PS00356|PS50932|PTHR30146|PTHR30146:SF7|SM00354|SSF47413|SSF53822
ycjX|ycjX|AP_001948.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR007413	Protein of unknown function DUF463, YcjX-like protein		PF04317|PIRSF019381
ycjY|ycjY|AP_001955.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091				G3DSA:3.40.50.1820|PF12695|PTHR17630|PTHR17630:SF26|SSF53474
ycjZ|ycjZ|AP_001956.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000847|IPR005119|IPR011991	LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain	GO:0003700|GO:0006355	G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PR00039|PS50931|PTHR32459|PTHR32459:SF0|SSF46785|SSF53850
ydaC|ydaC|AP_001975.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR009572	Protein of unknown function DUF1187		PD055514|PF06688
ydaE|ydaE|AP_001980.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR007308	Protein of unknown function DUF408		PF04181
ydaF|ydaF|AP_001983.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR009821	Protein of unknown function DUF1391		PD019047|PF07151
ydaG|ydaG|AP_001984.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR009060	UBA-like	GO:0005515	SSF46934
ydaL|ydaL|AP_001968.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002625	Smr protein/MutS2 C-terminal		PF01713|SM00463|SSF160443
ydaM|ydaM|AP_001969.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000014|IPR000160|IPR000700|IPR001054|IPR001610|IPR013656	Adenylyl cyclase class-3/4/guanylyl cyclase|GGDEF domain|PAC motif|PAS domain|PAS fold-4|PAS-associated, C-terminal	GO:0000155|GO:0000160|GO:0004871|GO:0007165|GO:0009190|GO:0016849|GO:0035556	G3DSA:3.30.450.20|G3DSA:3.30.70.270|PF00990|PF08448|PF13188|PS50113|PS50887|SM00086|SM00091|SM00267|SSF55073|SSF55785|TIGR00229|TIGR00254
ydaN|ydaN|AP_001970.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002523|IPR023714	Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB|Zinc transport protein ZntB	GO:0005385|GO:0005886|GO:0016020|GO:0030001|GO:0046873|GO:0055085|GO:0071577	G3DSA:1.20.58.340|MF_01565|PF01544|PTHR21535|SSF143865|SSF144083
ydaO|ydaO|AP_001972.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR011063|IPR012089|IPR014729	2-thiocytidine tRNA biosynthesis protein, TtcA|Rossmann-like alpha/beta/alpha sandwich fold|tRNA(Ile)-lysidine/2-thiocytidine synthase	GO:0005524|GO:0008033	G3DSA:3.40.50.620|MF_01850|PF01171|PIRSF004976|PTHR11807|PTHR11807:SF4|SSF52402
ydaQ|ydaQ|AP_001974.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR009634	Bacteriophage 933W, Xis excisionase		PF06806
ydaS|ydaS|AP_001986.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001387|IPR010982	Helix-turn-helix|Lambda repressor-like, DNA-binding domain	GO:0003677|GO:0043565	G3DSA:1.10.260.40|PF01381|SSF47413
ydaT|ydaT|AP_001987.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR009364|IPR023345	Bacteriophage phi-80 CII-like|Bacteriophage phi-80 CII-like domain		G3DSA:1.10.3600.10|PF06254
ydaU|ydaU|AP_001988.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR010781	Bacteriophage PBC5, Orf49		PF07120
ydaV|ydaV|AP_001989.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002611|IPR003593|IPR027417	AAA+ ATPase domain|IstB-like ATP-binding protein|P-loop containing nucleoside triphosphate hydrolase	GO:0000166|GO:0005524|GO:0017111	G3DSA:3.40.50.300|PF01695|SM00382|SSF52540
ydaW|ydaW|AP_001990.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR011991|IPR012432	Protein of unknown function DUF1627|Winged helix-turn-helix DNA-binding domain		G3DSA:1.10.10.10|PF07789|SSF46785
ydbC|ydbC|AP_002031.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001395|IPR023210	Aldo/keto reductase|NADP-dependent oxidoreductase domain		G3DSA:3.20.20.100|PF00248|PTHR11732|PTHR11732:SF114|SSF51430
ydbD|ydbD|AP_002032.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR024497	Protein of unknown function DUF2773		PD029376|PF10971
ydbH|ydbH|AP_002008.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR021730	Dicarboxylate transport		PF11739
ydbJ|ydbJ|AP_002005.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR005590	Protein of unknown function DUF333		PF03891|PS51257
ydbK|ydbK|AP_002004.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001450|IPR002869|IPR002880|IPR009014|IPR011766|IPR011895|IPR015941|IPR017896|IPR017900|IPR019456|IPR019752	4Fe-4S binding domain|4Fe-4S ferredoxin, iron-sulphur binding, conserved site|4Fe-4S ferredoxin-type, iron-sulpur binding domain|Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal|Pyruvate-flavodoxin oxidoreductase|Pyruvate-flavodoxin oxidoreductase, EKR domain|Pyruvate-flavodoxin oxidoreductase, central domain|Pyruvate/ketoisovalerate oxidoreductase, catalytic domain|Thiamine pyrophosphate enzyme, C-terminal TPP-binding|Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II|Transketolase-like, C-terminal	GO:0003824|GO:0005506|GO:0008152|GO:0009055|GO:0016491|GO:0016903|GO:0022900|GO:0030976|GO:0051536|GO:0055114	G3DSA:3.30.70.20|G3DSA:3.40.50.920|G3DSA:3.40.50.970|G3DSA:3.40.920.10|G3DSA:4.10.780.10|PF00037|PF01558|PF01855|PF02775|PF10371|PIRSF000159|PS00198|PS51379|PTHR32154|PTHR32154:SF0|SM00890|SSF52518|SSF52922|SSF53323|SSF54862|TIGR02176
ydbL|ydbL|AP_002010.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR008309	Uncharacterised conserved protein UCP025560		PF07027|PIRSF025560
ydcA|ydcA|AP_002042.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091				PD052090
ydcC|ydcC|AP_002083.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002559	Transposase, IS4-like	GO:0003677|GO:0004803|GO:0006313	PF01609|PF13808|PTHR30298
ydcD|ydcD|AP_002080.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091				
ydcE|ydcE|AP_002084.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004370|IPR014347|IPR017284	4-oxalocrotonate tautomerase|Tautomerase PptA|Tautomerase/MIF superfamily	GO:0005737|GO:0006725|GO:0016853|GO:0016862	G3DSA:3.30.429.20|MF_00718|PF01361|PIRSF037799|SSF55331
ydcF|ydcF|AP_002039.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003848|IPR014729	Domain of unknown function DUF218|Rossmann-like alpha/beta/alpha sandwich fold		G3DSA:3.40.50.620|PF02698
ydcH|ydcH|AP_002049.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR007420	Protein of unknown function DUF465		PF04325
ydcI|ydcI|AP_002046.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000847|IPR005119|IPR011991	LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain	GO:0003700|GO:0006355	G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PR00039|PS50931|PTHR30214|SSF46785|SSF53850
ydcJ|ydcJ|AP_002047.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR009770	Domain of unknown function DUF1338		PF07063|PTHR30608|PTHR30608:SF2
ydcK|ydcK|AP_002051.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR011004	Trimeric LpxA-like	GO:0016740	G3DSA:2.160.10.10|SSF51161
ydcL|ydcL|AP_002054.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR021747	Protein of unknown function DUF3313		PF11769|PS51257
ydcM|ydcM|AP_002055.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001959|IPR010095|IPR021027	Transposase IS605, OrfB, C-terminal|Transposase, probable, IS891/IS1136/IS1341|Transposase, putative, helix-turn-helix domain		PF01385|PF07282|PF12323|PTHR30405|PTHR30405:SF0|TIGR01766
ydcN|ydcN|AP_002057.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001387|IPR010982|IPR011051|IPR013096|IPR014710	Cupin 2, conserved barrel|Helix-turn-helix|Lambda repressor-like, DNA-binding domain|RmlC-like cupin domain|RmlC-like jelly roll fold	GO:0003677|GO:0043565	G3DSA:1.10.260.40|G3DSA:2.60.120.10|PF01381|PF07883|PS50943|SM00530|SSF47413|SSF51182
ydcO|ydcO|AP_002056.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004711	Benzoate transporter	GO:0016021|GO:0042919|GO:0042925	PF03594|PTHR30199|PTHR30199:SF0|TIGR00843
ydcP|ydcP|AP_002058.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001539|IPR020988	Peptidase U32|Peptidase U32, collagenase	GO:0006508|GO:0008233	PF01136|PF12392|PS01276|PTHR30217|PTHR30217:SF0
ydcQ|ydcQ|AP_002061.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001387|IPR005357|IPR010982	Helix-turn-helix|Lambda repressor-like, DNA-binding domain|Uncharacterised domain UPF0150	GO:0003677|GO:0043565	G3DSA:1.10.260.40|PF01381|PF03681|PS50943|SM00530|SSF143100|SSF47413
ydcR|ydcR|AP_002062.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000524|IPR004839|IPR011991|IPR015421|IPR015424	Aminotransferase, class I/classII|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Transcription regulator HTH, GntR|Winged helix-turn-helix DNA-binding domain	GO:0003700|GO:0003824|GO:0005622|GO:0006355|GO:0009058|GO:0030170	G3DSA:1.10.10.10|G3DSA:3.40.640.10|PF00155|PF00392|PS50949|PTHR11751|PTHR11751:SF18|SM00345|SSF46785|SSF53383
ydcS|ydcS|AP_002063.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001188|IPR006059	Bacterial extracellular solute-binding, family 1|Bacterial periplasmic spermidine/putrescine-binding protein	GO:0005215|GO:0006810|GO:0015846|GO:0019808|GO:0042597	G3DSA:3.40.190.10|PF01547|PR00909|SSF53850
ydcT|ydcT|AP_002064.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003439|IPR003593|IPR008995|IPR013611|IPR017871|IPR027417	AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|Molybdate/tungstate binding, C-terminal|P-loop containing nucleoside triphosphate hydrolase|Transport-associated OB, type 2	GO:0000166|GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0016887|GO:0017111|GO:0043190	G3DSA:3.40.50.300|PF00005|PF08402|PS00211|PS50893|PTHR24220|PTHR24220:SF150|SM00382|SSF50331|SSF52540
ydcU|ydcU|AP_002065.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000515	Binding-protein-dependent transport systems inner membrane component	GO:0005215|GO:0006810|GO:0016020	G3DSA:1.10.3720.10|PF00528|PS50928|PTHR30193|PTHR30193:SF0|SSF161098
ydcV|ydcV|AP_002066.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000515	Binding-protein-dependent transport systems inner membrane component	GO:0005215|GO:0006810|GO:0016020	G3DSA:1.10.3720.10|PF00528|PTHR30193|PTHR30193:SF0|SSF161098
ydcW|ydcW|AP_002067.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR015590|IPR016160|IPR016161|IPR016162|IPR016163|IPR017749	1-pyrroline dehydrogenase|Aldehyde dehydrogenase domain|Aldehyde dehydrogenase, C-terminal|Aldehyde dehydrogenase, N-terminal|Aldehyde dehydrogenase, conserved site|Aldehyde/histidinol dehydrogenase	GO:0008152|GO:0009447|GO:0016491|GO:0016620|GO:0019145|GO:0051287|GO:0055114	G3DSA:3.40.309.10|G3DSA:3.40.605.10|MF_01275|PF00171|PS00687|PTHR11699|PTHR11699:SF64|SSF53720|TIGR03374
ydcX|ydcX|AP_002068.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR019689	Pseudomonas phage PaP3, Orf56		PF10753
ydcY|ydcY|AP_002069.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR019671	Protein of unknown function DUF2526		PF10735
ydcZ|ydcZ|AP_002070.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR006750	Protein of unknown function DUF606		PF04657
yddA|yddA|AP_002119.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003439|IPR003593|IPR010509|IPR011527|IPR017871|IPR017940|IPR027417	AAA+ ATPase domain|ABC transporter, N-terminal|ABC transporter, conserved site|ABC transporter, integral membrane type 1|ABC transporter, transmembrane domain, type 1|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase	GO:0000166|GO:0005524|GO:0006810|GO:0016020|GO:0016021|GO:0016887|GO:0017111|GO:0042626|GO:0055085	G3DSA:1.20.1560.10|G3DSA:3.40.50.300|PF00005|PF06472|PS00211|PS50893|PS50929|PTHR11384|PTHR11384:SF2|SM00382|SSF52540|SSF90123
yddB|yddB|AP_002118.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000531|IPR012910	TonB-dependent receptor, beta-barrel|TonB-dependent receptor, plug	GO:0004872|GO:0005215|GO:0006810|GO:0016020	G3DSA:2.170.130.10|G3DSA:2.40.170.20|PF07715|SSF56935
yddE|yddE|AP_002087.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003719	Phenazine biosynthesis PhzF protein	GO:0003824|GO:0009058	G3DSA:3.10.310.10|PF02567|PIRSF016184|PTHR13774|PTHR13774:SF12|SSF54506|TIGR00654
yddG|yddG|AP_002096.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000620	Drug/metabolite transporter	GO:0016020	PF00892|SSF103481
yddH|yddH|AP_002085.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002563|IPR012349	FMN-binding split barrel|Flavin reductase-like, FMN-binding	GO:0010181|GO:0016491|GO:0042602|GO:0055114	G3DSA:2.30.110.10|PF01613|SM00903|SSF50475
yddK|yddK|AP_002094.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001611	Leucine-rich repeat	GO:0005515	G3DSA:3.80.10.10|PF00560|PR00019|PS51450|SSF52058
yddL|yddL|AP_002095.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001702|IPR001897|IPR023614	Porin domain|Porin, Gram-negative type|Porin, gammaproteobacterial	GO:0006810|GO:0015288|GO:0016020	G3DSA:2.40.160.10|PF00267|PR00183|SSF56935
yddM|yddM|AP_002100.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001387|IPR010982|IPR013430	Helix-turn-helix|Lambda repressor-like, DNA-binding domain|Toxin-antitoxin system, antidote protein, HigA	GO:0003677|GO:0043565	G3DSA:1.10.260.40|PF01381|PS50943|SM00530|SSF47413|TIGR02607
yddV|yddV|AP_002113.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000160|IPR001054	Adenylyl cyclase class-3/4/guanylyl cyclase|GGDEF domain	GO:0009190|GO:0016849|GO:0035556	G3DSA:3.30.70.270|PF00990|PS50887|PTHR10919|PTHR10919:SF356|SM00267|SSF55073|TIGR00254
yddW|yddW|AP_002114.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003790|IPR013781|IPR017853	Glycoside hydrolase, catalytic domain|Glycoside hydrolase, superfamily|Protein of unknown function DUF187	GO:0003824|GO:0005975	G3DSA:3.20.20.80|PF02638|PS51257|PTHR30032|PTHR30032:SF2|SSF51445
ydeA|ydeA|AP_002149.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR011701|IPR016196|IPR020846|IPR023495	Major facilitator superfamily|Major facilitator superfamily domain|Major facilitator superfamily domain, general substrate transporter|Sugar efflux transporter, putative	GO:0016021|GO:0055085	G3DSA:1.20.1250.20|MF_00517|PF07690|PS50850|PTHR24003|SSF103473
ydeE|ydeE|AP_002155.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR011701|IPR016196|IPR020846	Major facilitator superfamily|Major facilitator superfamily domain|Major facilitator superfamily domain, general substrate transporter	GO:0016021|GO:0055085	G3DSA:1.20.1250.20|PF07690|PS50850|PTHR24003|PTHR24003:SF18|SSF103473
ydeH|ydeH|AP_002156.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000160|IPR001054|IPR025991	Adenylyl cyclase class-3/4/guanylyl cyclase|GGDEF domain|MCP-signal associated domain	GO:0009190|GO:0016849|GO:0035556	G3DSA:3.30.70.270|PF00990|PF13682|PS50887|SM00267|SSF55073|TIGR00254
ydeI|ydeI|AP_002157.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR005220|IPR016052	Bacteriophage 933W, L0136|Viral OB-fold, YgiW		G3DSA:2.40.50.200|PF04076|SSF101756|TIGR00156
ydeJ|ydeJ|AP_002158.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR008136	CinA, C-terminal		G3DSA:3.90.950.20|PF02464|PTHR13939|SSF142433|TIGR00199
ydeK|ydeK|AP_002131.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR011050|IPR012332|IPR013425|IPR024973	Autotransporter-associated beta strand repeat|Extended signal peptide region|P22 tailspike C-terminal domain-like|Pectin lyase fold/virulence factor		G3DSA:2.160.20.20|PF13018|PS51257|SSF51126|TIGR02601
ydeM|ydeM|AP_002120.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR007197|IPR013785|IPR023867|IPR023885	4Fe4S-binding SPASM domain|Aldolase-type TIM barrel|Anaerobic sulphatase maturase, radical SAM|Radical SAM	GO:0003824|GO:0016491|GO:0051536	G3DSA:3.20.20.70|PD968187|PF04055|PF13186|PF13353|PTHR30088|PTHR30088:SF0|SSF102114|TIGR03942|TIGR04085
ydeN|ydeN|AP_002121.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000917|IPR017849|IPR017850|IPR024607	Alkaline phosphatase-like, alpha/beta/alpha|Alkaline-phosphatase-like, core domain|Sulfatase|Sulfatase, conserved site	GO:0003824|GO:0008152|GO:0008484	G3DSA:3.30.1120.10|G3DSA:3.40.720.10|PF00884|PS00149|PS00523|PTHR10342|PTHR10342:SF85|SSF53649
ydeO|ydeO|AP_002122.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR009057|IPR018060|IPR018062|IPR020449	DNA binding HTH domain, AraC-type|HTH domain AraC-type, conserved site|Homeodomain-like|Transcription regulator HTH, AraC- type	GO:0003677|GO:0003700|GO:0005622|GO:0006355|GO:0043565	G3DSA:1.10.10.60|PF12833|PR00032|PS00041|PS01124|PTHR11019|PTHR11019:SF11|SM00342|SSF46689
ydeP|ydeP|AP_002123.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR006656|IPR006657|IPR009010|IPR010046	Aspartate decarboxylase-like domain|Molybdopterin oxidoreductase|Molydopterin dinucleotide-binding domain|Oxidoreductase alpha (molybdopterin) subunit	GO:0008863|GO:0016491|GO:0030151|GO:0051539|GO:0055114	G3DSA:2.40.40.20|G3DSA:3.40.228.10|G3DSA:3.40.50.740|PF00384|PF01568|PIRSF000144|PTHR11615|PTHR11615:SF38|SSF50692|SSF53706|TIGR01701
ydeQ|ydeQ|AP_002124.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000259|IPR008966|IPR015243	Adhesion domain|FimH, mannose-binding|Fimbrial-type adhesion domain	GO:0007155|GO:0009289	G3DSA:2.60.40.1090|PF00419|PF09160|SSF49401
ydeR|ydeR|AP_002125.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000259|IPR008966	Adhesion domain|Fimbrial-type adhesion domain	GO:0007155|GO:0009289	G3DSA:2.60.40.1090|PF00419|SSF49401
ydeS|ydeS|AP_002126.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000259|IPR008966	Adhesion domain|Fimbrial-type adhesion domain	GO:0007155|GO:0009289	G3DSA:2.60.40.1090|PF00419|SSF49401
ydeT|ydeT|AP_002127.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000015|IPR025949	Fimbrial biogenesis outer membrane usher protein|PapC-like C-terminal domain	GO:0005215|GO:0006810|GO:0016020	PF00577|PF13953|PTHR30451|PTHR30451:SF0
ydeV|ydeV|AP_002132.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR018484|IPR018485	Carbohydrate kinase, FGGY, C-terminal|Carbohydrate kinase, FGGY, N-terminal	GO:0005975|GO:0016773	G3DSA:3.30.420.40|PF00370|PF02782|PTHR10196|PTHR10196:SF27|SSF53067
ydeW|ydeW|AP_002133.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR007324|IPR011991	Sugar-binding domain, putative|Winged helix-turn-helix DNA-binding domain	GO:0030246	G3DSA:1.10.10.10|G3DSA:3.40.50.1360|PF04198|PTHR32101|PTHR32101:SF1|SSF100950
ydfA|ydfA|AP_002193.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR009821	Protein of unknown function DUF1391		PD019047|PF07151
ydfC|ydfC|AP_002195.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091				
ydfD|ydfD|AP_002197.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR009954	Protein of unknown function DUF1482		PF07358
ydfG|ydfG|AP_002160.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002198|IPR002347|IPR016040	Glucose/ribitol dehydrogenase|NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR	GO:0008152|GO:0016491	G3DSA:3.40.50.720|PF00106|PIRSF000126|PR00080|PR00081|PTHR24322|PTHR24322:SF18|SSF51735
ydfH|ydfH|AP_002161.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000524|IPR008920|IPR011711|IPR011991|IPR027376	FadR/GntR C-terminal domain|Fatty acid responsive transcription factor FadR, C-terminal|GntR, C-terminal|Transcription regulator HTH, GntR|Winged helix-turn-helix DNA-binding domain	GO:0000062|GO:0003677|GO:0003700|GO:0005622|GO:0006355|GO:0019217	G3DSA:1.10.10.10|G3DSA:1.20.120.530|PF00392|PF07729|PR00035|PS50949|PTHR11751|PTHR11751:SF20|SM00345|SM00895|SSF46785|SSF48008
ydfI|ydfI|AP_002163.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000669|IPR008927|IPR013118|IPR013131|IPR013328|IPR016040|IPR023027	6-phosphogluconate dehydrogenase, C-terminal-like|Dehydrogenase, multihelical|Mannitol dehydrogenase|Mannitol dehydrogenase, C-terminal|Mannitol dehydrogenase, N-terminal|Mannitol dehydrogenase, conserved site|NAD(P)-binding domain	GO:0003824|GO:0008152|GO:0008926|GO:0016491|GO:0016616|GO:0050662|GO:0055114	G3DSA:1.10.1040.10|G3DSA:3.40.50.720|PF01232|PF08125|PR00084|PS00974|PTHR30562|PTHR30562:SF2|SSF48179|SSF51735
ydfJ|ydfJ|AP_002164.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004736|IPR005828|IPR016196|IPR020846	Citrate-proton symport|General substrate transporter|Major facilitator superfamily domain|Major facilitator superfamily domain, general substrate transporter	GO:0005215|GO:0006810|GO:0016021|GO:0022857|GO:0055085	G3DSA:1.20.1250.20|PF00083|PS50850|PTHR24063|PTHR24063:SF153|SSF103473|TIGR00883
ydfO|ydfO|AP_002171.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR009833	Bacteriophage DE3, Orf10033		G3DSA:3.30.1810.10|PD021249|PF07166|SSF160419
ydfP|ydfP|AP_002175.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR019659	Protein of unknown function DUF2514		PF10721
ydfQ|ydfQ|AP_002176.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002196|IPR023346|IPR023347	Glycoside hydrolase, family 24|Lysozyme domain|Lysozyme-like domain	GO:0003796|GO:0009253|GO:0016998	G3DSA:1.10.530.40|PF00959|SSF53955
ydfR|ydfR|AP_002177.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR009759	Bacteriophage ES18, Gp24		PF07041
ydfT|ydfT|AP_002181.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001305|IPR003222	Antitermination protein|Heat shock protein DnaJ, cysteine-rich domain	GO:0003677|GO:0006355|GO:0031072|GO:0051082	G3DSA:2.10.230.10|PF03589|SSF57938
ydfU|ydfU|AP_002182.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003615|IPR010373	HNH nuclease|Protein of unknown function DUF968		PF06147|SM00507
ydfX|ydfX|AP_002190.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR009364|IPR023345	Bacteriophage phi-80 CII-like|Bacteriophage phi-80 CII-like domain		G3DSA:1.10.3600.10|PF06254
ydfZ|ydfZ|AP_002162.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR017704	Putative selenium-binding protein YdfZ		PF14001|TIGR03318
ydgA|ydgA|AP_002235.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR010352	Protein of unknown function DUF945		PF06097
ydgC|ydgC|AP_002228.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR009707	GlpM		PD028709|PF06942
ydgD|ydgD|AP_002219.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001254|IPR008256|IPR009003|IPR018114	Peptidase S1|Peptidase S1, trypsin family, active site|Peptidase S1B, glutamyl endopeptidase I|Trypsin-like cysteine/serine peptidase domain	GO:0003824|GO:0004252|GO:0006508|GO:0008236	G3DSA:2.40.10.10|PF00089|PR00839|PS00134|PS00135|SM00020|SSF50494
ydgG|ydgG|AP_002222.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002549	Uncharacterised protein family UPF0118		PF01594|PTHR21716
ydgH|ydgH|AP_002225.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR010854|IPR025539|IPR025543	Dodecin-like|Domain of unknown function DUF1471|YdgH protein		G3DSA:3.30.1660.10|PF07338|PIRSF014774|SSF159871
ydgI|ydgI|AP_002226.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002293|IPR004754	Amino acid antiporter|Amino acid/polyamine transporter I	GO:0003333|GO:0006865|GO:0015171|GO:0016020|GO:0016021	PF13520|PIRSF006060|PTHR11785|PTHR11785:SF77|TIGR00905
ydgJ|ydgJ|AP_002245.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000683|IPR004104|IPR016040	NAD(P)-binding domain|Oxidoreductase, C-terminal|Oxidoreductase, N-terminal	GO:0008152|GO:0016491|GO:0055114	G3DSA:3.30.360.10|G3DSA:3.40.50.720|PF01408|PF02894|PTHR22604|PTHR22604:SF53|SSF51735
ydgK|ydgK|AP_002248.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR019690	Protein of unknown function DUF2569		PF10754
ydgR|ydgR|AP_002256.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000109|IPR005279|IPR016196|IPR018456|IPR020846|IPR023517	Amino acid/peptide transporter family|Amino acid/peptide transporter family, dipeptide and tripeptide permease A|Major facilitator superfamily domain|Major facilitator superfamily domain, general substrate transporter|PTR2 family proton/oligopeptide symporter, conserved site|Proton-dependent oligopeptide transporter family	GO:0005215|GO:0006810|GO:0006857|GO:0015197|GO:0015833|GO:0016020	G3DSA:1.20.1250.20|MF_01878|PF00854|PS01022|PS01023|PS50850|PTHR11654|PTHR11654:SF6|SSF103473|TIGR00924
ydgT|ydgT|AP_002247.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR007985	Haemolysin expression modulating, HHA		G3DSA:1.20.1280.40|PF05321|SSF68989
ydhA|ydhA|AP_002261.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR018660	C-type lysozyme, inhibitor		PF09864|PS51257|SSF141488
ydhB|ydhB|AP_002281.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000847|IPR005119|IPR011991	LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain	GO:0003700|GO:0006355	G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PTHR30126|SSF46785|SSF53850
ydhC|ydhC|AP_002282.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004812|IPR011701|IPR016196|IPR020846	Drug resistance transporter Bcr/CflA subfamily|Major facilitator superfamily|Major facilitator superfamily domain|Major facilitator superfamily domain, general substrate transporter	GO:0005215|GO:0006810|GO:0016021|GO:0055085	G3DSA:1.20.1250.20|PF07690|PS50850|PTHR24003|SSF103473|TIGR00710
ydhD|ydhD|AP_002276.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002109|IPR004480|IPR012336|IPR014434	Glutaredoxin|Monothiol glutaredoxin|Monothiol glutaredoxin-related|Thioredoxin-like fold	GO:0009055|GO:0015035|GO:0045454	G3DSA:3.40.30.10|PF00462|PIRSF005894|PS51354|PTHR10293|PTHR10293:SF27|SSF52833|TIGR00365
ydhF|ydhF|AP_002269.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001395|IPR020471|IPR023210	Aldo/keto reductase|Aldo/keto reductase subgroup|NADP-dependent oxidoreductase domain	GO:0016491|GO:0055114	G3DSA:3.20.20.100|PF00248|PR00069|PTHR11732|PTHR11732:SF10|SSF51430
ydhH|ydhH|AP_002262.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR005338	Anhydro-N-acetylmuramic acid kinase	GO:0005524|GO:0006040|GO:0009254|GO:0016773	G3DSA:3.30.420.40|MF_01270|PF03702|PTHR30605|SSF53067
ydhI|ydhI|AP_002265.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR012451	Protein of unknown function DUF1656		PF07869
ydhJ|ydhJ|AP_002266.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR006143	RND efflux pump, membrane fusion protein	GO:0016020|GO:0055085	G3DSA:2.40.50.100|PF00529|PTHR30367|PTHR30367:SF0|SSF111369|TIGR01730
ydhK|ydhK|AP_002267.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR006726	Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein	GO:0005886|GO:0006810	PF04632|PTHR30509|PTHR30509:SF0
ydhL|ydhL|AP_002270.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR010710	Protein of unknown function DUF1289		PF06945
ydhM|ydhM|AP_002271.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001647|IPR009057|IPR011075|IPR015893	DNA-binding HTH domain, TetR-type|Homeodomain-like|Tetracycline transcriptional regulator, TetR-like, C-terminal|Tetracycline transcriptional regulator, TetR-related, C-terminal	GO:0003677	G3DSA:1.10.357.10|PF00440|PS50977|SSF46689|SSF48498
ydhO|ydhO|AP_002277.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000064	Endopeptidase, NLPC/P60 domain		G3DSA:3.90.1720.10|PF00877|PTHR21666|PTHR21666:SF1|SSF54001
ydhP|ydhP|AP_002279.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR011701|IPR016196|IPR020846	Major facilitator superfamily|Major facilitator superfamily domain|Major facilitator superfamily domain, general substrate transporter	GO:0016021|GO:0055085	G3DSA:1.20.1250.20|PF07690|PS50850|PTHR24003|SSF103473
ydhQ|ydhQ|AP_002286.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004899|IPR011050|IPR012332	P22 tailspike C-terminal domain-like|Pectin lyase fold/virulence factor|Pertactin, central region		G3DSA:2.160.20.20|PF03212|SSF51126
ydhR|ydhR|AP_002287.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR011008|IPR014910	Dimeric alpha-beta barrel|Mono-oxygenase, YdhR		PF08803|SSF54909
ydhS|ydhS|AP_002288.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR016040	NAD(P)-binding domain		G3DSA:3.40.50.720|PF13454|PTHR13706|PTHR13706:SF13|SSF51905
ydhU|ydhU|AP_002290.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR011577|IPR016174	Cytochrome b561, bacterial/Ni-hydrogenase|Di-haem cytochrome, transmembrane	GO:0009055|GO:0016020|GO:0016021|GO:0022904	G3DSA:1.20.950.20|PF01292|SSF81342
ydhV|ydhV|AP_002293.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001203|IPR013983|IPR013984|IPR013985	Aldehyde ferredoxin oxidoreductase, C-terminal|Aldehyde ferredoxin oxidoreductase, N-terminal|Aldehyde ferredoxin oxidoreductase, domain 2|Aldehyde ferredoxin oxidoreductase, domain 3	GO:0009055|GO:0016491|GO:0016625|GO:0051536|GO:0055114	G3DSA:1.10.569.10|G3DSA:1.10.599.10|G3DSA:3.60.9.10|PF01314|PF02730|PTHR30038|PTHR30038:SF0|SM00790|SSF48310|SSF56228
ydhX|ydhX|AP_002291.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR017896|IPR017900	4Fe-4S ferredoxin, iron-sulphur binding, conserved site|4Fe-4S ferredoxin-type, iron-sulpur binding domain	GO:0051536	G3DSA:3.30.70.20|PF13247|PS00198|PS51379|PTHR11938|PTHR11938:SF10|SSF54862
ydhY|ydhY|AP_002294.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001450|IPR017896|IPR017900	4Fe-4S binding domain|4Fe-4S ferredoxin, iron-sulphur binding, conserved site|4Fe-4S ferredoxin-type, iron-sulpur binding domain	GO:0009055|GO:0051536	G3DSA:3.30.70.20|PF00037|PF12798|PF12800|PS00198|PS51379|PTHR11938|PTHR11938:SF21|SSF54862
ydhZ|ydhZ|AP_002295.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR024493	Protein of unknown function DUF2767		PD968187|PF10965
ydiA|ydiA|AP_002323.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR005177	Bifunctional kinase-pyrophosphorylase	GO:0005524|GO:0016772	PF03618|PTHR30594|PTHR30594:SF0
ydiB|ydiB|AP_002312.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR006151|IPR013708|IPR016040|IPR022872|IPR022893	NAD(P)-binding domain|Quinate/Shikimate dehydrogenase|Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase|Shikimate dehydrogenase substrate binding, N-terminal|Shikimate, quinate/shikimate dehydrogenase	GO:0004764|GO:0030266|GO:0052733|GO:0052734|GO:0055114	G3DSA:3.40.192.10|G3DSA:3.40.50.720|MF_00222|MF_01578|PF01488|PF08501|PTHR21089|PTHR21089:SF0|SSF51735|SSF53223
ydiD|ydiD|AP_002321.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000873|IPR020845|IPR025110	AMP-binding, conserved site|AMP-dependent synthetase/ligase|Domain of unknown function DUF4009	GO:0003824|GO:0008152	G3DSA:2.30.38.10|G3DSA:3.30.300.30|G3DSA:3.40.50.980|PF00501|PF13193|PS00455|PTHR24095|SSF56801
ydiE|ydiE|AP_002325.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR019600	Hemin uptake protein HemP		G3DSA:2.10.70.10|PF10636
ydiF|ydiF|AP_002314.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004165|IPR014388	3-oxoacid CoA-transferase|Coenzyme A transferase family I	GO:0008152|GO:0008410|GO:0046952	G3DSA:3.40.1080.10|G3DSA:3.40.810.20|PF01144|PIRSF000858|PTHR13707|PTHR13707:SF15|SM00882|SSF100950
ydiI|ydiI|AP_002306.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003736|IPR006683	Phenylacetic acid degradation-related domain|Thioesterase superfamily		G3DSA:3.10.129.10|PF03061|PTHR12418|SSF54637|TIGR00369
ydiJ|ydiJ|AP_002307.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004113|IPR006094|IPR009051|IPR012285|IPR016164|IPR016166|IPR016167|IPR016169|IPR017896|IPR017900	4Fe-4S ferredoxin, iron-sulphur binding, conserved site|4Fe-4S ferredoxin-type, iron-sulpur binding domain|Alpha-helical ferredoxin|CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2|FAD linked oxidase, N-terminal|FAD-binding, type 2|FAD-binding, type 2, subdomain 1|FAD-linked oxidase, C-terminal|FAD-linked oxidase-like, C-terminal|Fumarate reductase, C-terminal	GO:0003824|GO:0008762|GO:0016491|GO:0016614|GO:0050660|GO:0051536|GO:0055114	G3DSA:1.10.1060.10|G3DSA:3.30.43.10|G3DSA:3.30.465.10|PF01565|PF02913|PF13183|PS00198|PS51379|PS51387|PTHR11748|PTHR11748:SF4|SSF46548|SSF55103|SSF56176
ydiK|ydiK|AP_002308.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002549	Uncharacterised protein family UPF0118		PF01594|PS51257|PTHR21716
ydiL|ydiL|AP_002309.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR010982|IPR015060	Lambda repressor-like, DNA-binding domain|Protein of unknown function DUF1870	GO:0003677	G3DSA:1.10.3100.10|PF08965|SSF47413
ydiM|ydiM|AP_002310.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR005829|IPR011701|IPR016196|IPR020846	Major facilitator superfamily|Major facilitator superfamily domain|Major facilitator superfamily domain, general substrate transporter|Sugar transporter, conserved site	GO:0005215|GO:0006810|GO:0016020|GO:0016021|GO:0055085	G3DSA:1.20.1250.20|PF07690|PS00216|PS50850|PTHR24003|PTHR24003:SF69|SSF103473
ydiN|ydiN|AP_002311.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR011701|IPR016196|IPR020846	Major facilitator superfamily|Major facilitator superfamily domain|Major facilitator superfamily domain, general substrate transporter	GO:0016021|GO:0055085	G3DSA:1.20.1250.20|PF07690|PS50850|PTHR24003|PTHR24003:SF69|SSF103473
ydiO|ydiO|AP_002315.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR006089|IPR006090|IPR006091|IPR006092|IPR009075|IPR009100|IPR013786	Acyl-CoA dehydrogenase, N-terminal|Acyl-CoA dehydrogenase, conserved site|Acyl-CoA dehydrogenase/oxidase|Acyl-CoA dehydrogenase/oxidase C-terminal|Acyl-CoA dehydrogenase/oxidase, N-terminal|Acyl-CoA oxidase/dehydrogenase, central domain|Acyl-CoA oxidase/dehydrogenase, type 1	GO:0003995|GO:0008152|GO:0016627|GO:0050660|GO:0055114	G3DSA:1.10.540.10|G3DSA:1.20.140.10|G3DSA:2.40.110.10|PF00441|PF02770|PF02771|PS00072|PS00073|PTHR10909|PTHR10909:SF145|SSF47203|SSF56645
ydiP|ydiP|AP_002316.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003313|IPR009057|IPR011051|IPR014710|IPR018060	DNA binding HTH domain, AraC-type|Homeodomain-like|RmlC-like cupin domain|RmlC-like jelly roll fold|Transcription regulator HTH, AraC, arabinose-binding/dimerisation	GO:0003677|GO:0003700|GO:0006355|GO:0043565	G3DSA:1.10.10.60|G3DSA:2.60.120.10|PF02311|PF12833|PS01124|PTHR11019|SM00342|SSF46689|SSF51182
ydiQ|ydiQ|AP_002317.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000049|IPR012255|IPR014729|IPR014730	Electron transfer flavoprotein, alpha/beta-subunit, N-terminal|Electron transfer flavoprotein, beta subunit|Electron transfer flavoprotein, beta-subunit, conserved site|Rossmann-like alpha/beta/alpha sandwich fold	GO:0009055	G3DSA:3.40.50.620|PF01012|PIRSF000090|PS01065|PTHR21294|PTHR21294:SF0|SM00893|SSF52402
ydiR|ydiR|AP_002318.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001308|IPR014729|IPR014730|IPR014731|IPR018206	Electron transfer flavoprotein, alpha subunit|Electron transfer flavoprotein, alpha subunit, C-terminal|Electron transfer flavoprotein, alpha subunit, C-terminal, conserved site|Electron transfer flavoprotein, alpha/beta-subunit, N-terminal|Rossmann-like alpha/beta/alpha sandwich fold	GO:0009055|GO:0050660	G3DSA:3.40.50.1220|G3DSA:3.40.50.620|PF00766|PF01012|PIRSF000089|PS00696|PTHR10909|PTHR10909:SF170|SM00893|SSF52402|SSF52467
ydiS|ydiS|AP_002319.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003042|IPR006076	Aromatic-ring hydroxylase-like|FAD dependent oxidoreductase	GO:0008152|GO:0016491|GO:0055114	G3DSA:3.50.50.60|PF01266|PR00420|PTHR10617|PTHR10617:SF6|SSF51905|SSF54373
ydiT|ydiT|AP_002320.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR012206|IPR017900	4Fe-4S ferredoxin, iron-sulphur binding, conserved site|Ferredoxin-like, FixX	GO:0005506	G3DSA:3.30.70.20|PIRSF036548|PS00198|SSF54862
ydiU|ydiU|AP_002326.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003846	Uncharacterised protein family UPF0061		MF_00692|PF02696|PTHR32057|PTHR32057:SF8
ydiV|ydiV|AP_002327.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001633	Diguanylate phosphodiesterase, EAL domain		G3DSA:3.20.20.450|PF00563|SSF141868
ydiY|ydiY|AP_002341.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR007433	Protein of unknown function DUF481		PF04338
ydiZ|ydiZ|AP_002343.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR020499|IPR022597	Protein of unknown function DUF2622|Uncharacterised protein family YdiZ		PD066031|PF11080
ydjA|ydjA|AP_002384.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000415|IPR026021	Nitroreductase-like|Putative NAD(P)H nitroreductase YdjA-like	GO:0016491	G3DSA:3.40.109.10|PF00881|PIRSF000232|PTHR23026|PTHR23026:SF56|SSF55469
ydjE|ydjE|AP_002388.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR005828|IPR016196|IPR020846	General substrate transporter|Major facilitator superfamily domain|Major facilitator superfamily domain, general substrate transporter	GO:0016021|GO:0022857|GO:0055085	G3DSA:1.20.1250.20|PF00083|PS50850|PTHR24064|SSF103473
ydjF|ydjF|AP_002389.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001034|IPR011991|IPR014036|IPR018356	DeoR C-terminal sensor domain|HTH DeoR N-terminal domain|Transcription regulator, HTH DeoR-type, conserved site|Winged helix-turn-helix DNA-binding domain	GO:0003700|GO:0005622|GO:0006355	G3DSA:1.10.10.10|G3DSA:3.40.50.1360|PF00455|PF08220|PR00037|PS00894|PS51000|PTHR30363|PTHR30363:SF0|SM00420|SSF100950|SSF46785
ydjG|ydjG|AP_002390.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001395|IPR020471|IPR023210	Aldo/keto reductase|Aldo/keto reductase subgroup|NADP-dependent oxidoreductase domain	GO:0016491|GO:0055114	G3DSA:3.20.20.100|PF00248|PR00069|PTHR11732|PTHR11732:SF92|SSF51430
ydjH|ydjH|AP_002391.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002139|IPR002173|IPR011611	Carbohydrate kinase PfkB|Carbohydrate/puine kinase, PfkB, conserved site|Ribokinase	GO:0004747|GO:0006014|GO:0016773	G3DSA:3.40.1190.20|PF00294|PR00990|PS00583|PS00584|PTHR10584|PTHR10584:SF139|SSF53613
ydjI|ydjI|AP_002392.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000771|IPR013785	Aldolase-type TIM barrel|Ketose-bisphosphate aldolase, class-II	GO:0003824|GO:0005975|GO:0008270|GO:0016832	G3DSA:3.20.20.70|PF01116|PIRSF001359|PTHR30304|SSF51569|TIGR00167
ydjJ|ydjJ|AP_002393.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002085|IPR002328|IPR011032|IPR013149|IPR013154|IPR016040	Alcohol dehydrogenase GroES-like|Alcohol dehydrogenase superfamily, zinc-type|Alcohol dehydrogenase, C-terminal|Alcohol dehydrogenase, zinc-type, conserved site|GroES-like|NAD(P)-binding domain	GO:0008270|GO:0016491|GO:0055114	G3DSA:3.40.50.720|G3DSA:3.90.180.10|PF00107|PF08240|PS00059|PTHR11695|PTHR11695:SF38|SSF50129|SSF51735
ydjK|ydjK|AP_002394.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR011701|IPR016196|IPR020846	Major facilitator superfamily|Major facilitator superfamily domain|Major facilitator superfamily domain, general substrate transporter	GO:0016021|GO:0055085	G3DSA:1.20.1250.20|PF07690|PS50850|PTHR24064|SSF103473
ydjL|ydjL|AP_002395.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002085|IPR002328|IPR011032|IPR013149|IPR013154|IPR016040	Alcohol dehydrogenase GroES-like|Alcohol dehydrogenase superfamily, zinc-type|Alcohol dehydrogenase, C-terminal|Alcohol dehydrogenase, zinc-type, conserved site|GroES-like|NAD(P)-binding domain	GO:0008270|GO:0016491|GO:0055114	G3DSA:3.40.50.720|G3DSA:3.90.180.10|PF00107|PF08240|PS00059|PTHR11695|PTHR11695:SF269|SSF50129|SSF51735
