Isop_0006	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Isop_0006	PWY-5686	UMP biosynthesis
Isop_0006	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Isop_0011	PWY-6749	CMP-legionaminate biosynthesis I
Isop_0013	PWY-5381	pyridine nucleotide cycling (plants)
Isop_0013	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
Isop_0013	PWY-6596	adenosine nucleotides degradation I
Isop_0013	PWY-6606	guanosine nucleotides degradation II
Isop_0013	PWY-6607	guanosine nucleotides degradation I
Isop_0013	PWY-6608	guanosine nucleotides degradation III
Isop_0013	PWY-7185	UTP and CTP dephosphorylation I
Isop_0039	PWY-2941	L-lysine biosynthesis II
Isop_0039	PWY-5097	L-lysine biosynthesis VI
Isop_0044	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
Isop_0045	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
Isop_0046	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
Isop_0046	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
Isop_0060	PWY-7346	UDP-&alpha;-D-glucuronate biosynthesis (from UDP-glucose)
Isop_0061	PWY-381	nitrate reduction II (assimilatory)
Isop_0061	PWY-5675	nitrate reduction V (assimilatory)
Isop_0061	PWY-6549	L-glutamine biosynthesis III
Isop_0061	PWY-6963	ammonia assimilation cycle I
Isop_0061	PWY-6964	ammonia assimilation cycle II
Isop_0085	PWY-6749	CMP-legionaminate biosynthesis I
Isop_0092	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
Isop_0092	PWY-2201	folate transformations I
Isop_0092	PWY-3841	folate transformations II
Isop_0092	PWY-5030	L-histidine degradation III
Isop_0092	PWY-5497	purine nucleobases degradation II (anaerobic)
Isop_0092	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
Isop_0095	PWY-5101	L-isoleucine biosynthesis II
Isop_0095	PWY-6871	3-methylbutanol biosynthesis
Isop_0101	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
Isop_0101	PWY-5912	2'-deoxymugineic acid phytosiderophore biosynthesis
Isop_0121	PWY-6840	homoglutathione biosynthesis
Isop_0121	PWY-7255	ergothioneine biosynthesis I (bacteria)
Isop_0123	PWY-5737	(5<i>R</i>)-carbapenem carboxylate biosynthesis
Isop_0123	PWY-6853	ethylene biosynthesis II (microbes)
Isop_0123	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
Isop_0129	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Isop_0132	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
Isop_0132	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
Isop_0149	PWY-2941	L-lysine biosynthesis II
Isop_0149	PWY-2942	L-lysine biosynthesis III
Isop_0149	PWY-5097	L-lysine biosynthesis VI
Isop_0149	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Isop_0149	PWY-6559	spermidine biosynthesis II
Isop_0149	PWY-6562	norspermidine biosynthesis
Isop_0149	PWY-7153	grixazone biosynthesis
Isop_0149	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Isop_0151	PWY-5796	malonate decarboxylase activation
Isop_0197	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Isop_0197	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
Isop_0209	PWY-6832	2-aminoethylphosphonate degradation II
Isop_0231	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
Isop_0231	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
Isop_0231	PWY-6268	adenosylcobalamin salvage from cobalamin
Isop_0231	PWY-6269	adenosylcobalamin salvage from cobinamide II
Isop_0241	PWY-6784	cellulose and hemicellulose degradation (cellulolosome)
Isop_0264	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
Isop_0275	PWY-4202	arsenate detoxification I (glutaredoxin)
Isop_0275	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
Isop_0275	PWY-6608	guanosine nucleotides degradation III
Isop_0275	PWY-6609	adenine and adenosine salvage III
Isop_0275	PWY-6611	adenine and adenosine salvage V
Isop_0275	PWY-6620	guanine and guanosine salvage
Isop_0275	PWY-6627	salinosporamide A biosynthesis
Isop_0275	PWY-6644	fluoroacetate and fluorothreonine biosynthesis
Isop_0275	PWY-7179	purine deoxyribonucleosides degradation I
Isop_0275	PWY-7179-1	purine deoxyribonucleosides degradation
Isop_0283	PWY-5101	L-isoleucine biosynthesis II
Isop_0283	PWY-5103	L-isoleucine biosynthesis III
Isop_0283	PWY-5104	L-isoleucine biosynthesis IV
Isop_0283	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Isop_0284	PWY-5101	L-isoleucine biosynthesis II
Isop_0284	PWY-5103	L-isoleucine biosynthesis III
Isop_0284	PWY-5104	L-isoleucine biosynthesis IV
Isop_0284	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
Isop_0284	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
Isop_0284	PWY-6389	(<i>S</i>)-acetoin biosynthesis
Isop_0284	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Isop_0287	PWY-7247	&beta;-D-glucuronide and D-glucuronate degradation
Isop_0287	PWY-7248	pectin degradation III
Isop_0296	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
Isop_0296	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
Isop_0306	PWY-4041	&gamma;-glutamyl cycle
Isop_0306	PWY-5826	hypoglycin biosynthesis
Isop_0317	PWY-5839	menaquinol-7 biosynthesis
Isop_0317	PWY-5844	menaquinol-9 biosynthesis
Isop_0317	PWY-5849	menaquinol-6 biosynthesis
Isop_0317	PWY-5890	menaquinol-10 biosynthesis
Isop_0317	PWY-5891	menaquinol-11 biosynthesis
Isop_0317	PWY-5892	menaquinol-12 biosynthesis
Isop_0317	PWY-5895	menaquinol-13 biosynthesis
Isop_0326	PWY-5209	methyl-coenzyme M oxidation to CO<sub>2</sub>
Isop_0337	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Isop_0337	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
Isop_0351	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
Isop_0351	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
Isop_0351	PWY-6936	seleno-amino acid biosynthesis
Isop_0351	PWY-702	L-methionine biosynthesis II
Isop_0353	PWY-4261	glycerol degradation I
Isop_0396	PWY-3781	aerobic respiration I (cytochrome c)
Isop_0396	PWY-4521	arsenite oxidation I (respiratory)
Isop_0396	PWY-6692	Fe(II) oxidation
Isop_0396	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Isop_0436	PWY-6019	pseudouridine degradation
Isop_0438	PWY-3781	aerobic respiration I (cytochrome c)
Isop_0438	PWY-4302	aerobic respiration III (alternative oxidase pathway)
Isop_0438	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
Isop_0438	PWY-5690	TCA cycle II (plants and fungi)
Isop_0438	PWY-6728	methylaspartate cycle
Isop_0438	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Isop_0438	PWY-7254	TCA cycle VII (acetate-producers)
Isop_0438	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Isop_0439	PWY-3781	aerobic respiration I (cytochrome c)
Isop_0439	PWY-4302	aerobic respiration III (alternative oxidase pathway)
Isop_0439	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
Isop_0439	PWY-5690	TCA cycle II (plants and fungi)
Isop_0439	PWY-6728	methylaspartate cycle
Isop_0439	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Isop_0439	PWY-7254	TCA cycle VII (acetate-producers)
Isop_0439	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Isop_0450	PWY-4381	fatty acid biosynthesis initiation I
Isop_0450	PWY-6799	fatty acid biosynthesis (plant mitochondria)
