Ferp_0002	PWY-5198	factor 420 biosynthesis
Ferp_0003	PWY-5198	factor 420 biosynthesis
Ferp_0005	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Ferp_0012	PWY-5194	siroheme biosynthesis
Ferp_0012	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
Ferp_0043	PWY-3781	aerobic respiration I (cytochrome c)
Ferp_0043	PWY-4521	arsenite oxidation I (respiratory)
Ferp_0043	PWY-6692	Fe(II) oxidation
Ferp_0043	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Ferp_0064	PWY-5057	L-valine degradation II
Ferp_0064	PWY-5076	L-leucine degradation III
Ferp_0064	PWY-5078	L-isoleucine degradation II
Ferp_0064	PWY-5101	L-isoleucine biosynthesis II
Ferp_0064	PWY-5103	L-isoleucine biosynthesis III
Ferp_0064	PWY-5104	L-isoleucine biosynthesis IV
Ferp_0064	PWY-5108	L-isoleucine biosynthesis V
Ferp_0067	PWY-6829	tRNA methylation (yeast)
Ferp_0067	PWY-7285	methylwyosine biosynthesis
Ferp_0067	PWY-7286	7-(3-amino-3-carboxypropyl)-wyosine biosynthesis
Ferp_0095	PWY-6610	adenine and adenosine salvage IV
Ferp_0104	PWY-6749	CMP-legionaminate biosynthesis I
Ferp_0116	PWY-5686	UMP biosynthesis
Ferp_0135	PWY-181	photorespiration
Ferp_0142	PWY-6654	phosphopantothenate biosynthesis III
Ferp_0168	PWY-5316	nicotine biosynthesis
Ferp_0168	PWY-5381	pyridine nucleotide cycling (plants)
Ferp_0168	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
Ferp_0168	PWY-7342	superpathway of nicotine biosynthesis
Ferp_0169	PWY-5316	nicotine biosynthesis
Ferp_0169	PWY-7342	superpathway of nicotine biosynthesis
Ferp_0171	PWY-1042	glycolysis IV (plant cytosol)
Ferp_0171	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
Ferp_0171	PWY-5484	glycolysis II (from fructose 6-phosphate)
Ferp_0171	PWY-5723	Rubisco shunt
Ferp_0171	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Ferp_0171	PWY-6886	1-butanol autotrophic biosynthesis
Ferp_0171	PWY-6901	superpathway of glucose and xylose degradation
Ferp_0171	PWY-7003	glycerol degradation to butanol
Ferp_0171	PWY-7124	ethylene biosynthesis V (engineered)
Ferp_0171	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
Ferp_0178	PWY-1361	benzoyl-CoA degradation I (aerobic)
Ferp_0178	PWY-5109	2-methylbutanoate biosynthesis
Ferp_0178	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
Ferp_0178	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
Ferp_0178	PWY-5177	glutaryl-CoA degradation
Ferp_0178	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Ferp_0178	PWY-6435	4-hydroxybenzoate biosynthesis V
Ferp_0178	PWY-6583	pyruvate fermentation to butanol I
Ferp_0178	PWY-6863	pyruvate fermentation to hexanol
Ferp_0178	PWY-6883	pyruvate fermentation to butanol II
Ferp_0178	PWY-6944	androstenedione degradation
Ferp_0178	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
Ferp_0178	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
Ferp_0178	PWY-7007	methyl ketone biosynthesis
Ferp_0178	PWY-7046	4-coumarate degradation (anaerobic)
Ferp_0178	PWY-7094	fatty acid salvage
Ferp_0178	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
Ferp_0178	PWY-735	jasmonic acid biosynthesis
Ferp_0178	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
Ferp_0183	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
Ferp_0183	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
Ferp_0185	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
Ferp_0190	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Ferp_0190	PWY-5723	Rubisco shunt
Ferp_0191	PWY-5381	pyridine nucleotide cycling (plants)
Ferp_0191	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
Ferp_0191	PWY-6596	adenosine nucleotides degradation I
Ferp_0191	PWY-6606	guanosine nucleotides degradation II
Ferp_0191	PWY-6607	guanosine nucleotides degradation I
Ferp_0191	PWY-6608	guanosine nucleotides degradation III
Ferp_0191	PWY-7185	UTP and CTP dephosphorylation I
Ferp_0194	PWY-4983	L-citrulline-nitric oxide cycle
Ferp_0194	PWY-4984	urea cycle
Ferp_0194	PWY-5	canavanine biosynthesis
Ferp_0194	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Ferp_0194	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Ferp_0206	PWY-40	putrescine biosynthesis I
Ferp_0206	PWY-6305	putrescine biosynthesis IV
Ferp_0240	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
Ferp_0240	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
Ferp_0240	PWY-6897	thiamin salvage II
Ferp_0240	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
Ferp_0240	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
Ferp_0240	PWY-7353	4-methyl-5(&beta;-hydroxyethyl)thiazole salvage (yeast)
Ferp_0240	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
Ferp_0241	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
Ferp_0241	PWY-6148	tetrahydromethanopterin biosynthesis
Ferp_0241	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
Ferp_0241	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
Ferp_0264	PWY-5674	nitrate reduction IV (dissimilatory)
Ferp_0277	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Ferp_0277	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Ferp_0288	PWY-5392	reductive TCA cycle II
Ferp_0288	PWY-5537	pyruvate fermentation to acetate V
Ferp_0288	PWY-5538	pyruvate fermentation to acetate VI
Ferp_0288	PWY-5690	TCA cycle II (plants and fungi)
Ferp_0288	PWY-5913	TCA cycle VI (obligate autotrophs)
Ferp_0288	PWY-6728	methylaspartate cycle
Ferp_0288	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Ferp_0288	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Ferp_0317	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Ferp_0317	PWY-5686	UMP biosynthesis
Ferp_0317	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Ferp_0318	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Ferp_0318	PWY-5686	UMP biosynthesis