ydjM|ydjM|AP_002347.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR007404|IPR016956	LexA regulated metal-dependent membrane hydrolase, predicted|Protein of unknown function DUF457		PF04307|PIRSF030780
ydjN|ydjN|AP_002348.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001991	Sodium:dicarboxylate symporter	GO:0006835|GO:0016020|GO:0017153	G3DSA:1.10.3860.10|PF00375|PR00173|PTHR11958|PTHR11958:SF5|SSF118215
ydjQ|ydjQ|AP_002360.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000305|IPR027299	GIY-YIG domain|GIY-YIG nuclease superfamily		PF01541|PS50164|PTHR30562|PTHR30562:SF1|SM00465|SSF82771
ydjR|ydjR|AP_002361.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR010282|IPR011051|IPR014710|IPR023482	RmlC-like cupin domain|RmlC-like jelly roll fold|Uncharacterised protein family HutD/Ves|Uncharacterised protein family Ves		G3DSA:2.60.120.10|MF_01591|PF05962|SSF51182
ydjX|ydjX|AP_002369.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR015414	SNARE associated Golgi protein		PF09335|PTHR12677
ydjY|ydjY|AP_002370.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR017896	4Fe-4S ferredoxin-type, iron-sulpur binding domain	GO:0051536	PS51379
ydjZ|ydjZ|AP_002371.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR015414	SNARE associated Golgi protein		PF09335|PTHR12677
yeaA|yeaA|AP_002397.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002579|IPR011057	Mss4-like|Peptide methionine sulphoxide reductase MrsB	GO:0033743|GO:0055114	G3DSA:2.170.150.20|MF_01400|PF01641|PTHR10173|PTHR10173:SF5|SSF51316|TIGR00357
yeaB|yeaB|AP_002432.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000059|IPR000086|IPR015797|IPR023735	NUDIX hydrolase domain|NUDIX hydrolase domain-like|NUDIX hydrolase, NudL, conserved site|Uncharacterised nudix hydrolase NudL	GO:0000287|GO:0009132|GO:0016787|GO:0016818|GO:0030145	G3DSA:3.90.79.10|MF_01592|PF00293|PS01293|PS51462|PTHR12992|PTHR12992:SF0|SSF55811
yeaC|yeaC|AP_002396.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR009749	Protein of unknown function DUF1315		PF07023
yeaD|yeaD|AP_002399.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR008183|IPR011013|IPR014718|IPR025532	Aldose 1-/Glucose-6-phosphate 1-epimerase|Galactose mutarotase-like domain|Glucose-6-phosphate 1-epimerase|Glycoside hydrolase-type carbohydrate-binding, subgroup	GO:0003824|GO:0005975|GO:0016853|GO:0030246	G3DSA:2.70.98.10|PF01263|PIRSF016020|PTHR11122|PTHR11122:SF9|SSF74650
yeaE|yeaE|AP_002400.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001395|IPR020471|IPR023210	Aldo/keto reductase|Aldo/keto reductase subgroup|NADP-dependent oxidoreductase domain	GO:0016491|GO:0055114	G3DSA:3.20.20.100|PF00248|PR00069|PTHR11732|PTHR11732:SF102|SSF51430
yeaG|yeaG|AP_002402.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR010650|IPR013153|IPR016230|IPR027417	P-loop containing nucleoside triphosphate hydrolase|PrkA AAA domain|PrkA C-terminal domain|Serine-protein kinase, PrkA	GO:0004672	G3DSA:3.40.50.300|PF06798|PF08298|PIRSF000549|PTHR30267|PTHR30267:SF0|SM00763|SSF52540
yeaH|yeaH|AP_002403.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR006698	Thermus phage phiYS40, Orf56		MF_01232|PF04285|PTHR30510
yeaI|yeaI|AP_002404.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000160|IPR001054	Adenylyl cyclase class-3/4/guanylyl cyclase|GGDEF domain	GO:0009190|GO:0016849|GO:0035556	G3DSA:3.30.70.270|PF00990|PS50887|SM00267|SSF55073|TIGR00254
yeaJ|yeaJ|AP_002405.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000160|IPR001054	Adenylyl cyclase class-3/4/guanylyl cyclase|GGDEF domain	GO:0009190|GO:0016849|GO:0035556	G3DSA:3.30.450.20|G3DSA:3.30.70.270|PF00990|PS50887|SM00267|SSF55073|TIGR00254
yeaK|yeaK|AP_002406.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR007214	YbaK/aminoacyl-tRNA synthetase-associated domain	GO:0002161	G3DSA:3.90.960.10|PF04073|SSF55826
yeaL|yeaL|AP_002408.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR007382	Uncharacterised protein family UPF0756, transmembrame		MF_01874|PD021096|PF04284
yeaM|yeaM|AP_002409.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003313|IPR009057|IPR011051|IPR014710|IPR018060|IPR018062	DNA binding HTH domain, AraC-type|HTH domain AraC-type, conserved site|Homeodomain-like|RmlC-like cupin domain|RmlC-like jelly roll fold|Transcription regulator HTH, AraC, arabinose-binding/dimerisation	GO:0003677|GO:0003700|GO:0005622|GO:0006355|GO:0043565	G3DSA:1.10.10.60|G3DSA:2.60.120.10|PF02311|PF12833|PS00041|PS01124|PTHR30010|PTHR30010:SF0|SM00342|SSF46689|SSF51182
yeaN|yeaN|AP_002410.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004747|IPR011701|IPR016196|IPR020846	Cyanate transport system protein|Major facilitator superfamily|Major facilitator superfamily domain|Major facilitator superfamily domain, general substrate transporter	GO:0016021|GO:0055085	G3DSA:1.20.1250.20|PF07690|PS50850|PTHR24003|PTHR24003:SF89|SSF103473|TIGR00896
yeaO|yeaO|AP_002411.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR007438	Protein of unknown function DUF488		PF04343
yeaP|yeaP|AP_002413.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000160|IPR001054|IPR003018	Adenylyl cyclase class-3/4/guanylyl cyclase|GAF domain|GGDEF domain	GO:0005515|GO:0009190|GO:0016849|GO:0035556	G3DSA:3.30.450.40|G3DSA:3.30.70.270|PF00990|PF13492|PS50887|SM00065|SM00267|SSF55073|SSF55781|TIGR00254
yeaQ|yeaQ|AP_002414.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR007341	Transglycosylase-associated protein	GO:0016021	PF04226
yeaR|yeaR|AP_002416.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR014510|IPR014710|IPR015392	Domain of unknown function DUF1971|RmlC-like jelly roll fold|Tellurite resistance predicted, YeaR		G3DSA:2.60.120.10|PF09313|PIRSF020632|SSF51197
yeaS|yeaS|AP_002417.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001123	Lysine-type exporter protein (LYSE/YGGA)	GO:0006865|GO:0016020	PF01810|PIRSF006324
yeaT|yeaT|AP_002418.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000847|IPR005119|IPR011991	LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain	GO:0003700|GO:0006355	G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PS50931|PTHR32459|PTHR32459:SF0|SSF46785|SSF53850
yeaU|yeaU|AP_002419.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001804|IPR011829|IPR019818|IPR024084	Isocitrate and isopropylmalate dehydrogenases family|Isocitrate/isopropylmalate dehydrogenase, conserved site|Isopropylmalate dehydrogenase-like domain|Tartrate dehydrogenase	GO:0000287|GO:0016616|GO:0051287|GO:0055114	G3DSA:3.40.718.10|PF00180|PS00470|PTHR11835|PTHR11835:SF1|SSF53659|TIGR02089
yeaV|yeaV|AP_002420.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000060|IPR018093	BCCT transporter family|BCCT transporter, conserved site	GO:0005215|GO:0006810|GO:0016020	PF02028|PS01303|PTHR30047|PTHR30047:SF0|TIGR00842
yeaW|yeaW|AP_002421.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001663|IPR015879|IPR015881|IPR017941	Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site|Aromatic-ring-hydroxylating dioxygenase, alpha subunit|Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain|Rieske [2Fe-2S] iron-sulphur domain	GO:0005506|GO:0006725|GO:0016491|GO:0016705|GO:0016708|GO:0019439|GO:0051537|GO:0055114	G3DSA:2.102.10.10|G3DSA:3.90.380.10|PF00355|PF00848|PR00090|PS00570|PS51296|PTHR21266|PTHR21266:SF2|SSF50022|SSF55961
yeaX|yeaX|AP_002422.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000951|IPR001041|IPR001433|IPR006058|IPR008333|IPR012675|IPR017927|IPR017938	2Fe-2S ferredoxin, iron-sulphur binding site|2Fe-2S ferredoxin-type domain|Beta-grasp domain|Ferredoxin reductase-type FAD-binding domain|Oxidoreductase FAD/NAD(P)-binding|Oxidoreductase, FAD-binding domain|Phthalate dioxygenase reductase|Riboflavin synthase-like beta-barrel	GO:0009055|GO:0016491|GO:0051536|GO:0051537|GO:0055114	G3DSA:2.40.30.10|G3DSA:3.10.20.30|G3DSA:3.40.50.80|PF00111|PF00175|PF00970|PR00409|PS00197|PS51085|PS51384|PTHR32148|PTHR32148:SF0|SSF52343|SSF54292|SSF63380
yeaY|yeaY|AP_002425.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004658	Outer membrane lipoprotein Slp	GO:0019867	PF03843|PIRSF004982|PS51257|TIGR00752
yeaZ|yeaZ|AP_002426.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000905|IPR022496	Gcp-like domain|tRNA threonylcarbamoyl adenosine modification protein YeaZ	GO:0070526	G3DSA:3.30.420.40|PF00814|PTHR11735|PTHR11735:SF8|SSF53067|TIGR03725
yebA|yebA|AP_002476.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002482|IPR011055|IPR013731|IPR016047|IPR018392	Duplicated hybrid motif|Opacity-associated protein A, N-terminal|Peptidase M23|Peptidoglycan-binding Lysin subgroup|Peptidoglycan-binding lysin domain	GO:0016998	G3DSA:2.70.70.10|G3DSA:3.10.350.10|PF01476|PF01551|PF08525|PTHR21666|PTHR21666:SF45|SM00257|SSF51261|SSF54106
yebB|yebB|AP_002482.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091				G3DSA:2.30.30.330|PF05708|SSF54001
yebC|yebC|AP_002484.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002876|IPR017856|IPR026563|IPR026564	Integrase, N-terminal zinc-binding domain-like|Transcriptional regulator TACO1-like|Transcriptional regulator TACO1-like, domain 2|Transcriptional regulator TACO1-like, domain 3		G3DSA:1.10.10.200|G3DSA:3.30.1270.10|G3DSA:3.30.70.980|MF_00693|PF01709|PTHR12532|PTHR12532:SF0|SSF75625|TIGR01033
yebE|yebE|AP_002466.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR007486	Protein of unknown function DUF533		G3DSA:1.10.3680.10|PF04391|SSF158682
yebF|yebF|AP_002467.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR020236|IPR025603	Uncharacterised protein family YebF|YebF/Colicin-M immunity protein		MF_01435|PD077599|PF13995|PS51257
yebG|yebG|AP_002468.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR009813	Uncharacterised protein family YebG		G3DSA:1.10.10.710|PF07130
yebK|yebK|AP_002473.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000281|IPR001347|IPR009057|IPR011991	Helix-turn-helix protein RpiR|Homeodomain-like|Sugar isomerase (SIS)|Winged helix-turn-helix DNA-binding domain	GO:0003677|GO:0003700|GO:0005975|GO:0006355|GO:0030246	G3DSA:1.10.10.10|G3DSA:3.40.50.10490|PF01380|PF01418|PS51071|PS51464|PTHR30514|SSF46689|SSF53697
yebN|yebN|AP_002440.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003810|IPR022929	Domain of unknown function DUF204|Putative manganese efflux pump MntP		MF_01521|PF02659
yebO|yebO|AP_002444.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR025594	YebO-like protein		PF13974
yebQ|yebQ|AP_002448.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001411|IPR011701|IPR016196|IPR020846	Major facilitator superfamily|Major facilitator superfamily domain|Major facilitator superfamily domain, general substrate transporter|Tetracycline resistance protein TetB/drug resistance transporter	GO:0016021|GO:0055085	G3DSA:1.20.1250.20|PF07690|PR01036|PS50850|PTHR24003|SSF103473
yebR|yebR|AP_002452.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000614|IPR003018	GAF domain|Uncharacterised protein family UPF0067, conserved site	GO:0005515	G3DSA:3.30.450.40|PF13185|PS01320|PTHR21021|SM00065|SSF55781
yebS|yebS|AP_002453.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR005219|IPR007498|IPR011031	Conserved hypothetical protein CHP00155|Multihaem cytochrome|Paraquat-inducible protein A		PF04403|PS51008|PTHR30462|PTHR30462:SF0|TIGR00155
yebT|yebT|AP_002454.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003399	Mammalian cell entry-related		PF02470|PTHR30462|PTHR30462:SF0
yebU|yebU|AP_002455.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001678|IPR011023|IPR018314|IPR023267|IPR023545	Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p|Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site|Nop2p|RNA (C5-cytosine) methyltransferase|rRNA small subunit methyltransferase F	GO:0003723|GO:0006364|GO:0008168|GO:0008649|GO:0008757	G3DSA:3.40.50.150|MF_01579|PF01189|PR02008|PS01153|PTHR22807|PTHR22807:SF20|SSF53335|TIGR00446
yebV|yebV|AP_002456.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR009950	Protein of unknown function DUF1480		PD060427|PF07351
yebW|yebW|AP_002457.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR009954	Protein of unknown function DUF1482		PF07358
yebY|yebY|AP_002459.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR019648	Protein of unknown function DUF2511		PF10709
yebZ|yebZ|AP_002460.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR008457	Copper resistance D	GO:0016021	PF05425
yecA|yecA|AP_002526.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004027|IPR011978	SEC-C motif|Uncharacterised protein family UPF0149		G3DSA:3.10.450.50|PF02810|PF03695|SSF101327|SSF103642|TIGR02292
yecC|yecC|AP_002532.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003439|IPR003593|IPR017871|IPR027417	AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase	GO:0000166|GO:0005524|GO:0016887|GO:0017111	G3DSA:3.40.50.300|PF00005|PS00211|PS50893|PTHR24220|PTHR24220:SF179|SM00382|SSF52540
yecD|yecD|AP_002487.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000868	Isochorismatase-like	GO:0003824|GO:0008152	G3DSA:3.40.50.850|PF00857|PTHR11080|PTHR11080:SF16|SSF52499
yecE|yecE|AP_002488.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002763	Protein of unknown function DUF72		G3DSA:3.20.20.410|PF01904|PTHR30348|PTHR30348:SF0|SSF117396
yecF|yecF|AP_002530.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR019705	Protein of unknown function DUF2594		PF10769
yecG|yecG|AP_002514.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR006015|IPR006016|IPR014729	Rossmann-like alpha/beta/alpha sandwich fold|Universal stress protein A|UspA	GO:0006950	G3DSA:3.40.50.620|PF00582|PIRSF006276|SSF52402
yecH|yecH|AP_002524.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR019620	Putative metal-binding protein		PF10678|TIGR03853
yecI|yecI|AP_002520.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001519|IPR008331|IPR009040|IPR009078|IPR012347	Ferritin|Ferritin- like diiron domain|Ferritin-like superfamily|Ferritin-related|Ferritin/DPS protein domain	GO:0006826|GO:0006879|GO:0008199|GO:0016491|GO:0046914|GO:0055114	G3DSA:1.20.1260.10|PF00210|PS50905|PTHR11431|PTHR11431:SF4|SSF47240
yecJ|yecJ|AP_002521.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR020262	Uncharacterised protein family YecJ		PD060536|PF10964
yecM|yecM|AP_002495.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR010393	Protein of unknown function DUF991		G3DSA:3.10.180.10|PF06185|SSF54593
yecN|yecN|AP_002489.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001129|IPR023352	Membrane associated eicosanoid/glutathione metabolism-like domain|Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein		G3DSA:1.20.120.550|PF01124|SSF161084
yecO|yecO|AP_002490.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR005271	tRNA (cmo5U34)-methyltransferase	GO:0002098|GO:0016300	G3DSA:3.40.50.150|MF_01589|PF12847|PIRSF006325|PTHR10108|PTHR10108:SF119|SSF53335|TIGR00740
yecP|yecP|AP_002491.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR010017|IPR027555	tRNA (mo5U34)-methyltransferase|tRNA (mo5U34)-methyltransferase-like	GO:0002098|GO:0016300	G3DSA:3.40.50.150|MF_01590|PF08003|PTHR10108|PTHR10108:SF159|SSF53335|TIGR00452
yecR|yecR|AP_002522.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR025731	YecR-like lipoprotein		PF13992|PS51257
yecS|yecS|AP_002533.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000515|IPR010065	Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family|Binding-protein-dependent transport systems inner membrane component	GO:0005215|GO:0006810|GO:0016020|GO:0016021	G3DSA:1.10.3720.10|PF00528|PS50928|PTHR30614|PTHR30614:SF0|SSF161098|TIGR01726
yecT|yecT|AP_002497.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR009739	Protein of unknown function DUF1311		PF07007
yedA|yedA|AP_002570.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000620|IPR004779	Carboxylate/Amino Acid/Amine Transporter|Drug/metabolite transporter	GO:0016020|GO:0016021	PF00892|PTHR32322|SSF103481|TIGR00950
yedD|yedD|AP_002543.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR025596	YedD-like protein		PF13987|PS51257
yedE|yedE|AP_002544.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR007272	Sulphur transport domain		PF04143|PTHR30574|PTHR30574:SF0
yedF|yedF|AP_002545.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001455	TusA-like domain		G3DSA:3.30.110.40|PF01206|PS01148|SSF64307
yedI|yedI|AP_002569.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR008526	Inner membrane protein YedI		PF05661|PIRSF016660|PTHR30503|PTHR30503:SF0
yedJ|yedJ|AP_002573.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003607|IPR006674	HD domain|HD/PDEase domain	GO:0003824|GO:0008081|GO:0046872	G3DSA:1.10.3210.10|PF01966|SM00471|SSF109604
yedK|yedK|AP_002546.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003738	Protein of unknown function DUF159		G3DSA:3.90.1680.10|PF02586|PTHR13604|PTHR13604:SF0|SSF143081
yedL|yedL|AP_002547.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000182|IPR016181	Acyl-CoA N-acyltransferase|GNAT domain	GO:0008080	G3DSA:3.40.630.30|PF00583|PS51186|PTHR23091|PTHR23091:SF36|SSF55729
yedM|yedM|AP_002548.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR020484	Uncharacterised protein family YedM		PD074737
yedO|yedO|AP_002534.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001926|IPR005966|IPR023702|IPR027278	1-aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase|D-cysteine desulfhydrase|D-cysteine desulphhydrase, bacterial|Tryptophan synthase beta subunit-like PLP-dependent enzymes superfamily	GO:0003824|GO:0019148	G3DSA:3.40.50.1100|MF_01045|PF00291|PIRSF006278|PTHR10314|PTHR10314:SF6|SSF53686|TIGR01275
yedP|yedP|AP_002566.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR006379|IPR006381|IPR012815|IPR023214	HAD-like domain|HAD-superfamily hydrolase, subfamily IIB|HAD-superfamily hydrolase, superfamily IIB, YedP|Mannosyl-3-phosphoglycerate phosphatase-related	GO:0003824|GO:0005737|GO:0008152|GO:0050531|GO:0051479	G3DSA:3.30.980.20|G3DSA:3.40.50.1000|MF_00617|PF08282|SSF56784|TIGR01484|TIGR01486|TIGR02463
yedQ|yedQ|AP_002567.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000160|IPR001054	Adenylyl cyclase class-3/4/guanylyl cyclase|GGDEF domain	GO:0009190|GO:0016849|GO:0035556	G3DSA:3.30.70.270|PF00990|PS50887|SM00267|SSF55073|TIGR00254
yedR|yedR|AP_002574.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091				
yedV|yedV|AP_002576.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003594|IPR003660|IPR003661|IPR004358|IPR005467|IPR006290|IPR009082	HAMP linker domain|Histidine kinase-like ATPase, ATP-binding domain|Signal transduction histidine kinase, core|Signal transduction histidine kinase, heavy metal sensor|Signal transduction histidine kinase, homodimeric domain|Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal	GO:0000155|GO:0000160|GO:0004673|GO:0004871|GO:0005524|GO:0007165|GO:0016020|GO:0016021|GO:0016310|GO:0016772	G3DSA:1.10.287.130|G3DSA:3.30.565.10|PF00512|PF00672|PF02518|PR00344|PS50109|PS50885|PTHR24423|PTHR24423:SF246|SM00387|SM00388|SSF47384|SSF55874|TIGR01386
yedW|yedW|AP_002577.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001789|IPR001867|IPR006291|IPR011006|IPR011991|IPR016032	CheY-like superfamily|Signal transduction response regulator, C-terminal|Signal transduction response regulator, C-terminal effector|Signal transduction response regulator, heavy metal response|Signal transduction response regulator, receiver domain|Winged helix-turn-helix DNA-binding domain	GO:0000156|GO:0000160|GO:0003677|GO:0006355	G3DSA:1.10.10.10|G3DSA:3.40.50.2300|PF00072|PF00486|PS50110|PTHR26402|PTHR26402:SF63|SM00448|SM00862|SSF46894|SSF52172|TIGR01387
yedX|yedX|AP_002578.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000895|IPR014306|IPR023416	Hydroxyisourate hydrolase|Transthyretin/hydroxyisourate hydrolase|Transthyretin/hydroxyisourate hydrolase, superfamily	GO:0006144|GO:0006810|GO:0033971	G3DSA:2.60.40.180|PF00576|PR00189|PTHR10395|PTHR10395:SF7|SM00095|SSF49472|TIGR02962
yedY|yedY|AP_002579.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000572|IPR006311|IPR022867	Oxidoreductase, molybdopterin-binding domain|Sulphoxide reductase catalytic subunit YedY|Twin-arginine translocation pathway, signal sequence	GO:0009055|GO:0016667|GO:0055114	G3DSA:3.90.420.10|MF_01206|PF00174|PS51318|PTHR19372|SSF56524
yedZ|yedZ|AP_002580.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR013130|IPR022837	Ferric reductase transmembrane component-like domain|Sulphoxide reductase heme-binding subunit YedZ		MF_01207|PF01794
yeeA|yeeA|AP_002608.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR006726	Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein	GO:0005886|GO:0006810	PF04632
yeeD|yeeD|AP_002612.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001455	TusA-like domain		G3DSA:3.30.110.40|PF01206|PS01148|SSF64307
yeeE|yeeE|AP_002613.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR007272	Sulphur transport domain		PF04143|PTHR30574|PTHR30574:SF0
yeeF|yeeF|AP_002614.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002293|IPR004841	Amino acid permease domain|Amino acid/polyamine transporter I	GO:0003333|GO:0006810|GO:0015171|GO:0016020|GO:0055085	PF00324|PIRSF006060|PTHR11785|PTHR11785:SF55
yeeI|yeeI|AP_002583.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR010384|IPR024079	Metallopeptidase, catalytic domain|Transcription factor MtfA	GO:0008237	G3DSA:3.40.390.10|MF_01593|PF06167|PTHR30164|PTHR30164:SF0|SSF55486
yeeJ|yeeJ|AP_002584.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003344|IPR003535|IPR008964|IPR016186|IPR022409|IPR024519	Bacterial Ig-like, group 1|C-type lectin-like|Domain of unknown function DUF3442, intimin/invasin|Intimin/invasin bacterial adhesion mediator protein|Invasin/intimin cell-adhesion|PKD/Chitinase domain	GO:0007155	G3DSA:2.60.40.1080|G3DSA:2.60.40.920|G3DSA:3.10.100.10|PF02369|PF11924|PR01369|PS51127|PTHR32093|SM00089|SM00634|SSF49373
yeeN|yeeN|AP_002587.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002876|IPR017856|IPR026562|IPR026563|IPR026564	Integrase, N-terminal zinc-binding domain-like|Probable transcriptional regulatory protein YeeN|Transcriptional regulator TACO1-like|Transcriptional regulator TACO1-like, domain 2|Transcriptional regulator TACO1-like, domain 3		G3DSA:1.10.10.200|G3DSA:3.30.1270.10|G3DSA:3.30.70.980|MF_00693|MF_00918|PF01709|PTHR12532|PTHR12532:SF0|SSF75625|TIGR01033
yeeO|yeeO|AP_002588.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002528	Multi antimicrobial extrusion protein	GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085	PF01554|PTHR11206|PTHR11206:SF7|TIGR00797
yeeR|yeeR|AP_002600.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091				
yeeS|yeeS|AP_002601.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001405|IPR020891|IPR025657	RadC protein|RadC-like JAB domain|Uncharacterised protein family UPF0758, conserved site		G3DSA:3.40.140.10|PF04002|PS01302|PTHR30471|PTHR30471:SF0|SSF102712|TIGR00608
yeeT|yeeT|AP_002602.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR009329	Protein of unknown function DUF987		PD056719|PF06174
yeeU|yeeU|AP_002603.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR009320	YagB/YeeU/YfjZ		G3DSA:3.30.450.20|PF06154|SSF143737
yeeV|yeeV|AP_002604.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR009610	Protein of unknown function DUF1219		PF06755
yeeX|yeeX|AP_002607.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR007458	Protein of unknown function DUF496		MF_00683|PD030876|PF04363|PIRSF028773
yeeY|yeeY|AP_002615.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000847|IPR005119|IPR011991	LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain	GO:0003700|GO:0006355	G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PS50931|PTHR30126|SSF46785|SSF53850
yeeZ|yeeZ|AP_002616.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR016040	NAD(P)-binding domain		G3DSA:3.40.50.720|PF13460|PTHR10366|PTHR10366:SF92|SSF51735
yefM|yefM|AP_002618.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR006442	Type II toxin-antitoxin system, antitoxin Phd/YefM		G3DSA:3.40.1620.10|PF02604|SSF143120|TIGR01552
yegD|yegD|AP_002669.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR013126|IPR018181	Heat shock protein 70 family|Heat shock protein 70, conserved site		G3DSA:3.30.420.40|PF00012|PS00329|PTHR19375|PTHR19375:SF126|SSF53067
yegE|yegE|AP_002667.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000014|IPR000160|IPR000700|IPR001054|IPR001610|IPR001633|IPR007895|IPR013655|IPR013656	Adenylyl cyclase class-3/4/guanylyl cyclase|Diguanylate phosphodiesterase, EAL domain|GGDEF domain|MASE1|PAC motif|PAS domain|PAS fold-3|PAS fold-4|PAS-associated, C-terminal	GO:0000155|GO:0000160|GO:0004871|GO:0005515|GO:0007165|GO:0009190|GO:0016849|GO:0035556	G3DSA:3.20.20.450|G3DSA:3.30.450.20|G3DSA:3.30.70.270|PF00563|PF00990|PF05231|PF08447|PF08448|PF13426|PS50112|PS50113|PS50883|PS50887|PTHR24423|PTHR24423:SF152|SM00052|SM00086|SM00091|SM00267|SSF141868|SSF55073|SSF55785|TIGR00229|TIGR00254
yegH|yegH|AP_002663.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000644|IPR005170|IPR005496|IPR016166|IPR016169	CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2|Cystathionine beta-synthase, core|FAD-binding, type 2|Integral membrane protein TerC|Transporter-associated domain	GO:0003824|GO:0005515|GO:0016021|GO:0016614|GO:0050660|GO:0055114	G3DSA:3.10.580.10|G3DSA:3.30.465.10|PF00571|PF03471|PF03741|PS51371|PTHR22777|PTHR22777:SF0|SM00116|SM01091|SSF54631|SSF56176
yegI|yegI|AP_002670.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000719|IPR003583|IPR011009|IPR016960	Helix-hairpin-helix DNA-binding motif, class 1|Protein kinase, catalytic domain|Protein kinase-like domain|Uncharacterised conserved protein UCP030823, kinase, HhH DNA-binding	GO:0003677|GO:0004672|GO:0005524|GO:0006281|GO:0006468|GO:0016772	G3DSA:1.10.150.20|G3DSA:1.10.510.10|PIRSF030823|PS50011|PTHR11584|PTHR11584:SF76|SM00278|SSF56112
yegJ|yegJ|AP_002671.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR018756	Domain of unknown function DUF2314		PF10077
yegK|yegK|AP_002672.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001932	Protein phosphatase 2C (PP2C)-like	GO:0003824	PF13672|SSF81606
yegL|yegL|AP_002673.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002035|IPR011392	Tellurite resistance, TerY|von Willebrand factor, type A	GO:0005515	G3DSA:3.40.50.410|PF00092|PIRSF020634|PS50234|SM00327|SSF53300
yegP|yegP|AP_002680.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR010879	Domain of unknown function DUF1508		G3DSA:3.30.160.160|PF07411|SSF160113
yegQ|yegQ|AP_002681.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001539	Peptidase U32	GO:0006508|GO:0008233	PF01136|PS01276|PTHR30217|PTHR30217:SF0
yegR|yegR|AP_002683.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091				PS51257
yegS|yegS|AP_002684.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001206|IPR005218|IPR016064|IPR022433|IPR022862	ATP-NAD kinase-like domain|Diacylglycerol kinase, catalytic domain|Diacylglycerol/lipid kinase|Lipid kinase YegS|Probable lipid kinase YegS	GO:0001727|GO:0003951|GO:0004143|GO:0007205|GO:0008152|GO:0016773|GO:0046872	MF_01377|PF00781|PS50146|PTHR12358|PTHR12358:SF4|SM00046|SSF111331|TIGR00147|TIGR03702
yegT|yegT|AP_002696.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004740|IPR016196|IPR020846	Major facilitator superfamily domain|Major facilitator superfamily domain, general substrate transporter|Nucleoside:H+ symporter	GO:0005337|GO:0015858|GO:0016021	G3DSA:1.20.1250.20|PF03825|PS50850|PTHR24003|PTHR24003:SF284|SSF103473|TIGR00889
yegU|yegU|AP_002697.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR005502	ADP-ribosylation/Crystallin J1		PF03747|PTHR16222|SSF101478
yegV|yegV|AP_002698.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002139|IPR002173|IPR011611	Carbohydrate kinase PfkB|Carbohydrate/puine kinase, PfkB, conserved site|Ribokinase	GO:0004747|GO:0006014|GO:0016773	G3DSA:3.40.1190.20|PF00294|PR00990|PS00583|PS00584|PTHR10584|PTHR10584:SF53|SSF53613
yegW|yegW|AP_002699.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000524|IPR011663|IPR011991	Transcription regulator HTH, GntR|UbiC transcription regulator-associated|Winged helix-turn-helix DNA-binding domain	GO:0003677|GO:0003700|GO:0005622|GO:0006355	G3DSA:1.10.10.10|G3DSA:3.40.1410.10|PF00392|PF07702|PR00035|PS50949|PTHR11751|PTHR11751:SF158|SM00345|SM00866|SSF46785|SSF64288
yegX|yegX|AP_002700.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002053|IPR008270|IPR013781|IPR017853|IPR018077	Glycoside hydrolase, catalytic domain|Glycoside hydrolase, family 25|Glycoside hydrolase, family 25 subgroup|Glycoside hydrolase, family 25, active site|Glycoside hydrolase, superfamily	GO:0003796|GO:0003824|GO:0005975|GO:0009253|GO:0016998	G3DSA:3.20.20.80|PF01183|PS00953|SM00641|SSF51445
yehA|yehA|AP_002706.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000259|IPR008966|IPR016959	Adhesion domain|Fimbrial-type adhesion domain|Uncharacterised conserved protein UCP030811	GO:0007155|GO:0009289	G3DSA:2.60.40.1090|PF00419|PIRSF030811|SSF49401
yehB|yehB|AP_002707.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000015|IPR018030|IPR025885|IPR025949	Fimbrial biogenesis outer membrane usher protein|Fimbrial membrane usher, conserved site|PapC N-terminal domain|PapC-like C-terminal domain	GO:0005215|GO:0005515|GO:0006810|GO:0016020	PF00577|PF13953|PF13954|PS01151|PTHR30451|PTHR30451:SF0|SSF141729
yehC|yehC|AP_002708.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001829|IPR008962|IPR016147|IPR016148|IPR018046	PapD-like|Pili assembly chaperone, C-terminal domain|Pili assembly chaperone, N-terminal, bacterial|Pili assembly chaperone, bacterial|Pili assembly chaperone, conserved site	GO:0030288|GO:0043711|GO:0071555	G3DSA:2.60.40.1070|G3DSA:2.60.40.360|PF00345|PF02753|PR00969|PS00635|PTHR30251|SSF49354|SSF49584
yehD|yehD|AP_002709.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000259|IPR008966	Adhesion domain|Fimbrial-type adhesion domain	GO:0007155|GO:0009289	G3DSA:2.60.40.1090|PF00419|SSF49401
yehE|yehE|AP_002710.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR020386	Uncharacterised protein family YehE		PD064930|PF10836
yehI|yehI|AP_002713.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR025406	Domain of unknown function DUF4132		PF13569
yehL|yehL|AP_002715.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003593|IPR011704|IPR027417	AAA+ ATPase domain|ATPase, dynein-related, AAA domain|P-loop containing nucleoside triphosphate hydrolase	GO:0000166|GO:0005524|GO:0016887|GO:0017111	G3DSA:3.40.50.300|PF07728|PTHR30144|SM00382|SSF52540
yehM|yehM|AP_002716.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091				PTHR30634|PTHR30634:SF0
yehP|yehP|AP_002717.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002035|IPR008912	Uncharacterised protein family CoxE-like|von Willebrand factor, type A	GO:0005515	G3DSA:3.40.50.410|PF05762|PTHR30634|PTHR30634:SF1|SM00327|SSF53300
yehQ|yehQ|AP_002718.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR007527	Zinc finger, SWIM-type	GO:0008270	PF04434|PS50966
yehR|yehR|AP_002719.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR009736	Bacteriophage VT1-Sakai, YehR		G3DSA:3.30.1830.10|PF06998|PIRSF006187|PS51257|SSF160704
yehS|yehS|AP_002720.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR009921	Domain of unknown function DUF1456		PF07308
yehT|yehT|AP_002721.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001789|IPR007492|IPR011006	CheY-like superfamily|LytTR DNA-binding domain|Signal transduction response regulator, receiver domain	GO:0000156|GO:0000160|GO:0003677|GO:0006355	G3DSA:2.20.25.10|G3DSA:2.40.50.40|G3DSA:3.40.50.2300|PF00072|PF04397|PS50110|PS50930|PTHR26402|SM00448|SM00850|SSF52172
yehU|yehU|AP_002722.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003018|IPR003594|IPR010559|IPR011620	GAF domain|Histidine kinase-like ATPase, ATP-binding domain|Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region|Signal transduction histidine kinase, internal region	GO:0000155|GO:0000160|GO:0004673|GO:0005515|GO:0005524|GO:0016021|GO:0071555	G3DSA:3.30.565.10|PF02518|PF06580|PF07694|PTHR10919|PTHR10919:SF32|SM00065|SM00387|SSF55781|SSF55874
yehW|yehW|AP_002725.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000515	Binding-protein-dependent transport systems inner membrane component	GO:0005215|GO:0006810|GO:0016020	G3DSA:1.10.3720.10|PF00528|PS50928|PTHR30177|PTHR30177:SF0|SSF161098
yehX|yehX|AP_002726.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003439|IPR003593|IPR017871|IPR027417	AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase	GO:0000166|GO:0005524|GO:0016887|GO:0017111	G3DSA:3.40.50.300|PF00005|PS00211|PS50893|PTHR24220|PTHR24220:SF125|SM00382|SSF52540|SSF54631
yehY|yehY|AP_002727.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000515	Binding-protein-dependent transport systems inner membrane component	GO:0005215|GO:0006810|GO:0016020	G3DSA:1.10.3720.10|PF00528|PS50928|PTHR30177|PTHR30177:SF0|SSF161098
yehZ|yehZ|AP_002728.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR007210	ABC-type glycine betaine transport system, substrate-binding domain	GO:0005215|GO:0006810	G3DSA:3.40.190.10|G3DSA:3.40.190.120|PF04069|SSF53850
yeiA|yeiA|AP_002744.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR005720|IPR012135|IPR013785|IPR017896|IPR017900	4Fe-4S ferredoxin, iron-sulphur binding, conserved site|4Fe-4S ferredoxin-type, iron-sulpur binding domain|Aldolase-type TIM barrel|Dihydroorotate dehydrogenase domain|Dihydroorotate dehydrogenase, class 1/ 2	GO:0003824|GO:0004152|GO:0004158|GO:0005737|GO:0006222|GO:0051536|GO:0055114	G3DSA:3.20.20.70|G3DSA:3.30.70.20|PF01180|PIRSF000164|PS00198|PS51379|PTHR11938|PTHR11938:SF16|SSF51395|SSF54862|TIGR01037
yeiB|yeiB|AP_002749.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR007349	Domain of unknown function DUF418		PF04235|PTHR30590
yeiC|yeiC|AP_002763.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002173|IPR011611	Carbohydrate kinase PfkB|Carbohydrate/puine kinase, PfkB, conserved site	GO:0016773	G3DSA:3.40.1190.20|PF00294|PS00583|PS00584|PTHR10584|PTHR10584:SF120|SSF53613
yeiE|yeiE|AP_002754.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000847|IPR005119|IPR011991	LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain	GO:0003700|GO:0006355	G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PR00039|PS50931|PTHR30126|SSF46785|SSF53850
yeiG|yeiG|AP_002751.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000801|IPR014186	Putative esterase|S-formylglutathione hydrolase	GO:0004091|GO:0018738|GO:0046294	G3DSA:3.40.50.1820|PF00756|PTHR10061|SSF53474|TIGR02821
yeiH|yeiH|AP_002755.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004630|IPR018383	Uncharacterised protein family UPF0324, bacteria|Uncharacterised protein family UPF0324, prokaryote	GO:0016021	PF03601|PTHR30106|PTHR30106:SF0|TIGR00698
yeiI|yeiI|AP_002757.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002173|IPR011611|IPR011991	Carbohydrate kinase PfkB|Carbohydrate/puine kinase, PfkB, conserved site|Winged helix-turn-helix DNA-binding domain	GO:0016773	G3DSA:1.10.10.10|G3DSA:3.40.1190.20|PF00294|PF13412|PS00583|PS00584|PTHR10584|PTHR10584:SF121|SSF46785|SSF53613
yeiJ|yeiJ|AP_002758.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002668|IPR008276|IPR011642|IPR011657|IPR018270	Concentrative nucleoside transporter|Concentrative nucleoside transporter, metazoan/bacterial|Na dependent nucleoside transporter|Na dependent nucleoside transporter, C-terminal|Nucleoside recognition Gate	GO:0001882|GO:0005415|GO:0006810|GO:0016020	PF01773|PF07662|PF07670|PTHR10590|TIGR00804
yeiL|yeiL|AP_002760.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000595|IPR014710|IPR018490	Cyclic nucleotide-binding domain|Cyclic nucleotide-binding-like|RmlC-like jelly roll fold		G3DSA:2.60.120.10|PF00027|SM00100|SSF51206
yeiM|yeiM|AP_002761.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002668|IPR008276|IPR011642|IPR011657|IPR018270	Concentrative nucleoside transporter|Concentrative nucleoside transporter, metazoan/bacterial|Na dependent nucleoside transporter|Na dependent nucleoside transporter, C-terminal|Nucleoside recognition Gate	GO:0001882|GO:0005415|GO:0006810|GO:0016020	PF01773|PF07662|PF07670|PTHR10590|TIGR00804
yeiN|yeiN|AP_002762.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR007342|IPR022830	Indigoidine synthase A-like|Pseudouridine-5'-phosphate glycosidase	GO:0016798	MF_01876|PF04227|PTHR10584|PTHR10584:SF1|SSF110581
yeiP|yeiP|AP_002769.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001059|IPR008991|IPR011897|IPR012340|IPR013185|IPR013852|IPR014722|IPR015365|IPR020599	Elongation factor P, C-terminal|Nucleic acid-binding, OB-fold|Ribosomal protein L2 domain 2|Translation elongation factor P-like, YeiP|Translation elongation factor P/YeiP|Translation elongation factor P/YeiP, central|Translation elongation factor P/YeiP, conserved site|Translation elongation factor, KOW-like|Translation protein SH3-like domain	GO:0003746|GO:0005737|GO:0006414|GO:0043043	G3DSA:2.30.30.30|G3DSA:2.40.50.140|MF_00646|PF01132|PF08207|PF09285|PIRSF005901|PS01275|PTHR30053|SM00841|SSF50104|SSF50249|TIGR02178
yeiQ|yeiQ|AP_002770.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000669|IPR008927|IPR013118|IPR013131|IPR013328|IPR016040	6-phosphogluconate dehydrogenase, C-terminal-like|Dehydrogenase, multihelical|Mannitol dehydrogenase|Mannitol dehydrogenase, C-terminal|Mannitol dehydrogenase, N-terminal|NAD(P)-binding domain	GO:0003824|GO:0008152|GO:0016491|GO:0016616|GO:0050662|GO:0055114	G3DSA:1.10.1040.10|G3DSA:3.40.50.720|PF01232|PF08125|PR00084|PTHR30562|PTHR30562:SF2|SSF48179|SSF51735
yeiR|yeiR|AP_002771.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003495|IPR011629|IPR027417	CobW/HypB/UreG domain|Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal|P-loop containing nucleoside triphosphate hydrolase		G3DSA:3.40.50.300|PF02492|PF07683|PTHR13748|PTHR13748:SF23|SM00833|SSF52540
yeiS|yeiS|AP_002742.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR020155	Uncharacterised protein family YeiS	GO:0016021	PD058881|PF10808