Isop_0450	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Isop_0451	PWY-5367	petroselinate biosynthesis
Isop_0451	PWY-5971	palmitate biosynthesis II (bacteria and plants)
Isop_0451	PWY-5973	<i>cis</i>-vaccenate biosynthesis
Isop_0451	PWY-5989	stearate biosynthesis II (bacteria and plants)
Isop_0451	PWY-5994	palmitate biosynthesis I (animals and fungi)
Isop_0451	PWY-6113	superpathway of mycolate biosynthesis
Isop_0451	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
Isop_0451	PWY-6519	8-amino-7-oxononanoate biosynthesis I
Isop_0451	PWY-6951	Isop_0451|Isop_0451|YP_004177595.1|GeneID:10154557
Isop_0451	PWY-7053	docosahexaenoate biosynthesis I (lower eukaryotes)
Isop_0451	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Isop_0451	PWYG-321	mycolate biosynthesis
Isop_0467	PWY-6749	CMP-legionaminate biosynthesis I
Isop_0492	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
Isop_0492	PWY-6855	chitin degradation I (archaea)
Isop_0492	PWY-6906	chitin derivatives degradation
Isop_0502	PWY-3821	galactose degradation III
Isop_0502	PWY-6317	galactose degradation I (Leloir pathway)
Isop_0502	PWY-6527	stachyose degradation
Isop_0519	PWY-5971	palmitate biosynthesis II (bacteria and plants)
Isop_0519	PWY-5973	<i>cis</i>-vaccenate biosynthesis
Isop_0519	PWY-5989	stearate biosynthesis II (bacteria and plants)
Isop_0519	PWY-5994	palmitate biosynthesis I (animals and fungi)
Isop_0519	PWY-6113	superpathway of mycolate biosynthesis
Isop_0519	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
Isop_0519	PWY-6519	8-amino-7-oxononanoate biosynthesis I
Isop_0519	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Isop_0519	PWYG-321	mycolate biosynthesis
Isop_0521	PWY-5971	palmitate biosynthesis II (bacteria and plants)
Isop_0521	PWY-5973	<i>cis</i>-vaccenate biosynthesis
Isop_0521	PWY-5989	stearate biosynthesis II (bacteria and plants)
Isop_0521	PWY-5994	palmitate biosynthesis I (animals and fungi)
Isop_0521	PWY-6113	superpathway of mycolate biosynthesis
Isop_0521	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
Isop_0521	PWY-6519	8-amino-7-oxononanoate biosynthesis I
Isop_0521	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Isop_0521	PWYG-321	mycolate biosynthesis
Isop_0525	PWY-6123	inosine-5'-phosphate biosynthesis I
Isop_0525	PWY-6124	inosine-5'-phosphate biosynthesis II
Isop_0525	PWY-7234	inosine-5'-phosphate biosynthesis III
Isop_0530	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
Isop_0530	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
Isop_0535	PWY-5958	acridone alkaloid biosynthesis
Isop_0535	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
Isop_0535	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
Isop_0551	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Isop_0553	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Isop_0561	PWY-3781	aerobic respiration I (cytochrome c)
Isop_0561	PWY-4521	arsenite oxidation I (respiratory)
Isop_0561	PWY-6692	Fe(II) oxidation
Isop_0561	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Isop_0562	PWY-3781	aerobic respiration I (cytochrome c)
Isop_0562	PWY-4521	arsenite oxidation I (respiratory)
Isop_0562	PWY-6692	Fe(II) oxidation
Isop_0562	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Isop_0573	PWY-43	putrescine biosynthesis II
Isop_0584	PWY-2941	L-lysine biosynthesis II
Isop_0584	PWY-2942	L-lysine biosynthesis III
Isop_0584	PWY-5097	L-lysine biosynthesis VI
Isop_0584	PWY-6559	spermidine biosynthesis II
Isop_0584	PWY-6562	norspermidine biosynthesis
Isop_0584	PWY-7153	grixazone biosynthesis
Isop_0585	PWY-1042	glycolysis IV (plant cytosol)
Isop_0585	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
Isop_0585	PWY-5484	glycolysis II (from fructose 6-phosphate)
Isop_0585	PWY-5723	Rubisco shunt
Isop_0585	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Isop_0585	PWY-6886	1-butanol autotrophic biosynthesis
Isop_0585	PWY-6901	superpathway of glucose and xylose degradation
Isop_0585	PWY-7003	glycerol degradation to butanol
Isop_0585	PWY-7124	ethylene biosynthesis V (engineered)
Isop_0585	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
Isop_0610	PWY-5750	itaconate biosynthesis
Isop_0610	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Isop_0610	PWY-6146	<i>Methanobacterium thermoautotrophicum</i> biosynthetic metabolism
Isop_0622	PWY-5674	nitrate reduction IV (dissimilatory)
Isop_0623	PWY-5674	nitrate reduction IV (dissimilatory)
Isop_0630	PWY-7205	CMP phosphorylation
Isop_0641	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Isop_0641	PWY-6416	quinate degradation II
Isop_0641	PWY-6707	gallate biosynthesis
Isop_0642	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Isop_0652	PWY-4981	L-proline biosynthesis II (from arginine)
Isop_0652	PWY-4984	urea cycle
Isop_0652	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Isop_0654	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Isop_0654	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Isop_0660	PWY-6123	inosine-5'-phosphate biosynthesis I
Isop_0660	PWY-6124	inosine-5'-phosphate biosynthesis II
Isop_0660	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Isop_0660	PWY-7234	inosine-5'-phosphate biosynthesis III
Isop_0661	PWY-6167	flavin biosynthesis II (archaea)
Isop_0668	PWY-2201	folate transformations I
Isop_0668	PWY-3841	folate transformations II
Isop_0704	PWY-381	nitrate reduction II (assimilatory)
Isop_0704	PWY-5675	nitrate reduction V (assimilatory)
Isop_0704	PWY-6549	L-glutamine biosynthesis III
Isop_0704	PWY-6963	ammonia assimilation cycle I
Isop_0704	PWY-6964	ammonia assimilation cycle II
Isop_0713	PWY-3461	L-tyrosine biosynthesis II
Isop_0713	PWY-3462	L-phenylalanine biosynthesis II
Isop_0713	PWY-6120	L-tyrosine biosynthesis III
Isop_0713	PWY-6627	salinosporamide A biosynthesis
Isop_0713	PWY-7432	L-phenylalanine biosynthesis III (cytosolic, plants)
Isop_0750	PWY-5971	palmitate biosynthesis II (bacteria and plants)
Isop_0750	PWY-5973	<i>cis</i>-vaccenate biosynthesis
Isop_0750	PWY-5989	stearate biosynthesis II (bacteria and plants)
Isop_0750	PWY-5994	palmitate biosynthesis I (animals and fungi)
Isop_0750	PWY-6113	superpathway of mycolate biosynthesis
Isop_0750	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
Isop_0750	PWY-6519	8-amino-7-oxononanoate biosynthesis I
Isop_0750	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Isop_0750	PWYG-321	mycolate biosynthesis
Isop_0756	PWY-7180	2'-deoxy-&alpha;-D-ribose 1-phosphate degradation
Isop_0800	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Isop_0800	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Isop_0815	PWY-6823	molybdenum cofactor biosynthesis
Isop_0815	PWY-6891	thiazole biosynthesis II (Bacillus)
Isop_0815	PWY-6892	thiazole biosynthesis I (E. coli)
Isop_0815	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
Isop_0834	PWY-5667	CDP-diacylglycerol biosynthesis I
Isop_0834	PWY-5981	CDP-diacylglycerol biosynthesis III
Isop_0836	PWY-5278	sulfite oxidation III
Isop_0836	PWY-5340	sulfate activation for sulfonation
Isop_0836	PWY-6683	sulfate reduction III (assimilatory)
Isop_0836	PWY-6932	selenate reduction
