Jann_0016	PWY-4981	L-proline biosynthesis II (from arginine)
Jann_0022	PWY-5381	pyridine nucleotide cycling (plants)
Jann_0028	PWY-5913	TCA cycle VI (obligate autotrophs)
Jann_0028	PWY-6318	L-phenylalanine degradation IV (mammalian, via side chain)
Jann_0028	PWY-6638	sulfolactate degradation III
Jann_0028	PWY-6642	(<i>R</i>)-cysteate degradation
Jann_0028	PWY-6643	coenzyme M biosynthesis II
Jann_0028	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
Jann_0028	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
Jann_0028	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
Jann_0030	PWY-5350	thiosulfate disproportionation III (rhodanese)
Jann_0033	PWY-2941	L-lysine biosynthesis II
Jann_0033	PWY-2942	L-lysine biosynthesis III
Jann_0033	PWY-5097	L-lysine biosynthesis VI
Jann_0044	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
Jann_0044	PWY-3162	L-tryptophan degradation V (side chain pathway)
Jann_0044	PWY-5057	L-valine degradation II
Jann_0044	PWY-5076	L-leucine degradation III
Jann_0044	PWY-5078	L-isoleucine degradation II
Jann_0044	PWY-5079	L-phenylalanine degradation III
Jann_0044	PWY-5082	L-methionine degradation III
Jann_0044	PWY-5480	pyruvate fermentation to ethanol I
Jann_0044	PWY-5486	pyruvate fermentation to ethanol II
Jann_0044	PWY-5751	phenylethanol biosynthesis
Jann_0044	PWY-6028	acetoin degradation
Jann_0044	PWY-6313	serotonin degradation
Jann_0044	PWY-6333	acetaldehyde biosynthesis I
Jann_0044	PWY-6342	noradrenaline and adrenaline degradation
Jann_0044	PWY-6587	pyruvate fermentation to ethanol III
Jann_0044	PWY-6802	salidroside biosynthesis
Jann_0044	PWY-6871	3-methylbutanol biosynthesis
Jann_0044	PWY-7013	L-1,2-propanediol degradation
Jann_0044	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Jann_0044	PWY-7118	chitin degradation to ethanol
Jann_0044	PWY-7396	butanol and isobutanol biosynthesis (engineered)
Jann_0044	PWY-7557	dehydrodiconiferyl alcohol degradation
Jann_0052	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
Jann_0059	PWY-2161	folate polyglutamylation
Jann_0060	PWY-4381	fatty acid biosynthesis initiation I
Jann_0060	PWY-5743	3-hydroxypropanoate cycle
Jann_0060	PWY-5744	glyoxylate assimilation
Jann_0060	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Jann_0060	PWY-6679	jadomycin biosynthesis
Jann_0060	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Jann_0062	PWY-5101	L-isoleucine biosynthesis II
Jann_0062	PWY-5103	L-isoleucine biosynthesis III
Jann_0062	PWY-5104	L-isoleucine biosynthesis IV
Jann_0062	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Jann_0067	PWY-4983	L-citrulline-nitric oxide cycle
Jann_0067	PWY-4984	urea cycle
Jann_0067	PWY-5	canavanine biosynthesis
Jann_0067	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Jann_0067	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Jann_0076	PWY-7346	UDP-&alpha;-D-glucuronate biosynthesis (from UDP-glucose)
Jann_0088	PWY-6891	thiazole biosynthesis II (Bacillus)
Jann_0088	PWY-6892	thiazole biosynthesis I (E. coli)
Jann_0088	PWY-7560	methylerythritol phosphate pathway II
Jann_0094	PWY-5057	L-valine degradation II
Jann_0094	PWY-5076	L-leucine degradation III
Jann_0094	PWY-5078	L-isoleucine degradation II
Jann_0094	PWY-5101	L-isoleucine biosynthesis II
Jann_0094	PWY-5103	L-isoleucine biosynthesis III
Jann_0094	PWY-5104	L-isoleucine biosynthesis IV
Jann_0094	PWY-5108	L-isoleucine biosynthesis V
Jann_0106	PWY-5988	wound-induced proteolysis I
Jann_0106	PWY-6018	seed germination protein turnover
Jann_0108	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
Jann_0108	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Jann_0108	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
Jann_0108	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
Jann_0114	PWY-2941	L-lysine biosynthesis II
Jann_0114	PWY-2942	L-lysine biosynthesis III
Jann_0114	PWY-5097	L-lysine biosynthesis VI
Jann_0114	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Jann_0114	PWY-6559	spermidine biosynthesis II
Jann_0114	PWY-6562	norspermidine biosynthesis
Jann_0114	PWY-7153	grixazone biosynthesis
Jann_0114	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Jann_0128	PWY-7396	butanol and isobutanol biosynthesis (engineered)
Jann_0145	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
Jann_0145	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
Jann_0147	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
Jann_0147	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
Jann_0149	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
Jann_0149	PWY-7536	2-amino-3-hydroxycyclopent-2-enone biosynthesis
Jann_0157	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
Jann_0157	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
Jann_0158	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
Jann_0158	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
Jann_0159	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
Jann_0159	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
Jann_0160	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
Jann_0160	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
