Fphi_0005	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Fphi_0011	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Fphi_0012	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Fphi_0012	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Fphi_0018	PWY-6906	chitin derivatives degradation
Fphi_0018	PWY-7077	<i>N</i>-acetyl-D-galactosamine degradation
Fphi_0018	PWY-7395	D-galactosamine and <i>N</i>-acetyl-D-galactosamine degradation
Fphi_0021	PWY-7199	pyrimidine deoxyribonucleosides salvage
Fphi_0034	PWY-7560	methylerythritol phosphate pathway II
Fphi_0035	PWY-5663	tetrahydrobiopterin biosynthesis I
Fphi_0035	PWY-5664	tetrahydrobiopterin biosynthesis II
Fphi_0035	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
Fphi_0035	PWY-6703	preQ<sub>0</sub> biosynthesis
Fphi_0035	PWY-6983	tetrahydrobiopterin biosynthesis III
Fphi_0035	PWY-7442	drosopterin and aurodrosopterin biosynthesis
Fphi_0036	PWY-6902	chitin degradation II
Fphi_0037	PWY-6902	chitin degradation II
Fphi_0050	PWY-4041	&gamma;-glutamyl cycle
Fphi_0050	PWY-5826	hypoglycin biosynthesis
Fphi_0087	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
Fphi_0087	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
Fphi_0087	PWY-6897	thiamin salvage II
Fphi_0087	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
Fphi_0087	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
Fphi_0087	PWY-6910	hydroxymethylpyrimidine salvage
Fphi_0087	PWY-7353	4-methyl-5(&beta;-hydroxyethyl)thiazole salvage (yeast)
Fphi_0087	PWY-7356	thiamin salvage IV (yeast)
Fphi_0087	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
Fphi_0088	PWY-6891	thiazole biosynthesis II (Bacillus)
Fphi_0088	PWY-6892	thiazole biosynthesis I (E. coli)
Fphi_0090	PWY-6890	4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis
Fphi_0091	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Fphi_0091	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Fphi_0102	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Fphi_0102	PWY-5723	Rubisco shunt
Fphi_0114	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
Fphi_0114	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
Fphi_0114	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
Fphi_0114	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
Fphi_0125	PWY-6823	molybdenum cofactor biosynthesis
Fphi_0125	PWY-6891	thiazole biosynthesis II (Bacillus)
Fphi_0125	PWY-6892	thiazole biosynthesis I (E. coli)
Fphi_0125	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
Fphi_0129	PWY-7432	L-phenylalanine biosynthesis III (cytosolic, plants)
Fphi_0131	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
Fphi_0152	PWY-4202	arsenate detoxification I (glutaredoxin)
Fphi_0152	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
Fphi_0152	PWY-6608	guanosine nucleotides degradation III
Fphi_0152	PWY-6609	adenine and adenosine salvage III
Fphi_0152	PWY-6611	adenine and adenosine salvage V
Fphi_0152	PWY-6620	guanine and guanosine salvage
Fphi_0152	PWY-6627	salinosporamide A biosynthesis
Fphi_0152	PWY-6644	fluoroacetate and fluorothreonine biosynthesis
Fphi_0152	PWY-7179	purine deoxyribonucleosides degradation I
Fphi_0152	PWY-7179-1	purine deoxyribonucleosides degradation
Fphi_0158	PWY-3801	sucrose degradation II (sucrose synthase)
Fphi_0158	PWY-5054	sorbitol biosynthesis I
Fphi_0158	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
Fphi_0158	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
Fphi_0158	PWY-5659	GDP-mannose biosynthesis
Fphi_0158	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Fphi_0158	PWY-621	sucrose degradation III (sucrose invertase)
Fphi_0158	PWY-622	starch biosynthesis
Fphi_0158	PWY-6531	mannitol cycle
Fphi_0158	PWY-6981	chitin biosynthesis
Fphi_0158	PWY-7238	sucrose biosynthesis II
Fphi_0158	PWY-7347	sucrose biosynthesis III
Fphi_0158	PWY-7385	1,3-propanediol biosynthesis (engineered)
Fphi_0159	PWY-6898	thiamin salvage III
Fphi_0159	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
Fphi_0159	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
Fphi_0160	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
Fphi_0160	PWY-6596	adenosine nucleotides degradation I
Fphi_0160	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
Fphi_0161	PWY-5988	wound-induced proteolysis I
Fphi_0161	PWY-6018	seed germination protein turnover
Fphi_0169	PWY-4202	arsenate detoxification I (glutaredoxin)
Fphi_0169	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
Fphi_0169	PWY-6608	guanosine nucleotides degradation III
Fphi_0169	PWY-6609	adenine and adenosine salvage III
Fphi_0169	PWY-6611	adenine and adenosine salvage V
Fphi_0169	PWY-6620	guanine and guanosine salvage
Fphi_0169	PWY-6627	salinosporamide A biosynthesis
Fphi_0169	PWY-6644	fluoroacetate and fluorothreonine biosynthesis
Fphi_0169	PWY-7179	purine deoxyribonucleosides degradation I
Fphi_0169	PWY-7179-1	purine deoxyribonucleosides degradation
Fphi_0170	PWY-6556	pyrimidine ribonucleosides salvage II
Fphi_0170	PWY-7181	pyrimidine deoxyribonucleosides degradation
Fphi_0170	PWY-7193	pyrimidine ribonucleosides salvage I
Fphi_0170	PWY-7199	pyrimidine deoxyribonucleosides salvage
Fphi_0171	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Fphi_0171	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Fphi_0172	PWY-1042	glycolysis IV (plant cytosol)
Fphi_0172	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
Fphi_0172	PWY-5484	glycolysis II (from fructose 6-phosphate)
Fphi_0172	PWY-5723	Rubisco shunt
Fphi_0172	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Fphi_0172	PWY-6886	1-butanol autotrophic biosynthesis
Fphi_0172	PWY-6901	superpathway of glucose and xylose degradation
Fphi_0172	PWY-7003	glycerol degradation to butanol
Fphi_0172	PWY-7124	ethylene biosynthesis V (engineered)
Fphi_0172	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
Fphi_0173	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
Fphi_0208	PWY-6902	chitin degradation II
Fphi_0213	PWY-2201	folate transformations I
Fphi_0213	PWY-5497	purine nucleobases degradation II (anaerobic)
Fphi_0214	PWY-7183	pyrimidine nucleobases salvage I
Fphi_0215	PWY-6902	chitin degradation II
Fphi_0217	PWY-7378	aminopropanol phosphate biosynthesis II
Fphi_0219	PWY-7560	methylerythritol phosphate pathway II
Fphi_0221	PWY-1042	glycolysis IV (plant cytosol)
Fphi_0221	PWY-1622	formaldehyde assimilation I (serine pathway)
Fphi_0221	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
Fphi_0221	PWY-5484	glycolysis II (from fructose 6-phosphate)
Fphi_0221	PWY-5723	Rubisco shunt
Fphi_0221	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Fphi_0221	PWY-6886	1-butanol autotrophic biosynthesis
