Hden_0020	PWY-4981	L-proline biosynthesis II (from arginine)
Hden_0020	PWY-4984	urea cycle
Hden_0020	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Hden_0023	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Hden_0026	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
Hden_0035	PWY-4983	L-citrulline-nitric oxide cycle
Hden_0035	PWY-4984	urea cycle
Hden_0035	PWY-5	canavanine biosynthesis
Hden_0035	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Hden_0035	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Hden_0037	PWY-2941	L-lysine biosynthesis II
Hden_0037	PWY-2942	L-lysine biosynthesis III
Hden_0037	PWY-5097	L-lysine biosynthesis VI
Hden_0089	PWY-6012	acyl carrier protein metabolism I
Hden_0089	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
Hden_0092	PWY-3821	galactose degradation III
Hden_0092	PWY-6317	galactose degradation I (Leloir pathway)
Hden_0092	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
Hden_0092	PWY-6527	stachyose degradation
Hden_0092	PWY-7328	superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
Hden_0092	PWY-7344	UDP-D-galactose biosynthesis
Hden_0100	PWY-66	GDP-L-fucose biosynthesis I (from GDP-D-mannose)
Hden_0101	PWY-5738	GDP-6-deoxy-D-talose biosynthesis
Hden_0101	PWY-5739	GDP-D-perosamine biosynthesis
Hden_0101	PWY-5740	GDP-L-colitose biosynthesis
Hden_0101	PWY-66	GDP-L-fucose biosynthesis I (from GDP-D-mannose)
Hden_0103	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
Hden_0103	PWY-2201	folate transformations I
Hden_0103	PWY-3841	folate transformations II
Hden_0103	PWY-5030	L-histidine degradation III
Hden_0103	PWY-5497	purine nucleobases degradation II (anaerobic)
Hden_0103	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
Hden_0104	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
Hden_0104	PWY-2161	folate polyglutamylation
Hden_0104	PWY-2201	folate transformations I
Hden_0104	PWY-3841	folate transformations II
Hden_0185	PWY-3821	galactose degradation III
Hden_0185	PWY-6317	galactose degradation I (Leloir pathway)
Hden_0185	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
Hden_0185	PWY-6527	stachyose degradation
Hden_0185	PWY-7328	superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
Hden_0185	PWY-7344	UDP-D-galactose biosynthesis
Hden_0187	PWY-7335	UDP-<i>N</i>-acetyl-&alpha;-D-mannosaminouronate biosynthesis
Hden_0195	PWY-5692	allantoin degradation to glyoxylate II
Hden_0195	PWY-5698	allantoin degradation to ureidoglycolate II (ammonia producing)
Hden_0208	PWY-5381	pyridine nucleotide cycling (plants)
Hden_0208	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
Hden_0218	PWY-5743	3-hydroxypropanoate cycle
Hden_0218	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Hden_0218	PWY-6728	methylaspartate cycle
Hden_0218	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Hden_0239	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Hden_0239	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Hden_0240	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
Hden_0240	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
Hden_0240	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
Hden_0241	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Hden_0241	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Hden_0243	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
Hden_0243	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
Hden_0243	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
Hden_0243	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
Hden_0244	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Hden_0244	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Hden_0245	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Hden_0245	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Hden_0246	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Hden_0246	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Hden_0262	PWY-5392	reductive TCA cycle II
Hden_0262	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
Hden_0262	PWY-5690	TCA cycle II (plants and fungi)
Hden_0262	PWY-5913	TCA cycle VI (obligate autotrophs)
Hden_0262	PWY-6728	methylaspartate cycle
Hden_0262	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Hden_0262	PWY-7254	TCA cycle VII (acetate-producers)
Hden_0262	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Hden_0268	PWY-3841	folate transformations II
Hden_0268	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Hden_0268	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
Hden_0268	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
Hden_0268	PWY-7199	pyrimidine deoxyribonucleosides salvage
Hden_0268	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
Hden_0270	PWY-3841	folate transformations II
Hden_0270	PWY-6614	tetrahydrofolate biosynthesis
Hden_0275	PWY-5669	phosphatidylethanolamine biosynthesis I
Hden_0276	PWY-5669	phosphatidylethanolamine biosynthesis I
Hden_0277	PWY-5659	GDP-mannose biosynthesis
Hden_0277	PWY-6073	alginate biosynthesis I (algal)
Hden_0277	PWY-6082	alginate biosynthesis II (bacterial)
Hden_0277	PWY-882	L-ascorbate biosynthesis I (L-galactose pathway)
Hden_0289	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
Hden_0290	PWY-6832	2-aminoethylphosphonate degradation II
Hden_0326	PWY-5988	wound-induced proteolysis I
Hden_0326	PWY-6018	seed germination protein turnover
Hden_0365	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
Hden_0417	PWY-5686	UMP biosynthesis
Hden_0420	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Hden_0472	PWY-5152	leucodelphinidin biosynthesis
Hden_0477	PWY-6098	diploterol and cycloartenol biosynthesis
Hden_0477	PWY-7072	hopanoid biosynthesis (bacteria)
Hden_0480	PWY-7560	methylerythritol phosphate pathway II
Hden_0483	PWY-5129	sphingolipid biosynthesis (plants)
Hden_0486	PWY-6891	thiazole biosynthesis II (Bacillus)
Hden_0486	PWY-6892	thiazole biosynthesis I (E. coli)
Hden_0486	PWY-7560	methylerythritol phosphate pathway II
Hden_0488	PWY-5129	sphingolipid biosynthesis (plants)
Hden_0501	PWY-3221	dTDP-L-rhamnose biosynthesis II
Hden_0501	PWY-6808	dTDP-D-forosamine biosynthesis
Hden_0501	PWY-6942	dTDP-D-desosamine biosynthesis
Hden_0501	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
Hden_0501	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
Hden_0501	PWY-6974	dTDP-L-olivose biosynthesis
Hden_0501	PWY-6976	dTDP-L-mycarose biosynthesis
Hden_0501	PWY-7104	dTDP-L-megosamine biosynthesis
Hden_0501	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
Hden_0501	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
Hden_0501	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
Hden_0501	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
Hden_0501	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
Hden_0501	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
Hden_0501	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
Hden_0501	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
Hden_0502	PWY-3221	dTDP-L-rhamnose biosynthesis II
Hden_0502	PWY-6808	dTDP-D-forosamine biosynthesis
Hden_0502	PWY-6942	dTDP-D-desosamine biosynthesis
Hden_0502	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
Hden_0502	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
Hden_0502	PWY-6974	dTDP-L-olivose biosynthesis
Hden_0502	PWY-6976	dTDP-L-mycarose biosynthesis
Hden_0502	PWY-7104	dTDP-L-megosamine biosynthesis
Hden_0502	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
Hden_0502	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
Hden_0502	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
Hden_0502	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
Hden_0502	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
Hden_0502	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
Hden_0502	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
Hden_0502	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
Hden_0515	PWY-381	nitrate reduction II (assimilatory)
Hden_0515	PWY-5675	nitrate reduction V (assimilatory)
Hden_0515	PWY-6549	L-glutamine biosynthesis III
Hden_0515	PWY-6963	ammonia assimilation cycle I
Hden_0515	PWY-6964	ammonia assimilation cycle II
Hden_0525	PWY-5506	methanol oxidation to formaldehyde IV