yeiT|yeiT|AP_002743.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001327|IPR009051|IPR012285|IPR016040|IPR023753	Alpha-helical ferredoxin|Fumarate reductase, C-terminal|NAD(P)-binding domain|Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain|Pyridine nucleotide-disulphide oxidoreductase, NAD-binding domain	GO:0016491|GO:0050660|GO:0051536|GO:0055114	G3DSA:1.10.1060.10|G3DSA:3.40.50.720|G3DSA:3.50.50.60|PF00070|PF07992|PR00419|PTHR11938|PTHR11938:SF46|SSF46548|SSF51971
yeiU|yeiU|AP_002772.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000326|IPR016118	Phosphatidic acid phosphatase type 2/haloperoxidase|Phosphatidic acid phosphatase/chloroperoxidase, N-terminal	GO:0003824|GO:0016020	G3DSA:1.20.144.10|PF01569|SM00014|SSF48317
yeiW|yeiW|AP_002768.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR005358	Uncharacterised protein family UPF0153		PF03692
yejA|yejA|AP_002775.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000914	Bacterial extracellular solute-binding protein, family 5	GO:0005215|GO:0006810	G3DSA:3.10.105.10|G3DSA:3.40.190.10|G3DSA:3.90.76.10|PF00496|PIRSF002741|PTHR30465|PTHR30465:SF4|SSF53850
yejB|yejB|AP_002776.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000515	Binding-protein-dependent transport systems inner membrane component	GO:0005215|GO:0006810|GO:0016020	G3DSA:1.10.3720.10|PF00528|PS50928|PTHR30465|PTHR30465:SF6|SSF161098
yejE|yejE|AP_002777.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000515	Binding-protein-dependent transport systems inner membrane component	GO:0005215|GO:0006810|GO:0016020	G3DSA:1.10.3720.10|PF00528|PS50928|PTHR30325|SSF161098
yejF|yejF|AP_002778.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003439|IPR003593|IPR013563|IPR027417	AAA+ ATPase domain|ABC transporter-like|Oligopeptide/dipeptide ABC transporter, C-terminal|P-loop containing nucleoside triphosphate hydrolase	GO:0000166|GO:0005524|GO:0015833|GO:0016887|GO:0017111	G3DSA:3.40.50.300|PF00005|PF08352|PTHR24220|PTHR24220:SF178|SM00382|SSF52540
yejG|yejG|AP_002779.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR020489	Uncharacterised protein family YejG		PD073777|PF13989
yejH|yejH|AP_002782.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001650|IPR006935|IPR011332|IPR014001|IPR027417	Helicase, C-terminal|Helicase, superfamily 1/2, ATP-binding domain|Helicase/UvrB domain|P-loop containing nucleoside triphosphate hydrolase|Ribosomal protein, zinc-binding domain	GO:0003676|GO:0003677|GO:0003735|GO:0004386|GO:0005524|GO:0005622|GO:0005840|GO:0006412|GO:0016787	G3DSA:3.40.50.300|PF00271|PF04851|PS51192|PS51194|PTHR24031|PTHR24031:SF124|SM00487|SM00490|SSF52540|SSF57829
yejK|yejK|AP_002784.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR007358	Nucleoid-associated protein NdpA	GO:0009295	MF_00730|PF04245|PTHR30334|PTHR30334:SF0
yejL|yejL|AP_002785.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR009857|IPR023202	Uncharacterised protein family UPF0352|YejL-like domain		G3DSA:1.10.3390.10|MF_00816|PD027794|PF07208|PIRSF006188|SSF158651
yejM|yejM|AP_002786.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000917|IPR012159|IPR017849|IPR017850|IPR024588	Alkaline phosphatase-like, alpha/beta/alpha|Alkaline-phosphatase-like, core domain|Membrane sulfatase, HI0842-related|Membrane sulfatase, HI0842-related, N-terminal domain|Sulfatase	GO:0003824|GO:0008152|GO:0008484	G3DSA:3.40.720.10|PF00884|PF11893|PIRSF004950|PTHR10342|PTHR10342:SF107|SSF53649
yejO|yejO|AP_002787.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003991|IPR004899|IPR005546|IPR006315|IPR011050|IPR012332	Autotransporter beta-domain|Outer membrane autotransporter barrel|P22 tailspike C-terminal domain-like|Pectin lyase fold/virulence factor|Pertactin virulence factor family|Pertactin, central region	GO:0007155|GO:0019867	G3DSA:2.160.20.20|G3DSA:2.40.128.130|PF03212|PF03797|PR01484|PS51208|PTHR12338|PTHR12338:SF3|SM00869|SSF103515|SSF51126|TIGR01414
yfaA|yfaA|AP_002827.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR018671	Protein of unknown function DUF2138		PF09909
yfaD|yfaD|AP_002841.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR006842|IPR010106	Conserved hypothetical protein CHP01784|Transposase (putative), YhgA-like		PF04754|TIGR01784
yfaE|yfaE|AP_002833.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001041|IPR006058|IPR012675	2Fe-2S ferredoxin, iron-sulphur binding site|2Fe-2S ferredoxin-type domain|Beta-grasp domain	GO:0009055|GO:0051536|GO:0051537	G3DSA:3.10.20.30|PF00111|PS00197|PS51085|SSF54292
yfaH|yfaH|AP_002835.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR020093	Uncharacterised domain YfaH, C-terminal		PD055259
yfaL|yfaL|AP_002830.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003368|IPR005546|IPR006315|IPR006626|IPR011050|IPR012332|IPR013425	Autotransporter beta-domain|Autotransporter-associated beta strand repeat|Outer membrane autotransporter barrel|P22 tailspike C-terminal domain-like|Parallel beta-helix repeat|Pectin lyase fold/virulence factor|Polymorphic outer membrane protein repeat	GO:0019867	G3DSA:2.160.20.20|G3DSA:2.40.128.130|PF02415|PF03797|PF12951|PS51208|PTHR12338|PTHR12338:SF3|SM00710|SM00869|SSF103515|SSF51126|TIGR01376|TIGR01414|TIGR02601
yfaO|yfaO|AP_002848.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000086|IPR015797|IPR020084|IPR020476|IPR023781	NUDIX hydrolase|NUDIX hydrolase domain|NUDIX hydrolase domain-like|NUDIX hydrolase, conserved site|Nucleoside triphosphatase NudI	GO:0016787|GO:0016818	G3DSA:3.90.79.10|MF_01846|PF00293|PR00502|PS00893|PS51462|PTHR22769|PTHR22769:SF0|SSF55811
yfaP|yfaP|AP_002824.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR012039|IPR019220	Domain of unknown function DUF2135|Uncharacterised conserved protein UCP012281		PF09906|PIRSF012281|PTHR30179
yfaQ|yfaQ|AP_002825.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR012338|IPR013693|IPR018748	Beta-lactamase/transpeptidase-like|Domain of unknown function DUF2300, secreted|Sporulation stage II protein D, amidase enhancer LytB N-terminal		PF08486|PF10062|SSF56601
yfaT|yfaT|AP_002826.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000064|IPR009558	Endopeptidase, NLPC/P60 domain|Protein of unknown function DUF1175		G3DSA:3.90.1720.10|PF06672
yfaU|yfaU|AP_002842.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR005000|IPR015813|IPR023593	2-keto-3-deoxy-L-rhamnonate aldolase|Aldehyde-lyase domain|Pyruvate/Phosphoenolpyruvate kinase-like domain	GO:0003824|GO:0006725|GO:0016830|GO:0016832	G3DSA:3.20.20.60|MF_01290|PF03328|PTHR30502|SSF51621
yfaV|yfaV|AP_002843.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR011701|IPR016196|IPR020846	Major facilitator superfamily|Major facilitator superfamily domain|Major facilitator superfamily domain, general substrate transporter	GO:0016021|GO:0055085	G3DSA:1.20.1250.20|PF07690|PS50850|PTHR11662|PTHR11662:SF3|SSF103473
yfaW|yfaW|AP_002844.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001354|IPR013341|IPR013342|IPR018110|IPR023444	L-rhamnonate dehydratase|Mandelate racemase/muconate lactonizing enzyme|Mandelate racemase/muconate lactonizing enzyme, C-terminal|Mandelate racemase/muconate lactonizing enzyme, N-terminal|Mandelate racemase/muconate lactonizing enzyme, conserved site	GO:0003824|GO:0008152|GO:0009063|GO:0050032	G3DSA:3.20.20.120|G3DSA:3.30.390.10|MF_01288|PF01188|PF02746|PF13378|PS00908|PTHR13794|PTHR13794:SF27|SM00922|SSF51604|SSF54826
yfaX|yfaX|AP_002845.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR005471|IPR011991|IPR014757	Transcription regulator IclR, C-terminal|Transcription regulator IclR, N-terminal|Winged helix-turn-helix DNA-binding domain	GO:0003677|GO:0006355	G3DSA:1.10.10.10|G3DSA:3.30.450.40|PF01614|PF09339|PS51077|PS51078|PTHR30136|PTHR30136:SF0|SM00346|SSF46785|SSF55781
yfaY|yfaY|AP_002846.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001453|IPR008135|IPR020817	Competence-induced protein CinA|Molybdenum cofactor synthesis|Molybdopterin binding domain	GO:0006777	G3DSA:3.40.980.10|MF_00226_B|PF00994|PIRSF006728|PTHR13939|SM00852|SSF142433|SSF53218|TIGR00177|TIGR00200
yfaZ|yfaZ|AP_002847.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR009998|IPR011250|IPR023614	Outer membrane protein/outer membrane enzyme PagP , beta-barrel|Porin domain|YfaZ	GO:0009279|GO:0016021	G3DSA:2.40.160.10|PF07437|SSF56925
yfbB|yfbB|AP_002861.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR022485	2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase	GO:0009234|GO:0070205	G3DSA:3.40.50.1820|MF_01660|PF12697|PTHR10992|PTHR10992:SF158|SSF53474|TIGR03695
yfbE|yfbE|AP_002850.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000653|IPR015421|IPR015422|IPR015424|IPR022850	DegT/DnrJ/EryC1/StrS aminotransferase|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2|UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase, ArnB	GO:0003824|GO:0008483|GO:0030170	G3DSA:3.40.640.10|G3DSA:3.90.1150.10|MF_01167|PF01041|PIRSF000390|PTHR11751|PTHR11751:SF119|SSF53383
yfbF|yfbF|AP_002851.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001173|IPR022857	Glycosyl transferase, family 2|Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase	GO:0016780	G3DSA:3.90.550.10|MF_01164|PF00535|PTHR10859|PTHR10859:SF49|SSF53448
yfbG|yfbG|AP_002852.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001509|IPR002376|IPR005793|IPR011034|IPR016040|IPR021168	Bifunctional polymyxin resistance protein, ArnA|Formyl transferase, C-terminal|Formyl transferase, C-terminal-like|Formyl transferase, N-terminal|NAD(P)-binding domain|NAD-dependent epimerase/dehydratase	GO:0003824|GO:0009058|GO:0016742|GO:0044237|GO:0050662|GO:0055114	G3DSA:3.10.25.10|G3DSA:3.40.50.170|G3DSA:3.40.50.720|G3DSA:3.90.25.10|PF00551|PF01370|PF02911|PIRSF036506|PTHR10366|PTHR10366:SF65|SSF50486|SSF51735|SSF53328
yfbH|yfbH|AP_002853.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002509|IPR011330	Glycoside hydrolase/deacetylase, beta/alpha-barrel|Polysaccharide deacetylase	GO:0003824|GO:0005975|GO:0016810	G3DSA:3.20.20.370|PF01522|PTHR30253|PTHR30253:SF0|SSF88713
yfbJ|yfbJ|AP_002856.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR022832	Probable 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF		MF_00538|SSF103481
yfbK|yfbK|AP_002868.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002035|IPR021908|IPR022156	Protein of unknown function DUF3520|Uncharacterised protein YfbK, N-terminal|von Willebrand factor, type A	GO:0005515	G3DSA:3.40.50.410|PF00092|PF12034|PF12450|PS50234|PS51257|PTHR10166|PTHR10166:SF24|SM00327|SSF53300
yfbL|yfbL|AP_002869.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR007484	Peptidase M28	GO:0006508|GO:0008233	G3DSA:3.40.630.10|PF04389|SSF53187
yfbM|yfbM|AP_002870.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR015068	Protein of unknown function DUF1877		G3DSA:3.40.1760.10|PF08974|SSF111069
yfbN|yfbN|AP_002871.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091				
yfbP|yfbP|AP_002873.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR011990	Tetratricopeptide-like helical	GO:0005515	G3DSA:1.25.40.10|PF13432|SSF48452
yfbQ|yfbQ|AP_002890.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004839|IPR015421|IPR015422|IPR015424	Aminotransferase, class I/classII|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2	GO:0003824|GO:0009058|GO:0030170	G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF00155|PTHR11751|PTHR11751:SF30|SSF53383
yfbR|yfbR|AP_002891.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003607|IPR006674|IPR022971	HD domain|HD/PDEase domain|dCMP phosphohydrolase	GO:0003824|GO:0008081|GO:0046872	G3DSA:1.10.3210.10|MF_01100|PD353566|PF01966|PTHR11845|SM00471|SSF109604
yfbS|yfbS|AP_002892.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001898|IPR004680|IPR006037	Citrate transporter-like domain|Regulator of K+ conductance, C-terminal|Sodium/sulphate symporter	GO:0005215|GO:0006813|GO:0006814|GO:0008324|GO:0016020|GO:0016021|GO:0055085	G3DSA:3.30.70.1450|PF02080|PF03600|PS01271|PS51202|PTHR10283|PTHR10283:SF12|SSF116726
yfbT|yfbT|AP_002893.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR005833|IPR006402|IPR006439|IPR023198|IPR023214	HAD-like domain|HAD-superfamily hydrolase, subfamily IA, variant 1|HAD-superfamily hydrolase, subfamily IA, variant 3|Haloacid dehalogenase/epoxide hydrolase|Phosphoglycolate phosphatase, domain 2	GO:0008152|GO:0008967|GO:0016787	G3DSA:1.10.150.240|G3DSA:3.40.50.1000|PF00702|PR00413|PTHR18901|SSF56784|TIGR01509|TIGR01549
yfbU|yfbU|AP_002894.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR005587|IPR023145|IPR023146	Uncharacterised protein family UPF0304, YfbU|YfbU, alpha-helical bundle domain|YfbU, helix-hairpin domain		G3DSA:1.10.287.680|G3DSA:1.10.3190.10|MF_00762|PD035118|PF03887|PIRSF006272|SSF116960
yfbV|yfbV|AP_002895.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR007334	Uncharacterised protein family UPF0208		MF_01101|PF04217
yfbW|yfbW|AP_002855.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000620|IPR022883	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase, subunit ArnE|Drug/metabolite transporter	GO:0016020	MF_01869|PF00892|SSF103481
yfcA|yfcA|AP_002927.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002781	Transmembrane protein TauE like	GO:0016021	PF01925|PTHR30269|PTHR30269:SF0
yfcC|yfcC|AP_002898.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR018385	C4-dicarboxylate anaerobic carrier-like	GO:0016021	PF03606|PTHR10283|PTHR10283:SF43
yfcD|yfcD|AP_002899.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000086|IPR015797|IPR024195	NUDIX hydrolase domain|NUDIX hydrolase domain-like|NUDIX hydrolase, YfcD, predicted	GO:0016787|GO:0016817	G3DSA:3.90.79.10|PF00293|PIRSF017340|PS51462|PTHR23422|PTHR23422:SF1|SSF55811
yfcE|yfcE|AP_002900.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000979|IPR004843|IPR020935	Metallophosphoesterase domain|Phosphodiesterase MJ0936|Phosphodiesterase YfcE, conserved site	GO:0016787|GO:0016788	G3DSA:3.60.21.10|PF00149|PS01269|PTHR11124|PTHR11124:SF2|SSF56300|TIGR00040
yfcF|yfcF|AP_002901.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004045|IPR010987|IPR012336|IPR017933	Glutathione S-transferase, C-terminal-like|Glutathione S-transferase, N-terminal|Glutathione S-transferase/chloride channel, C-terminal|Thioredoxin-like fold	GO:0005515	G3DSA:1.20.1050.10|G3DSA:3.40.30.10|PF13417|PS50404|PS50405|PTHR11260|PTHR11260:SF59|SSF47616|SSF52833
yfcG|yfcG|AP_002902.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004045|IPR004046|IPR010987|IPR012336|IPR017933	Glutathione S-transferase, C-terminal|Glutathione S-transferase, C-terminal-like|Glutathione S-transferase, N-terminal|Glutathione S-transferase/chloride channel, C-terminal|Thioredoxin-like fold	GO:0005515	G3DSA:1.20.1050.10|G3DSA:3.40.30.10|PF00043|PF13417|PS50404|PS50405|PTHR11260|PTHR11260:SF50|SSF47616|SSF52833
yfcH|yfcH|AP_002904.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001509|IPR010099|IPR013549|IPR016040	Domain of unknown function DUF1731, C-terminal|NAD(P)-binding domain|NAD-dependent epimerase/dehydratase|Sugar nucleotide epimerase YfcH,-like putative	GO:0003824|GO:0044237|GO:0050662	G3DSA:3.40.50.720|G3DSA:3.90.25.10|PF01370|PF08338|PTHR11092|SSF51735|TIGR01777
yfcI|yfcI|AP_002905.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR006842|IPR010106	Conserved hypothetical protein CHP01784|Transposase (putative), YhgA-like		PF04754|TIGR01784
yfcJ|yfcJ|AP_002922.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR011701|IPR016196|IPR020846|IPR023008	Major facilitator superfamily|Major facilitator superfamily domain|Major facilitator superfamily domain, general substrate transporter|Uncharacterised protein family UPF0226, major facilitator superfamily	GO:0016021|GO:0055085	G3DSA:1.20.1250.20|MF_01118|PF07690|PS50850|PTHR24003|SSF103473
yfcL|yfcL|AP_002925.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR014987	Uncharacterised protein family YfcL		PF08891
yfcM|yfcM|AP_002926.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR007411	Protein of unknown function DUF462		PF04315
yfcN|yfcN|AP_002931.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002625|IPR022990	Smr protein/MutS2 C-terminal|Uncharacterised protein family UPF0115		MF_01042|PF01713|PS50828|SM00463|SSF160443
yfcO|yfcO|AP_002932.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR021407	Protein of unknown function DUF2544		PF11245
yfcP|yfcP|AP_002933.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000259|IPR008966	Adhesion domain|Fimbrial-type adhesion domain	GO:0007155|GO:0009289	G3DSA:2.60.40.1090|PF00419|SSF49401
yfcQ|yfcQ|AP_002934.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000259|IPR008966	Adhesion domain|Fimbrial-type adhesion domain	GO:0007155|GO:0009289	G3DSA:2.60.40.1090|PF00419|SSF49401
yfcR|yfcR|AP_002935.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000259|IPR008966	Adhesion domain|Fimbrial-type adhesion domain	GO:0007155|GO:0009289	G3DSA:2.60.40.1090|PF00419|SSF49401
yfcS|yfcS|AP_002936.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001829|IPR008962|IPR016147|IPR016148|IPR018046	PapD-like|Pili assembly chaperone, C-terminal domain|Pili assembly chaperone, N-terminal, bacterial|Pili assembly chaperone, bacterial|Pili assembly chaperone, conserved site	GO:0030288|GO:0043711|GO:0071555	G3DSA:2.60.40.1070|G3DSA:2.60.40.360|PF00345|PF02753|PR00969|PS00635|PTHR30251|SSF49354|SSF49584
yfcT|yfcT|AP_002937.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000015|IPR025949	Fimbrial biogenesis outer membrane usher protein|PapC-like C-terminal domain	GO:0005215|GO:0006810|GO:0016020	PF00577|PF13953|PTHR30451|PTHR30451:SF0
yfcU|yfcU|AP_002938.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000015|IPR018030|IPR025885	Fimbrial biogenesis outer membrane usher protein|Fimbrial membrane usher, conserved site|PapC N-terminal domain	GO:0005215|GO:0005515|GO:0006810|GO:0016020	PF00577|PF13954|PS01151|PTHR30451|PTHR30451:SF0|SSF141729
yfcV|yfcV|AP_002939.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000259|IPR008966	Adhesion domain|Fimbrial-type adhesion domain	GO:0007155|GO:0009289	G3DSA:2.60.40.1090|PF00419|SSF49401
yfcX|yfcX|AP_002941.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001753|IPR006108|IPR006176|IPR006180|IPR008927|IPR012802|IPR013328|IPR016040	3-hydroxyacyl-CoA dehydrogenase, C-terminal|3-hydroxyacyl-CoA dehydrogenase, NAD binding|3-hydroxyacyl-CoA dehydrogenase, conserved site|6-phosphogluconate dehydrogenase, C-terminal-like|Crotonase superfamily|Dehydrogenase, multihelical|Fatty oxidation complex, alpha subunit FadJ|NAD(P)-binding domain	GO:0003824|GO:0003857|GO:0004300|GO:0006631|GO:0006635|GO:0008152|GO:0008692|GO:0016491|GO:0016616|GO:0050662|GO:0051287|GO:0055114	G3DSA:1.10.1040.10|G3DSA:3.40.50.720|G3DSA:3.90.226.10|MF_01617|PF00378|PF00725|PF02737|PS00067|PTHR23309|SSF48179|SSF51735|SSF52096|TIGR02440
yfcY|yfcY|AP_002942.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002155|IPR012806|IPR016038|IPR016039|IPR020610|IPR020613|IPR020615|IPR020616|IPR020617	Acetyl-CoA C-acyltransferase FadI|Thiolase|Thiolase, C-terminal|Thiolase, N-terminal|Thiolase, active site|Thiolase, acyl-enzyme intermediate active site|Thiolase, conserved site|Thiolase-like|Thiolase-like, subgroup	GO:0003824|GO:0005737|GO:0006631|GO:0008152|GO:0016042|GO:0016740|GO:0016746|GO:0016747	G3DSA:3.40.47.10|MF_01618|PF00108|PF02803|PIRSF000429|PS00098|PS00099|PS00737|PTHR18919|PTHR18919:SF5|SSF53901|TIGR01930|TIGR02446
yfcZ|yfcZ|AP_002943.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR005272	Conserved hypothetical protein CHP00743		G3DSA:3.30.70.860|PF04175|TIGR00743
yfdC|yfdC|AP_002947.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000292|IPR023271	Aquaporin-like|Formate/nitrite transporter	GO:0005215|GO:0006810|GO:0016020	G3DSA:1.20.1080.10|PF01226
yfdE|yfdE|AP_002971.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003673|IPR023606	CoA-transferase family III|CoA-transferase family III domain	GO:0003824|GO:0008152	G3DSA:3.30.1540.10|G3DSA:3.40.50.10540|PF02515|PTHR11837|SSF89796
yfdG|yfdG|AP_002949.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR007267|IPR016480	Glucose translocase, bactoprenol-linked|GtrA-like protein	GO:0000271|GO:0006810|GO:0016021	PF04138|PIRSF006298
yfdH|yfdH|AP_002950.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001173	Glycosyl transferase, family 2		G3DSA:3.90.550.10|PF00535|PTHR10859|PTHR10859:SF49|SSF53448
yfdI|yfdI|AP_002951.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091				PD141294
yfdK|yfdK|AP_002952.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003458	Bacteriophage T4, Gp38, tail fibre assembly		PF02413
yfdM|yfdM|AP_002954.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR008593	DNA N-6-adenine-methyltransferase	GO:0003677|GO:0009007|GO:0032775	PF05869|TIGR01712
yfdN|yfdN|AP_002955.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR020344|IPR024684	Bacteriophage SfV, Orf40|Transcriptional activator PerC/bacteriophage SfV Orf40		PD096295|PF06069
yfdQ|yfdQ|AP_002958.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR019276	Bacteriophage VT2phi272, P20		PF10065
yfdR|yfdR|AP_002959.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003607|IPR006674	HD domain|HD/PDEase domain	GO:0003824|GO:0008081|GO:0046872	G3DSA:1.10.3210.10|SM00471|SSF109604
yfdS|yfdS|AP_002960.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091				
yfdV|yfdV|AP_002972.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004776	Auxin efflux carrier	GO:0016021|GO:0055085	PF03547
yfdX|yfdX|AP_002975.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR021236	Uncharacterised protein family YfdX		PF10938
yfdY|yfdY|AP_002977.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR024470	Protein of unknown function DUF2545		PF10810
yfdZ|yfdZ|AP_002979.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004839|IPR015421|IPR015422|IPR015424	Aminotransferase, class I/classII|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2	GO:0003824|GO:0009058|GO:0030170	G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF00155|PTHR11751|PTHR11751:SF33|SSF53383
yfeA|yfeA|AP_002994.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000160|IPR001054|IPR001633|IPR007895	Adenylyl cyclase class-3/4/guanylyl cyclase|Diguanylate phosphodiesterase, EAL domain|GGDEF domain|MASE1	GO:0009190|GO:0016849|GO:0035556	G3DSA:3.20.20.450|PF00563|PF05231|PS50883|PS50887|PTHR30394|PTHR30394:SF0|SM00052|SM00267|SSF141868|SSF55073
yfeC|yfeC|AP_002995.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR009061|IPR010749|IPR011991	DNA binding domain, putative|Protein of unknown function DUF1323|Winged helix-turn-helix DNA-binding domain	GO:0000166	G3DSA:1.10.10.10|PD060594|PF07037|SSF46955
yfeD|yfeD|AP_002996.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR009061|IPR010749|IPR011991	DNA binding domain, putative|Protein of unknown function DUF1323|Winged helix-turn-helix DNA-binding domain	GO:0000166	G3DSA:1.10.10.10|PD060594|PF07037|SSF46955
yfeG|yfeG|AP_003031.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR009057|IPR018060|IPR018062	DNA binding HTH domain, AraC-type|HTH domain AraC-type, conserved site|Homeodomain-like	GO:0003677|GO:0003700|GO:0005622|GO:0006355|GO:0043565	G3DSA:1.10.10.60|PF00165|PS00041|PS01124|PTHR11019|PTHR11019:SF24|SM00342|SSF46689
yfeH|yfeH|AP_003003.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR016833	Putative sodium bile acid cotransporter		PF13593|PIRSF026166|PTHR18640|PTHR18640:SF6
yfeK|yfeK|AP_003013.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091				PD031420
yfeN|yfeN|AP_003001.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR018013	Nucleoside-specific channel-forming protein, Tsx-like	GO:0009279	PF03502|SSF111364
yfeO|yfeO|AP_002989.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001807|IPR014743|IPR022969	Chloride channel YfeO|Chloride channel, core|Chloride channel, voltage gated	GO:0005216|GO:0005247|GO:0006821|GO:0016020|GO:0055085	G3DSA:1.10.3080.10|MF_01115|PF00654|PR00762|SSF81340
yfeR|yfeR|AP_003002.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000847|IPR005119|IPR011991	LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain	GO:0003700|GO:0006355	G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PR00039|PS50931|PTHR30419|PTHR30419:SF0|SSF46785|SSF53850
yfeS|yfeS|AP_003014.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR008893|IPR016835	Uncharacterised conserved protein UCP026317, WGR|WGR domain		G3DSA:2.20.140.10|PF05406|PIRSF026317|PTHR30634|PTHR30634:SF0|SM00773|SSF142921
yfeT|yfeT|AP_003021.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000281|IPR001347|IPR009057|IPR011991|IPR022821	Helix-turn-helix protein RpiR|Homeodomain-like|Sugar isomerase (SIS)|Transcription regulator HTH, MurR|Winged helix-turn-helix DNA-binding domain	GO:0003677|GO:0003700|GO:0005975|GO:0006355|GO:0030246	G3DSA:1.10.10.10|G3DSA:3.40.50.10490|MF_02108|PF01380|PF01418|PS51071|PS51464|PTHR30514|SSF46689|SSF53697
yfeU|yfeU|AP_003022.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001347|IPR005486|IPR005488	Glucokinase regulatory, conserved site|N-acetylmuramic acid 6-phosphate etherase MurQ|Sugar isomerase (SIS)	GO:0005975|GO:0016835|GO:0030246|GO:0046348	G3DSA:3.40.50.10490|MF_00068|PF01380|PS01272|PS51464|PTHR10088|PTHR10088:SF2|SSF53697|TIGR00274
yfeW|yfeW|AP_003024.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001466|IPR012338|IPR022849	Beta-lactamase-related|Beta-lactamase/transpeptidase-like|Peptidase S12, UPF0214, YfeW-type		G3DSA:3.40.710.10|MF_01034|PF00144|PS51257|PTHR22935|PTHR22935:SF10|SSF56601
yfeX|yfeX|AP_003025.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR006314|IPR011008	Dimeric alpha-beta barrel|Dyp-type peroxidase	GO:0004601|GO:0020037|GO:0055114	PF04261|PS51404|PTHR30521|SSF54909|TIGR01413
yfeY|yfeY|AP_003026.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR010938	Protein of unknown function DUF1131		G3DSA:2.60.460.10|PD105195|PF06572|PS51257
yfeZ|yfeZ|AP_003027.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR021318	Protein of unknown function DUF2919		PF11143
yffB|yffB|AP_003056.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR006504|IPR006660|IPR012336	Arsenate reductase-like|Thioredoxin-like fold|Transcriptional regulator Spx/MgsR		G3DSA:3.40.30.10|PF03960|PS51353|SSF52833|TIGR01617
yffH|yffH|AP_003052.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000086|IPR004385|IPR015797	NUDIX hydrolase domain|NUDIX hydrolase domain-like|Nucleoside diphosphate pyrophosphatase	GO:0016787|GO:0016818|GO:0046872	G3DSA:3.90.79.10|PF00293|PS51462|PTHR11839|PTHR11839:SF1|SSF55811|TIGR00052
yffI|yffI|AP_003032.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000249|IPR011991|IPR020808	Bacterial microcompartments protein, conserved site|Microcompartment protein, bacteria|Winged helix-turn-helix DNA-binding domain		G3DSA:1.10.10.10|PD003442|PF00936|PS01139|SM00877|SSF143414
yfgA|yfgA|AP_003102.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001387|IPR010982|IPR023690|IPR025194	Cytoskeleton protein RodZ|Domain of unknown function DUF4115|Helix-turn-helix|Lambda repressor-like, DNA-binding domain	GO:0003677|GO:0008360|GO:0016021|GO:0043565	G3DSA:1.10.260.40|MF_02017|PF01381|PF13464|PS50943|SM00530|SSF47413
yfgB|yfgB|AP_003103.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004383|IPR006638|IPR007197|IPR013785|IPR027492	Aldolase-type TIM barrel|Dual-specificity RNA methyltransferase RlmN|Elongator protein 3/MiaB/NifB|Radical SAM|Ribosomal RNA large subunit methyltransferase RlmN/Cfr	GO:0003824|GO:0005737|GO:0006364|GO:0008173|GO:0030488|GO:0051536|GO:0070475	G3DSA:3.20.20.70|MF_01849|PF04055|PIRSF006004|PTHR30544|PTHR30544:SF0|SM00729|SSF102114|TIGR00048
yfgC|yfgC|AP_003080.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001915|IPR011990	Peptidase M48|Tetratricopeptide-like helical	GO:0004222|GO:0005515|GO:0006508|GO:0016020	G3DSA:1.25.40.10|G3DSA:3.30.2010.10|PF01435|PTHR22726|SSF48452
yfgD|yfgD|AP_003081.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR006659|IPR006660|IPR012336	Arsenate reductase|Arsenate reductase-like|Thioredoxin-like fold	GO:0008794|GO:0055114	G3DSA:3.40.30.10|PF03960|PS51353|PTHR30041|SSF52833|TIGR00014
yfgF|yfgF|AP_003089.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000160|IPR001633|IPR007895	Diguanylate phosphodiesterase, EAL domain|GGDEF domain|MASE1		G3DSA:3.20.20.450|PF00563|PF05231|PS50883|PTHR30394|PTHR30394:SF0|SM00052|SM00267|SSF141868
yfgG|yfgG|AP_003090.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR022576	Protein of unknown function DUF2633		PF11119
yfgH|yfgH|AP_003091.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR008816	Glycine zipper 2TM domain	GO:0019867	PF05433|PS51257
yfgI|yfgI|AP_003092.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR020231	Uncharacterised protein family, YfgI		PD095266
yfgJ|yfgJ|AP_003096.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR010807	Protein of unknown function DUF1407		G3DSA:2.10.290.10|PD060428|PF07191|SSF161187
yfgL|yfgL|AP_003098.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002372|IPR011047|IPR017687|IPR018391|IPR027295	Outer membrane protein assembly factor BamB|Pyrrolo-quinoline quinone beta-propeller repeat|Pyrrolo-quinoline quinone repeat|Quinonprotein alcohol dehydrogenase-like domain|Quinonprotein alcohol dehydrogenase-like superfamily		G3DSA:2.140.10.10|MF_00923|PF01011|PF13360|PS51257|SM00564|SSF50998|TIGR03300
yfgM|yfgM|AP_003099.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR011990|IPR018704|IPR026039	Tetratricopeptide-like helical|Uncharacterised domain UPF0070, N-terminal|Uncharacterised protein family UPF0070	GO:0005515	G3DSA:1.25.40.10|PF09976|PIRSF006170|SSF48452
yfgO|yfgO|AP_003079.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002549	Uncharacterised protein family UPF0118		PF01594|PTHR21716
yfhA|yfhA|AP_003140.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001789|IPR002078|IPR003593|IPR009057|IPR011006|IPR025662|IPR025943|IPR025944|IPR027417	AAA+ ATPase domain|CheY-like superfamily|Homeodomain-like|P-loop containing nucleoside triphosphate hydrolase|RNA polymerase sigma factor 54 interaction domain|Sigma-54 interaction domain, ATP-binding site 1|Sigma-54 interaction domain, ATP-binding site 2|Sigma-54 interaction domain, conserved site|Signal transduction response regulator, receiver domain	GO:0000156|GO:0000160|GO:0000166|GO:0003677|GO:0005524|GO:0006355|GO:0008134|GO:0017111	G3DSA:1.10.10.60|G3DSA:1.10.8.60|G3DSA:3.40.50.2300|G3DSA:3.40.50.300|PF00072|PF00158|PS00675|PS00676|PS00688|PS50045|PS50110|PTHR32071|SM00382|SM00448|SSF46689|SSF52172|SSF52540
yfhB|yfhB|AP_003146.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR006435|IPR023214	HAD-like domain|HAD-superfamily hydrolase, subfamily IF, YfhB		G3DSA:3.40.50.1000|PF12710|SSF56784|TIGR01545
yfhD|yfhD|AP_003144.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000189|IPR001638|IPR008258|IPR023346|IPR023703	Extracellular solute-binding protein, family 3|Lysozyme-like domain|Lytic transglycosylase-like, catalytic|Membrane-bound lytic murein transglycosylase F|Prokaryotic transglycosylase, active site	GO:0000270|GO:0005215|GO:0006810|GO:0008933|GO:0016020|GO:0016837|GO:0030288	G3DSA:1.10.530.10|G3DSA:3.40.190.10|MF_02016|PF00497|PF01464|PS00922|PTHR21666|PTHR21666:SF10|SM00062|SSF53850|SSF53955
yfhG|yfhG|AP_003141.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR025262	Quorum-sensing regulator protein G		PD117379|PF13942|PS51257
yfhH|yfhH|AP_003147.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000281|IPR001347|IPR009057|IPR011991	Helix-turn-helix protein RpiR|Homeodomain-like|Sugar isomerase (SIS)|Winged helix-turn-helix DNA-binding domain	GO:0003677|GO:0003700|GO:0005975|GO:0006355|GO:0030246	G3DSA:1.10.10.10|G3DSA:3.40.50.10490|PF01380|PF01418|PS51071|PS51464|PTHR30514|SSF46689|SSF53697
yfhJ|yfhJ|AP_003110.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR007479	ISC system FeS cluster assembly, IscX	GO:0016226	G3DSA:1.10.10.600|PF04384|PIRSF039003|SSF140319|TIGR03412
yfhK|yfhK|AP_003142.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003594|IPR003660|IPR003661|IPR004358|IPR005467|IPR009082	HAMP linker domain|Histidine kinase-like ATPase, ATP-binding domain|Signal transduction histidine kinase, core|Signal transduction histidine kinase, homodimeric domain|Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal	GO:0000155|GO:0004871|GO:0005524|GO:0007165|GO:0016020|GO:0016021|GO:0016310|GO:0016772	G3DSA:1.10.287.130|G3DSA:3.30.565.10|PF00512|PF00672|PF02518|PR00344|PS50109|PTHR24423|SM00387|SM00388|SSF47384|SSF55874
yfhL|yfhL|AP_003148.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001450|IPR017896|IPR017900	4Fe-4S binding domain|4Fe-4S ferredoxin, iron-sulphur binding, conserved site|4Fe-4S ferredoxin-type, iron-sulpur binding domain	GO:0009055|GO:0051536	G3DSA:3.30.70.20|PF00037|PS00198|PS51379|SSF54862
yfhM|yfhM|AP_003106.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001599|IPR002890|IPR008930|IPR011625|IPR021868|IPR026284	Alpha-2-macroglobulin|Alpha-2-macroglobulin MG1 domain|Alpha-2-macroglobulin domain protein, bacteria|Alpha-2-macroglobulin, N-terminal|Alpha-2-macroglobulin, N-terminal 2|Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid	GO:0004866	G3DSA:1.50.10.20|PF00207|PF01835|PF07703|PF11974|PIRSF038980|PS51257|PTHR11412|PTHR11412:SF64|SSF48239
yfhQ|yfhQ|AP_003118.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001537|IPR004384	RNA methyltransferase TrmH, group 1|tRNA/rRNA methyltransferase, SpoU	GO:0003723|GO:0006396|GO:0008173	G3DSA:3.40.1280.10|PF00588|PIRSF004808|PTHR12029|PTHR12029:SF32|SSF75217|TIGR00050
yfhR|yfhR|AP_003120.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091				G3DSA:3.40.50.1820|PF12695|PTHR12277|SSF53474
yfiA|yfiA|AP_003178.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003489	Ribosomal protein S30Ae/sigma 54 modulation protein	GO:0044238	G3DSA:3.30.160.100|PF02482|SSF69754|TIGR00741
yfiB|yfiB|AP_003186.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR006664|IPR006665	Outer membrane protein, OmpA/MotB, C-terminal|Outer membrane protein, bacterial	GO:0009279|GO:0016021	G3DSA:3.30.1330.60|PF00691|PR01021|SSF103088
yfiC|yfiC|AP_003161.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002052|IPR022882	DNA methylase, N-6 adenine-specific, conserved site|tRNA1(Val) (adenine(37)-N6)-methyltransferase	GO:0003676|GO:0008168|GO:0016430|GO:0032259	G3DSA:3.40.50.150|MF_01872|PF13659|PS00092|PTHR18895|PTHR18895:SF36|SSF53335
yfiD|yfiD|AP_003165.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001150|IPR011140|IPR019777	Autonomous glycyl radical cofactor GrcA|Formate C-acetyltransferase glycine radical, conserved site|Glycine radical domain	GO:0003824|GO:0008152	G3DSA:3.20.70.20|MF_00806|PF01228|PIRSF000378|PS00850|PS51149|PTHR30191|PTHR30191:SF0|SSF51998|TIGR04365
yfiE|yfiE|AP_003163.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000847|IPR005119|IPR011991	LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain	GO:0003700|GO:0006355	G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PS50931|PTHR30126|SSF46785|SSF53850
yfiF|yfiF|AP_003167.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001537|IPR013123|IPR016479	RNA 2-O ribose methyltransferase, substrate binding|tRNA/rRNA methyltransferase, SpoU|tRNA/rRNA methyltransferase, YfiF, predicted	GO:0003723|GO:0006396|GO:0008168|GO:0008173	G3DSA:3.30.1330.30|G3DSA:3.40.1280.10|PF00588|PF08032|PIRSF006280|PTHR12029|PTHR12029:SF30|SM00967|SSF55315|SSF75217
yfiH|yfiH|AP_003175.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003730|IPR011324	Cytotoxic necrotizing factor-like, catalytic|Multi-copper polyphenol oxidoreductase, laccase		G3DSA:3.60.140.10|PF02578|PTHR30616|SSF64438|TIGR00726
yfiK|yfiK|AP_003164.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001123	Lysine-type exporter protein (LYSE/YGGA)	GO:0006865|GO:0016020	PF01810
yfiL|yfiL|AP_003183.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR021242	Protein of unknown function DUF2799		PF10973|PS51257
yfiM|yfiM|AP_003172.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR017028|IPR018736	Protein of unknown function DUF2279, periplasmic lipoprotein|Uncharacterised conserved protein UCP034456		PF10043|PIRSF034456
yfiN|yfiN|AP_003185.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000160|IPR001054|IPR003660	Adenylyl cyclase class-3/4/guanylyl cyclase|GGDEF domain|HAMP linker domain	GO:0004871|GO:0007165|GO:0009190|GO:0016021|GO:0016849|GO:0035556	G3DSA:3.30.70.270|PF00990|PS50885|PS50887|PTHR10919|PTHR10919:SF356|SM00267|SSF55073|TIGR00254
yfiO|yfiO|AP_003177.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR011990|IPR017689	Outer membrane protein assembly factor BamD|Tetratricopeptide-like helical	GO:0005515	G3DSA:1.25.40.10|MF_00922|PF13525|PS51257|SSF48452|TIGR03302
yfiP|yfiP|AP_003169.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR005636	DTW		PF03942|PTHR21392
yfiQ|yfiQ|AP_003170.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000182|IPR003781|IPR011761|IPR013816|IPR016040|IPR016102|IPR016181	ATP-grasp fold|ATP-grasp fold, subdomain 2|Acyl-CoA N-acyltransferase|CoA-binding|GNAT domain|NAD(P)-binding domain|Succinyl-CoA synthetase-like	GO:0005524|GO:0008080|GO:0046872|GO:0048037	G3DSA:3.30.470.20|G3DSA:3.40.50.261|G3DSA:3.40.50.720|G3DSA:3.40.630.30|PF00583|PF13380|PF13549|PF13607|PS50975|PS51186|PTHR32383|PTHR32383:SF2|SM00881|SSF51735|SSF52210|SSF55729|SSF56059
yfiR|yfiR|AP_003184.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR025293	Protein of unknown function DUF4154		PF13689
yfjB|yfjB|AP_003195.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002504|IPR016064|IPR017437|IPR017438	ATP-NAD kinase, PpnK-type, all-beta|ATP-NAD kinase-like domain|Inorganic polyphosphate/ATP-NAD kinase, domain 1|Inorganic polyphosphate/ATP-NAD kinase, predicted	GO:0003951|GO:0006741|GO:0008152|GO:0019674	G3DSA:2.60.200.30|G3DSA:3.40.50.10330|MF_00361|PF01513|PTHR20275|PTHR20275:SF0|SSF111331
yfjD|yfjD|AP_003193.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000644|IPR002550|IPR005170|IPR016166|IPR016169	CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2|Cystathionine beta-synthase, core|Domain of unknown function DUF21|FAD-binding, type 2|Transporter-associated domain	GO:0003824|GO:0005515|GO:0016614|GO:0050660|GO:0055114	G3DSA:3.10.580.10|G3DSA:3.30.465.10|PF00571|PF01595|PF03471|PS51371|PTHR22777|PTHR22777:SF0|SM00116|SM01091|SSF54631|SSF56176
yfjF|yfjF|AP_003198.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR005346|IPR016155	Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp|RnfH protein		G3DSA:3.10.20.280|MF_00460|PF03658|SSF54285
yfjG|yfjG|AP_003199.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR005031|IPR023393	START-like domain|Streptomyces cyclase/dehydrase		G3DSA:3.30.530.20|PF03364|PTHR12901|PTHR12901:SF0|SSF55961