Fphi_0221	PWY-6901	superpathway of glucose and xylose degradation
Fphi_0221	PWY-7003	glycerol degradation to butanol
Fphi_0221	PWY-7124	ethylene biosynthesis V (engineered)
Fphi_0221	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
Fphi_0229	PWY-7193	pyrimidine ribonucleosides salvage I
Fphi_0230	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
Fphi_0230	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
Fphi_0246	PWY-5392	reductive TCA cycle II
Fphi_0246	PWY-5537	pyruvate fermentation to acetate V
Fphi_0246	PWY-5538	pyruvate fermentation to acetate VI
Fphi_0246	PWY-5690	TCA cycle II (plants and fungi)
Fphi_0246	PWY-5913	TCA cycle VI (obligate autotrophs)
Fphi_0246	PWY-6728	methylaspartate cycle
Fphi_0246	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Fphi_0246	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Fphi_0247	PWY-5392	reductive TCA cycle II
Fphi_0247	PWY-5537	pyruvate fermentation to acetate V
Fphi_0247	PWY-5538	pyruvate fermentation to acetate VI
Fphi_0247	PWY-5690	TCA cycle II (plants and fungi)
Fphi_0247	PWY-5913	TCA cycle VI (obligate autotrophs)
Fphi_0247	PWY-6728	methylaspartate cycle
Fphi_0247	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Fphi_0247	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Fphi_0252	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
Fphi_0269	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
Fphi_0269	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
Fphi_0275	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Fphi_0275	PWY-6416	quinate degradation II
Fphi_0275	PWY-6707	gallate biosynthesis
Fphi_0284	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Fphi_0284	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
Fphi_0295	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Fphi_0295	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Fphi_0296	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
Fphi_0296	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
Fphi_0296	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
Fphi_0297	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
Fphi_0297	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
Fphi_0298	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Fphi_0307	PWY-5686	UMP biosynthesis
Fphi_0309	PWY-6807	xyloglucan degradation II (exoglucanase)
Fphi_0312	PWY-702	L-methionine biosynthesis II
Fphi_0313	PWY-2941	L-lysine biosynthesis II
Fphi_0313	PWY-2942	L-lysine biosynthesis III
Fphi_0313	PWY-5097	L-lysine biosynthesis VI
Fphi_0313	PWY-6559	spermidine biosynthesis II
Fphi_0313	PWY-6562	norspermidine biosynthesis
Fphi_0313	PWY-7153	grixazone biosynthesis
Fphi_0314	PWY-2941	L-lysine biosynthesis II
Fphi_0314	PWY-2942	L-lysine biosynthesis III
Fphi_0314	PWY-5097	L-lysine biosynthesis VI
Fphi_0314	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Fphi_0314	PWY-6559	spermidine biosynthesis II
Fphi_0314	PWY-6562	norspermidine biosynthesis
Fphi_0314	PWY-7153	grixazone biosynthesis
Fphi_0314	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Fphi_0316	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Fphi_0316	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Fphi_0322	PWY-5941	glycogen degradation II (eukaryotic)
Fphi_0322	PWY-6724	starch degradation II
Fphi_0322	PWY-6737	starch degradation V
Fphi_0322	PWY-7238	sucrose biosynthesis II
Fphi_0323	PWY-5941	glycogen degradation II (eukaryotic)
Fphi_0323	PWY-622	starch biosynthesis
Fphi_0323	PWY-6731	starch degradation III
Fphi_0323	PWY-6737	starch degradation V
Fphi_0323	PWY-7238	sucrose biosynthesis II
Fphi_0325	PWY-622	starch biosynthesis
Fphi_0326	PWY-622	starch biosynthesis
Fphi_0327	PWY-6749	CMP-legionaminate biosynthesis I
Fphi_0328	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
Fphi_0328	PWY-622	starch biosynthesis
Fphi_0329	PWY-842	starch degradation I
Fphi_0330	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Fphi_0333	PWY-5344	L-homocysteine biosynthesis
Fphi_0333	PWY-7174	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation II
Fphi_0356	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
Fphi_0356	PWY-6153	autoinducer AI-2 biosynthesis I
Fphi_0356	PWY-6154	autoinducer AI-2 biosynthesis II (<i>Vibrio</i>)
Fphi_0365	PWY-6749	CMP-legionaminate biosynthesis I
Fphi_0366	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
Fphi_0370	PWY-5669	phosphatidylethanolamine biosynthesis I
Fphi_0381	PWY-2723	trehalose degradation V
Fphi_0381	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
Fphi_0381	PWY-5661	GDP-glucose biosynthesis
Fphi_0381	PWY-7238	sucrose biosynthesis II
Fphi_0381	PWY-7385	1,3-propanediol biosynthesis (engineered)
Fphi_0382	PWY-5839	menaquinol-7 biosynthesis
Fphi_0382	PWY-5844	menaquinol-9 biosynthesis
Fphi_0382	PWY-5849	menaquinol-6 biosynthesis
Fphi_0382	PWY-5890	menaquinol-10 biosynthesis
Fphi_0382	PWY-5891	menaquinol-11 biosynthesis
Fphi_0382	PWY-5892	menaquinol-12 biosynthesis
Fphi_0382	PWY-5895	menaquinol-13 biosynthesis
Fphi_0389	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Fphi_0389	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Fphi_0390	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Fphi_0390	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Fphi_0395	PWY-5523	5,6-dimethylbenzimidazole biosynthesis
Fphi_0395	PWY-6167	flavin biosynthesis II (archaea)
Fphi_0395	PWY-6168	flavin biosynthesis III (fungi)
Fphi_0416	PWY-6123	inosine-5'-phosphate biosynthesis I
Fphi_0416	PWY-7234	inosine-5'-phosphate biosynthesis III
Fphi_0417	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Fphi_0417	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
Fphi_0418	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Fphi_0418	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
Fphi_0418	PWY-6123	inosine-5'-phosphate biosynthesis I
Fphi_0418	PWY-6124	inosine-5'-phosphate biosynthesis II
Fphi_0418	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
Fphi_0418	PWY-7234	inosine-5'-phosphate biosynthesis III
Fphi_0419	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Fphi_0419	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
Fphi_0419	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
Fphi_0420	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
Fphi_0420	PWY-2201	folate transformations I
Fphi_0420	PWY-3841	folate transformations II
Fphi_0420	PWY-5030	L-histidine degradation III
Fphi_0420	PWY-5497	purine nucleobases degradation II (anaerobic)
Fphi_0420	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
