GKIL_0012	PWY-6840	homoglutathione biosynthesis
GKIL_0012	PWY-7255	ergothioneine biosynthesis I (bacteria)
GKIL_0013	PWY-101	photosynthesis light reactions
GKIL_0013	PWY-7230	ubiquinol-6 biosynthesis from 4-aminobenzoate (eukaryotic)
GKIL_0014	PWY-5723	Rubisco shunt
GKIL_0015	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
GKIL_0015	PWY-5723	Rubisco shunt
GKIL_0015	PWY-6891	thiazole biosynthesis II (Bacillus)
GKIL_0015	PWY-6892	thiazole biosynthesis I (E. coli)
GKIL_0015	PWY-6901	superpathway of glucose and xylose degradation
GKIL_0015	PWY-7560	methylerythritol phosphate pathway II
GKIL_0019	PWY-3781	aerobic respiration I (cytochrome c)
GKIL_0019	PWY-4302	aerobic respiration III (alternative oxidase pathway)
GKIL_0019	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
GKIL_0019	PWY-5690	TCA cycle II (plants and fungi)
GKIL_0019	PWY-6728	methylaspartate cycle
GKIL_0019	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
GKIL_0019	PWY-7254	TCA cycle VII (acetate-producers)
GKIL_0019	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
GKIL_0023	PWY-622	starch biosynthesis
GKIL_0029	PWY-5198	factor 420 biosynthesis
GKIL_0053	PWY-5169	cyanurate degradation
GKIL_0053	PWY-5703	urea degradation I
GKIL_0053	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
GKIL_0086	PWY-5686	UMP biosynthesis
GKIL_0113	PWY-5971	palmitate biosynthesis II (bacteria and plants)
GKIL_0113	PWY-5973	<i>cis</i>-vaccenate biosynthesis
GKIL_0113	PWY-5989	stearate biosynthesis II (bacteria and plants)
GKIL_0113	PWY-6113	superpathway of mycolate biosynthesis
GKIL_0113	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
GKIL_0113	PWY-6519	8-amino-7-oxononanoate biosynthesis I
GKIL_0113	PWY-7096	triclosan resistance
GKIL_0113	PWYG-321	mycolate biosynthesis
GKIL_0124	PWY-6910	hydroxymethylpyrimidine salvage
GKIL_0124	PWY-7356	thiamin salvage IV (yeast)
GKIL_0124	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
GKIL_0131	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
GKIL_0132	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
GKIL_0132	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
GKIL_0139	PWY-5101	L-isoleucine biosynthesis II
GKIL_0139	PWY-5103	L-isoleucine biosynthesis III
GKIL_0139	PWY-5104	L-isoleucine biosynthesis IV
GKIL_0139	PWY-7111	pyruvate fermentation to isobutanol (engineered)
GKIL_0163	PWY-3801	sucrose degradation II (sucrose synthase)
GKIL_0163	PWY-5054	sorbitol biosynthesis I
GKIL_0163	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
GKIL_0163	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
GKIL_0163	PWY-5659	GDP-mannose biosynthesis
GKIL_0163	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
GKIL_0163	PWY-621	sucrose degradation III (sucrose invertase)
GKIL_0163	PWY-622	starch biosynthesis
GKIL_0163	PWY-6531	mannitol cycle
GKIL_0163	PWY-6981	chitin biosynthesis
GKIL_0163	PWY-7238	sucrose biosynthesis II
GKIL_0163	PWY-7347	sucrose biosynthesis III
GKIL_0163	PWY-7385	1,3-propanediol biosynthesis (engineered)
GKIL_0164	PWY-1281	sulfoacetaldehyde degradation I
GKIL_0164	PWY-5482	pyruvate fermentation to acetate II
GKIL_0164	PWY-5485	pyruvate fermentation to acetate IV
GKIL_0164	PWY-5497	purine nucleobases degradation II (anaerobic)
GKIL_0164	PWY-6637	sulfolactate degradation II
GKIL_0183	PWY-6654	phosphopantothenate biosynthesis III
GKIL_0192	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
GKIL_0204	PWY-4381	fatty acid biosynthesis initiation I
GKIL_0231	PWY-5386	methylglyoxal degradation I
GKIL_0241	PWY-5917	phycocyanobilin biosynthesis
GKIL_0248	PWY-5491	diethylphosphate degradation
GKIL_0259	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
GKIL_0259	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
GKIL_0259	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
GKIL_0260	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
GKIL_0261	PWY-5381	pyridine nucleotide cycling (plants)
GKIL_0261	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
GKIL_0261	PWY-6596	adenosine nucleotides degradation I
GKIL_0261	PWY-6606	guanosine nucleotides degradation II
GKIL_0261	PWY-6607	guanosine nucleotides degradation I
GKIL_0261	PWY-6608	guanosine nucleotides degradation III
GKIL_0261	PWY-7185	UTP and CTP dephosphorylation I
GKIL_0283	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
GKIL_0283	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
GKIL_0287	PWY-5738	GDP-6-deoxy-D-talose biosynthesis
GKIL_0287	PWY-5739	GDP-D-perosamine biosynthesis
GKIL_0287	PWY-5740	GDP-L-colitose biosynthesis
GKIL_0287	PWY-66	GDP-L-fucose biosynthesis I (from GDP-D-mannose)
GKIL_0288	PWY-66	GDP-L-fucose biosynthesis I (from GDP-D-mannose)
GKIL_0289	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
GKIL_0289	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
GKIL_0289	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
GKIL_0294	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
GKIL_0294	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
GKIL_0295	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
GKIL_0295	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
GKIL_0295	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
GKIL_0295	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
GKIL_0295	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
GKIL_0295	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
GKIL_0295	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
GKIL_0295	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
GKIL_0313	PWY-101	photosynthesis light reactions
GKIL_0313	PWY-6785	hydrogen production VIII
GKIL_0314	PWY-6703	preQ<sub>0</sub> biosynthesis
GKIL_0315	PWY-6703	preQ<sub>0</sub> biosynthesis
GKIL_0321	PWY-6683	sulfate reduction III (assimilatory)
GKIL_0323	PWY-4983	L-citrulline-nitric oxide cycle
GKIL_0323	PWY-4984	urea cycle
GKIL_0323	PWY-5	canavanine biosynthesis
GKIL_0323	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
GKIL_0323	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
GKIL_0325	PWY-101	photosynthesis light reactions
GKIL_0325	PWY-6785	hydrogen production VIII
GKIL_0326	PWY-101	photosynthesis light reactions
GKIL_0326	PWY-6785	hydrogen production VIII
GKIL_0329	PWY-6829	tRNA methylation (yeast)
GKIL_0329	PWY-7285	methylwyosine biosynthesis
GKIL_0329	PWY-7286	7-(3-amino-3-carboxypropyl)-wyosine biosynthesis
GKIL_0330	PWY-5316	nicotine biosynthesis
GKIL_0330	PWY-5381	pyridine nucleotide cycling (plants)
GKIL_0330	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
GKIL_0330	PWY-7342	superpathway of nicotine biosynthesis
GKIL_0332	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
GKIL_0332	PWY-6148	tetrahydromethanopterin biosynthesis
GKIL_0332	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
GKIL_0332	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
GKIL_0357	PWY-5941	glycogen degradation II (eukaryotic)
GKIL_0357	PWY-6724	starch degradation II
GKIL_0357	PWY-6737	starch degradation V
GKIL_0357	PWY-7238	sucrose biosynthesis II
GKIL_0362	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
GKIL_0362	PWY-5723	Rubisco shunt
GKIL_0377	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
GKIL_0381	PWY-2161	folate polyglutamylation
GKIL_0428	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
GKIL_0428	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
GKIL_0428	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
