Igni_0002 PWY-6386 UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing) Igni_0002 PWY-6387 UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing) Igni_0004 PWY-6689 tRNA splicing Igni_0018 PWY-6164 3-dehydroquinate biosynthesis I Igni_0021 PWY-5381 pyridine nucleotide cycling (plants) Igni_0036 PWY-7187 pyrimidine deoxyribonucleotides de novo biosynthesis II Igni_0036 PWY-7220 adenosine deoxyribonucleotides de novo biosynthesis II Igni_0036 PWY-7222 guanosine deoxyribonucleotides de novo biosynthesis II Igni_0040 PWY-5041 S-adenosyl-L-methionine cycle II Igni_0044 PWY-5686 UMP biosynthesis Igni_0050 PWY-5796 malonate decarboxylase activation Igni_0085 PWY-5392 reductive TCA cycle II Igni_0085 PWY-5537 pyruvate fermentation to acetate V Igni_0085 PWY-5538 pyruvate fermentation to acetate VI Igni_0085 PWY-5690 TCA cycle II (plants and fungi) Igni_0085 PWY-5913 TCA cycle VI (obligate autotrophs) Igni_0085 PWY-6728 methylaspartate cycle Igni_0085 PWY-6969 TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase) Igni_0085 PWY-7384 anaerobic energy metabolism (invertebrates, mitochondrial) Igni_0086 PWY-5392 reductive TCA cycle II Igni_0086 PWY-5537 pyruvate fermentation to acetate V Igni_0086 PWY-5538 pyruvate fermentation to acetate VI Igni_0086 PWY-5690 TCA cycle II (plants and fungi) Igni_0086 PWY-5913 TCA cycle VI (obligate autotrophs) Igni_0086 PWY-6728 methylaspartate cycle Igni_0086 PWY-6969 TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase) Igni_0086 PWY-7384 anaerobic energy metabolism (invertebrates, mitochondrial) Igni_0089 PWY-5194 siroheme biosynthesis Igni_0089 PWY-7377 cob(II)yrinate a,c-diamide biosynthesis I (early cobalt insertion) Igni_0090 PWY-5188 tetrapyrrole biosynthesis I (from glutamate) Igni_0090 PWY-5189 tetrapyrrole biosynthesis II (from glycine) Igni_0104 PWY-6890 4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis Igni_0120 PWY-6689 tRNA splicing Igni_0158 PWY-5041 S-adenosyl-L-methionine cycle II Igni_0158 PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis Igni_0162 PWY-6823 molybdenum cofactor biosynthesis Igni_0165 PWY-6121 5-aminoimidazole ribonucleotide biosynthesis I Igni_0165 PWY-6122 5-aminoimidazole ribonucleotide biosynthesis II Igni_0165 PWY-6277 superpathway of 5-aminoimidazole ribonucleotide biosynthesis Igni_0171 PWY-6749 CMP-legionaminate biosynthesis I Igni_0179 PWY-7206 pyrimidine deoxyribonucleotides dephosphorylation Igni_0199 PWY-2941 L-lysine biosynthesis II Igni_0199 PWY-2942 L-lysine biosynthesis III Igni_0199 PWY-5097 L-lysine biosynthesis VI Igni_0199 PWY-6559 spermidine biosynthesis II Igni_0199 PWY-6562 norspermidine biosynthesis Igni_0199 PWY-7153 grixazone biosynthesis Igni_0215 PWY-6163 chorismate biosynthesis from 3-dehydroquinate Igni_0219 PWY-6893 thiamin diphosphate biosynthesis II (Bacillus) Igni_0219 PWY-6894 thiamin diphosphate biosynthesis I (E. coli) Igni_0219 PWY-6896 thiamin salvage I Igni_0219 PWY-6897 thiamin salvage II Igni_0224 PWY-7187 pyrimidine deoxyribonucleotides de novo biosynthesis II Igni_0229 PWY-6703 preQ0 biosynthesis Igni_0260 PWY-6823 molybdenum cofactor biosynthesis Igni_0269 PWY-5686 UMP biosynthesis Igni_0274 PWY-1042 glycolysis IV (plant cytosol) Igni_0274 PWY-5484 glycolysis II (from fructose 6-phosphate) Igni_0274 PWY-6886 1-butanol autotrophic biosynthesis Igni_0274 