Fphi_0427	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
Fphi_0427	PWY-3162	L-tryptophan degradation V (side chain pathway)
Fphi_0427	PWY-5057	L-valine degradation II
Fphi_0427	PWY-5076	L-leucine degradation III
Fphi_0427	PWY-5078	L-isoleucine degradation II
Fphi_0427	PWY-5079	L-phenylalanine degradation III
Fphi_0427	PWY-5082	L-methionine degradation III
Fphi_0427	PWY-5480	pyruvate fermentation to ethanol I
Fphi_0427	PWY-5486	pyruvate fermentation to ethanol II
Fphi_0427	PWY-5751	phenylethanol biosynthesis
Fphi_0427	PWY-6028	acetoin degradation
Fphi_0427	PWY-6313	serotonin degradation
Fphi_0427	PWY-6333	acetaldehyde biosynthesis I
Fphi_0427	PWY-6342	noradrenaline and adrenaline degradation
Fphi_0427	PWY-6587	pyruvate fermentation to ethanol III
Fphi_0427	PWY-6802	salidroside biosynthesis
Fphi_0427	PWY-6871	3-methylbutanol biosynthesis
Fphi_0427	PWY-7013	L-1,2-propanediol degradation
Fphi_0427	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Fphi_0427	PWY-7118	chitin degradation to ethanol
Fphi_0427	PWY-7396	butanol and isobutanol biosynthesis (engineered)
Fphi_0427	PWY-7557	dehydrodiconiferyl alcohol degradation
Fphi_0428	PWY-5659	GDP-mannose biosynthesis
Fphi_0428	PWY-6073	alginate biosynthesis I (algal)
Fphi_0428	PWY-6082	alginate biosynthesis II (bacterial)
Fphi_0428	PWY-882	L-ascorbate biosynthesis I (L-galactose pathway)
Fphi_0431	PWY-6854	ethylene biosynthesis III (microbes)
Fphi_0436	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Fphi_0440	PWY-5667	CDP-diacylglycerol biosynthesis I
Fphi_0440	PWY-5981	CDP-diacylglycerol biosynthesis III
Fphi_0452	PWY-5755	4-hydroxybenzoate biosynthesis II (microbes)
Fphi_0452	PWY-5870	ubiquinol-8 biosynthesis (eukaryotic)
Fphi_0452	PWY-6148	tetrahydromethanopterin biosynthesis
Fphi_0474	PWY-3461	L-tyrosine biosynthesis II
Fphi_0474	PWY-3462	L-phenylalanine biosynthesis II
Fphi_0474	PWY-6120	L-tyrosine biosynthesis III
Fphi_0474	PWY-6627	salinosporamide A biosynthesis
Fphi_0475	PWY-7560	methylerythritol phosphate pathway II
Fphi_0481	PWY-5913	TCA cycle VI (obligate autotrophs)
Fphi_0481	PWY-6318	L-phenylalanine degradation IV (mammalian, via side chain)
Fphi_0481	PWY-6638	sulfolactate degradation III
Fphi_0481	PWY-6642	(<i>R</i>)-cysteate degradation
Fphi_0481	PWY-6643	coenzyme M biosynthesis II
Fphi_0481	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
Fphi_0481	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
Fphi_0481	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
Fphi_0489	PWY-5392	reductive TCA cycle II
Fphi_0489	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
Fphi_0489	PWY-5690	TCA cycle II (plants and fungi)
Fphi_0489	PWY-5913	TCA cycle VI (obligate autotrophs)
Fphi_0489	PWY-6728	methylaspartate cycle
Fphi_0489	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Fphi_0489	PWY-7254	TCA cycle VII (acetate-producers)
Fphi_0489	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Fphi_0504	PWY-5855	ubiquinol-7 biosynthesis (prokaryotic)
Fphi_0504	PWY-5856	ubiquinol-9 biosynthesis (prokaryotic)
Fphi_0504	PWY-5857	ubiquinol-10 biosynthesis (prokaryotic)
Fphi_0504	PWY-5870	ubiquinol-8 biosynthesis (eukaryotic)
Fphi_0504	PWY-5871	ubiquinol-9 biosynthesis (eukaryotic)
Fphi_0504	PWY-5872	ubiquinol-10 biosynthesis (eukaryotic)
Fphi_0504	PWY-5873	ubiquinol-7 biosynthesis (eukaryotic)
Fphi_0504	PWY-6708	ubiquinol-8 biosynthesis (prokaryotic)
Fphi_0504	PWY-7230	ubiquinol-6 biosynthesis from 4-aminobenzoate (eukaryotic)
Fphi_0504	PWY-7233	ubiquinol-6 bypass biosynthesis (eukaryotic)
Fphi_0510	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
Fphi_0512	PWY-6902	chitin degradation II
Fphi_0527	PWY-5484	glycolysis II (from fructose 6-phosphate)
Fphi_0543	PWY-6840	homoglutathione biosynthesis
Fphi_0543	PWY-7255	ergothioneine biosynthesis I (bacteria)
Fphi_0547	PWY-2161	folate polyglutamylation
Fphi_0548	PWY-4381	fatty acid biosynthesis initiation I
Fphi_0548	PWY-5743	3-hydroxypropanoate cycle
Fphi_0548	PWY-5744	glyoxylate assimilation
Fphi_0548	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Fphi_0548	PWY-6679	jadomycin biosynthesis
Fphi_0548	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Fphi_0549	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
Fphi_0549	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
Fphi_0549	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Fphi_0549	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
Fphi_0549	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
Fphi_0549	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
Fphi_0549	PWY-7205	CMP phosphorylation
Fphi_0549	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
Fphi_0549	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Fphi_0549	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
Fphi_0549	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Fphi_0549	PWY-7224	purine deoxyribonucleosides salvage
Fphi_0549	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
Fphi_0549	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
Fphi_0550	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
Fphi_0550	PWY-7177	UTP and CTP dephosphorylation II
Fphi_0550	PWY-7185	UTP and CTP dephosphorylation I
Fphi_0552	PWY-4983	L-citrulline-nitric oxide cycle
Fphi_0552	PWY-4984	urea cycle
Fphi_0552	PWY-5	canavanine biosynthesis
Fphi_0552	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Fphi_0552	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Fphi_0553	PWY-4983	L-citrulline-nitric oxide cycle
Fphi_0553	PWY-4984	urea cycle
Fphi_0553	PWY-5	canavanine biosynthesis
Fphi_0553	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Fphi_0553	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Fphi_0554	PWY-3341	L-proline biosynthesis III
Fphi_0554	PWY-4981	L-proline biosynthesis II (from arginine)
Fphi_0554	PWY-6344	L-ornithine degradation II (Stickland reaction)
Fphi_0554	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
Fphi_0556	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Fphi_0556	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Fphi_0557	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Fphi_0558	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Fphi_0558	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Fphi_0559	PWY-4981	L-proline biosynthesis II (from arginine)
Fphi_0559	PWY-4984	urea cycle
Fphi_0559	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Fphi_0591	PWY-5269	cardiolipin biosynthesis II
Fphi_0591	PWY-5668	cardiolipin biosynthesis I
Fphi_0592	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