Ferp_0318	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Ferp_0319	PWY-6123	inosine-5'-phosphate biosynthesis I
Ferp_0319	PWY-6124	inosine-5'-phosphate biosynthesis II
Ferp_0319	PWY-7234	inosine-5'-phosphate biosynthesis III
Ferp_0320	PWY-6123	inosine-5'-phosphate biosynthesis I
Ferp_0320	PWY-7234	inosine-5'-phosphate biosynthesis III
Ferp_0339	PWY-6823	molybdenum cofactor biosynthesis
Ferp_0345	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Ferp_0345	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Ferp_0366	PWY-6349	CDP-archaeol biosynthesis
Ferp_0379	PWY-5686	UMP biosynthesis
Ferp_0382	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
Ferp_0383	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
Ferp_0383	PWY-7177	UTP and CTP dephosphorylation II
Ferp_0383	PWY-7185	UTP and CTP dephosphorylation I
Ferp_0385	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Ferp_0388	PWY-5101	L-isoleucine biosynthesis II
Ferp_0388	PWY-5103	L-isoleucine biosynthesis III
Ferp_0388	PWY-5104	L-isoleucine biosynthesis IV
Ferp_0388	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Ferp_0600	PWY-6160	3-dehydroquinate biosynthesis II (archaea)
Ferp_0602	PWY-5209	methyl-coenzyme M oxidation to CO<sub>2</sub>
Ferp_0604	PWY-5209	methyl-coenzyme M oxidation to CO<sub>2</sub>
Ferp_0606	PWY-1723	formaldehyde oxidation V (H<sub>4</sub>MPT pathway)
Ferp_0608	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
Ferp_0618	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
Ferp_0618	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
Ferp_0618	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Ferp_0618	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
Ferp_0618	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
Ferp_0618	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
Ferp_0618	PWY-7205	CMP phosphorylation
Ferp_0618	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
Ferp_0618	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Ferp_0618	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
Ferp_0618	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Ferp_0618	PWY-7224	purine deoxyribonucleosides salvage
Ferp_0618	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
Ferp_0618	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
Ferp_0628	PWY-5532	adenosine nucleotides degradation IV
Ferp_0656	PWY-3841	folate transformations II
Ferp_0656	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Ferp_0656	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
Ferp_0656	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
Ferp_0656	PWY-7199	pyrimidine deoxyribonucleosides salvage
Ferp_0656	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
Ferp_0670	PWY-5674	nitrate reduction IV (dissimilatory)
Ferp_0672	PWY-5674	nitrate reduction IV (dissimilatory)
Ferp_0674	PWY-5674	nitrate reduction IV (dissimilatory)
Ferp_0675	PWY-5674	nitrate reduction IV (dissimilatory)
Ferp_0676	PWY-5674	nitrate reduction IV (dissimilatory)
Ferp_0712	PWY-5674	nitrate reduction IV (dissimilatory)
Ferp_0724	PWY-4981	L-proline biosynthesis II (from arginine)
Ferp_0724	PWY-4984	urea cycle
Ferp_0724	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Ferp_0726	PWY-3801	sucrose degradation II (sucrose synthase)
Ferp_0726	PWY-5054	sorbitol biosynthesis I
Ferp_0726	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
Ferp_0726	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
Ferp_0726	PWY-5659	GDP-mannose biosynthesis
Ferp_0726	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Ferp_0726	PWY-621	sucrose degradation III (sucrose invertase)
Ferp_0726	PWY-622	starch biosynthesis
Ferp_0726	PWY-6531	mannitol cycle
Ferp_0726	PWY-6981	chitin biosynthesis
Ferp_0726	PWY-7238	sucrose biosynthesis II
Ferp_0726	PWY-7347	sucrose biosynthesis III
Ferp_0726	PWY-7385	1,3-propanediol biosynthesis (engineered)
Ferp_0729	PWY-5209	methyl-coenzyme M oxidation to CO<sub>2</sub>
Ferp_0731	PWY-5372	carbon tetrachloride degradation II
Ferp_0731	PWY-6780	hydrogen production VI
Ferp_0738	PWY-7286	7-(3-amino-3-carboxypropyl)-wyosine biosynthesis
Ferp_0744	PWY-1042	glycolysis IV (plant cytosol)
Ferp_0744	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
Ferp_0744	PWY-5484	glycolysis II (from fructose 6-phosphate)
Ferp_0744	PWY-5723	Rubisco shunt
Ferp_0744	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Ferp_0744	PWY-6886	1-butanol autotrophic biosynthesis
Ferp_0744	PWY-6901	superpathway of glucose and xylose degradation
Ferp_0744	PWY-7003	glycerol degradation to butanol
Ferp_0744	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
Ferp_0744	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
Ferp_0752	PWY-6823	molybdenum cofactor biosynthesis
Ferp_0754	PWY-5663	tetrahydrobiopterin biosynthesis I
Ferp_0754	PWY-5664	tetrahydrobiopterin biosynthesis II
Ferp_0754	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
Ferp_0754	PWY-6703	preQ<sub>0</sub> biosynthesis
Ferp_0754	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
Ferp_0754	PWY-6983	tetrahydrobiopterin biosynthesis III
Ferp_0754	PWY-7442	drosopterin and aurodrosopterin biosynthesis
Ferp_0788	PWY-6672	<i>cis</i>-genanyl-CoA degradation
Ferp_0788	PWY-7118	chitin degradation to ethanol
Ferp_0804	PWY-2941	L-lysine biosynthesis II
Ferp_0804	PWY-2942	L-lysine biosynthesis III
Ferp_0804	PWY-5097	L-lysine biosynthesis VI
Ferp_0804	PWY-6559	spermidine biosynthesis II
Ferp_0804	PWY-6562	norspermidine biosynthesis
Ferp_0804	PWY-7153	grixazone biosynthesis
Ferp_0806	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