PWY-6901 superpathway of glucose and xylose degradation Igni_0274 PWY-7003 glycerol degradation to butanol Igni_0276 PWY-3781 aerobic respiration I (cytochrome c) Igni_0276 PWY-4302 aerobic respiration III (alternative oxidase pathway) Igni_0276 PWY-561 superpathway of glyoxylate cycle and fatty acid degradation Igni_0276 PWY-5690 TCA cycle II (plants and fungi) Igni_0276 PWY-6728 methylaspartate cycle Igni_0276 PWY-6969 TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase) Igni_0276 PWY-7254 TCA cycle VII (acetate-producers) Igni_0276 PWY-7279 aerobic respiration II (cytochrome c) (yeast) Igni_0280 PWY-6163 chorismate biosynthesis from 3-dehydroquinate Igni_0280 PWY-6416 quinate degradation II Igni_0280 PWY-6707 gallate biosynthesis Igni_0307 PWY-7432 L-phenylalanine biosynthesis III (cytosolic, plants) Igni_0319 PWY-6829 tRNA methylation (yeast) Igni_0319 PWY-7285 methylwyosine biosynthesis Igni_0319 PWY-7286 7-(3-amino-3-carboxypropyl)-wyosine biosynthesis Igni_0324 PWY-5188 tetrapyrrole biosynthesis I (from glutamate) Igni_0324 PWY-5189 tetrapyrrole biosynthesis II (from glycine) Igni_0331 PWY-7176 UTP and CTP de novo biosynthesis Igni_0331 PWY-7177 UTP and CTP dephosphorylation II Igni_0331 PWY-7185 UTP and CTP dephosphorylation I Igni_0334 PWY-6123 inosine-5'-phosphate biosynthesis I Igni_0334 PWY-7234 inosine-5'-phosphate biosynthesis III Igni_0341 PWY-1622 formaldehyde assimilation I (serine pathway) Igni_0341 PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type Igni_0341 PWY-5913 TCA cycle VI (obligate autotrophs) Igni_0341 PWY-6142 gluconeogenesis II (Methanobacterium thermoautotrophicum) Igni_0341 PWY-6146 Methanobacterium thermoautotrophicum biosynthetic metabolism Igni_0341 PWY-6549 L-glutamine biosynthesis III Igni_0341 PWY-7115 C4 photosynthetic carbon assimilation cycle, NAD-ME type Igni_0341 PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type Igni_0341 PWY-7124 ethylene biosynthesis V (engineered) Igni_0346 PWY-7219 adenosine ribonucleotides de novo biosynthesis Igni_0348 PWY-5372 carbon tetrachloride degradation II Igni_0348 PWY-6780 hydrogen production VI Igni_0376 PWY-4381 fatty acid biosynthesis initiation I Igni_0386 PWY-5392 reductive TCA cycle II Igni_0386 PWY-5537 pyruvate fermentation to acetate V Igni_0386 PWY-5538 pyruvate fermentation to acetate VI Igni_0386 PWY-5690 TCA cycle II (plants and fungi) Igni_0386 PWY-5913 TCA cycle VI (obligate autotrophs) Igni_0386 PWY-6728 methylaspartate cycle Igni_0386 PWY-6969 TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase) Igni_0386 PWY-7384 anaerobic energy metabolism (invertebrates, mitochondrial) Igni_0392 PWY-6654 phosphopantothenate biosynthesis III Igni_0400 PWY-6123 inosine-5'-phosphate biosynthesis I Igni_0400 PWY-6124 inosine-5'-phosphate biosynthesis II Igni_0400 PWY-7219 adenosine ribonucleotides de novo biosynthesis Igni_0400 PWY-7234 inosine-5'-phosphate biosynthesis III Igni_0415 PWY-3801 sucrose degradation II (sucrose synthase) Igni_0415 PWY-5054 sorbitol biosynthesis I Igni_0415 PWY-5384 sucrose degradation IV (sucrose phosphorylase) Igni_0415 PWY-5514 UDP-N-acetyl-D-galactosamine biosynthesis II Igni_0415 PWY-5659 GDP-mannose biosynthesis Igni_0415 PWY-6142 gluconeogenesis II (Methanobacterium thermoautotrophicum) Igni_0415 PWY-621 sucrose degradation III (sucrose