GKIL_0428	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
GKIL_0428	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
GKIL_0428	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
GKIL_0428	PWY-7205	CMP phosphorylation
GKIL_0428	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
GKIL_0428	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
GKIL_0428	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
GKIL_0428	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
GKIL_0428	PWY-7224	purine deoxyribonucleosides salvage
GKIL_0428	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
GKIL_0428	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
GKIL_0440	PWY-4041	&gamma;-glutamyl cycle
GKIL_0481	PWY-7335	UDP-<i>N</i>-acetyl-&alpha;-D-mannosaminouronate biosynthesis
GKIL_0491	PWY-3162	L-tryptophan degradation V (side chain pathway)
GKIL_0491	PWY-5057	L-valine degradation II
GKIL_0491	PWY-5076	L-leucine degradation III
GKIL_0491	PWY-5078	L-isoleucine degradation II
GKIL_0491	PWY-5079	L-phenylalanine degradation III
GKIL_0491	PWY-5082	L-methionine degradation III
GKIL_0491	PWY-5480	pyruvate fermentation to ethanol I
GKIL_0491	PWY-5486	pyruvate fermentation to ethanol II
GKIL_0491	PWY-5751	phenylethanol biosynthesis
GKIL_0491	PWY-6028	acetoin degradation
GKIL_0491	PWY-6313	serotonin degradation
GKIL_0491	PWY-6333	acetaldehyde biosynthesis I
GKIL_0491	PWY-6342	noradrenaline and adrenaline degradation
GKIL_0491	PWY-6587	pyruvate fermentation to ethanol III
GKIL_0491	PWY-6802	salidroside biosynthesis
GKIL_0491	PWY-6871	3-methylbutanol biosynthesis
GKIL_0491	PWY-7013	L-1,2-propanediol degradation
GKIL_0491	PWY-7111	pyruvate fermentation to isobutanol (engineered)
GKIL_0491	PWY-7118	chitin degradation to ethanol
GKIL_0491	PWY-7396	butanol and isobutanol biosynthesis (engineered)
GKIL_0491	PWY-7557	dehydrodiconiferyl alcohol degradation
GKIL_0514	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
GKIL_0514	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
GKIL_0515	PWY-5839	menaquinol-7 biosynthesis
GKIL_0515	PWY-5844	menaquinol-9 biosynthesis
GKIL_0515	PWY-5849	menaquinol-6 biosynthesis
GKIL_0515	PWY-5890	menaquinol-10 biosynthesis
GKIL_0515	PWY-5891	menaquinol-11 biosynthesis
GKIL_0515	PWY-5892	menaquinol-12 biosynthesis
GKIL_0515	PWY-5895	menaquinol-13 biosynthesis
GKIL_0554	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
GKIL_0579	PWY-6605	adenine and adenosine salvage II
GKIL_0579	PWY-6610	adenine and adenosine salvage IV
GKIL_0589	PWY-5737	(5<i>R</i>)-carbapenem carboxylate biosynthesis
GKIL_0589	PWY-6853	ethylene biosynthesis II (microbes)
GKIL_0589	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
GKIL_0594	PWY-4381	fatty acid biosynthesis initiation I
GKIL_0594	PWY-5743	3-hydroxypropanoate cycle
GKIL_0594	PWY-5744	glyoxylate assimilation
GKIL_0594	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
GKIL_0594	PWY-6679	jadomycin biosynthesis
GKIL_0594	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
GKIL_0596	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
GKIL_0631	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
GKIL_0648	PWY-4061	glutathione-mediated detoxification I
GKIL_0648	PWY-6842	glutathione-mediated detoxification II
GKIL_0648	PWY-7112	4-hydroxy-2-nonenal detoxification
GKIL_0648	PWY-7533	gliotoxin biosynthesis
GKIL_0654	PWY-7560	methylerythritol phosphate pathway II
GKIL_0662	PWY-5532	adenosine nucleotides degradation IV
GKIL_0662	PWY-5723	Rubisco shunt
GKIL_0667	PWY-5532	adenosine nucleotides degradation IV
GKIL_0667	PWY-5723	Rubisco shunt
GKIL_0669	PWY-5532	adenosine nucleotides degradation IV
GKIL_0669	PWY-5723	Rubisco shunt
GKIL_0686	PWY-5269	cardiolipin biosynthesis II
GKIL_0686	PWY-5668	cardiolipin biosynthesis I
GKIL_0690	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
GKIL_0690	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
GKIL_0704	PWY-6749	CMP-legionaminate biosynthesis I
GKIL_0725	PWY-282	cuticular wax biosynthesis
GKIL_0725	PWY-6622	heptadecane biosynthesis
GKIL_0725	PWY-7032	alkane biosynthesis I
GKIL_0726	PWY-6622	heptadecane biosynthesis
GKIL_0726	PWY-7032	alkane biosynthesis I
GKIL_0727	PWY-101	photosynthesis light reactions
GKIL_0727	PWY-6785	hydrogen production VIII
GKIL_0744	PWY-2201	folate transformations I
GKIL_0744	PWY-3841	folate transformations II
GKIL_0757	PWY-5392	reductive TCA cycle II
GKIL_0757	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
GKIL_0757	PWY-5690	TCA cycle II (plants and fungi)
GKIL_0757	PWY-5913	TCA cycle VI (obligate autotrophs)
GKIL_0757	PWY-6728	methylaspartate cycle
GKIL_0757	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
GKIL_0757	PWY-7254	TCA cycle VII (acetate-producers)
GKIL_0757	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
GKIL_0761	PWY-7183	pyrimidine nucleobases salvage I
GKIL_0795	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
GKIL_0795	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
GKIL_0795	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
GKIL_0795	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
GKIL_0810	PWY-6167	flavin biosynthesis II (archaea)
GKIL_0810	PWY-6168	flavin biosynthesis III (fungi)
GKIL_0810	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
GKIL_0815	PWY-4381	fatty acid biosynthesis initiation I
GKIL_0815	PWY-6799	fatty acid biosynthesis (plant mitochondria)
GKIL_0815	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
GKIL_0819	PWY-7158	L-phenylalanine degradation V
GKIL_0826	PWY-7052	cyanophycin metabolism
GKIL_0925	PWY-6700	queuosine biosynthesis
GKIL_0931	PWY-5659	GDP-mannose biosynthesis
GKIL_0931	PWY-6073	alginate biosynthesis I (algal)
GKIL_0931	PWY-6082	alginate biosynthesis II (bacterial)
GKIL_0931	PWY-882	L-ascorbate biosynthesis I (L-galactose pathway)
GKIL_0944	PWY-6478	GDP-D-<i>glycero</i>-&alpha;-D-<i>manno</i>-heptose biosynthesis
GKIL_0956	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
GKIL_0956	PWY-6507	4-deoxy-L-<i>threo</i>-hex-4-enopyranuronate degradation
GKIL_0956	PWY-7242	D-fructuronate degradation
GKIL_0956	PWY-7310	D-glucosaminate degradation
GKIL_0959	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
GKIL_0959	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
GKIL_0971	PWY-5667	CDP-diacylglycerol biosynthesis I
GKIL_0971	PWY-5981	CDP-diacylglycerol biosynthesis III
GKIL_0972	PWY-5686	UMP biosynthesis
GKIL_0990	PWY-101	photosynthesis light reactions
GKIL_0990	PWY-6785	hydrogen production VIII
GKIL_0991	PWY-2201	folate transformations I
GKIL_0991	PWY-3841	folate transformations II
GKIL_0996	PWY-1042	glycolysis IV (plant cytosol)
GKIL_0996	PWY-5484	glycolysis II (from fructose 6-phosphate)
GKIL_0996	PWY-6901	superpathway of glucose and xylose degradation
GKIL_0996	PWY-7003	glycerol degradation to butanol
GKIL_1011	PWY-6823	molybdenum cofactor biosynthesis
GKIL_1018	PWY-6123	inosine-5'-phosphate biosynthesis I
GKIL_1018	PWY-6124	inosine-5'-phosphate biosynthesis II
GKIL_1018	PWY-7234	inosine-5'-phosphate biosynthesis III
GKIL_1028	PWY-1042	glycolysis IV (plant cytosol)
GKIL_1028	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
GKIL_1028	PWY-5484	glycolysis II (from fructose 6-phosphate)
GKIL_1028	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
GKIL_1028	PWY-7385	1,3-propanediol biosynthesis (engineered)
GKIL_1053	PWY-3961	phosphopantothenate biosynthesis II
GKIL_1054	PWY-6854	ethylene biosynthesis III (microbes)