Ferp_0808	PWY-2941	L-lysine biosynthesis II
Ferp_0808	PWY-2942	L-lysine biosynthesis III
Ferp_0808	PWY-5097	L-lysine biosynthesis VI
Ferp_0809	PWY-5097	L-lysine biosynthesis VI
Ferp_0811	PWY-5532	adenosine nucleotides degradation IV
Ferp_0861	PWY-40	putrescine biosynthesis I
Ferp_0861	PWY-43	putrescine biosynthesis II
Ferp_0861	PWY-6305	putrescine biosynthesis IV
Ferp_0861	PWY-6834	spermidine biosynthesis III
Ferp_0862	PWY-5913	TCA cycle VI (obligate autotrophs)
Ferp_0862	PWY-6549	L-glutamine biosynthesis III
Ferp_0862	PWY-6728	methylaspartate cycle
Ferp_0862	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Ferp_0862	PWY-7124	ethylene biosynthesis V (engineered)
Ferp_0862	PWY-7254	TCA cycle VII (acetate-producers)
Ferp_0862	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
Ferp_0879	PWY-4983	L-citrulline-nitric oxide cycle
Ferp_0879	PWY-4984	urea cycle
Ferp_0879	PWY-5	canavanine biosynthesis
Ferp_0879	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Ferp_0879	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Ferp_0887	PWY-5199	factor 420 polyglutamylation
Ferp_0897	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
Ferp_0897	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
Ferp_0897	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
Ferp_0898	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Ferp_0903	PWY-6829	tRNA methylation (yeast)
Ferp_0917	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Ferp_0917	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
Ferp_0919	PWY-6167	flavin biosynthesis II (archaea)
Ferp_0919	PWY-6168	flavin biosynthesis III (fungi)
Ferp_0920	PWY-6167	flavin biosynthesis II (archaea)
Ferp_0927	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Ferp_0927	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Ferp_0934	PWY-7234	inosine-5'-phosphate biosynthesis III
Ferp_0941	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Ferp_0941	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Ferp_0952	PWY-6308	L-cysteine biosynthesis II (tRNA-dependent)
Ferp_0953	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
Ferp_0960	PWY-5198	factor 420 biosynthesis
Ferp_0974	PWY-2301	<i>myo</i>-inositol biosynthesis
Ferp_0974	PWY-4661	1D-<i>myo</i>-inositol hexakisphosphate biosynthesis III (<i>Spirodela polyrrhiza</i>)
Ferp_0974	PWY-6372	1D-<i>myo</i>-inositol hexakisphosphate biosynthesis IV (<i>Dictyostelium</i>)
Ferp_0974	PWY-6580	phosphatidylinositol biosynthesis I (bacteria)
Ferp_0974	PWY-6664	di-myo-inositol phosphate biosynthesis
Ferp_0977	PWY-4381	fatty acid biosynthesis initiation I
Ferp_0995	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
Ferp_0995	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Ferp_0995	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
Ferp_0995	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
Ferp_0995	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Ferp_0995	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Ferp_0995	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
Ferp_0995	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
Ferp_0997	PWY-6637	sulfolactate degradation II
Ferp_0997	PWY-6643	coenzyme M biosynthesis II
Ferp_1002	PWY-1361	benzoyl-CoA degradation I (aerobic)
Ferp_1002	PWY-5109	2-methylbutanoate biosynthesis
Ferp_1002	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
Ferp_1002	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
Ferp_1002	PWY-5177	glutaryl-CoA degradation
Ferp_1002	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Ferp_1002	PWY-6435	4-hydroxybenzoate biosynthesis V
Ferp_1002	PWY-6583	pyruvate fermentation to butanol I
Ferp_1002	PWY-6863	pyruvate fermentation to hexanol
Ferp_1002	PWY-6883	pyruvate fermentation to butanol II
Ferp_1002	PWY-6944	androstenedione degradation
Ferp_1002	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
Ferp_1002	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
Ferp_1002	PWY-7007	methyl ketone biosynthesis
Ferp_1002	PWY-7046	4-coumarate degradation (anaerobic)
Ferp_1002	PWY-7094	fatty acid salvage
Ferp_1002	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
Ferp_1002	PWY-735	jasmonic acid biosynthesis
Ferp_1002	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
Ferp_1014	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Ferp_1014	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
Ferp_1014	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
Ferp_1018	PWY-5198	factor 420 biosynthesis
Ferp_1022	PWY-6711	archaeosine biosynthesis
Ferp_1028	PWY-6654	phosphopantothenate biosynthesis III
Ferp_1035	PWY-1361	benzoyl-CoA degradation I (aerobic)
Ferp_1035	PWY-5109	2-methylbutanoate biosynthesis
Ferp_1035	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
Ferp_1035	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
Ferp_1035	PWY-5177	glutaryl-CoA degradation
Ferp_1035	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Ferp_1035	PWY-6435	4-hydroxybenzoate biosynthesis V
Ferp_1035	PWY-6583	pyruvate fermentation to butanol I
Ferp_1035	PWY-6863	pyruvate fermentation to hexanol
Ferp_1035	PWY-6883	pyruvate fermentation to butanol II
Ferp_1035	PWY-6944	androstenedione degradation
Ferp_1035	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
Ferp_1035	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
Ferp_1035	PWY-7007	methyl ketone biosynthesis
Ferp_1035	PWY-7046	4-coumarate degradation (anaerobic)
Ferp_1035	PWY-7094	fatty acid salvage
Ferp_1035	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
Ferp_1035	PWY-735	jasmonic acid biosynthesis
Ferp_1035	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