invertase) Igni_0415 PWY-622 starch biosynthesis Igni_0415 PWY-6531 mannitol cycle Igni_0415 PWY-6981 chitin biosynthesis Igni_0415 PWY-7238 sucrose biosynthesis II Igni_0415 PWY-7347 sucrose biosynthesis III Igni_0415 PWY-7385 1,3-propanediol biosynthesis (engineered) Igni_0416 PWY-6349 CDP-archaeol biosynthesis Igni_0421 PWY-6167 flavin biosynthesis II (archaea) Igni_0421 PWY-6168 flavin biosynthesis III (fungi) Igni_0424 PWY-6893 thiamin diphosphate biosynthesis II (Bacillus) Igni_0424 PWY-6894 thiamin diphosphate biosynthesis I (E. coli) Igni_0424 PWY-6896 thiamin salvage I Igni_0424 PWY-6897 thiamin salvage II Igni_0425 PWY-6349 CDP-archaeol biosynthesis Igni_0428 PWY-1861 formaldehyde assimilation II (RuMP Cycle) Igni_0428 PWY-5723 Rubisco shunt Igni_0442 PWY-7234 inosine-5'-phosphate biosynthesis III Igni_0445 PWY-3781 aerobic respiration I (cytochrome c) Igni_0445 PWY-4302 aerobic respiration III (alternative oxidase pathway) Igni_0445 PWY-561 superpathway of glyoxylate cycle and fatty acid degradation Igni_0445 PWY-5690 TCA cycle II (plants and fungi) Igni_0445 PWY-6728 methylaspartate cycle Igni_0445 PWY-6969 TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase) Igni_0445 PWY-7254 TCA cycle VII (acetate-producers) Igni_0445 PWY-7279 aerobic respiration II (cytochrome c) (yeast) Igni_0465 PWY-5188 tetrapyrrole biosynthesis I (from glutamate) Igni_0466 PWY-5958 acridone alkaloid biosynthesis Igni_0466 PWY-6660 2-heptyl-3-hydroxy-4(1H)-quinolone biosynthesis Igni_0466 PWY-6661 4-hydroxy-2(1H)-quinolone biosynthesis Igni_0476 PWY-6174 mevalonate pathway II (archaea) Igni_0476 PWY-7391 isoprene biosynthesis II (engineered) Igni_0476 PWY-7524 mevalonate pathway III (archaea) Igni_0476 PWY-922 mevalonate pathway I Igni_0478 PWY-6700 queuosine biosynthesis Igni_0483 PWY-5194 siroheme biosynthesis Igni_0483 PWY-7377 cob(II)yrinate a,c-diamide biosynthesis I (early cobalt insertion) Igni_0495 PWY-5686 UMP biosynthesis Igni_0496 PWY-2201 folate transformations I Igni_0496 PWY-3841 folate transformations II Igni_0512 PWY-5188 tetrapyrrole biosynthesis I (from glutamate) Igni_0519 PWY-4361 S-methyl-5-thio-α-D-ribose 1-phosphate degradation Igni_0519 PWY-7174 S-methyl-5-thio-α-D-ribose 1-phosphate degradation II Igni_0531 PWY-6163 chorismate biosynthesis from 3-dehydroquinate Igni_0536 PWY-5083 NAD/NADH phosphorylation and dephosphorylation Igni_0536 PWY-7268 NAD/NADP-NADH/NADPH cytosolic interconversion (yeast) Igni_0536 PWY-7269 NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast) Igni_0537 PWY-7377 cob(II)yrinate a,c-diamide biosynthesis I (early cobalt insertion) Igni_0540 PWY-6163 chorismate biosynthesis from 3-dehydroquinate Igni_0547 PWY-6167 flavin biosynthesis II (archaea) Igni_0560 PWY-5532 adenosine nucleotides degradation IV Igni_0566 PWY-6174 mevalonate pathway II (archaea) Igni_0566 PWY-7524 mevalonate pathway III (archaea) Igni_0585 PWY-6545 pyrimidine deoxyribonucleotides de novo biosynthesis III Igni_0585 PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I Igni_0585 PWY-7187 pyrimidine deoxyribonucleotides de novo biosynthesis II Igni_0585 PWY-7206 pyrimidine deoxyribonucleotides dephosphorylation Igni_0596 PWY-5686 UMP biosynthesis Igni_0608 PWY-5101 L-isoleucine biosynthesis II Igni_0608 PWY-5103 L-isoleucine biosynthesis III Igni_0608 PWY-5104 L-isoleucine