Hden_0559	PWY-5971	palmitate biosynthesis II (bacteria and plants)
Hden_0559	PWY-5973	<i>cis</i>-vaccenate biosynthesis
Hden_0559	PWY-5989	stearate biosynthesis II (bacteria and plants)
Hden_0559	PWY-5994	palmitate biosynthesis I (animals and fungi)
Hden_0559	PWY-6113	superpathway of mycolate biosynthesis
Hden_0559	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
Hden_0559	PWY-6519	8-amino-7-oxononanoate biosynthesis I
Hden_0559	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Hden_0559	PWYG-321	mycolate biosynthesis
Hden_0582	PWY-3781	aerobic respiration I (cytochrome c)
Hden_0582	PWY-4521	arsenite oxidation I (respiratory)
Hden_0582	PWY-6692	Fe(II) oxidation
Hden_0582	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Hden_0591	PWY-6523	nitrite-dependent anaerobic methane oxidation
Hden_0591	PWY-6748	nitrate reduction VII (denitrification)
Hden_0591	PWY-7084	nitrifier denitrification
Hden_0613	PWY-5101	L-isoleucine biosynthesis II
Hden_0613	PWY-5103	L-isoleucine biosynthesis III
Hden_0613	PWY-5104	L-isoleucine biosynthesis IV
Hden_0613	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Hden_0635	PWY-5686	UMP biosynthesis
Hden_0636	PWY-5686	UMP biosynthesis
Hden_0640	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
Hden_0641	PWY-3461	L-tyrosine biosynthesis II
Hden_0641	PWY-3462	L-phenylalanine biosynthesis II
Hden_0641	PWY-6120	L-tyrosine biosynthesis III
Hden_0641	PWY-6627	salinosporamide A biosynthesis
Hden_0671	PWY-5443	aminopropanol phosphate biosynthesis I
Hden_0686	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
Hden_0686	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
Hden_0737	PWY-5344	L-homocysteine biosynthesis
Hden_0759	PWY-6823	molybdenum cofactor biosynthesis
Hden_0759	PWY-6891	thiazole biosynthesis II (Bacillus)
Hden_0759	PWY-6892	thiazole biosynthesis I (E. coli)
Hden_0759	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
Hden_0775	PWY-381	nitrate reduction II (assimilatory)
Hden_0775	PWY-5675	nitrate reduction V (assimilatory)
Hden_0775	PWY-6549	L-glutamine biosynthesis III
Hden_0775	PWY-6963	ammonia assimilation cycle I
Hden_0775	PWY-6964	ammonia assimilation cycle II
Hden_0788	PWY-6891	thiazole biosynthesis II (Bacillus)
Hden_0788	PWY-6892	thiazole biosynthesis I (E. coli)
Hden_0791	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
Hden_0791	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
Hden_0794	PWY-6890	4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis
Hden_0804	PWY-5451	acetone degradation I (to methylglyoxal)
Hden_0804	PWY-6588	pyruvate fermentation to acetone
Hden_0804	PWY-6876	isopropanol biosynthesis
Hden_0804	PWY-7466	acetone degradation III (to propane-1,2-diol)
Hden_0808	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
Hden_0808	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Hden_0808	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
Hden_0808	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
Hden_0808	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Hden_0808	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Hden_0808	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
Hden_0808	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
Hden_0809	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
Hden_0809	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Hden_0809	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
Hden_0809	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
Hden_0809	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Hden_0809	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Hden_0809	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
Hden_0809	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
Hden_0825	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
Hden_0825	PWY-6596	adenosine nucleotides degradation I
Hden_0825	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
Hden_0831	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
Hden_0839	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Hden_0839	PWY-6416	quinate degradation II
Hden_0839	PWY-6707	gallate biosynthesis
Hden_0855	PWY-6654	phosphopantothenate biosynthesis III
Hden_0894	PWY-6891	thiazole biosynthesis II (Bacillus)
Hden_0894	PWY-6892	thiazole biosynthesis I (E. coli)
Hden_0894	PWY-7560	methylerythritol phosphate pathway II
Hden_0896	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
Hden_0896	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
Hden_0950	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
Hden_0950	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Hden_0950	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
Hden_0950	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
Hden_0950	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Hden_0950	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Hden_0950	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
Hden_0950	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
Hden_0953	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Hden_0953	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
Hden_0959	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
Hden_0959	PWY-7536	2-amino-3-hydroxycyclopent-2-enone biosynthesis
Hden_0960	PWY-1622	formaldehyde assimilation I (serine pathway)
Hden_0960	PWY-181	photorespiration
Hden_0960	PWY-2161	folate polyglutamylation
Hden_0960	PWY-2201	folate transformations I
Hden_0960	PWY-3661	glycine betaine degradation I
Hden_0960	PWY-3661-1	glycine betaine degradation II (mammalian)
Hden_0960	PWY-3841	folate transformations II
Hden_0960	PWY-5497	purine nucleobases degradation II (anaerobic)
Hden_0963	PWY-6167	flavin biosynthesis II (archaea)
Hden_0963	PWY-6168	flavin biosynthesis III (fungi)
Hden_0963	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Hden_0964	PWY-6167	flavin biosynthesis II (archaea)
Hden_0964	PWY-6168	flavin biosynthesis III (fungi)
Hden_0964	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
Hden_0965	PWY-6167	flavin biosynthesis II (archaea)
Hden_0965	PWY-6168	flavin biosynthesis III (fungi)
Hden_0967	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
Hden_0967	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
Hden_0967	PWY-6896	thiamin salvage I
Hden_0967	PWY-6897	thiamin salvage II
Hden_0975	PWY-381	nitrate reduction II (assimilatory)
Hden_0975	PWY-5675	nitrate reduction V (assimilatory)
Hden_0975	PWY-6549	L-glutamine biosynthesis III
Hden_0975	PWY-6963	ammonia assimilation cycle I
Hden_0975	PWY-6964	ammonia assimilation cycle II
Hden_0989	PWY-5123	<i>trans, trans</i>-farnesyl diphosphate biosynthesis
Hden_0989	PWY-6174	mevalonate pathway II (archaea)
Hden_0989	PWY-6383	mono-<i>trans</i>, poly-<i>cis</i> decaprenyl phosphate biosynthesis
Hden_0989	PWY-6859	<i>all-trans</i>-farnesol biosynthesis
Hden_0989	PWY-7102	bisabolene biosynthesis
Hden_0989	PWY-7391	isoprene biosynthesis II (engineered)
Hden_0989	PWY-7524	mevalonate pathway III (archaea)
Hden_0989	PWY-7560	methylerythritol phosphate pathway II
Hden_0989	PWY-922	mevalonate pathway I
Hden_0996	PWY-723	alkylnitronates degradation
Hden_1038	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Hden_1046	PWY-5278	sulfite oxidation III
Hden_1046	PWY-5340	sulfate activation for sulfonation
Hden_1046	PWY-6683	sulfate reduction III (assimilatory)
Hden_1046	PWY-6932	selenate reduction
Hden_1047	PWY-5278	sulfite oxidation III
Hden_1047	PWY-5340	sulfate activation for sulfonation
Hden_1047	PWY-6683	sulfate reduction III (assimilatory)
Hden_1047	PWY-6932	selenate reduction
Hden_1082	PWY-6936	seleno-amino acid biosynthesis
Hden_1088	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
Hden_1088	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
Hden_1088	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
Hden_1142	PWY-6562	norspermidine biosynthesis
Hden_1253	PWY-5101	L-isoleucine biosynthesis II
Hden_1253	PWY-5103	L-isoleucine biosynthesis III
Hden_1253	PWY-5104	L-isoleucine biosynthesis IV
Hden_1253	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Hden_1265	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
Hden_1267	PWY-5381	pyridine nucleotide cycling (plants)
Hden_1267	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