Ferp_1054	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
Ferp_1054	PWY-5912	2'-deoxymugineic acid phytosiderophore biosynthesis
Ferp_1104	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Ferp_1122	PWY-6823	molybdenum cofactor biosynthesis
Ferp_1122	PWY-6891	thiazole biosynthesis II (Bacillus)
Ferp_1122	PWY-6892	thiazole biosynthesis I (E. coli)
Ferp_1122	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
Ferp_1126	PWY-1042	glycolysis IV (plant cytosol)
Ferp_1126	PWY-5484	glycolysis II (from fructose 6-phosphate)
Ferp_1126	PWY-6886	1-butanol autotrophic biosynthesis
Ferp_1126	PWY-6901	superpathway of glucose and xylose degradation
Ferp_1126	PWY-7003	glycerol degradation to butanol
Ferp_1128	PWY-2941	L-lysine biosynthesis II
Ferp_1128	PWY-2942	L-lysine biosynthesis III
Ferp_1128	PWY-5097	L-lysine biosynthesis VI
Ferp_1128	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Ferp_1128	PWY-6559	spermidine biosynthesis II
Ferp_1128	PWY-6562	norspermidine biosynthesis
Ferp_1128	PWY-7153	grixazone biosynthesis
Ferp_1128	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Ferp_1161	PWY-7205	CMP phosphorylation
Ferp_1228	PWY-1341	phenylacetate degradation II (anaerobic)
Ferp_1228	PWY-6318	L-phenylalanine degradation IV (mammalian, via side chain)
Ferp_1234	PWY-6689	tRNA splicing
Ferp_1241	PWY-5392	reductive TCA cycle II
Ferp_1241	PWY-5537	pyruvate fermentation to acetate V
Ferp_1241	PWY-5538	pyruvate fermentation to acetate VI
Ferp_1241	PWY-5690	TCA cycle II (plants and fungi)
Ferp_1241	PWY-5913	TCA cycle VI (obligate autotrophs)
Ferp_1241	PWY-6728	methylaspartate cycle
Ferp_1241	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Ferp_1241	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Ferp_1242	PWY-5392	reductive TCA cycle II
Ferp_1242	PWY-5537	pyruvate fermentation to acetate V
Ferp_1242	PWY-5538	pyruvate fermentation to acetate VI
Ferp_1242	PWY-5690	TCA cycle II (plants and fungi)
Ferp_1242	PWY-5913	TCA cycle VI (obligate autotrophs)
Ferp_1242	PWY-6728	methylaspartate cycle
Ferp_1242	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Ferp_1242	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Ferp_1243	PWY-3781	aerobic respiration I (cytochrome c)
Ferp_1243	PWY-4302	aerobic respiration III (alternative oxidase pathway)
Ferp_1243	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
Ferp_1243	PWY-5690	TCA cycle II (plants and fungi)
Ferp_1243	PWY-6728	methylaspartate cycle
Ferp_1243	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Ferp_1243	PWY-7254	TCA cycle VII (acetate-producers)
Ferp_1243	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Ferp_1244	PWY-3781	aerobic respiration I (cytochrome c)
Ferp_1244	PWY-4302	aerobic respiration III (alternative oxidase pathway)
Ferp_1244	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
Ferp_1244	PWY-5690	TCA cycle II (plants and fungi)
Ferp_1244	PWY-6728	methylaspartate cycle
Ferp_1244	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Ferp_1244	PWY-7254	TCA cycle VII (acetate-producers)
Ferp_1244	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Ferp_1247	PWY-6823	molybdenum cofactor biosynthesis
Ferp_1249	PWY-6654	phosphopantothenate biosynthesis III
Ferp_1264	PWY-6167	flavin biosynthesis II (archaea)
Ferp_1264	PWY-6168	flavin biosynthesis III (fungi)
Ferp_1277	PWY-7206	pyrimidine deoxyribonucleotides dephosphorylation
Ferp_1281	PWY-2941	L-lysine biosynthesis II
Ferp_1281	PWY-2942	L-lysine biosynthesis III
Ferp_1281	PWY-5097	L-lysine biosynthesis VI
Ferp_1308	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
Ferp_1308	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Ferp_1308	PWY-7185	UTP and CTP dephosphorylation I
Ferp_1308	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
Ferp_1308	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
Ferp_1309	PWY-6829	tRNA methylation (yeast)
Ferp_1337	PWY-4361	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation
Ferp_1337	PWY-7174	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation II
Ferp_1340	PWY-3781	aerobic respiration I (cytochrome c)
Ferp_1340	PWY-4521	arsenite oxidation I (respiratory)
Ferp_1340	PWY-6692	Fe(II) oxidation
Ferp_1340	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Ferp_1355	PWY-5686	UMP biosynthesis
Ferp_1374	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
Ferp_1381	PWY-3821	galactose degradation III
Ferp_1381	PWY-6174	mevalonate pathway II (archaea)
Ferp_1381	PWY-6317	galactose degradation I (Leloir pathway)
Ferp_1381	PWY-6527	stachyose degradation
Ferp_1381	PWY-7391	isoprene biosynthesis II (engineered)
Ferp_1381	PWY-922	mevalonate pathway I
Ferp_1382	PWY-6174	mevalonate pathway II (archaea)
Ferp_1382	PWY-7524	mevalonate pathway III (archaea)
Ferp_1384	PWY-6938	NADH repair
Ferp_1388	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Ferp_1388	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Ferp_1396	PWY-6829	tRNA methylation (yeast)
Ferp_1396	PWY-7285	methylwyosine biosynthesis
Ferp_1396	PWY-7286	7-(3-amino-3-carboxypropyl)-wyosine biosynthesis
Ferp_1397	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
Ferp_1397	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
Ferp_1408	PWY-5669	phosphatidylethanolamine biosynthesis I
Ferp_1410	PWY-5101	L-isoleucine biosynthesis II
Ferp_1410	PWY-6871	3-methylbutanol biosynthesis
Ferp_1412	PWY-6785	hydrogen production VIII
Ferp_1421	PWY-5667	CDP-diacylglycerol biosynthesis I
Ferp_1421	PWY-5981	CDP-diacylglycerol biosynthesis III
Ferp_1436	PWY-40	putrescine biosynthesis I
Ferp_1436	PWY-43	putrescine biosynthesis II
Ferp_1436	PWY-6305	putrescine biosynthesis IV