yfjI|yfjI|AP_003204.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR025048	Protein of unknown function DUF3987)		PF13148
yfjJ|yfjJ|AP_003205.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR021723	Inovirus Gp2		PF11726
yfjK|yfjK|AP_003206.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001650|IPR011545|IPR014001|IPR027417	DNA/RNA helicase, DEAD/DEAH box type, N-terminal|Helicase, C-terminal|Helicase, superfamily 1/2, ATP-binding domain|P-loop containing nucleoside triphosphate hydrolase	GO:0003676|GO:0004386|GO:0005524|GO:0008026	G3DSA:3.40.50.300|PF00270|PF00271|PS51192|PS51194|PTHR11752|PTHR11752:SF33|SM00487|SM00490|SSF52540
yfjL|yfjL|AP_003207.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR014976|IPR025382	Domain of unknown function DUF4297|Protein of unknown function DUF1837		PF08878|PF14130
yfjM|yfjM|AP_003208.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR011089	Domain of unknown function DUF1524		PD062361|PF07510
yfjP|yfjP|AP_003211.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR006073|IPR027417	GTP binding domain|P-loop containing nucleoside triphosphate hydrolase	GO:0005525	G3DSA:3.40.50.300|PF01926|PTHR11649|PTHR11649:SF42|SSF52540
yfjQ|yfjQ|AP_003212.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR026325	Protein of unknown function DUF932		PF06067|PTHR30066|PTHR30066:SF0
yfjR|yfjR|AP_003213.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001034|IPR011991|IPR026881	HTH DeoR N-terminal domain|WYL domain|Winged helix-turn-helix DNA-binding domain	GO:0003700|GO:0005622|GO:0006355	G3DSA:1.10.10.10|PF08220|PF13280
yfjS|yfjS|AP_003215.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091				PS51257
yfjT|yfjT|AP_003216.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091				PD034160
yfjU|yfjU|AP_003217.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR006660|IPR012336	Arsenate reductase-like|Thioredoxin-like fold		G3DSA:3.40.30.10|PF03960|PS51353|PTHR30041|SSF52833
yfjV|yfjV|AP_003219.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000802	Arsenite/antimonite efflux pump membrane protein,  ArsB	GO:0015105|GO:0015700|GO:0016021	PF02040|PR00758|PTHR10283|PTHR10283:SF21
yfjW|yfjW|AP_003220.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091				
yfjX|yfjX|AP_003221.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004914	Antirestriction protein		PD012854|PF03230|PTHR30066|PTHR30066:SF0
yfjY|yfjY|AP_003222.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001405|IPR020891|IPR025657	RadC protein|RadC-like JAB domain|Uncharacterised protein family UPF0758, conserved site		G3DSA:3.40.140.10|PF04002|PS01302|PTHR30471|PTHR30471:SF0|TIGR00608
yfjZ|yfjZ|AP_003224.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR009320	YagB/YeeU/YfjZ		G3DSA:3.30.450.20|PF06154|SSF143737
ygaC|ygaC|AP_003244.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR018994	Protein of unknown function DUF2002		PF09400|SSF159894
ygaD|ygaD|AP_003267.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR008136	CinA, C-terminal		G3DSA:3.90.950.20|PF02464|PTHR13939|SSF142433|TIGR00199
ygaF|ygaF|AP_003233.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR006076	FAD dependent oxidoreductase	GO:0016491|GO:0055114	G3DSA:3.30.9.10|G3DSA:3.50.50.60|PF01266|PTHR13847|PTHR13847:SF47|SSF51905
ygaH|ygaH|AP_003255.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR008407	Branched-chain amino acid transport, AzlD		PF05437
ygaM|ygaM|AP_003245.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR010279	Protein of unknown function DUF883, ElaB		PF05957
ygaP|ygaP|AP_003241.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001763|IPR021309	Protein of unknown function DUF2892|Rhodanese-like domain		G3DSA:3.40.250.10|PF00581|PF11127|PS50206|PTHR13253|SM00450|SSF52821
ygaR|ygaR|AP_003230.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR006047|IPR013781|IPR017853	Glycoside hydrolase, catalytic domain|Glycoside hydrolase, superfamily|Glycosyl hydrolase, family 13, catalytic domain	GO:0003824|GO:0005975|GO:0043169	G3DSA:3.20.20.80|PF00128|SSF51445
ygaT|ygaT|AP_003232.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR015038	Uncharacterised protein family CsiD	GO:0005506	G3DSA:3.60.130.10|MF_01083|PD135861|PF08943|SSF51197
ygaU|ygaU|AP_003238.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002482|IPR007055|IPR014004|IPR018392	BON domain|Peptidoglycan-binding Lysin subgroup|Peptidoglycan-binding lysin domain|Transport-associated and nodulation domain, bacteria	GO:0016998	G3DSA:3.10.350.10|PF01476|PF04972|PS50914|SM00257|SM00749|SSF54106
ygaV|ygaV|AP_003240.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001845|IPR011991	HTH ArsR-type DNA-binding domain|Winged helix-turn-helix DNA-binding domain	GO:0003700|GO:0005622|GO:0006355	G3DSA:1.10.10.10|PF01022|PR00778|PS50987|SM00418|SSF46785
ygaW|ygaW|AP_003243.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR010574	L-alanine exporter AlaE	GO:0016021|GO:0034639	MF_00914|PD090021|PF06610
ygaX|ygaX|AP_003253.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR016196|IPR020846	Major facilitator superfamily domain|Major facilitator superfamily domain, general substrate transporter		G3DSA:1.20.1250.20|PS50850|SSF103473
ygaZ|ygaZ|AP_003254.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR011606	Branched-chain amino acid transport, permease		PF03591
ygbA|ygbA|AP_003299.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR020483	Uncharacterised protein family YgbA		PD075772|PF11756
ygbE|ygbE|AP_003316.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR022721	Protein of unknown function DUF3561		PD070788|PF12084
ygbF|ygbF|AP_003321.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR010152	CRISPR-associated protein Cas2 subtype		PF09707|TIGR01873
ygbI|ygbI|AP_003302.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001034|IPR011991|IPR014036|IPR018356	DeoR C-terminal sensor domain|HTH DeoR N-terminal domain|Transcription regulator, HTH DeoR-type, conserved site|Winged helix-turn-helix DNA-binding domain	GO:0003700|GO:0005622|GO:0006355	G3DSA:1.10.10.10|G3DSA:3.40.50.1360|PF00455|PF08220|PR00037|PS00894|PS51000|PTHR30363|PTHR30363:SF0|SM00420|SSF100950|SSF46785
ygbJ|ygbJ|AP_003303.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002204|IPR006115|IPR008927|IPR013328|IPR015815|IPR016040	3-hydroxyisobutyrate dehydrogenase-related, conserved site|6-phosphogluconate dehydrogenase, C-terminal-like|6-phosphogluconate dehydrogenase, NADP-binding|Dehydrogenase, multihelical|Hydroxy monocarboxylic acid anion dehydrogenase, HIBADH-type|NAD(P)-binding domain	GO:0004616|GO:0006098|GO:0006573|GO:0008442|GO:0016491|GO:0016616|GO:0050662|GO:0055114	G3DSA:1.10.1040.10|G3DSA:3.40.50.720|PF03446|PIRSF000103|PS00895|PTHR22981|PTHR22981:SF27|SSF48179|SSF51735
ygbK|ygbK|AP_003304.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR010737	Protein of unknown function, DUF1537		PF07005|PTHR30304|SSF142764
ygbL|ygbL|AP_003305.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001303	Class II aldolase/adducin N-terminal	GO:0046872	G3DSA:3.40.225.10|PF00596|PTHR22789|SM01007|SSF53639
ygbM|ygbM|AP_003306.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR013022|IPR026040	Hydroxypyruvate isomerase-like|Xylose isomerase-like, TIM barrel domain		G3DSA:3.20.20.150|PF01261|PIRSF006241|PTHR12110|SSF51658
ygbN|ygbN|AP_003307.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003474	Gluconate transporter	GO:0015128|GO:0016020|GO:0035429	PF02447|PIRSF002746|PTHR30354|TIGR00791
ygbT|ygbT|AP_003322.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002729|IPR019851	CRISPR-associated protein Cas1|CRISPR-associated protein Cas1, ECOLI subtype		MF_01470|PF01867|TIGR00287|TIGR03638
ygcB|ygcB|AP_003328.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001650|IPR006474|IPR006483|IPR011545|IPR014001|IPR027417	CRISPR-associated  Cas3-HD domain|DNA/RNA helicase, DEAD/DEAH box type, N-terminal|Helicase Cas3, CRISPR-associated, core|Helicase, C-terminal|Helicase, superfamily 1/2, ATP-binding domain|P-loop containing nucleoside triphosphate hydrolase	GO:0003676|GO:0004386|GO:0005524|GO:0008026	G3DSA:3.40.50.300|PF00270|PS51192|PS51194|PS51643|PTHR24031|PTHR24031:SF49|SM00487|SM00490|SSF52540|TIGR01587|TIGR01596
ygcE|ygcE|AP_003342.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR018484|IPR018485	Carbohydrate kinase, FGGY, C-terminal|Carbohydrate kinase, FGGY, N-terminal	GO:0005975|GO:0016773	G3DSA:3.30.420.40|PF00370|PF02782|PTHR10196|PTHR10196:SF28|SSF53067
ygcF|ygcF|AP_003343.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR007197|IPR013785|IPR024924|IPR027609	7-carboxy-7-deazaguanine synthase-like|Aldolase-type TIM barrel|Putative 7-carboxy-7-deazaguanine synthase QueE, Proteobacteria|Radical SAM	GO:0003824|GO:0051536	G3DSA:3.20.20.70|MF_00917|PF04055|PF13394|PIRSF000370|SSF102114|TIGR04322
ygcG|ygcG|AP_003344.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR007621	TPM domain		PF04536|PTHR30373
ygcH|ygcH|AP_003323.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR010179	CRISPR-associated protein Cse3		G3DSA:3.30.70.1200|G3DSA:3.30.70.1210|PF08798|SM01101|SSF117987|TIGR01907
ygcI|ygcI|AP_003324.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR010147|IPR013422|IPR021124	CRISPR-associated protein Cas5, N-terminal|CRISPR-associated protein, Cas5|CRISPR-associated protein, CasD	GO:0003723|GO:0051607	PF09704|TIGR01868|TIGR02593
ygcJ|ygcJ|AP_003325.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR010148	CRISPR-associated protein, CT1975		PF09344|TIGR01869
ygcK|ygcK|AP_003326.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR013382	CRISPR-associated protein Cse2		PF09485|TIGR02548
ygcL|ygcL|AP_003327.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR013381	CRISPR-associated protein Cse1		PF09481|TIGR02547
ygcM|ygcM|AP_003332.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR007115	6-pyruvoyl tetrahydropterin synthase/QueD family protein		G3DSA:3.30.479.10|PF01242|PIRSF006113|PTHR12589|SSF55620|TIGR00039|TIGR03367
ygcN|ygcN|AP_003333.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003042|IPR006076	Aromatic-ring hydroxylase-like|FAD dependent oxidoreductase	GO:0008152|GO:0016491|GO:0055114	G3DSA:3.30.9.10|G3DSA:3.50.50.60|PF01266|PR00420|PTHR10617|PTHR10617:SF6|SSF51905|SSF54373
ygcO|ygcO|AP_003334.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR012206|IPR017896	4Fe-4S ferredoxin-type, iron-sulpur binding domain|Ferredoxin-like, FixX	GO:0005506|GO:0051536	G3DSA:3.30.70.20|PIRSF036548|PS51379|SSF54862
ygcP|ygcP|AP_003335.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR006699	Glycerol-3-phosphate responsive antiterminator	GO:0006355|GO:0009607	G3DSA:3.20.20.400|PF04309|PIRSF016897|SSF110391
ygcQ|ygcQ|AP_003336.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001308|IPR014729|IPR014730|IPR014731	Electron transfer flavoprotein, alpha subunit|Electron transfer flavoprotein, alpha subunit, C-terminal|Electron transfer flavoprotein, alpha/beta-subunit, N-terminal|Rossmann-like alpha/beta/alpha sandwich fold	GO:0009055|GO:0050660	G3DSA:3.40.50.1220|G3DSA:3.40.50.620|PF00766|PF01012|PIRSF000089|PTHR10909|PTHR10909:SF91|SSF52402|SSF52467
ygcR|ygcR|AP_003337.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR012255|IPR014729|IPR014730	Electron transfer flavoprotein, alpha/beta-subunit, N-terminal|Electron transfer flavoprotein, beta subunit|Rossmann-like alpha/beta/alpha sandwich fold	GO:0009055	G3DSA:3.40.50.620|PF01012|PIRSF000090|PTHR21294|PTHR21294:SF0|SM00893|SSF52402
ygcS|ygcS|AP_003338.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR005828|IPR005829|IPR016196|IPR020846	General substrate transporter|Major facilitator superfamily domain|Major facilitator superfamily domain, general substrate transporter|Sugar transporter, conserved site	GO:0005215|GO:0006810|GO:0016020|GO:0016021|GO:0022857|GO:0055085	G3DSA:1.20.1250.20|PF00083|PS00217|PS50850|PTHR24063|SSF103473
ygcU|ygcU|AP_003339.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004113|IPR006094|IPR016164|IPR016166|IPR016167|IPR016169	CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2|FAD linked oxidase, N-terminal|FAD-binding, type 2|FAD-binding, type 2, subdomain 1|FAD-linked oxidase, C-terminal|FAD-linked oxidase-like, C-terminal	GO:0003824|GO:0008762|GO:0016491|GO:0016614|GO:0050660|GO:0055114	G3DSA:3.30.43.10|G3DSA:3.30.465.10|PF01565|PF02913|PS51387|PTHR11748|PTHR11748:SF29|SSF55103|SSF56176
ygcW|ygcW|AP_003340.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002198|IPR002347|IPR016040	Glucose/ribitol dehydrogenase|NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR	GO:0008152|GO:0016491	G3DSA:3.40.50.720|PF00106|PR00080|PR00081|PTHR24316|PTHR24316:SF67|SSF51735
ygdB|ygdB|AP_003387.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR019652	Protein of unknown function DUF2509		PF10713
ygdD|ygdD|AP_003373.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR006696	Protein of unknown function DUF423		PF04241|PTHR10580|PTHR10580:SF12
ygdE|ygdE|AP_003372.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002877|IPR011224	Ribosomal RNA large subunit methyltransferase M|Ribosomal RNA methyltransferase FtsJ domain	GO:0008168|GO:0032259	G3DSA:3.40.50.150|MF_01551|PF01728|PIRSF028774|SSF53335
ygdH|ygdH|AP_003361.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR005269|IPR021826	Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG|Protein of unknown function DUF3412		G3DSA:3.30.1850.10|G3DSA:3.40.50.450|PF03641|PF11892|SSF102405
ygdI|ygdI|AP_003375.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR010305|IPR010920	Like-Sm (LSM) domain|Protein of unknown function DUF903		G3DSA:2.30.30.100|PF06004|PS51257|SSF50182
ygdK|ygdK|AP_003377.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003808|IPR017763	Cysteine desulfurase, sulphur acceptor subunit CsdE|Fe-S metabolism associated domain, SufE-like		G3DSA:3.90.1010.10|PF02657|SSF82649|TIGR03391
ygdL|ygdL|AP_003378.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000594|IPR009036|IPR016040	Molybdenum cofactor biosynthesis, MoeB|NAD(P)-binding domain|UBA/THIF-type NAD/FAD binding fold	GO:0003824	G3DSA:3.40.50.720|PF00899|PTHR10953|PTHR10953:SF8|SSF69572
ygdQ|ygdQ|AP_003395.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR005496	Integral membrane protein TerC	GO:0016021	PF03741|PTHR30060
ygdR|ygdR|AP_003396.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR010305|IPR010920	Like-Sm (LSM) domain|Protein of unknown function DUF903		G3DSA:2.30.30.100|PF06004|SSF50182
ygeA|ygeA|AP_003403.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001920|IPR004380|IPR015942|IPR018187	Asp/Glu racemase|Asp/Glu racemase, active site|Asp/Glu/hydantoin racemase|Aspartate racemase	GO:0006520|GO:0006807|GO:0008152|GO:0016855|GO:0036361	G3DSA:3.40.50.1860|PF01177|PS00923|PS00924|SSF53681|TIGR00035
ygeD|ygeD|AP_003398.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR011701|IPR016196|IPR023727	Lysophospholipid transporter LplT|Major facilitator superfamily|Major facilitator superfamily domain, general substrate transporter	GO:0005886|GO:0016021|GO:0051977|GO:0051978|GO:0055085	G3DSA:1.20.1250.20|MF_01585|PF07690|SSF103473
ygeG|ygeG|AP_003414.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR005415|IPR011716|IPR011990|IPR016379	Tetratricopeptide TPR-3|Tetratricopeptide-like helical|Type III secretion system, low calcium response, chaperone LcrH/SycD|Type III secretion system, low calcium response, chaperone LcrH/SycD, subgroup	GO:0005515|GO:0006950	G3DSA:1.25.40.10|PF07720|PIRSF003165|PR01595|SSF48452
ygeH|ygeH|AP_003415.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001867|IPR011990|IPR011991|IPR013026|IPR016032|IPR019734	Signal transduction response regulator, C-terminal|Signal transduction response regulator, C-terminal effector|Tetratricopeptide repeat|Tetratricopeptide repeat-containing domain|Tetratricopeptide-like helical|Winged helix-turn-helix DNA-binding domain	GO:0000156|GO:0000160|GO:0003677|GO:0005515|GO:0006355	G3DSA:1.10.10.10|G3DSA:1.25.40.10|PF00486|PS50005|PS50293|SM00862|SSF46894|SSF48452
ygeK|ygeK|AP_003417.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000792|IPR011006|IPR011991|IPR016032	CheY-like superfamily|Signal transduction response regulator, C-terminal effector|Transcription regulator LuxR, C-terminal|Winged helix-turn-helix DNA-binding domain	GO:0003677|GO:0003700|GO:0005622|GO:0006355|GO:0043565	G3DSA:1.10.10.10|G3DSA:3.40.50.2300|PF00196|PR00038|PS00622|PS50043|PTHR26402|PTHR26402:SF107|SM00421|SSF46894|SSF52172
ygeO|ygeO|AP_003420.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR013388	Type III secretion apparatus protein OrgA/MxiK	GO:0009405	PF09482|TIGR02555
ygeQ|ygeQ|AP_003424.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR008928|IPR012341	Six-hairpin glycosidase|Six-hairpin glycosidase-like	GO:0003824	G3DSA:1.50.10.10|PS51257|SSF48208
ygeR|ygeR|AP_003425.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002482|IPR011055|IPR016047|IPR018392	Duplicated hybrid motif|Peptidase M23|Peptidoglycan-binding Lysin subgroup|Peptidoglycan-binding lysin domain	GO:0016998	G3DSA:2.70.70.10|G3DSA:3.10.350.10|PF01476|PF01551|PS51257|PTHR21666|PTHR21666:SF45|SM00257|SSF51261
ygeV|ygeV|AP_003429.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000014|IPR002078|IPR002197|IPR003018|IPR003593|IPR009057|IPR025662|IPR025943|IPR025944|IPR027417	AAA+ ATPase domain|DNA binding HTH domain,  Fis-type|GAF domain|Homeodomain-like|P-loop containing nucleoside triphosphate hydrolase|PAS domain|RNA polymerase sigma factor 54 interaction domain|Sigma-54 interaction domain, ATP-binding site 1|Sigma-54 interaction domain, ATP-binding site 2|Sigma-54 interaction domain, conserved site	GO:0000166|GO:0003677|GO:0003700|GO:0004871|GO:0005515|GO:0005524|GO:0006355|GO:0007165|GO:0008134|GO:0017111	G3DSA:1.10.10.60|G3DSA:1.10.8.60|G3DSA:3.30.450.20|G3DSA:3.40.50.300|PF00158|PF02954|PF13188|PS00675|PS00676|PS00688|PS50045|PS50112|PTHR32071|PTHR32071:SF7|SM00065|SM00091|SM00382|SSF46689|SSF52540|SSF55785
ygeW|ygeW|AP_003430.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002082|IPR006130|IPR006131|IPR006132|IPR017702	Aspartate carbamoyltransferase|Aspartate/ornithine carbamoyltransferase|Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain|Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding|Putative carbamoyltransferase YgeW	GO:0004070|GO:0006207|GO:0006520|GO:0016597|GO:0016743	G3DSA:3.40.50.1370|PF00185|PF02729|PR00100|PR00101|PTHR11405|PTHR11405:SF1|SSF53671|TIGR03316
ygeX|ygeX|AP_003431.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001926|IPR010081|IPR019871	Diaminopropionate ammonia-lyase|Diaminopropionate ammonia-lyase, subgroup|Tryptophan synthase beta subunit-like PLP-dependent enzymes superfamily	GO:0008838|GO:0030170	G3DSA:3.40.50.1100|PF00291|PTHR10314|PTHR10314:SF7|SSF53686|TIGR01747|TIGR03528
ygeY|ygeY|AP_003432.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001261|IPR002933|IPR011650|IPR017706	ArgE/DapE/ACY1/CPG2/YscS, conserved site|Peptidase M20|Peptidase M20, dimerisation domain|Peptidase M20/DapE, YgeY	GO:0006508|GO:0008152|GO:0008237|GO:0016787	G3DSA:3.30.70.360|G3DSA:3.40.630.10|PF01546|PF07687|PS00758|PTHR11014|PTHR11014:SF39|SSF53187|SSF55031|TIGR03526
ygfA|ygfA|AP_003470.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002698|IPR024185	5-formyltetrahydrofolate cyclo-ligase|5-formyltetrahydrofolate cyclo-ligase-like domain	GO:0005524|GO:0009396|GO:0030272	G3DSA:3.40.50.10420|PF01812|PIRSF006806|PTHR23407|PTHR23407:SF1|SSF100950|TIGR02727
ygfB|ygfB|AP_003468.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR011978	Uncharacterised protein family UPF0149		MF_00346|PF03695|SSF101327|TIGR02292
ygfF|ygfF|AP_003461.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002198|IPR002347|IPR016040|IPR020904	Glucose/ribitol dehydrogenase|NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR|Short-chain dehydrogenase/reductase, conserved site	GO:0008152|GO:0016491	G3DSA:3.40.50.720|PF00106|PR00080|PR00081|PS00061|PTHR24322|SSF51735
ygfG|ygfG|AP_003477.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001753|IPR014748	Crontonase, C-terminal|Crotonase superfamily	GO:0003824|GO:0008152	G3DSA:1.10.12.10|G3DSA:3.90.226.10|PF00378|PTHR11941|SSF52096
ygfH|ygfH|AP_003478.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003702|IPR017821|IPR026888	Acetyl-CoA hydrolase/transferase|Acetyl-CoA hydrolase/transferase C-terminal domain|Succinate CoA transferase	GO:0003824|GO:0006084	G3DSA:3.40.1080.10|G3DSA:3.40.810.20|PF02550|PF13336|PTHR21432|PTHR21432:SF10|SSF100950|TIGR03458
ygfI|ygfI|AP_003479.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000847|IPR005119|IPR011991	LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain	GO:0003700|GO:0006355	G3DSA:1.10.10.10|PF00126|PF03466|PS50931|SSF46785|SSF53850
ygfJ|ygfJ|AP_003437.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR017696|IPR025877	MobA-like NTP transferase domain|Molybdenum hydroxylase accessory protein, YgfJ family		G3DSA:3.90.550.10|PF12804|SSF53448|TIGR03310
ygfK|ygfK|AP_003438.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR009051|IPR012285|IPR013785|IPR017701|IPR017896|IPR017900|IPR023753	4Fe-4S ferredoxin, iron-sulphur binding, conserved site|4Fe-4S ferredoxin-type, iron-sulpur binding domain|Aldolase-type TIM barrel|Alpha-helical ferredoxin|Fumarate reductase, C-terminal|Putative selenate reductase YgfK|Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain	GO:0003824|GO:0016491|GO:0051536|GO:0055114	G3DSA:1.10.1060.10|G3DSA:3.20.20.70|G3DSA:3.50.50.60|PF07992|PF13187|PR00419|PS00198|PS51379|PTHR11938|PTHR11938:SF17|SSF46548|SSF51395|SSF51971|TIGR03315
ygfM|ygfM|AP_003440.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002346|IPR005107|IPR016166|IPR016169|IPR017698	CO dehydrogenase flavoprotein, C-terminal|CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2|FAD-binding, type 2|Molybdopterin dehydrogenase, FAD-binding|Probable selenate reductase, FAD-binding subunit	GO:0003824|GO:0016491|GO:0016614|GO:0050660|GO:0055114	G3DSA:3.30.390.50|G3DSA:3.30.465.10|PF00941|PF03450|PS51387|PTHR11908|PTHR11908:SF20|SM01092|SSF55447|SSF56176|TIGR03312
ygfO|ygfO|AP_003442.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR006042|IPR006043	Xanthine/uracil permease|Xanthine/uracil/vitamin C permease	GO:0005215|GO:0006810|GO:0016020|GO:0055085	PF00860|PS01116|PTHR11119|PTHR11119:SF3|TIGR00801
ygfQ|ygfQ|AP_003444.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR006043	Xanthine/uracil/vitamin C permease	GO:0005215|GO:0006810|GO:0016020|GO:0055085	PF00860|PTHR11119|PTHR11119:SF9
ygfS|ygfS|AP_003445.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001450|IPR017896|IPR017900	4Fe-4S binding domain|4Fe-4S ferredoxin, iron-sulphur binding, conserved site|4Fe-4S ferredoxin-type, iron-sulpur binding domain	GO:0009055|GO:0051536	G3DSA:3.30.70.20|PF00037|PF12798|PF12800|PS00198|PS51379|PTHR11938|PTHR11938:SF10|SSF54862
ygfT|ygfT|AP_003446.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001327|IPR001450|IPR006006|IPR012285|IPR017896|IPR017900|IPR023753	4Fe-4S binding domain|4Fe-4S ferredoxin, iron-sulphur binding, conserved site|4Fe-4S ferredoxin-type, iron-sulpur binding domain|Fumarate reductase, C-terminal|Glutamate synthase, NADH/NADPH, small subunit 2|Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain|Pyridine nucleotide-disulphide oxidoreductase, NAD-binding domain	GO:0006537|GO:0009055|GO:0016491|GO:0016639|GO:0050660|GO:0051536|GO:0055114	G3DSA:1.10.1060.10|G3DSA:3.30.70.20|G3DSA:3.50.50.60|PF00037|PF00070|PF07992|PR00419|PS00198|PS51379|PTHR11938|PTHR11938:SF9|SSF51971|SSF54862|TIGR01318
ygfU|ygfU|AP_003447.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR006042|IPR006043|IPR017588	Xanthine permease|Xanthine/uracil permease|Xanthine/uracil/vitamin C permease	GO:0005215|GO:0006810|GO:0016020|GO:0016021|GO:0055085	PF00860|PS01116|PTHR11119|PTHR11119:SF3|TIGR00801|TIGR03173
ygfX|ygfX|AP_003455.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR009883	Protein of unknown function DUF1434		PF07254|PIRSF020653
ygfY|ygfY|AP_003456.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR005631	Protein of unknown function DUF339		G3DSA:1.10.150.250|PF03937|PTHR12469|SSF109910
ygfZ|ygfZ|AP_003457.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR006222|IPR017703|IPR023758	Glycine cleavage T-protein, N-terminal|YgfZ/GcvT conserved site|tRNA-modifying protein YgfZ	GO:0004047|GO:0005542|GO:0005737|GO:0006546|GO:0009451	G3DSA:3.30.70.1400|MF_01175|PF01571|PTHR22602|PTHR22602:SF0|SSF101790|SSF103025|TIGR03317
yggC|yggC|AP_003486.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR027417	P-loop containing nucleoside triphosphate hydrolase		G3DSA:3.40.50.300|PTHR10285|PTHR10285:SF40|SSF52540
yggD|yggD|AP_003487.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR007761	Mannitol repressor		G3DSA:1.20.120.330|PF05068|SSF158668
yggE|yggE|AP_003480.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR007497	Protein of unknown function DUF541		PF04402
yggF|yggF|AP_003488.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004464	Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase	GO:0006071|GO:0006094|GO:0042132	G3DSA:3.30.540.10|PF03320|PIRSF004532|PTHR30447|PTHR30447:SF0|SSF56655|TIGR00330
yggG|yggG|AP_003493.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001915	Peptidase M48	GO:0004222|GO:0006508|GO:0016020	G3DSA:3.30.2010.10|PF01435|PS51257|PTHR22726
yggH|yggH|AP_003517.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003358	tRNA (guanine-N-7) methyltransferase	GO:0006400|GO:0008176	G3DSA:3.40.50.150|MF_01057|PF02390|PTHR23417|SSF53335|TIGR00091
yggJ|yggJ|AP_003503.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR006700|IPR015947	PUA-like domain|Ribosomal RNA small subunit methyltransferase E	GO:0006364|GO:0008168	G3DSA:2.40.240.20|G3DSA:3.40.1280.10|PF04452|PIRSF015601|PTHR30027|SSF75217|SSF88697|TIGR00046
yggL|yggL|AP_003516.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR007416	Protein of unknown function DUF469		PF04320
yggM|yggM|AP_003513.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR009592	Protein of unknown function DUF1202		PF06717
yggN|yggN|AP_003515.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR021307	Protein of unknown function DUF2884		PF11101
yggP|yggP|AP_003489.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002085|IPR011032|IPR013149|IPR013154|IPR016040	Alcohol dehydrogenase GroES-like|Alcohol dehydrogenase superfamily, zinc-type|Alcohol dehydrogenase, C-terminal|GroES-like|NAD(P)-binding domain	GO:0008270|GO:0016491|GO:0055114	G3DSA:3.40.50.720|G3DSA:3.90.180.10|PF00107|PF08240|PTHR11695|PTHR11695:SF269|SSF50129|SSF51735
yggR|yggR|AP_003507.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001482|IPR003593|IPR006321|IPR027417	AAA+ ATPase domain|P-loop containing nucleoside triphosphate hydrolase|Pilus retraction protein PilT|Type II secretion system protein E	GO:0000166|GO:0005524|GO:0005622|GO:0006810|GO:0017111	G3DSA:3.40.50.300|PF00437|PS00662|PTHR30486|SM00382|SSF52540|TIGR01420
yggS|yggS|AP_003508.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001608|IPR011078	Alanine racemase, N-terminal|Uncharacterised protein family UPF0001		G3DSA:3.20.20.10|PF01168|PIRSF004848|PS01211|PTHR10146|SSF51419|TIGR00044
yggT|yggT|AP_003509.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003425	Uncharacterised protein family Ycf19	GO:0016020	PF02325
yggU|yggU|AP_003510.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003746|IPR005228	Conserved hypothetical protein CHP00251|Protein of unknown function DUF167		G3DSA:3.30.1200.10|MF_00634|PF02594|PTHR13420|SSF69786|TIGR00251
yggV|yggV|AP_003511.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002637|IPR020922	Ham1-like protein|Non-canonical purine NTP pyrophosphatase	GO:0009143|GO:0016787|GO:0017111	G3DSA:3.90.950.10|MF_01405|PF01725|PTHR11067|PTHR11067:SF1|SSF52972|TIGR00042
yggW|yggW|AP_003512.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004559|IPR006638|IPR007197|IPR010723|IPR023404	Coproporphyrinogen III oxidase, oxygen-independent related|Elongator protein 3/MiaB/NifB|HemN, C-terminal domain|Radical SAM|Radical SAM, alpha/beta horseshoe	GO:0003824|GO:0004109|GO:0005737|GO:0006779|GO:0051536|GO:0055114	G3DSA:3.80.30.20|PF04055|PF06969|PTHR13932|SM00729|SSF102114|TIGR00539
yggX|yggX|AP_003519.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR007457	Fe(II) trafficking protein YggX	GO:0005506	G3DSA:1.10.3880.10|MF_00686|PD029191|PF04362|PIRSF029827|SSF111148
yghA|yghA|AP_003556.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002198|IPR002347|IPR016040|IPR020904	Glucose/ribitol dehydrogenase|NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR|Short-chain dehydrogenase/reductase, conserved site	GO:0008152|GO:0016491	G3DSA:3.40.50.720|PF13561|PR00080|PR00081|PS00061|PTHR24322|SSF51735
yghB|yghB|AP_003560.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR015414	SNARE associated Golgi protein		PF09335|PTHR30353|PTHR30353:SF0
yghD|yghD|AP_003524.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR007690|IPR023229	Type II secretion system protein M, periplasmic domain|Type II secretion system, protein M	GO:0006858	G3DSA:3.30.1360.100|PF04612|PIRSF006291|SSF103054
yghF|yghF|AP_003525.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001478|IPR001639	PDZ domain|Type II secretion system protein C	GO:0005515|GO:0008565|GO:0015627|GO:0015628	G3DSA:2.30.42.10|PF11356|PS01141|SSF50156|TIGR01713
yghG|yghG|AP_003526.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR016502	Uncharacterised conserved protein UCP007010		PIRSF007010|PS51257
yghJ|yghJ|AP_003528.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR025385	Domain of unknown function DUF4092		PF13322|PF13402|PS51257|PTHR15730|PTHR15730:SF0
yghK|yghK|AP_003529.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003804	L-lactate permease	GO:0005887|GO:0015129|GO:0015727	PF02652|PTHR30003|PTHR30003:SF0|TIGR00795
yghO|yghO|AP_003536.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR016181	Acyl-CoA N-acyltransferase		G3DSA:3.40.630.30|SSF55729
yghQ|yghQ|AP_003538.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091				PF13440
yghR|yghR|AP_003539.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR027417	P-loop containing nucleoside triphosphate hydrolase		G3DSA:3.40.50.300|SSF52540
yghS|yghS|AP_003540.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR027417	P-loop containing nucleoside triphosphate hydrolase		G3DSA:3.40.50.300|SSF52540
yghT|yghT|AP_003541.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR027417	P-loop containing nucleoside triphosphate hydrolase		G3DSA:3.40.50.300|SSF52540
yghU|yghU|AP_003544.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004045|IPR010987|IPR012336|IPR017933	Glutathione S-transferase, C-terminal-like|Glutathione S-transferase, N-terminal|Glutathione S-transferase/chloride channel, C-terminal|Thioredoxin-like fold	GO:0005515	G3DSA:1.20.1050.10|G3DSA:3.40.30.10|PF13409|PF13410|PS50404|PS50405|PTHR11260|PTHR11260:SF50|SSF47616|SSF52833
yghW|yghW|AP_003553.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR022574	Protein of unknown function DUF2623		PD065638|PF11115
yghZ|yghZ|AP_003554.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001395|IPR005399|IPR023210	Aldo/keto reductase|NADP-dependent oxidoreductase domain|Potassium channel, voltage-dependent, beta subunit, KCNAB-related		G3DSA:3.20.20.100|PF00248|PTHR11732|PTHR11732:SF14|SSF51430
ygiB|ygiB|AP_003587.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR009576	Biofilm formation YgiB		PF06693
ygiC|ygiC|AP_003588.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR005494|IPR016185	Glutathionylspermidine synthase, pre-ATP-grasp-like domain|Pre-ATP-grasp domain		PF03738|PTHR30094|PTHR30094:SF0|SSF52440|SSF56059
ygiE|ygiE|AP_003590.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003689|IPR023498	Zinc transporter ZupT|Zinc/iron permease	GO:0016020|GO:0030001|GO:0046873|GO:0055085	MF_00548|PF02535|PTHR11065|PTHR11065:SF5
ygiF|ygiF|AP_003604.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR023577	CYTH-like domain		G3DSA:2.40.320.10|PD009560|PF01928|SSF55154
ygiH|ygiH|AP_003609.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003811	Glycerol-3-phosphate acyltransferase	GO:0005886	MF_01043|PF02660|PTHR30309|PTHR30309:SF0|TIGR00023
ygiL|ygiL|AP_003593.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000259|IPR008966	Adhesion domain|Fimbrial-type adhesion domain	GO:0007155|GO:0009289	G3DSA:2.60.40.1090|PF00419|SSF49401
ygiN|ygiN|AP_003579.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR007138|IPR011008	Antibiotic biosynthesis monooxygenase|Dimeric alpha-beta barrel		G3DSA:3.30.70.900|PF03992|SSF54909
ygiP|ygiP|AP_003610.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000847|IPR005119|IPR011991	LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain	GO:0003700|GO:0006355	G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PS50931|PTHR32459|PTHR32459:SF0|SSF46785|SSF53850
ygiQ|ygiQ|AP_003566.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR006638|IPR007197|IPR013704|IPR020612|IPR022946|IPR023404|IPR024560	Elongator protein 3/MiaB/NifB|Methylthiotransferase, conserved site|Radical SAM|Radical SAM, alpha/beta horseshoe|Uncharacterised protein family UPF0313|Uncharacterised protein family UPF0313, C-terminal|Uncharacterised protein family UPF0313, N-terminal	GO:0003824|GO:0051536|GO:0051539	G3DSA:3.80.30.20|MF_01251|PF04055|PF08497|PF11842|PS01278|PTHR32331|PTHR32331:SF0|SM00729|SSF102114|TIGR03904
ygiS|ygiS|AP_003570.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000914	Bacterial extracellular solute-binding protein, family 5	GO:0005215|GO:0006810	G3DSA:3.10.105.10|G3DSA:3.90.76.10|PF00496|PIRSF002741|PTHR30290|PTHR30290:SF0|SSF53850
ygiT|ygiT|AP_003571.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001387|IPR010982|IPR022452|IPR022453	Helix-turn-helix|Lambda repressor-like, DNA-binding domain|Zinc finger, YgiT-type|Zinc finger/helix-turn-helix protein, YgiT	GO:0003677|GO:0043565	G3DSA:1.10.260.40|PS50943|SM00530|SSF47413|TIGR03830|TIGR03831
ygiV|ygiV|AP_003573.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR010499|IPR011256	Bacterial transcription activator, effector binding|Regulatory factor, effector, bacterial		G3DSA:3.20.80.10|PF06445|SM00871|SSF55136
ygiW|ygiW|AP_003574.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR005220|IPR016052	Bacteriophage 933W, L0136|Viral OB-fold, YgiW		G3DSA:2.40.50.200|PF04076|SSF101756|TIGR00156
ygiZ|ygiZ|AP_003577.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091				PD072223
ygjD|ygjD|AP_003614.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000905|IPR017860|IPR017861|IPR022450	Gcp-like domain|Kae1/YgjD family|Peptidase M22, conserved site|Probable tRNA threonylcarbamoyladenosine biosynthesis protein Gcp (YgjD)	GO:0004222|GO:0070526	G3DSA:3.30.420.40|MF_01445|PF00814|PR00789|PS01016|PTHR11735|PTHR11735:SF6|SSF53067|TIGR00329|TIGR03723
ygjE|ygjE|AP_003613.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001898	Sodium/sulphate symporter	GO:0005215|GO:0006814|GO:0016020|GO:0055085	PF00939|PTHR10283|PTHR10283:SF13|TIGR00785
ygjF|ygjF|AP_003618.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR005122|IPR015637|IPR023502	DNA glycosylase, G/T mismatch|DNA glycosylase, G/T mismatch, bacterial|Uracil-DNA glycosylase-like	GO:0006281|GO:0016799	G3DSA:3.40.470.10|MF_01956|PF03167|PTHR12159|PTHR12159:SF7|SM00986|SM00987|SSF52141
ygjG|ygjG|AP_003622.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR005814|IPR015421|IPR015422|IPR015424|IPR017747	Aminotransferase class-III|Putrescine aminotransferase|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2	GO:0003824|GO:0008483|GO:0009447|GO:0030170|GO:0033094	G3DSA:3.40.640.10|G3DSA:3.90.1150.10|MF_01276|PF00202|PIRSF000521|PS00600|PTHR11986|PTHR11986:SF36|SSF53383|TIGR03372
ygjH|ygjH|AP_003623.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002547|IPR012340	Nucleic acid-binding, OB-fold|tRNA-binding domain	GO:0000049	G3DSA:2.40.50.140|PF01588|PS50886|PTHR11586|PTHR11586:SF1|SSF50249
ygjI|ygjI|AP_003627.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002293	Amino acid/polyamine transporter I	GO:0003333|GO:0015171|GO:0016020	PF13520|PIRSF006060|PTHR11785|PTHR11785:SF92
ygjJ|ygjJ|AP_003628.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091				
ygjK|ygjK|AP_003629.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001661|IPR008928	Glycoside hydrolase, family 37|Six-hairpin glycosidase-like	GO:0003824|GO:0004555|GO:0005991	PF01204|SSF48208
ygjM|ygjM|AP_003631.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001387|IPR010982	Helix-turn-helix|Lambda repressor-like, DNA-binding domain	GO:0003677|GO:0043565	G3DSA:1.10.260.40|PF01381|PS50943|SM00530|SSF47413
ygjN|ygjN|AP_003632.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR018669	Toxin-antitoxin system,  toxin component,  HigB, putative	GO:0016788	PF09907
ygjO|ygjO|AP_003633.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002052|IPR007848|IPR017237	DNA methylase, N-6 adenine-specific, conserved site|Methyltransferase small domain|rRNA (guanine-N2-)-methyltransferase, RsmD	GO:0003676|GO:0005737|GO:0008168|GO:0008990|GO:0031167|GO:0032259	G3DSA:3.40.50.150|MF_01859|PF05175|PIRSF037565|PS00092|PTHR18895|PTHR18895:SF6|SSF53335
ygjP|ygjP|AP_003634.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002725	Protein of unknown function DUF45		PF01863|PTHR30399|PTHR30399:SF0
ygjQ|ygjQ|AP_003635.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003848|IPR014729	Domain of unknown function DUF218|Rossmann-like alpha/beta/alpha sandwich fold		G3DSA:3.40.50.620|PF02698|PTHR30336|PTHR30336:SF0
ygjR|ygjR|AP_003636.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000683|IPR016040	NAD(P)-binding domain|Oxidoreductase, N-terminal	GO:0016491	G3DSA:3.30.360.10|G3DSA:3.40.50.720|PF01408|PTHR22604|PTHR22604:SF24|SSF51735|SSF55347
ygjV|ygjV|AP_003639.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR019629|IPR026267	Inner membrane protein YgjV|Uncharacterised protein family HI1736/YgjV		PF10688|PIRSF011443
yhaB|yhaB|AP_003668.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR016420	Uncharacterised conserved protein UCP004546		PIRSF004546
yhaC|yhaC|AP_003669.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091				SSF141571
yhaH|yhaH|AP_003652.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR008523	Lactobacillus phage LBR48, DUF805	GO:0016021	PF05656