Fphi_0592	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Fphi_0592	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
Fphi_0592	PWY-7206	pyrimidine deoxyribonucleotides dephosphorylation
Fphi_0599	PWY-6936	seleno-amino acid biosynthesis
Fphi_0600	PWY-3841	folate transformations II
Fphi_0600	PWY-6614	tetrahydrofolate biosynthesis
Fphi_0601	PWY-6936	seleno-amino acid biosynthesis
Fphi_0601	PWY-7274	D-cycloserine biosynthesis
Fphi_0603	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Fphi_0604	PWY-5392	reductive TCA cycle II
Fphi_0604	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
Fphi_0604	PWY-5690	TCA cycle II (plants and fungi)
Fphi_0604	PWY-5913	TCA cycle VI (obligate autotrophs)
Fphi_0604	PWY-6728	methylaspartate cycle
Fphi_0604	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Fphi_0604	PWY-7254	TCA cycle VII (acetate-producers)
Fphi_0604	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Fphi_0613	PWY-1622	formaldehyde assimilation I (serine pathway)
Fphi_0613	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
Fphi_0613	PWY-5913	TCA cycle VI (obligate autotrophs)
Fphi_0613	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Fphi_0613	PWY-6146	<i>Methanobacterium thermoautotrophicum</i> biosynthetic metabolism
Fphi_0613	PWY-6549	L-glutamine biosynthesis III
Fphi_0613	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
Fphi_0613	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
Fphi_0613	PWY-7124	ethylene biosynthesis V (engineered)
Fphi_0630	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
Fphi_0630	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
Fphi_0639	PWY-6785	hydrogen production VIII
Fphi_0646	PWY-6599	guanine and guanosine salvage II
Fphi_0646	PWY-6609	adenine and adenosine salvage III
Fphi_0646	PWY-6610	adenine and adenosine salvage IV
Fphi_0646	PWY-6620	guanine and guanosine salvage
Fphi_0647	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Fphi_0648	PWY-6123	inosine-5'-phosphate biosynthesis I
Fphi_0648	PWY-6124	inosine-5'-phosphate biosynthesis II
Fphi_0648	PWY-7234	inosine-5'-phosphate biosynthesis III
Fphi_0652	PWY-381	nitrate reduction II (assimilatory)
Fphi_0652	PWY-5675	nitrate reduction V (assimilatory)
Fphi_0652	PWY-6549	L-glutamine biosynthesis III
Fphi_0652	PWY-6963	ammonia assimilation cycle I
Fphi_0652	PWY-6964	ammonia assimilation cycle II
Fphi_0663	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Fphi_0663	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Fphi_0678	PWY-7560	methylerythritol phosphate pathway II
Fphi_0691	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Fphi_0691	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
Fphi_0700	PWY-1281	sulfoacetaldehyde degradation I
Fphi_0700	PWY-5482	pyruvate fermentation to acetate II
Fphi_0700	PWY-5485	pyruvate fermentation to acetate IV
Fphi_0700	PWY-5497	purine nucleobases degradation II (anaerobic)
Fphi_0700	PWY-6637	sulfolactate degradation II
Fphi_0701	PWY-5482	pyruvate fermentation to acetate II
Fphi_0701	PWY-5485	pyruvate fermentation to acetate IV
Fphi_0701	PWY-5497	purine nucleobases degradation II (anaerobic)
Fphi_0714	PWY-6167	flavin biosynthesis II (archaea)
Fphi_0714	PWY-6168	flavin biosynthesis III (fungi)
Fphi_0714	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Fphi_0715	PWY-6167	flavin biosynthesis II (archaea)
Fphi_0715	PWY-6168	flavin biosynthesis III (fungi)
Fphi_0715	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
Fphi_0716	PWY-6167	flavin biosynthesis II (archaea)
Fphi_0716	PWY-6168	flavin biosynthesis III (fungi)
Fphi_0729	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
Fphi_0741	PWY-7039	phosphatidate metabolism, as a signaling molecule
Fphi_0751	PWY-5269	cardiolipin biosynthesis II
Fphi_0751	PWY-5668	cardiolipin biosynthesis I
Fphi_0754	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Fphi_0754	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Fphi_0755	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Fphi_0767	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
Fphi_0767	PWY-6549	L-glutamine biosynthesis III
Fphi_0767	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
Fphi_0767	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
Fphi_0768	PWY-5057	L-valine degradation II
Fphi_0768	PWY-5076	L-leucine degradation III
Fphi_0768	PWY-5078	L-isoleucine degradation II
Fphi_0768	PWY-5101	L-isoleucine biosynthesis II
Fphi_0768	PWY-5103	L-isoleucine biosynthesis III
Fphi_0768	PWY-5104	L-isoleucine biosynthesis IV
Fphi_0768	PWY-5108	L-isoleucine biosynthesis V
Fphi_0769	PWY-6871	3-methylbutanol biosynthesis
Fphi_0772	PWY-7396	butanol and isobutanol biosynthesis (engineered)
Fphi_0779	PWY-7303	3-dimethylallyl-4-hydroxybenzoate biosynthesis
Fphi_0781	PWY-5686	UMP biosynthesis
Fphi_0783	PWY-3461	L-tyrosine biosynthesis II
Fphi_0783	PWY-3462	L-phenylalanine biosynthesis II
Fphi_0783	PWY-6120	L-tyrosine biosynthesis III
Fphi_0783	PWY-6627	salinosporamide A biosynthesis
Fphi_0802	PWY-5686	UMP biosynthesis
Fphi_0805	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Fphi_0805	PWY-5686	UMP biosynthesis
Fphi_0805	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Fphi_0806	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Fphi_0806	PWY-5686	UMP biosynthesis
Fphi_0806	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Fphi_0807	PWY-5686	UMP biosynthesis
Fphi_0838	PWY-5958	acridone alkaloid biosynthesis
Fphi_0838	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
Fphi_0838	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
Fphi_0839	PWY-5958	acridone alkaloid biosynthesis
Fphi_0839	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
Fphi_0839	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
Fphi_0864	PWY-6902	chitin degradation II
Fphi_0877	PWY-2941	L-lysine biosynthesis II
Fphi_0877	PWY-2942	L-lysine biosynthesis III
Fphi_0877	PWY-5097	L-lysine biosynthesis VI
Fphi_0877	PWY-6559	spermidine biosynthesis II
Fphi_0877	PWY-6562	norspermidine biosynthesis
Fphi_0877	PWY-7153	grixazone biosynthesis
Fphi_0878	PWY-2941	L-lysine biosynthesis II
Fphi_0878	PWY-2942	L-lysine biosynthesis III
Fphi_0878	PWY-5097	L-lysine biosynthesis VI
Fphi_0879	PWY-2941	L-lysine biosynthesis II
Fphi_0879	PWY-2942	L-lysine biosynthesis III
Fphi_0879	PWY-5097	L-lysine biosynthesis VI
Fphi_0902	PWY-6012	acyl carrier protein metabolism I
Fphi_0902	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
Fphi_0903	PWY-4321	L-glutamate degradation IV
Fphi_0904	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Fphi_0904	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
Fphi_0904	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