Ferp_1436	PWY-6834	spermidine biosynthesis III
Ferp_1441	PWY-6703	preQ<sub>0</sub> biosynthesis
Ferp_1442	PWY-6703	preQ<sub>0</sub> biosynthesis
Ferp_1481	PWY-6482	diphthamide biosynthesis (archaea)
Ferp_1490	PWY-5392	reductive TCA cycle II
Ferp_1490	PWY-5537	pyruvate fermentation to acetate V
Ferp_1490	PWY-5538	pyruvate fermentation to acetate VI
Ferp_1490	PWY-5690	TCA cycle II (plants and fungi)
Ferp_1490	PWY-5913	TCA cycle VI (obligate autotrophs)
Ferp_1490	PWY-6728	methylaspartate cycle
Ferp_1490	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Ferp_1490	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Ferp_1501	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Ferp_1503	PWY-5123	<i>trans, trans</i>-farnesyl diphosphate biosynthesis
Ferp_1503	PWY-6174	mevalonate pathway II (archaea)
Ferp_1503	PWY-6383	mono-<i>trans</i>, poly-<i>cis</i> decaprenyl phosphate biosynthesis
Ferp_1503	PWY-6859	<i>all-trans</i>-farnesol biosynthesis
Ferp_1503	PWY-7102	bisabolene biosynthesis
Ferp_1503	PWY-7391	isoprene biosynthesis II (engineered)
Ferp_1503	PWY-7524	mevalonate pathway III (archaea)
Ferp_1503	PWY-7560	methylerythritol phosphate pathway II
Ferp_1503	PWY-922	mevalonate pathway I
Ferp_1506	PWY-5532	adenosine nucleotides degradation IV
Ferp_1506	PWY-5723	Rubisco shunt
Ferp_1508	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Ferp_1508	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
Ferp_1508	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
Ferp_1509	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Ferp_1509	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
Ferp_1509	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
Ferp_1510	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Ferp_1510	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
Ferp_1510	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
Ferp_1521	PWY-5381	pyridine nucleotide cycling (plants)
Ferp_1542	PWY-6174	mevalonate pathway II (archaea)
Ferp_1542	PWY-7391	isoprene biosynthesis II (engineered)
Ferp_1542	PWY-7524	mevalonate pathway III (archaea)
Ferp_1542	PWY-922	mevalonate pathway I
Ferp_1551	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
Ferp_1551	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
Ferp_1551	PWY-6896	thiamin salvage I
Ferp_1551	PWY-6897	thiamin salvage II
Ferp_1569	PWY-5101	L-isoleucine biosynthesis II
Ferp_1569	PWY-5103	L-isoleucine biosynthesis III
Ferp_1569	PWY-5104	L-isoleucine biosynthesis IV
Ferp_1569	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Ferp_1580	PWY-5743	3-hydroxypropanoate cycle
Ferp_1580	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Ferp_1580	PWY-6728	methylaspartate cycle
Ferp_1580	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Ferp_1595	PWY-1042	glycolysis IV (plant cytosol)
Ferp_1595	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
Ferp_1595	PWY-5484	glycolysis II (from fructose 6-phosphate)
Ferp_1595	PWY-5723	Rubisco shunt
Ferp_1595	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Ferp_1595	PWY-6886	1-butanol autotrophic biosynthesis
Ferp_1595	PWY-6901	superpathway of glucose and xylose degradation
Ferp_1595	PWY-7003	glycerol degradation to butanol
Ferp_1595	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
Ferp_1595	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
Ferp_1608	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
Ferp_1608	PWY-6148	tetrahydromethanopterin biosynthesis
Ferp_1608	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
Ferp_1608	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
Ferp_1619	PWY-6167	flavin biosynthesis II (archaea)
Ferp_1619	PWY-6168	flavin biosynthesis III (fungi)
Ferp_1619	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
Ferp_1624	PWY-3581	(<i>S</i>)-reticuline biosynthesis I
Ferp_1624	PWY-5254	methanofuran biosynthesis
Ferp_1624	PWY-5474	hydroxycinnamic acid tyramine amides biosynthesis
Ferp_1624	PWY-6133	(S)-reticuline biosynthesis II
Ferp_1624	PWY-6802	salidroside biosynthesis
Ferp_1624	PWY-7297	octopamine biosynthesis
Ferp_1625	PWY-5964	guanylyl molybdenum cofactor biosynthesis
Ferp_1626	PWY-6823	molybdenum cofactor biosynthesis
Ferp_1629	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Ferp_1659	PWY-5723	Rubisco shunt
Ferp_1659	PWY-7193	pyrimidine ribonucleosides salvage I
Ferp_1660	PWY-3861	mannitol degradation II
Ferp_1660	PWY-3881	mannitol biosynthesis
Ferp_1660	PWY-5659	GDP-mannose biosynthesis
Ferp_1660	PWY-7456	mannan degradation
Ferp_1660	PWY-882	L-ascorbate biosynthesis I (L-galactose pathway)
Ferp_1664	PWY-381	nitrate reduction II (assimilatory)
Ferp_1664	PWY-5675	nitrate reduction V (assimilatory)
Ferp_1664	PWY-6549	L-glutamine biosynthesis III
Ferp_1664	PWY-6963	ammonia assimilation cycle I
Ferp_1664	PWY-6964	ammonia assimilation cycle II
Ferp_1676	PWY-6167	flavin biosynthesis II (archaea)
Ferp_1676	PWY-6168	flavin biosynthesis III (fungi)
Ferp_1715	PWY-5663	tetrahydrobiopterin biosynthesis I
Ferp_1715	PWY-5664	tetrahydrobiopterin biosynthesis II
Ferp_1715	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
Ferp_1715	PWY-6703	preQ<sub>0</sub> biosynthesis
Ferp_1715	PWY-6983	tetrahydrobiopterin biosynthesis III
Ferp_1715	PWY-7442	drosopterin and aurodrosopterin biosynthesis
Ferp_1724	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
Ferp_1724	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
Ferp_1734	PWY-1622	formaldehyde assimilation I (serine pathway)
Ferp_1734	PWY-181	photorespiration
Ferp_1734	PWY-2161	folate polyglutamylation
Ferp_1734	PWY-2201	folate transformations I
Ferp_1734	PWY-3661	glycine betaine degradation I