GKIL_1064	PWY-4041	&gamma;-glutamyl cycle
GKIL_1064	PWY-5826	hypoglycin biosynthesis
GKIL_1066	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
GKIL_1066	PWY-2201	folate transformations I
GKIL_1066	PWY-3841	folate transformations II
GKIL_1066	PWY-5030	L-histidine degradation III
GKIL_1066	PWY-5497	purine nucleobases degradation II (anaerobic)
GKIL_1066	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
GKIL_1073	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
GKIL_1073	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
GKIL_1080	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
GKIL_1080	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
GKIL_1080	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
GKIL_1081	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
GKIL_1081	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
GKIL_1081	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
GKIL_1095	PWY-7180	2'-deoxy-&alpha;-D-ribose 1-phosphate degradation
GKIL_1109	PWY-6167	flavin biosynthesis II (archaea)
GKIL_1109	PWY-6168	flavin biosynthesis III (fungi)
GKIL_1109	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
GKIL_1116	PWY-6123	inosine-5'-phosphate biosynthesis I
GKIL_1116	PWY-7234	inosine-5'-phosphate biosynthesis III
GKIL_1126	PWY-7052	cyanophycin metabolism
GKIL_1146	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
GKIL_1146	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
GKIL_1169	PWY-4361	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation
GKIL_1170	PWY-4361	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation
GKIL_1170	PWY-5389	3-methylthiopropanoate biosynthesis
GKIL_1190	PWY-6700	queuosine biosynthesis
GKIL_1196	PWY-6700	queuosine biosynthesis
GKIL_1200	PWY-6936	seleno-amino acid biosynthesis
GKIL_1216	PWY-7206	pyrimidine deoxyribonucleotides dephosphorylation
GKIL_1218	PWY-1042	glycolysis IV (plant cytosol)
GKIL_1218	PWY-5484	glycolysis II (from fructose 6-phosphate)
GKIL_1218	PWY-6901	superpathway of glucose and xylose degradation
GKIL_1218	PWY-7003	glycerol degradation to butanol
GKIL_1223	PWY-4261	glycerol degradation I
GKIL_1230	PWY-4981	L-proline biosynthesis II (from arginine)
GKIL_1241	PWY-6890	4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis
GKIL_1250	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
GKIL_1250	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
GKIL_1260	PWY-6823	molybdenum cofactor biosynthesis
GKIL_1290	PWY-5941	glycogen degradation II (eukaryotic)
GKIL_1290	PWY-622	starch biosynthesis
GKIL_1290	PWY-6731	starch degradation III
GKIL_1290	PWY-6737	starch degradation V
GKIL_1290	PWY-7238	sucrose biosynthesis II
GKIL_1291	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
GKIL_1291	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
GKIL_1292	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
GKIL_1292	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
GKIL_1312	PWY-5530	sorbitol biosynthesis II
GKIL_1319	PWY-7396	butanol and isobutanol biosynthesis (engineered)
GKIL_1322	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
GKIL_1322	PWY-5723	Rubisco shunt
GKIL_1351	PWY-7039	phosphatidate metabolism, as a signaling molecule
GKIL_1376	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
GKIL_1376	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
GKIL_1385	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
GKIL_1396	PWY-2941	L-lysine biosynthesis II
GKIL_1396	PWY-5097	L-lysine biosynthesis VI
GKIL_1407	PWY-7432	L-phenylalanine biosynthesis III (cytosolic, plants)
GKIL_1415	PWY-1042	glycolysis IV (plant cytosol)
GKIL_1415	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
GKIL_1415	PWY-5484	glycolysis II (from fructose 6-phosphate)
GKIL_1415	PWY-5723	Rubisco shunt
GKIL_1415	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
GKIL_1415	PWY-6886	1-butanol autotrophic biosynthesis
GKIL_1415	PWY-6901	superpathway of glucose and xylose degradation
GKIL_1415	PWY-7003	glycerol degradation to butanol
GKIL_1415	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
GKIL_1415	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
GKIL_1445	PWY-5723	Rubisco shunt
GKIL_1446	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
GKIL_1446	PWY-3162	L-tryptophan degradation V (side chain pathway)
GKIL_1446	PWY-5057	L-valine degradation II
GKIL_1446	PWY-5076	L-leucine degradation III
GKIL_1446	PWY-5078	L-isoleucine degradation II
GKIL_1446	PWY-5079	L-phenylalanine degradation III
GKIL_1446	PWY-5082	L-methionine degradation III
GKIL_1446	PWY-5480	pyruvate fermentation to ethanol I
GKIL_1446	PWY-5486	pyruvate fermentation to ethanol II
GKIL_1446	PWY-5751	phenylethanol biosynthesis
GKIL_1446	PWY-6028	acetoin degradation
GKIL_1446	PWY-6313	serotonin degradation
GKIL_1446	PWY-6333	acetaldehyde biosynthesis I
GKIL_1446	PWY-6342	noradrenaline and adrenaline degradation
GKIL_1446	PWY-6587	pyruvate fermentation to ethanol III
GKIL_1446	PWY-6802	salidroside biosynthesis
GKIL_1446	PWY-6871	3-methylbutanol biosynthesis
GKIL_1446	PWY-7013	L-1,2-propanediol degradation
GKIL_1446	PWY-7111	pyruvate fermentation to isobutanol (engineered)
GKIL_1446	PWY-7118	chitin degradation to ethanol
GKIL_1446	PWY-7396	butanol and isobutanol biosynthesis (engineered)
GKIL_1446	PWY-7557	dehydrodiconiferyl alcohol degradation
GKIL_1450	PWY-4983	L-citrulline-nitric oxide cycle
GKIL_1450	PWY-4984	urea cycle
GKIL_1450	PWY-5	canavanine biosynthesis
GKIL_1450	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
GKIL_1450	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
GKIL_1451	PWY-381	nitrate reduction II (assimilatory)
GKIL_1451	PWY-5675	nitrate reduction V (assimilatory)
GKIL_1451	PWY-6549	L-glutamine biosynthesis III
GKIL_1451	PWY-6963	ammonia assimilation cycle I
GKIL_1451	PWY-6964	ammonia assimilation cycle II
GKIL_1485	PWY-5663	tetrahydrobiopterin biosynthesis I
GKIL_1485	PWY-5664	tetrahydrobiopterin biosynthesis II
GKIL_1485	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
GKIL_1485	PWY-6703	preQ<sub>0</sub> biosynthesis
GKIL_1485	PWY-6983	tetrahydrobiopterin biosynthesis III
GKIL_1485	PWY-7442	drosopterin and aurodrosopterin biosynthesis
GKIL_1505	PWY-5068	chlorophyll cycle
GKIL_1505	PWY-5086	chlorophyll <i>a</i> biosynthesis I
GKIL_1507	PWY-6891	thiazole biosynthesis II (Bacillus)
GKIL_1507	PWY-6892	thiazole biosynthesis I (E. coli)
GKIL_1508	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
GKIL_1508	PWY-7205	CMP phosphorylation
GKIL_1509	PWY-6454	vancomycin resistance I
GKIL_1509	PWY-6455	vancomycin resistance II
GKIL_1547	PWY-4381	fatty acid biosynthesis initiation I
GKIL_1547	PWY-5743	3-hydroxypropanoate cycle
GKIL_1547	PWY-5744	glyoxylate assimilation
GKIL_1547	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
GKIL_1547	PWY-6679	jadomycin biosynthesis
GKIL_1547	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
GKIL_1549	PWY-5101	L-isoleucine biosynthesis II
GKIL_1549	PWY-6871	3-methylbutanol biosynthesis
GKIL_1557	PWY-1622	formaldehyde assimilation I (serine pathway)
GKIL_1557	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
GKIL_1557	PWY-5913	TCA cycle VI (obligate autotrophs)
GKIL_1557	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
GKIL_1557	PWY-6146	<i>Methanobacterium thermoautotrophicum</i> biosynthetic metabolism
GKIL_1557	PWY-6549	L-glutamine biosynthesis III
GKIL_1557	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