Jann_0161	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
Jann_0161	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
Jann_0168	PWY-5123	<i>trans, trans</i>-farnesyl diphosphate biosynthesis
Jann_0168	PWY-6174	mevalonate pathway II (archaea)
Jann_0168	PWY-6383	mono-<i>trans</i>, poly-<i>cis</i> decaprenyl phosphate biosynthesis
Jann_0168	PWY-6859	<i>all-trans</i>-farnesol biosynthesis
Jann_0168	PWY-7102	bisabolene biosynthesis
Jann_0168	PWY-7391	isoprene biosynthesis II (engineered)
Jann_0168	PWY-7524	mevalonate pathway III (archaea)
Jann_0168	PWY-7560	methylerythritol phosphate pathway II
Jann_0168	PWY-922	mevalonate pathway I
Jann_0170	PWY-6891	thiazole biosynthesis II (Bacillus)
Jann_0170	PWY-6892	thiazole biosynthesis I (E. coli)
Jann_0170	PWY-7560	methylerythritol phosphate pathway II
Jann_0172	PWY-101	photosynthesis light reactions
Jann_0172	PWY-6785	hydrogen production VIII
Jann_0173	PWY-101	photosynthesis light reactions
Jann_0173	PWY-6785	hydrogen production VIII
Jann_0177	PWY-5526	bacteriochlorophyll <i>a</i> biosynthesis
Jann_0177	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
Jann_0177	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
Jann_0178	PWY-5526	bacteriochlorophyll <i>a</i> biosynthesis
Jann_0178	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
Jann_0178	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
Jann_0179	PWY-5526	bacteriochlorophyll <i>a</i> biosynthesis
Jann_0196	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Jann_0198	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Jann_0205	PWY-7206	pyrimidine deoxyribonucleotides dephosphorylation
Jann_0210	PWY-1281	sulfoacetaldehyde degradation I
Jann_0210	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
Jann_0210	PWY-5482	pyruvate fermentation to acetate II
Jann_0210	PWY-5485	pyruvate fermentation to acetate IV
Jann_0210	PWY-5497	purine nucleobases degradation II (anaerobic)
Jann_0210	PWY-6637	sulfolactate degradation II
Jann_0210	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
Jann_0216	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
Jann_0216	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
Jann_0218	PWY-3801	sucrose degradation II (sucrose synthase)
Jann_0218	PWY-6527	stachyose degradation
Jann_0218	PWY-6981	chitin biosynthesis
Jann_0218	PWY-7238	sucrose biosynthesis II
Jann_0218	PWY-7343	UDP-glucose biosynthesis
Jann_0250	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
Jann_0277	PWY-40	putrescine biosynthesis I
Jann_0277	PWY-6305	putrescine biosynthesis IV
Jann_0291	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Jann_0292	PWY-6502	oxidized GTP and dGTP detoxification
Jann_0298	PWY-5855	ubiquinol-7 biosynthesis (prokaryotic)
Jann_0298	PWY-5856	ubiquinol-9 biosynthesis (prokaryotic)
Jann_0298	PWY-5857	ubiquinol-10 biosynthesis (prokaryotic)
Jann_0298	PWY-5870	ubiquinol-8 biosynthesis (eukaryotic)
Jann_0298	PWY-5871	ubiquinol-9 biosynthesis (eukaryotic)
Jann_0298	PWY-5872	ubiquinol-10 biosynthesis (eukaryotic)
Jann_0298	PWY-5873	ubiquinol-7 biosynthesis (eukaryotic)
Jann_0298	PWY-6708	ubiquinol-8 biosynthesis (prokaryotic)
Jann_0298	PWY-7230	ubiquinol-6 biosynthesis from 4-aminobenzoate (eukaryotic)
Jann_0298	PWY-7233	ubiquinol-6 bypass biosynthesis (eukaryotic)
Jann_0318	PWY-2941	L-lysine biosynthesis II
Jann_0318	PWY-5097	L-lysine biosynthesis VI
Jann_0324	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
Jann_0324	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
Jann_0325	PWY-3781	aerobic respiration I (cytochrome c)
Jann_0325	PWY-6692	Fe(II) oxidation
Jann_0325	PWY-7082	ammonia oxidation IV (autotrophic ammonia oxidizers)
Jann_0325	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Jann_0331	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Jann_0337	PWY-6617	adenosine nucleotides degradation III
Jann_0338	PWY-6610	adenine and adenosine salvage IV
Jann_0368	PWY-4061	glutathione-mediated detoxification I
Jann_0368	PWY-6842	glutathione-mediated detoxification II
Jann_0368	PWY-7112	4-hydroxy-2-nonenal detoxification
Jann_0368	PWY-7533	gliotoxin biosynthesis
Jann_0379	PWY-1042	glycolysis IV (plant cytosol)
Jann_0379	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
Jann_0379	PWY-5484	glycolysis II (from fructose 6-phosphate)
Jann_0379	PWY-5723	Rubisco shunt
Jann_0379	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Jann_0379	PWY-6886	1-butanol autotrophic biosynthesis
Jann_0379	PWY-6901	superpathway of glucose and xylose degradation
Jann_0379	PWY-7003	glycerol degradation to butanol
Jann_0379	PWY-7124	ethylene biosynthesis V (engineered)
Jann_0379	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
Jann_0414	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
Jann_0416	PWY-6168	flavin biosynthesis III (fungi)
Jann_0416	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
Jann_0426	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
Jann_0438	PWY-7158	L-phenylalanine degradation V
Jann_0447	PWY-1042	glycolysis IV (plant cytosol)
Jann_0447	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
Jann_0447	PWY-5484	glycolysis II (from fructose 6-phosphate)