Ferp_1734	PWY-3661-1	glycine betaine degradation II (mammalian)
Ferp_1734	PWY-3841	folate transformations II
Ferp_1734	PWY-5497	purine nucleobases degradation II (anaerobic)
Ferp_1735	PWY-1723	formaldehyde oxidation V (H<sub>4</sub>MPT pathway)
Ferp_1735	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Ferp_1736	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
Ferp_1736	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
Ferp_1736	PWY-6269	adenosylcobalamin salvage from cobinamide II
Ferp_1746	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
Ferp_1746	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
Ferp_1753	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
Ferp_1753	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
Ferp_1753	PWY-6268	adenosylcobalamin salvage from cobalamin
Ferp_1753	PWY-6269	adenosylcobalamin salvage from cobinamide II
Ferp_1758	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
Ferp_1758	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
Ferp_1761	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
Ferp_1761	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
Ferp_1768	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Ferp_1769	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Ferp_1769	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
Ferp_1770	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Ferp_1771	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Ferp_1771	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
Ferp_1772	PWY-5194	siroheme biosynthesis
Ferp_1772	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
Ferp_1811	PWY-6700	queuosine biosynthesis
Ferp_1811	PWY-6711	archaeosine biosynthesis
Ferp_1812	PWY-6700	queuosine biosynthesis
Ferp_1821	PWY-5198	factor 420 biosynthesis
Ferp_1822	PWY-7234	inosine-5'-phosphate biosynthesis III
Ferp_1832	PWY-5743	3-hydroxypropanoate cycle
Ferp_1832	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Ferp_1832	PWY-6728	methylaspartate cycle
Ferp_1832	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Ferp_1833	PWY-4381	fatty acid biosynthesis initiation I
Ferp_1833	PWY-5743	3-hydroxypropanoate cycle
Ferp_1833	PWY-5744	glyoxylate assimilation
Ferp_1833	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Ferp_1833	PWY-6679	jadomycin biosynthesis
Ferp_1833	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Ferp_1836	PWY-5743	3-hydroxypropanoate cycle
Ferp_1836	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Ferp_1836	PWY-6728	methylaspartate cycle
Ferp_1836	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Ferp_1844	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Ferp_1844	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
Ferp_1844	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
Ferp_1844	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
Ferp_1871	PWY-3341	L-proline biosynthesis III
Ferp_1871	PWY-4981	L-proline biosynthesis II (from arginine)
Ferp_1871	PWY-6344	L-ornithine degradation II (Stickland reaction)
Ferp_1876	PWY-6683	sulfate reduction III (assimilatory)
Ferp_1879	PWY-6834	spermidine biosynthesis III
Ferp_1892	PWY-5198	factor 420 biosynthesis
Ferp_1893	PWY-7371	1,4-dihydroxy-6-naphthoate biosynthesis II
Ferp_1893	PWY-7374	1,4-dihydroxy-6-naphthoate biosynthesis I
Ferp_1894	PWY-5198	factor 420 biosynthesis
Ferp_1898	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Ferp_1899	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Ferp_1927	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
Ferp_1927	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
Ferp_1927	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
Ferp_1934	PWY-5796	malonate decarboxylase activation
Ferp_1936	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
Ferp_1936	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
Ferp_1936	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
Ferp_1942	PWY-1361	benzoyl-CoA degradation I (aerobic)
Ferp_1942	PWY-5109	2-methylbutanoate biosynthesis
Ferp_1942	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
Ferp_1942	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
Ferp_1942	PWY-5177	glutaryl-CoA degradation
Ferp_1942	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Ferp_1942	PWY-6435	4-hydroxybenzoate biosynthesis V
Ferp_1942	PWY-6583	pyruvate fermentation to butanol I
Ferp_1942	PWY-6863	pyruvate fermentation to hexanol
Ferp_1942	PWY-6883	pyruvate fermentation to butanol II
Ferp_1942	PWY-6944	androstenedione degradation
Ferp_1942	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
Ferp_1942	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
Ferp_1942	PWY-7007	methyl ketone biosynthesis
Ferp_1942	PWY-7046	4-coumarate degradation (anaerobic)
Ferp_1942	PWY-7094	fatty acid salvage
Ferp_1942	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
Ferp_1942	PWY-735	jasmonic acid biosynthesis
Ferp_1942	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
Ferp_1946	PWY-1341	phenylacetate degradation II (anaerobic)
Ferp_1946	PWY-6318	L-phenylalanine degradation IV (mammalian, via side chain)
Ferp_1948	PWY-6823	molybdenum cofactor biosynthesis
Ferp_1960	PWY-1042	glycolysis IV (plant cytosol)
Ferp_1960	PWY-1622	formaldehyde assimilation I (serine pathway)
Ferp_1960	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
Ferp_1960	PWY-5484	glycolysis II (from fructose 6-phosphate)
Ferp_1960	PWY-5723	Rubisco shunt
Ferp_1960	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Ferp_1960	PWY-6886	1-butanol autotrophic biosynthesis
Ferp_1960	PWY-6901	superpathway of glucose and xylose degradation
Ferp_1960	PWY-7003	glycerol degradation to butanol