GKIL_1557	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
GKIL_1557	PWY-7124	ethylene biosynthesis V (engineered)
GKIL_1562	PWY-5874	heme degradation
GKIL_1562	PWY-5915	phycoerythrobilin biosynthesis I
GKIL_1562	PWY-5917	phycocyanobilin biosynthesis
GKIL_1562	PWY-7170	phytochromobilin biosynthesis
GKIL_1595	PWY-5386	methylglyoxal degradation I
GKIL_1597	PWY-6655	xanthan biosynthesis
GKIL_1597	PWY-6658	acetan biosynthesis
GKIL_1613	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
GKIL_1613	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
GKIL_1632	PWY-5667	CDP-diacylglycerol biosynthesis I
GKIL_1632	PWY-5981	CDP-diacylglycerol biosynthesis III
GKIL_1632	PWY-7411	superpathway of phosphatidate biosynthesis (yeast)
GKIL_1632	PWY-7417	phospholipid remodeling (phosphatidate, yeast)
GKIL_1662	PWY-6654	phosphopantothenate biosynthesis III
GKIL_1670	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
GKIL_1670	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
GKIL_1670	PWY-6269	adenosylcobalamin salvage from cobinamide II
GKIL_1677	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
GKIL_1677	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
GKIL_1678	PWY-6502	oxidized GTP and dGTP detoxification
GKIL_1685	PWY-5941	glycogen degradation II (eukaryotic)
GKIL_1685	PWY-6724	starch degradation II
GKIL_1685	PWY-6737	starch degradation V
GKIL_1685	PWY-7238	sucrose biosynthesis II
GKIL_1753	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
GKIL_1753	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
GKIL_1753	PWY-6268	adenosylcobalamin salvage from cobalamin
GKIL_1753	PWY-6269	adenosylcobalamin salvage from cobinamide II
GKIL_1766	PWY-6825	phosphatidylcholine biosynthesis V
GKIL_1793	PWY-1361	benzoyl-CoA degradation I (aerobic)
GKIL_1793	PWY-5109	2-methylbutanoate biosynthesis
GKIL_1793	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
GKIL_1793	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
GKIL_1793	PWY-5177	glutaryl-CoA degradation
GKIL_1793	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
GKIL_1793	PWY-6435	4-hydroxybenzoate biosynthesis V
GKIL_1793	PWY-6583	pyruvate fermentation to butanol I
GKIL_1793	PWY-6863	pyruvate fermentation to hexanol
GKIL_1793	PWY-6883	pyruvate fermentation to butanol II
GKIL_1793	PWY-6944	androstenedione degradation
GKIL_1793	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
GKIL_1793	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
GKIL_1793	PWY-7007	methyl ketone biosynthesis
GKIL_1793	PWY-7046	4-coumarate degradation (anaerobic)
GKIL_1793	PWY-7094	fatty acid salvage
GKIL_1793	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
GKIL_1793	PWY-735	jasmonic acid biosynthesis
GKIL_1793	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
GKIL_1806	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
GKIL_1827	PWY-6174	mevalonate pathway II (archaea)
GKIL_1827	PWY-7391	isoprene biosynthesis II (engineered)
GKIL_1827	PWY-7524	mevalonate pathway III (archaea)
GKIL_1827	PWY-922	mevalonate pathway I
GKIL_1833	PWY-6012	acyl carrier protein metabolism I
GKIL_1833	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
GKIL_1849	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
GKIL_1858	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
GKIL_1858	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
GKIL_1861	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
GKIL_1861	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
GKIL_1861	PWY-6896	thiamin salvage I
GKIL_1861	PWY-6897	thiamin salvage II
GKIL_1862	PWY-7560	methylerythritol phosphate pathway II
GKIL_1873	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
GKIL_1873	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
GKIL_1878	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
GKIL_1878	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
GKIL_1878	PWY-6269	adenosylcobalamin salvage from cobinamide II
GKIL_1879	PWY-6454	vancomycin resistance I
GKIL_1879	PWY-6455	vancomycin resistance II
GKIL_1892	PWY-6749	CMP-legionaminate biosynthesis I
GKIL_1903	PWY-5833	CDP-4-dehydro-3,6-dideoxy-D-glucose biosynthesis
GKIL_1903	PWY-5940	streptomycin biosynthesis
GKIL_1933	PWY-6823	molybdenum cofactor biosynthesis
GKIL_1933	PWY-6891	thiazole biosynthesis II (Bacillus)
GKIL_1933	PWY-6892	thiazole biosynthesis I (E. coli)
GKIL_1933	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
GKIL_1945	PWY-5738	GDP-6-deoxy-D-talose biosynthesis
GKIL_1945	PWY-5739	GDP-D-perosamine biosynthesis
GKIL_1945	PWY-5740	GDP-L-colitose biosynthesis
GKIL_1945	PWY-66	GDP-L-fucose biosynthesis I (from GDP-D-mannose)
GKIL_1946	PWY-6654	phosphopantothenate biosynthesis III
GKIL_1972	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
GKIL_1972	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
GKIL_1972	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
GKIL_1972	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
GKIL_1981	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
GKIL_1981	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
GKIL_1996	PWY-40	putrescine biosynthesis I
GKIL_1996	PWY-43	putrescine biosynthesis II
GKIL_1996	PWY-6305	putrescine biosynthesis IV
GKIL_1996	PWY-6834	spermidine biosynthesis III
GKIL_2003	PWY-6599	guanine and guanosine salvage II
GKIL_2003	PWY-6609	adenine and adenosine salvage III
GKIL_2003	PWY-6610	adenine and adenosine salvage IV
GKIL_2003	PWY-6620	guanine and guanosine salvage
GKIL_2004	PWY-7560	methylerythritol phosphate pathway II
GKIL_2042	PWY-4202	arsenate detoxification I (glutaredoxin)
GKIL_2042	PWY-4621	arsenate detoxification II (glutaredoxin)
GKIL_2057	PWY-5152	leucodelphinidin biosynthesis
GKIL_2072	PWY-1042	glycolysis IV (plant cytosol)
GKIL_2072	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
GKIL_2072	PWY-5484	glycolysis II (from fructose 6-phosphate)
GKIL_2072	PWY-5723	Rubisco shunt
GKIL_2072	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
GKIL_2072	PWY-6886	1-butanol autotrophic biosynthesis
GKIL_2072	PWY-6901	superpathway of glucose and xylose degradation
GKIL_2072	PWY-7003	glycerol degradation to butanol
GKIL_2072	PWY-7124	ethylene biosynthesis V (engineered)
GKIL_2072	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
GKIL_2098	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
GKIL_2128	PWY-1042	glycolysis IV (plant cytosol)
GKIL_2128	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
GKIL_2128	PWY-5484	glycolysis II (from fructose 6-phosphate)
GKIL_2128	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
GKIL_2128	PWY-7385	1,3-propanediol biosynthesis (engineered)
GKIL_2142	PWY-5523	5,6-dimethylbenzimidazole biosynthesis
GKIL_2142	PWY-6167	flavin biosynthesis II (archaea)
GKIL_2142	PWY-6168	flavin biosynthesis III (fungi)
GKIL_2166	PWY-5484	glycolysis II (from fructose 6-phosphate)
GKIL_2184	PWY-5530	sorbitol biosynthesis II
GKIL_2184	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
GKIL_2186	PWY-3821	galactose degradation III
GKIL_2186	PWY-6317	galactose degradation I (Leloir pathway)
GKIL_2186	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
GKIL_2186	PWY-6527	stachyose degradation
GKIL_2186	PWY-7328	superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
GKIL_2186	PWY-7344	UDP-D-galactose biosynthesis
GKIL_2193	PWY-5958	acridone alkaloid biosynthesis
GKIL_2193	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