Jann_0447	PWY-5723	Rubisco shunt
Jann_0447	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Jann_0447	PWY-6886	1-butanol autotrophic biosynthesis
Jann_0447	PWY-6901	superpathway of glucose and xylose degradation
Jann_0447	PWY-7003	glycerol degradation to butanol
Jann_0447	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
Jann_0447	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
Jann_0462	PWY-5964	guanylyl molybdenum cofactor biosynthesis
Jann_0465	PWY-6936	seleno-amino acid biosynthesis
Jann_0473	PWY-4381	fatty acid biosynthesis initiation I
Jann_0473	PWY-5743	3-hydroxypropanoate cycle
Jann_0473	PWY-5744	glyoxylate assimilation
Jann_0473	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Jann_0473	PWY-6679	jadomycin biosynthesis
Jann_0473	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Jann_0475	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
Jann_0475	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
Jann_0481	PWY-2941	L-lysine biosynthesis II
Jann_0481	PWY-2942	L-lysine biosynthesis III
Jann_0481	PWY-5097	L-lysine biosynthesis VI
Jann_0486	PWY-7560	methylerythritol phosphate pathway II
Jann_0492	PWY-5676	acetyl-CoA fermentation to butanoate II
Jann_0492	PWY-5741	ethylmalonyl-CoA pathway
Jann_0492	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
Jann_0497	PWY-4983	L-citrulline-nitric oxide cycle
Jann_0497	PWY-4984	urea cycle
Jann_0497	PWY-5	canavanine biosynthesis
Jann_0497	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Jann_0497	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Jann_0506	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
Jann_0506	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
Jann_0507	PWY-7560	methylerythritol phosphate pathway II
Jann_0512	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
Jann_0512	PWY-6148	tetrahydromethanopterin biosynthesis
Jann_0512	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
Jann_0512	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
Jann_0520	PWY-6012	acyl carrier protein metabolism I
Jann_0520	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
Jann_0535	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
Jann_0535	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
Jann_0543	PWY-1361	benzoyl-CoA degradation I (aerobic)
Jann_0543	PWY-5109	2-methylbutanoate biosynthesis
Jann_0543	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
Jann_0543	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
Jann_0543	PWY-5177	glutaryl-CoA degradation
Jann_0543	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Jann_0543	PWY-6435	4-hydroxybenzoate biosynthesis V
Jann_0543	PWY-6583	pyruvate fermentation to butanol I
Jann_0543	PWY-6863	pyruvate fermentation to hexanol
Jann_0543	PWY-6883	pyruvate fermentation to butanol II
Jann_0543	PWY-6944	androstenedione degradation
Jann_0543	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
Jann_0543	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
Jann_0543	PWY-7007	methyl ketone biosynthesis
Jann_0543	PWY-7046	4-coumarate degradation (anaerobic)
Jann_0543	PWY-7094	fatty acid salvage
Jann_0543	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
Jann_0543	PWY-735	jasmonic acid biosynthesis
Jann_0543	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
Jann_0549	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
Jann_0549	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
Jann_0549	PWY-6268	adenosylcobalamin salvage from cobalamin
Jann_0549	PWY-6269	adenosylcobalamin salvage from cobinamide II
Jann_0613	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Jann_0620	PWY-6157	autoinducer AI-1 biosynthesis
Jann_0633	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Jann_0633	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Jann_0650	PWY-1361	benzoyl-CoA degradation I (aerobic)
Jann_0650	PWY-2361	3-oxoadipate degradation
Jann_0650	PWY-6185	4-methylcatechol degradation (<i>ortho</i> cleavage)
Jann_0656	PWY-1341	phenylacetate degradation II (anaerobic)
Jann_0656	PWY-6318	L-phenylalanine degradation IV (mammalian, via side chain)
Jann_0671	PWY-1361	benzoyl-CoA degradation I (aerobic)
Jann_0672	PWY-1361	benzoyl-CoA degradation I (aerobic)
Jann_0675	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Jann_0676	PWY-1361	benzoyl-CoA degradation I (aerobic)
Jann_0676	PWY-5109	2-methylbutanoate biosynthesis
Jann_0676	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
Jann_0676	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
Jann_0676	PWY-5177	glutaryl-CoA degradation
Jann_0676	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Jann_0676	PWY-6435	4-hydroxybenzoate biosynthesis V
Jann_0676	PWY-6583	pyruvate fermentation to butanol I
Jann_0676	PWY-6863	pyruvate fermentation to hexanol
Jann_0676	PWY-6883	pyruvate fermentation to butanol II
Jann_0676	PWY-6944	androstenedione degradation
Jann_0676	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
Jann_0676	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
Jann_0676	PWY-7007	methyl ketone biosynthesis
Jann_0676	PWY-7046	4-coumarate degradation (anaerobic)