Isop_0858	PWY-5971	palmitate biosynthesis II (bacteria and plants)
Isop_0858	PWY-5973	<i>cis</i>-vaccenate biosynthesis
Isop_0858	PWY-5989	stearate biosynthesis II (bacteria and plants)
Isop_0858	PWY-5994	palmitate biosynthesis I (animals and fungi)
Isop_0858	PWY-6113	superpathway of mycolate biosynthesis
Isop_0858	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
Isop_0858	PWY-6519	8-amino-7-oxononanoate biosynthesis I
Isop_0858	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Isop_0858	PWYG-321	mycolate biosynthesis
Isop_0865	PWY-3781	aerobic respiration I (cytochrome c)
Isop_0865	PWY-4521	arsenite oxidation I (respiratory)
Isop_0865	PWY-6692	Fe(II) oxidation
Isop_0865	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Isop_0869	PWY-3781	aerobic respiration I (cytochrome c)
Isop_0869	PWY-4521	arsenite oxidation I (respiratory)
Isop_0869	PWY-6692	Fe(II) oxidation
Isop_0869	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Isop_0874	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
Isop_0880	PWY-6890	4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis
Isop_0884	PWY-5155	&beta;-alanine biosynthesis III
Isop_0906	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
Isop_0906	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Isop_0906	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
Isop_0906	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
Isop_0906	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
Isop_0906	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
Isop_0909	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Isop_0910	PWY-6123	inosine-5'-phosphate biosynthesis I
Isop_0910	PWY-6124	inosine-5'-phosphate biosynthesis II
Isop_0910	PWY-7234	inosine-5'-phosphate biosynthesis III
Isop_0915	PWY-66	GDP-L-fucose biosynthesis I (from GDP-D-mannose)
Isop_0932	PWY-6832	2-aminoethylphosphonate degradation II
Isop_0933	PWY-5101	L-isoleucine biosynthesis II
Isop_0933	PWY-5103	L-isoleucine biosynthesis III
Isop_0933	PWY-5104	L-isoleucine biosynthesis IV
Isop_0933	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
Isop_0933	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
Isop_0933	PWY-6389	(<i>S</i>)-acetoin biosynthesis
Isop_0933	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Isop_0970	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Isop_0987	PWY-7039	phosphatidate metabolism, as a signaling molecule
Isop_0994	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
Isop_1013	PWY-1723	formaldehyde oxidation V (H<sub>4</sub>MPT pathway)
Isop_1013	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Isop_1028	PWY-2661	trehalose biosynthesis V
Isop_1029	PWY-2661	trehalose biosynthesis V
Isop_1044	PWY-6556	pyrimidine ribonucleosides salvage II
Isop_1044	PWY-7181	pyrimidine deoxyribonucleosides degradation
Isop_1044	PWY-7193	pyrimidine ribonucleosides salvage I
Isop_1044	PWY-7199	pyrimidine deoxyribonucleosides salvage
Isop_1056	PWY-6683	sulfate reduction III (assimilatory)
Isop_1057	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
Isop_1057	PWY-2161	folate polyglutamylation
Isop_1057	PWY-2201	folate transformations I
Isop_1057	PWY-3841	folate transformations II
Isop_1070	PWY-5523	5,6-dimethylbenzimidazole biosynthesis
Isop_1070	PWY-6167	flavin biosynthesis II (archaea)
Isop_1070	PWY-6168	flavin biosynthesis III (fungi)
Isop_1077	PWY-1042	glycolysis IV (plant cytosol)
Isop_1077	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Isop_1077	PWY-5484	glycolysis II (from fructose 6-phosphate)
Isop_1077	PWY-6531	mannitol cycle
Isop_1077	PWY-7385	1,3-propanediol biosynthesis (engineered)
Isop_1092	PWY-6012	acyl carrier protein metabolism I
Isop_1092	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
Isop_1117	PWY-6788	cellulose degradation II (fungi)
Isop_1121	PWY-5484	glycolysis II (from fructose 6-phosphate)
Isop_1127	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
Isop_1133	PWY-7158	L-phenylalanine degradation V
Isop_1141	PWY-4983	L-citrulline-nitric oxide cycle
Isop_1141	PWY-4984	urea cycle
Isop_1141	PWY-5	canavanine biosynthesis
Isop_1141	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Isop_1141	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Isop_1142	PWY-2941	L-lysine biosynthesis II
Isop_1142	PWY-2942	L-lysine biosynthesis III
Isop_1142	PWY-5097	L-lysine biosynthesis VI
Isop_1151	PWY-7378	aminopropanol phosphate biosynthesis II
Isop_1165	PWY-5198	factor 420 biosynthesis
Isop_1171	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Isop_1171	PWY-5723	Rubisco shunt
Isop_1171	PWY-6891	thiazole biosynthesis II (Bacillus)
Isop_1171	PWY-6892	thiazole biosynthesis I (E. coli)
Isop_1171	PWY-6901	superpathway of glucose and xylose degradation
Isop_1171	PWY-7560	methylerythritol phosphate pathway II
Isop_1187	PWY-4381	fatty acid biosynthesis initiation I
Isop_1187	PWY-5743	3-hydroxypropanoate cycle
Isop_1187	PWY-5744	glyoxylate assimilation
Isop_1187	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Isop_1187	PWY-6679	jadomycin biosynthesis
Isop_1187	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Isop_1198	PWY-622	starch biosynthesis
Isop_1215	PWY-7183	pyrimidine nucleobases salvage I
Isop_1223	PWY-6605	adenine and adenosine salvage II
Isop_1223	PWY-6610	adenine and adenosine salvage IV
Isop_1225	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Isop_1225	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
Isop_1225	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
Isop_1230	PWY-2941	L-lysine biosynthesis II
Isop_1230	PWY-2942	L-lysine biosynthesis III
Isop_1230	PWY-5097	L-lysine biosynthesis VI
Isop_1255	PWY-6823	molybdenum cofactor biosynthesis
Isop_1294	PWY-5791	1,4-dihydroxy-2-naphthoate biosynthesis II (plants)
Isop_1294	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
Isop_1350	PWY-5747	2-methylcitrate cycle II
Isop_1354	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
Isop_1354	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
Isop_1355	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
Isop_1355	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
Isop_1355	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
Isop_1380	PWY-6483	ceramide degradation
Isop_1380	PWY-7119	sphingolipid recycling and degradation (yeast)
Isop_1388	PWY-5480	pyruvate fermentation to ethanol I
Isop_1388	PWY-5485	pyruvate fermentation to acetate IV
Isop_1388	PWY-5493	reductive monocarboxylic acid cycle
Isop_1413	PWY-5381	pyridine nucleotide cycling (plants)
Isop_1440	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
Isop_1440	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
Isop_1440	PWY-6896	thiamin salvage I
Isop_1440	PWY-6897	thiamin salvage II
Isop_1443	PWY-5381	pyridine nucleotide cycling (plants)
Isop_1443	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
Isop_1445	PWY-4361	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation
Isop_1445	PWY-7174	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation II
Isop_1450	PWY-3221	dTDP-L-rhamnose biosynthesis II
Isop_1450	PWY-6808	dTDP-D-forosamine biosynthesis