GKIL_2193	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
GKIL_2210	PWY-6123	inosine-5'-phosphate biosynthesis I
GKIL_2210	PWY-6124	inosine-5'-phosphate biosynthesis II
GKIL_2210	PWY-7234	inosine-5'-phosphate biosynthesis III
GKIL_2220	PWY-5198	factor 420 biosynthesis
GKIL_2223	PWY-101	photosynthesis light reactions
GKIL_2223	PWY-6785	hydrogen production VIII
GKIL_2228	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
GKIL_2228	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
GKIL_2228	PWY-6269	adenosylcobalamin salvage from cobinamide II
GKIL_2231	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
GKIL_2248	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
GKIL_2248	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
GKIL_2274	PWY-5169	cyanurate degradation
GKIL_2274	PWY-5703	urea degradation I
GKIL_2289	PWY-7560	methylerythritol phosphate pathway II
GKIL_2295	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
GKIL_2300	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
GKIL_2300	PWY-7177	UTP and CTP dephosphorylation II
GKIL_2300	PWY-7185	UTP and CTP dephosphorylation I
GKIL_2312	PWY-702	L-methionine biosynthesis II
GKIL_2331	PWY-5971	palmitate biosynthesis II (bacteria and plants)
GKIL_2331	PWY-5973	<i>cis</i>-vaccenate biosynthesis
GKIL_2331	PWY-5989	stearate biosynthesis II (bacteria and plants)
GKIL_2331	PWY-5994	palmitate biosynthesis I (animals and fungi)
GKIL_2331	PWY-6113	superpathway of mycolate biosynthesis
GKIL_2331	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
GKIL_2331	PWY-6519	8-amino-7-oxononanoate biosynthesis I
GKIL_2331	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
GKIL_2331	PWYG-321	mycolate biosynthesis
GKIL_2342	PWY-7346	UDP-&alpha;-D-glucuronate biosynthesis (from UDP-glucose)
GKIL_2343	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
GKIL_2343	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
GKIL_2343	PWY-6268	adenosylcobalamin salvage from cobalamin
GKIL_2343	PWY-6269	adenosylcobalamin salvage from cobinamide II
GKIL_2369	PWY-6123	inosine-5'-phosphate biosynthesis I
GKIL_2369	PWY-6124	inosine-5'-phosphate biosynthesis II
GKIL_2369	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
GKIL_2369	PWY-7234	inosine-5'-phosphate biosynthesis III
GKIL_2413	PWY-6098	diploterol and cycloartenol biosynthesis
GKIL_2413	PWY-7072	hopanoid biosynthesis (bacteria)
GKIL_2417	PWY-2201	folate transformations I
GKIL_2417	PWY-5497	purine nucleobases degradation II (anaerobic)
GKIL_2419	PWY-7052	cyanophycin metabolism
GKIL_2420	PWY-6854	ethylene biosynthesis III (microbes)
GKIL_2447	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
GKIL_2461	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
GKIL_2461	PWY-5686	UMP biosynthesis
GKIL_2461	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
GKIL_2462	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
GKIL_2462	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
GKIL_2462	PWY-6164	3-dehydroquinate biosynthesis I
GKIL_2463	PWY-5316	nicotine biosynthesis
GKIL_2463	PWY-7342	superpathway of nicotine biosynthesis
GKIL_2465	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
GKIL_2465	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
GKIL_2465	PWY-6897	thiamin salvage II
GKIL_2465	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
GKIL_2465	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
GKIL_2465	PWY-7353	4-methyl-5(&beta;-hydroxyethyl)thiazole salvage (yeast)
GKIL_2465	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
GKIL_2488	PWY-101	photosynthesis light reactions
GKIL_2488	PWY-6785	hydrogen production VIII
GKIL_2489	PWY-101	photosynthesis light reactions
GKIL_2489	PWY-6785	hydrogen production VIII
GKIL_2490	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
GKIL_2491	PWY-6832	2-aminoethylphosphonate degradation II
GKIL_2493	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
GKIL_2493	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
GKIL_2494	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
GKIL_2494	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
GKIL_2496	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
GKIL_2496	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
GKIL_2496	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
GKIL_2497	PWY-6519	8-amino-7-oxononanoate biosynthesis I
GKIL_2497	PWY-6578	8-amino-7-oxononanoate biosynthesis III
GKIL_2497	PWY-7147	8-amino-7-oxononanoate biosynthesis II
GKIL_2503	PWY-4361	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation
GKIL_2503	PWY-7174	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation II
GKIL_2504	PWY-6891	thiazole biosynthesis II (Bacillus)
GKIL_2504	PWY-6892	thiazole biosynthesis I (E. coli)
GKIL_2504	PWY-7560	methylerythritol phosphate pathway II
GKIL_2507	PWY-5367	petroselinate biosynthesis
GKIL_2507	PWY-5971	palmitate biosynthesis II (bacteria and plants)
GKIL_2507	PWY-5973	<i>cis</i>-vaccenate biosynthesis
GKIL_2507	PWY-5989	stearate biosynthesis II (bacteria and plants)
GKIL_2507	PWY-5994	palmitate biosynthesis I (animals and fungi)
GKIL_2507	PWY-6113	superpathway of mycolate biosynthesis
GKIL_2507	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
GKIL_2507	PWY-6519	8-amino-7-oxononanoate biosynthesis I
GKIL_2507	PWY-6951	GKIL_2507
GKIL_2507	PWY-7053	docosahexaenoate biosynthesis I (lower eukaryotes)
GKIL_2507	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
GKIL_2507	PWYG-321	mycolate biosynthesis
GKIL_2511	PWY-5028	L-histidine degradation II
GKIL_2511	PWY-5030	L-histidine degradation III
GKIL_2522	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
GKIL_2522	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
GKIL_2530	PWY-4061	glutathione-mediated detoxification I
GKIL_2530	PWY-6842	glutathione-mediated detoxification II
GKIL_2530	PWY-7112	4-hydroxy-2-nonenal detoxification
GKIL_2530	PWY-7533	gliotoxin biosynthesis
GKIL_2540	PWY-4702	phytate degradation I
GKIL_2546	PWY-43	putrescine biosynthesis II
GKIL_2549	PWY-43	putrescine biosynthesis II
GKIL_2565	PWY-4981	L-proline biosynthesis II (from arginine)
GKIL_2565	PWY-4984	urea cycle
GKIL_2565	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
GKIL_2573	PWY-6349	CDP-archaeol biosynthesis
GKIL_2581	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
GKIL_2581	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
GKIL_2581	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
GKIL_2581	PWY-7206	pyrimidine deoxyribonucleotides dephosphorylation
GKIL_2591	PWY-4041	&gamma;-glutamyl cycle
GKIL_2591	PWY-5826	hypoglycin biosynthesis
GKIL_2601	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
GKIL_2601	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
GKIL_2653	PWY-2301	<i>myo</i>-inositol biosynthesis
GKIL_2653	PWY-4702	phytate degradation I
GKIL_2653	PWY-6363	D-<i>myo</i>-inositol (1,4,5)-trisphosphate degradation
GKIL_2655	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
GKIL_2665	PWY-3781	aerobic respiration I (cytochrome c)
GKIL_2665	PWY-4521	arsenite oxidation I (respiratory)
GKIL_2665	PWY-6692	Fe(II) oxidation
GKIL_2665	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
GKIL_2686	PWY-3461	L-tyrosine biosynthesis II
GKIL_2686	PWY-3462	L-phenylalanine biosynthesis II
GKIL_2686	PWY-6120	L-tyrosine biosynthesis III
GKIL_2686	PWY-6627	salinosporamide A biosynthesis