biosynthesis IV Igni_0608 PWY-7111 pyruvate fermentation to isobutanol (engineered) Igni_0611 PWY-6834 spermidine biosynthesis III Igni_0617 PWY-101 photosynthesis light reactions Igni_0617 PWY-7230 ubiquinol-6 biosynthesis from 4-aminobenzoate (eukaryotic) Igni_0621 PWY-5154 L-arginine biosynthesis III (via N-acetyl-L-citrulline) Igni_0621 PWY-7400 L-arginine biosynthesis IV (archaebacteria) Igni_0623 PWY-7335 UDP-N-acetyl-α-D-mannosaminouronate biosynthesis Igni_0632 PWY-5663 tetrahydrobiopterin biosynthesis I Igni_0632 PWY-5664 tetrahydrobiopterin biosynthesis II Igni_0632 PWY-6147 6-hydroxymethyl-dihydropterin diphosphate biosynthesis I Igni_0632 PWY-6703 preQ0 biosynthesis Igni_0632 PWY-6983 tetrahydrobiopterin biosynthesis III Igni_0632 PWY-7442 drosopterin and aurodrosopterin biosynthesis Igni_0635 PWY-4983 L-citrulline-nitric oxide cycle Igni_0635 PWY-4984 urea cycle Igni_0635 PWY-5 canavanine biosynthesis Igni_0635 PWY-5154 L-arginine biosynthesis III (via N-acetyl-L-citrulline) Igni_0635 PWY-7400 L-arginine biosynthesis IV (archaebacteria) Igni_0637 PWY-7221 guanosine ribonucleotides de novo biosynthesis Igni_0641 PWY-5316 nicotine biosynthesis Igni_0641 PWY-7342 superpathway of nicotine biosynthesis Igni_0645 PWY-5101 L-isoleucine biosynthesis II Igni_0645 PWY-6871 3-methylbutanol biosynthesis Igni_0657 PWY-6482 diphthamide biosynthesis (archaea) Igni_0659 PWY-3341 L-proline biosynthesis III Igni_0659 PWY-4981 L-proline biosynthesis II (from arginine) Igni_0659 PWY-6344 L-ornithine degradation II (Stickland reaction) Igni_0679 PWY-7219 adenosine ribonucleotides de novo biosynthesis Igni_0683 PWY-5188 tetrapyrrole biosynthesis I (from glutamate) Igni_0684 PWY-5188 tetrapyrrole biosynthesis I (from glutamate) Igni_0684 PWY-5189 tetrapyrrole biosynthesis II (from glycine) Igni_0686 PWY-40 putrescine biosynthesis I Igni_0686 PWY-43 putrescine biosynthesis II Igni_0686 PWY-6305 putrescine biosynthesis IV Igni_0686 PWY-6834 spermidine biosynthesis III Igni_0689 PWY-6167 flavin biosynthesis II (archaea) Igni_0696 PWY-1042 glycolysis IV (plant cytosol) Igni_0696 PWY-5484 glycolysis II (from fructose 6-phosphate) Igni_0696 PWY-6142 gluconeogenesis II (Methanobacterium thermoautotrophicum) Igni_0696 PWY-7003 glycerol degradation to butanol Igni_0698 PWY-6823 molybdenum cofactor biosynthesis Igni_0721 PWY-6829 tRNA methylation (yeast) Igni_0721 PWY-7285 methylwyosine biosynthesis Igni_0721 PWY-7286 7-(3-amino-3-carboxypropyl)-wyosine biosynthesis Igni_0725 PWY-6545 pyrimidine deoxyribonucleotides de novo biosynthesis III Igni_0725 PWY-7176 UTP and CTP de novo biosynthesis Igni_0725 PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I Igni_0725 PWY-7187 pyrimidine deoxyribonucleotides de novo biosynthesis II Igni_0725 PWY-7197 pyrimidine deoxyribonucleotide phosphorylation Igni_0725 PWY-7198 pyrimidine deoxyribonucleotides de novo biosynthesis IV Igni_0725 PWY-7205 CMP phosphorylation Igni_0725 PWY-7210 pyrimidine deoxyribonucleotides biosynthesis from CTP Igni_0725 PWY-7220 adenosine deoxyribonucleotides de novo biosynthesis II Igni_0725 PWY-7221 guanosine ribonucleotides de novo biosynthesis Igni_0725 PWY-7222 guanosine deoxyribonucleotides de novo biosynthesis II Igni_0725 PWY-7224 purine deoxyribonucleosides salvage Igni_0725 PWY-7226 guanosine deoxyribonucleotides de