Ferp_1960	PWY-7124	ethylene biosynthesis V (engineered)
Ferp_1960	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
Ferp_1974	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
Ferp_1974	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
Ferp_1974	PWY-6269	adenosylcobalamin salvage from cobinamide II
Ferp_1978	PWY-6482	diphthamide biosynthesis (archaea)
Ferp_1978	PWY-7546	diphthamide biosynthesis (eukaryotes)
Ferp_1982	PWY-1281	sulfoacetaldehyde degradation I
Ferp_1982	PWY-5482	pyruvate fermentation to acetate II
Ferp_1982	PWY-5485	pyruvate fermentation to acetate IV
Ferp_1982	PWY-5497	purine nucleobases degradation II (anaerobic)
Ferp_1982	PWY-6637	sulfolactate degradation II
Ferp_1988	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Ferp_1993	PWY-5659	GDP-mannose biosynthesis
Ferp_1993	PWY-6073	alginate biosynthesis I (algal)
Ferp_1993	PWY-6082	alginate biosynthesis II (bacterial)
Ferp_1993	PWY-882	L-ascorbate biosynthesis I (L-galactose pathway)
Ferp_1996	PWY-5958	acridone alkaloid biosynthesis
Ferp_1996	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
Ferp_1996	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
Ferp_1997	PWY-5958	acridone alkaloid biosynthesis
Ferp_1997	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
Ferp_1997	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
Ferp_2001	PWY-1622	formaldehyde assimilation I (serine pathway)
Ferp_2001	PWY-5392	reductive TCA cycle II
Ferp_2001	PWY-5481	pyruvate fermentation to lactate
Ferp_2001	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
Ferp_2001	PWY-5690	TCA cycle II (plants and fungi)
Ferp_2001	PWY-5913	TCA cycle VI (obligate autotrophs)
Ferp_2001	PWY-6728	methylaspartate cycle
Ferp_2001	PWY-6901	superpathway of glucose and xylose degradation
Ferp_2001	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Ferp_2001	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
Ferp_2001	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
Ferp_2002	PWY-6466	pyridoxal 5'-phosphate biosynthesis II
Ferp_2002	PWY-6891	thiazole biosynthesis II (Bacillus)
Ferp_2002	PWY-6892	thiazole biosynthesis I (E. coli)
Ferp_2003	PWY-6466	pyridoxal 5'-phosphate biosynthesis II
Ferp_2010	PWY-1042	glycolysis IV (plant cytosol)
Ferp_2010	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
Ferp_2010	PWY-5484	glycolysis II (from fructose 6-phosphate)
Ferp_2010	PWY-5723	Rubisco shunt
Ferp_2010	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Ferp_2010	PWY-6886	1-butanol autotrophic biosynthesis
Ferp_2010	PWY-6901	superpathway of glucose and xylose degradation
Ferp_2010	PWY-7003	glycerol degradation to butanol
Ferp_2010	PWY-7124	ethylene biosynthesis V (engineered)
Ferp_2010	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
Ferp_2013	PWY-5686	UMP biosynthesis
Ferp_2022	PWY-6349	CDP-archaeol biosynthesis
Ferp_2023	PWY-6308	L-cysteine biosynthesis II (tRNA-dependent)
Ferp_2027	PWY-7285	methylwyosine biosynthesis
Ferp_2027	PWY-7286	7-(3-amino-3-carboxypropyl)-wyosine biosynthesis
Ferp_2029	PWY-2941	L-lysine biosynthesis II
Ferp_2029	PWY-2942	L-lysine biosynthesis III
Ferp_2029	PWY-5097	L-lysine biosynthesis VI
Ferp_2060	PWY-1622	formaldehyde assimilation I (serine pathway)
Ferp_2060	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
Ferp_2060	PWY-5913	TCA cycle VI (obligate autotrophs)
Ferp_2060	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Ferp_2060	PWY-6146	<i>Methanobacterium thermoautotrophicum</i> biosynthetic metabolism
Ferp_2060	PWY-6549	L-glutamine biosynthesis III
Ferp_2060	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
Ferp_2060	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
Ferp_2060	PWY-7124	ethylene biosynthesis V (engineered)
Ferp_2093	PWY-2941	L-lysine biosynthesis II
Ferp_2093	PWY-5097	L-lysine biosynthesis VI
Ferp_2102	PWY-6823	molybdenum cofactor biosynthesis
Ferp_2108	PWY-6482	diphthamide biosynthesis (archaea)
Ferp_2108	PWY-7546	diphthamide biosynthesis (eukaryotes)
Ferp_2110	PWY-5484	glycolysis II (from fructose 6-phosphate)
Ferp_2128	PWY-1042	glycolysis IV (plant cytosol)
Ferp_2128	PWY-5484	glycolysis II (from fructose 6-phosphate)
Ferp_2128	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Ferp_2128	PWY-7003	glycerol degradation to butanol
Ferp_2129	PWY-1723	formaldehyde oxidation V (H<sub>4</sub>MPT pathway)
Ferp_2129	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Ferp_2129	PWY-5686	UMP biosynthesis
Ferp_2131	PWY-5194	siroheme biosynthesis
Ferp_2131	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
Ferp_2137	PWY-6148	tetrahydromethanopterin biosynthesis
Ferp_2152	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
Ferp_2162	PWY-5101	L-isoleucine biosynthesis II
Ferp_2162	PWY-5103	L-isoleucine biosynthesis III
Ferp_2162	PWY-5104	L-isoleucine biosynthesis IV
Ferp_2162	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
Ferp_2162	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
Ferp_2162	PWY-6389	(<i>S</i>)-acetoin biosynthesis
Ferp_2162	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Ferp_2163	PWY-5101	L-isoleucine biosynthesis II
Ferp_2163	PWY-5103	L-isoleucine biosynthesis III
Ferp_2163	PWY-5104	L-isoleucine biosynthesis IV
Ferp_2163	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
Ferp_2163	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
Ferp_2163	PWY-6389	(<i>S</i>)-acetoin biosynthesis
Ferp_2163	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Ferp_2170	PWY-6840	homoglutathione biosynthesis
Ferp_2170	PWY-7255	ergothioneine biosynthesis I (bacteria)
Ferp_2181	PWY-6349	CDP-archaeol biosynthesis
Ferp_2198	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Ferp_2198	PWY-5686	UMP biosynthesis