Hden_1267	PWY-6596	adenosine nucleotides degradation I
Hden_1267	PWY-6606	guanosine nucleotides degradation II
Hden_1267	PWY-6607	guanosine nucleotides degradation I
Hden_1267	PWY-6608	guanosine nucleotides degradation III
Hden_1267	PWY-7185	UTP and CTP dephosphorylation I
Hden_1292	PWY-4381	fatty acid biosynthesis initiation I
Hden_1295	PWY-6012	acyl carrier protein metabolism I
Hden_1295	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
Hden_1300	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
Hden_1300	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
Hden_1320	PWY-6966	methanol oxidation to formaldehyde I
Hden_1344	PWY-6012	acyl carrier protein metabolism I
Hden_1344	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
Hden_1357	PWY-6655	xanthan biosynthesis
Hden_1357	PWY-6658	acetan biosynthesis
Hden_1369	PWY-5941	glycogen degradation II (eukaryotic)
Hden_1369	PWY-6724	starch degradation II
Hden_1369	PWY-6737	starch degradation V
Hden_1369	PWY-7238	sucrose biosynthesis II
Hden_1373	PWY-6854	ethylene biosynthesis III (microbes)
Hden_1379	PWY-6655	xanthan biosynthesis
Hden_1379	PWY-6658	acetan biosynthesis
Hden_1386	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Hden_1386	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Hden_1395	PWY-6168	flavin biosynthesis III (fungi)
Hden_1395	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
Hden_1397	PWY-5101	L-isoleucine biosynthesis II
Hden_1397	PWY-6871	3-methylbutanol biosynthesis
Hden_1401	PWY-5274	sulfide oxidation II (sulfide dehydrogenase)
Hden_1403	PWY-1361	benzoyl-CoA degradation I (aerobic)
Hden_1403	PWY-5109	2-methylbutanoate biosynthesis
Hden_1403	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
Hden_1403	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
Hden_1403	PWY-5177	glutaryl-CoA degradation
Hden_1403	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Hden_1403	PWY-6435	4-hydroxybenzoate biosynthesis V
Hden_1403	PWY-6583	pyruvate fermentation to butanol I
Hden_1403	PWY-6863	pyruvate fermentation to hexanol
Hden_1403	PWY-6883	pyruvate fermentation to butanol II
Hden_1403	PWY-6944	androstenedione degradation
Hden_1403	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
Hden_1403	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
Hden_1403	PWY-7007	methyl ketone biosynthesis
Hden_1403	PWY-7046	4-coumarate degradation (anaerobic)
Hden_1403	PWY-7094	fatty acid salvage
Hden_1403	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
Hden_1403	PWY-735	jasmonic acid biosynthesis
Hden_1403	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
Hden_1411	PWY-6654	phosphopantothenate biosynthesis III
Hden_1417	PWY-3841	folate transformations II
Hden_1417	PWY-6614	tetrahydrofolate biosynthesis
Hden_1424	PWY-381	nitrate reduction II (assimilatory)
Hden_1424	PWY-5675	nitrate reduction V (assimilatory)
Hden_1424	PWY-6549	L-glutamine biosynthesis III
Hden_1424	PWY-6963	ammonia assimilation cycle I
Hden_1424	PWY-6964	ammonia assimilation cycle II
Hden_1436	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
Hden_1439	PWY-6823	molybdenum cofactor biosynthesis
Hden_1443	PWY-5958	acridone alkaloid biosynthesis
Hden_1443	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
Hden_1443	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
Hden_1446	PWY-5958	acridone alkaloid biosynthesis
Hden_1446	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
Hden_1446	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
Hden_1448	PWY-1042	glycolysis IV (plant cytosol)
Hden_1448	PWY-5484	glycolysis II (from fructose 6-phosphate)
Hden_1448	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Hden_1448	PWY-7003	glycerol degradation to butanol
Hden_1453	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
Hden_1453	PWY-7177	UTP and CTP dephosphorylation II
Hden_1453	PWY-7185	UTP and CTP dephosphorylation I
Hden_1455	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
Hden_1455	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
Hden_1467	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
Hden_1467	PWY-6148	tetrahydromethanopterin biosynthesis
Hden_1467	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
Hden_1467	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
Hden_1474	PWY-1723	formaldehyde oxidation V (H<sub>4</sub>MPT pathway)
Hden_1474	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Hden_1475	PWY-5796	malonate decarboxylase activation
Hden_1477	PWY-1723	formaldehyde oxidation V (H<sub>4</sub>MPT pathway)
Hden_1480	PWY-6148	tetrahydromethanopterin biosynthesis
Hden_1481	PWY-7158	L-phenylalanine degradation V
Hden_1482	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
Hden_1482	PWY-6148	tetrahydromethanopterin biosynthesis
Hden_1482	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
Hden_1482	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
Hden_1484	PWY-6823	molybdenum cofactor biosynthesis
Hden_1486	PWY-6420	pyrroloquinoline quinone biosynthesis
Hden_1490	PWY-6683	sulfate reduction III (assimilatory)
Hden_1491	PWY-6683	sulfate reduction III (assimilatory)
Hden_1501	PWY-4381	fatty acid biosynthesis initiation I
Hden_1501	PWY-5743	3-hydroxypropanoate cycle
Hden_1501	PWY-5744	glyoxylate assimilation
Hden_1501	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Hden_1501	PWY-6679	jadomycin biosynthesis
Hden_1501	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Hden_1519	PWY-5344	L-homocysteine biosynthesis
Hden_1519	PWY-7174	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation II
Hden_1524	PWY-5484	glycolysis II (from fructose 6-phosphate)
Hden_1608	PWY-5209	methyl-coenzyme M oxidation to CO<sub>2</sub>
Hden_1622	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Hden_1622	PWY-5723	Rubisco shunt
Hden_1622	PWY-6891	thiazole biosynthesis II (Bacillus)
Hden_1622	PWY-6892	thiazole biosynthesis I (E. coli)
Hden_1622	PWY-6901	superpathway of glucose and xylose degradation
Hden_1622	PWY-7560	methylerythritol phosphate pathway II
Hden_1623	PWY-1042	glycolysis IV (plant cytosol)
Hden_1623	PWY-5484	glycolysis II (from fructose 6-phosphate)
Hden_1623	PWY-6886	1-butanol autotrophic biosynthesis
Hden_1623	PWY-6901	superpathway of glucose and xylose degradation
Hden_1623	PWY-7003	glycerol degradation to butanol
Hden_1625	PWY-6910	hydroxymethylpyrimidine salvage
Hden_1625	PWY-7356	thiamin salvage IV (yeast)
Hden_1625	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
Hden_1633	PWY-101	photosynthesis light reactions
Hden_1633	PWY-7230	ubiquinol-6 biosynthesis from 4-aminobenzoate (eukaryotic)
Hden_1648	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
Hden_1649	PWY-6749	CMP-legionaminate biosynthesis I
Hden_1682	PWY-7560	methylerythritol phosphate pathway II
Hden_1699	PWY-5988	wound-induced proteolysis I
Hden_1699	PWY-6018	seed germination protein turnover
Hden_1706	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
Hden_1711	PWY-5367	petroselinate biosynthesis
Hden_1711	PWY-5971	palmitate biosynthesis II (bacteria and plants)
Hden_1711	PWY-5973	<i>cis</i>-vaccenate biosynthesis
Hden_1711	PWY-5989	stearate biosynthesis II (bacteria and plants)
Hden_1711	PWY-5994	palmitate biosynthesis I (animals and fungi)
Hden_1711	PWY-6113	superpathway of mycolate biosynthesis
Hden_1711	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
Hden_1711	PWY-6519	8-amino-7-oxononanoate biosynthesis I
Hden_1711	PWY-6951	Hden_1711
Hden_1711	PWY-7053	docosahexaenoate biosynthesis I (lower eukaryotes)
Hden_1711	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Hden_1711	PWYG-321	mycolate biosynthesis
Hden_1712	PWY-4381	fatty acid biosynthesis initiation I
Hden_1712	PWY-6799	fatty acid biosynthesis (plant mitochondria)
Hden_1712	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Hden_1713	PWY-5386	methylglyoxal degradation I
Hden_1721	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
Hden_1724	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Hden_1724	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
Hden_1724	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
Hden_1724	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
Hden_1731	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