novo biosynthesis I Igni_0725 PWY-7227 adenosine deoxyribonucleotides de novo biosynthesis Igni_0728 PWY-5154 L-arginine biosynthesis III (via N-acetyl-L-citrulline) Igni_0728 PWY-7400 L-arginine biosynthesis IV (archaebacteria) Igni_0738 PWY-5988 wound-induced proteolysis I Igni_0738 PWY-6018 seed germination protein turnover Igni_0747 PWY-5041 S-adenosyl-L-methionine cycle II Igni_0747 PWY-6151 S-adenosyl-L-methionine cycle I Igni_0747 PWY-6936 seleno-amino acid biosynthesis Igni_0747 PWY-702 L-methionine biosynthesis II Igni_0748 PWY-5041 S-adenosyl-L-methionine cycle II Igni_0748 PWY-6151 S-adenosyl-L-methionine cycle I Igni_0748 PWY-6936 seleno-amino acid biosynthesis Igni_0748 PWY-702 L-methionine biosynthesis II Igni_0752 PWY-2941 L-lysine biosynthesis II Igni_0752 PWY-2942 L-lysine biosynthesis III Igni_0752 PWY-5097 L-lysine biosynthesis VI Igni_0752 PWY-5154 L-arginine biosynthesis III (via N-acetyl-L-citrulline) Igni_0752 PWY-6559 spermidine biosynthesis II Igni_0752 PWY-6562 norspermidine biosynthesis Igni_0752 PWY-7153 grixazone biosynthesis Igni_0752 PWY-7400 L-arginine biosynthesis IV (archaebacteria) Igni_0756 PWY-6163 chorismate biosynthesis from 3-dehydroquinate Igni_0756 PWY-7205 CMP phosphorylation Igni_0758 PWY-3821 galactose degradation III Igni_0758 PWY-6174 mevalonate pathway II (archaea) Igni_0758 PWY-6317 galactose degradation I (Leloir pathway) Igni_0758 PWY-6527 stachyose degradation Igni_0758 PWY-7391 isoprene biosynthesis II (engineered) Igni_0758 PWY-922 mevalonate pathway I Igni_0775 PWY-5265 peptidoglycan biosynthesis II (staphylococci) Igni_0775 PWY-6470 peptidoglycan biosynthesis V (β-lactam resistance) Igni_0775 PWY-6471 peptidoglycan biosynthesis IV (Enterococcus faecium) Igni_0787 PWY-6482 diphthamide biosynthesis (archaea) Igni_0787 PWY-7546 diphthamide biosynthesis (eukaryotes) Igni_0804 PWY-5123 trans, trans-farnesyl diphosphate biosynthesis Igni_0804 PWY-6174 mevalonate pathway II (archaea) Igni_0804 PWY-6383 mono-trans, poly-cis decaprenyl phosphate biosynthesis Igni_0804 PWY-6859 all-trans-farnesol biosynthesis Igni_0804 PWY-7102 bisabolene biosynthesis Igni_0804 PWY-7391 isoprene biosynthesis II (engineered) Igni_0804 PWY-7524 mevalonate pathway III (archaea) Igni_0804 PWY-7560 methylerythritol phosphate pathway II Igni_0804 PWY-922 mevalonate pathway I Igni_0817 PWY-6700 queuosine biosynthesis Igni_0832 PWY-6167 flavin biosynthesis II (archaea) Igni_0843 PWY-6123 inosine-5'-phosphate biosynthesis I Igni_0843 PWY-6124 inosine-5'-phosphate biosynthesis II Igni_0843 PWY-7234 inosine-5'-phosphate biosynthesis III Igni_0844 PWY-6121 5-aminoimidazole ribonucleotide biosynthesis I Igni_0844 PWY-6122 5-aminoimidazole ribonucleotide biosynthesis II Igni_0844 PWY-6277 superpathway of 5-aminoimidazole ribonucleotide biosynthesis Igni_0845 PWY-6121 5-aminoimidazole ribonucleotide biosynthesis I Igni_0845 PWY-6122 5-aminoimidazole ribonucleotide biosynthesis II Igni_0845 PWY-6277 superpathway of 5-aminoimidazole ribonucleotide biosynthesis Igni_0867 PWY-6703 preQ0 biosynthesis Igni_0868 PWY-5198 factor 420 biosynthesis Igni_0871 PWY-2301 myo-inositol biosynthesis Igni_0871 PWY-4661 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) Igni_0871 PWY-6372 1D-myo-inositol hexakisphosphate biosynthesis IV (Dictyostelium) Igni_0871 PWY-6580 phosphatidylinositol