Isop_1450	PWY-6942	dTDP-D-desosamine biosynthesis
Isop_1450	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
Isop_1450	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
Isop_1450	PWY-6974	dTDP-L-olivose biosynthesis
Isop_1450	PWY-6976	dTDP-L-mycarose biosynthesis
Isop_1450	PWY-7104	dTDP-L-megosamine biosynthesis
Isop_1450	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
Isop_1450	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
Isop_1450	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
Isop_1450	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
Isop_1450	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
Isop_1450	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
Isop_1450	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
Isop_1450	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
Isop_1451	PWY-3221	dTDP-L-rhamnose biosynthesis II
Isop_1451	PWY-6808	dTDP-D-forosamine biosynthesis
Isop_1451	PWY-6942	dTDP-D-desosamine biosynthesis
Isop_1451	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
Isop_1451	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
Isop_1451	PWY-6974	dTDP-L-olivose biosynthesis
Isop_1451	PWY-6976	dTDP-L-mycarose biosynthesis
Isop_1451	PWY-7104	dTDP-L-megosamine biosynthesis
Isop_1451	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
Isop_1451	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
Isop_1451	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
Isop_1451	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
Isop_1451	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
Isop_1451	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
Isop_1451	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
Isop_1451	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
Isop_1457	PWY-6840	homoglutathione biosynthesis
Isop_1457	PWY-7255	ergothioneine biosynthesis I (bacteria)
Isop_1472	PWY-6700	queuosine biosynthesis
Isop_1489	PWY-4202	arsenate detoxification I (glutaredoxin)
Isop_1489	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
Isop_1489	PWY-6608	guanosine nucleotides degradation III
Isop_1489	PWY-6609	adenine and adenosine salvage III
Isop_1489	PWY-6611	adenine and adenosine salvage V
Isop_1489	PWY-6620	guanine and guanosine salvage
Isop_1489	PWY-6627	salinosporamide A biosynthesis
Isop_1489	PWY-6644	fluoroacetate and fluorothreonine biosynthesis
Isop_1489	PWY-7179	purine deoxyribonucleosides degradation I
Isop_1489	PWY-7179-1	purine deoxyribonucleosides degradation
Isop_1492	PWY-5686	UMP biosynthesis
Isop_1493	PWY-5686	UMP biosynthesis
Isop_1494	PWY-7183	pyrimidine nucleobases salvage I
Isop_1527	PWY-4381	fatty acid biosynthesis initiation I
Isop_1527	PWY-5743	3-hydroxypropanoate cycle
Isop_1527	PWY-5744	glyoxylate assimilation
Isop_1527	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Isop_1527	PWY-6679	jadomycin biosynthesis
Isop_1527	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Isop_1528	PWY-101	photosynthesis light reactions
Isop_1528	PWY-7230	ubiquinol-6 biosynthesis from 4-aminobenzoate (eukaryotic)
Isop_1551	PWY-6317	galactose degradation I (Leloir pathway)
Isop_1551	PWY-6527	stachyose degradation
Isop_1555	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
Isop_1555	PWY-7177	UTP and CTP dephosphorylation II
Isop_1555	PWY-7185	UTP and CTP dephosphorylation I
Isop_1559	PWY-6823	molybdenum cofactor biosynthesis
Isop_1580	PWY-6167	flavin biosynthesis II (archaea)
Isop_1580	PWY-6168	flavin biosynthesis III (fungi)
Isop_1580	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Isop_1582	PWY-5743	3-hydroxypropanoate cycle
Isop_1582	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Isop_1582	PWY-6728	methylaspartate cycle
Isop_1582	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Isop_1583	PWY-5743	3-hydroxypropanoate cycle
Isop_1583	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Isop_1583	PWY-6728	methylaspartate cycle
Isop_1583	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Isop_1585	PWY-6339	syringate degradation
Isop_1587	PWY-6339	syringate degradation
Isop_1588	PWY-4381	fatty acid biosynthesis initiation I
Isop_1588	PWY-5743	3-hydroxypropanoate cycle
Isop_1588	PWY-5744	glyoxylate assimilation
Isop_1588	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Isop_1588	PWY-6679	jadomycin biosynthesis
Isop_1588	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Isop_1589	PWY-5743	3-hydroxypropanoate cycle
Isop_1589	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Isop_1589	PWY-6728	methylaspartate cycle
Isop_1589	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Isop_1592	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
Isop_1592	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Isop_1592	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
Isop_1592	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
Isop_1592	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Isop_1592	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Isop_1592	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
Isop_1592	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
Isop_1622	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
Isop_1622	PWY-6148	tetrahydromethanopterin biosynthesis
Isop_1622	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
Isop_1622	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
Isop_1624	PWY-5437	L-threonine degradation I
Isop_1624	PWY-7013	L-1,2-propanediol degradation
Isop_1628	PWY-5482	pyruvate fermentation to acetate II
Isop_1628	PWY-5485	pyruvate fermentation to acetate IV
Isop_1628	PWY-5497	purine nucleobases degradation II (anaerobic)
Isop_1634	PWY-5481	pyruvate fermentation to lactate
Isop_1634	PWY-6901	superpathway of glucose and xylose degradation
Isop_1641	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
Isop_1641	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
Isop_1641	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Isop_1641	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
Isop_1641	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
Isop_1641	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
Isop_1641	PWY-7205	CMP phosphorylation
Isop_1641	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
Isop_1641	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Isop_1641	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
Isop_1641	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Isop_1641	PWY-7224	purine deoxyribonucleosides salvage
Isop_1641	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
Isop_1641	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
Isop_1657	PWY-6700	queuosine biosynthesis
Isop_1668	PWY-6483	ceramide degradation
Isop_1668	PWY-7119	sphingolipid recycling and degradation (yeast)
Isop_1669	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
Isop_1669	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
Isop_1683	PWY-5392	reductive TCA cycle II
Isop_1683	PWY-5537	pyruvate fermentation to acetate V
Isop_1683	PWY-5538	pyruvate fermentation to acetate VI