GKIL_2688	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
GKIL_2688	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
GKIL_2698	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
GKIL_2706	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
GKIL_2706	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
GKIL_2726	PWY-6012	acyl carrier protein metabolism I
GKIL_2726	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
GKIL_2728	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
GKIL_2728	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
GKIL_2730	PWY-101	photosynthesis light reactions
GKIL_2730	PWY-6785	hydrogen production VIII
GKIL_2772	PWY-2161	folate polyglutamylation
GKIL_2775	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
GKIL_2775	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
GKIL_2789	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
GKIL_2789	PWY-622	starch biosynthesis
GKIL_2806	PWY-2582	brassinosteroid biosynthesis II
GKIL_2806	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
GKIL_2806	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
GKIL_2806	PWY-6948	sitosterol degradation to androstenedione
GKIL_2806	PWY-699	brassinosteroid biosynthesis I
GKIL_2806	PWY-7299	progesterone biosynthesis
GKIL_2809	PWY-1042	glycolysis IV (plant cytosol)
GKIL_2809	PWY-1622	formaldehyde assimilation I (serine pathway)
GKIL_2809	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
GKIL_2809	PWY-5484	glycolysis II (from fructose 6-phosphate)
GKIL_2809	PWY-5723	Rubisco shunt
GKIL_2809	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
GKIL_2809	PWY-6886	1-butanol autotrophic biosynthesis
GKIL_2809	PWY-6901	superpathway of glucose and xylose degradation
GKIL_2809	PWY-7003	glycerol degradation to butanol
GKIL_2809	PWY-7124	ethylene biosynthesis V (engineered)
GKIL_2809	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
GKIL_2834	PWY-3801	sucrose degradation II (sucrose synthase)
GKIL_2837	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
GKIL_2837	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
GKIL_2837	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
GKIL_2838	PWY-6823	molybdenum cofactor biosynthesis
GKIL_2876	PWY-2723	trehalose degradation V
GKIL_2876	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
GKIL_2876	PWY-5661	GDP-glucose biosynthesis
GKIL_2876	PWY-7238	sucrose biosynthesis II
GKIL_2876	PWY-7385	1,3-propanediol biosynthesis (engineered)
GKIL_2877	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
GKIL_2877	PWY-5912	2'-deoxymugineic acid phytosiderophore biosynthesis
GKIL_2880	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
GKIL_2881	PWY-5194	siroheme biosynthesis
GKIL_2881	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
GKIL_2914	PWY-3781	aerobic respiration I (cytochrome c)
GKIL_2914	PWY-4302	aerobic respiration III (alternative oxidase pathway)
GKIL_2914	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
GKIL_2914	PWY-5690	TCA cycle II (plants and fungi)
GKIL_2914	PWY-6728	methylaspartate cycle
GKIL_2914	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
GKIL_2914	PWY-7254	TCA cycle VII (acetate-producers)
GKIL_2914	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
GKIL_2946	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
GKIL_2946	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
GKIL_2954	PWY-6164	3-dehydroquinate biosynthesis I
GKIL_2957	PWY-6936	seleno-amino acid biosynthesis
GKIL_2957	PWY-7274	D-cycloserine biosynthesis
GKIL_2959	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
GKIL_2959	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
GKIL_2959	PWY-6164	3-dehydroquinate biosynthesis I
GKIL_2981	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
GKIL_3003	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
GKIL_3003	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
GKIL_3003	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
GKIL_3017	PWY-3781	aerobic respiration I (cytochrome c)
GKIL_3017	PWY-4521	arsenite oxidation I (respiratory)
GKIL_3017	PWY-6692	Fe(II) oxidation
GKIL_3017	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
GKIL_3026	PWY-3781	aerobic respiration I (cytochrome c)
GKIL_3026	PWY-4521	arsenite oxidation I (respiratory)
GKIL_3026	PWY-6692	Fe(II) oxidation
GKIL_3026	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
GKIL_3032	PWY-621	sucrose degradation III (sucrose invertase)
GKIL_3040	PWY-5386	methylglyoxal degradation I
GKIL_3044	PWY-5941	glycogen degradation II (eukaryotic)
GKIL_3044	PWY-622	starch biosynthesis
GKIL_3044	PWY-6731	starch degradation III
GKIL_3044	PWY-6737	starch degradation V
GKIL_3044	PWY-7238	sucrose biosynthesis II
GKIL_3073	PWY-5651	L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
GKIL_3073	PWY-6309	L-tryptophan degradation XI (mammalian, via kynurenine)
GKIL_3079	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
GKIL_3079	PWY-7328	superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
GKIL_3089	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
GKIL_3090	PWY-5101	L-isoleucine biosynthesis II
GKIL_3090	PWY-5103	L-isoleucine biosynthesis III
GKIL_3090	PWY-5104	L-isoleucine biosynthesis IV
GKIL_3090	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
GKIL_3090	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
GKIL_3090	PWY-6389	(<i>S</i>)-acetoin biosynthesis
GKIL_3090	PWY-7111	pyruvate fermentation to isobutanol (engineered)
GKIL_3091	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
GKIL_3096	PWY-5958	acridone alkaloid biosynthesis
GKIL_3096	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
GKIL_3096	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
GKIL_3098	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
GKIL_3098	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
GKIL_3105	PWY-6683	sulfate reduction III (assimilatory)
GKIL_3117	PWY-5686	UMP biosynthesis
GKIL_3129	PWY-6672	<i>cis</i>-genanyl-CoA degradation
GKIL_3129	PWY-7118	chitin degradation to ethanol
GKIL_3153	PWY-3221	dTDP-L-rhamnose biosynthesis II
GKIL_3153	PWY-6808	dTDP-D-forosamine biosynthesis
GKIL_3153	PWY-6942	dTDP-D-desosamine biosynthesis
GKIL_3153	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
GKIL_3153	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
GKIL_3153	PWY-6974	dTDP-L-olivose biosynthesis
GKIL_3153	PWY-6976	dTDP-L-mycarose biosynthesis
GKIL_3153	PWY-7104	dTDP-L-megosamine biosynthesis
GKIL_3153	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
GKIL_3153	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
GKIL_3153	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
GKIL_3153	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
GKIL_3153	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
GKIL_3153	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
GKIL_3153	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
GKIL_3153	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
GKIL_3177	PWY-6614	tetrahydrofolate biosynthesis
GKIL_3202	PWY-7183	pyrimidine nucleobases salvage I
GKIL_3211	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
GKIL_3215	PWY-5988	wound-induced proteolysis I
GKIL_3215	PWY-6018	seed germination protein turnover
GKIL_3225	PWY-6938	NADH repair
GKIL_3232	PWY-5381	pyridine nucleotide cycling (plants)
GKIL_3235	PWY-5686	UMP biosynthesis
GKIL_3285	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
GKIL_3285	PWY-5686	UMP biosynthesis