Jann_0676	PWY-7094	fatty acid salvage
Jann_0676	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
Jann_0676	PWY-735	jasmonic acid biosynthesis
Jann_0676	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
Jann_0690	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Jann_0690	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Jann_0691	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Jann_0691	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Jann_0706	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
Jann_0706	PWY-5912	2'-deoxymugineic acid phytosiderophore biosynthesis
Jann_0708	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Jann_0713	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
Jann_0715	PWY-7205	CMP phosphorylation
Jann_0744	PWY-6829	tRNA methylation (yeast)
Jann_0744	PWY-7285	methylwyosine biosynthesis
Jann_0744	PWY-7286	7-(3-amino-3-carboxypropyl)-wyosine biosynthesis
Jann_0750	PWY-3461	L-tyrosine biosynthesis II
Jann_0750	PWY-3462	L-phenylalanine biosynthesis II
Jann_0750	PWY-6120	L-tyrosine biosynthesis III
Jann_0750	PWY-6627	salinosporamide A biosynthesis
Jann_0772	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Jann_0789	PWY-7180	2'-deoxy-&alpha;-D-ribose 1-phosphate degradation
Jann_0790	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Jann_0790	PWY-5723	Rubisco shunt
Jann_0795	PWY-5667	CDP-diacylglycerol biosynthesis I
Jann_0795	PWY-7411	superpathway of phosphatidate biosynthesis (yeast)
Jann_0797	PWY-5743	3-hydroxypropanoate cycle
Jann_0797	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Jann_0797	PWY-6728	methylaspartate cycle
Jann_0797	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Jann_0799	PWY-4202	arsenate detoxification I (glutaredoxin)
Jann_0799	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
Jann_0799	PWY-6608	guanosine nucleotides degradation III
Jann_0799	PWY-6609	adenine and adenosine salvage III
Jann_0799	PWY-6611	adenine and adenosine salvage V
Jann_0799	PWY-6620	guanine and guanosine salvage
Jann_0799	PWY-6627	salinosporamide A biosynthesis
Jann_0799	PWY-6644	fluoroacetate and fluorothreonine biosynthesis
Jann_0799	PWY-7179	purine deoxyribonucleosides degradation I
Jann_0799	PWY-7179-1	purine deoxyribonucleosides degradation
Jann_0804	PWY-3781	aerobic respiration I (cytochrome c)
Jann_0804	PWY-4302	aerobic respiration III (alternative oxidase pathway)
Jann_0804	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
Jann_0804	PWY-5690	TCA cycle II (plants and fungi)
Jann_0804	PWY-6728	methylaspartate cycle
Jann_0804	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Jann_0804	PWY-7254	TCA cycle VII (acetate-producers)
Jann_0804	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Jann_0809	PWY-3781	aerobic respiration I (cytochrome c)
Jann_0809	PWY-4302	aerobic respiration III (alternative oxidase pathway)
Jann_0809	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
Jann_0809	PWY-5690	TCA cycle II (plants and fungi)
Jann_0809	PWY-6728	methylaspartate cycle
Jann_0809	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Jann_0809	PWY-7254	TCA cycle VII (acetate-producers)
Jann_0809	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Jann_0813	PWY-5741	ethylmalonyl-CoA pathway
Jann_0813	PWY-5744	glyoxylate assimilation
Jann_0813	PWY-6728	methylaspartate cycle
Jann_0818	PWY-1622	formaldehyde assimilation I (serine pathway)
Jann_0818	PWY-5392	reductive TCA cycle II
Jann_0818	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
Jann_0818	PWY-5690	TCA cycle II (plants and fungi)
Jann_0818	PWY-5913	TCA cycle VI (obligate autotrophs)
Jann_0818	PWY-6728	methylaspartate cycle
Jann_0818	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Jann_0818	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
Jann_0818	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
Jann_0821	PWY-5392	reductive TCA cycle II
Jann_0821	PWY-5537	pyruvate fermentation to acetate V
Jann_0821	PWY-5538	pyruvate fermentation to acetate VI
Jann_0821	PWY-5690	TCA cycle II (plants and fungi)
Jann_0821	PWY-5913	TCA cycle VI (obligate autotrophs)
Jann_0821	PWY-6728	methylaspartate cycle
Jann_0821	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Jann_0821	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Jann_0827	PWY-5392	reductive TCA cycle II
Jann_0827	PWY-5537	pyruvate fermentation to acetate V
Jann_0827	PWY-5538	pyruvate fermentation to acetate VI
Jann_0827	PWY-5690	TCA cycle II (plants and fungi)
Jann_0827	PWY-5913	TCA cycle VI (obligate autotrophs)
Jann_0827	PWY-6728	methylaspartate cycle
Jann_0827	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Jann_0827	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Jann_0831	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
Jann_0832	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
Jann_0837	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
Jann_0837	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
Jann_0864	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
Jann_0884	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
Jann_0905	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