Hden_1731	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Hden_1731	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
Hden_1731	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
Hden_1731	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
Hden_1731	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
Hden_1732	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
Hden_1732	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
Hden_1768	PWY-1042	glycolysis IV (plant cytosol)
Hden_1768	PWY-1622	formaldehyde assimilation I (serine pathway)
Hden_1768	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
Hden_1768	PWY-5484	glycolysis II (from fructose 6-phosphate)
Hden_1768	PWY-5723	Rubisco shunt
Hden_1768	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Hden_1768	PWY-6886	1-butanol autotrophic biosynthesis
Hden_1768	PWY-6901	superpathway of glucose and xylose degradation
Hden_1768	PWY-7003	glycerol degradation to butanol
Hden_1768	PWY-7124	ethylene biosynthesis V (engineered)
Hden_1768	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
Hden_1769	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
Hden_1770	PWY-6703	preQ<sub>0</sub> biosynthesis
Hden_1773	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
Hden_1774	PWY-6703	preQ<sub>0</sub> biosynthesis
Hden_1776	PWY-6700	queuosine biosynthesis
Hden_1786	PWY-5663	tetrahydrobiopterin biosynthesis I
Hden_1786	PWY-5664	tetrahydrobiopterin biosynthesis II
Hden_1786	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
Hden_1786	PWY-6703	preQ<sub>0</sub> biosynthesis
Hden_1786	PWY-6983	tetrahydrobiopterin biosynthesis III
Hden_1786	PWY-7442	drosopterin and aurodrosopterin biosynthesis
Hden_1796	PWY-6936	seleno-amino acid biosynthesis
Hden_1796	PWY-7274	D-cycloserine biosynthesis
Hden_1800	PWY-2201	folate transformations I
Hden_1800	PWY-3841	folate transformations II
Hden_1802	PWY-2201	folate transformations I
Hden_1802	PWY-3841	folate transformations II
Hden_1813	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Hden_1813	PWY-5686	UMP biosynthesis
Hden_1813	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Hden_1817	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Hden_1817	PWY-5686	UMP biosynthesis
Hden_1817	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Hden_1839	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Hden_1840	PWY-5381	pyridine nucleotide cycling (plants)
Hden_1840	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
Hden_1843	PWY-6164	3-dehydroquinate biosynthesis I
Hden_1845	PWY-4081	glutathione redox reactions I
Hden_1847	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Hden_1847	PWY-5723	Rubisco shunt
Hden_1848	PWY-181	photorespiration
Hden_1865	PWY-6749	CMP-legionaminate biosynthesis I
Hden_1875	PWY-1723	formaldehyde oxidation V (H<sub>4</sub>MPT pathway)
Hden_1875	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Hden_1882	PWY-6748	nitrate reduction VII (denitrification)
Hden_1882	PWY-7084	nitrifier denitrification
Hden_1892	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
Hden_1892	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
Hden_1903	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Hden_1908	PWY-5971	palmitate biosynthesis II (bacteria and plants)
Hden_1908	PWY-5973	<i>cis</i>-vaccenate biosynthesis
Hden_1908	PWY-5989	stearate biosynthesis II (bacteria and plants)
Hden_1908	PWY-5994	palmitate biosynthesis I (animals and fungi)
Hden_1908	PWY-6113	superpathway of mycolate biosynthesis
Hden_1908	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
Hden_1908	PWY-6519	8-amino-7-oxononanoate biosynthesis I
Hden_1908	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Hden_1908	PWYG-321	mycolate biosynthesis
Hden_1912	PWY-7560	methylerythritol phosphate pathway II
Hden_1926	PWY-5743	3-hydroxypropanoate cycle
Hden_1926	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Hden_1926	PWY-6728	methylaspartate cycle
Hden_1926	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Hden_1928	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
Hden_1928	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
Hden_1930	PWY-3781	aerobic respiration I (cytochrome c)
Hden_1930	PWY-4302	aerobic respiration III (alternative oxidase pathway)
Hden_1930	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
Hden_1930	PWY-6692	Fe(II) oxidation
Hden_1931	PWY-3781	aerobic respiration I (cytochrome c)
Hden_1931	PWY-4302	aerobic respiration III (alternative oxidase pathway)
Hden_1931	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
Hden_1931	PWY-6692	Fe(II) oxidation
Hden_1960	PWY-5350	thiosulfate disproportionation III (rhodanese)
Hden_1970	PWY-5971	palmitate biosynthesis II (bacteria and plants)
Hden_1970	PWY-5973	<i>cis</i>-vaccenate biosynthesis
Hden_1970	PWY-5989	stearate biosynthesis II (bacteria and plants)
Hden_1970	PWY-6113	superpathway of mycolate biosynthesis
Hden_1970	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
Hden_1970	PWY-6519	8-amino-7-oxononanoate biosynthesis I
Hden_1970	PWY-7096	triclosan resistance
Hden_1970	PWYG-321	mycolate biosynthesis
Hden_1972	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Hden_1977	PWY-6891	thiazole biosynthesis II (Bacillus)
Hden_1977	PWY-6892	thiazole biosynthesis I (E. coli)
Hden_1977	PWY-7560	methylerythritol phosphate pathway II
Hden_1993	PWY-5686	UMP biosynthesis
Hden_1998	PWY-5316	nicotine biosynthesis
Hden_1998	PWY-7342	superpathway of nicotine biosynthesis
Hden_1999	PWY-5316	nicotine biosynthesis
Hden_1999	PWY-7342	superpathway of nicotine biosynthesis
Hden_2000	PWY-5316	nicotine biosynthesis
Hden_2000	PWY-5381	pyridine nucleotide cycling (plants)
Hden_2000	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
Hden_2000	PWY-7342	superpathway of nicotine biosynthesis
Hden_2002	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
Hden_2002	PWY-6549	L-glutamine biosynthesis III
Hden_2002	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
Hden_2002	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
Hden_2013	PWY-5269	cardiolipin biosynthesis II
Hden_2013	PWY-5668	cardiolipin biosynthesis I
Hden_2015	PWY-6823	molybdenum cofactor biosynthesis
Hden_2017	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
Hden_2017	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
Hden_2017	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
Hden_2028	PWY-1281	sulfoacetaldehyde degradation I
Hden_2028	PWY-5482	pyruvate fermentation to acetate II
Hden_2028	PWY-5485	pyruvate fermentation to acetate IV
Hden_2028	PWY-5497	purine nucleobases degradation II (anaerobic)
Hden_2028	PWY-6637	sulfolactate degradation II
Hden_2029	PWY-5482	pyruvate fermentation to acetate II
Hden_2029	PWY-5485	pyruvate fermentation to acetate IV
Hden_2029	PWY-5497	purine nucleobases degradation II (anaerobic)
Hden_2030	PWY-5971	palmitate biosynthesis II (bacteria and plants)
Hden_2030	PWY-5973	<i>cis</i>-vaccenate biosynthesis
Hden_2030	PWY-5989	stearate biosynthesis II (bacteria and plants)
Hden_2030	PWY-6113	superpathway of mycolate biosynthesis
Hden_2030	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
Hden_2030	PWY-6519	8-amino-7-oxononanoate biosynthesis I
Hden_2030	PWY-7096	triclosan resistance
Hden_2030	PWYG-321	mycolate biosynthesis
Hden_2049	PWY-3781	aerobic respiration I (cytochrome c)
Hden_2049	PWY-4521	arsenite oxidation I (respiratory)
Hden_2049	PWY-6692	Fe(II) oxidation
Hden_2049	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Hden_2050	PWY-3781	aerobic respiration I (cytochrome c)
Hden_2050	PWY-4521	arsenite oxidation I (respiratory)
Hden_2050	PWY-6692	Fe(II) oxidation
Hden_2050	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Hden_2051	PWY-5971	palmitate biosynthesis II (bacteria and plants)
Hden_2051	PWY-5973	<i>cis</i>-vaccenate biosynthesis
Hden_2051	PWY-5989	stearate biosynthesis II (bacteria and plants)
Hden_2051	PWY-6113	superpathway of mycolate biosynthesis
Hden_2051	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
Hden_2051	PWY-6519	8-amino-7-oxononanoate biosynthesis I
Hden_2051	PWY-7096	triclosan resistance
Hden_2051	PWYG-321	mycolate biosynthesis
Hden_2052	PWY-5482	pyruvate fermentation to acetate II
Hden_2052	PWY-5485	pyruvate fermentation to acetate IV