GKIL_3285	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
GKIL_3289	PWY-7560	methylerythritol phosphate pathway II
GKIL_3302	PWY-5958	acridone alkaloid biosynthesis
GKIL_3302	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
GKIL_3302	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
GKIL_3305	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
GKIL_3305	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
GKIL_3314	PWY-2781	<i>cis</i>-zeatin biosynthesis
GKIL_3326	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
GKIL_3326	PWY-6416	quinate degradation II
GKIL_3326	PWY-6707	gallate biosynthesis
GKIL_3332	PWY-5097	L-lysine biosynthesis VI
GKIL_3346	PWY-6749	CMP-legionaminate biosynthesis I
GKIL_3355	PWY-3841	folate transformations II
GKIL_3355	PWY-6614	tetrahydrofolate biosynthesis
GKIL_3379	PWY-6854	ethylene biosynthesis III (microbes)
GKIL_3386	PWY-6871	3-methylbutanol biosynthesis
GKIL_3412	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
GKIL_3412	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
GKIL_3437	PWY-2941	L-lysine biosynthesis II
GKIL_3437	PWY-2942	L-lysine biosynthesis III
GKIL_3437	PWY-5097	L-lysine biosynthesis VI
GKIL_3437	PWY-6559	spermidine biosynthesis II
GKIL_3437	PWY-6562	norspermidine biosynthesis
GKIL_3437	PWY-7153	grixazone biosynthesis
GKIL_3444	PWY-5484	glycolysis II (from fructose 6-phosphate)
GKIL_3448	PWY-6823	molybdenum cofactor biosynthesis
GKIL_3448	PWY-6891	thiazole biosynthesis II (Bacillus)
GKIL_3448	PWY-6892	thiazole biosynthesis I (E. coli)
GKIL_3448	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
GKIL_3459	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
GKIL_3463	PWY-6823	molybdenum cofactor biosynthesis
GKIL_3464	PWY-1622	formaldehyde assimilation I (serine pathway)
GKIL_3464	PWY-181	photorespiration
GKIL_3464	PWY-2161	folate polyglutamylation
GKIL_3464	PWY-2201	folate transformations I
GKIL_3464	PWY-3661	glycine betaine degradation I
GKIL_3464	PWY-3661-1	glycine betaine degradation II (mammalian)
GKIL_3464	PWY-3841	folate transformations II
GKIL_3464	PWY-5497	purine nucleobases degradation II (anaerobic)
GKIL_3497	PWY-2941	L-lysine biosynthesis II
GKIL_3497	PWY-2942	L-lysine biosynthesis III
GKIL_3497	PWY-5097	L-lysine biosynthesis VI
GKIL_3523	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
GKIL_3523	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
GKIL_3523	PWY-5194	siroheme biosynthesis
GKIL_3523	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
GKIL_3533	PWY-5057	L-valine degradation II
GKIL_3533	PWY-5076	L-leucine degradation III
GKIL_3533	PWY-5078	L-isoleucine degradation II
GKIL_3533	PWY-5101	L-isoleucine biosynthesis II
GKIL_3533	PWY-5103	L-isoleucine biosynthesis III
GKIL_3533	PWY-5104	L-isoleucine biosynthesis IV
GKIL_3533	PWY-5108	L-isoleucine biosynthesis V
GKIL_3541	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
GKIL_3541	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
GKIL_3552	PWY-5101	L-isoleucine biosynthesis II
GKIL_3552	PWY-5103	L-isoleucine biosynthesis III
GKIL_3552	PWY-5104	L-isoleucine biosynthesis IV
GKIL_3552	PWY-7111	pyruvate fermentation to isobutanol (engineered)
GKIL_3562	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
GKIL_3564	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
GKIL_3564	PWY-6855	chitin degradation I (archaea)
GKIL_3564	PWY-6906	chitin derivatives degradation
GKIL_3568	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
GKIL_3570	PWY-1042	glycolysis IV (plant cytosol)
GKIL_3570	PWY-5484	glycolysis II (from fructose 6-phosphate)
GKIL_3570	PWY-6886	1-butanol autotrophic biosynthesis
GKIL_3570	PWY-6901	superpathway of glucose and xylose degradation
GKIL_3570	PWY-7003	glycerol degradation to butanol
GKIL_3578	PWY-5482	pyruvate fermentation to acetate II
GKIL_3578	PWY-5485	pyruvate fermentation to acetate IV
GKIL_3578	PWY-5497	purine nucleobases degradation II (anaerobic)
GKIL_3589	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
GKIL_3589	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
GKIL_3601	PWY-2941	L-lysine biosynthesis II
GKIL_3601	PWY-2942	L-lysine biosynthesis III
GKIL_3601	PWY-5097	L-lysine biosynthesis VI
GKIL_3615	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
GKIL_3615	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
GKIL_3618	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
GKIL_3618	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
GKIL_3622	PWY-5941	glycogen degradation II (eukaryotic)
GKIL_3622	PWY-6724	starch degradation II
GKIL_3622	PWY-6737	starch degradation V
GKIL_3622	PWY-7238	sucrose biosynthesis II
GKIL_3625	PWY-5686	UMP biosynthesis
GKIL_3640	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
GKIL_3640	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
GKIL_3647	PWY-5155	&beta;-alanine biosynthesis III
GKIL_3649	PWY-723	alkylnitronates degradation
GKIL_3650	PWY-6012	acyl carrier protein metabolism I
GKIL_3650	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
GKIL_3654	PWY-842	starch degradation I
GKIL_3658	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
GKIL_3658	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
GKIL_3658	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
GKIL_3677	PWY-101	photosynthesis light reactions
GKIL_3677	PWY-6785	hydrogen production VIII
GKIL_3689	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
GKIL_3689	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
GKIL_3689	PWY-6164	3-dehydroquinate biosynthesis I
GKIL_3692	PWY-7560	methylerythritol phosphate pathway II
GKIL_3720	PWY-5964	guanylyl molybdenum cofactor biosynthesis
GKIL_3721	PWY-5839	menaquinol-7 biosynthesis
GKIL_3721	PWY-5844	menaquinol-9 biosynthesis
GKIL_3721	PWY-5849	menaquinol-6 biosynthesis
GKIL_3721	PWY-5890	menaquinol-10 biosynthesis
GKIL_3721	PWY-5891	menaquinol-11 biosynthesis
GKIL_3721	PWY-5892	menaquinol-12 biosynthesis
GKIL_3721	PWY-5895	menaquinol-13 biosynthesis
GKIL_3735	PWY-6840	homoglutathione biosynthesis
GKIL_3735	PWY-7255	ergothioneine biosynthesis I (bacteria)
GKIL_3739	PWY-5101	L-isoleucine biosynthesis II
GKIL_3739	PWY-5103	L-isoleucine biosynthesis III
GKIL_3739	PWY-5104	L-isoleucine biosynthesis IV
GKIL_3739	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
GKIL_3739	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
GKIL_3739	PWY-6389	(<i>S</i>)-acetoin biosynthesis
GKIL_3739	PWY-7111	pyruvate fermentation to isobutanol (engineered)
GKIL_3755	PWY-1622	formaldehyde assimilation I (serine pathway)
GKIL_3755	PWY-5484	glycolysis II (from fructose 6-phosphate)
GKIL_3787	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
GKIL_3787	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
GKIL_3787	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
GKIL_3787	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
GKIL_3788	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
GKIL_3788	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
GKIL_3788	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
GKIL_3795	PWY-6891	thiazole biosynthesis II (Bacillus)
GKIL_3795	PWY-6892	thiazole biosynthesis I (E. coli)
GKIL_3795	PWY-7560	methylerythritol phosphate pathway II
GKIL_3800	PWY-5941	glycogen degradation II (eukaryotic)
GKIL_3800	PWY-6724	starch degradation II
GKIL_3800	PWY-6737	starch degradation V
GKIL_3800	PWY-7238	sucrose biosynthesis II