biosynthesis I (bacteria) Igni_0871 PWY-6664 di-myo-inositol phosphate biosynthesis Igni_0873 PWY-5514 UDP-N-acetyl-D-galactosamine biosynthesis II Igni_0885 PWY-6749 CMP-legionaminate biosynthesis I Igni_0888 PWY-6893 thiamin diphosphate biosynthesis II (Bacillus) Igni_0888 PWY-6894 thiamin diphosphate biosynthesis I (E. coli) Igni_0888 PWY-6897 thiamin salvage II Igni_0888 PWY-6907 thiamin diphosphate biosynthesis III (Staphylococcus) Igni_0888 PWY-6908 thiamin diphosphate biosynthesis IV (eukaryotes) Igni_0888 PWY-7353 4-methyl-5(β-hydroxyethyl)thiazole salvage (yeast) Igni_0888 PWY-7357 thiamin formation from pyrithiamine and oxythiamine (yeast) Igni_0892 PWY-3461 L-tyrosine biosynthesis II Igni_0892 PWY-3462 L-phenylalanine biosynthesis II Igni_0892 PWY-6120 L-tyrosine biosynthesis III Igni_0892 PWY-6627 salinosporamide A biosynthesis Igni_0892 PWY-7303 3-dimethylallyl-4-hydroxybenzoate biosynthesis Igni_0902 PWY-6121 5-aminoimidazole ribonucleotide biosynthesis I Igni_0902 PWY-6122 5-aminoimidazole ribonucleotide biosynthesis II Igni_0902 PWY-6277 superpathway of 5-aminoimidazole ribonucleotide biosynthesis Igni_0902 PWY-7282 4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast) Igni_0910 PWY-6167 flavin biosynthesis II (archaea) Igni_0916 PWY-5921 glutaminyl-tRNAgln biosynthesis via transamidation Igni_0925 PWY-5958 acridone alkaloid biosynthesis Igni_0925 PWY-6660 2-heptyl-3-hydroxy-4(1H)-quinolone biosynthesis Igni_0925 PWY-6661 4-hydroxy-2(1H)-quinolone biosynthesis Igni_0936 PWY-6167 flavin biosynthesis II (archaea) Igni_0936 PWY-6168 flavin biosynthesis III (fungi) Igni_0941 PWY-6829 tRNA methylation (yeast) Igni_0941 PWY-7285 methylwyosine biosynthesis Igni_0941 PWY-7286 7-(3-amino-3-carboxypropyl)-wyosine biosynthesis Igni_0943 PWY-7234 inosine-5'-phosphate biosynthesis III Igni_0946 PWY-6832 2-aminoethylphosphonate degradation II Igni_0957 PWY-6163 chorismate biosynthesis from 3-dehydroquinate Igni_0961 PWY-5101 L-isoleucine biosynthesis II Igni_0961 PWY-5103 L-isoleucine biosynthesis III Igni_0961 PWY-5104 L-isoleucine biosynthesis IV Igni_0961 PWY-7111 pyruvate fermentation to isobutanol (engineered) Igni_0968 PWY-5340 sulfate activation for sulfonation Igni_0970 PWY-5278 sulfite oxidation III Igni_0970 PWY-5340 sulfate activation for sulfonation Igni_0970 PWY-6683 sulfate reduction III (assimilatory) Igni_0970 PWY-6932 selenate reduction Igni_0983 PWY-6871 3-methylbutanol biosynthesis Igni_0990 PWY-6281 L-selenocysteine biosynthesis II (archaea and eukaryotes) Igni_1000 PWY-7286 7-(3-amino-3-carboxypropyl)-wyosine biosynthesis Igni_1007 PWY-1042 glycolysis IV (plant cytosol) Igni_1007 PWY-1622 formaldehyde assimilation I (serine pathway) Igni_1007 PWY-2221 Entner-Doudoroff pathway III (semi-phosphorylative) Igni_1007 PWY-5484 glycolysis II (from fructose 6-phosphate) Igni_1007 PWY-5723 Rubisco shunt Igni_1007 PWY-6142 gluconeogenesis II (Methanobacterium thermoautotrophicum) Igni_1007 PWY-6886 1-butanol autotrophic biosynthesis Igni_1007 PWY-6901 superpathway of glucose and xylose degradation Igni_1007 PWY-7003 glycerol degradation to butanol Igni_1007 PWY-7124 ethylene biosynthesis V (engineered) Igni_1007 PWY-7218 photosynthetic 3-hydroxybutanoate biosynthesis (engineered) Igni_1040 PWY-6167 flavin biosynthesis II (archaea) Igni_1040 PWY-6168 flavin