Hden_2052	PWY-5497	purine nucleobases degradation II (anaerobic)
Hden_2053	PWY-1281	sulfoacetaldehyde degradation I
Hden_2053	PWY-5482	pyruvate fermentation to acetate II
Hden_2053	PWY-5485	pyruvate fermentation to acetate IV
Hden_2053	PWY-5497	purine nucleobases degradation II (anaerobic)
Hden_2053	PWY-6637	sulfolactate degradation II
Hden_2055	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
Hden_2055	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
Hden_2055	PWY-6936	seleno-amino acid biosynthesis
Hden_2055	PWY-702	L-methionine biosynthesis II
Hden_2058	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Hden_2072	PWY-6871	3-methylbutanol biosynthesis
Hden_2076	PWY-5101	L-isoleucine biosynthesis II
Hden_2076	PWY-5103	L-isoleucine biosynthesis III
Hden_2076	PWY-5104	L-isoleucine biosynthesis IV
Hden_2076	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Hden_2077	PWY-5101	L-isoleucine biosynthesis II
Hden_2077	PWY-5103	L-isoleucine biosynthesis III
Hden_2077	PWY-5104	L-isoleucine biosynthesis IV
Hden_2077	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
Hden_2077	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
Hden_2077	PWY-6389	(<i>S</i>)-acetoin biosynthesis
Hden_2077	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Hden_2080	PWY-5101	L-isoleucine biosynthesis II
Hden_2080	PWY-5103	L-isoleucine biosynthesis III
Hden_2080	PWY-5104	L-isoleucine biosynthesis IV
Hden_2080	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
Hden_2080	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
Hden_2080	PWY-6389	(<i>S</i>)-acetoin biosynthesis
Hden_2080	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Hden_2081	PWY-2781	<i>cis</i>-zeatin biosynthesis
Hden_2092	PWY-6123	inosine-5'-phosphate biosynthesis I
Hden_2092	PWY-6124	inosine-5'-phosphate biosynthesis II
Hden_2092	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Hden_2092	PWY-7234	inosine-5'-phosphate biosynthesis III
Hden_2099	PWY-6123	inosine-5'-phosphate biosynthesis I
Hden_2099	PWY-6124	inosine-5'-phosphate biosynthesis II
Hden_2099	PWY-7234	inosine-5'-phosphate biosynthesis III
Hden_2100	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Hden_2100	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
Hden_2100	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
Hden_2102	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Hden_2102	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
Hden_2102	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
Hden_2106	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Hden_2106	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
Hden_2106	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
Hden_2121	PWY-5913	TCA cycle VI (obligate autotrophs)
Hden_2121	PWY-6549	L-glutamine biosynthesis III
Hden_2121	PWY-6728	methylaspartate cycle
Hden_2121	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Hden_2121	PWY-7124	ethylene biosynthesis V (engineered)
Hden_2121	PWY-7254	TCA cycle VII (acetate-producers)
Hden_2121	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
Hden_2126	PWY-1723	formaldehyde oxidation V (H<sub>4</sub>MPT pathway)
Hden_2126	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Hden_2166	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Hden_2166	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Hden_2168	PWY-6700	queuosine biosynthesis
Hden_2169	PWY-6700	queuosine biosynthesis
Hden_2186	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
Hden_2197	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
Hden_2197	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Hden_2197	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
Hden_2197	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
Hden_2219	PWY-6938	NADH repair
Hden_2221	PWY-381	nitrate reduction II (assimilatory)
Hden_2221	PWY-5675	nitrate reduction V (assimilatory)
Hden_2221	PWY-6549	L-glutamine biosynthesis III
Hden_2221	PWY-6963	ammonia assimilation cycle I
Hden_2221	PWY-6964	ammonia assimilation cycle II
Hden_2228	PWY-6825	phosphatidylcholine biosynthesis V
Hden_2234	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
Hden_2234	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
Hden_2243	PWY-6012	acyl carrier protein metabolism I
Hden_2243	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
Hden_2252	PWY-2941	L-lysine biosynthesis II
Hden_2252	PWY-2942	L-lysine biosynthesis III
Hden_2252	PWY-5097	L-lysine biosynthesis VI
Hden_2258	PWY-5194	siroheme biosynthesis
Hden_2258	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
Hden_2296	PWY-5686	UMP biosynthesis
Hden_2298	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
Hden_2298	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
Hden_2305	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
Hden_2316	PWY-2161	folate polyglutamylation
Hden_2317	PWY-4381	fatty acid biosynthesis initiation I
Hden_2317	PWY-5743	3-hydroxypropanoate cycle
Hden_2317	PWY-5744	glyoxylate assimilation
Hden_2317	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Hden_2317	PWY-6679	jadomycin biosynthesis
Hden_2317	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Hden_2328	PWY-7205	CMP phosphorylation
Hden_2329	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Hden_2342	PWY-4202	arsenate detoxification I (glutaredoxin)
Hden_2342	PWY-4621	arsenate detoxification II (glutaredoxin)
Hden_2345	PWY-5737	(5<i>R</i>)-carbapenem carboxylate biosynthesis
Hden_2345	PWY-6853	ethylene biosynthesis II (microbes)
Hden_2345	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
Hden_2354	PWY-6823	molybdenum cofactor biosynthesis
Hden_2354	PWY-6891	thiazole biosynthesis II (Bacillus)
Hden_2354	PWY-6892	thiazole biosynthesis I (E. coli)
Hden_2354	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
Hden_2383	PWY-6890	4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis
Hden_2405	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Hden_2410	PWY-6749	CMP-legionaminate biosynthesis I
Hden_2414	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
Hden_2414	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
Hden_2415	PWY-6614	tetrahydrofolate biosynthesis
Hden_2446	PWY-1042	glycolysis IV (plant cytosol)
Hden_2446	PWY-5484	glycolysis II (from fructose 6-phosphate)
Hden_2446	PWY-6901	superpathway of glucose and xylose degradation
Hden_2446	PWY-7003	glycerol degradation to butanol
Hden_2447	PWY-1042	glycolysis IV (plant cytosol)
Hden_2447	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Hden_2447	PWY-5484	glycolysis II (from fructose 6-phosphate)
Hden_2447	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Hden_2447	PWY-7385	1,3-propanediol biosynthesis (engineered)
Hden_2449	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
Hden_2449	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
Hden_2449	PWY-6897	thiamin salvage II
Hden_2449	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
Hden_2449	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
Hden_2449	PWY-7353	4-methyl-5(&beta;-hydroxyethyl)thiazole salvage (yeast)
Hden_2449	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
Hden_2451	PWY-2301	<i>myo</i>-inositol biosynthesis
Hden_2451	PWY-4702	phytate degradation I
Hden_2451	PWY-6363	D-<i>myo</i>-inositol (1,4,5)-trisphosphate degradation
Hden_2466	PWY-1881	formate oxidation to CO<sub>2</sub>
Hden_2466	PWY-5497	purine nucleobases degradation II (anaerobic)
Hden_2466	PWY-6696	oxalate degradation III
Hden_2496	PWY-5057	L-valine degradation II
Hden_2496	PWY-5076	L-leucine degradation III
Hden_2496	PWY-5078	L-isoleucine degradation II
Hden_2496	PWY-5101	L-isoleucine biosynthesis II
Hden_2496	PWY-5103	L-isoleucine biosynthesis III
Hden_2496	PWY-5104	L-isoleucine biosynthesis IV
Hden_2496	PWY-5108	L-isoleucine biosynthesis V
Hden_2500	PWY-3341	L-proline biosynthesis III
Hden_2500	PWY-4981	L-proline biosynthesis II (from arginine)
Hden_2500	PWY-6344	L-ornithine degradation II (Stickland reaction)
Hden_2518	PWY-5506	methanol oxidation to formaldehyde IV
Hden_2520	PWY-4361	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation
Hden_2520	PWY-7174	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation II