Jann_0905	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
Jann_0905	PWY-6269	adenosylcobalamin salvage from cobinamide II
Jann_0908	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
Jann_0908	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Jann_0908	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
Jann_0908	PWY-7206	pyrimidine deoxyribonucleotides dephosphorylation
Jann_0936	PWY-5497	purine nucleobases degradation II (anaerobic)
Jann_0936	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
Jann_0936	PWY-6538	caffeine degradation III (bacteria, via demethylation)
Jann_0936	PWY-6596	adenosine nucleotides degradation I
Jann_0936	PWY-6606	guanosine nucleotides degradation II
Jann_0936	PWY-6607	guanosine nucleotides degradation I
Jann_0936	PWY-6608	guanosine nucleotides degradation III
Jann_0936	PWY-6999	theophylline degradation
Jann_0937	PWY-5497	purine nucleobases degradation II (anaerobic)
Jann_0937	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
Jann_0937	PWY-6538	caffeine degradation III (bacteria, via demethylation)
Jann_0937	PWY-6596	adenosine nucleotides degradation I
Jann_0937	PWY-6606	guanosine nucleotides degradation II
Jann_0937	PWY-6607	guanosine nucleotides degradation I
Jann_0937	PWY-6608	guanosine nucleotides degradation III
Jann_0937	PWY-6999	theophylline degradation
Jann_0951	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
Jann_0951	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Jann_0951	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
Jann_0951	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
Jann_0951	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Jann_0951	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Jann_0951	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
Jann_0951	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
Jann_0981	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
Jann_0981	PWY-2161	folate polyglutamylation
Jann_0981	PWY-2201	folate transformations I
Jann_0981	PWY-3841	folate transformations II
Jann_0983	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
Jann_0983	PWY-2201	folate transformations I
Jann_0983	PWY-3841	folate transformations II
Jann_0983	PWY-5030	L-histidine degradation III
Jann_0983	PWY-5497	purine nucleobases degradation II (anaerobic)
Jann_0983	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
Jann_0987	PWY-5101	L-isoleucine biosynthesis II
Jann_0987	PWY-5103	L-isoleucine biosynthesis III
Jann_0987	PWY-5104	L-isoleucine biosynthesis IV
Jann_0987	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Jann_1023	PWY-4981	L-proline biosynthesis II (from arginine)
Jann_1023	PWY-4984	urea cycle
Jann_1023	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Jann_1026	PWY-2201	folate transformations I
Jann_1026	PWY-3841	folate transformations II
Jann_1028	PWY-2301	<i>myo</i>-inositol biosynthesis
Jann_1028	PWY-4702	phytate degradation I
Jann_1028	PWY-6363	D-<i>myo</i>-inositol (1,4,5)-trisphosphate degradation
Jann_1029	PWY-6826	phosphatidylcholine biosynthesis VI
Jann_1032	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Jann_1032	PWY-5723	Rubisco shunt
Jann_1042	PWY-5386	methylglyoxal degradation I
Jann_1047	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Jann_1049	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Jann_1063	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Jann_1063	PWY-5686	UMP biosynthesis
Jann_1063	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Jann_1068	PWY-5381	pyridine nucleotide cycling (plants)
Jann_1068	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
Jann_1068	PWY-6596	adenosine nucleotides degradation I
Jann_1068	PWY-6606	guanosine nucleotides degradation II
Jann_1068	PWY-6607	guanosine nucleotides degradation I
Jann_1068	PWY-6608	guanosine nucleotides degradation III
Jann_1068	PWY-7185	UTP and CTP dephosphorylation I
Jann_1070	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
Jann_1091	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
Jann_1114	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
Jann_1114	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
Jann_1114	PWY-6936	seleno-amino acid biosynthesis
Jann_1114	PWY-702	L-methionine biosynthesis II
Jann_1125	PWY-381	nitrate reduction II (assimilatory)
Jann_1125	PWY-5675	nitrate reduction V (assimilatory)
Jann_1125	PWY-6549	L-glutamine biosynthesis III
Jann_1125	PWY-6963	ammonia assimilation cycle I
Jann_1125	PWY-6964	ammonia assimilation cycle II
Jann_1127	PWY-381	nitrate reduction II (assimilatory)
Jann_1127	PWY-5675	nitrate reduction V (assimilatory)
Jann_1127	PWY-6549	L-glutamine biosynthesis III
Jann_1127	PWY-6963	ammonia assimilation cycle I
Jann_1127	PWY-6964	ammonia assimilation cycle II
Jann_1141	PWY-723	alkylnitronates degradation
Jann_1145	PWY-4381	fatty acid biosynthesis initiation I
Jann_1145	PWY-5743	3-hydroxypropanoate cycle
Jann_1145	PWY-5744	glyoxylate assimilation
Jann_1145	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Jann_1145	PWY-6679	jadomycin biosynthesis
Jann_1145	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Jann_1162	PWY-6832	2-aminoethylphosphonate degradation II