Ferp_2204	PWY-6167	flavin biosynthesis II (archaea)
Ferp_2204	PWY-6168	flavin biosynthesis III (fungi)
Ferp_2205	PWY-6832	2-aminoethylphosphonate degradation II
Ferp_2216	PWY-5278	sulfite oxidation III
Ferp_2216	PWY-5340	sulfate activation for sulfonation
Ferp_2216	PWY-6683	sulfate reduction III (assimilatory)
Ferp_2216	PWY-6932	selenate reduction
Ferp_2220	PWY-6683	sulfate reduction III (assimilatory)
Ferp_2233	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Ferp_2233	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
Ferp_2233	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
Ferp_2236	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Ferp_2236	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Ferp_2241	PWY-6829	tRNA methylation (yeast)
Ferp_2241	PWY-7285	methylwyosine biosynthesis
Ferp_2241	PWY-7286	7-(3-amino-3-carboxypropyl)-wyosine biosynthesis
Ferp_2247	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
Ferp_2247	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
Ferp_2247	PWY-6896	thiamin salvage I
Ferp_2247	PWY-6897	thiamin salvage II
Ferp_2248	PWY-6160	3-dehydroquinate biosynthesis II (archaea)
Ferp_2249	PWY-6160	3-dehydroquinate biosynthesis II (archaea)
Ferp_2250	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Ferp_2250	PWY-6416	quinate degradation II
Ferp_2250	PWY-6707	gallate biosynthesis
Ferp_2251	PWY-3461	L-tyrosine biosynthesis II
Ferp_2251	PWY-3462	L-phenylalanine biosynthesis II
Ferp_2251	PWY-6120	L-tyrosine biosynthesis III
Ferp_2251	PWY-6627	salinosporamide A biosynthesis
Ferp_2251	PWY-7432	L-phenylalanine biosynthesis III (cytosolic, plants)
Ferp_2261	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
Ferp_2261	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Ferp_2261	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
Ferp_2261	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
Ferp_2261	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
Ferp_2261	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
Ferp_2274	PWY-5194	siroheme biosynthesis
Ferp_2274	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
Ferp_2275	PWY-5194	siroheme biosynthesis
Ferp_2275	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
Ferp_2276	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
Ferp_2279	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
Ferp_2282	PWY-6823	molybdenum cofactor biosynthesis
Ferp_2288	PWY-6871	3-methylbutanol biosynthesis
Ferp_2303	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Ferp_2304	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Ferp_2312	PWY-1341	phenylacetate degradation II (anaerobic)
Ferp_2312	PWY-6318	L-phenylalanine degradation IV (mammalian, via side chain)
Ferp_2322	PWY-1361	benzoyl-CoA degradation I (aerobic)
Ferp_2322	PWY-5109	2-methylbutanoate biosynthesis
Ferp_2322	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
Ferp_2322	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
Ferp_2322	PWY-5177	glutaryl-CoA degradation
Ferp_2322	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Ferp_2322	PWY-6435	4-hydroxybenzoate biosynthesis V
Ferp_2322	PWY-6583	pyruvate fermentation to butanol I
Ferp_2322	PWY-6863	pyruvate fermentation to hexanol
Ferp_2322	PWY-6883	pyruvate fermentation to butanol II
Ferp_2322	PWY-6944	androstenedione degradation
Ferp_2322	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
Ferp_2322	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
Ferp_2322	PWY-7007	methyl ketone biosynthesis
Ferp_2322	PWY-7046	4-coumarate degradation (anaerobic)
Ferp_2322	PWY-7094	fatty acid salvage
Ferp_2322	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
Ferp_2322	PWY-735	jasmonic acid biosynthesis
Ferp_2322	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
Ferp_2331	PWY-5743	3-hydroxypropanoate cycle
Ferp_2331	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Ferp_2331	PWY-6728	methylaspartate cycle
Ferp_2331	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Ferp_2343	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Ferp_2369	PWY-5372	carbon tetrachloride degradation II
Ferp_2369	PWY-6780	hydrogen production VI
Ferp_2373	PWY-6749	CMP-legionaminate biosynthesis I
Ferp_2374	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
Ferp_2375	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
Ferp_2384	PWY-7346	UDP-&alpha;-D-glucuronate biosynthesis (from UDP-glucose)
Ferp_2387	PWY-3801	sucrose degradation II (sucrose synthase)
Ferp_2387	PWY-6527	stachyose degradation
Ferp_2387	PWY-6981	chitin biosynthesis
Ferp_2387	PWY-7238	sucrose biosynthesis II
Ferp_2387	PWY-7343	UDP-glucose biosynthesis
Ferp_2429	PWY-5340	sulfate activation for sulfonation
Ferp_2432	PWY-5278	sulfite oxidation III
Ferp_2432	PWY-5340	sulfate activation for sulfonation
Ferp_2432	PWY-6683	sulfate reduction III (assimilatory)
Ferp_2432	PWY-6932	selenate reduction
Ferp_2440	PWY-6123	inosine-5'-phosphate biosynthesis I
Ferp_2440	PWY-6124	inosine-5'-phosphate biosynthesis II
Ferp_2440	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Ferp_2440	PWY-7234	inosine-5'-phosphate biosynthesis III
Ferp_2447	PWY-6167	flavin biosynthesis II (archaea)
Ferp_2447	PWY-6168	flavin biosynthesis III (fungi)
Ferp_2476	PWY-4361	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation
Ferp_2476	PWY-5532	adenosine nucleotides degradation IV
Ferp_2476	PWY-7174	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation II
Ferp_2496	PWY-6890	4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis
Ferp_2562	PWY-5372	carbon tetrachloride degradation II
Ferp_2562	PWY-6780	hydrogen production VI