Isop_1683	PWY-5690	TCA cycle II (plants and fungi)
Isop_1683	PWY-5913	TCA cycle VI (obligate autotrophs)
Isop_1683	PWY-6728	methylaspartate cycle
Isop_1683	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Isop_1683	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Isop_1684	PWY-5392	reductive TCA cycle II
Isop_1684	PWY-5537	pyruvate fermentation to acetate V
Isop_1684	PWY-5538	pyruvate fermentation to acetate VI
Isop_1684	PWY-5690	TCA cycle II (plants and fungi)
Isop_1684	PWY-5913	TCA cycle VI (obligate autotrophs)
Isop_1684	PWY-6728	methylaspartate cycle
Isop_1684	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Isop_1684	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Isop_1689	PWY-3961	phosphopantothenate biosynthesis II
Isop_1692	PWY-6703	preQ<sub>0</sub> biosynthesis
Isop_1719	PWY-2781	<i>cis</i>-zeatin biosynthesis
Isop_1722	PWY-1042	glycolysis IV (plant cytosol)
Isop_1722	PWY-1622	formaldehyde assimilation I (serine pathway)
Isop_1722	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
Isop_1722	PWY-5484	glycolysis II (from fructose 6-phosphate)
Isop_1722	PWY-5723	Rubisco shunt
Isop_1722	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Isop_1722	PWY-6886	1-butanol autotrophic biosynthesis
Isop_1722	PWY-6901	superpathway of glucose and xylose degradation
Isop_1722	PWY-7003	glycerol degradation to butanol
Isop_1722	PWY-7124	ethylene biosynthesis V (engineered)
Isop_1722	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
Isop_1724	PWY-1622	formaldehyde assimilation I (serine pathway)
Isop_1724	PWY-5484	glycolysis II (from fructose 6-phosphate)
Isop_1743	PWY-5129	sphingolipid biosynthesis (plants)
Isop_1778	PWY-6938	NADH repair
Isop_1783	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
Isop_1783	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
Isop_1783	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
Isop_1784	PWY-6891	thiazole biosynthesis II (Bacillus)
Isop_1784	PWY-6892	thiazole biosynthesis I (E. coli)
Isop_1784	PWY-7560	methylerythritol phosphate pathway II
Isop_1787	PWY-6938	NADH repair
Isop_1798	PWY-6826	phosphatidylcholine biosynthesis VI
Isop_1802	PWY-5686	UMP biosynthesis
Isop_1807	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Isop_1807	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
Isop_1807	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
Isop_1809	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Isop_1809	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
Isop_1809	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
Isop_1810	PWY-7303	3-dimethylallyl-4-hydroxybenzoate biosynthesis
Isop_1819	PWY-6164	3-dehydroquinate biosynthesis I
Isop_1836	PWY-6599	guanine and guanosine salvage II
Isop_1836	PWY-6609	adenine and adenosine salvage III
Isop_1836	PWY-6610	adenine and adenosine salvage IV
Isop_1836	PWY-6620	guanine and guanosine salvage
Isop_1866	PWY-6654	phosphopantothenate biosynthesis III
Isop_1867	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Isop_1867	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Isop_1875	PWY-6012	acyl carrier protein metabolism I
Isop_1875	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
Isop_1877	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
Isop_1881	PWY-1042	glycolysis IV (plant cytosol)
Isop_1881	PWY-5484	glycolysis II (from fructose 6-phosphate)
Isop_1881	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Isop_1881	PWY-7003	glycerol degradation to butanol
Isop_1891	PWY-6167	flavin biosynthesis II (archaea)
Isop_1891	PWY-6168	flavin biosynthesis III (fungi)
Isop_1891	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
Isop_1895	PWY-5198	factor 420 biosynthesis
Isop_1895	PWY-7371	1,4-dihydroxy-6-naphthoate biosynthesis II
Isop_1895	PWY-7374	1,4-dihydroxy-6-naphthoate biosynthesis I
Isop_1971	PWY-4381	fatty acid biosynthesis initiation I
Isop_1994	PWY-622	starch biosynthesis
Isop_1999	PWY-5350	thiosulfate disproportionation III (rhodanese)
Isop_2001	PWY-4381	fatty acid biosynthesis initiation I
Isop_2001	PWY-6799	fatty acid biosynthesis (plant mitochondria)
Isop_2001	PWY-723	alkylnitronates degradation
Isop_2001	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Isop_2004	PWY-5971	palmitate biosynthesis II (bacteria and plants)
Isop_2004	PWY-5973	<i>cis</i>-vaccenate biosynthesis
Isop_2004	PWY-5989	stearate biosynthesis II (bacteria and plants)
Isop_2004	PWY-5994	palmitate biosynthesis I (animals and fungi)
Isop_2004	PWY-6113	superpathway of mycolate biosynthesis
Isop_2004	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
Isop_2004	PWY-6519	8-amino-7-oxononanoate biosynthesis I
Isop_2004	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Isop_2004	PWYG-321	mycolate biosynthesis
Isop_2005	PWY-4381	fatty acid biosynthesis initiation I
Isop_2016	PWY-6899	base-degraded thiamin salvage
Isop_2016	PWY-7356	thiamin salvage IV (yeast)
Isop_2023	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Isop_2023	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
Isop_2027	PWY-6910	hydroxymethylpyrimidine salvage
Isop_2027	PWY-7356	thiamin salvage IV (yeast)
Isop_2027	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
Isop_2040	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
Isop_2040	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
Isop_2050	PWY-2622	trehalose biosynthesis IV
Isop_2062	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Isop_2062	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
Isop_2062	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
Isop_2062	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
Isop_2068	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
Isop_2068	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
Isop_2068	PWY-6164	3-dehydroquinate biosynthesis I
Isop_2069	PWY-5350	thiosulfate disproportionation III (rhodanese)
Isop_2107	PWY-3341	L-proline biosynthesis III
Isop_2107	PWY-4981	L-proline biosynthesis II (from arginine)
Isop_2107	PWY-6344	L-ornithine degradation II (Stickland reaction)
Isop_2110	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
Isop_2110	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
Isop_2132	PWY-6823	molybdenum cofactor biosynthesis
Isop_2132	PWY-6891	thiazole biosynthesis II (Bacillus)
Isop_2132	PWY-6892	thiazole biosynthesis I (E. coli)
Isop_2132	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
Isop_2133	PWY-1622	formaldehyde assimilation I (serine pathway)
Isop_2133	PWY-181	photorespiration
Isop_2133	PWY-2161	folate polyglutamylation
Isop_2133	PWY-2201	folate transformations I
Isop_2133	PWY-3661	glycine betaine degradation I
Isop_2133	PWY-3661-1	glycine betaine degradation II (mammalian)
Isop_2133	PWY-3841	folate transformations II
Isop_2133	PWY-5497	purine nucleobases degradation II (anaerobic)
Isop_2134	PWY-7247	&beta;-D-glucuronide and D-glucuronate degradation
Isop_2134	PWY-7248	pectin degradation III
Isop_2172	PWY-1881	formate oxidation to CO<sub>2</sub>
Isop_2172	PWY-5497	purine nucleobases degradation II (anaerobic)
Isop_2172	PWY-6696	oxalate degradation III