Jann_1163	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Jann_1163	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Jann_1172	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
Jann_1197	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
Jann_1197	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
Jann_1198	PWY-3961	phosphopantothenate biosynthesis II
Jann_1221	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
Jann_1238	PWY-5101	L-isoleucine biosynthesis II
Jann_1238	PWY-5103	L-isoleucine biosynthesis III
Jann_1238	PWY-5104	L-isoleucine biosynthesis IV
Jann_1238	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Jann_1246	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Jann_1246	PWY-5686	UMP biosynthesis
Jann_1246	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Jann_1249	PWY-3781	aerobic respiration I (cytochrome c)
Jann_1249	PWY-4521	arsenite oxidation I (respiratory)
Jann_1249	PWY-6692	Fe(II) oxidation
Jann_1249	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Jann_1250	PWY-3781	aerobic respiration I (cytochrome c)
Jann_1250	PWY-4521	arsenite oxidation I (respiratory)
Jann_1250	PWY-6692	Fe(II) oxidation
Jann_1250	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Jann_1252	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
Jann_1252	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
Jann_1277	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
Jann_1277	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Jann_1277	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
Jann_1277	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
Jann_1277	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
Jann_1277	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
Jann_1278	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
Jann_1278	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
Jann_1304	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
Jann_1337	PWY-5651	L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
Jann_1337	PWY-6309	L-tryptophan degradation XI (mammalian, via kynurenine)
Jann_1361	PWY-6906	chitin derivatives degradation
Jann_1361	PWY-7077	<i>N</i>-acetyl-D-galactosamine degradation
Jann_1361	PWY-7395	D-galactosamine and <i>N</i>-acetyl-D-galactosamine degradation
Jann_1401	PWY-6637	sulfolactate degradation II
Jann_1401	PWY-6643	coenzyme M biosynthesis II
Jann_1418	PWY-6507	4-deoxy-L-<i>threo</i>-hex-4-enopyranuronate degradation
Jann_1429	PWY-6507	4-deoxy-L-<i>threo</i>-hex-4-enopyranuronate degradation
Jann_1446	PWY-381	nitrate reduction II (assimilatory)
Jann_1446	PWY-5675	nitrate reduction V (assimilatory)
Jann_1446	PWY-6549	L-glutamine biosynthesis III
Jann_1446	PWY-6963	ammonia assimilation cycle I
Jann_1446	PWY-6964	ammonia assimilation cycle II
Jann_1447	PWY-5647	2-nitrobenzoate degradation I
Jann_1447	PWY-5651	L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
Jann_1447	PWY-6309	L-tryptophan degradation XI (mammalian, via kynurenine)
Jann_1447	PWY-6505	L-tryptophan degradation XII (Geobacillus)
Jann_1475	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Jann_1475	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Jann_1478	PWY-6167	flavin biosynthesis II (archaea)
Jann_1480	PWY-5250	methanogenesis from trimethylamine
Jann_1486	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Jann_1486	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Jann_1492	PWY-3722	glycine betaine biosynthesis II (Gram-positive bacteria)
Jann_1492	PWY-7494	choline degradation IV
Jann_1493	PWY-3722	glycine betaine biosynthesis II (Gram-positive bacteria)
Jann_1493	PWY-7494	choline degradation IV
Jann_1500	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
Jann_1515	PWY-381	nitrate reduction II (assimilatory)
Jann_1515	PWY-5675	nitrate reduction V (assimilatory)
Jann_1515	PWY-6549	L-glutamine biosynthesis III
Jann_1515	PWY-6963	ammonia assimilation cycle I
Jann_1515	PWY-6964	ammonia assimilation cycle II
Jann_1517	PWY-6938	NADH repair
Jann_1579	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
Jann_1580	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
Jann_1591	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Jann_1591	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Jann_1601	PWY-5250	methanogenesis from trimethylamine
Jann_1602	PWY-7533	gliotoxin biosynthesis
Jann_1624	PWY-4381	fatty acid biosynthesis initiation I
Jann_1624	PWY-6799	fatty acid biosynthesis (plant mitochondria)
Jann_1624	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Jann_1626	PWY-5367	petroselinate biosynthesis
Jann_1626	PWY-5971	palmitate biosynthesis II (bacteria and plants)
Jann_1626	PWY-5973	<i>cis</i>-vaccenate biosynthesis
Jann_1626	PWY-5989	stearate biosynthesis II (bacteria and plants)
Jann_1626	PWY-5994	palmitate biosynthesis I (animals and fungi)
Jann_1626	PWY-6113	superpathway of mycolate biosynthesis
Jann_1626	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
Jann_1626	PWY-6519	8-amino-7-oxononanoate biosynthesis I
Jann_1626	PWY-6951	Jann_1626
Jann_1626	PWY-7053	docosahexaenoate biosynthesis I (lower eukaryotes)