yhaI|yhaI|AP_003653.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR008523	Lactobacillus phage LBR48, DUF805	GO:0016021	PF05656
yhaJ|yhaJ|AP_003654.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000847|IPR005119|IPR011991	LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain	GO:0003700|GO:0006355	G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PS50931|PTHR30126|SSF46785|SSF53850
yhaK|yhaK|AP_003655.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003829|IPR011051|IPR012093|IPR014710	Pirin|Pirin, N-terminal domain|RmlC-like cupin domain|RmlC-like jelly roll fold		G3DSA:2.60.120.10|PF02678|PIRSF006232|PTHR13903|SSF51182
yhaL|yhaL|AP_003656.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091				
yhaM|yhaM|AP_003657.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR005130|IPR021144	Serine dehydratase-like, alpha subunit|Uncharacterised protein family UPF0597		MF_01845|PF03313|PIRSF006054|PTHR30501
yhaO|yhaO|AP_003658.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091				
yhaV|yhaV|AP_003676.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR021679	Toxin endonuclease, YhaV		PF11663
yhbC|yhbC|AP_003715.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003728	Ribosome maturation factor RimP		G3DSA:2.30.30.180|G3DSA:3.30.300.70|MF_01077|PF02576|SSF74942|SSF75420
yhbE|yhbE|AP_003727.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000620	Drug/metabolite transporter	GO:0016020	PF00892|SSF103481
yhbG|yhbG|AP_003744.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003439|IPR003593|IPR017871|IPR027417	AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase	GO:0000166|GO:0005524|GO:0016887|GO:0017111	G3DSA:3.40.50.300|PF00005|PF12399|PS00211|PS50893|PTHR24220|PTHR24220:SF70|SM00382|SSF52540
yhbH|yhbH|AP_003746.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003489	Ribosomal protein S30Ae/sigma 54 modulation protein	GO:0044238	G3DSA:3.30.160.100|PF02482|SSF69754|TIGR00741
yhbJ|yhbJ|AP_003748.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR005337|IPR027417	ATPase, P-loop-containing|P-loop containing nucleoside triphosphate hydrolase	GO:0005524	G3DSA:3.40.50.300|MF_00636|PF03668|PIRSF005052|PTHR30448|PTHR30448:SF0|SSF52540
yhbN|yhbN|AP_003743.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR005653|IPR014340	Lipopolysaccharide assembly, LptA|Organic solvent tolerance-like, N-terminal	GO:0001530|GO:0015920|GO:0042597	G3DSA:2.60.450.10|PF03968|TIGR03002
yhbO|yhbO|AP_003698.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002818|IPR006286	Peptidase C56, PfpI|ThiJ/PfpI	GO:0016798	G3DSA:3.40.50.880|PF01965|PS51276|PTHR11019|PTHR11019:SF1|SSF52317|TIGR01382
yhbP|yhbP|AP_003699.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR011194|IPR012349	FMN-binding split barrel|Uncharacterised protein family UPF0306	GO:0010181|GO:0016491|GO:0055114	G3DSA:2.30.110.10|PIRSF009554|SSF50475
yhbQ|yhbQ|AP_003700.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000305|IPR022992|IPR027299	GIY-YIG domain|GIY-YIG nuclease superfamily|Uncharacterised protein family UPF0213, GIY-YIG endonuclease		MF_01029|PF01541|PS50164|SM00465|SSF82771
yhbS|yhbS|AP_003701.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000182|IPR016181	Acyl-CoA N-acyltransferase|GNAT domain	GO:0008080	G3DSA:3.40.630.30|PF00583|PS51186|PTHR23091|PTHR23091:SF53|SSF55729
yhbT|yhbT|AP_003702.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003033|IPR016830	SCP2 sterol-binding domain|Uncharacterised conserved protein UCP025550, lipid carrier protein, YhbT	GO:0032934	G3DSA:3.30.1050.10|PF02036|PIRSF025550|PTHR10094|PTHR10094:SF5|SSF55718
yhbU|yhbU|AP_003703.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001539|IPR022998	Peptidase U32|Thiamin phosphate synthase superfamily	GO:0006508|GO:0008233	PF01136|PS01276|PTHR30217|PTHR30217:SF0|SSF51391
yhbV|yhbV|AP_003704.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001539	Peptidase U32	GO:0006508|GO:0008233	PF01136|PTHR30264|PTHR30264:SF0
yhbW|yhbW|AP_003705.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR011251|IPR019949	Luciferase family oxidoreductase, group 1|Luciferase-like domain	GO:0016705|GO:0055114	G3DSA:3.20.20.30|PF00296|PTHR30137|SSF51679|TIGR03558
yhbX|yhbX|AP_003717.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000917|IPR017849|IPR017850	Alkaline phosphatase-like, alpha/beta/alpha|Alkaline-phosphatase-like, core domain|Sulfatase	GO:0003824|GO:0008152|GO:0008484	G3DSA:3.40.720.10|PF00884|PTHR30443|PTHR30443:SF0|SSF53649
yhbY|yhbY|AP_003723.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001890|IPR017924	RNA-binding protein YhbY|RNA-binding, CRM domain	GO:0003723	G3DSA:3.30.110.60|PD010559|PF01985|PS51295|SM01103|SSF75471|TIGR00253
yhcA|yhcA|AP_003758.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR008962|IPR016147|IPR016148	PapD-like|Pili assembly chaperone, C-terminal domain|Pili assembly chaperone, N-terminal, bacterial	GO:0030288|GO:0071555	G3DSA:2.60.40.1070|G3DSA:2.60.40.360|PF00345|PF02753|SSF49354|SSF49584
yhcB|yhcB|AP_003775.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR009386	Protein of unknown function DUF1043		PF06295|PIRSF006318
yhcC|yhcC|AP_003754.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR005911|IPR006638|IPR007197|IPR023404	Conserved hypothetical protein CHP01212|Elongator protein 3/MiaB/NifB|Radical SAM|Radical SAM, alpha/beta horseshoe	GO:0003824|GO:0051536	G3DSA:3.80.30.20|PF04055|PTHR11135|PTHR11135:SF0|SM00729|SSF102114|TIGR01212
yhcD|yhcD|AP_003759.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000015|IPR018030|IPR025885|IPR025949	Fimbrial biogenesis outer membrane usher protein|Fimbrial membrane usher, conserved site|PapC N-terminal domain|PapC-like C-terminal domain	GO:0005215|GO:0005515|GO:0006810|GO:0016020	PF00577|PF13953|PF13954|PS01151|PTHR30451|PTHR30451:SF0|SSF141729
yhcF|yhcF|AP_003761.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR010546	Protein of unknown function DUF1120		PF06551
yhcG|yhcG|AP_003762.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR009362	Protein of unknown function DUF1016		PF06250|PTHR30547|PTHR30547:SF0
yhcH|yhcH|AP_003763.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004375	Conserved hypothetical protein CHP00022		G3DSA:2.60.120.370|PF04074|SSF51197|TIGR00022
yhcM|yhcM|AP_003774.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR005654|IPR027417	ATPase, AFG1-like|P-loop containing nucleoside triphosphate hydrolase	GO:0005524	G3DSA:3.40.50.300|PF03969|PTHR12169|PTHR12169:SF0|SSF52540
yhcN|yhcN|AP_003780.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR010854|IPR025543	Dodecin-like|Domain of unknown function DUF1471		G3DSA:3.30.1660.10|PF07338|SSF159871
yhcO|yhcO|AP_003781.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000468	Barstar (barnase inhibitor)		G3DSA:3.30.370.10|PF01337|SSF52038
yhdA|yhdA|AP_003793.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000160|IPR001054|IPR001633	Adenylyl cyclase class-3/4/guanylyl cyclase|Diguanylate phosphodiesterase, EAL domain|GGDEF domain	GO:0009190|GO:0016849|GO:0035556	G3DSA:3.20.20.450|G3DSA:3.30.70.270|PF00563|PF00990|PS50883|PS50887|PS51257|SM00052|SM00267|SSF141868|SSF55073|TIGR00254
yhdE|yhdE|AP_003789.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003697	Maf-like protein	GO:0005737	G3DSA:3.90.950.10|MF_00528|PF02545|PIRSF006305|PTHR11746|SSF52972|TIGR00172
yhdH|yhdH|AP_003794.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002085|IPR011032|IPR013149|IPR013154|IPR014188|IPR016040	Alcohol dehydrogenase GroES-like|Alcohol dehydrogenase superfamily, zinc-type|Alcohol dehydrogenase, C-terminal|GroES-like|NAD(P)-binding domain|Quinone oxidoreductase putative, YhdH/YhfP	GO:0008270|GO:0016491|GO:0055114	G3DSA:3.40.50.720|G3DSA:3.90.180.10|PF00107|PF08240|PTHR11695|PTHR11695:SF13|SSF50129|SSF51735|TIGR02823
yhdJ|yhdJ|AP_003802.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001091|IPR002052|IPR002941	DNA methylase N-4/N-6|DNA methylase, N-6 adenine-specific, conserved site|Restriction/modification DNA-methylase	GO:0003676|GO:0003677|GO:0006306|GO:0008168|GO:0008170|GO:0032259	G3DSA:3.40.50.150|PF01555|PR00508|PS00092|SSF53335
yhdL|yhdL|AP_004499.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR005589	Protein of unknown function DUF331		PF03889
yhdN|yhdN|AP_004497.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR018961	DnaJ homologue, subfamily C, member 28, conserved domain		PF09350|PTHR24633|PTHR24633:SF15
yhdP|yhdP|AP_003787.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR011836|IPR025263	Conserved hypothetical protein CHP02099|Domain of unknown function DUF3971		PF13116|PF13502|TIGR02099
yhdT|yhdT|AP_003797.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR010398	Protein of unknown function DUF997		PD745092|PF06196
yhdU|yhdU|AP_003803.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR022540	Protein of unknown function DUF2556		PD052549|PF10831
yhdV|yhdV|AP_003807.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091				PS51257
yhdW|yhdW|AP_003808.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001638|IPR018313	Extracellular solute-binding protein, family 3|Extracellular solute-binding protein, family 3, conserved site	GO:0005215|GO:0006810|GO:0030288	G3DSA:3.40.190.10|PF00497|PS01039|PTHR30533|PTHR30533:SF0|SM00062|SSF53850
yhdX|yhdX|AP_003809.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000515|IPR010065	Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family|Binding-protein-dependent transport systems inner membrane component	GO:0005215|GO:0006810|GO:0016020|GO:0016021	G3DSA:1.10.3720.10|PF00528|PS50928|PTHR30085|SSF161098|TIGR01726
yhdY|yhdY|AP_003810.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000515|IPR010065	Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family|Binding-protein-dependent transport systems inner membrane component	GO:0005215|GO:0006810|GO:0016020|GO:0016021	G3DSA:1.10.3720.10|PF00528|PS50928|PTHR30085|SSF161098|TIGR01726
yhdZ|yhdZ|AP_003811.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003439|IPR003593|IPR017871|IPR027417	AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase	GO:0000166|GO:0005524|GO:0016887|GO:0017111	G3DSA:3.40.50.300|PF00005|PS00211|PS50893|PTHR24220|PTHR24220:SF179|SM00382|SSF52540
yheL|yheL|AP_004447.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR007215|IPR023526|IPR027396	DsrEFH-like|Sulphur relay, TusB|Sulphur relay, TusB/DsrH	GO:0002143|GO:0005737	G3DSA:3.40.1260.10|MF_01564|PF04077|SSF75169|TIGR03011
yheM|yheM|AP_004446.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003787|IPR017462|IPR027396	DsrEFH-like|Sulphur relay, DsrE/F-like protein|Sulphur relay, TusC/DsrF		G3DSA:3.40.1260.10|MF_00389|PF02635|SSF75169|TIGR03010
yheN|yheN|AP_004445.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003787|IPR017463|IPR027396	DsrEFH-like|Sulphur relay, DsrE/F-like protein|Sulphur relay, TusD/DsrE	GO:0005737|GO:0008033|GO:0016783	G3DSA:3.40.1260.10|MF_00390|PF02635|SSF75169|TIGR03012
yheO|yheO|AP_004444.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR013559	YheO-like		PD037769|PF08348|PF13309
yheS|yheS|AP_004437.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003439|IPR003593|IPR017871|IPR027417	AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase	GO:0000166|GO:0005524|GO:0016887|GO:0017111	G3DSA:3.40.50.300|PF00005|PF12848|PS00211|PS50893|PTHR19211|PTHR19211:SF13|SM00382|SSF52540
yheT|yheT|AP_004436.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000073|IPR000952|IPR012020	AB-hydrolase YheT, putative|Alpha/beta hydrolase fold-1|Uncharacterised protein family UPF0017, hydrolase-like, conserved site	GO:0004091	G3DSA:3.40.50.1820|PF00561|PIRSF005211|PS01133|PTHR10794|PTHR10794:SF7|SSF53474
yheU|yheU|AP_004435.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR010648	Uncharacterised protein family UPF0270		G3DSA:1.10.10.610|MF_00690|PD026997|PF06794|PIRSF006169|SSF118001
yheV|yheV|AP_004440.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR012658	Conserved hypothetical protein CHP02443		PF09526|TIGR02443
yhfA|yhfA|AP_004433.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003718|IPR015946	K homology domain-like, alpha/beta|Peroxiredoxin, OsmC-like protein	GO:0006950	G3DSA:2.20.25.10|G3DSA:3.30.300.20|PF02566|SSF82784
yhfG|yhfG|AP_004427.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR022541	Protein of unknown function DUF2559		PD026929|PF10832
yhfK|yhfK|AP_004431.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR010020	Integral membrane protein, YccS/YhfK		PF12805|PF13515|TIGR01667
yhfL|yhfL|AP_004420.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR025318	Protein of unknown function DUF4223		PF13978|PS51257
yhfS|yhfS|AP_004414.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004839|IPR015421|IPR015424	Aminotransferase, class I/classII|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1	GO:0003824|GO:0009058|GO:0030170	G3DSA:3.40.640.10|PF00155|SSF53383
yhfT|yhfT|AP_004413.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR019733	Uncharacterised protein family YhfT		PF10797
yhfU|yhfU|AP_004412.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR021238	Protein of unknown function DUF2620		PF10941
yhfW|yhfW|AP_004410.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR006124|IPR010045|IPR017849|IPR017850	Alkaline phosphatase-like, alpha/beta/alpha|Alkaline-phosphatase-like, core domain|Metalloenzyme|Phosphopentomutase	GO:0000287|GO:0003824|GO:0005737|GO:0008152|GO:0008973|GO:0009117|GO:0043094|GO:0046872	G3DSA:3.40.720.10|PF01676|PIRSF001491|PTHR21110|PTHR21110:SF0|SSF53649
yhfX|yhfX|AP_004409.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001608	Alanine racemase, N-terminal		G3DSA:3.20.20.10|PF01168|SSF51419
yhfY|yhfY|AP_004408.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR011608	PRD	GO:0006355	G3DSA:1.10.1790.10|PF00874|PS51372|SSF63520
yhfZ|yhfZ|AP_004407.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR011991	Winged helix-turn-helix DNA-binding domain		G3DSA:1.10.10.10|G3DSA:3.40.190.10|SSF53850
yhgA|yhgA|AP_004379.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR006842|IPR010106	Conserved hypothetical protein CHP01784|Transposase (putative), YhgA-like		PF04754|TIGR01784
yhgE|yhgE|AP_004388.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR025291	Protein of unknown function DUF4153		PF13687
yhgF|yhgF|AP_004383.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003029|IPR006641|IPR010994|IPR012337|IPR012340|IPR018974|IPR022967|IPR023097|IPR023319|IPR023323	Nucleic acid-binding, OB-fold|RNA-binding domain, S1|Ribonuclease H-like domain|Ribosomal protein S1, RNA-binding domain|RuvA domain 2-like|Tex RuvX-like domain|Tex-like domain|Tex-like protein, HTH domain|Tex-like protein, N-terminal|YqgF/RNase H-like domain	GO:0003676|GO:0003723|GO:0006139|GO:0016788	G3DSA:1.10.10.650|G3DSA:1.10.150.310|G3DSA:1.10.3500.10|G3DSA:2.40.50.140|G3DSA:3.30.420.140|PF00575|PF09371|PF12836|PS50126|PTHR10724|SM00316|SM00732|SSF158832|SSF47781|SSF50249|SSF53098
yhgG|yhgG|AP_004380.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR015102|IPR023732	Ferrous iron transport protein C|Transcriptional regulator HTH-type, FeoC		MF_01586|PF09012|SSF46785
yhgN|yhgN|AP_004357.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002771	Multiple antibiotic resistance (MarC)-related	GO:0016021	PF01914|TIGR00427
yhhA|yhhA|AP_004344.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR020158	Protein of unknown function DUF2756		PD059127|PF10956
yhhF|yhhF|AP_004327.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002052|IPR004398	DNA methylase, N-6 adenine-specific, conserved site|RNA methyltransferase, RsmD	GO:0003676|GO:0008168|GO:0031167|GO:0032259	G3DSA:3.40.50.150|PF03602|PIRSF004553|PS00092|PTHR18895|PTHR18895:SF28|SSF53335|TIGR00095
yhhH|yhhH|AP_004309.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091				
yhhI|yhhI|AP_004308.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002559	Transposase, IS4-like	GO:0003677|GO:0004803|GO:0006313	PF01609|PF13808|PTHR30298
yhhJ|yhhJ|AP_004307.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000412	ABC-2	GO:0005524|GO:0006810|GO:0016020|GO:0042626	PF12698|PS51012|PTHR30294
yhhK|yhhK|AP_004333.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000182|IPR016181|IPR024612	Acyl-CoA N-acyltransferase|Domain of unknown function DUF3749|GNAT domain	GO:0008080	G3DSA:3.40.630.30|PF12568|PS51186|SSF55729
yhhL|yhhL|AP_004326.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR009525	Protein of unknown function DUF1145		PF06611
yhhM|yhhM|AP_004325.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR019635	Protein of unknown function DUF2500		PF10694
yhhN|yhhN|AP_004324.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR012506	YhhN-like	GO:0016021	PF07947
yhhP|yhhP|AP_004322.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001455|IPR022931	Sulphurtransferase TusA|TusA-like domain	GO:0016783	G3DSA:3.30.110.40|MF_00413|PF01206|PS01148|SSF64307
yhhQ|yhhQ|AP_004321.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003744	Protein of unknown function DUF165		PF02592|TIGR00697
yhhS|yhhS|AP_004319.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR011701|IPR016196	Major facilitator superfamily|Major facilitator superfamily domain, general substrate transporter	GO:0016021|GO:0055085	G3DSA:1.20.1250.20|PF07690|PTHR24003|SSF103473
yhhT|yhhT|AP_004318.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002549	Uncharacterised protein family UPF0118		PF01594|PTHR21716
yhhW|yhhW|AP_004353.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003829|IPR011051|IPR012093|IPR014710	Pirin|Pirin, N-terminal domain|RmlC-like cupin domain|RmlC-like jelly roll fold		G3DSA:2.60.120.10|PF02678|PIRSF006232|PTHR13903|PTHR13903:SF0|SSF51182
yhhX|yhhX|AP_004352.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000683|IPR004104|IPR016040	NAD(P)-binding domain|Oxidoreductase, C-terminal|Oxidoreductase, N-terminal	GO:0008152|GO:0016491|GO:0055114	G3DSA:3.30.360.10|G3DSA:3.40.50.720|PF01408|PF02894|PTHR22604|PTHR22604:SF53|SSF51735|SSF55347
yhhY|yhhY|AP_004351.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000182|IPR016181	Acyl-CoA N-acyltransferase|GNAT domain	GO:0008080	G3DSA:3.40.630.30|PF00583|PS51186|PTHR23091|PTHR23091:SF66|SSF55729
yhhZ|yhhZ|AP_004350.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR008514|IPR017728|IPR024622	Colicin/pyocin, DNase domain|Type VI secretion system effector, Hcp1|Virulence factor, secretion apparatus	GO:0004519	G3DSA:2.30.110.20|PF05638|PF12639|SSF141452|SSF54060|TIGR03344
yhiD|yhiD|AP_004285.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003416	MgtC/SapB/SrpB transporter	GO:0016020	PF02308|PR01837
yhiF|yhiF|AP_004286.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000792|IPR011991|IPR016032	Signal transduction response regulator, C-terminal effector|Transcription regulator LuxR, C-terminal|Winged helix-turn-helix DNA-binding domain	GO:0003677|GO:0003700|GO:0005622|GO:0006355|GO:0043565	G3DSA:1.10.10.10|PF00196|PS50043|SM00421|SSF46894
yhiI|yhiI|AP_004305.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003997|IPR006143	RND efflux pump, membrane fusion protein|RTX secretion protein D, Gram-negative bacteria	GO:0009306|GO:0016020|GO:0055085	G3DSA:2.40.50.100|PF00529|PR01490|PTHR30438|PTHR30438:SF0|SSF111369
yhiJ|yhiJ|AP_004304.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR025123	Domain of unknown function DUF4049		PF13258|SSF56300
yhiL|yhiL|AP_004303.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR025123	Domain of unknown function DUF4049		PF13258|SSF56300
yhiM|yhiM|AP_004302.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR021240	Protein of unknown function DUF2776		PF10951
yhiN|yhiN|AP_004301.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004792|IPR013027|IPR023166	Conserved hypothetical protein CHP00275, flavoprotein HI0933-like|FAD-dependent pyridine nucleotide-disulphide oxidoreductase|HI0933 insert-like domain	GO:0055114	G3DSA:1.10.8.260|G3DSA:2.40.30.10|G3DSA:3.50.50.60|PF03486|PR00368|PR00411|PTHR10668|PTHR10668:SF49|SSF160996|SSF51905|TIGR00275
yhiO|yhiO|AP_004299.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR019598	Universal stress protein B		MF_01088|PF10625
yhiP|yhiP|AP_004297.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000109|IPR005279|IPR016196|IPR018456|IPR023778	Amino acid/peptide transporter family|Amino acid/peptide transporter family, dipeptide/tripeptide permease B|Major facilitator superfamily domain, general substrate transporter|PTR2 family proton/oligopeptide symporter, conserved site|Proton-dependent oligopeptide transporter family	GO:0005215|GO:0006810|GO:0006857|GO:0015197|GO:0015833|GO:0016020	G3DSA:1.20.1250.20|MF_01879|PF00854|PS01022|PS01023|PTHR11654|PTHR11654:SF6|SSF103473|TIGR00924
yhiQ|yhiQ|AP_004296.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR007536	Ribosomal RNA small subunit methyltransferase J		G3DSA:3.40.1630.10|G3DSA:3.40.50.150|MF_01523|PF04445|SSF53335
yhiR|yhiR|AP_004294.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002052|IPR007473	DNA methylase, N-6 adenine-specific, conserved site|Protein of unknown function DUF519	GO:0003676|GO:0008168|GO:0032259	G3DSA:3.40.50.150|PF04378|PS00092|PTHR30596|PTHR30596:SF0|SSF53335
yhiS|yhiS|AP_004289.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091				SSF141571
yhjA|yhjA|AP_004275.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003088|IPR004852|IPR009056|IPR025992	Cytochrome c domain|Cytochrome c, class I|Di-haem cytochrome c peroxidase|Haem-binding domain	GO:0005506|GO:0009055|GO:0016491|GO:0020037|GO:0055114	G3DSA:1.10.760.10|PF00034|PF03150|PF14376|PS51007|PTHR30600|PTHR30600:SF0|SSF46626
yhjB|yhjB|AP_004273.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000792|IPR011991|IPR016032	Signal transduction response regulator, C-terminal effector|Transcription regulator LuxR, C-terminal|Winged helix-turn-helix DNA-binding domain	GO:0003677|GO:0003700|GO:0005622|GO:0006355|GO:0043565	G3DSA:1.10.10.10|PF00196|PR00038|PS00622|PS50043|SM00421|SSF46894
yhjC|yhjC|AP_004272.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000847|IPR005119|IPR011991	LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain	GO:0003700|GO:0006355	G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PS50931|PTHR32459|PTHR32459:SF0|SSF46785|SSF53850
yhjD|yhjD|AP_004271.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR005274|IPR017039	Inner membrane protein YhjD|Virulence factor BrkB		PF03631|PIRSF035875|TIGR00766
yhjE|yhjE|AP_004270.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004736|IPR005828|IPR005829|IPR011701|IPR016196|IPR020846	Citrate-proton symport|General substrate transporter|Major facilitator superfamily|Major facilitator superfamily domain|Major facilitator superfamily domain, general substrate transporter|Sugar transporter, conserved site	GO:0005215|GO:0006810|GO:0016020|GO:0016021|GO:0022857|GO:0055085	G3DSA:1.20.1250.20|PF00083|PF07690|PS00216|PS50850|PTHR24063|PTHR24063:SF153|SSF103473|TIGR00883
yhjG|yhjG|AP_004269.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR007844	AsmA		PF05170|PTHR30441
yhjH|yhjH|AP_004268.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001633	Diguanylate phosphodiesterase, EAL domain		G3DSA:3.20.20.450|PF00563|PS50883|SM00052|SSF141868
yhjJ|yhjJ|AP_004266.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR007863|IPR011237|IPR011249|IPR011765	Metalloenzyme, LuxS/M16 peptidase-like|Peptidase M16 domain|Peptidase M16, C-terminal domain|Peptidase M16, N-terminal	GO:0003824|GO:0046872	G3DSA:3.30.830.10|PF00675|PF05193|PTHR11851|PTHR11851:SF76|SSF63411
yhjK|yhjK|AP_004264.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000160|IPR001054|IPR001633|IPR003660	Adenylyl cyclase class-3/4/guanylyl cyclase|Diguanylate phosphodiesterase, EAL domain|GGDEF domain|HAMP linker domain	GO:0004871|GO:0007165|GO:0009190|GO:0016021|GO:0016849|GO:0035556	G3DSA:3.20.20.450|G3DSA:3.30.70.270|PF00563|PF00672|PF00990|PS50883|PS50885|PS50887|PTHR30394|PTHR30394:SF0|SM00052|SM00267|SSF141868|SSF55073
yhjR|yhjR|AP_004259.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR024487	Protein of unknown function DUF2629		PD053230|PF10945
yhjV|yhjV|AP_004254.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR018227	Tryptophan/tyrosine permease		PF03222
yhjX|yhjX|AP_004247.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004741|IPR011701|IPR016196|IPR020846	Major facilitator superfamily|Major facilitator superfamily domain|Major facilitator superfamily domain, general substrate transporter|Oxalate/formate antiporter family transporter	GO:0005215|GO:0006810|GO:0016021|GO:0055085	G3DSA:1.20.1250.20|PF07690|PS50850|PTHR11360|PTHR11360:SF54|SSF103473|TIGR00890
yhjY|yhjY|AP_004246.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR005546|IPR006315|IPR016955	Autotransporter beta-domain|Autotransporter, YhjY, predicted|Outer membrane autotransporter barrel	GO:0019867	G3DSA:2.40.128.130|PF03797|PIRSF030748|PS51208|SSF103515|TIGR01414
yiaA|yiaA|AP_004230.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR008024	YiaAB two helix		PF05360
yiaB|yiaB|AP_004229.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR008024	YiaAB two helix		PF05360|PS51257
yiaC|yiaC|AP_004244.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000182|IPR016181	Acyl-CoA N-acyltransferase|GNAT domain	GO:0008080	G3DSA:3.40.630.30|PF00583|PS51186|PTHR23091|PTHR23091:SF41|SSF55729
yiaD|yiaD|AP_004242.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR006664|IPR006665|IPR006690	Outer membrane protein, OmpA-like, conserved site|Outer membrane protein, OmpA/MotB, C-terminal|Outer membrane protein, bacterial	GO:0009279|GO:0016021	G3DSA:3.30.1330.60|PF00691|PF13488|PR01021|PR01023|PS01068|PS51123|PS51257|PTHR30128|PTHR30128:SF0|SSF103088
yiaF|yiaF|AP_004240.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR021413	Protein of unknown function DUF3053		PF11254|PS51257
yiaG|yiaG|AP_004239.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001387|IPR010982	Helix-turn-helix|Lambda repressor-like, DNA-binding domain	GO:0003677|GO:0043565	G3DSA:1.10.260.40|PF01381|PS50943|SM00530|SSF47413
yiaH|yiaH|AP_004231.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002656	Acyltransferase 3	GO:0016747	PF01757
yiaI|yiaI|AP_004219.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001450|IPR017896|IPR017900	4Fe-4S binding domain|4Fe-4S ferredoxin, iron-sulphur binding, conserved site|4Fe-4S ferredoxin-type, iron-sulpur binding domain	GO:0009055|GO:0051536	G3DSA:3.30.70.20|PF00037|PF12798|PS00198|PS51379|PTHR11938|PTHR11938:SF10|SSF54862
yiaJ|yiaJ|AP_004218.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR005471|IPR011991|IPR014757	Transcription regulator IclR, C-terminal|Transcription regulator IclR, N-terminal|Winged helix-turn-helix DNA-binding domain	GO:0003677|GO:0006355	G3DSA:1.10.10.10|G3DSA:3.30.450.40|PF01614|PF09339|PS51077|PS51078|PTHR30136|PTHR30136:SF0|SM00346|SSF46785|SSF55781
yiaK|yiaK|AP_004217.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003767|IPR023689	2,3-diketo-L-gulonate reductase|Malate/L-lactate dehydrogenase	GO:0008152|GO:0016491|GO:0016616|GO:0047559|GO:0055114|GO:0070403	G3DSA:1.10.1530.10|G3DSA:3.30.1370.60|G3DSA:3.30.60.50|MF_00820|PF02615|PTHR11091|PTHR11091:SF0|SSF89733
yiaL|yiaL|AP_004216.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004375	Conserved hypothetical protein CHP00022		G3DSA:2.60.120.370|PF04074|SSF51197|TIGR00022
yiaM|yiaM|AP_004215.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR007387	Tripartite ATP-independent periplasmic transporter, DctQ component		PF04290
yiaN|yiaN|AP_004214.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004681|IPR010656	TRAP C4-dicarboxylate transport system permease DctM subunit|TRAP transporter permease protein	GO:0016021	PF06808|PIRSF006066|PTHR32388|PTHR32388:SF6|TIGR00786
yiaO|yiaO|AP_004213.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004682|IPR018389	TRAP dicarboxylate transporter|Tripartite ATP-independent periplasmic transporter	GO:0006810|GO:0030288	PF03480|PIRSF006470|SSF53850|TIGR00787
yiaT|yiaT|AP_004208.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR010583	MltA-interacting MipA		PF06629
yiaU|yiaU|AP_004207.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000847|IPR005119|IPR011991	LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain	GO:0003700|GO:0006355	G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PS50931|PTHR32459|PTHR32459:SF0|SSF46785|SSF53850
yiaV|yiaV|AP_004206.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR006143	RND efflux pump, membrane fusion protein	GO:0016020|GO:0055085	G3DSA:2.40.50.100|PF00529|PTHR30386|PTHR30386:SF0|SSF111369
yiaW|yiaW|AP_004205.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR011223	Uncharacterised conserved protein UCP028770		PF11742|PIRSF028770
yiaY|yiaY|AP_004203.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001670|IPR018211	Alcohol dehydrogenase, iron-type|Alcohol dehydrogenase, iron-type, conserved site	GO:0016491|GO:0046872|GO:0055114	G3DSA:1.20.1090.10|G3DSA:3.40.50.1970|PF00465|PS00060|PS00913|PTHR11496|PTHR11496:SF46|SSF56796
yibA|yibA|AP_004198.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR011989|IPR016024	Armadillo-like helical|Armadillo-type fold	GO:0005488	G3DSA:1.25.10.10|PF13646|PTHR12697|SSF48371
yibD|yibD|AP_004176.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001173	Glycosyl transferase, family 2		G3DSA:3.90.550.10|PF00535|PTHR22916|SSF53448
yibF|yibF|AP_004200.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004045|IPR004046|IPR010987|IPR012336|IPR017933	Glutathione S-transferase, C-terminal|Glutathione S-transferase, C-terminal-like|Glutathione S-transferase, N-terminal|Glutathione S-transferase/chloride channel, C-terminal|Thioredoxin-like fold	GO:0005515	G3DSA:1.20.1050.10|G3DSA:3.40.30.10|PF00043|PF13417|PS50404|PS50405|PTHR11260|PTHR11260:SF28|SSF47616|SSF52833
yibG|yibG|AP_004196.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR011990	Tetratricopeptide-like helical	GO:0005515	G3DSA:1.25.40.10|SSF81901
yibH|yibH|AP_004195.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR006143	RND efflux pump, membrane fusion protein	GO:0016020|GO:0055085	G3DSA:2.40.50.100|PF00529|PTHR30386|PTHR30386:SF0|SSF111369
yibI|yibI|AP_004194.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR011223	Uncharacterised conserved protein UCP028770		PF11742|PIRSF028770
yibJ|yibJ|AP_004197.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001826|IPR022385	RHS protein|Rhs repeat-associated core		PF03527|PR00394|PTHR32305|PTHR32305:SF3|TIGR03696
yibK|yibK|AP_004185.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001537|IPR016914	tRNA (cytidine/uridine-2'-O-)-methyltransferase|tRNA/rRNA methyltransferase, SpoU	GO:0001510|GO:0003723|GO:0006396|GO:0008168|GO:0008173	G3DSA:3.40.1280.10|MF_01885|PF00588|PIRSF029256|PTHR12029|PTHR12029:SF31|SSF75217|TIGR00185
yibL|yibL|AP_004189.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR021230	Protein of unknown function DUF2810		PF10928
yibN|yibN|AP_004180.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001763	Rhodanese-like domain		G3DSA:3.40.250.10|PF00581|PS50206|PTHR13253|PTHR13253:SF10|SM00450|SSF52821
yibQ|yibQ|AP_004177.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002509|IPR006837|IPR011330	Glycoside hydrolase/deacetylase, beta/alpha-barrel|Polysaccharide deacetylase|Protein of unknown function DUF610, YibQ	GO:0003824|GO:0005975|GO:0016810	G3DSA:3.20.20.370|PF04748|PTHR30105|PTHR30105:SF0|SSF88713
yibT|yibT|AP_004190.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR011326	Homologue of  theta DNA polymerase III		G3DSA:1.20.58.250
yicC|yicC|AP_004148.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR005229|IPR013527|IPR013551	Conserved hypothetical protein CHP00255|Domain of unknown function DUF1732|YicC-like, N-terminal		PF03755|PF08340|PTHR30636|TIGR00255
yicE|yicE|AP_004138.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR006042|IPR006043	Xanthine/uracil permease|Xanthine/uracil/vitamin C permease	GO:0005215|GO:0006810|GO:0016020|GO:0055085	PF00860|PS01116|PTHR11119|PTHR11119:SF3|TIGR00801
yicG|yicG|AP_004146.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR005115	Uncharacterised domain UPF0126		PF03458|PTHR30506|PTHR30506:SF0
yicH|yicH|AP_004137.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR007844	AsmA		PF05170
yicI|yicI|AP_004136.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000322|IPR011013|IPR013785|IPR017853|IPR025887	Aldolase-type TIM barrel|Galactose mutarotase-like domain|Glycoside hydrolase family 31, N-terminal domain|Glycoside hydrolase, family 31|Glycoside hydrolase, superfamily	GO:0003824|GO:0004553|GO:0005975|GO:0030246	G3DSA:3.20.20.70|PF01055|PF13802|PTHR22762|PTHR22762:SF38|SSF117125|SSF51011|SSF51445|SSF74650
yicJ|yicJ|AP_004135.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001927|IPR016196|IPR018043	Major facilitator superfamily domain, general substrate transporter|Sodium:galactoside symporter|Sodium:galactoside symporter, conserved site	GO:0005215|GO:0006814|GO:0016020	G3DSA:1.20.1250.20|PF13347|PS00872|PTHR32425|PTHR32425:SF2|SSF103473|TIGR00792
yicL|yicL|AP_004133.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000620|IPR004779	Carboxylate/Amino Acid/Amine Transporter|Drug/metabolite transporter	GO:0016020|GO:0016021	PF00892|SSF103481|TIGR00950
yicM|yicM|AP_004130.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR011701|IPR016196|IPR020846|IPR023680	Major facilitator superfamily|Major facilitator superfamily domain|Major facilitator superfamily domain, general substrate transporter|Purine ribonucleoside efflux pump, NepI	GO:0015211|GO:0015860|GO:0016021|GO:0055085	G3DSA:1.20.1250.20|MF_01189|PF07690|PS50850|PTHR24003|SSF103473
yicN|yicN|AP_004129.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR009587	Protein of unknown function DUF1198		PD093913|PF06711
yicO|yicO|AP_004128.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR006043|IPR026033	Purine permease PbuG-like|Xanthine/uracil/vitamin C permease	GO:0005215|GO:0006810|GO:0016020|GO:0055085	PF00860|PIRSF005353|PTHR11119|PTHR11119:SF9
yicR|yicR|AP_004153.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001405|IPR010994|IPR020891|IPR022820|IPR025657	RadC protein|RadC-like JAB domain|RuvA domain 2-like|Uncharacterised protein family UPF0758, YicR subfamily|Uncharacterised protein family UPF0758, conserved site		G3DSA:3.40.140.10|MF_00018|PF04002|PS01302|PTHR30471|PTHR30471:SF0|SSF47781|TIGR00608
yicS|yicS|AP_004131.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091				
yidA|yidA|AP_004096.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000150|IPR006379|IPR023214	Cof protein|HAD-like domain|HAD-superfamily hydrolase, subfamily IIB	GO:0003824|GO:0008152|GO:0016787	G3DSA:3.30.1240.10|G3DSA:3.40.50.1000|PF00702|PS01228|PS01229|PTHR21485|PTHR21485:SF10|SSF56784|TIGR00099|TIGR01484
yidB|yidB|AP_004095.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR009282|IPR027405	Protein of unknown function DUF937|YidB-like		G3DSA:1.10.10.690|PF06078|SSF140804
yidC|yidC|AP_004087.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001708|IPR019998	Membrane insertase OXA1/ALB3/YidC|Membrane insertase YidC	GO:0016021|GO:0051205	MF_01810|PF02096|PR00701|PR01900|PTHR12428|PTHR12428:SF11|TIGR03592|TIGR03593
yidD|yidD|AP_004088.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002696	Putative membrane protein insertion efficiency factor		MF_00386|PD004225|PF01809|TIGR00278
yidE|yidE|AP_004108.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR006037|IPR006512|IPR023018	Regulator of K+ conductance, C-terminal|Transport protein YidE, putative|YidE/YbjL duplication	GO:0006813|GO:0008324	G3DSA:3.30.70.1450|MF_01016|PF02080|PF06826|PS51202|PTHR30445|PTHR30445:SF0|SSF116726|TIGR01625
yidF|yidF|AP_004118.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091				PD968187
yidG|yidG|AP_004117.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003807|IPR020264	Domain of unknown function DUF202|Uncharacterised protein family YidG		PD277113|PF02656
yidH|yidH|AP_004116.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003807	Domain of unknown function DUF202		PF02656
yidI|yidI|AP_004115.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR016512	Uncharacterised protein family, inner membrane YidI		PIRSF007312
yidJ|yidJ|AP_004114.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000917|IPR017849|IPR017850|IPR024607	Alkaline phosphatase-like, alpha/beta/alpha|Alkaline-phosphatase-like, core domain|Sulfatase|Sulfatase, conserved site	GO:0003824|GO:0008152|GO:0008484	G3DSA:3.30.1120.10|G3DSA:3.40.720.10|PF00884|PS00149|PS00523|PTHR10342|PTHR10342:SF109|SSF53649
yidK|yidK|AP_004113.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001734|IPR018212|IPR019900	Sodium/solute symporter|Sodium/solute symporter, conserved site|Sodium/solute symporter, subgroup	GO:0005215|GO:0006810|GO:0016020|GO:0055085	PF00474|PS00456|PS50283|PTHR11819|PTHR11819:SF7|TIGR00813
yidL|yidL|AP_004112.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003313|IPR009057|IPR018060|IPR018062	DNA binding HTH domain, AraC-type|HTH domain AraC-type, conserved site|Homeodomain-like|Transcription regulator HTH, AraC, arabinose-binding/dimerisation	GO:0003677|GO:0003700|GO:0005622|GO:0006355|GO:0043565	G3DSA:1.10.10.60|G3DSA:2.60.120.280|PF00165|PF02311|PS00041|PS01124|PTHR11019|SM00342|SSF46689|SSF51215
yidP|yidP|AP_004109.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000524|IPR011663|IPR011991	Transcription regulator HTH, GntR|UbiC transcription regulator-associated|Winged helix-turn-helix DNA-binding domain	GO:0003677|GO:0003700|GO:0005622|GO:0006355	G3DSA:1.10.10.10|G3DSA:3.40.1410.10|PF00392|PF07702|PR00035|PS50949|PTHR11751|PTHR11751:SF1|SM00345|SM00866|SSF46785|SSF64288
yidQ|yidQ|AP_004105.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR010780	Protein of unknown function DUF1375		PF07119|PS51257
yidR|yidR|AP_004104.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR011042|IPR022223	Protein of unknown function DUF3748|Six-bladed beta-propeller, TolB-like		G3DSA:2.120.10.30|PF12566|SSF82171
yidX|yidX|AP_004097.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091				PS51257
yidZ|yidZ|AP_004078.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000847|IPR005119|IPR011991|IPR023746	LysR, substrate-binding|Transcription regulator HTH, LysR|Transcription regulator HTH, YidZ|Winged helix-turn-helix DNA-binding domain	GO:0003700|GO:0006355	G3DSA:1.10.10.10|G3DSA:3.40.190.10|MF_01607|PF00126|PF03466|PS50931|PTHR30118|SSF46785|SSF53850