biosynthesis III (fungi) Igni_1050 PWY-7286 7-(3-amino-3-carboxypropyl)-wyosine biosynthesis Igni_1056 PWY-6938 NADH repair Igni_1058 PWY-1361 benzoyl-CoA degradation I (aerobic) Igni_1058 PWY-5109 2-methylbutanoate biosynthesis Igni_1058 PWY-5136 fatty acid β-oxidation II (peroxisome) Igni_1058 PWY-5138 unsaturated, even numbered fatty acid β-oxidation Igni_1058 PWY-5177 glutaryl-CoA degradation Igni_1058 PWY-5789 3-hydroxypropanoate/4-hydroxybutanate cycle Igni_1058 PWY-6435 4-hydroxybenzoate biosynthesis V Igni_1058 PWY-6583 pyruvate fermentation to butanol I Igni_1058 PWY-6863 pyruvate fermentation to hexanol Igni_1058 PWY-6883 pyruvate fermentation to butanol II Igni_1058 PWY-6944 androstenedione degradation Igni_1058 PWY-6945 cholesterol degradation to androstenedione I (cholesterol oxidase) Igni_1058 PWY-6946 cholesterol degradation to androstenedione II (cholesterol dehydrogenase) Igni_1058 PWY-7007 methyl ketone biosynthesis Igni_1058 PWY-7046 4-coumarate degradation (anaerobic) Igni_1058 PWY-7094 fatty acid salvage Igni_1058 PWY-7216 (R)- and (S)-3-hydroxybutanoate biosynthesis Igni_1058 PWY-735 jasmonic acid biosynthesis Igni_1058 PWY-7401 crotonate fermentation (to acetate and cyclohexane carboxylate) Igni_1064 PWY-5913 TCA cycle VI (obligate autotrophs) Igni_1064 PWY-6549 L-glutamine biosynthesis III Igni_1064 PWY-6728 methylaspartate cycle Igni_1064 PWY-6969 TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase) Igni_1064 PWY-7124 ethylene biosynthesis V (engineered) Igni_1064 PWY-7254 TCA cycle VII (acetate-producers) Igni_1064 PWY-7268 NAD/NADP-NADH/NADPH cytosolic interconversion (yeast) Igni_1066 PWY-6545 pyrimidine deoxyribonucleotides de novo biosynthesis III Igni_1066 PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I Igni_1066 PWY-7185 UTP and CTP dephosphorylation I Igni_1066 PWY-7198 pyrimidine deoxyribonucleotides de novo biosynthesis IV Igni_1066 PWY-7210 pyrimidine deoxyribonucleotides biosynthesis from CTP Igni_1079 PWY-7180 2'-deoxy-α-D-ribose 1-phosphate degradation Igni_1086 PWY-5198 factor 420 biosynthesis Igni_1091 PWY-1622 formaldehyde assimilation I (serine pathway) Igni_1091 PWY-181 photorespiration Igni_1091 PWY-2161 folate polyglutamylation Igni_1091 PWY-2201 folate transformations I Igni_1091 PWY-3661 glycine betaine degradation I Igni_1091 PWY-3661-1 glycine betaine degradation II (mammalian) Igni_1091 PWY-3841 folate transformations II Igni_1091 PWY-5497 purine nucleobases degradation II (anaerobic) Igni_1097 PWY-5101 L-isoleucine biosynthesis II Igni_1097 PWY-5103 L-isoleucine biosynthesis III Igni_1097 PWY-5104 L-isoleucine biosynthesis IV Igni_1097 PWY-5938 (R)-acetoin biosynthesis I Igni_1097 PWY-5939 (R)-acetoin biosynthesis II Igni_1097 PWY-6389 (S)-acetoin biosynthesis Igni_1097 PWY-7111 pyruvate fermentation to isobutanol (engineered) Igni_1110 PWY-5188 tetrapyrrole biosynthesis I (from glutamate) Igni_1113 PWY-5484 glycolysis II (from fructose 6-phosphate) Igni_1130 PWY-5674 nitrate reduction IV (dissimilatory) Igni_1131 PWY-6829 tRNA methylation (yeast) Igni_1162 PWY-6711 archaeosine biosynthesis Igni_1174 PWY-6349 CDP-archaeol biosynthesis Igni_1184 PWY-6829 tRNA methylation (yeast) Igni_1189 PWY-5791 1,4-dihydroxy-2-naphthoate biosynthesis II (plants) Igni_1189 PWY-5837 1,4-dihydroxy-2-naphthoate biosynthesis I Igni_1207 