Hden_2523	PWY-6605	adenine and adenosine salvage II
Hden_2523	PWY-6610	adenine and adenosine salvage IV
Hden_2528	PWY-3781	aerobic respiration I (cytochrome c)
Hden_2528	PWY-6692	Fe(II) oxidation
Hden_2528	PWY-7082	ammonia oxidation IV (autotrophic ammonia oxidizers)
Hden_2528	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Hden_2530	PWY-6825	phosphatidylcholine biosynthesis V
Hden_2532	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
Hden_2532	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
Hden_2549	PWY-6854	ethylene biosynthesis III (microbes)
Hden_2554	PWY-5743	3-hydroxypropanoate cycle
Hden_2554	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Hden_2554	PWY-6728	methylaspartate cycle
Hden_2554	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Hden_2560	PWY-5743	3-hydroxypropanoate cycle
Hden_2560	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Hden_2560	PWY-6728	methylaspartate cycle
Hden_2560	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Hden_2577	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
Hden_2577	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
Hden_2577	PWY-6269	adenosylcobalamin salvage from cobinamide II
Hden_2578	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
Hden_2578	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
Hden_2578	PWY-6269	adenosylcobalamin salvage from cobinamide II
Hden_2580	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Hden_2580	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Hden_2581	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Hden_2581	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Hden_2582	PWY-6840	homoglutathione biosynthesis
Hden_2582	PWY-7255	ergothioneine biosynthesis I (bacteria)
Hden_2591	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Hden_2591	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
Hden_2591	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
Hden_2602	PWY-3801	sucrose degradation II (sucrose synthase)
Hden_2602	PWY-5054	sorbitol biosynthesis I
Hden_2602	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
Hden_2602	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
Hden_2602	PWY-5659	GDP-mannose biosynthesis
Hden_2602	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Hden_2602	PWY-621	sucrose degradation III (sucrose invertase)
Hden_2602	PWY-622	starch biosynthesis
Hden_2602	PWY-6531	mannitol cycle
Hden_2602	PWY-6981	chitin biosynthesis
Hden_2602	PWY-7238	sucrose biosynthesis II
Hden_2602	PWY-7347	sucrose biosynthesis III
Hden_2602	PWY-7385	1,3-propanediol biosynthesis (engineered)
Hden_2609	PWY-5523	5,6-dimethylbenzimidazole biosynthesis
Hden_2609	PWY-6167	flavin biosynthesis II (archaea)
Hden_2609	PWY-6168	flavin biosynthesis III (fungi)
Hden_2617	PWY-5506	methanol oxidation to formaldehyde IV
Hden_2624	PWY-6123	inosine-5'-phosphate biosynthesis I
Hden_2624	PWY-7234	inosine-5'-phosphate biosynthesis III
Hden_2633	PWY-3781	aerobic respiration I (cytochrome c)
Hden_2633	PWY-4521	arsenite oxidation I (respiratory)
Hden_2633	PWY-6692	Fe(II) oxidation
Hden_2633	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Hden_2644	PWY-1042	glycolysis IV (plant cytosol)
Hden_2644	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
Hden_2644	PWY-5484	glycolysis II (from fructose 6-phosphate)
Hden_2644	PWY-5723	Rubisco shunt
Hden_2644	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Hden_2644	PWY-6886	1-butanol autotrophic biosynthesis
Hden_2644	PWY-6901	superpathway of glucose and xylose degradation
Hden_2644	PWY-7003	glycerol degradation to butanol
Hden_2644	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
Hden_2644	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
Hden_2657	PWY-3801	sucrose degradation II (sucrose synthase)
Hden_2657	PWY-6527	stachyose degradation
Hden_2657	PWY-6981	chitin biosynthesis
Hden_2657	PWY-7238	sucrose biosynthesis II
Hden_2657	PWY-7343	UDP-glucose biosynthesis
Hden_2662	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
Hden_2662	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
Hden_2662	PWY-6897	thiamin salvage II
Hden_2662	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
Hden_2662	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
Hden_2662	PWY-7353	4-methyl-5(&beta;-hydroxyethyl)thiazole salvage (yeast)
Hden_2662	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
Hden_2663	PWY-6891	thiazole biosynthesis II (Bacillus)
Hden_2663	PWY-6892	thiazole biosynthesis I (E. coli)
Hden_2667	PWY-4041	&gamma;-glutamyl cycle
Hden_2667	PWY-5826	hypoglycin biosynthesis
Hden_2670	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
Hden_2670	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
Hden_2670	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
Hden_2691	PWY-5194	siroheme biosynthesis
Hden_2691	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
Hden_2693	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
Hden_2696	PWY-5194	siroheme biosynthesis
Hden_2696	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
Hden_2698	PWY-6683	sulfate reduction III (assimilatory)
Hden_2701	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
Hden_2701	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
Hden_2701	PWY-6269	adenosylcobalamin salvage from cobinamide II
Hden_2702	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
Hden_2702	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
Hden_2702	PWY-6268	adenosylcobalamin salvage from cobalamin
Hden_2702	PWY-6269	adenosylcobalamin salvage from cobinamide II
Hden_2705	PWY-5194	siroheme biosynthesis
Hden_2705	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
Hden_2705	PWY-5523	5,6-dimethylbenzimidazole biosynthesis
Hden_2705	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
Hden_2715	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Hden_2715	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Hden_2720	PWY-5663	tetrahydrobiopterin biosynthesis I
Hden_2720	PWY-5664	tetrahydrobiopterin biosynthesis II
Hden_2720	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
Hden_2720	PWY-6703	preQ<sub>0</sub> biosynthesis
Hden_2720	PWY-6983	tetrahydrobiopterin biosynthesis III
Hden_2720	PWY-7442	drosopterin and aurodrosopterin biosynthesis
Hden_2731	PWY-7432	L-phenylalanine biosynthesis III (cytosolic, plants)
Hden_2732	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
Hden_2732	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
Hden_2744	PWY-6834	spermidine biosynthesis III
Hden_2750	PWY-5964	guanylyl molybdenum cofactor biosynthesis
Hden_2752	PWY-6823	molybdenum cofactor biosynthesis
Hden_2754	PWY-6599	guanine and guanosine salvage II
Hden_2754	PWY-6609	adenine and adenosine salvage III
Hden_2754	PWY-6610	adenine and adenosine salvage IV
Hden_2754	PWY-6620	guanine and guanosine salvage
Hden_2760	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
Hden_2760	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Hden_2760	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
Hden_2760	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
Hden_2760	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Hden_2760	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Hden_2760	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
Hden_2760	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
Hden_2764	PWY-5344	L-homocysteine biosynthesis
Hden_2767	PWY-5386	methylglyoxal degradation I
Hden_2770	PWY-5676	acetyl-CoA fermentation to butanoate II
Hden_2770	PWY-5741	ethylmalonyl-CoA pathway
Hden_2770	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
Hden_2780	PWY-7560	methylerythritol phosphate pathway II
Hden_2796	PWY-5874	heme degradation
Hden_2796	PWY-5915	phycoerythrobilin biosynthesis I
Hden_2796	PWY-5917	phycocyanobilin biosynthesis
Hden_2796	PWY-7170	phytochromobilin biosynthesis
Hden_2809	PWY-5704	urea degradation II
Hden_2810	PWY-5704	urea degradation II
Hden_2836	PWY-6654	phosphopantothenate biosynthesis III
Hden_2845	PWY-5269	cardiolipin biosynthesis II
Hden_2845	PWY-5668	cardiolipin biosynthesis I
Hden_2847	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Hden_2847	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
Hden_2847	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