yieE|yieE|AP_004075.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR008278	4'-phosphopantetheinyl transferase superfamily	GO:0000287|GO:0008897|GO:0009059	G3DSA:3.90.470.20|PTHR12215|PTHR12215:SF2
yieF|yieF|AP_004074.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR005025	NADPH-dependent FMN reductase		G3DSA:3.40.50.360|PF03358|PTHR30543|PTHR30543:SF0|SSF52218
yieG|yieG|AP_004073.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR006043|IPR026033	Purine permease PbuG-like|Xanthine/uracil/vitamin C permease	GO:0005215|GO:0006810|GO:0016020|GO:0055085	PF00860|PIRSF005353|PTHR11119|PTHR11119:SF9
yieH|yieH|AP_004072.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR005833|IPR006402|IPR023198|IPR023214	HAD-like domain|HAD-superfamily hydrolase, subfamily IA, variant 3|Haloacid dehalogenase/epoxide hydrolase|Phosphoglycolate phosphatase, domain 2	GO:0008152|GO:0016787	G3DSA:1.10.150.240|G3DSA:3.40.50.1000|PF13419|PR00413|PTHR18901|SSF56784|TIGR01509
yieI|yieI|AP_004071.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR020222	Inner membrane CbrB	GO:0016021	PD092472
yieK|yieK|AP_004069.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004547|IPR006148|IPR018321	Glucosamine-6-phosphate isomerase|Glucosamine-6-phosphate isomerase, conserved site|Glucosamine/galactosamine-6-phosphate isomerase	GO:0004342|GO:0005975|GO:0006044	G3DSA:3.40.50.1360|PF01182|PS01161|PTHR11280|PTHR11280:SF0|SSF100950
yieL|yieL|AP_004068.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000801|IPR004193|IPR013783|IPR014756	Glycoside hydrolase, family 13, N-terminal|Immunoglobulin E-set|Immunoglobulin-like fold|Putative esterase	GO:0004553|GO:0005975	G3DSA:2.60.40.10|G3DSA:3.40.50.1820|PF00756|PF02922|PTHR10907|PTHR10907:SF16|SSF53474|SSF81296
yieM|yieM|AP_004042.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002035|IPR008912|IPR023481	Uncharacterised protein family CoxE-like|Uncharacterised protein family ViaA|von Willebrand factor, type A	GO:0005515	MF_01626|PF05762|SM00327|SSF53300
yieN|yieN|AP_004041.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003593|IPR011704|IPR022547|IPR023671|IPR027417	AAA+ ATPase domain|ATPase RavA|ATPase, RavA, C-terminal|ATPase, dynein-related, AAA domain|P-loop containing nucleoside triphosphate hydrolase	GO:0000166|GO:0005524|GO:0005737|GO:0016820|GO:0016887|GO:0017111	G3DSA:3.40.50.300|MF_01625|PF07728|PF12592|PTHR32204|PTHR32204:SF0|SM00382|SSF52540
yieP|yieP|AP_004032.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000524|IPR008920|IPR011711|IPR011991|IPR027376	FadR/GntR C-terminal domain|Fatty acid responsive transcription factor FadR, C-terminal|GntR, C-terminal|Transcription regulator HTH, GntR|Winged helix-turn-helix DNA-binding domain	GO:0000062|GO:0003677|GO:0003700|GO:0005622|GO:0006355|GO:0019217	G3DSA:1.10.10.10|G3DSA:1.20.120.530|PF00392|PF07729|PR00035|PS50949|PTHR11751|PTHR11751:SF109|SM00345|SM00895|SSF46785|SSF48008
yifB|yifB|AP_004029.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000523|IPR003593|IPR004482|IPR014721|IPR020568|IPR025158|IPR027417	AAA+ ATPase domain|Magnesium chelatase, ChlI subunit|Mg chelatase-related protein|Mg chelatase-related protein, C-terminal domain|P-loop containing nucleoside triphosphate hydrolase|Ribosomal protein S5 domain 2-type fold|Ribosomal protein S5 domain 2-type fold, subgroup	GO:0000166|GO:0015979|GO:0015995|GO:0016851|GO:0017111	G3DSA:3.30.230.10|G3DSA:3.40.50.300|PF01078|PF13335|PF13541|PTHR32039|PTHR32039:SF0|SM00382|SSF52540|SSF54211|TIGR00368
yifE|yifE|AP_004030.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR007335	Protein of unknown function DUF413		PF04219
yifK|yifK|AP_004001.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002293|IPR004840|IPR004841	Amino acid permease domain|Amino acid permease, conserved site|Amino acid/polyamine transporter I	GO:0003333|GO:0006810|GO:0006865|GO:0015171|GO:0016020|GO:0016021|GO:0055085	PF00324|PIRSF006060|PS00218|PTHR11785|PTHR11785:SF28
yifL|yifL|AP_003991.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091				PF13627|PS51257
yigA|yigA|AP_003989.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR007435	Protein of unknown function DUF484		PF04340
yigB|yigB|AP_003987.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR006439|IPR023214	HAD-like domain|HAD-superfamily hydrolase, subfamily IA, variant 1	GO:0008152|GO:0008967	G3DSA:3.40.50.1000|PF00702|PTHR12725|PTHR12725:SF11|SSF56784|TIGR01549
yigE|yigE|AP_003985.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR018711	Domain of unknown function DUF2233		PF09992
yigF|yigF|AP_003983.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR024399	Protein of unknown function DUF2628		PF10947
yigG|yigG|AP_003982.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR020332	Uncharacterised protein family, inner membrane YigG		PD084423
yigI|yigI|AP_003980.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003736|IPR006683	Phenylacetic acid degradation-related domain|Thioesterase superfamily		G3DSA:3.10.129.10|PF03061|PTHR12418|SSF54637|TIGR00369
yigL|yigL|AP_003974.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000150|IPR006379|IPR023214	Cof protein|HAD-like domain|HAD-superfamily hydrolase, subfamily IIB	GO:0003824|GO:0008152|GO:0016787	G3DSA:3.30.1240.10|G3DSA:3.40.50.1000|PF08282|PS01228|PS01229|PTHR10000|PTHR10000:SF0|SSF56784|TIGR00099|TIGR01484
yigM|yigM|AP_003973.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000620|IPR004779	Carboxylate/Amino Acid/Amine Transporter|Drug/metabolite transporter	GO:0016020|GO:0016021	PF00892|SSF103481|TIGR00950
yigP|yigP|AP_003966.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003033	SCP2 sterol-binding domain	GO:0032934	PF02036|SSF55718
yigZ|yigZ|AP_003954.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000640|IPR001498|IPR009022|IPR015269|IPR015796|IPR020568|IPR020569|IPR023582	Elongation factor G, III-V domain|Impact family|Impact family, bacterial/archaeal|Impact, N-terminal|Ribosomal protein S5 domain 2-type fold|Translation elongation factor EFG, V domain|Uncharacterised domain UPF0029, Impact, C-terminal|Uncharacterised protein family UPF0029, Impact, conserved site		G3DSA:3.30.230.30|G3DSA:3.30.70.240|PF01205|PF09186|PS00910|PTHR16301|SSF54211|SSF54980|TIGR00257
yihA|yihA|AP_003943.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR006073|IPR019987|IPR027417	GTP binding domain|GTP-binding protein, ribosome biogenesis, YsxC|P-loop containing nucleoside triphosphate hydrolase	GO:0000917|GO:0005525	G3DSA:3.40.50.300|MF_00321|PF01926|PTHR11649|SSF52540|TIGR03598
yihD|yihD|AP_003949.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR009383	Protein of unknown function DUF1040		PD029038|PF06288
yihE|yihE|AP_003948.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002575|IPR011009	Aminoglycoside phosphotransferase|Protein kinase-like domain	GO:0016772	G3DSA:3.90.1200.10|PF01636|PTHR30554|SSF56112
yihF|yihF|AP_003946.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR010352	Protein of unknown function DUF945		PF06097
yihG|yihG|AP_003945.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002123	Phospholipid/glycerol acyltransferase	GO:0008152|GO:0016746	PF01553|PTHR10983|PTHR10983:SF1|SM00563|SSF69593
yihI|yihI|AP_003942.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR007336	Der GTPase activator		MF_01058|PF04220
yihL|yihL|AP_003936.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000524|IPR011663|IPR011991	Transcription regulator HTH, GntR|UbiC transcription regulator-associated|Winged helix-turn-helix DNA-binding domain	GO:0003677|GO:0003700|GO:0005622|GO:0006355	G3DSA:1.10.10.10|G3DSA:3.40.1410.10|PF00392|PF07702|PR00035|PS50949|PTHR11751|PTHR11751:SF152|SM00345|SM00866|SSF46785|SSF64288
yihM|yihM|AP_003935.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR013022	Xylose isomerase-like, TIM barrel domain		G3DSA:3.20.20.150|PF01261|SSF51658
yihN|yihN|AP_003934.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR011701|IPR016196|IPR020846	Major facilitator superfamily|Major facilitator superfamily domain|Major facilitator superfamily domain, general substrate transporter	GO:0016021|GO:0055085	G3DSA:1.20.1250.20|PF07690|PS50850|PTHR11662|PTHR11662:SF93|SSF103473
yihO|yihO|AP_003932.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001927|IPR016196|IPR018043	Major facilitator superfamily domain, general substrate transporter|Sodium:galactoside symporter|Sodium:galactoside symporter, conserved site	GO:0005215|GO:0006814|GO:0016020	G3DSA:1.20.1250.20|PF13347|PS00872|PTHR32425|PTHR32425:SF1|SSF103473|TIGR00792
yihP|yihP|AP_003931.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001927|IPR016196|IPR018043	Major facilitator superfamily domain, general substrate transporter|Sodium:galactoside symporter|Sodium:galactoside symporter, conserved site	GO:0005215|GO:0006814|GO:0016020	G3DSA:1.20.1250.20|PF13347|PS00872|PTHR32425|PTHR32425:SF1|SSF103473|TIGR00792
yihQ|yihQ|AP_003930.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000322|IPR011013|IPR017853	Galactose mutarotase-like domain|Glycoside hydrolase, family 31|Glycoside hydrolase, superfamily	GO:0003824|GO:0004553|GO:0005975|GO:0030246	PF01055|PTHR22762|PTHR22762:SF5|SSF51011|SSF51445|SSF74650
yihR|yihR|AP_003929.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR008183|IPR011013|IPR014718|IPR015443	Aldose 1-/Glucose-6-phosphate 1-epimerase|Aldose 1-epimerase|Galactose mutarotase-like domain|Glycoside hydrolase-type carbohydrate-binding, subgroup	GO:0003824|GO:0005975|GO:0016853|GO:0019318|GO:0030246	G3DSA:2.70.98.10|PF01263|PTHR10091|PTHR10091:SF0|SSF74650
yihS|yihS|AP_003928.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR008928|IPR010819|IPR012341	N-acylglucosamine 2-epimerase|Six-hairpin glycosidase|Six-hairpin glycosidase-like	GO:0003824|GO:0004476|GO:0006013	G3DSA:1.50.10.10|PF07221|SSF48208
yihT|yihT|AP_003927.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002915|IPR013785|IPR017291	Aldolase, YihT|Aldolase-type TIM barrel|DeoC/FbaB/ lacD aldolase	GO:0003824|GO:0016829|GO:0016830	G3DSA:3.20.20.70|PF01791|PIRSF037840|SSF51569
yihU|yihU|AP_003926.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002204|IPR006115|IPR008927|IPR013328|IPR015815|IPR016040	3-hydroxyisobutyrate dehydrogenase-related, conserved site|6-phosphogluconate dehydrogenase, C-terminal-like|6-phosphogluconate dehydrogenase, NADP-binding|Dehydrogenase, multihelical|Hydroxy monocarboxylic acid anion dehydrogenase, HIBADH-type|NAD(P)-binding domain	GO:0004616|GO:0006098|GO:0006573|GO:0008442|GO:0016491|GO:0016616|GO:0050662|GO:0055114	G3DSA:1.10.1040.10|G3DSA:3.40.50.720|PF03446|PIRSF000103|PS00895|PTHR22981|PTHR22981:SF7|SSF48179|SSF51735
yihV|yihV|AP_003925.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002139|IPR002173|IPR011611	Carbohydrate kinase PfkB|Carbohydrate/puine kinase, PfkB, conserved site|Ribokinase	GO:0004747|GO:0006014|GO:0016773	G3DSA:3.40.1190.20|PF00294|PR00990|PS00584|PTHR10584|PTHR10584:SF21|SSF53613
yihW|yihW|AP_003924.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001034|IPR011991|IPR014036|IPR018356	DeoR C-terminal sensor domain|HTH DeoR N-terminal domain|Transcription regulator, HTH DeoR-type, conserved site|Winged helix-turn-helix DNA-binding domain	GO:0003700|GO:0005622|GO:0006355	G3DSA:1.10.10.10|G3DSA:3.40.50.1360|PF00455|PF08220|PR00037|PS00894|PS51000|PTHR30595|PTHR30595:SF0|SM00420|SSF100950|SSF46785
yihX|yihX|AP_003923.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR005833|IPR006402|IPR023198|IPR023214	HAD-like domain|HAD-superfamily hydrolase, subfamily IA, variant 3|Haloacid dehalogenase/epoxide hydrolase|Phosphoglycolate phosphatase, domain 2	GO:0008152|GO:0016787	G3DSA:1.10.150.240|G3DSA:3.40.50.1000|PF13419|PR00413|PTHR12725|PTHR12725:SF3|SSF56784|TIGR01509
yiiD|yiiD|AP_003920.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000182|IPR012660|IPR016181	Acyl-CoA N-acyltransferase|GNAT domain|Thioesterase, putative	GO:0008080	G3DSA:3.10.129.10|G3DSA:3.40.630.30|PF00583|PF09500|PS51186|PTHR10925|PTHR10925:SF21|SSF54637|SSF55729|TIGR02447
yiiE|yiiE|AP_003919.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002145	Ribbon-helix-helix protein, copG	GO:0006355	PF01402
yiiG|yiiG|AP_003912.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR024291	Protein of unknown function DUF3829		PF12889|PS51257
yiiL|yiiL|AP_003907.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR008000|IPR011008|IPR013448	Dimeric alpha-beta barrel|L-rhamnose 1-epimerase|Rhamnose mutarotase	GO:0005737|GO:0016857|GO:0019299	MF_01663|PF05336|SSF54909|TIGR02625
yiiM|yiiM|AP_003898.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR005163|IPR005302|IPR011037|IPR015808	3-alpha domain|Molybdenum cofactor sulfurase, C-terminal|Molybdenum cofactor sulfurase, C-terminal-like|Pyruvate kinase-like, insert domain	GO:0003824|GO:0030151|GO:0030170	G3DSA:2.40.33.20|PF03473|PF03475|PS51340|PTHR30212|SSF50800
yiiQ|yiiQ|AP_003889.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR009918	Protein of unknown function DUF1454		PF07305
yiiR|yiiR|AP_003888.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR008523	Lactobacillus phage LBR48, DUF805	GO:0016021	PF05656
yiiS|yiiS|AP_003887.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR005272	Conserved hypothetical protein CHP00743		G3DSA:3.30.70.860|PF04175|TIGR00743
yiiT|yiiT|AP_003886.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR006015|IPR006016|IPR014729	Rossmann-like alpha/beta/alpha sandwich fold|Universal stress protein A|UspA	GO:0006950	G3DSA:3.40.50.620|PF00582|PIRSF006276|SSF52402
yiiU|yiiU|AP_003881.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR009252	Cell division protein ZapB	GO:0000917|GO:0005737|GO:0043093	MF_01196|PF06005
yiiX|yiiX|AP_003872.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091				G3DSA:2.30.30.330|PF05708|SSF54001
yijD|yijD|AP_003846.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR009867	Protein of unknown function DUF1422		PD076479|PF07226
yijE|yijE|AP_003866.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000620	Drug/metabolite transporter	GO:0016020	PF00892|PTHR22911|SSF103481
yijF|yijF|AP_003865.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR009706	Protein of unknown function DUF1287		PD357862|PF06940|PIRSF011444
yijO|yijO|AP_003856.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR009057|IPR018060|IPR018062|IPR020449	DNA binding HTH domain, AraC-type|HTH domain AraC-type, conserved site|Homeodomain-like|Transcription regulator HTH, AraC- type	GO:0003677|GO:0003700|GO:0005622|GO:0006355|GO:0043565	G3DSA:1.10.10.60|PF00165|PR00032|PS00041|PS01124|PTHR11019|PTHR11019:SF25|SM00342|SSF46689
yijP|yijP|AP_003855.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000917|IPR012549|IPR017849|IPR017850	Alkaline phosphatase-like, alpha/beta/alpha|Alkaline-phosphatase-like, core domain|Domain of unknown function DUF1705|Sulfatase	GO:0003824|GO:0008152|GO:0008484|GO:0016021	G3DSA:3.40.720.10|PF00884|PF08019|PTHR30443|PTHR30443:SF0|SSF53649
yjaB|yjaB|AP_004513.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000182|IPR016181	Acyl-CoA N-acyltransferase|GNAT domain	GO:0008080	G3DSA:3.40.630.30|PF00583|PS51186|SSF55729
yjaG|yjaG|AP_003819.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR007338|IPR023381	Protein of unknown function DUF416|YP001051499.1-like domain		G3DSA:1.20.1590.10|PF04222
yjaH|yjaH|AP_003817.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR010858|IPR012640|IPR016500	Membrane lipoprotein, lipid attachment site|Protein of unknown function DUF1481|Uncharacterised conserved protein UCP006993		PF07356|PF08139|PIRSF006993
yjbA|yjbA|AP_004531.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR009315|IPR020948	Phosphate-starvation-induced PsiE|Phosphate-starvation-induced PsiE-like	GO:0016021|GO:0016036	MF_01048|PF06146|PIRSF029598
yjbB|yjbB|AP_004521.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003841|IPR004633	Na/Pi-cotransporter II-related/YqeW-like protein|Sodium-dependent phosphate transport protein	GO:0015321|GO:0016020|GO:0044341	PF02690|PTHR10010|PTHR10010:SF3|SSF109755|TIGR00704|TIGR01013
yjbC|yjbC|AP_004523.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000748|IPR002942|IPR006145|IPR018496|IPR020103	Pseudouridine synthase, RsuA/RluB/C/D/E/F|Pseudouridine synthase, RsuA/RluB/E/F|Pseudouridine synthase, RsuA/RluB/E/F, conserved site|Pseudouridine synthase, catalytic domain|RNA-binding S4 domain	GO:0001522|GO:0003723|GO:0009451|GO:0009982|GO:0016866	G3DSA:3.10.290.10|PF00849|PF01479|PS01149|PS50889|PTHR21600|PTHR21600:SF2|SM00363|SSF55120|SSF55174|TIGR00093
yjbD|yjbD|AP_004524.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR020317	Uncharacterised protein family YjbD		PD063639|PF11656
yjbE|yjbE|AP_004527.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR025858	Exopolysaccharide production protein YjbE		PF11106
yjbF|yjbF|AP_004528.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR021308|IPR023373	Protein of unknown function DUF2886|YmcC-like domain		G3DSA:2.40.360.10|PF11102|PS51257|SSF159270
yjbG|yjbG|AP_004529.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR010425	Domain of unknown function DUF1017		PF06251
yjbH|yjbH|AP_004530.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR010344	Protein of unknown function DUF940		PF06082|PS51257
yjbI|yjbI|AP_004539.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001646|IPR025726	E3 ubiquitin ligase SopA-like central domain|Pentapeptide repeat		PF13599|PF13981|SSF141571
yjbJ|yjbJ|AP_004546.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR008462|IPR026042	CsbD-like|Stress response protein YjbJ		G3DSA:1.10.1470.10|PF05532|PIRSF039008|SSF69047
yjbL|yjbL|AP_004548.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR020276	Uncharacterised protein family, YjbL		PD060861
yjbM|yjbM|AP_004549.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR020404	Protein of unknown function DUF2713		PF10897
yjbN|yjbN|AP_004550.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001269|IPR004653|IPR013785|IPR018517	Aldolase-type TIM barrel|tRNA-dihydrouridine synthase|tRNA-dihydrouridine synthase, TIM-barrel, YjbN|tRNA-dihydrouridine synthase, conserved site	GO:0003824|GO:0008033|GO:0016491|GO:0017150|GO:0050660|GO:0055114	G3DSA:3.20.20.70|PF01207|PIRSF006621|PS01136|PTHR11082|PTHR11082:SF20|SSF51395|TIGR00742
yjbO|yjbO|AP_004551.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR014318	Phage shock protein, PspG		PF09583|TIGR02975
yjbQ|yjbQ|AP_004557.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001602	Uncharacterised protein family UPF0047		G3DSA:2.60.120.460|PF01894|PIRSF004681|PS01314|PTHR30615|SSF111038|TIGR00149
yjbR|yjbR|AP_004558.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR007351	Protein of unknown function DUF419		PF04237|SSF142906
yjcB|yjcB|AP_004561.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR016958	Uncharacterised conserved protein UCP030798		PD064934|PIRSF030798
yjcC|yjcC|AP_004562.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001633|IPR024744	Diguanylate phosphodiesterase, EAL domain|Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain		G3DSA:3.20.20.450|PF00563|PF12792|PS50883|PTHR30394|PTHR30394:SF0|SM00052|SSF141868
yjcD|yjcD|AP_004565.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR006043	Xanthine/uracil/vitamin C permease	GO:0005215|GO:0006810|GO:0016020|GO:0055085	PF00860|PTHR11119|PTHR11119:SF9
yjcE|yjcE|AP_004566.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004705|IPR006153|IPR018422	Cation/H+ exchanger|Cation/H+ exchanger, CPA1 family|Cation/H+ exchanger, CPA1 family, bacteria	GO:0006812|GO:0015299|GO:0016021|GO:0055085	PF00999|PTHR10110|PTHR10110:SF7|TIGR00831
yjcF|yjcF|AP_004567.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001646	Pentapeptide repeat		PF00805|PTHR14136|PTHR14136:SF0|SSF141571
yjcH|yjcH|AP_004569.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR007436	Protein of unknown function DUF485		PF04341
yjcO|yjcO|AP_004579.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR006597|IPR011990	Sel1-like|Tetratricopeptide-like helical	GO:0005515	G3DSA:1.25.40.10|PF08238|PTHR11102|SM00671|SSF81901
yjcP|yjcP|AP_004581.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003423|IPR010131	Outer membrane efflux protein|RND efflux system, outer membrane lipoprotein, NodT	GO:0005215|GO:0006810|GO:0008289|GO:0016020	G3DSA:1.20.1600.10|G3DSA:2.20.200.10|PF02321|PS51257|PTHR30203|PTHR30203:SF0|SSF56954|TIGR01845
yjcQ|yjcQ|AP_004582.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR006726	Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein	GO:0005886|GO:0006810	PF04632
yjcR|yjcR|AP_004583.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR005694|IPR006143	Efflux pump membrane protein Emr|RND efflux pump, membrane fusion protein	GO:0006855|GO:0009276|GO:0015238|GO:0016020|GO:0055085	G3DSA:2.40.50.100|PF00529|PTHR30367|PTHR30367:SF0|SSF111369|TIGR00998
yjcS|yjcS|AP_004584.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001279|IPR003033	Beta-lactamase-like|SCP2 sterol-binding domain	GO:0016787|GO:0032934	G3DSA:3.30.1050.10|G3DSA:3.60.15.10|PF00753|PTHR30608|PTHR30608:SF0|SM00849|SSF55718|SSF56281
yjcZ|yjcZ|AP_004611.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR025599	YjcZ-like protein		PF13990
yjdA|yjdA|AP_004610.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001401|IPR027417	Dynamin, GTPase domain|P-loop containing nucleoside triphosphate hydrolase	GO:0003924|GO:0005525	G3DSA:3.40.50.300|PF00350|SSF52540
yjdC|yjdC|AP_004636.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001647|IPR009057|IPR011075|IPR015893	DNA-binding HTH domain, TetR-type|Homeodomain-like|Tetracycline transcriptional regulator, TetR-like, C-terminal|Tetracycline transcriptional regulator, TetR-related, C-terminal	GO:0003677	G3DSA:1.10.357.10|PF00440|PS50977|SSF46689|SSF48498
yjdF|yjdF|AP_004622.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR014509	Uncharacterised conserved protein UCP020606		PF09997|PIRSF020606
yjdI|yjdI|AP_004627.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR010693	Ferredoxin soy-like		PF06902
yjdJ|yjdJ|AP_004628.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000182|IPR016181	Acyl-CoA N-acyltransferase|GNAT domain	GO:0008080	G3DSA:3.40.630.30|PF00583|PS51186|SSF55729
yjdK|yjdK|AP_004629.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR022597	Protein of unknown function DUF2622		PF11080
yjdL|yjdL|AP_004632.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000109|IPR005279|IPR016196|IPR018456|IPR020846	Amino acid/peptide transporter family|Major facilitator superfamily domain|Major facilitator superfamily domain, general substrate transporter|PTR2 family proton/oligopeptide symporter, conserved site|Proton-dependent oligopeptide transporter family	GO:0005215|GO:0006810|GO:0006857|GO:0015197|GO:0015833|GO:0016020	G3DSA:1.20.1250.20|PF00854|PS01022|PS01023|PS50850|PTHR11654|PTHR11654:SF6|SSF103473|TIGR00924
yjdO|yjdO|AP_004630.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR019689	Pseudomonas phage PaP3, Orf56		PF10753
yjdP|yjdP|AP_004593.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091				
yjeB|yjeB|AP_004678.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000944|IPR011991|IPR023761	Transcription regulator Rrf2-like|Transcriptional repressor HTH, NsrR|Winged helix-turn-helix DNA-binding domain	GO:0045892	G3DSA:1.10.10.10|MF_01177|PF02082|PS01332|PS51197|SSF46785|TIGR00738
yjeE|yjeE|AP_004668.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003442|IPR027417	P-loop containing nucleoside triphosphate hydrolase|tRNA threonylcarbamoyl adenosine modification protein YjeE	GO:0070526	G3DSA:3.40.50.300|PF02367|SSF52540|TIGR00150
yjeF|yjeF|AP_004667.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000631|IPR004443|IPR017953|IPR026599|IPR026600	ADP/ATP-dependent (S)-NAD(P)H-hydrate dehydratase|Carbohydrate kinase, predicted, conserved site|NAD(P)H-hydrate epimerase|YjeF C-terminal domain, carbohydrate kinase-related|YjeF N-terminal domain		G3DSA:3.40.1190.20|G3DSA:3.40.50.10260|MF_01965|MF_01966|PF01256|PF03853|PS01049|PS01050|PS51383|PS51385|PTHR12592|PTHR12592:SF0|SSF53613|SSF64153|TIGR00196|TIGR00197
yjeH|yjeH|AP_004642.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002293	Amino acid/polyamine transporter I	GO:0003333|GO:0015171|GO:0016020	PF13520|PIRSF006060|PTHR11785|PTHR11785:SF128
yjeI|yjeI|AP_004645.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR025294	Protein of unknown function DUF4156		PF13698|PS51257
yjeK|yjeK|AP_004647.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003739|IPR007197|IPR013785|IPR022462	Aldolase-type TIM barrel|Lysine-2,3-aminomutase family|Lysine-2,3-aminomutase-like|Radical SAM	GO:0003824|GO:0051536	G3DSA:3.20.20.70|PF04055|PF13394|PIRSF004911|PTHR30538|PTHR30538:SF0|SSF102114|TIGR00238|TIGR03821
yjeM|yjeM|AP_004659.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002293	Amino acid/polyamine transporter I	GO:0003333|GO:0015171|GO:0016020	PF13520|PIRSF006060|PTHR11785|PTHR11785:SF92
yjeN|yjeN|AP_004660.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR020528	Uncharacterised protein family YjeN		PD069398
yjeO|yjeO|AP_004661.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR022553	Protein of unknown function DUF2645		PD069399|PF10840
yjeP|yjeP|AP_004662.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR006685|IPR010920|IPR011014|IPR011066|IPR025692	Like-Sm (LSM) domain|Mechanosensitive ion channel MscS|Mechanosensitive ion channel MscS, C-terminal|Mechanosensitive ion channel MscS, transmembrane-2|Mechanosensitive ion channel inner membrane domain 1	GO:0016020|GO:0055085	G3DSA:2.30.30.60|G3DSA:3.30.70.100|PF00924|PF12794|PF12795|PTHR30347|PTHR30347:SF1|SSF50182|SSF82689|SSF82861
yjeS|yjeS|AP_004666.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004453|IPR009051|IPR013542|IPR017896|IPR017900	4Fe-4S ferredoxin, iron-sulphur binding, conserved site|4Fe-4S ferredoxin-type, iron-sulpur binding domain|Alpha-helical ferredoxin|Domain of unknown function DUF1730|Epoxyqueuosine reductase-QueG	GO:0005737|GO:0008033|GO:0008616|GO:0016491|GO:0051536	G3DSA:3.30.70.20|MF_00916|PF08331|PF13484|PS00198|PS51379|PTHR30002|PTHR30002:SF0|SSF46548|TIGR00276
yjeT|yjeT|AP_004676.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR019201	Protein of unknown function DUF2065		PF09838
yjfC|yjfC|AP_004686.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR005494|IPR016185	Glutathionylspermidine synthase, pre-ATP-grasp-like domain|Pre-ATP-grasp domain		PF03738|PTHR30094|PTHR30094:SF0|SSF52440|SSF56059
yjfF|yjfF|AP_004730.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001851	ABC transporter, permease	GO:0005215|GO:0006810|GO:0016020	PF02653|PTHR32196|PTHR32196:SF0
yjfI|yjfI|AP_004681.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR019231	Protein of unknown function DUF2170		PF09938
yjfJ|yjfJ|AP_004682.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR007157	PspA/IM30		PF04012
yjfK|yjfK|AP_004683.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR019621	Protein of unknown function DUF2491		PF10679
yjfL|yjfL|AP_004684.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR007140	Protein of unknown function DUF350		PF03994
yjfM|yjfM|AP_004685.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR009576	Biofilm formation YgiB		PF06693
yjfN|yjfN|AP_004688.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR010854|IPR025543	Dodecin-like|Domain of unknown function DUF1471		G3DSA:3.30.1660.10|PF07338|SSF159871
yjfO|yjfO|AP_004689.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR010854|IPR025543	Dodecin-like|Domain of unknown function DUF1471		G3DSA:3.30.1660.10|PF07338|PS51257|SSF159871
yjfP|yjfP|AP_004690.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091				G3DSA:3.40.50.1820|PF12695|PTHR11731|SSF53474
yjfY|yjfY|AP_004699.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR010854|IPR025543	Dodecin-like|Domain of unknown function DUF1471		G3DSA:3.30.1660.10|PF07338|SSF159871
yjfZ|yjfZ|AP_004704.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR021220	Protein of unknown function DUF2686		PF10887
yjgA|yjgA|AP_004733.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR006839|IPR023153	PSPTO4464-like domain|Ribosome-associated, YjgA		G3DSA:1.10.60.30|MF_00765|PF04751|PIRSF016183|SSF158710
yjgB|yjgB|AP_004765.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002085|IPR002328|IPR006140|IPR011032|IPR013149|IPR013154|IPR016040	Alcohol dehydrogenase GroES-like|Alcohol dehydrogenase superfamily, zinc-type|Alcohol dehydrogenase, C-terminal|Alcohol dehydrogenase, zinc-type, conserved site|D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding|GroES-like|NAD(P)-binding domain	GO:0008270|GO:0016491|GO:0016616|GO:0048037|GO:0055114	G3DSA:3.40.50.720|G3DSA:3.90.180.10|PF00107|PF08240|PS00059|PS00065|PTHR11695|PTHR11695:SF261|SSF50129|SSF51735
yjgD|yjgD|AP_004751.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR009671|IPR016716	Domain of unknown function DUF1260|Regulator of ribonuclease activity B		G3DSA:3.30.70.970|MF_01888|PF06877|PIRSF018193|SSF89946
yjgF|yjgF|AP_004741.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR006056|IPR006175|IPR013813|IPR019897	Enamine/imine deaminase YjgF-like|Endoribonuclease L-PSP/chorismate mutase-like|YjgF-like protein, conserved site|YjgF/Yer057p/UK114 family	GO:0019239	G3DSA:3.30.1330.40|PF01042|PS01094|PTHR11803|SSF55298|TIGR00004
yjgH|yjgH|AP_004745.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR006175|IPR013813	Endoribonuclease L-PSP/chorismate mutase-like|YjgF/Yer057p/UK114 family		G3DSA:3.30.1330.40|PF01042|PTHR11803|SSF55298
yjgI|yjgI|AP_004746.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002198|IPR002347|IPR016040|IPR020904	Glucose/ribitol dehydrogenase|NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR|Short-chain dehydrogenase/reductase, conserved site	GO:0008152|GO:0016491	G3DSA:3.40.50.720|PF00106|PR00080|PR00081|PS00061|PTHR24322|SSF51735
yjgJ|yjgJ|AP_004747.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001647|IPR009057|IPR011075|IPR015893|IPR023772	DNA-binding HTH domain, TetR-type|DNA-binding HTH domain, TetR-type, conserved site|Homeodomain-like|Tetracycline transcriptional regulator, TetR-like, C-terminal|Tetracycline transcriptional regulator, TetR-related, C-terminal	GO:0003677	G3DSA:1.10.10.60|G3DSA:1.10.357.10|PF00440|PS01081|PS50977|SSF46689|SSF48498
yjgK|yjgK|AP_004748.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004375	Conserved hypothetical protein CHP00022		G3DSA:2.60.120.370|PF04074|SSF51197|TIGR00022
yjgL|yjgL|AP_004749.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091				
yjgM|yjgM|AP_004752.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000182|IPR016181	Acyl-CoA N-acyltransferase|GNAT domain	GO:0008080	G3DSA:3.40.630.30|PF00583|PS51186|PTHR13947|SSF55729
yjgN|yjgN|AP_004753.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR010295	Protein of unknown function DUF898		PF05987|PTHR30080
yjgP|yjgP|AP_004757.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR005495	Permease YjgP/YjgQ, predicted	GO:0016021	PF03739
yjgQ|yjgQ|AP_004758.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR005495	Permease YjgP/YjgQ, predicted	GO:0016021	PF03739
yjgR|yjgR|AP_004759.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR008571|IPR027417	P-loop containing nucleoside triphosphate hydrolase|Protein of unknown function DUF853, nucleotide triphosphate hydrolase, putative		G3DSA:3.40.50.300|PF05872|PTHR30121|SSF52540
yjgZ|yjgZ|AP_004770.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091				PF13817
yjhA|yjhA|AP_004803.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR009331	Oligogalacturonate-specific porin		G3DSA:2.40.230.30|PF06178
yjhB|yjhB|AP_004772.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR005828|IPR016196|IPR020846	General substrate transporter|Major facilitator superfamily domain|Major facilitator superfamily domain, general substrate transporter	GO:0016021|GO:0022857|GO:0055085	G3DSA:1.20.1250.20|PF00083|PS50850|PTHR24003|SSF103473
yjhC|yjhC|AP_004773.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000683|IPR004104|IPR016040	NAD(P)-binding domain|Oxidoreductase, C-terminal|Oxidoreductase, N-terminal	GO:0008152|GO:0016491|GO:0055114	G3DSA:3.30.360.10|G3DSA:3.40.50.720|PF01408|PF02894|PTHR22604|PTHR22604:SF14|SSF51735|SSF55347
yjhF|yjhF|AP_004786.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003474	Gluconate transporter	GO:0015128|GO:0016020|GO:0035429	PF02447|PIRSF002746|PTHR30354|TIGR00791
yjhG|yjhG|AP_004787.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000581|IPR015928|IPR017798|IPR020558	Aconitase/3-isopropylmalate dehydratase, swivel|Dehydratase, YjhG/YagF, putative|Dihydroxy-acid/6-phosphogluconate dehydratase|Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site	GO:0003824|GO:0008152	PF00920|PS00886|PS00887|PTHR21000|SSF143975|SSF52016|TIGR03432
yjhH|yjhH|AP_004788.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002220|IPR013785|IPR020624|IPR020625	Aldolase-type TIM barrel|Dihydrodipicolinate synthetase, active site|Dihydrodipicolinate synthetase, conserved site|Dihydrodipicolinate synthetase-like	GO:0003824|GO:0008152|GO:0016829	G3DSA:3.20.20.70|PF00701|PIRSF001365|PR00146|PS00665|PS00666|PTHR12128|PTHR12128:SF10|SSF51569
yjhI|yjhI|AP_004789.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR005471|IPR011991|IPR014757	Transcription regulator IclR, C-terminal|Transcription regulator IclR, N-terminal|Winged helix-turn-helix DNA-binding domain	GO:0003677|GO:0006355	G3DSA:1.10.10.10|G3DSA:3.30.450.40|PF01614|PS51077|PS51078|PTHR30136|PTHR30136:SF0|SM00346|SSF46785|SSF55781
yjhP|yjhP|AP_004797.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR017031	Predicted S-adenosyl-L-methionine dependent methyltransferase, YjhP-type		G3DSA:3.40.50.150|PF12847|PIRSF034653|PTHR10108|PTHR10108:SF129|SSF53335
yjhQ|yjhQ|AP_004798.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000182|IPR016181	Acyl-CoA N-acyltransferase|GNAT domain	GO:0008080	G3DSA:3.40.630.30|PF00583|PS51186|SSF55729
yjhR|yjhR|AP_004800.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001736|IPR027417	P-loop containing nucleoside triphosphate hydrolase|Phospholipase D/Transphosphatidylase	GO:0003824|GO:0008152	G3DSA:3.30.870.10|PF00614|PF13087|PS50035|PTHR10887|PTHR10887:SF56|SSF52540|SSF56024
yjhS|yjhS|AP_004801.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR005181	Domain of unknown function DUF303, acetylesterase putative		PF03629|SSF52266
yjhT|yjhT|AP_004802.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR015915|IPR019936	Kelch-type beta propeller|Mutatrotase, YjhT-like	GO:0005515	G3DSA:2.120.10.80|MF_01195|PF13418|PTHR23244|PTHR23244:SF156|SSF117281|TIGR03547
yjhU|yjhU|AP_004785.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR007324|IPR011991|IPR013324	RNA polymerase sigma factor, region 3/4|Sugar-binding domain, putative|Winged helix-turn-helix DNA-binding domain	GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987|GO:0030246	G3DSA:1.10.10.10|G3DSA:3.40.50.1360|PF04198|PTHR32101|PTHR32101:SF1|SSF100950|SSF88659
yjhV|yjhV|AP_004776.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR016040	NAD(P)-binding domain		G3DSA:3.40.50.720
yjhX|yjhX|AP_004799.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR018654	Protein of unknown function DUF2084		MF_00827|PF09857
yjiA|yjiA|AP_004841.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003495|IPR011629|IPR027417	CobW/HypB/UreG domain|Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal|P-loop containing nucleoside triphosphate hydrolase		G3DSA:3.30.1220.10|G3DSA:3.40.50.300|PF02492|PF07683|PTHR13748|PTHR13748:SF9|SM00833|SSF52540|SSF90002
yjiC|yjiC|AP_004817.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR021220	Protein of unknown function DUF2686		PF10887
yjiD|yjiD|AP_004818.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR007048|IPR023776	Anti-adapter protein, IraD|GpW/Gp25/anti-adapter protein IraD	GO:0006974|GO:0043856	MF_02010|PF04965|SSF160719
yjiE|yjiE|AP_004819.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000847|IPR005119|IPR011991	LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain	GO:0003700|GO:0006355	G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PR00039|PS50931|PTHR30126|SSF46785|SSF53850
yjiG|yjiG|AP_004821.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR011642	Nucleoside recognition Gate	GO:0001882	PF07670
yjiH|yjiH|AP_004822.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR011642	Nucleoside recognition Gate	GO:0001882	PF07670
yjiJ|yjiJ|AP_004824.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR010645|IPR016196	Domain of unknown function DUF1228|Major facilitator superfamily domain, general substrate transporter		G3DSA:1.20.1250.20|PF06779|PTHR24003|PTHR24003:SF89|SSF103473
yjiK|yjiK|AP_004825.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR009722|IPR011042	SdiA-regulated|Six-bladed beta-propeller, TolB-like		G3DSA:2.120.10.30|PF06977|SSF50956
yjiL|yjiL|AP_004826.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002731|IPR008275	ATPase, BadF/BadG/BcrA/BcrD type|CoA enzyme activase		G3DSA:3.30.420.40|PF01869|PTHR32329|SSF53067|TIGR00241
yjiM|yjiM|AP_004827.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR010327	2-hydroxyglutaryl-CoA dehydratase, D-component		PF06050|PTHR30548|PTHR30548:SF0
yjiN|yjiN|AP_004828.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR007383	Protein of unknown function DUF445, transmembrane		PF04286|PTHR30122|PTHR30122:SF0
yjiO|yjiO|AP_004829.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR005829|IPR011701|IPR016196|IPR020846	Major facilitator superfamily|Major facilitator superfamily domain|Major facilitator superfamily domain, general substrate transporter|Sugar transporter, conserved site	GO:0005215|GO:0006810|GO:0016020|GO:0016021|GO:0055085	G3DSA:1.20.1250.20|PF07690|PS00216|PS50850|PTHR24003|SSF103473
yjiQ|yjiQ|AP_004830.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR006842|IPR010106	Conserved hypothetical protein CHP01784|Transposase (putative), YhgA-like		PF04754|TIGR01784
yjiR|yjiR|AP_004831.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000524|IPR004839|IPR011991|IPR015421|IPR015422|IPR015424	Aminotransferase, class I/classII|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2|Transcription regulator HTH, GntR|Winged helix-turn-helix DNA-binding domain	GO:0003700|GO:0003824|GO:0005622|GO:0006355|GO:0009058|GO:0030170	G3DSA:1.10.10.10|G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF00155|PF00392|PS50949|PTHR11751|PTHR11751:SF18|SM00345|SSF46785|SSF53383