Jann_1626	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Jann_1626	PWYG-321	mycolate biosynthesis
Jann_1648	PWY-6936	seleno-amino acid biosynthesis
Jann_1648	PWY-7274	D-cycloserine biosynthesis
Jann_1653	PWY-5971	palmitate biosynthesis II (bacteria and plants)
Jann_1653	PWY-5973	<i>cis</i>-vaccenate biosynthesis
Jann_1653	PWY-5989	stearate biosynthesis II (bacteria and plants)
Jann_1653	PWY-5994	palmitate biosynthesis I (animals and fungi)
Jann_1653	PWY-6113	superpathway of mycolate biosynthesis
Jann_1653	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
Jann_1653	PWY-6519	8-amino-7-oxononanoate biosynthesis I
Jann_1653	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Jann_1653	PWYG-321	mycolate biosynthesis
Jann_1657	PWY-5971	palmitate biosynthesis II (bacteria and plants)
Jann_1657	PWY-5973	<i>cis</i>-vaccenate biosynthesis
Jann_1657	PWY-5989	stearate biosynthesis II (bacteria and plants)
Jann_1657	PWY-6113	superpathway of mycolate biosynthesis
Jann_1657	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
Jann_1657	PWY-6519	8-amino-7-oxononanoate biosynthesis I
Jann_1657	PWY-7096	triclosan resistance
Jann_1657	PWYG-321	mycolate biosynthesis
Jann_1658	PWY-7425	2-chloroacrylate degradation I
Jann_1662	PWY-6123	inosine-5'-phosphate biosynthesis I
Jann_1662	PWY-6124	inosine-5'-phosphate biosynthesis II
Jann_1662	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Jann_1662	PWY-7234	inosine-5'-phosphate biosynthesis III
Jann_1663	PWY-6185	4-methylcatechol degradation (<i>ortho</i> cleavage)
Jann_1693	PWY-1042	glycolysis IV (plant cytosol)
Jann_1693	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Jann_1693	PWY-5484	glycolysis II (from fructose 6-phosphate)
Jann_1693	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Jann_1693	PWY-7385	1,3-propanediol biosynthesis (engineered)
Jann_1694	PWY-1042	glycolysis IV (plant cytosol)
Jann_1694	PWY-5484	glycolysis II (from fructose 6-phosphate)
Jann_1694	PWY-6886	1-butanol autotrophic biosynthesis
Jann_1694	PWY-6901	superpathway of glucose and xylose degradation
Jann_1694	PWY-7003	glycerol degradation to butanol
Jann_1695	PWY-1042	glycolysis IV (plant cytosol)
Jann_1695	PWY-5484	glycolysis II (from fructose 6-phosphate)
Jann_1695	PWY-6901	superpathway of glucose and xylose degradation
Jann_1695	PWY-7003	glycerol degradation to butanol
Jann_1698	PWY-1042	glycolysis IV (plant cytosol)
Jann_1698	PWY-5484	glycolysis II (from fructose 6-phosphate)
Jann_1698	PWY-6901	superpathway of glucose and xylose degradation
Jann_1698	PWY-7003	glycerol degradation to butanol
Jann_1700	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Jann_1700	PWY-5723	Rubisco shunt
Jann_1700	PWY-6891	thiazole biosynthesis II (Bacillus)
Jann_1700	PWY-6892	thiazole biosynthesis I (E. coli)
Jann_1700	PWY-6901	superpathway of glucose and xylose degradation
Jann_1700	PWY-7560	methylerythritol phosphate pathway II
Jann_1707	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Jann_1707	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
Jann_1707	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
Jann_1707	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
Jann_1717	PWY-6700	queuosine biosynthesis
Jann_1720	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
Jann_1720	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
Jann_1733	PWY-1042	glycolysis IV (plant cytosol)
Jann_1733	PWY-5484	glycolysis II (from fructose 6-phosphate)
Jann_1733	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Jann_1733	PWY-7003	glycerol degradation to butanol
Jann_1739	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
Jann_1741	PWY-5686	UMP biosynthesis
Jann_1742	PWY-5686	UMP biosynthesis
Jann_1745	PWY-5704	urea degradation II
Jann_1747	PWY-5704	urea degradation II
Jann_1749	PWY-5651	L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
Jann_1749	PWY-6309	L-tryptophan degradation XI (mammalian, via kynurenine)
Jann_1752	PWY-5704	urea degradation II
Jann_1773	PWY-6683	sulfate reduction III (assimilatory)
Jann_1775	PWY-5194	siroheme biosynthesis
Jann_1775	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
Jann_1781	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
Jann_1784	PWY-4381	fatty acid biosynthesis initiation I
Jann_1797	PWY-1042	glycolysis IV (plant cytosol)
Jann_1797	PWY-1622	formaldehyde assimilation I (serine pathway)
Jann_1797	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
Jann_1797	PWY-5484	glycolysis II (from fructose 6-phosphate)
Jann_1797	PWY-5723	Rubisco shunt
Jann_1797	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Jann_1797	PWY-6886	1-butanol autotrophic biosynthesis
Jann_1797	PWY-6901	superpathway of glucose and xylose degradation
Jann_1797	PWY-7003	glycerol degradation to butanol
Jann_1797	PWY-7124	ethylene biosynthesis V (engineered)
Jann_1797	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
Jann_1815	PWY-5988	wound-induced proteolysis I
Jann_1815	PWY-6018	seed germination protein turnover
Jann_1822	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
Jann_1822	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