Hden_2851	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Hden_2851	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
Hden_2855	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
Hden_2855	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
Hden_2855	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Hden_2855	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
Hden_2855	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
Hden_2855	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
Hden_2855	PWY-7205	CMP phosphorylation
Hden_2855	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
Hden_2855	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Hden_2855	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
Hden_2855	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Hden_2855	PWY-7224	purine deoxyribonucleosides salvage
Hden_2855	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
Hden_2855	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
Hden_2869	PWY-7560	methylerythritol phosphate pathway II
Hden_2891	PWY-7560	methylerythritol phosphate pathway II
Hden_2892	PWY-702	L-methionine biosynthesis II
Hden_2907	PWY-3781	aerobic respiration I (cytochrome c)
Hden_2907	PWY-4521	arsenite oxidation I (respiratory)
Hden_2907	PWY-6692	Fe(II) oxidation
Hden_2907	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Hden_2925	PWY-5958	acridone alkaloid biosynthesis
Hden_2925	PWY-6543	4-aminobenzoate biosynthesis
Hden_2925	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
Hden_2925	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
Hden_2925	PWY-6722	candicidin biosynthesis
Hden_2951	PWY-6683	sulfate reduction III (assimilatory)
Hden_3043	PWY-7376	cob(II)yrinate <i>a,c</i>-diamide biosynthesis II (late cobalt incorporation)
Hden_3045	PWY-6785	hydrogen production VIII
Hden_3051	PWY-5129	sphingolipid biosynthesis (plants)
Hden_3055	PWY-7346	UDP-&alpha;-D-glucuronate biosynthesis (from UDP-glucose)
Hden_3081	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
Hden_3081	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
Hden_3081	PWY-6268	adenosylcobalamin salvage from cobalamin
Hden_3081	PWY-6269	adenosylcobalamin salvage from cobinamide II
Hden_3112	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Hden_3116	PWY-3661	glycine betaine degradation I
Hden_3116	PWY-4722	creatinine degradation II
Hden_3117	PWY-3661	glycine betaine degradation I
Hden_3117	PWY-4722	creatinine degradation II
Hden_3118	PWY-3661	glycine betaine degradation I
Hden_3118	PWY-4722	creatinine degradation II
Hden_3119	PWY-3661	glycine betaine degradation I
Hden_3119	PWY-4722	creatinine degradation II
Hden_3129	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Hden_3129	PWY-5723	Rubisco shunt
Hden_3130	PWY-5723	Rubisco shunt
Hden_3131	PWY-5484	glycolysis II (from fructose 6-phosphate)
Hden_3136	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
Hden_3136	PWY-2161	folate polyglutamylation
Hden_3136	PWY-2201	folate transformations I
Hden_3136	PWY-3841	folate transformations II
Hden_3150	PWY-1622	formaldehyde assimilation I (serine pathway)
Hden_3150	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
Hden_3150	PWY-5913	TCA cycle VI (obligate autotrophs)
Hden_3150	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Hden_3150	PWY-6146	<i>Methanobacterium thermoautotrophicum</i> biosynthetic metabolism
Hden_3150	PWY-6549	L-glutamine biosynthesis III
Hden_3150	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
Hden_3150	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
Hden_3150	PWY-7124	ethylene biosynthesis V (engineered)
Hden_3151	PWY-5392	reductive TCA cycle II
Hden_3151	PWY-5537	pyruvate fermentation to acetate V
Hden_3151	PWY-5538	pyruvate fermentation to acetate VI
Hden_3151	PWY-5690	TCA cycle II (plants and fungi)
Hden_3151	PWY-5913	TCA cycle VI (obligate autotrophs)
Hden_3151	PWY-6728	methylaspartate cycle
Hden_3151	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Hden_3151	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Hden_3152	PWY-5392	reductive TCA cycle II
Hden_3152	PWY-5537	pyruvate fermentation to acetate V
Hden_3152	PWY-5538	pyruvate fermentation to acetate VI
Hden_3152	PWY-5690	TCA cycle II (plants and fungi)
Hden_3152	PWY-5913	TCA cycle VI (obligate autotrophs)
Hden_3152	PWY-6728	methylaspartate cycle
Hden_3152	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Hden_3152	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Hden_3154	PWY-6832	2-aminoethylphosphonate degradation II
Hden_3165	PWY-7376	cob(II)yrinate <i>a,c</i>-diamide biosynthesis II (late cobalt incorporation)
Hden_3166	PWY-7376	cob(II)yrinate <i>a,c</i>-diamide biosynthesis II (late cobalt incorporation)
Hden_3170	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Hden_3170	PWY-6164	3-dehydroquinate biosynthesis I
Hden_3174	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
Hden_3174	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
Hden_3176	PWY-4381	fatty acid biosynthesis initiation I
Hden_3176	PWY-5743	3-hydroxypropanoate cycle
Hden_3176	PWY-5744	glyoxylate assimilation
Hden_3176	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Hden_3176	PWY-6679	jadomycin biosynthesis
Hden_3176	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Hden_3184	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Hden_3186	PWY-6502	oxidized GTP and dGTP detoxification
Hden_3193	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
Hden_3195	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
Hden_3197	PWY-4381	fatty acid biosynthesis initiation I
Hden_3211	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
Hden_3211	PWY-2201	folate transformations I
Hden_3211	PWY-3841	folate transformations II
Hden_3211	PWY-5030	L-histidine degradation III
Hden_3211	PWY-5497	purine nucleobases degradation II (anaerobic)
Hden_3211	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
Hden_3221	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Hden_3221	PWY-5723	Rubisco shunt
Hden_3222	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Hden_3222	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Hden_3225	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
Hden_3225	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
Hden_3226	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
Hden_3227	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
Hden_3228	PWY-5392	reductive TCA cycle II
Hden_3228	PWY-5537	pyruvate fermentation to acetate V
Hden_3228	PWY-5538	pyruvate fermentation to acetate VI
Hden_3228	PWY-5690	TCA cycle II (plants and fungi)
Hden_3228	PWY-5913	TCA cycle VI (obligate autotrophs)
Hden_3228	PWY-6728	methylaspartate cycle
Hden_3228	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Hden_3228	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Hden_3229	PWY-5392	reductive TCA cycle II
Hden_3229	PWY-5537	pyruvate fermentation to acetate V
Hden_3229	PWY-5538	pyruvate fermentation to acetate VI
Hden_3229	PWY-5690	TCA cycle II (plants and fungi)
Hden_3229	PWY-5913	TCA cycle VI (obligate autotrophs)
Hden_3229	PWY-6728	methylaspartate cycle
Hden_3229	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Hden_3229	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Hden_3231	PWY-1622	formaldehyde assimilation I (serine pathway)
Hden_3231	PWY-5392	reductive TCA cycle II
Hden_3231	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
Hden_3231	PWY-5690	TCA cycle II (plants and fungi)
Hden_3231	PWY-5913	TCA cycle VI (obligate autotrophs)
Hden_3231	PWY-6728	methylaspartate cycle
Hden_3231	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Hden_3231	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
Hden_3231	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
Hden_3236	PWY-3781	aerobic respiration I (cytochrome c)
Hden_3236	PWY-4302	aerobic respiration III (alternative oxidase pathway)
Hden_3236	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
Hden_3236	PWY-5690	TCA cycle II (plants and fungi)
Hden_3236	PWY-6728	methylaspartate cycle
Hden_3236	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Hden_3236	PWY-7254	TCA cycle VII (acetate-producers)