PWY-5901 2,3-dihydroxybenzoate biosynthesis Igni_1208 PWY-702 L-methionine biosynthesis II Igni_1228 PWY-381 nitrate reduction II (assimilatory) Igni_1228 PWY-5675 nitrate reduction V (assimilatory) Igni_1228 PWY-6549 L-glutamine biosynthesis III Igni_1228 PWY-6963 ammonia assimilation cycle I Igni_1228 PWY-6964 ammonia assimilation cycle II Igni_1249 PWY-3081 L-lysine biosynthesis V Igni_1249 PWY-6871 3-methylbutanol biosynthesis Igni_1252 PWY-6121 5-aminoimidazole ribonucleotide biosynthesis I Igni_1252 PWY-6122 5-aminoimidazole ribonucleotide biosynthesis II Igni_1252 PWY-6277 superpathway of 5-aminoimidazole ribonucleotide biosynthesis Igni_1267 PWY-6891 thiazole biosynthesis II (Bacillus) Igni_1267 PWY-6892 thiazole biosynthesis I (E. coli) Igni_1267 PWY-7560 methylerythritol phosphate pathway II Igni_1284 PWY-181 photorespiration Igni_1288 PWY-6163 chorismate biosynthesis from 3-dehydroquinate Igni_1305 PWY-7219 adenosine ribonucleotides de novo biosynthesis Igni_1334 PWY-6167 flavin biosynthesis II (archaea) Igni_1334 PWY-6168 flavin biosynthesis III (fungi) Igni_1345 PWY-7221 guanosine ribonucleotides de novo biosynthesis Igni_1350 PWY-5316 nicotine biosynthesis Igni_1350 PWY-5381 pyridine nucleotide cycling (plants) Igni_1350 PWY-5653 NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde Igni_1350 PWY-7342 superpathway of nicotine biosynthesis Igni_1352 PWY-6167 flavin biosynthesis II (archaea) Igni_1358 PWY-5686 UMP biosynthesis Igni_1374 PWY-1042 glycolysis IV (plant cytosol) Igni_1374 PWY-2221 Entner-Doudoroff pathway III (semi-phosphorylative) Igni_1374 PWY-5484 glycolysis II (from fructose 6-phosphate) Igni_1374 PWY-5723 Rubisco shunt Igni_1374 PWY-6142 gluconeogenesis II (Methanobacterium thermoautotrophicum) Igni_1374 PWY-6886 1-butanol autotrophic biosynthesis Igni_1374 PWY-6901 superpathway of glucose and xylose degradation Igni_1374 PWY-7003 glycerol degradation to butanol Igni_1374 PWY-7124 ethylene biosynthesis V (engineered) Igni_1374 PWY-7218 photosynthetic 3-hydroxybutanoate biosynthesis (engineered) Igni_1387 PWY-4981 L-proline biosynthesis II (from arginine) Igni_1387 PWY-4984 urea cycle Igni_1387 PWY-7400 L-arginine biosynthesis IV (archaebacteria) Igni_1390 PWY-6823 molybdenum cofactor biosynthesis Igni_1399 PWY-5154 L-arginine biosynthesis III (via N-acetyl-L-citrulline) Igni_1399 PWY-5686 UMP biosynthesis Igni_1399 PWY-7400 L-arginine biosynthesis IV (archaebacteria) Igni_1400 PWY-5154 L-arginine biosynthesis III (via N-acetyl-L-citrulline) Igni_1400 PWY-5686 UMP biosynthesis Igni_1400 PWY-7400 L-arginine biosynthesis IV (archaebacteria) Igni_1422 PWY-6545 pyrimidine deoxyribonucleotides de novo biosynthesis III Igni_1430 PWY-4983 L-citrulline-nitric oxide cycle Igni_1430 PWY-4984 urea cycle Igni_1430 PWY-5 canavanine biosynthesis Igni_1430 PWY-5154 L-arginine biosynthesis III (via N-acetyl-L-citrulline) Igni_1430 PWY-7400 L-arginine biosynthesis IV (archaebacteria) Igni_1433 PWY-7285 methylwyosine biosynthesis Igni_1433 PWY-7286 7-(3-amino-3-carboxypropyl)-wyosine biosynthesis Igni_1436 PWY-1269 CMP-3-deoxy-D-manno-octulosonate biosynthesis I Igni_1436 PWY-5111 CMP-3-deoxy-D-manno-octulosonate biosynthesis II (from D-arabinose 5-phosphate) Igni_1436 PWY-6164 3-dehydroquinate biosynthesis I Igni_1441 PWY-6148 tetrahydromethanopterin biosynthesis