Isop_2173	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
Isop_2173	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
Isop_2173	PWY-6897	thiamin salvage II
Isop_2173	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
Isop_2173	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
Isop_2173	PWY-7353	4-methyl-5(&beta;-hydroxyethyl)thiazole salvage (yeast)
Isop_2173	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
Isop_2179	PWY-7533	gliotoxin biosynthesis
Isop_2192	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Isop_2207	PWY-3841	folate transformations II
Isop_2207	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Isop_2207	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
Isop_2207	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
Isop_2207	PWY-7199	pyrimidine deoxyribonucleosides salvage
Isop_2207	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
Isop_2223	PWY-5874	heme degradation
Isop_2223	PWY-5915	phycoerythrobilin biosynthesis I
Isop_2223	PWY-5917	phycocyanobilin biosynthesis
Isop_2223	PWY-7170	phytochromobilin biosynthesis
Isop_2242	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
Isop_2242	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
Isop_2242	PWY-6164	3-dehydroquinate biosynthesis I
Isop_2261	PWY-4041	&gamma;-glutamyl cycle
Isop_2261	PWY-5826	hypoglycin biosynthesis
Isop_2264	PWY-2941	L-lysine biosynthesis II
Isop_2264	PWY-2942	L-lysine biosynthesis III
Isop_2264	PWY-5097	L-lysine biosynthesis VI
Isop_2273	PWY-2161	folate polyglutamylation
Isop_2276	PWY-7560	methylerythritol phosphate pathway II
Isop_2285	PWY-6098	diploterol and cycloartenol biosynthesis
Isop_2285	PWY-7072	hopanoid biosynthesis (bacteria)
Isop_2293	PWY-6936	seleno-amino acid biosynthesis
Isop_2296	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Isop_2332	PWY-6483	ceramide degradation
Isop_2332	PWY-7119	sphingolipid recycling and degradation (yeast)
Isop_2355	PWY-6784	cellulose and hemicellulose degradation (cellulolosome)
Isop_2357	PWY-622	starch biosynthesis
Isop_2366	PWY-5674	nitrate reduction IV (dissimilatory)
Isop_2372	PWY-5971	palmitate biosynthesis II (bacteria and plants)
Isop_2372	PWY-5973	<i>cis</i>-vaccenate biosynthesis
Isop_2372	PWY-5989	stearate biosynthesis II (bacteria and plants)
Isop_2372	PWY-6113	superpathway of mycolate biosynthesis
Isop_2372	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
Isop_2372	PWY-6519	8-amino-7-oxononanoate biosynthesis I
Isop_2372	PWY-7096	triclosan resistance
Isop_2372	PWYG-321	mycolate biosynthesis
Isop_2384	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
Isop_2402	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
Isop_2402	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
Isop_2402	PWY-6269	adenosylcobalamin salvage from cobinamide II
Isop_2403	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
Isop_2403	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
Isop_2403	PWY-6269	adenosylcobalamin salvage from cobinamide II
Isop_2404	PWY-6482	diphthamide biosynthesis (archaea)
Isop_2404	PWY-7546	diphthamide biosynthesis (eukaryotes)
Isop_2469	PWY-1361	benzoyl-CoA degradation I (aerobic)
Isop_2469	PWY-5109	2-methylbutanoate biosynthesis
Isop_2469	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
Isop_2469	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
Isop_2469	PWY-5177	glutaryl-CoA degradation
Isop_2469	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Isop_2469	PWY-6435	4-hydroxybenzoate biosynthesis V
Isop_2469	PWY-6583	pyruvate fermentation to butanol I
Isop_2469	PWY-6863	pyruvate fermentation to hexanol
Isop_2469	PWY-6883	pyruvate fermentation to butanol II
Isop_2469	PWY-6944	androstenedione degradation
Isop_2469	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
Isop_2469	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
Isop_2469	PWY-7007	methyl ketone biosynthesis
Isop_2469	PWY-7046	4-coumarate degradation (anaerobic)
Isop_2469	PWY-7094	fatty acid salvage
Isop_2469	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
Isop_2469	PWY-735	jasmonic acid biosynthesis
Isop_2469	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
Isop_2476	PWY-4261	glycerol degradation I
Isop_2482	PWY-6167	flavin biosynthesis II (archaea)
Isop_2482	PWY-6168	flavin biosynthesis III (fungi)
Isop_2501	PWY-6854	ethylene biosynthesis III (microbes)
Isop_2505	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Isop_2529	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
Isop_2529	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
Isop_2569	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
Isop_2577	PWY-4202	arsenate detoxification I (glutaredoxin)
Isop_2582	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Isop_2583	PWY-3841	folate transformations II
Isop_2583	PWY-6614	tetrahydrofolate biosynthesis
Isop_2595	PWY-1042	glycolysis IV (plant cytosol)
Isop_2595	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Isop_2595	PWY-5484	glycolysis II (from fructose 6-phosphate)
Isop_2595	PWY-7385	1,3-propanediol biosynthesis (engineered)
Isop_2606	PWY-5392	reductive TCA cycle II
Isop_2606	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
Isop_2606	PWY-5690	TCA cycle II (plants and fungi)
Isop_2606	PWY-5913	TCA cycle VI (obligate autotrophs)
Isop_2606	PWY-6728	methylaspartate cycle
Isop_2606	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Isop_2606	PWY-7254	TCA cycle VII (acetate-producers)
Isop_2606	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Isop_2614	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Isop_2614	PWY-5723	Rubisco shunt
Isop_2615	PWY-3801	sucrose degradation II (sucrose synthase)
Isop_2615	PWY-5054	sorbitol biosynthesis I
Isop_2615	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
Isop_2615	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
Isop_2615	PWY-5659	GDP-mannose biosynthesis
Isop_2615	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Isop_2615	PWY-621	sucrose degradation III (sucrose invertase)
Isop_2615	PWY-622	starch biosynthesis
Isop_2615	PWY-6531	mannitol cycle
Isop_2615	PWY-6981	chitin biosynthesis
Isop_2615	PWY-7238	sucrose biosynthesis II
Isop_2615	PWY-7347	sucrose biosynthesis III
Isop_2615	PWY-7385	1,3-propanediol biosynthesis (engineered)
Isop_2634	PWY-5532	adenosine nucleotides degradation IV
Isop_2634	PWY-5723	Rubisco shunt
Isop_2641	PWY-6672	<i>cis</i>-genanyl-CoA degradation
Isop_2641	PWY-7118	chitin degradation to ethanol
Isop_2650	PWY-5958	acridone alkaloid biosynthesis
Isop_2650	PWY-6543	4-aminobenzoate biosynthesis
Isop_2650	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
Isop_2650	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
Isop_2650	PWY-6722	candicidin biosynthesis
Isop_2659	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
Isop_2659	PWY-6596	adenosine nucleotides degradation I
Isop_2659	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
Isop_2662	PWY-7560	methylerythritol phosphate pathway II
Isop_2669	PWY-6871	3-methylbutanol biosynthesis
Isop_2674	PWY-5057	L-valine degradation II