Fphi_0904	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
Fphi_0905	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Fphi_0905	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
Fphi_0905	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
Fphi_0911	PWY-6123	inosine-5'-phosphate biosynthesis I
Fphi_0911	PWY-6124	inosine-5'-phosphate biosynthesis II
Fphi_0911	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Fphi_0911	PWY-7234	inosine-5'-phosphate biosynthesis III
Fphi_0915	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
Fphi_0926	PWY-6409	pyoverdine I biosynthesis
Fphi_0926	PWY-6562	norspermidine biosynthesis
Fphi_0926	PWY-761	rhizobactin 1021 biosynthesis
Fphi_0927	PWY-2941	L-lysine biosynthesis II
Fphi_0927	PWY-2942	L-lysine biosynthesis III
Fphi_0927	PWY-5097	L-lysine biosynthesis VI
Fphi_0927	PWY-6559	spermidine biosynthesis II
Fphi_0927	PWY-6562	norspermidine biosynthesis
Fphi_0927	PWY-7153	grixazone biosynthesis
Fphi_0945	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
Fphi_0945	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
Fphi_0960	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Fphi_0962	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Fphi_0966	PWY-6854	ethylene biosynthesis III (microbes)
Fphi_0971	PWY-3781	aerobic respiration I (cytochrome c)
Fphi_0971	PWY-4302	aerobic respiration III (alternative oxidase pathway)
Fphi_0971	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
Fphi_0971	PWY-5690	TCA cycle II (plants and fungi)
Fphi_0971	PWY-6728	methylaspartate cycle
Fphi_0971	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Fphi_0971	PWY-7254	TCA cycle VII (acetate-producers)
Fphi_0971	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Fphi_0972	PWY-3781	aerobic respiration I (cytochrome c)
Fphi_0972	PWY-4302	aerobic respiration III (alternative oxidase pathway)
Fphi_0972	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
Fphi_0972	PWY-5690	TCA cycle II (plants and fungi)
Fphi_0972	PWY-6728	methylaspartate cycle
Fphi_0972	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Fphi_0972	PWY-7254	TCA cycle VII (acetate-producers)
Fphi_0972	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Fphi_0973	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
Fphi_0974	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
Fphi_0975	PWY-6605	adenine and adenosine salvage II
Fphi_0975	PWY-6610	adenine and adenosine salvage IV
Fphi_0976	PWY-6749	CMP-legionaminate biosynthesis I
Fphi_0977	PWY-1042	glycolysis IV (plant cytosol)
Fphi_0977	PWY-5484	glycolysis II (from fructose 6-phosphate)
Fphi_0977	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Fphi_0977	PWY-7003	glycerol degradation to butanol
Fphi_1014	PWY-3961	phosphopantothenate biosynthesis II
Fphi_1015	PWY-7180	2'-deoxy-&alpha;-D-ribose 1-phosphate degradation
Fphi_1016	PWY-7180	2'-deoxy-&alpha;-D-ribose 1-phosphate degradation
Fphi_1019	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
Fphi_1019	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Fphi_1019	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
Fphi_1019	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
Fphi_1019	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
Fphi_1019	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
Fphi_1033	PWY-4261	glycerol degradation I
Fphi_1034	PWY-4261	glycerol degradation I
Fphi_1034	PWY-6118	glycerol-3-phosphate shuttle
Fphi_1034	PWY-6952	glycerophosphodiester degradation
Fphi_1051	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
Fphi_1051	PWY-5912	2'-deoxymugineic acid phytosiderophore biosynthesis
Fphi_1054	PWY-6829	tRNA methylation (yeast)
Fphi_1054	PWY-7285	methylwyosine biosynthesis
Fphi_1054	PWY-7286	7-(3-amino-3-carboxypropyl)-wyosine biosynthesis
Fphi_1071	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Fphi_1083	PWY-5971	palmitate biosynthesis II (bacteria and plants)
Fphi_1083	PWY-5973	<i>cis</i>-vaccenate biosynthesis
Fphi_1083	PWY-5989	stearate biosynthesis II (bacteria and plants)
Fphi_1083	PWY-5994	palmitate biosynthesis I (animals and fungi)
Fphi_1083	PWY-6113	superpathway of mycolate biosynthesis
Fphi_1083	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
Fphi_1083	PWY-6519	8-amino-7-oxononanoate biosynthesis I
Fphi_1083	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Fphi_1083	PWYG-321	mycolate biosynthesis
Fphi_1092	PWY-5367	petroselinate biosynthesis
Fphi_1092	PWY-5971	palmitate biosynthesis II (bacteria and plants)
Fphi_1092	PWY-5973	<i>cis</i>-vaccenate biosynthesis
Fphi_1092	PWY-5989	stearate biosynthesis II (bacteria and plants)
Fphi_1092	PWY-5994	palmitate biosynthesis I (animals and fungi)
Fphi_1092	PWY-6113	superpathway of mycolate biosynthesis
Fphi_1092	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
Fphi_1092	PWY-6519	8-amino-7-oxononanoate biosynthesis I
Fphi_1092	PWY-6951	Fphi_1092|Fphi_1092|YP_001677816.1|GeneID:5908407
Fphi_1092	PWY-7053	docosahexaenoate biosynthesis I (lower eukaryotes)
Fphi_1092	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Fphi_1092	PWYG-321	mycolate biosynthesis
Fphi_1109	PWY-2941	L-lysine biosynthesis II
Fphi_1109	PWY-2942	L-lysine biosynthesis III
Fphi_1109	PWY-5097	L-lysine biosynthesis VI
Fphi_1134	PWY-4381	fatty acid biosynthesis initiation I
Fphi_1134	PWY-5743	3-hydroxypropanoate cycle
Fphi_1134	PWY-5744	glyoxylate assimilation
Fphi_1134	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Fphi_1134	PWY-6679	jadomycin biosynthesis
Fphi_1134	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Fphi_1143	PWY-6902	chitin degradation II
Fphi_1170	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
Fphi_1170	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
Fphi_1177	PWY-6784	cellulose and hemicellulose degradation (cellulolosome)
Fphi_1185	PWY-6891	thiazole biosynthesis II (Bacillus)
Fphi_1185	PWY-6892	thiazole biosynthesis I (E. coli)
Fphi_1185	PWY-7560	methylerythritol phosphate pathway II
Fphi_1187	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
Fphi_1187	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
Fphi_1195	PWY-7560	methylerythritol phosphate pathway II
Fphi_1199	PWY-5971	palmitate biosynthesis II (bacteria and plants)
Fphi_1199	PWY-5973	<i>cis</i>-vaccenate biosynthesis
Fphi_1199	PWY-5989	stearate biosynthesis II (bacteria and plants)
Fphi_1199	PWY-5994	palmitate biosynthesis I (animals and fungi)
Fphi_1199	PWY-6113	superpathway of mycolate biosynthesis
Fphi_1199	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
Fphi_1199	PWY-6519	8-amino-7-oxononanoate biosynthesis I