yjiS|yjiS|AP_004832.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR009506	Protein of unknown function DUF1127		PF06568
yjiT|yjiT|AP_004833.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091				PD144061
yjiW|yjiW|AP_004836.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR014944	Toxin SymE-like	GO:0003723|GO:0005737|GO:0016070|GO:0016788	PF08845
yjiX|yjiX|AP_004842.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR007423	Protein of unknown function DUF466		PF04328
yjiY|yjiY|AP_004843.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003706|IPR025299	Carbon starvation protein CstA|CstA C-terminal domain	GO:0009267|GO:0016020	PF02554|PF13722|PTHR30252|PTHR30252:SF0
yjiZ|yjiZ|AP_004845.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR011701|IPR016196|IPR020846	Major facilitator superfamily|Major facilitator superfamily domain|Major facilitator superfamily domain, general substrate transporter	GO:0016021|GO:0055085	G3DSA:1.20.1250.20|PF07690|PS50850|PTHR11662|PTHR11662:SF18|SSF103473
yjjA|yjjA|AP_004849.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR019637	Protein of unknown function DUF2501		PF10696
yjjB|yjjB|AP_004852.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR024528	Domain of unknown function DUF3815		PF12821
yjjG|yjjG|AP_004861.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR006402|IPR006439|IPR011951|IPR023198|IPR023214	HAD-like domain|HAD-superfamily hydrolase, subfamily IA, YjjG/YfnB|HAD-superfamily hydrolase, subfamily IA, variant 1|HAD-superfamily hydrolase, subfamily IA, variant 3|Phosphoglycolate phosphatase, domain 2	GO:0008152|GO:0008967|GO:0016787	G3DSA:1.10.150.240|G3DSA:3.40.50.1000|PF00702|PTHR12725|PTHR12725:SF11|SSF56784|TIGR01509|TIGR01549|TIGR02254
yjjI|yjjI|AP_004868.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR016905	Glycyl radical enzyme, HI0521, predicted		G3DSA:3.20.70.20|PF11230|PIRSF028991|SSF51998|TIGR04040
yjjJ|yjjJ|AP_004873.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR012893|IPR012894	HipA-like, C-terminal|HipA-like, N-terminal		PF07804|PF07805
yjjK|yjjK|AP_004879.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003439|IPR003593|IPR017871|IPR022374|IPR027417	AAA+ ATPase domain|ABC transporter, ATP-binding protein, ChvD|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase	GO:0000166|GO:0005524|GO:0016887|GO:0017111	G3DSA:3.40.50.300|PF00005|PF12848|PS00211|PS50893|PTHR19211|PTHR19211:SF7|SM00382|SSF52540|TIGR03719
yjjM|yjjM|AP_004846.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000524|IPR008920|IPR011711|IPR011991|IPR027376	FadR/GntR C-terminal domain|Fatty acid responsive transcription factor FadR, C-terminal|GntR, C-terminal|Transcription regulator HTH, GntR|Winged helix-turn-helix DNA-binding domain	GO:0000062|GO:0003677|GO:0003700|GO:0005622|GO:0006355|GO:0019217	G3DSA:1.10.10.10|G3DSA:1.20.120.530|PF00392|PF07729|PR00035|SM00895|SSF46785|SSF48008
yjjN|yjjN|AP_004847.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002085|IPR002328|IPR011032|IPR013149|IPR013154|IPR016040	Alcohol dehydrogenase GroES-like|Alcohol dehydrogenase superfamily, zinc-type|Alcohol dehydrogenase, C-terminal|Alcohol dehydrogenase, zinc-type, conserved site|GroES-like|NAD(P)-binding domain	GO:0008270|GO:0016491|GO:0055114	G3DSA:3.40.50.720|G3DSA:3.90.180.10|PF00107|PF08240|PS00059|PTHR11695|PTHR11695:SF38|SSF50129|SSF51735
yjjP|yjjP|AP_004853.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR010619	Domain of unknown function DUF1212		PF06738
yjjQ|yjjQ|AP_004854.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000792|IPR011991|IPR016032	Signal transduction response regulator, C-terminal effector|Transcription regulator LuxR, C-terminal|Winged helix-turn-helix DNA-binding domain	GO:0003677|GO:0003700|GO:0005622|GO:0006355|GO:0043565	G3DSA:1.10.10.10|PF00196|PS50043|SM00421|SSF46894
yjjU|yjjU|AP_004865.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002641|IPR016035	Acyl transferase/acyl hydrolase/lysophospholipase|Patatin/Phospholipase A2-related	GO:0006629|GO:0008152	G3DSA:3.40.1090.10|PF01734|SSF52151
yjjV|yjjV|AP_004866.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001130|IPR018228	Deoxyribonuclease, TatD-related, conserved site|TatD family	GO:0016888	G3DSA:3.20.20.140|PF01026|PIRSF005902|PS01090|PS01091|PS01137|PTHR10060|PTHR10060:SF9|SSF51556
yjjW|yjjW|AP_004867.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001450|IPR001989|IPR007197|IPR012839|IPR017896|IPR017900|IPR023912	4Fe-4S binding domain|4Fe-4S ferredoxin, iron-sulphur binding, conserved site|4Fe-4S ferredoxin-type, iron-sulpur binding domain|Glycyl radical enzyme activase|Glycyl radical enzyme activase, YjjW, bact|Radical SAM|Radical-activating enzyme, conserved site	GO:0003824|GO:0005737|GO:0006006|GO:0009055|GO:0016491|GO:0051536|GO:0051539|GO:0055114	G3DSA:3.30.70.20|G3DSA:3.80.30.10|PF00037|PF04055|PIRSF000371|PS00198|PS01087|PS51379|PTHR30352|SSF102114|SSF54862|TIGR04041
yjjX|yjjX|AP_004882.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002786|IPR026533	Non-canonical purine NTP phosphatase|Non-canonical purine NTP phosphatase/PRRC1		G3DSA:3.90.950.10|MF_00648|PF01931|SSF52972|TIGR00258
yjjZ|yjjZ|AP_004857.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR009885	Protein of unknown function DUF1435		PD058594|PF07256
yjtD|yjtD|AP_004891.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001537|IPR004384	RNA methyltransferase TrmH, group 1|tRNA/rRNA methyltransferase, SpoU	GO:0003723|GO:0006396|GO:0008173	G3DSA:3.40.1280.10|PF00588|PIRSF004808|PTHR12029|PTHR12029:SF37|SSF75217|TIGR00050
ykfA|ykfA|AP_000906.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR006073|IPR027417	GTP binding domain|P-loop containing nucleoside triphosphate hydrolase	GO:0005525	G3DSA:3.40.50.300|PF01926|PTHR11649|PTHR11649:SF41|SSF52540
ykfB|ykfB|AP_000903.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091				PD034160
ykfC|ykfC|AP_000911.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000477	Reverse transcriptase	GO:0003723|GO:0003964|GO:0006278	PF00078|PS50878|PTHR19446|PTHR19446:SF229|SSF56672
ykfF|ykfF|AP_000902.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR009253|IPR015146	Protein of unknown function DUF905|Ribonucleotide reductase, stirrup	GO:0016788	G3DSA:3.30.160.130|PD028015|PF06006|SSF54786
ykfG|ykfG|AP_000900.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001405|IPR020891|IPR025657	RadC protein|RadC-like JAB domain|Uncharacterised protein family UPF0758, conserved site		G3DSA:3.40.140.10|PF04002|PS01302|PTHR30471|PTHR30471:SF0|SSF102712|TIGR00608
ykfH|ykfH|AP_000899.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR009329	Protein of unknown function DUF987		PD056719|PF06174
ykfI|ykfI|AP_000897.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR009610	Protein of unknown function DUF1219		PF06755
ykfJ|ykfJ|AP_000888.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001233	RtcB family		PF01139|SSF103365
ykgA|ykgA|AP_000955.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR009057|IPR011256|IPR018060|IPR020449	DNA binding HTH domain, AraC-type|Homeodomain-like|Regulatory factor, effector, bacterial|Transcription regulator HTH, AraC- type	GO:0003677|GO:0003700|GO:0005622|GO:0006355|GO:0043565	G3DSA:1.10.10.60|G3DSA:3.20.80.10|PF12833|PR00032|PS01124|PTHR24792|PTHR24792:SF1|SM00342|SSF46689|SSF55136
ykgB|ykgB|AP_000956.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR007339	Protein of unknown function DUF417		PF04224
ykgC|ykgC|AP_000958.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001327|IPR004099|IPR012999|IPR013027|IPR016156|IPR023753	FAD-dependent pyridine nucleotide-disulphide oxidoreductase|FAD/NAD-linked reductase, dimerisation|Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain|Pyridine nucleotide-disulphide oxidoreductase, NAD-binding domain|Pyridine nucleotide-disulphide oxidoreductase, class I, active site|Pyridine nucleotide-disulphide oxidoreductase, dimerisation	GO:0005737|GO:0016491|GO:0016668|GO:0045454|GO:0050660|GO:0055114	G3DSA:3.30.390.30|G3DSA:3.50.50.60|PF00070|PF02852|PF07992|PR00368|PR00411|PS00076|PTHR22912|PTHR22912:SF71|SSF51905|SSF55424
ykgD|ykgD|AP_000959.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR009057|IPR011051|IPR014710|IPR018060|IPR020449	DNA binding HTH domain, AraC-type|Homeodomain-like|RmlC-like cupin domain|RmlC-like jelly roll fold|Transcription regulator HTH, AraC- type	GO:0003677|GO:0003700|GO:0005622|GO:0006355|GO:0043565	G3DSA:1.10.10.60|G3DSA:2.60.120.10|PF12833|PF12852|PR00032|PS01124|PTHR11019|PTHR11019:SF11|SM00342|SSF46689|SSF51182
ykgE|ykgE|AP_000960.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004017	Cysteine-rich domain		PF02754|PTHR30296|PTHR30296:SF0
ykgF|ykgF|AP_000961.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003741|IPR004452|IPR009051|IPR012285|IPR017896|IPR017900|IPR024185|IPR024569	4Fe-4S binding protein|4Fe-4S binding protein, C-terminal|4Fe-4S ferredoxin, iron-sulphur binding, conserved site|4Fe-4S ferredoxin-type, iron-sulpur binding domain|5-formyltetrahydrofolate cyclo-ligase-like domain|Alpha-helical ferredoxin|Domain of unknown function DUF162|Fumarate reductase, C-terminal	GO:0016491|GO:0019516|GO:0051536|GO:0055114	G3DSA:1.10.1060.10|G3DSA:3.40.50.10420|PF02589|PF11870|PF13183|PS00198|PS51379|PTHR32479|PTHR32479:SF0|SSF100950|SSF46548|TIGR00273
ykgG|ykgG|AP_000962.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003741|IPR024185	5-formyltetrahydrofolate cyclo-ligase-like domain|Domain of unknown function DUF162		G3DSA:3.40.50.10420|PF02589|SSF100950
ykgH|ykgH|AP_000963.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091				PF13807
ykgI|ykgI|AP_000957.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR010854|IPR025543	Dodecin-like|Domain of unknown function DUF1471		G3DSA:3.30.1660.10|PF07338|SSF159871
ykgJ|ykgJ|AP_000942.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR005358	Uncharacterised protein family UPF0153		PF03692
ykgK|ykgK|AP_000948.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000792|IPR011991|IPR016032	Signal transduction response regulator, C-terminal effector|Transcription regulator LuxR, C-terminal|Winged helix-turn-helix DNA-binding domain	GO:0003677|GO:0003700|GO:0005622|GO:0006355|GO:0043565	G3DSA:1.10.10.10|PD116027|PF00196|PR00038|PS50043|SM00421|SSF46894
ykgM|ykgM|AP_000950.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000473	Ribosomal protein L36	GO:0003735|GO:0005622|GO:0005840|GO:0006412	MF_00251|PF00444|PS00828|PTHR18804|PTHR18804:SF7|SSF57840|TIGR01022
ykgM|ykgM|AP_000951.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002150|IPR027493	Ribosomal protein L31|Ribosomal protein L31 type B	GO:0003735|GO:0005622|GO:0005840|GO:0006412	MF_00502|PF01197|PR01249|PS01143|SSF143800|TIGR00105
ykgN|ykgN|AP_000919.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002514|IPR009057	Homeodomain-like|Transposase IS3/IS911family	GO:0003677|GO:0004803|GO:0006313	G3DSA:1.10.10.60|PF01527|SSF46689
ykiA|ykiA|AP_001043.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR024497	Protein of unknown function DUF2773		PD029376|PF10971
ylaB|ylaB|AP_001106.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001633|IPR024744	Diguanylate phosphodiesterase, EAL domain|Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain		G3DSA:3.20.20.450|PF00563|PF12792|PS50883|PTHR30394|PTHR30394:SF0|SM00052|SSF141868
ylaC|ylaC|AP_001107.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR019713	Inner membrane protein YlaC		PF10777
ylbA|ylbA|AP_001163.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR008579|IPR011051|IPR013096|IPR014710|IPR017627	Conserved hypothetical protein CHP03214, putative allantoin-urate catabolism protein|Cupin 2, conserved barrel|Domain of unknown function DUF861, cupin-3|RmlC-like cupin domain|RmlC-like jelly roll fold		G3DSA:2.60.120.10|PF05899|PF07883|SSF51182|TIGR03214
ylbF|ylbF|AP_001167.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR021530	Protein of unknown function DUF2877		PF11392
ylbG|ylbG|AP_001150.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR009057|IPR027049	Homeodomain-like|Uncharacterised protein YlbG	GO:0003677	PF13551|PTHR24894|PTHR24894:SF15|SSF46689
ylbH|ylbH|AP_001148.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001826|IPR022385	RHS protein|Rhs repeat-associated core		PF03527|PR00394|PTHR32305|PTHR32305:SF2|TIGR03696
ylcE|ylcE|AP_001208.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003458	Bacteriophage T4, Gp38, tail fibre assembly		PF02413
ylcG|ylcG|AP_001196.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091				PD026569
yliA|yliA|AP_001460.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003439|IPR003593|IPR013563|IPR017871|IPR027417	AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|Oligopeptide/dipeptide ABC transporter, C-terminal|P-loop containing nucleoside triphosphate hydrolase	GO:0000166|GO:0005524|GO:0015833|GO:0016887|GO:0017111	G3DSA:3.40.50.300|PF00005|PF08352|PS00211|PS50893|PTHR24220|PTHR24220:SF132|SM00382|SSF52540
yliB|yliB|AP_001461.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000914|IPR023765	Bacterial extracellular solute-binding protein, family 5|Bacterial extracellular solute-binding protein, family 5, conserved site	GO:0005215|GO:0006810	G3DSA:3.10.105.10|G3DSA:3.40.190.10|PF00496|PIRSF002741|PS01040|PS51257|PTHR30290|PTHR30290:SF0|SSF53850
yliC|yliC|AP_001462.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000515	Binding-protein-dependent transport systems inner membrane component	GO:0005215|GO:0006810|GO:0016020	G3DSA:1.10.3720.10|PF00528|PS50928|PTHR30465|PTHR30465:SF5|SSF161098
yliD|yliD|AP_001463.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000515|IPR025966	Binding-protein-dependent transport systems inner membrane component|Oligopeptide transport permease C-like, N-terminal domain	GO:0005215|GO:0006810|GO:0016020	G3DSA:1.10.3720.10|PF00528|PF12911|PS50928|PTHR30465|PTHR30465:SF1|SSF161098
yliE|yliE|AP_001464.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001633	Diguanylate phosphodiesterase, EAL domain		G3DSA:3.20.20.450|PF00563|PS50883|PTHR30394|PTHR30394:SF0|SM00052|SSF141868
yliF|yliF|AP_001465.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000160|IPR001054	Adenylyl cyclase class-3/4/guanylyl cyclase|GGDEF domain	GO:0009190|GO:0016849|GO:0035556	G3DSA:3.30.70.270|PF00990|PS50887|PS51257|SM00267|SSF55073|TIGR00254
yliG|yliG|AP_001466.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002792|IPR005839|IPR005840|IPR006638|IPR007197|IPR012340|IPR013848|IPR020612|IPR023404|IPR023970	Elongator protein 3/MiaB/NifB|Methylthiotransferase|Methylthiotransferase, N-terminal|Methylthiotransferase, conserved site|Methylthiotransferase/radical SAM-type protein|Nucleic acid-binding, OB-fold|Radical SAM|Radical SAM, alpha/beta horseshoe|Ribosomal protein S12 methylthiotransferase RimO|TRAM domain	GO:0003824|GO:0005737|GO:0009451|GO:0016740|GO:0018339|GO:0043412|GO:0051536|GO:0051539	G3DSA:2.40.50.140|G3DSA:3.80.30.20|MF_01865|PF00919|PF04055|PS01278|PS50926|PS51449|PTHR11918|PTHR11918:SF41|SM00729|SSF102114|TIGR00089|TIGR01125
yliH|yliH|AP_001467.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR020359	Biofilm regulator BssR		PD079626|PF10799
yliI|yliI|AP_001468.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR011041|IPR011042|IPR012938	Glucose/Sorbosone dehydrogenase|Six-bladed beta-propeller, TolB-like|Soluble quinoprotein glucose/sorbosone dehydrogenase	GO:0003824|GO:0005975|GO:0016901|GO:0048038	G3DSA:2.120.10.30|PF07995|PTHR19328|PTHR19328:SF2|SSF50952
yliJ|yliJ|AP_001469.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004046|IPR010987|IPR012336	Glutathione S-transferase, C-terminal|Glutathione S-transferase, C-terminal-like|Thioredoxin-like fold		G3DSA:1.20.1050.10|G3DSA:3.40.30.10|PF00043|PF13417|PTHR11260|SSF47616|SSF52833
yliK|yliK|AP_003475.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR006098|IPR006099|IPR006158|IPR006159|IPR014348|IPR016176	Cobalamin (vitamin B12)-binding domain|Cobalamin (vitamin B12)-dependent enzyme, catalytic|Cobalamin (vitamin B12)-dependent enzyme, catalytic subdomain|Methylmalonyl-CoA mutase, C-terminal|Methylmalonyl-CoA mutase, alpha chain, catalytic|Methylmalonyl-CoA mutase, alpha/beta chain, catalytic	GO:0003824|GO:0004494|GO:0008152|GO:0016853|GO:0016866|GO:0031419|GO:0046872	G3DSA:3.20.20.240|G3DSA:3.40.50.280|PF01642|PF02310|PS00544|PS51332|PTHR23408|PTHR23408:SF1|SSF51703|SSF52242|TIGR00640|TIGR00641
ymbA|ymbA|AP_001582.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR005586	Protein of unknown function DUF330		G3DSA:3.40.50.10610|PF03886|SSF159594
ymcA|ymcA|AP_001613.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR010344	Protein of unknown function DUF940		PF06082|PS51257
ymcB|ymcB|AP_001614.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR010425	Domain of unknown function DUF1017		PF06251
ymcC|ymcC|AP_001615.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR021308|IPR023373	Protein of unknown function DUF2886|YmcC-like domain		G3DSA:2.40.360.10|PF11102|PS51257|SSF159270
ymcD|ymcD|AP_001616.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091				
ymcE|ymcE|AP_001621.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091				
ymdA|ymdA|AP_001671.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091				
ymdB|ymdB|AP_001672.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002589|IPR024900	Appr-1-p processing|O-acetyl-ADP-ribose deacetylase		G3DSA:3.40.220.10|MF_01205|PF01661|PS51154|PTHR11106|PTHR11106:SF37|SM00506|SSF52949
ymdC|ymdC|AP_001673.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001736|IPR025202	Phospholipase D-like domain|Phospholipase D/Transphosphatidylase	GO:0003824|GO:0008152	G3DSA:3.30.870.10|PF13091|PS50035|PTHR10185|PTHR10185:SF10|SM00155|SSF56024
ymdF|ymdF|AP_001636.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR019626	Stress-induced protein, KGG, repeat		PF10685
ymfA|ymfA|AP_001748.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR021994	Protein of unknown function DUF3592		PF12158
ymfB|ymfB|AP_001760.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000086|IPR015797|IPR020084|IPR020476	NUDIX hydrolase|NUDIX hydrolase domain|NUDIX hydrolase domain-like|NUDIX hydrolase, conserved site	GO:0016787	G3DSA:3.90.79.10|PF00293|PR00502|PS00893|PS51462|PTHR22769|PTHR22769:SF0|SSF55811
ymfC|ymfC|AP_001761.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000748|IPR006145|IPR020103	Pseudouridine synthase, RsuA/RluB/C/D/E/F|Pseudouridine synthase, RsuA/RluB/E/F|Pseudouridine synthase, catalytic domain	GO:0001522|GO:0003723|GO:0009451|GO:0009982|GO:0016866	PF00849|PTHR21600|PTHR21600:SF2|SSF55120|TIGR00093
ymfD|ymfD|AP_001763.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091				G3DSA:3.40.50.150|PF13489|SSF53335
ymfE|ymfE|AP_001764.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091				
ymfG|ymfG|AP_001767.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR009061|IPR012884	DNA binding domain, putative|Excisionase-like	GO:0000166|GO:0003677|GO:0006310	G3DSA:1.10.1660.20|PF07825|SSF46955
ymfH|ymfH|AP_001768.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091				
ymfK|ymfK|AP_001771.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR011056|IPR015927|IPR019759	Peptidase S24/S26A/S26B|Peptidase S24/S26A/S26B/S26C|Peptidase S24/S26A/S26B/S26C, beta-ribbon domain		G3DSA:2.10.109.10|PF00717|SSF51306
ymfN|ymfN|AP_001775.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR005021|IPR011991	Bacteriophage bIL285, Orf41, terminase|Winged helix-turn-helix DNA-binding domain		G3DSA:1.10.10.10|PF03354|PF13730|SSF46785
ymfO|ymfO|AP_001777.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR006944	Bacteriophage/Gene transfer agent portal protein		PF04860
ymfP|ymfP|AP_001778.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR006949	Baseplate assembly protein J-like, predicted		PF04865
ymfQ|ymfQ|AP_001779.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR018755	Bacteriophage Mu, Gp48		PF10076
ymfR|ymfR|AP_001776.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR020297	Protein of unknown function YmfR		PD052744
ymfS|ymfS|AP_001781.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003458	Bacteriophage T4, Gp38, tail fibre assembly		PF02413
ymfT|ymfT|AP_001772.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR010982	Lambda repressor-like, DNA-binding domain	GO:0003677	G3DSA:1.10.260.40
ymgB|ymgB|AP_001791.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR024753	Regulatory protein AriR	GO:0042710|GO:0071229	PD865043|PF10798
ymgD|ymgD|AP_001795.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091				
ymgE|ymgE|AP_001820.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR007341	Transglycosylase-associated protein	GO:0016021	PF04226
ymgF|ymgF|AP_001794.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091				
ymgG|ymgG|AP_001796.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR027367	YMGG-like Gly-zipper		PF13441|PF13488
ymjA|ymjA|AP_001921.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR020251	Uncharacterised protein family, YmjA		PD059807|PF10820
ymjB|ymjB|AP_001945.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR008995	Molybdate/tungstate binding, C-terminal		SSF50331
ymjC|ymjC|AP_001954.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR016040	NAD(P)-binding domain		G3DSA:3.40.50.720|SSF51735
ynaA|ynaA|AP_001996.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR009628	Bacteriophage lambda, GpH, tail tape measure, N-terminal		PF06791
ynaI|ynaI|AP_001958.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR006685|IPR006686|IPR010920|IPR011014|IPR011066	Like-Sm (LSM) domain|Mechanosensitive ion channel MscS|Mechanosensitive ion channel MscS, C-terminal|Mechanosensitive ion channel MscS, conserved site|Mechanosensitive ion channel MscS, transmembrane-2	GO:0016020|GO:0055085	G3DSA:2.30.30.60|G3DSA:3.30.70.100|PF00924|PS01246|PTHR30566|SSF50182|SSF82689|SSF82861
ynaJ|ynaJ|AP_001960.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR019685	Protein of unknown function DUF2534		PF10749
ynaK|ynaK|AP_001994.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003115	ParB-like nuclease	GO:0003677	G3DSA:3.90.1530.10|PF02195|SM00470|SSF110849
ynbA|ynbA|AP_002033.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000462	CDP-alcohol phosphatidyltransferase	GO:0008654|GO:0016020|GO:0016780	PF01066|PTHR22572|PTHR22572:SF54
ynbB|ynbB|AP_002034.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000374	Phosphatidate cytidylyltransferase	GO:0016020|GO:0016772	PF01148|PS01315|PTHR13773|PTHR13773:SF0
ynbC|ynbC|AP_002035.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR022742|IPR022744	Alpha/beta hydrolase, N-terminal|Methyltransferase domain, putative		G3DSA:3.40.50.150|G3DSA:3.40.50.1820|PF12146|PF12147|PTHR11614|PTHR11614:SF1|SSF53335|SSF53474
ynbD|ynbD|AP_002036.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000326|IPR000340|IPR000387|IPR016130|IPR020422|IPR024950	Dual specificity phosphatase|Dual specificity phosphatase, catalytic domain|Dual specificity phosphatase, subgroup, catalytic domain|Phosphatidic acid phosphatase type 2/haloperoxidase|Protein-tyrosine phosphatase, active site|Protein-tyrosine/Dual specificity phosphatase	GO:0003824|GO:0004725|GO:0006470|GO:0008138|GO:0016020|GO:0016311|GO:0016791	G3DSA:3.90.190.10|PF00782|PF01569|PS00383|PS50056|PTHR10159|PTHR10159:SF130|SM00195|SSF52799
ynbE|ynbE|AP_002009.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR025985	YnbE-like lipoprotein		PD052969|PF13617|PS51257
yncA|yncA|AP_002071.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR016181	Acyl-CoA N-acyltransferase		G3DSA:3.40.630.30|PF13420|PTHR23091|PTHR23091:SF1|SSF55729
yncB|yncB|AP_002072.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002085|IPR011032|IPR013149|IPR016040	Alcohol dehydrogenase superfamily, zinc-type|Alcohol dehydrogenase, C-terminal|GroES-like|NAD(P)-binding domain	GO:0008270|GO:0016491|GO:0055114	G3DSA:3.40.50.720|G3DSA:3.90.180.10|PF00107|PTHR11695|PTHR11695:SF298|SSF50129|SSF51735
yncC|yncC|AP_002073.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000524|IPR008920|IPR011711|IPR011991|IPR027376	FadR/GntR C-terminal domain|Fatty acid responsive transcription factor FadR, C-terminal|GntR, C-terminal|Transcription regulator HTH, GntR|Winged helix-turn-helix DNA-binding domain	GO:0000062|GO:0003677|GO:0003700|GO:0005622|GO:0006355|GO:0019217	G3DSA:1.10.10.10|G3DSA:1.20.120.530|PF00392|PF07729|PS50949|PTHR11751|PTHR11751:SF20|SM00345|SM00895|SSF46785|SSF48008
yncD|yncD|AP_002074.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000531|IPR010105|IPR012910	TonB-dependent receptor, beta-barrel|TonB-dependent receptor, plug|TonB-dependent siderophore receptor	GO:0004872|GO:0005215|GO:0005506|GO:0006810|GO:0015343|GO:0015891|GO:0016020	G3DSA:2.170.130.10|G3DSA:2.40.170.20|PF00593|PF07715|PTHR32552|PTHR32552:SF0|SSF56935|TIGR01783
yncE|yncE|AP_002075.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR011048|IPR015943	Cytochrome cd1-nitrite reductase-like, C-terminal haem d1|WD40/YVTN repeat-like-containing domain	GO:0005515	G3DSA:2.130.10.10|PF13360|SSF51004
yncG|yncG|AP_002077.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004045|IPR010987|IPR012336|IPR017933	Glutathione S-transferase, C-terminal-like|Glutathione S-transferase, N-terminal|Glutathione S-transferase/chloride channel, C-terminal|Thioredoxin-like fold	GO:0005515	G3DSA:1.20.1050.10|G3DSA:3.40.30.10|PF13417|PS50404|PS50405|PTHR11260|PTHR11260:SF56|SSF47616|SSF52833
yncH|yncH|AP_002078.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR020099	Uncharacterised protein family YncH		PD055765
yncI|yncI|AP_002081.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002559	Transposase, IS4-like	GO:0003677|GO:0004803|GO:0006313	PF01609|PF13808|PTHR30298
yncJ|yncJ|AP_002059.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR020117	Uncharacterised protein family YncJ		PD057831|PF10829
yncM|yncM|AP_002082.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002559	Transposase, IS4-like	GO:0003677|GO:0004803|GO:0006313	PF01609|PTHR30298
yncN|yncN|AP_002060.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR012933|IPR015146	HicA mRNA interferase family|Ribonucleotide reductase, stirrup	GO:0003729|GO:0016788	G3DSA:3.30.920.30|PF07927|SSF54786
yneE|yneE|AP_002141.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR021134	Bestrophin/UPF0187		PF01062
yneF|yneF|AP_002143.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000160|IPR001054	Adenylyl cyclase class-3/4/guanylyl cyclase|GGDEF domain	GO:0009190|GO:0016849|GO:0035556	G3DSA:3.30.70.270|PF00990|SM00267|SSF55073|TIGR00254
yneG|yneG|AP_002144.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR020378	Protein of unknown function DUF4186		PD076485|PF13811
yneH|yneH|AP_002145.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR012338|IPR015868	Beta-lactamase/transpeptidase-like|Glutaminase	GO:0004359|GO:0006541	G3DSA:3.40.710.10|MF_00313|PF04960|PTHR12544|PTHR12544:SF2|SSF56601|TIGR03814
yneI|yneI|AP_002146.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR015590|IPR016160|IPR016161|IPR016162|IPR016163	Aldehyde dehydrogenase domain|Aldehyde dehydrogenase, C-terminal|Aldehyde dehydrogenase, N-terminal|Aldehyde dehydrogenase, conserved site|Aldehyde/histidinol dehydrogenase	GO:0008152|GO:0016491|GO:0016620|GO:0055114	G3DSA:3.40.309.10|G3DSA:3.40.605.10|PF00171|PS00070|PTHR11699|PTHR11699:SF28|SSF53720
yneJ|yneJ|AP_002147.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000847|IPR005119|IPR011991	LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain	GO:0003700|GO:0006355	G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PS50931|PTHR30126|SSF46785|SSF53850
yneL|yneL|AP_002128.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR018060	DNA binding HTH domain, AraC-type	GO:0003700|GO:0006355|GO:0043565	PF12833|PS01124
ynfA|ynfA|AP_002203.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003844	Uncharacterised protein family UPF0060	GO:0016020	MF_00010|PF02694|SSF103481
ynfB|ynfB|AP_002204.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR009700	Protein of unknown function DUF1283		PF06932
ynfC|ynfC|AP_002206.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR010646	Uncharacterised protein family UPF0257	GO:0005886	MF_01065|PD120112|PF06788|PS51257
ynfD|ynfD|AP_002207.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR010595	Protein of unknown function DUF1161		PD336997|PF06649
ynfE|ynfE|AP_002208.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR006311|IPR006655|IPR006656|IPR006657|IPR006963|IPR009010|IPR011888	Anaerobic dimethyl sulphoxide reductase, subunit A, DmsA/YnfE|Aspartate decarboxylase-like domain|Molybdopterin oxidoreductase|Molybdopterin oxidoreductase, 4Fe-4S domain|Molybdopterin oxidoreductase, prokaryotic, conserved site|Molydopterin dinucleotide-binding domain|Twin-arginine translocation pathway, signal sequence	GO:0009055|GO:0009389|GO:0016491|GO:0030151|GO:0051539|GO:0055114	G3DSA:2.20.25.90|G3DSA:2.40.40.20|G3DSA:3.40.228.10|G3DSA:3.40.50.740|PF00384|PF01568|PF04879|PS00932|PS51318|PTHR11615|PTHR11615:SF78|SM00926|SSF50692|SSF53706|TIGR02166
ynfF|ynfF|AP_002209.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR006311|IPR006655|IPR006656|IPR006657|IPR006963|IPR009010|IPR011888|IPR027467	Anaerobic dimethyl sulphoxide reductase, subunit A, DmsA/YnfE|Aspartate decarboxylase-like domain|Molybdopterin oxidoreductase|Molybdopterin oxidoreductase, 4Fe-4S domain|Molybdopterin oxidoreductase, molybdopterin cofactor binding site|Molybdopterin oxidoreductase, prokaryotic, conserved site|Molydopterin dinucleotide-binding domain|Twin-arginine translocation pathway, signal sequence	GO:0009055|GO:0009389|GO:0016491|GO:0030151|GO:0051539|GO:0055114	G3DSA:2.20.25.90|G3DSA:2.40.40.20|G3DSA:3.40.228.10|G3DSA:3.40.50.740|PF00384|PF01568|PF04879|PS00551|PS00932|PS51318|PTHR11615|PTHR11615:SF79|SM00926|SSF50692|SSF53706|TIGR02166
ynfG|ynfG|AP_002210.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001450|IPR014297|IPR017896|IPR017900	4Fe-4S binding domain|4Fe-4S ferredoxin, iron-sulphur binding, conserved site|4Fe-4S ferredoxin-type, iron-sulpur binding domain|Dimethylsulphoxide reductase, chain B	GO:0009055|GO:0051536	G3DSA:3.30.70.20|PF00037|PF12797|PF12798|PS00198|PS51379|PTHR11938|PTHR11938:SF10|SSF54862|TIGR02951
ynfH|ynfH|AP_002211.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR007059	DMSO reductase anchor subunit (DmsC)	GO:0016021|GO:0019645	PF04976
ynfK|ynfK|AP_002214.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002586|IPR004472|IPR027417	CobQ/CobB/MinD/ParA nucleotide binding domain|Dethiobiotin synthase BioD|P-loop containing nucleoside triphosphate hydrolase	GO:0000287|GO:0004141|GO:0005524|GO:0009102	G3DSA:3.40.50.300|MF_00336|PF01656|PIRSF006755|PTHR21343|PTHR21343:SF0|SSF52540|TIGR00347
ynfL|ynfL|AP_002216.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000847|IPR005119|IPR011991	LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain	GO:0003700|GO:0006355	G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PR00039|PS50931|PTHR30346|SSF46785|SSF53850
ynfM|ynfM|AP_002217.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR005829|IPR011701|IPR016196|IPR020846	Major facilitator superfamily|Major facilitator superfamily domain|Major facilitator superfamily domain, general substrate transporter|Sugar transporter, conserved site	GO:0005215|GO:0006810|GO:0016020|GO:0016021|GO:0055085	G3DSA:1.20.1250.20|PF07690|PS00216|PS50850|PTHR24003|PTHR24003:SF33|SSF103473
ynfO|ynfO|AP_002170.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR025030	Domain of unknown function DUF3950		PF13132
ynhG|ynhG|AP_002298.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002482|IPR005490|IPR018392	L,D-transpeptidase catalytic domain|Peptidoglycan-binding Lysin subgroup|Peptidoglycan-binding lysin domain	GO:0016740|GO:0016998	G3DSA:2.40.440.10|G3DSA:3.10.350.10|PF01476|PF03734|PTHR30582|PTHR30582:SF0|SM00257|SSF141523
yniA|yniA|AP_002344.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR011009|IPR016477	Fructosamine/Ketosamine-3-kinase|Protein kinase-like domain	GO:0016772	G3DSA:3.30.200.20|G3DSA:3.90.1200.10|PF03881|PIRSF006221|PTHR32228|PTHR32228:SF2|SSF56112
yniB|yniB|AP_002345.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR025229	YniB-like protein		PF14002
yniC|yniC|AP_002346.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR005833|IPR006402|IPR023198|IPR023214	HAD-like domain|HAD-superfamily hydrolase, subfamily IA, variant 3|Haloacid dehalogenase/epoxide hydrolase|Phosphoglycolate phosphatase, domain 2	GO:0008152|GO:0016787	G3DSA:1.10.150.240|G3DSA:3.40.50.1000|PF00702|PR00413|PTHR18901|SSF56784|TIGR01509
yniD|yniD|AP_002340.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091				
ynjA|ynjA|AP_002372.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003779	Carboxymuconolactone decarboxylase	GO:0051920|GO:0055114	G3DSA:1.20.1290.10|PF02627|SSF69118
ynjB|ynjB|AP_002373.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR027020	Protein ynjB		G3DSA:3.40.190.10|PF13416|PIRSF029172|SSF53850
ynjC|ynjC|AP_002374.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000515	Binding-protein-dependent transport systems inner membrane component	GO:0005215|GO:0006810|GO:0016020	G3DSA:1.10.3720.10|PF00528|PS50928|SSF161098
ynjD|ynjD|AP_002375.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003439|IPR003593|IPR017871|IPR027417	AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase	GO:0000166|GO:0005524|GO:0016887|GO:0017111	G3DSA:3.40.50.300|PF00005|PS00211|PS50893|PTHR24220|PTHR24220:SF45|SM00382|SSF52540
ynjE|ynjE|AP_002376.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001307|IPR001763	Rhodanese-like domain|Thiosulphate sulfurtransferase, conserved site	GO:0004792	G3DSA:3.40.250.10|PF00581|PS00380|PS00683|PS50206|PS51257|PTHR11364|PTHR11364:SF0|SM00450|SSF52821
ynjF|ynjF|AP_002377.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000462	CDP-alcohol phosphatidyltransferase	GO:0008654|GO:0016020|GO:0016780	PF01066|PS00379
ynjH|ynjH|AP_002379.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR009971	Protein of unknown function DUF1496		PF07383
ynjI|ynjI|AP_002381.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR009677	Protein of unknown function DUF1266		PF06889
yoaA|yoaA|AP_002427.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR006555|IPR006935|IPR010614|IPR014001|IPR014013|IPR027417	ATP-dependent helicase, C-terminal|DEAD2|Helicase, superfamily 1/2, ATP-binding domain|Helicase, superfamily 1/2, ATP-binding domain, DinG/Rad3-type|Helicase/UvrB domain|P-loop containing nucleoside triphosphate hydrolase	GO:0003676|GO:0003677|GO:0004003|GO:0005524|GO:0006139|GO:0008026|GO:0016787|GO:0016817|GO:0016818	G3DSA:3.40.50.300|PF04851|PF06733|PF13307|PS51193|PTHR11472|PTHR11472:SF31|SM00487|SM00491|SSF52540
yoaB|yoaB|AP_002428.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR006175|IPR013813|IPR019897	Endoribonuclease L-PSP/chorismate mutase-like|YjgF-like protein, conserved site|YjgF/Yer057p/UK114 family		G3DSA:3.30.1330.40|PF01042|PS01094|PTHR11803|SSF55298
yoaC|yoaC|AP_002429.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR015079	Protein of unknown function DUF1889		PF08986|SSF140670
yoaD|yoaD|AP_002434.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001633|IPR024744	Diguanylate phosphodiesterase, EAL domain|Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain		G3DSA:3.20.20.450|PF00563|PF12792|PS50883|PTHR30394|PTHR30394:SF0|SM00052|SSF141868
yoaE|yoaE|AP_002435.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000644|IPR005170|IPR005496|IPR016166|IPR016169	CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2|Cystathionine beta-synthase, core|FAD-binding, type 2|Integral membrane protein TerC|Transporter-associated domain	GO:0003824|GO:0005515|GO:0016021|GO:0016614|GO:0050660|GO:0055114	G3DSA:3.10.580.10|G3DSA:3.30.465.10|PF00571|PF03471|PF03741|PS51371|PTHR22777|PTHR22777:SF0|SM01091|SSF54631|SSF56176
yoaF|yoaF|AP_002412.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR005590	Protein of unknown function DUF333		PF03891|PS51257
yoaG|yoaG|AP_002415.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR015051	Protein of unknown function DUF1869		G3DSA:3.30.160.220|PF08956|SSF103063
yoaH|yoaH|AP_002430.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR005371	Uncharacterised protein family UPF0181		MF_00507|PD026807|PF03701
yoaI|yoaI|AP_002407.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091				
yobA|yobA|AP_002461.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR007348|IPR014755|IPR014756	CopC domain|Copper resistance protein CopC/internalin, immunoglobulin-like|Immunoglobulin E-set	GO:0005507|GO:0042597|GO:0046688	G3DSA:2.60.40.1220|PF04234|SSF81296
yobB|yobB|AP_002463.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003010	Carbon-nitrogen hydrolase	GO:0006807|GO:0016810	G3DSA:3.60.110.10|PF00795|SSF56317
yobD|yobD|AP_002439.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR009328	Protein of unknown function DUF986		MF_01071|PD091196|PF06173|PIRSF020687
yobF|yobF|AP_002443.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR019672	Protein of unknown function DUF2627		PF10736
yobG|yobG|AP_002445.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR020907	MgrB protein		MF_01596|PF13998|PS51257
yobH|yobH|AP_002446.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR025611	YobH-like protein		PF13996
yodA|yodA|AP_002581.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR011038|IPR012674|IPR015304	Calycin|Calycin-like|YodA		G3DSA:2.40.128.20|PF09223|PTHR30477|SSF50814
yodB|yodB|AP_002582.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR016174	Di-haem cytochrome, transmembrane	GO:0016020|GO:0022904	PF00033|PTHR30529|PTHR30529:SF0|SSF81342
yodC|yodC|AP_002568.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR019226	Protein of unknown function DUF2158		PF09926
yodD|yodD|AP_002565.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR019669	Uncharacterised bacterial stress protein YodD		PF10733
yoeB|yoeB|AP_002617.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR009614	Addiction module toxin, Txe/YoeB	GO:0004519|GO:0006401	PF06769|SSF143011|TIGR02116
yoeE|yoeE|AP_002598.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR012910	TonB-dependent receptor, plug	GO:0004872|GO:0005215|GO:0006810|GO:0016020	G3DSA:2.170.130.10|PF07715|SSF56935