Isop_2674	PWY-5076	L-leucine degradation III
Isop_2674	PWY-5078	L-isoleucine degradation II
Isop_2674	PWY-5101	L-isoleucine biosynthesis II
Isop_2674	PWY-5103	L-isoleucine biosynthesis III
Isop_2674	PWY-5104	L-isoleucine biosynthesis IV
Isop_2674	PWY-5108	L-isoleucine biosynthesis V
Isop_2690	PWY-7052	cyanophycin metabolism
Isop_2691	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
Isop_2696	PWY-5381	pyridine nucleotide cycling (plants)
Isop_2696	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
Isop_2718	PWY-5316	nicotine biosynthesis
Isop_2718	PWY-7342	superpathway of nicotine biosynthesis
Isop_2724	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Isop_2724	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Isop_2746	PWY-5988	wound-induced proteolysis I
Isop_2746	PWY-6018	seed germination protein turnover
Isop_2771	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Isop_2771	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Isop_2784	PWY-5316	nicotine biosynthesis
Isop_2784	PWY-5381	pyridine nucleotide cycling (plants)
Isop_2784	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
Isop_2784	PWY-7342	superpathway of nicotine biosynthesis
Isop_2785	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
Isop_2785	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
Isop_2794	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
Isop_2794	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
Isop_2809	PWY-5964	guanylyl molybdenum cofactor biosynthesis
Isop_2818	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
Isop_2818	PWY-6549	L-glutamine biosynthesis III
Isop_2818	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
Isop_2818	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
Isop_2834	PWY-5913	TCA cycle VI (obligate autotrophs)
Isop_2834	PWY-6549	L-glutamine biosynthesis III
Isop_2834	PWY-6728	methylaspartate cycle
Isop_2834	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Isop_2834	PWY-7124	ethylene biosynthesis V (engineered)
Isop_2834	PWY-7254	TCA cycle VII (acetate-producers)
Isop_2834	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
Isop_2843	PWY-5663	tetrahydrobiopterin biosynthesis I
Isop_2843	PWY-5664	tetrahydrobiopterin biosynthesis II
Isop_2843	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
Isop_2843	PWY-6703	preQ<sub>0</sub> biosynthesis
Isop_2843	PWY-6983	tetrahydrobiopterin biosynthesis III
Isop_2843	PWY-7442	drosopterin and aurodrosopterin biosynthesis
Isop_2864	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
Isop_2867	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
Isop_2886	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
Isop_2886	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
Isop_2886	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
Isop_2901	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
Isop_2901	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
Isop_2901	PWY-6897	thiamin salvage II
Isop_2901	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
Isop_2901	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
Isop_2901	PWY-7353	4-methyl-5(&beta;-hydroxyethyl)thiazole salvage (yeast)
Isop_2901	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
Isop_2909	PWY-4983	L-citrulline-nitric oxide cycle
Isop_2909	PWY-4984	urea cycle
Isop_2909	PWY-5	canavanine biosynthesis
Isop_2909	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Isop_2909	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Isop_2916	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Isop_2923	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
Isop_2925	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
Isop_2956	PWY-5686	UMP biosynthesis
Isop_2970	PWY-1042	glycolysis IV (plant cytosol)
Isop_2970	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Isop_2970	PWY-5484	glycolysis II (from fructose 6-phosphate)
Isop_2970	PWY-7385	1,3-propanediol biosynthesis (engineered)
Isop_2982	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
Isop_2982	PWY-7328	superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
Isop_2997	PWY-6829	tRNA methylation (yeast)
Isop_2997	PWY-7285	methylwyosine biosynthesis
Isop_2997	PWY-7286	7-(3-amino-3-carboxypropyl)-wyosine biosynthesis
Isop_2999	PWY-7181	pyrimidine deoxyribonucleosides degradation
Isop_3005	PWY-6823	molybdenum cofactor biosynthesis
Isop_3006	PWY-6823	molybdenum cofactor biosynthesis
Isop_3030	PWY-5381	pyridine nucleotide cycling (plants)
Isop_3030	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
Isop_3030	PWY-6596	adenosine nucleotides degradation I
Isop_3030	PWY-6606	guanosine nucleotides degradation II
Isop_3030	PWY-6607	guanosine nucleotides degradation I
Isop_3030	PWY-6608	guanosine nucleotides degradation III
Isop_3030	PWY-7185	UTP and CTP dephosphorylation I
Isop_3038	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
Isop_3038	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
Isop_3038	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
Isop_3044	PWY-5738	GDP-6-deoxy-D-talose biosynthesis
Isop_3044	PWY-5739	GDP-D-perosamine biosynthesis
Isop_3044	PWY-5740	GDP-L-colitose biosynthesis
Isop_3044	PWY-66	GDP-L-fucose biosynthesis I (from GDP-D-mannose)
Isop_3050	PWY-1622	formaldehyde assimilation I (serine pathway)
Isop_3050	PWY-5392	reductive TCA cycle II
Isop_3050	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
Isop_3050	PWY-5690	TCA cycle II (plants and fungi)
Isop_3050	PWY-5913	TCA cycle VI (obligate autotrophs)
Isop_3050	PWY-6728	methylaspartate cycle
Isop_3050	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Isop_3050	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
Isop_3050	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
Isop_3055	PWY-6148	tetrahydromethanopterin biosynthesis
Isop_3063	PWY-5674	nitrate reduction IV (dissimilatory)
Isop_3073	PWY-4981	L-proline biosynthesis II (from arginine)
Isop_3093	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
Isop_3093	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
Isop_3093	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
Isop_3095	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
Isop_3103	PWY-5663	tetrahydrobiopterin biosynthesis I
Isop_3103	PWY-5664	tetrahydrobiopterin biosynthesis II
Isop_3103	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
Isop_3103	PWY-6703	preQ<sub>0</sub> biosynthesis
Isop_3103	PWY-6983	tetrahydrobiopterin biosynthesis III
Isop_3103	PWY-7442	drosopterin and aurodrosopterin biosynthesis
Isop_3104	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Isop_3104	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Isop_3115	PWY-7560	methylerythritol phosphate pathway II
Isop_3125	PWY-7335	UDP-<i>N</i>-acetyl-&alpha;-D-mannosaminouronate biosynthesis
Isop_3148	PWY-6123	inosine-5'-phosphate biosynthesis I
Isop_3148	PWY-7234	inosine-5'-phosphate biosynthesis III
Isop_3152	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
Isop_3152	PWY-622	starch biosynthesis
Isop_3156	PWY-5674	nitrate reduction IV (dissimilatory)