Fphi_1199	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Fphi_1199	PWYG-321	mycolate biosynthesis
Fphi_1204	PWY-6826	phosphatidylcholine biosynthesis VI
Fphi_1207	PWY-7206	pyrimidine deoxyribonucleotides dephosphorylation
Fphi_1208	PWY-3341	L-proline biosynthesis III
Fphi_1208	PWY-4981	L-proline biosynthesis II (from arginine)
Fphi_1208	PWY-6344	L-ornithine degradation II (Stickland reaction)
Fphi_1232	PWY-5381	pyridine nucleotide cycling (plants)
Fphi_1237	PWY-1361	benzoyl-CoA degradation I (aerobic)
Fphi_1237	PWY-5109	2-methylbutanoate biosynthesis
Fphi_1237	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
Fphi_1237	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
Fphi_1237	PWY-5177	glutaryl-CoA degradation
Fphi_1237	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Fphi_1237	PWY-6435	4-hydroxybenzoate biosynthesis V
Fphi_1237	PWY-6583	pyruvate fermentation to butanol I
Fphi_1237	PWY-6863	pyruvate fermentation to hexanol
Fphi_1237	PWY-6883	pyruvate fermentation to butanol II
Fphi_1237	PWY-6944	androstenedione degradation
Fphi_1237	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
Fphi_1237	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
Fphi_1237	PWY-7007	methyl ketone biosynthesis
Fphi_1237	PWY-7046	4-coumarate degradation (anaerobic)
Fphi_1237	PWY-7094	fatty acid salvage
Fphi_1237	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
Fphi_1237	PWY-735	jasmonic acid biosynthesis
Fphi_1237	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
Fphi_1241	PWY-5913	TCA cycle VI (obligate autotrophs)
Fphi_1241	PWY-6549	L-glutamine biosynthesis III
Fphi_1241	PWY-6728	methylaspartate cycle
Fphi_1241	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Fphi_1241	PWY-7124	ethylene biosynthesis V (engineered)
Fphi_1241	PWY-7254	TCA cycle VII (acetate-producers)
Fphi_1241	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
Fphi_1246	PWY-5659	GDP-mannose biosynthesis
Fphi_1246	PWY-6073	alginate biosynthesis I (algal)
Fphi_1246	PWY-6082	alginate biosynthesis II (bacterial)
Fphi_1246	PWY-882	L-ascorbate biosynthesis I (L-galactose pathway)
Fphi_1247	PWY-5738	GDP-6-deoxy-D-talose biosynthesis
Fphi_1247	PWY-5739	GDP-D-perosamine biosynthesis
Fphi_1247	PWY-5740	GDP-L-colitose biosynthesis
Fphi_1247	PWY-66	GDP-L-fucose biosynthesis I (from GDP-D-mannose)
Fphi_1249	PWY-66	GDP-L-fucose biosynthesis I (from GDP-D-mannose)
Fphi_1250	PWY-3221	dTDP-L-rhamnose biosynthesis II
Fphi_1250	PWY-6808	dTDP-D-forosamine biosynthesis
Fphi_1250	PWY-6942	dTDP-D-desosamine biosynthesis
Fphi_1250	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
Fphi_1250	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
Fphi_1250	PWY-6974	dTDP-L-olivose biosynthesis
Fphi_1250	PWY-6976	dTDP-L-mycarose biosynthesis
Fphi_1250	PWY-7104	dTDP-L-megosamine biosynthesis
Fphi_1250	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
Fphi_1250	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
Fphi_1250	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
Fphi_1250	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
Fphi_1250	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
Fphi_1250	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
Fphi_1250	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
Fphi_1250	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
Fphi_1253	PWY-3221	dTDP-L-rhamnose biosynthesis II
Fphi_1253	PWY-6808	dTDP-D-forosamine biosynthesis
Fphi_1253	PWY-6942	dTDP-D-desosamine biosynthesis
Fphi_1253	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
Fphi_1253	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
Fphi_1253	PWY-6974	dTDP-L-olivose biosynthesis
Fphi_1253	PWY-6976	dTDP-L-mycarose biosynthesis
Fphi_1253	PWY-7104	dTDP-L-megosamine biosynthesis
Fphi_1253	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
Fphi_1253	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
Fphi_1253	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
Fphi_1253	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
Fphi_1253	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
Fphi_1253	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
Fphi_1253	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
Fphi_1253	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
Fphi_1270	PWY-6749	CMP-legionaminate biosynthesis I
Fphi_1271	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Fphi_1287	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
Fphi_1287	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
Fphi_1287	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
Fphi_1291	PWY-5497	purine nucleobases degradation II (anaerobic)
Fphi_1291	PWY-6606	guanosine nucleotides degradation II
Fphi_1291	PWY-6608	guanosine nucleotides degradation III
Fphi_1291	PWY-7442	drosopterin and aurodrosopterin biosynthesis
Fphi_1313	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Fphi_1313	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
Fphi_1316	PWY-5386	methylglyoxal degradation I
Fphi_1333	PWY-3961	phosphopantothenate biosynthesis II
Fphi_1334	PWY-5155	&beta;-alanine biosynthesis III
Fphi_1336	PWY-6654	phosphopantothenate biosynthesis III
Fphi_1342	PWY-2301	<i>myo</i>-inositol biosynthesis
Fphi_1342	PWY-4702	phytate degradation I
Fphi_1342	PWY-6363	D-<i>myo</i>-inositol (1,4,5)-trisphosphate degradation
Fphi_1349	PWY-5367	petroselinate biosynthesis
Fphi_1349	PWY-5971	palmitate biosynthesis II (bacteria and plants)
Fphi_1349	PWY-5973	<i>cis</i>-vaccenate biosynthesis
Fphi_1349	PWY-5989	stearate biosynthesis II (bacteria and plants)
Fphi_1349	PWY-5994	palmitate biosynthesis I (animals and fungi)
Fphi_1349	PWY-6113	superpathway of mycolate biosynthesis
Fphi_1349	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
Fphi_1349	PWY-6519	8-amino-7-oxononanoate biosynthesis I
Fphi_1349	PWY-6951	Fphi_1349|Fphi_1349|YP_001678075.1|GeneID:5908752
Fphi_1349	PWY-7053	docosahexaenoate biosynthesis I (lower eukaryotes)
Fphi_1349	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Fphi_1349	PWYG-321	mycolate biosynthesis
Fphi_1350	PWY-4381	fatty acid biosynthesis initiation I
Fphi_1350	PWY-6799	fatty acid biosynthesis (plant mitochondria)
Fphi_1350	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Fphi_1351	PWY-4381	fatty acid biosynthesis initiation I
Fphi_1355	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Fphi_1355	PWY-5723	Rubisco shunt
Fphi_1355	PWY-6891	thiazole biosynthesis II (Bacillus)
Fphi_1355	PWY-6892	thiazole biosynthesis I (E. coli)
Fphi_1355	PWY-6901	superpathway of glucose and xylose degradation
Fphi_1355	PWY-7560	methylerythritol phosphate pathway II