yoeF|yoeF|AP_002606.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR012381|IPR027417	Ethanolamine/propanediol utilisation protein, EutP/PduV|P-loop containing nucleoside triphosphate hydrolase	GO:0005524|GO:0006576	G3DSA:3.40.50.300|PF10662|SSF52540
yohC|yohC|AP_002732.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR006977	Yip1 domain	GO:0016020	PF04893
yohD|yohD|AP_002733.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR015414	SNARE associated Golgi protein		PF09335|PTHR30353|PTHR30353:SF0
yohF|yohF|AP_002734.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002198|IPR002347|IPR016040|IPR020904	Glucose/ribitol dehydrogenase|NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR|Short-chain dehydrogenase/reductase, conserved site	GO:0008152|GO:0016491	G3DSA:3.40.50.720|PF00106|PR00080|PR00081|PS00061|PTHR24322|SSF51735
yohG|yohG|AP_002735.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003423|IPR010131	Outer membrane efflux protein|RND efflux system, outer membrane lipoprotein, NodT	GO:0005215|GO:0006810|GO:0008289|GO:0016020	G3DSA:1.20.1600.10|G3DSA:2.20.200.10|PF02321|PTHR30203|PTHR30203:SF0|SSF56954|TIGR01845
yohJ|yohJ|AP_002738.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR005538	Uncharacterised protein family LrgA/YohJ/UPF0299	GO:0016021	PF03788
yohK|yohK|AP_002739.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR005261|IPR007300	Conserved hypothetical protein CHP00659|LrgB-like protein		PF04172|PTHR30249|TIGR00659
yohL|yohL|AP_002703.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003735	Metal-sensitive transcriptional repressor		PF02583
yohM|yohM|AP_002704.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR011541	Nickel/cobalt transporter, high-affinity	GO:0006824|GO:0015087|GO:0015099|GO:0015675|GO:0016021|GO:0046872|GO:0055085	PF03824
yohN|yohN|AP_002705.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR024572	Protein of unknown function DUF3315		PD456999|PF11776
yohO|yohO|AP_002724.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR020870	Uncharacterised protein family UPF0387, membrane	GO:0005886	MF_01362
yojI|yojI|AP_002807.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003439|IPR003593|IPR005898|IPR011527|IPR017871|IPR017940|IPR027417	AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter, integral membrane type 1|ABC transporter, transmembrane domain, type 1|ABC transporter-like|Cyclic peptide transporter|P-loop containing nucleoside triphosphate hydrolase	GO:0000166|GO:0005524|GO:0006810|GO:0015197|GO:0015833|GO:0016021|GO:0016887|GO:0017111|GO:0042626|GO:0055085	G3DSA:1.20.1560.10|G3DSA:3.40.50.300|PF00005|PS00211|PS50893|PS50929|PTHR24220|SM00382|SSF52540|SSF90123|TIGR01194
yojL|yojL|AP_002810.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003374|IPR024932	ApbE family|Thiamine biosynthesis lipoprotein ApbE	GO:0009228|GO:0042597	PF02424|PIRSF006268|PS51257|PTHR30040|SSF143631
ypdA|ypdA|AP_002980.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003018|IPR003594|IPR010559|IPR011620	GAF domain|Histidine kinase-like ATPase, ATP-binding domain|Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region|Signal transduction histidine kinase, internal region	GO:0000155|GO:0000160|GO:0004673|GO:0005515|GO:0005524|GO:0016021|GO:0071555	G3DSA:3.30.565.10|PF02518|PF06580|PF07694|PTHR10919|PTHR10919:SF32|SM00065|SM00387|SSF55781|SSF55874
ypdB|ypdB|AP_002981.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001789|IPR007492|IPR011006	CheY-like superfamily|LytTR DNA-binding domain|Signal transduction response regulator, receiver domain	GO:0000156|GO:0000160|GO:0003677|GO:0006355	G3DSA:2.20.25.10|G3DSA:2.40.50.40|G3DSA:3.40.50.2300|PF00072|PF04397|PTHR26402|SM00448|SM00850|SSF52172
ypdC|ypdC|AP_002982.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR009057|IPR018060|IPR020449	DNA binding HTH domain, AraC-type|Homeodomain-like|Transcription regulator HTH, AraC- type	GO:0003677|GO:0003700|GO:0005622|GO:0006355|GO:0043565	G3DSA:1.10.10.60|PF12833|PR00032|PTHR11019|PTHR11019:SF25|SM00342|SSF46689
ypdD|ypdD|AP_002983.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000032|IPR000121|IPR002178|IPR004715|IPR005698|IPR006318|IPR008279|IPR008731|IPR015813|IPR016152|IPR023151	PEP-utilising enzyme, C-terminal|PEP-utilising enzyme, conserved site|PEP-utilising enzyme, mobile domain|Phosphoenolpyruvate-utilising enzyme|Phosphotransferase system, IIA component fructose subfamily|Phosphotransferase system, PEP-utilising enzyme, N-terminal|Phosphotransferase system, phosphocarrier HPr protein|Phosphotransferase system, phosphocarrier HPr protein-like|Phosphotransferase system, phosphoenolpyruvate-dependent sugar EIIA 2|Phosphotransferase/anion transporter|Pyruvate/Phosphoenolpyruvate kinase-like domain	GO:0003824|GO:0005215|GO:0005351|GO:0005737|GO:0006810|GO:0008965|GO:0008982|GO:0009401|GO:0016021|GO:0016310|GO:0016772	G3DSA:1.10.274.10|G3DSA:3.20.20.60|G3DSA:3.30.1340.10|G3DSA:3.40.930.10|G3DSA:3.50.30.10|PF00359|PF00381|PF00391|PF02896|PF05524|PR01736|PS00742|PS51094|PS51350|PTHR22931|PTHR22931:SF10|SSF47831|SSF51621|SSF52009|SSF55594|SSF55804|TIGR00848|TIGR01417
ypdE|ypdE|AP_002984.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR008007|IPR023367	Peptidase M42|Peptidase M42, domain 2		G3DSA:2.40.30.40|G3DSA:3.40.630.10|PF05343|PIRSF001123|PTHR32481|PTHR32481:SF0|SSF101821|SSF53187
ypdF|ypdF|AP_002985.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000587|IPR000994|IPR001714	Creatinase|Peptidase M24, methionine aminopeptidase|Peptidase M24, structural domain	GO:0004177|GO:0006508|GO:0008235|GO:0009987|GO:0016787	G3DSA:3.40.350.10|G3DSA:3.90.230.10|PF00557|PF01321|PR00599|PTHR10804|SSF53092|SSF55920
ypdG|ypdG|AP_002986.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003352|IPR013014	Phosphotransferase system, EIIC|Phosphotransferase system, EIIC component, type 2	GO:0005351|GO:0008982|GO:0009401|GO:0016020	PF02378|PS51104|PTHR30505|PTHR30505:SF0
ypdH|ypdH|AP_002987.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003353|IPR003501|IPR013011	Phosphotransferase system, EIIB component, type 2|Phosphotransferase system, EIIB component, type 2/3|Phosphotransferase system, fructose-specific IIB subunit	GO:0005351|GO:0008982|GO:0009401|GO:0016020	G3DSA:3.40.50.2300|PF02302|PS51099|PTHR30505|PTHR30505:SF0|SSF52794|TIGR00829
ypdI|ypdI|AP_002976.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091				PS51257
ypeA|ypeA|AP_003028.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000182|IPR016181|IPR023072	Acetyltransferase, YpeA|Acyl-CoA N-acyltransferase|GNAT domain	GO:0008080|GO:0016747	G3DSA:3.40.630.30|MF_01127|PF00583|PS51186|PTHR23091|PTHR23091:SF63|SSF55729
ypeB|ypeB|AP_003004.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR024530	Protein of unknown function DUF3820		PD056452|PF12843
ypeC|ypeC|AP_002990.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR019638	Protein of unknown function DUF2502		PF10697
ypfE|ypfE|AP_003047.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000249|IPR009307	Ethanolamine utilisation EutS|Microcompartment protein, bacteria	GO:0006580	PF00936|PIRSF012296|SM00877|SSF143414
ypfG|ypfG|AP_003051.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR009560	Protein of unknown function DUF1176		PF06674
ypfH|ypfH|AP_003059.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003140	Phospholipase/carboxylesterase/thioesterase	GO:0016787	G3DSA:3.40.50.1820|PF02230|PTHR10655|PTHR10655:SF15|SSF53474
ypfI|ypfI|AP_003060.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000182|IPR007807|IPR013562|IPR016181|IPR024914|IPR027417	Acyl-CoA N-acyltransferase|Domain of unknown function DUF1726|GNAT domain|Helicase domain|P-loop containing nucleoside triphosphate hydrolase|tRNA(Met) cytidine acetyltransferase TmcA	GO:0000049|GO:0002101|GO:0008080|GO:0051391|GO:0051392	G3DSA:3.40.630.30|MF_01886|PF05127|PF08351|PF13718|PF13725|PS51186|PTHR10925|PTHR10925:SF1|SSF52540|SSF55729
ypfJ|ypfJ|AP_003061.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR007343	Uncharacterised protein family, zinc metallopeptidase putative		PF04228|PTHR30168
ypfN|ypfN|AP_003058.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR020910	Uncharacterised protein family UPF0370		MF_01566|PF13980
yphA|yphA|AP_003129.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR011637	Uncharacterised protein family YphA		PF07681
yphB|yphB|AP_003130.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR008183|IPR011013|IPR014718	Aldose 1-/Glucose-6-phosphate 1-epimerase|Galactose mutarotase-like domain|Glycoside hydrolase-type carbohydrate-binding, subgroup	GO:0003824|GO:0005975|GO:0016853|GO:0030246	G3DSA:2.70.98.10|PF01263|SSF74650
yphC|yphC|AP_003131.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002085|IPR002328|IPR011032|IPR013149|IPR013154|IPR016040	Alcohol dehydrogenase GroES-like|Alcohol dehydrogenase superfamily, zinc-type|Alcohol dehydrogenase, C-terminal|Alcohol dehydrogenase, zinc-type, conserved site|GroES-like|NAD(P)-binding domain	GO:0008270|GO:0016491|GO:0055114	G3DSA:3.40.50.720|G3DSA:3.90.180.10|PF00107|PF08240|PS00059|PTHR11695|PTHR11695:SF38|SSF50129|SSF51735
yphD|yphD|AP_003132.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001851	ABC transporter, permease	GO:0005215|GO:0006810|GO:0016020	PF02653|PTHR32196|PTHR32196:SF0
yphE|yphE|AP_003133.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003439|IPR003593|IPR017871|IPR027417	AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase	GO:0000166|GO:0005524|GO:0016887|GO:0017111	G3DSA:3.40.50.300|PF00005|PS00211|PS50893|PTHR24220|PTHR24220:SF169|SM00382|SSF52540
yphF|yphF|AP_003134.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR025997	Periplasmic binding protein domain		G3DSA:3.40.50.2300|PF13407|SSF53822
yphG|yphG|AP_003135.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR011990|IPR013026|IPR013105|IPR019734	Tetratricopeptide TPR2|Tetratricopeptide repeat|Tetratricopeptide repeat-containing domain|Tetratricopeptide-like helical	GO:0005515	G3DSA:1.25.40.10|PF07719|PF13414|PF13432|PS50293|PTHR23083|PTHR23083:SF132|SM00028|SSF48452
yphH|yphH|AP_003136.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000600|IPR011991	ROK|Winged helix-turn-helix DNA-binding domain		G3DSA:1.10.10.10|G3DSA:3.30.420.40|PF00480|PTHR18964|PTHR18964:SF100|SSF46785|SSF53067
ypjA|ypjA|AP_003226.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003991|IPR004899|IPR005546|IPR006315|IPR011050|IPR012332	Autotransporter beta-domain|Outer membrane autotransporter barrel|P22 tailspike C-terminal domain-like|Pectin lyase fold/virulence factor|Pertactin virulence factor family|Pertactin, central region	GO:0007155|GO:0019867	G3DSA:2.160.20.20|G3DSA:2.40.128.130|PF03212|PF03797|PR01484|PS51208|PTHR12338|PTHR12338:SF3|SM00869|SSF103515|SSF51126|TIGR01414
ypjC|ypjC|AP_003228.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR020227	Uncharacterised protein family, YpjC		PD094182
ypjD|ypjD|AP_003192.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002541	Cytochrome c assembly protein	GO:0006461|GO:0008535|GO:0016020	PF01578
ypjF|ypjF|AP_003225.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR009610	Protein of unknown function DUF1219		PF06755
ypjJ|ypjJ|AP_003223.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR009329	Protein of unknown function DUF987		PD056719|PF06174
ypjK|ypjK|AP_003214.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091				
ypjL|ypjL|AP_003218.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000802	Arsenite/antimonite efflux pump membrane protein,  ArsB	GO:0015105|GO:0015700|GO:0016021	PF02040|PR00758|PTHR10283|PTHR10283:SF21
yqaA|yqaA|AP_003261.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR015414	SNARE associated Golgi protein		PF09335
yqaB|yqaB|AP_003262.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR005833|IPR006402|IPR010976|IPR023214	Beta-phosphoglucomutase hydrolase|HAD-like domain|HAD-superfamily hydrolase, subfamily IA, variant 3|Haloacid dehalogenase/epoxide hydrolase	GO:0008152|GO:0016787	G3DSA:3.40.50.1000|PF00702|PR00413|PTHR18901|SSF56784|TIGR01509|TIGR02009
yqaD|yqaD|AP_003231.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR013780|IPR020316	Glycosyl hydrolase, family 13, all-beta|Uncharacterised protein family YgaQ		G3DSA:2.60.40.1180|PD063434|SSF51011
yqaE|yqaE|AP_003239.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000612	Proteolipid membrane potential modulator	GO:0016021	PF01679|PS01309|PTHR21659|PTHR21659:SF0
yqcA|yqcA|AP_003356.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001094|IPR008254	Flavodoxin|Flavodoxin/nitric oxide synthase	GO:0005506|GO:0010181|GO:0016491|GO:0055114	G3DSA:3.40.50.360|PF00258|PR00369|PS50902|PTHR19384|SSF52218
yqcB|yqcB|AP_003357.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR006145|IPR006224|IPR020103	Pseudouridine synthase, RluC/RluD, conserved site|Pseudouridine synthase, RsuA/RluB/C/D/E/F|Pseudouridine synthase, catalytic domain	GO:0001522|GO:0003723|GO:0009451|GO:0009982	PF00849|PS01129|PTHR10436|PTHR10436:SF39|SSF55120
yqcC|yqcC|AP_003358.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR007384|IPR023376	Protein of unknown function UCP006257|YqcC-like domain		G3DSA:1.20.1440.40|PF04287|PIRSF006257|SSF158452
yqcD|yqcD|AP_003360.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR016428|IPR020602	GTP cyclohydrolase I/Nitrile oxidoreductase|Nitrile oxidoreductase, NADPH-dependent, YqcD	GO:0005737|GO:0008616|GO:0046857|GO:0055114	G3DSA:3.30.1130.10|MF_00817|PF01227|PIRSF004750|SSF55620|TIGR03138
yqcE|yqcE|AP_003341.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR011701|IPR016196|IPR020846	Major facilitator superfamily|Major facilitator superfamily domain|Major facilitator superfamily domain, general substrate transporter	GO:0016021|GO:0055085	G3DSA:1.20.1250.20|PF07690|PS50850|PTHR24003|PTHR24003:SF36|SSF103473
yqeA|yqeA|AP_003434.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001048|IPR003964	Aspartate/glutamate/uridylate kinase|Bacterial carbamate kinase	GO:0006525|GO:0008652|GO:0008804	G3DSA:3.40.1160.10|PF00696|PIRSF000723|PR01469|PTHR30409|SSF53633|TIGR00746
yqeB|yqeB|AP_003435.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003777|IPR017695|IPR027051	Selenium-dependent molybdenum hydroxylase system protein, YqeB family|XdhC Rossmann domain|XdhC- CoxI		G3DSA:2.40.50.100|PF02625|PF13478|PTHR30388|PTHR30388:SF0|SSF53187|TIGR03309
yqeC|yqeC|AP_003436.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR013221|IPR017587	Mur ligase, central|Putative selenium-dependent hydroxylase accessory protein YqeC	GO:0005524|GO:0009058	G3DSA:3.40.1190.10|SSF53623|TIGR03172
yqeF|yqeF|AP_003407.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002155|IPR016038|IPR016039|IPR020610|IPR020613|IPR020615|IPR020616|IPR020617	Thiolase|Thiolase, C-terminal|Thiolase, N-terminal|Thiolase, active site|Thiolase, acyl-enzyme intermediate active site|Thiolase, conserved site|Thiolase-like|Thiolase-like, subgroup	GO:0003824|GO:0008152|GO:0016747	G3DSA:3.40.47.10|PF00108|PF02803|PIRSF000429|PS00098|PS00099|PS00737|PTHR18919|PTHR18919:SF9|SSF53901|TIGR01930
yqeG|yqeG|AP_003408.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR018227	Tryptophan/tyrosine permease		PF03222
yqeH|yqeH|AP_003409.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000792|IPR011991|IPR016032	Signal transduction response regulator, C-terminal effector|Transcription regulator LuxR, C-terminal|Winged helix-turn-helix DNA-binding domain	GO:0003677|GO:0003700|GO:0005622|GO:0006355|GO:0043565	G3DSA:1.10.10.10|PD116027|PF00196|SSF46894
yqeI|yqeI|AP_003410.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001867|IPR011991|IPR016032	Signal transduction response regulator, C-terminal|Signal transduction response regulator, C-terminal effector|Winged helix-turn-helix DNA-binding domain	GO:0000156|GO:0000160|GO:0003677|GO:0006355	G3DSA:1.10.10.10|PF00486|SM00862|SSF46894
yqeJ|yqeJ|AP_003411.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091				
yqfA|yqfA|AP_003458.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004254|IPR005744	Hly-III-related|HylII	GO:0016021|GO:0019835	PF03006|PTHR20855|PTHR20855:SF3|TIGR01065
yqfB|yqfB|AP_003459.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR007374|IPR008314|IPR015947	ASCH domain|PUA-like domain|Uncharacterised conserved protein UCP029143		G3DSA:2.30.130.30|MF_00684|PF04266|PIRSF029143|SM01022|SSF88697
yqfE|yqfE|AP_003473.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR005119	LysR, substrate-binding		PF03466|SSF53850
yqgA|yqgA|AP_003523.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR007563	Protein of unknown function DUF554		PF04474
yqgB|yqgB|AP_003496.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR020196	Uncharacterised protein family YqgB		PD050163|PF11036
yqgC|yqgC|AP_003497.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR020102	Uncharacterised protein family YqgC		PD056256
yqgD|yqgD|AP_003498.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR020263	Uncharacterised protein family YqgD		PD060540|PF10885
yqgE|yqgE|AP_003505.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003774	Protein of unknown function UPF0301		G3DSA:3.30.70.1300|G3DSA:3.40.1740.10|MF_00758|PF02622|PTHR30327|SSF143456
yqgF|yqgF|AP_003506.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR005227|IPR006641|IPR012337	Resolvase, holliday junction-type, YqgF-like|Ribonuclease H-like domain|YqgF/RNase H-like domain	GO:0003676|GO:0005737|GO:0006139|GO:0006281|GO:0006310|GO:0006974|GO:0016788	G3DSA:3.30.420.140|MF_00651|PF03652|SM00732|SSF53098|TIGR00250
yqhA|yqhA|AP_003555.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR005134|IPR020761|IPR020765	Uncharacterised protein family UPF0114|Uncharacterised protein family UPF0114, bacteria|Uncharacterised protein family UPF0114, gammaproteobacteria	GO:0005886	MF_00143|PF03350|TIGR00645
yqhC|yqhC|AP_003561.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR009057|IPR009594|IPR018060	DNA binding HTH domain, AraC-type|Homeodomain-like|Transcription regulator HTH, AraC, N-terminal	GO:0003677|GO:0003700|GO:0006355|GO:0043565	G3DSA:1.10.10.60|PF06719|PF12833|PS01124|PTHR11019|SM00342|SSF46689
yqhD|yqhD|AP_003562.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001670|IPR018211	Alcohol dehydrogenase, iron-type|Alcohol dehydrogenase, iron-type, conserved site	GO:0016491|GO:0046872|GO:0055114	G3DSA:1.20.1090.10|G3DSA:3.40.50.1970|PF00465|PS00060|PS00913|PTHR11496|PTHR11496:SF46|SSF56796
yqhG|yqhG|AP_003564.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR024267|IPR024289	Domain of unknown function DUF3828|Lumazine-binding		PF12870|PF12883
yqhH|yqhH|AP_003565.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR016367	Murein-lipoprotein		G3DSA:1.20.5.190|PIRSF002855|PS51257|SSF58042
yqiA|yqiA|AP_003581.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR008886	Uncharacterised protein family UPF0227/Esterase YqiA		G3DSA:3.40.50.1820|PF05728|SSF53474
yqiB|yqiB|AP_003583.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR009659	Protein of unknown function DUF1249		PF06853
yqiC|yqiC|AP_003592.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR007475	Membrane fusogenic activity		PF04380
yqiG|yqiG|AP_003596.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000015|IPR018030|IPR025885|IPR025949	Fimbrial biogenesis outer membrane usher protein|Fimbrial membrane usher, conserved site|PapC N-terminal domain|PapC-like C-terminal domain	GO:0005215|GO:0005515|GO:0006810|GO:0016020	PF00577|PF13953|PF13954|PS01151|PTHR30451|PTHR30451:SF0|SSF141729
yqiH|yqiH|AP_003597.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001829|IPR008962|IPR016147|IPR016148|IPR018046	PapD-like|Pili assembly chaperone, C-terminal domain|Pili assembly chaperone, N-terminal, bacterial|Pili assembly chaperone, bacterial|Pili assembly chaperone, conserved site	GO:0030288|GO:0043711|GO:0071555	G3DSA:2.60.40.1070|G3DSA:2.60.40.360|PF00345|PF02753|PR00969|PS00635|PS51257|PTHR30251|SSF49354|SSF49584
yqiI|yqiI|AP_003598.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000259|IPR008966	Adhesion domain|Fimbrial-type adhesion domain	GO:0007155|GO:0009289	PF00419|SSF49401
yqiJ|yqiJ|AP_003600.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR010840	Protein of unknown function DUF1449		PF07290
yqiK|yqiK|AP_003601.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001107	Band 7 protein		PF01145|PTHR13806|PTHR13806:SF2|SM00244|SSF117892
yqjA|yqjA|AP_003644.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR015414	SNARE associated Golgi protein		PF09335|PTHR30353|PTHR30353:SF0
yqjB|yqjB|AP_003645.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR026574|IPR027398	Modulator protein MzrA|SecD export protein N-terminal TM domain		MF_00904|PF13721
yqjC|yqjC|AP_003646.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR009468	Protein of unknown function DUF1090		PF06476
yqjD|yqjD|AP_003647.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR010279	Protein of unknown function DUF883, ElaB		PF05957
yqjE|yqjE|AP_003648.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR009937	Protein of unknown function DUF1469		PF07332
yqjF|yqjF|AP_003650.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR011637	Uncharacterised protein family YphA		PF07681
yqjG|yqjG|AP_003651.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR010987|IPR012336|IPR016639|IPR017933	Glutathione S-transferase (GST)|Glutathione S-transferase, C-terminal-like|Glutathione S-transferase/chloride channel, C-terminal|Thioredoxin-like fold		G3DSA:1.20.1050.10|G3DSA:3.40.30.10|PF13409|PF13410|PIRSF015753|PS50405|PTHR32419|PTHR32419:SF5|SSF47616|SSF52833
yqjH|yqjH|AP_003619.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR007037|IPR013113|IPR017927|IPR017938	FAD-binding 9, siderophore-interacting|Ferredoxin reductase-type FAD-binding domain|Riboflavin synthase-like beta-barrel|Siderophore-interacting protein	GO:0016491|GO:0055114	G3DSA:2.40.30.10|G3DSA:3.40.50.80|PF04954|PF08021|PS51384|PTHR30157|SSF63380
yqjI|yqjI|AP_003620.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR005149|IPR011991	Transcription regulator PadR N-terminal|Winged helix-turn-helix DNA-binding domain		G3DSA:1.10.10.10|PF03551|SSF46785
yqjK|yqjK|AP_003649.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR025612	YqjK-like protein		PF13997
yraH|yraH|AP_003687.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000259|IPR008966	Adhesion domain|Fimbrial-type adhesion domain	GO:0007155|GO:0009289	G3DSA:2.60.40.1090|PF00419|SSF49401
yraI|yraI|AP_003688.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001829|IPR008962|IPR016147|IPR016148|IPR018046	PapD-like|Pili assembly chaperone, C-terminal domain|Pili assembly chaperone, N-terminal, bacterial|Pili assembly chaperone, bacterial|Pili assembly chaperone, conserved site	GO:0030288|GO:0043711|GO:0071555	G3DSA:2.60.40.1070|G3DSA:2.60.40.360|PF00345|PF02753|PR00969|PS00635|PTHR30251|SSF49354|SSF49584
yraJ|yraJ|AP_003689.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000015|IPR018030|IPR025885|IPR025949	Fimbrial biogenesis outer membrane usher protein|Fimbrial membrane usher, conserved site|PapC N-terminal domain|PapC-like C-terminal domain	GO:0005215|GO:0005515|GO:0006810|GO:0016020	PF00577|PF13953|PF13954|PS01151|PTHR30451|PTHR30451:SF0|SSF141729
yraK|yraK|AP_003690.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000259|IPR008966	Adhesion domain|Fimbrial-type adhesion domain	GO:0007155|GO:0009289	PF00419|PS51257|SSF49401
yraL|yraL|AP_003691.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000878|IPR008189|IPR014776|IPR014777|IPR018063	SAM-dependent methyltransferase RsmI, conserved site|Tetrapyrrole methylase|Tetrapyrrole methylase, subdomain 1|Tetrapyrrole methylase, subdomain 2|rRNA small subunit methyltransferase I	GO:0008152|GO:0008168	G3DSA:3.30.950.10|G3DSA:3.40.1010.10|MF_01877|PF00590|PIRSF005917|PS01296|PTHR21091|PTHR21091:SF18|SSF53790|TIGR00096
yraM|yraM|AP_003692.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR007443|IPR016026	Lytic transglycosylase, superhelical U-shaped and linker domain|Penicillin-binding protein activator LpoA	GO:0004553|GO:0042597	G3DSA:3.40.50.2300|MF_01890|PF04348|SSF48435|SSF53822
yraN|yraN|AP_003693.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003509|IPR011335|IPR011856	Restriction endonuclease  type II-like|Uncharacterised protein family UPF0102|tRNA endonuclease-like domain	GO:0003676|GO:0004518	G3DSA:3.40.1350.10|MF_00048|PF02021|SSF52980|TIGR00252
yraO|yraO|AP_003694.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001347|IPR023070	DnaA initiator-associating protein|Sugar isomerase (SIS)	GO:0005975|GO:0030246	G3DSA:3.40.50.10490|MF_01157|PF13580|PS51464|PTHR30390|PTHR30390:SF0|SSF53697
yraP|yraP|AP_003695.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR007055|IPR014004	BON domain|Transport-associated and nodulation domain, bacteria		PF04972|PS50914|PS51257|SM00749
yraQ|yraQ|AP_003696.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR005524	Protein of unknown function DUF318, transmembrane		PF03773
yraR|yraR|AP_003697.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR016040	NAD(P)-binding domain		G3DSA:3.40.50.720|PF13460|PTHR14097|PTHR14097:SF1|SSF51735
yrbA|yrbA|AP_003733.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002634	BolA protein		G3DSA:3.30.300.90|PF01722|PIRSF003113|PTHR12735|PTHR12735:SF8|SSF82657
yrbB|yrbB|AP_003734.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002645	STAS domain		G3DSA:3.30.750.24|PF13466|PS50801|SSF52091
yrbC|yrbC|AP_003735.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR008869|IPR023094	Toluene tolerance Ttg2/phospholipid-binding protein MlaC|Toluene tolerance protein, alpha-helical		G3DSA:1.10.10.640|G3DSA:3.10.450.50|PF05494|PIRSF004649
yrbD|yrbD|AP_003736.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003399	Mammalian cell entry-related		PF02470
yrbE|yrbE|AP_003737.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003453	Permease domain		PF02405|PTHR30188|TIGR00056
yrbF|yrbF|AP_003738.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003439|IPR003593|IPR017871|IPR027417	AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase	GO:0000166|GO:0005524|GO:0016887|GO:0017111	G3DSA:3.40.50.300|PF00005|PS00211|PS50893|PTHR24220|PTHR24220:SF123|SM00382|SSF52540
yrbG|yrbG|AP_003739.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004481|IPR004837	Sodium/calcium exchanger membrane region|Sodium/potassium/calcium exchanger	GO:0016021|GO:0055085	PF01699|PTHR10846|PTHR10846:SF8|TIGR00367
yrbK|yrbK|AP_003742.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR010664|IPR026265	Lipopolysaccharide assembly, LptC-related|Lipopolysaccharide export system protein LptC	GO:0015221|GO:0015920|GO:0016020	PF06835|PIRSF028513
yrbL|yrbL|AP_003750.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR011009|IPR019647	PhoP regulatory network protein YrbL|Protein kinase-like domain	GO:0016772	PF10707|SSF56112
yrdA|yrdA|AP_004511.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001451|IPR011004	Bacterial transferase hexapeptide repeat|Trimeric LpxA-like	GO:0016740	G3DSA:2.160.10.10|PF00132|PTHR13061|SSF51161
yrdB|yrdB|AP_004510.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR009962	Protein of unknown function DUF1488		G3DSA:3.30.160.140|PF07369|SSF160272
yrdC|yrdC|AP_004508.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR006070|IPR017945|IPR023535	DHBP synthase RibB-like alpha/beta domain|YrdC-like domain|tRNA threonylcarbamoyladenosine biosynthesis protein RimN (YrdC)	GO:0003725|GO:0005524|GO:0070526	G3DSA:3.90.870.10|MF_01852|PF01300|PS51163|PTHR17490|SSF55821
yrdD|yrdD|AP_004507.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR013498	DNA topoisomerase, type IA, zn finger	GO:0003677|GO:0003916|GO:0005694|GO:0006265	G3DSA:3.30.65.10|PF01396|SSF57783
yrfA|yrfA|AP_004398.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR019684	Protein of unknown function DUF2531		PF10748
yrfB|yrfB|AP_004397.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091				
yrfC|yrfC|AP_004396.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR007813	Fimbrial assembly PilN		PF05137
yrfD|yrfD|AP_004395.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091				SSF53067
yrfF|yrfF|AP_004392.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR010771	Intracellular growth attenuator IgaA	GO:0009276|GO:0016021	PD147088|PF07095
yrfG|yrfG|AP_004391.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR005833|IPR006402|IPR023214	HAD-like domain|HAD-superfamily hydrolase, subfamily IA, variant 3|Haloacid dehalogenase/epoxide hydrolase	GO:0008152|GO:0016787	G3DSA:3.40.50.1000|PF13419|PR00413|PTHR18901|SSF56784|TIGR01509
ysaB|ysaB|AP_004232.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR025728	YsaB-like lipoprotein		PF13983
ysgA|ysgA|AP_003970.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002925	Dienelactone hydrolase	GO:0016787	G3DSA:3.40.50.1820|PF01738|PTHR17630|PTHR17630:SF20|SSF53474
ytfA|ytfA|AP_004705.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR011075|IPR015893	Tetracycline transcriptional regulator, TetR-like, C-terminal|Tetracycline transcriptional regulator, TetR-related, C-terminal	GO:0003677	G3DSA:1.10.357.10|PTHR30328|PTHR30328:SF0|SSF48498
ytfB|ytfB|AP_004706.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR007340|IPR013731	Opacity-associated protein A|Opacity-associated protein A, N-terminal		PF04225|PF08525
ytfE|ytfE|AP_004709.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR007500|IPR012312|IPR019903|IPR023742	Domain of unknown function DUF542, ScdA N-terminal|Haemerythrin/HHE cation-binding motif|Iron-sulfur cluster repair protein YftE|Repair of iron centres family	GO:0006950|GO:0030091	G3DSA:1.20.120.520|MF_01606|PF01814|PF04405|TIGR03652
ytfF|ytfF|AP_004710.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000620	Drug/metabolite transporter	GO:0016020	PF00892|SSF103481
ytfG|ytfG|AP_004711.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR008030|IPR016040	NAD(P)-binding domain|NmrA-like		G3DSA:3.40.50.720|PF05368|PTHR14194|PTHR14194:SF21|SSF51735
ytfH|ytfH|AP_004712.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002577|IPR011991	Helix-turn-helix, HxlR type|Winged helix-turn-helix DNA-binding domain		G3DSA:1.10.10.10|PF01638|PS51118|SSF46785
ytfJ|ytfJ|AP_004716.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR006513	Conserved hypothetical protein CHP01626, YtfJ		PF09695|TIGR01626
ytfK|ytfK|AP_004717.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR009491	Protein of unknown function DUF1107		G3DSA:3.30.1910.10|PD055267|PF06526
ytfL|ytfL|AP_004718.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000644|IPR002550|IPR005170|IPR016166|IPR016169	CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2|Cystathionine beta-synthase, core|Domain of unknown function DUF21|FAD-binding, type 2|Transporter-associated domain	GO:0003824|GO:0005515|GO:0016614|GO:0050660|GO:0055114	G3DSA:3.10.580.10|G3DSA:3.30.465.10|PF00571|PF01595|PF03471|PS51371|PTHR22777|PTHR22777:SF0|SM00116|SM01091|SSF54631|SSF56176
ytfM|ytfM|AP_004720.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000184|IPR010827	Bacterial surface antigen (D15)|Surface antigen variable number	GO:0019867	G3DSA:2.40.160.50|PF01103|PF07244|PTHR12815|PTHR12815:SF6
ytfN|ytfN|AP_004721.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR007452	Protein of unknown function DUF490		PF04357
ytfP|ytfP|AP_004722.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR009288|IPR013024	AIG2-like|Butirosin biosynthesis, BtrG-like		G3DSA:3.10.490.10|PF06094|SSF110857
ytfQ|ytfQ|AP_004727.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR025997	Periplasmic binding protein domain		G3DSA:3.40.50.2300|PF13407|PTHR32196|PTHR32196:SF9|SSF53822
ytfR|ytfR|AP_004728.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003439|IPR003593|IPR017871|IPR027417	AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase	GO:0000166|GO:0005524|GO:0016887|GO:0017111	G3DSA:3.40.50.300|PF00005|PS00211|PS50893|PTHR24220|PTHR24220:SF169|SM00382|SSF52540
ytfT|ytfT|AP_004729.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001851	ABC transporter, permease	GO:0005215|GO:0006810|GO:0016020	PF02653|PTHR32196|PTHR32196:SF0
ytjA|ytjA|AP_004864.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR009760	Protein of unknown function DUF1328	GO:0005886	MF_01361|PF07043|PIRSF036466
ytjB|ytjB|AP_004875.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR019305	Uncharacterised protein family Smp		PF10144
ytjC|ytjC|AP_004883.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001345|IPR013078|IPR023086	Histidine phosphatase superfamily, clade-1|Phosphoglycerate mutase, GpmB, probable|Phosphoglycerate/bisphosphoglycerate mutase, active site	GO:0003824|GO:0004619|GO:0006096|GO:0008152	G3DSA:3.40.50.1240|MF_01040|PF00300|PS00175|PTHR23029|SM00855|SSF53254
yzcX|yzcX|AP_003992.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR016498	Uncharacterised conserved protein UCP006864		PIRSF006864
yzgL|yzgL|AP_004364.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091				
zapA|zapA|AP_003469.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR007838|IPR023771	Cell division protein ZapA, eubacteria|Cell division protein ZapA-like		MF_02012|PF05164|SSF102829
zipA|zipA|AP_003006.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR007449|IPR011919	Cell division protein ZipA|ZipA, C-terminal FtsZ-binding domain	GO:0000917|GO:0007049|GO:0016021	G3DSA:3.30.1400.10|MF_00509|PD035754|PF04354|SM00771|SSF64383|TIGR02205
zitB|zitB|AP_001383.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002524|IPR023500|IPR027469	Cation efflux protein|Cation efflux protein transmembrane domain|Zinc transporter ZitB	GO:0005385|GO:0006812|GO:0006829|GO:0008324|GO:0016020|GO:0016021|GO:0055085	G3DSA:1.20.1510.10|MF_00552|PF01545|PTHR11562|SSF160240|SSF161111|TIGR01297
zntA|zntA|AP_004323.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001757|IPR006121|IPR008250|IPR017969|IPR018303|IPR023214|IPR023299|IPR027256|IPR027265	Cation-transporting P-type ATPase|Cation-transporting P-type ATPase, subfamily IB|Divalent cation-transporting P-type ATPase|HAD-like domain|Heavy metal-associated domain, HMA|Heavy-metal-associated, conserved site|P-type ATPase, A  domain|P-type ATPase, cytoplasmic domain N|P-type ATPase, phosphorylation site	GO:0000166|GO:0006812|GO:0016021|GO:0019829|GO:0030001|GO:0046872	G3DSA:2.70.150.10|G3DSA:3.30.70.100|G3DSA:3.40.1110.10|G3DSA:3.40.50.1000|PF00122|PF00403|PF00702|PR00119|PR00120|PS00154|PS01047|PS50846|PTHR24093|PTHR24093:SF126|SSF55008|SSF56784|SSF81653|SSF81665|TIGR01494|TIGR01512|TIGR01525
zntR|zntR|AP_004498.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR000551|IPR009061|IPR011788|IPR015358	DNA binding domain, putative|Transcription regulator HTH, MerR|Transcription regulator MerR, DNA binding|Zn(II)-responsive transcriptional regulator	GO:0000166|GO:0003700|GO:0006355	G3DSA:1.10.1660.10|PF00376|PF09278|PR00040|PS00552|PS50937|SM00422|SSF46955|TIGR02043
znuA|znuA|AP_002477.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR006127|IPR006128	Adhesion lipoprotein|Periplasmic solute binding protein family	GO:0007155|GO:0030001|GO:0046872	G3DSA:3.40.50.1980|PF01297|PR00690|PTHR30477|PTHR30477:SF1|SSF53807
znuB|znuB|AP_002479.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001626	ABC-3	GO:0005524|GO:0006810|GO:0016020|GO:0042626	G3DSA:1.10.3470.10|PF00950|PTHR30477|PTHR30477:SF0|SSF81345
znuC|znuC|AP_002478.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003439|IPR003593|IPR017882|IPR027417	AAA+ ATPase domain|ABC transporter, zinc import, ATP-binding protein ZnuC|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase	GO:0000166|GO:0005524|GO:0005886|GO:0006829|GO:0015633|GO:0016887|GO:0017111	G3DSA:3.40.50.300|PF00005|PS50893|PS51298|PTHR24220|PTHR24220:SF189|SM00382|SSF52540
zraP|zraP|AP_003816.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR020365|IPR025961	Heavy-metal resistance protein|Zinc resistance-associated protein, ZraP	GO:0008270|GO:0042597	PD097062|PF13801
zraR|zraR|AP_003814.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001789|IPR002078|IPR002197|IPR003593|IPR009057|IPR011006|IPR025662|IPR025943|IPR025944|IPR027417	AAA+ ATPase domain|CheY-like superfamily|DNA binding HTH domain,  Fis-type|Homeodomain-like|P-loop containing nucleoside triphosphate hydrolase|RNA polymerase sigma factor 54 interaction domain|Sigma-54 interaction domain, ATP-binding site 1|Sigma-54 interaction domain, ATP-binding site 2|Sigma-54 interaction domain, conserved site|Signal transduction response regulator, receiver domain	GO:0000156|GO:0000160|GO:0000166|GO:0003677|GO:0003700|GO:0005524|GO:0006355|GO:0008134|GO:0017111	G3DSA:1.10.10.60|G3DSA:1.10.8.60|G3DSA:3.40.50.2300|G3DSA:3.40.50.300|PF00072|PF00158|PF02954|PR01590|PS00675|PS00676|PS00688|PS50045|PS50110|PTHR10919|PTHR10919:SF2|SM00382|SM00448|SSF46689|SSF52172|SSF52540
zraS|zraS|AP_003815.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR003594|IPR003661|IPR004358|IPR005467|IPR009082	Histidine kinase-like ATPase, ATP-binding domain|Signal transduction histidine kinase, core|Signal transduction histidine kinase, homodimeric domain|Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal	GO:0000155|GO:0004871|GO:0005524|GO:0007165|GO:0016020|GO:0016310|GO:0016772	G3DSA:1.10.287.130|G3DSA:3.30.450.20|G3DSA:3.30.565.10|PF00512|PF02518|PR00344|PS50109|PTHR24423|SM00387|SM00388|SSF103190|SSF47384|SSF55874
zupT|zupT|AP_003589.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR004183|IPR014436	Extradiol aromatic ring-opening dioxygenase, DODA type|Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B	GO:0006725|GO:0008198|GO:0008270|GO:0016491|GO:0016701|GO:0055114	G3DSA:3.40.830.10|PF02900|PIRSF006157|PTHR30096|PTHR30096:SF0|SSF53213
zur|zur|AP_004547.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR002481|IPR011991	Ferric-uptake regulator|Winged helix-turn-helix DNA-binding domain	GO:0003700|GO:0006355	G3DSA:1.10.10.10|PF01475|SSF46785
zwf|zwf|AP_002472.1|	/var/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110_uid58567/AC_000091	IPR001282|IPR016040|IPR019796|IPR022674|IPR022675	Glucose-6-phosphate dehydrogenase|Glucose-6-phosphate dehydrogenase, C-terminal|Glucose-6-phosphate dehydrogenase, NAD-binding|Glucose-6-phosphate dehydrogenase, active site|NAD(P)-binding domain	GO:0004345|GO:0006006|GO:0050661|GO:0055114	G3DSA:3.30.360.10|G3DSA:3.40.50.720|PF00479|PF02781|PIRSF000110|PR00079|PS00069|PTHR23429|PTHR23429:SF0|SSF51735|SSF55347|TIGR00871