Hden_3236	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Hden_3238	PWY-3781	aerobic respiration I (cytochrome c)
Hden_3238	PWY-4302	aerobic respiration III (alternative oxidase pathway)
Hden_3238	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
Hden_3238	PWY-5690	TCA cycle II (plants and fungi)
Hden_3238	PWY-6728	methylaspartate cycle
Hden_3238	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Hden_3238	PWY-7254	TCA cycle VII (acetate-producers)
Hden_3238	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Hden_3241	PWY-5741	ethylmalonyl-CoA pathway
Hden_3241	PWY-5744	glyoxylate assimilation
Hden_3241	PWY-6728	methylaspartate cycle
Hden_3243	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
Hden_3243	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
Hden_3244	PWY-4202	arsenate detoxification I (glutaredoxin)
Hden_3244	PWY-4621	arsenate detoxification II (glutaredoxin)
Hden_3246	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
Hden_3246	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Hden_3246	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
Hden_3246	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
Hden_3272	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Hden_3275	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
Hden_3275	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
Hden_3277	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Hden_3286	PWY-3961	phosphopantothenate biosynthesis II
Hden_3294	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
Hden_3315	PWY-2941	L-lysine biosynthesis II
Hden_3315	PWY-5097	L-lysine biosynthesis VI
Hden_3321	PWY-2941	L-lysine biosynthesis II
Hden_3321	PWY-2942	L-lysine biosynthesis III
Hden_3321	PWY-5097	L-lysine biosynthesis VI
Hden_3321	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Hden_3321	PWY-6559	spermidine biosynthesis II
Hden_3321	PWY-6562	norspermidine biosynthesis
Hden_3321	PWY-7153	grixazone biosynthesis
Hden_3321	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Hden_3323	PWY-7396	butanol and isobutanol biosynthesis (engineered)
Hden_3325	PWY-1622	formaldehyde assimilation I (serine pathway)
Hden_3325	PWY-5484	glycolysis II (from fructose 6-phosphate)
Hden_3326	PWY-2941	L-lysine biosynthesis II
Hden_3326	PWY-2942	L-lysine biosynthesis III
Hden_3326	PWY-5097	L-lysine biosynthesis VI
Hden_3337	PWY-43	putrescine biosynthesis II
Hden_3338	PWY-43	putrescine biosynthesis II
Hden_3340	PWY-4983	L-citrulline-nitric oxide cycle
Hden_3340	PWY-4984	urea cycle
Hden_3340	PWY-5	canavanine biosynthesis
Hden_3340	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Hden_3340	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Hden_3362	PWY-5386	methylglyoxal degradation I
Hden_3368	PWY-6157	autoinducer AI-1 biosynthesis
Hden_3378	PWY-6829	tRNA methylation (yeast)
Hden_3378	PWY-7285	methylwyosine biosynthesis
Hden_3378	PWY-7286	7-(3-amino-3-carboxypropyl)-wyosine biosynthesis
Hden_3381	PWY-5686	UMP biosynthesis
Hden_3390	PWY-7206	pyrimidine deoxyribonucleotides dephosphorylation
Hden_3401	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Hden_3404	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Hden_3412	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
Hden_3412	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
Hden_3412	PWY-6268	adenosylcobalamin salvage from cobalamin
Hden_3412	PWY-6269	adenosylcobalamin salvage from cobinamide II
Hden_3415	PWY-1361	benzoyl-CoA degradation I (aerobic)
Hden_3415	PWY-5109	2-methylbutanoate biosynthesis
Hden_3415	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
Hden_3415	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
Hden_3415	PWY-5177	glutaryl-CoA degradation
Hden_3415	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Hden_3415	PWY-6435	4-hydroxybenzoate biosynthesis V
Hden_3415	PWY-6583	pyruvate fermentation to butanol I
Hden_3415	PWY-6863	pyruvate fermentation to hexanol
Hden_3415	PWY-6883	pyruvate fermentation to butanol II
Hden_3415	PWY-6944	androstenedione degradation
Hden_3415	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
Hden_3415	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
Hden_3415	PWY-7007	methyl ketone biosynthesis
Hden_3415	PWY-7046	4-coumarate degradation (anaerobic)
Hden_3415	PWY-7094	fatty acid salvage
Hden_3415	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
Hden_3415	PWY-735	jasmonic acid biosynthesis
Hden_3415	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
Hden_3419	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Hden_3419	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Hden_3428	PWY-5350	thiosulfate disproportionation III (rhodanese)
Hden_3439	PWY-4381	fatty acid biosynthesis initiation I
Hden_3449	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Hden_3449	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
Hden_3450	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Hden_3450	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
Hden_3452	PWY-5667	CDP-diacylglycerol biosynthesis I
Hden_3452	PWY-5981	CDP-diacylglycerol biosynthesis III
Hden_3455	PWY-6672	<i>cis</i>-genanyl-CoA degradation
Hden_3455	PWY-7118	chitin degradation to ethanol
Hden_3460	PWY-6123	inosine-5'-phosphate biosynthesis I
Hden_3460	PWY-6124	inosine-5'-phosphate biosynthesis II
Hden_3460	PWY-7234	inosine-5'-phosphate biosynthesis III
Hden_3491	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
Hden_3491	PWY-5912	2'-deoxymugineic acid phytosiderophore biosynthesis
Hden_3504	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Hden_3504	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Hden_3505	PWY-5971	palmitate biosynthesis II (bacteria and plants)
Hden_3505	PWY-5973	<i>cis</i>-vaccenate biosynthesis
Hden_3505	PWY-5989	stearate biosynthesis II (bacteria and plants)
Hden_3505	PWY-6113	superpathway of mycolate biosynthesis
Hden_3505	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
Hden_3505	PWY-6519	8-amino-7-oxononanoate biosynthesis I
Hden_3505	PWY-7096	triclosan resistance
Hden_3505	PWYG-321	mycolate biosynthesis
Hden_3507	PWY-5971	palmitate biosynthesis II (bacteria and plants)
Hden_3507	PWY-5973	<i>cis</i>-vaccenate biosynthesis
Hden_3507	PWY-5989	stearate biosynthesis II (bacteria and plants)
Hden_3507	PWY-5994	palmitate biosynthesis I (animals and fungi)
Hden_3507	PWY-6113	superpathway of mycolate biosynthesis
Hden_3507	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
Hden_3507	PWY-6519	8-amino-7-oxononanoate biosynthesis I
Hden_3507	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Hden_3507	PWYG-321	mycolate biosynthesis
Hden_3512	PWY-6936	seleno-amino acid biosynthesis
Hden_3513	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
Hden_3513	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Hden_3513	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
Hden_3513	PWY-7206	pyrimidine deoxyribonucleotides dephosphorylation
Hden_3517	PWY-4261	glycerol degradation I
Hden_3517	PWY-6118	glycerol-3-phosphate shuttle
Hden_3517	PWY-6952	glycerophosphodiester degradation
Hden_3524	PWY-5855	ubiquinol-7 biosynthesis (prokaryotic)
Hden_3524	PWY-5856	ubiquinol-9 biosynthesis (prokaryotic)
Hden_3524	PWY-5857	ubiquinol-10 biosynthesis (prokaryotic)
Hden_3524	PWY-5870	ubiquinol-8 biosynthesis (eukaryotic)
Hden_3524	PWY-5871	ubiquinol-9 biosynthesis (eukaryotic)
Hden_3524	PWY-5872	ubiquinol-10 biosynthesis (eukaryotic)
Hden_3524	PWY-5873	ubiquinol-7 biosynthesis (eukaryotic)
Hden_3524	PWY-6708	ubiquinol-8 biosynthesis (prokaryotic)
Hden_3524	PWY-7230	ubiquinol-6 biosynthesis from 4-aminobenzoate (eukaryotic)
Hden_3524	PWY-7233	ubiquinol-6 bypass biosynthesis (eukaryotic)
Hden_3525	PWY-2941	L-lysine biosynthesis II
Hden_3525	PWY-2942	L-lysine biosynthesis III
Hden_3525	PWY-5097	L-lysine biosynthesis VI
Hden_3525	PWY-6559	spermidine biosynthesis II
Hden_3525	PWY-6562	norspermidine biosynthesis
Hden_3525	PWY-7153	grixazone biosynthesis
Hden_3545	PWY-5839	menaquinol-7 biosynthesis
Hden_3545	PWY-5844	menaquinol-9 biosynthesis
Hden_3545	PWY-5849	menaquinol-6 biosynthesis
Hden_3545	PWY-5890	menaquinol-10 biosynthesis
Hden_3545	PWY-5891	menaquinol-11 biosynthesis
Hden_3545	PWY-5892	menaquinol-12 biosynthesis
Hden_3545	PWY-5895	menaquinol-13 biosynthesis