Fphi_1356	PWY-1042	glycolysis IV (plant cytosol)
Fphi_1356	PWY-5484	glycolysis II (from fructose 6-phosphate)
Fphi_1356	PWY-6901	superpathway of glucose and xylose degradation
Fphi_1356	PWY-7003	glycerol degradation to butanol
Fphi_1357	PWY-1042	glycolysis IV (plant cytosol)
Fphi_1357	PWY-5484	glycolysis II (from fructose 6-phosphate)
Fphi_1357	PWY-6886	1-butanol autotrophic biosynthesis
Fphi_1357	PWY-6901	superpathway of glucose and xylose degradation
Fphi_1357	PWY-7003	glycerol degradation to butanol
Fphi_1358	PWY-1042	glycolysis IV (plant cytosol)
Fphi_1358	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
Fphi_1358	PWY-5484	glycolysis II (from fructose 6-phosphate)
Fphi_1358	PWY-5723	Rubisco shunt
Fphi_1358	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Fphi_1358	PWY-6886	1-butanol autotrophic biosynthesis
Fphi_1358	PWY-6901	superpathway of glucose and xylose degradation
Fphi_1358	PWY-7003	glycerol degradation to butanol
Fphi_1358	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
Fphi_1358	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
Fphi_1359	PWY-1042	glycolysis IV (plant cytosol)
Fphi_1359	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Fphi_1359	PWY-5484	glycolysis II (from fructose 6-phosphate)
Fphi_1359	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Fphi_1359	PWY-7385	1,3-propanediol biosynthesis (engineered)
Fphi_1369	PWY-6891	thiazole biosynthesis II (Bacillus)
Fphi_1369	PWY-6892	thiazole biosynthesis I (E. coli)
Fphi_1369	PWY-7560	methylerythritol phosphate pathway II
Fphi_1422	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Fphi_1422	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Fphi_1424	PWY-1622	formaldehyde assimilation I (serine pathway)
Fphi_1424	PWY-181	photorespiration
Fphi_1424	PWY-2161	folate polyglutamylation
Fphi_1424	PWY-2201	folate transformations I
Fphi_1424	PWY-3661	glycine betaine degradation I
Fphi_1424	PWY-3661-1	glycine betaine degradation II (mammalian)
Fphi_1424	PWY-3841	folate transformations II
Fphi_1424	PWY-5497	purine nucleobases degradation II (anaerobic)
Fphi_1432	PWY-3841	folate transformations II
Fphi_1432	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Fphi_1432	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
Fphi_1432	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
Fphi_1432	PWY-7199	pyrimidine deoxyribonucleosides salvage
Fphi_1432	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
Fphi_1435	PWY-6823	molybdenum cofactor biosynthesis
Fphi_1435	PWY-6891	thiazole biosynthesis II (Bacillus)
Fphi_1435	PWY-6892	thiazole biosynthesis I (E. coli)
Fphi_1435	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
Fphi_1445	PWY-6348	phosphate acquisition
Fphi_1445	PWY-6357	phosphate utilization in cell wall regeneration
Fphi_1445	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
Fphi_1445	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
Fphi_1447	PWY-6700	queuosine biosynthesis
Fphi_1455	PWY-5386	methylglyoxal degradation I
Fphi_1460	PWY-5971	palmitate biosynthesis II (bacteria and plants)
Fphi_1460	PWY-5973	<i>cis</i>-vaccenate biosynthesis
Fphi_1460	PWY-5989	stearate biosynthesis II (bacteria and plants)
Fphi_1460	PWY-6113	superpathway of mycolate biosynthesis
Fphi_1460	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
Fphi_1460	PWY-6519	8-amino-7-oxononanoate biosynthesis I
Fphi_1460	PWY-7096	triclosan resistance
Fphi_1460	PWYG-321	mycolate biosynthesis
Fphi_1467	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Fphi_1467	PWY-5723	Rubisco shunt
Fphi_1469	PWY-3821	galactose degradation III
Fphi_1469	PWY-6317	galactose degradation I (Leloir pathway)
Fphi_1469	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
Fphi_1469	PWY-6527	stachyose degradation
Fphi_1469	PWY-7328	superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
Fphi_1469	PWY-7344	UDP-D-galactose biosynthesis
Fphi_1483	PWY-7052	cyanophycin metabolism
Fphi_1494	PWY-7052	cyanophycin metabolism
Fphi_1496	PWY-7560	methylerythritol phosphate pathway II
Fphi_1504	PWY-6700	queuosine biosynthesis
Fphi_1517	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Fphi_1521	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
Fphi_1521	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Fphi_1521	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
Fphi_1521	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
Fphi_1537	PWY-2781	<i>cis</i>-zeatin biosynthesis
Fphi_1546	PWY-6871	3-methylbutanol biosynthesis
Fphi_1547	PWY-5101	L-isoleucine biosynthesis II
Fphi_1547	PWY-5103	L-isoleucine biosynthesis III
Fphi_1547	PWY-5104	L-isoleucine biosynthesis IV
Fphi_1547	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Fphi_1548	PWY-5101	L-isoleucine biosynthesis II
Fphi_1548	PWY-5103	L-isoleucine biosynthesis III
Fphi_1548	PWY-5104	L-isoleucine biosynthesis IV
Fphi_1548	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
Fphi_1548	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
Fphi_1548	PWY-6389	(<i>S</i>)-acetoin biosynthesis
Fphi_1548	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Fphi_1550	PWY-5101	L-isoleucine biosynthesis II
Fphi_1550	PWY-5103	L-isoleucine biosynthesis III
Fphi_1550	PWY-5104	L-isoleucine biosynthesis IV
Fphi_1550	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Fphi_1563	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
Fphi_1563	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
Fphi_1563	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
Fphi_1594	PWY-6984	lipoate salvage II
Fphi_1594	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
Fphi_1594	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
Fphi_1599	PWY-5025	indole-3-acetate biosynthesis IV (bacteria)
Fphi_1599	PWY-581	indole-3-acetate biosynthesis II
Fphi_1599	PWY-7308	acrylonitrile degradation I
Fphi_1600	PWY-5025	indole-3-acetate biosynthesis IV (bacteria)
Fphi_1600	PWY-581	indole-3-acetate biosynthesis II
Fphi_1600	PWY-7308	acrylonitrile degradation I
Fphi_1601	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Fphi_1601	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Fphi_1617	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
Fphi_1617	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Fphi_1617	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
Fphi_1617	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
Fphi_1617	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Fphi_1617	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Fphi_1617	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
Fphi_1617	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