Isop_3160	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Isop_3160	PWY-5723	Rubisco shunt
Isop_3165	PWY-5101	L-isoleucine biosynthesis II
Isop_3165	PWY-5103	L-isoleucine biosynthesis III
Isop_3165	PWY-5104	L-isoleucine biosynthesis IV
Isop_3165	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Isop_3169	PWY-5316	nicotine biosynthesis
Isop_3169	PWY-7342	superpathway of nicotine biosynthesis
Isop_3171	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Isop_3171	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Isop_3191	PWY-7560	methylerythritol phosphate pathway II
Isop_3195	PWY-6936	seleno-amino acid biosynthesis
Isop_3195	PWY-7274	D-cycloserine biosynthesis
Isop_3208	PWY-1042	glycolysis IV (plant cytosol)
Isop_3208	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Isop_3208	PWY-5484	glycolysis II (from fructose 6-phosphate)
Isop_3208	PWY-6531	mannitol cycle
Isop_3208	PWY-7385	1,3-propanediol biosynthesis (engineered)
Isop_3214	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
Isop_3214	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
Isop_3229	PWY-5350	thiosulfate disproportionation III (rhodanese)
Isop_3233	PWY-1042	glycolysis IV (plant cytosol)
Isop_3233	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Isop_3233	PWY-5484	glycolysis II (from fructose 6-phosphate)
Isop_3233	PWY-7385	1,3-propanediol biosynthesis (engineered)
Isop_3272	PWY-3861	mannitol degradation II
Isop_3272	PWY-3881	mannitol biosynthesis
Isop_3272	PWY-5659	GDP-mannose biosynthesis
Isop_3272	PWY-7456	mannan degradation
Isop_3272	PWY-882	L-ascorbate biosynthesis I (L-galactose pathway)
Isop_3286	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
Isop_3286	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
Isop_3291	PWY-40	putrescine biosynthesis I
Isop_3291	PWY-43	putrescine biosynthesis II
Isop_3291	PWY-6305	putrescine biosynthesis IV
Isop_3291	PWY-6834	spermidine biosynthesis III
Isop_3300	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Isop_3300	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
Isop_3300	PWY-5194	siroheme biosynthesis
Isop_3300	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
Isop_3311	PWY-2201	folate transformations I
Isop_3311	PWY-3841	folate transformations II
Isop_3317	PWY-6483	ceramide degradation
Isop_3317	PWY-7119	sphingolipid recycling and degradation (yeast)
Isop_3320	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Isop_3320	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
Isop_3320	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
Isop_3324	PWY-6700	queuosine biosynthesis
Isop_3339	PWY-5101	L-isoleucine biosynthesis II
Isop_3339	PWY-5103	L-isoleucine biosynthesis III
Isop_3339	PWY-5104	L-isoleucine biosynthesis IV
Isop_3339	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Isop_3353	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Isop_3353	PWY-5686	UMP biosynthesis
Isop_3353	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Isop_3398	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Isop_3398	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Isop_3401	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
Isop_3401	PWY-6507	4-deoxy-L-<i>threo</i>-hex-4-enopyranuronate degradation
Isop_3401	PWY-7242	D-fructuronate degradation
Isop_3401	PWY-7310	D-glucosaminate degradation
Isop_3422	PWY-7206	pyrimidine deoxyribonucleotides dephosphorylation
Isop_3430	PWY-5958	acridone alkaloid biosynthesis
Isop_3430	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
Isop_3430	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
Isop_3431	PWY-6823	molybdenum cofactor biosynthesis
Isop_3453	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
Isop_3453	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
Isop_3453	PWY-6164	3-dehydroquinate biosynthesis I
Isop_3489	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Isop_3515	PWY-4381	fatty acid biosynthesis initiation I
Isop_3515	PWY-5743	3-hydroxypropanoate cycle
Isop_3515	PWY-5744	glyoxylate assimilation
Isop_3515	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Isop_3515	PWY-6679	jadomycin biosynthesis
Isop_3515	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Isop_3517	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Isop_3517	PWY-5723	Rubisco shunt
Isop_3518	PWY-1042	glycolysis IV (plant cytosol)
Isop_3518	PWY-5484	glycolysis II (from fructose 6-phosphate)
Isop_3518	PWY-6886	1-butanol autotrophic biosynthesis
Isop_3518	PWY-6901	superpathway of glucose and xylose degradation
Isop_3518	PWY-7003	glycerol degradation to butanol
Isop_3519	PWY-1042	glycolysis IV (plant cytosol)
Isop_3519	PWY-5484	glycolysis II (from fructose 6-phosphate)
Isop_3519	PWY-6901	superpathway of glucose and xylose degradation
Isop_3519	PWY-7003	glycerol degradation to butanol
Isop_3547	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Isop_3561	PWY-6614	tetrahydrofolate biosynthesis
Isop_3609	PWY-3821	galactose degradation III
Isop_3609	PWY-6317	galactose degradation I (Leloir pathway)
Isop_3609	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
Isop_3609	PWY-6527	stachyose degradation
Isop_3609	PWY-7328	superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
Isop_3609	PWY-7344	UDP-D-galactose biosynthesis
Isop_3619	PWY-6454	vancomycin resistance I
Isop_3619	PWY-6455	vancomycin resistance II
Isop_3628	PWY-5941	glycogen degradation II (eukaryotic)
Isop_3628	PWY-622	starch biosynthesis
Isop_3628	PWY-6731	starch degradation III
Isop_3628	PWY-6737	starch degradation V
Isop_3628	PWY-7238	sucrose biosynthesis II
Isop_3631	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
Isop_3633	PWY-5497	purine nucleobases degradation II (anaerobic)
Isop_3633	PWY-6606	guanosine nucleotides degradation II
Isop_3633	PWY-6608	guanosine nucleotides degradation III
Isop_3633	PWY-7442	drosopterin and aurodrosopterin biosynthesis
Isop_3662	PWY-7205	CMP phosphorylation
Isop_3681	PWY-7560	methylerythritol phosphate pathway II
Isop_3684	PWY-6891	thiazole biosynthesis II (Bacillus)
Isop_3684	PWY-6892	thiazole biosynthesis I (E. coli)
Isop_3697	PWY-5194	siroheme biosynthesis
Isop_3697	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
Isop_3721	PWY-6703	preQ<sub>0</sub> biosynthesis
Isop_3726	PWY-6832	2-aminoethylphosphonate degradation II
Isop_3728	PWY-7560	methylerythritol phosphate pathway II
Isop_3731	PWY-1042	glycolysis IV (plant cytosol)
Isop_3731	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
Isop_3731	PWY-5484	glycolysis II (from fructose 6-phosphate)
Isop_3731	PWY-5723	Rubisco shunt
Isop_3731	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Isop_3731	PWY-6886	1-butanol autotrophic biosynthesis
Isop_3731	PWY-6901	superpathway of glucose and xylose degradation
Isop_3731	PWY-7003	glycerol degradation to butanol
Isop_3731	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
Isop_3731	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
Isop_R0025	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
Isop_R0025	PWY-6855	chitin degradation I (archaea)
Isop_R0025	PWY-6906	chitin derivatives degradation