GKIL_3835	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
GKIL_3835	PWY-6148	tetrahydromethanopterin biosynthesis
GKIL_3835	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
GKIL_3835	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
GKIL_3860	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
GKIL_3860	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
GKIL_3860	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
GKIL_3860	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
GKIL_3860	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
GKIL_3860	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
GKIL_3862	PWY-4041	&gamma;-glutamyl cycle
GKIL_3862	PWY-5826	hypoglycin biosynthesis
GKIL_3863	PWY-5506	methanol oxidation to formaldehyde IV
GKIL_3871	PWY-7335	UDP-<i>N</i>-acetyl-&alpha;-D-mannosaminouronate biosynthesis
GKIL_3872	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
GKIL_3874	PWY-3341	L-proline biosynthesis III
GKIL_3874	PWY-4981	L-proline biosynthesis II (from arginine)
GKIL_3874	PWY-6344	L-ornithine degradation II (Stickland reaction)
GKIL_3878	PWY-5686	UMP biosynthesis
GKIL_3887	PWY-3781	aerobic respiration I (cytochrome c)
GKIL_3887	PWY-4521	arsenite oxidation I (respiratory)
GKIL_3887	PWY-6692	Fe(II) oxidation
GKIL_3887	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
GKIL_3892	PWY-5278	sulfite oxidation III
GKIL_3892	PWY-5340	sulfate activation for sulfonation
GKIL_3892	PWY-6683	sulfate reduction III (assimilatory)
GKIL_3892	PWY-6932	selenate reduction
GKIL_3893	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
GKIL_3920	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
GKIL_3921	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
GKIL_3922	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
GKIL_3922	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
GKIL_3922	PWY-6268	adenosylcobalamin salvage from cobalamin
GKIL_3922	PWY-6269	adenosylcobalamin salvage from cobinamide II
GKIL_3932	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
GKIL_3932	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
GKIL_3932	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
GKIL_3933	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
GKIL_3933	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
GKIL_3934	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
GKIL_3934	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
GKIL_3938	PWY-5686	UMP biosynthesis
GKIL_3949	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
GKIL_3949	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
GKIL_3949	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
GKIL_3957	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
GKIL_3960	PWY-1042	glycolysis IV (plant cytosol)
GKIL_3960	PWY-5484	glycolysis II (from fructose 6-phosphate)
GKIL_3960	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
GKIL_3960	PWY-7003	glycerol degradation to butanol
GKIL_3962	PWY-6167	flavin biosynthesis II (archaea)
GKIL_3962	PWY-6168	flavin biosynthesis III (fungi)
GKIL_3976	PWY-622	starch biosynthesis
GKIL_3979	PWY-6906	chitin derivatives degradation
GKIL_3979	PWY-7077	<i>N</i>-acetyl-D-galactosamine degradation
GKIL_3979	PWY-7395	D-galactosamine and <i>N</i>-acetyl-D-galactosamine degradation
GKIL_3988	PWY-5381	pyridine nucleotide cycling (plants)
GKIL_3988	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
GKIL_3991	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
GKIL_3991	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
GKIL_3991	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
GKIL_3991	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
GKIL_4012	PWY-5484	glycolysis II (from fructose 6-phosphate)
GKIL_4022	PWY-5316	nicotine biosynthesis
GKIL_4022	PWY-7342	superpathway of nicotine biosynthesis
GKIL_4023	PWY-101	photosynthesis light reactions
GKIL_4023	PWY-6785	hydrogen production VIII
GKIL_4032	PWY-5451	acetone degradation I (to methylglyoxal)
GKIL_4032	PWY-6588	pyruvate fermentation to acetone
GKIL_4032	PWY-6876	isopropanol biosynthesis
GKIL_4032	PWY-7466	acetone degradation III (to propane-1,2-diol)
GKIL_4035	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
GKIL_4035	PWY-622	starch biosynthesis
GKIL_4070	PWY-6749	CMP-legionaminate biosynthesis I
GKIL_4106	PWY-7238	sucrose biosynthesis II
GKIL_4106	PWY-7347	sucrose biosynthesis III
GKIL_4119	PWY-2941	L-lysine biosynthesis II
GKIL_4119	PWY-2942	L-lysine biosynthesis III
GKIL_4119	PWY-5097	L-lysine biosynthesis VI
GKIL_4120	PWY-2941	L-lysine biosynthesis II
GKIL_4120	PWY-2942	L-lysine biosynthesis III
GKIL_4120	PWY-5097	L-lysine biosynthesis VI
GKIL_4120	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
GKIL_4120	PWY-6559	spermidine biosynthesis II
GKIL_4120	PWY-6562	norspermidine biosynthesis
GKIL_4120	PWY-7153	grixazone biosynthesis
GKIL_4120	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
GKIL_4211	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
GKIL_4211	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
GKIL_4211	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
GKIL_4211	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
GKIL_4220	PWY-5030	L-histidine degradation III
GKIL_4220	PWY-5497	purine nucleobases degradation II (anaerobic)
GKIL_4221	PWY-5030	L-histidine degradation III
GKIL_4222	PWY-5028	L-histidine degradation II
GKIL_4222	PWY-5030	L-histidine degradation III
GKIL_4223	PWY-5028	L-histidine degradation II
GKIL_4223	PWY-5030	L-histidine degradation III
GKIL_4239	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
GKIL_4239	PWY-5723	Rubisco shunt
GKIL_4240	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
GKIL_4240	PWY-5723	Rubisco shunt
GKIL_4241	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
GKIL_4241	PWY-6855	chitin degradation I (archaea)
GKIL_4241	PWY-6906	chitin derivatives degradation
GKIL_4244	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
GKIL_4246	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
GKIL_4246	PWY-3801	sucrose degradation II (sucrose synthase)
GKIL_4246	PWY-5054	sorbitol biosynthesis I
GKIL_4246	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
GKIL_4246	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
GKIL_4246	PWY-5659	GDP-mannose biosynthesis
GKIL_4246	PWY-5723	Rubisco shunt
GKIL_4246	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
GKIL_4246	PWY-621	sucrose degradation III (sucrose invertase)
GKIL_4246	PWY-622	starch biosynthesis
GKIL_4246	PWY-6531	mannitol cycle
GKIL_4246	PWY-6981	chitin biosynthesis
GKIL_4246	PWY-7238	sucrose biosynthesis II
GKIL_4246	PWY-7347	sucrose biosynthesis III
GKIL_4246	PWY-7385	1,3-propanediol biosynthesis (engineered)
GKIL_4247	PWY-5767	GKIL_4247
GKIL_4256	PWY-842	starch degradation I
GKIL_4266	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
GKIL_4266	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
GKIL_4266	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
GKIL_4296	PWY-5915	phycoerythrobilin biosynthesis I
GKIL_4340	PWY-5340	sulfate activation for sulfonation
GKIL_4386	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
GKIL_4386	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
GKIL_4424	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
GKIL_4432	PWY-101	photosynthesis light reactions
GKIL_4432	PWY-6785	hydrogen production VIII
GKIL_4466	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