Fphi_1619	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
Fphi_1619	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Fphi_1619	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
Fphi_1619	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
Fphi_1619	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Fphi_1619	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Fphi_1619	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
Fphi_1619	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
Fphi_1620	PWY-1622	formaldehyde assimilation I (serine pathway)
Fphi_1620	PWY-5392	reductive TCA cycle II
Fphi_1620	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
Fphi_1620	PWY-5690	TCA cycle II (plants and fungi)
Fphi_1620	PWY-5913	TCA cycle VI (obligate autotrophs)
Fphi_1620	PWY-6728	methylaspartate cycle
Fphi_1620	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Fphi_1620	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
Fphi_1620	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
Fphi_1643	PWY-5506	methanol oxidation to formaldehyde IV
Fphi_1644	PWY-3461	L-tyrosine biosynthesis II
Fphi_1644	PWY-3462	L-phenylalanine biosynthesis II
Fphi_1644	PWY-6120	L-tyrosine biosynthesis III
Fphi_1644	PWY-6627	salinosporamide A biosynthesis
Fphi_1649	PWY-6938	NADH repair
Fphi_1677	PWY-5988	wound-induced proteolysis I
Fphi_1677	PWY-6018	seed germination protein turnover
Fphi_1678	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Fphi_1678	PWY-5723	Rubisco shunt
Fphi_1700	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
Fphi_1700	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
Fphi_1706	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
Fphi_1706	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
Fphi_1708	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
Fphi_1708	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
Fphi_1710	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
Fphi_1710	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
Fphi_1717	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
Fphi_1718	PWY-6891	thiazole biosynthesis II (Bacillus)
Fphi_1718	PWY-6892	thiazole biosynthesis I (E. coli)
Fphi_1718	PWY-7560	methylerythritol phosphate pathway II
Fphi_1739	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
Fphi_1746	PWY-4202	arsenate detoxification I (glutaredoxin)
Fphi_1746	PWY-4621	arsenate detoxification II (glutaredoxin)
Fphi_1771	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
Fphi_1771	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
Fphi_1771	PWY-6164	3-dehydroquinate biosynthesis I
Fphi_1780	PWY-4081	glutathione redox reactions I
Fphi_1784	PWY-5663	tetrahydrobiopterin biosynthesis I
Fphi_1784	PWY-5664	tetrahydrobiopterin biosynthesis II
Fphi_1784	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
Fphi_1784	PWY-6703	preQ<sub>0</sub> biosynthesis
Fphi_1784	PWY-6983	tetrahydrobiopterin biosynthesis III
Fphi_1784	PWY-7442	drosopterin and aurodrosopterin biosynthesis
Fphi_1791	PWY-5958	acridone alkaloid biosynthesis
Fphi_1791	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
Fphi_1791	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
Fphi_1792	PWY-5958	acridone alkaloid biosynthesis
Fphi_1792	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
Fphi_1792	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
Fphi_1794	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
Fphi_1794	PWY-6148	tetrahydromethanopterin biosynthesis
Fphi_1794	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
Fphi_1794	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
Fphi_1795	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
Fphi_1795	PWY-6148	tetrahydromethanopterin biosynthesis
Fphi_1795	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
Fphi_1795	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
Fphi_1799	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
Fphi_1802	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
Fphi_1802	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
Fphi_1803	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
Fphi_1806	PWY-5451	acetone degradation I (to methylglyoxal)
Fphi_1806	PWY-6588	pyruvate fermentation to acetone
Fphi_1806	PWY-6876	isopropanol biosynthesis
Fphi_1806	PWY-7466	acetone degradation III (to propane-1,2-diol)
Fphi_1812	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Fphi_1842	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
Fphi_1842	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
Fphi_1845	PWY-7205	CMP phosphorylation
Fphi_1847	PWY-5316	nicotine biosynthesis
Fphi_1847	PWY-7342	superpathway of nicotine biosynthesis
Fphi_1848	PWY-5316	nicotine biosynthesis
Fphi_1848	PWY-5381	pyridine nucleotide cycling (plants)
Fphi_1848	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
Fphi_1848	PWY-7342	superpathway of nicotine biosynthesis
Fphi_1849	PWY-5316	nicotine biosynthesis
Fphi_1849	PWY-7342	superpathway of nicotine biosynthesis
Fphi_1850	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
Fphi_1856	PWY-6317	galactose degradation I (Leloir pathway)
Fphi_1856	PWY-6527	stachyose degradation
Fphi_1857	PWY-3821	galactose degradation III
Fphi_1857	PWY-6317	galactose degradation I (Leloir pathway)
Fphi_1857	PWY-6527	stachyose degradation
Fphi_1861	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
Fphi_1861	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
Fphi_1878	PWY-6672	<i>cis</i>-genanyl-CoA degradation
Fphi_1878	PWY-7118	chitin degradation to ethanol
Fphi_1879	PWY-3801	sucrose degradation II (sucrose synthase)
Fphi_1879	PWY-6527	stachyose degradation
Fphi_1879	PWY-6981	chitin biosynthesis
Fphi_1879	PWY-7238	sucrose biosynthesis II
Fphi_1879	PWY-7343	UDP-glucose biosynthesis
Fphi_1902	PWY-1042	glycolysis IV (plant cytosol)
Fphi_1902	PWY-1622	formaldehyde assimilation I (serine pathway)
Fphi_1902	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
Fphi_1902	PWY-5484	glycolysis II (from fructose 6-phosphate)
Fphi_1902	PWY-5723	Rubisco shunt
Fphi_1902	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Fphi_1902	PWY-6886	1-butanol autotrophic biosynthesis
Fphi_1902	PWY-6901	superpathway of glucose and xylose degradation
Fphi_1902	PWY-7003	glycerol degradation to butanol
Fphi_1902	PWY-7124	ethylene biosynthesis V (engineered)
Fphi_1902	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
Fphi_1907	PWY-5737	(5<i>R</i>)-carbapenem carboxylate biosynthesis
Fphi_1907	PWY-6853	ethylene biosynthesis II (microbes)
Fphi_1907	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