Jann_1822	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Jann_1822	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
Jann_1822	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
Jann_1822	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
Jann_1822	PWY-7205	CMP phosphorylation
Jann_1822	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
Jann_1822	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Jann_1822	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
Jann_1822	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Jann_1822	PWY-7224	purine deoxyribonucleosides salvage
Jann_1822	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
Jann_1822	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
Jann_1830	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Jann_1830	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Jann_1836	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Jann_1836	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
Jann_1836	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
Jann_1837	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Jann_1837	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
Jann_1842	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Jann_1845	PWY-6728	methylaspartate cycle
Jann_1845	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Jann_1845	PWY-7118	chitin degradation to ethanol
Jann_1845	PWY-7294	xylose degradation IV
Jann_1845	PWY-7295	L-arabinose degradation IV
Jann_1857	PWY-5663	tetrahydrobiopterin biosynthesis I
Jann_1857	PWY-5664	tetrahydrobiopterin biosynthesis II
Jann_1857	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
Jann_1857	PWY-6703	preQ<sub>0</sub> biosynthesis
Jann_1857	PWY-6983	tetrahydrobiopterin biosynthesis III
Jann_1857	PWY-7442	drosopterin and aurodrosopterin biosynthesis
Jann_1875	PWY-6823	molybdenum cofactor biosynthesis
Jann_1880	PWY-5958	acridone alkaloid biosynthesis
Jann_1880	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
Jann_1880	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
Jann_1882	PWY-5958	acridone alkaloid biosynthesis
Jann_1882	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
Jann_1882	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
Jann_1893	PWY-5101	L-isoleucine biosynthesis II
Jann_1893	PWY-5103	L-isoleucine biosynthesis III
Jann_1893	PWY-5104	L-isoleucine biosynthesis IV
Jann_1893	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
Jann_1893	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
Jann_1893	PWY-6389	(<i>S</i>)-acetoin biosynthesis
Jann_1893	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Jann_1897	PWY-5101	L-isoleucine biosynthesis II
Jann_1897	PWY-5103	L-isoleucine biosynthesis III
Jann_1897	PWY-5104	L-isoleucine biosynthesis IV
Jann_1897	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
Jann_1897	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
Jann_1897	PWY-6389	(<i>S</i>)-acetoin biosynthesis
Jann_1897	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Jann_1911	PWY-6840	homoglutathione biosynthesis
Jann_1911	PWY-7255	ergothioneine biosynthesis I (bacteria)
Jann_1913	PWY-5642	2,4-dinitrotoluene degradation
Jann_1913	PWY-6373	acrylate degradation
Jann_1933	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
Jann_1933	PWY-7536	2-amino-3-hydroxycyclopent-2-enone biosynthesis
Jann_1935	PWY-7560	methylerythritol phosphate pathway II
Jann_1937	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Jann_1937	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Jann_1943	PWY-2723	trehalose degradation V
Jann_1943	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
Jann_1943	PWY-5661	GDP-glucose biosynthesis
Jann_1943	PWY-7238	sucrose biosynthesis II
Jann_1943	PWY-7385	1,3-propanediol biosynthesis (engineered)
Jann_1944	PWY-3121	linamarin degradation
Jann_1944	PWY-5176	coumarin biosynthesis (via 2-coumarate)
Jann_1944	PWY-6002	lotaustralin degradation
Jann_1944	PWY-6788	cellulose degradation II (fungi)
Jann_1944	PWY-7089	taxiphyllin bioactivation
Jann_1944	PWY-7091	linustatin bioactivation
Jann_1944	PWY-7092	neolinustatin bioactivation
Jann_1953	PWY-5101	L-isoleucine biosynthesis II
Jann_1953	PWY-5103	L-isoleucine biosynthesis III
Jann_1953	PWY-5104	L-isoleucine biosynthesis IV
Jann_1953	PWY-5350	thiosulfate disproportionation III (rhodanese)
Jann_1953	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Jann_1954	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
Jann_1954	PWY-6507	4-deoxy-L-<i>threo</i>-hex-4-enopyranuronate degradation
Jann_1954	PWY-7242	D-fructuronate degradation
Jann_1954	PWY-7310	D-glucosaminate degradation
Jann_1959	PWY-5101	L-isoleucine biosynthesis II
Jann_1959	PWY-6871	3-methylbutanol biosynthesis
Jann_1967	PWY-40	putrescine biosynthesis I
Jann_1967	PWY-6305	putrescine biosynthesis IV
Jann_1969	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
Jann_1970	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
Jann_1970	PWY-6855	chitin degradation I (archaea)
Jann_1970	PWY-6906	chitin derivatives degradation
Jann_1971	PWY-3801	sucrose degradation II (sucrose synthase)
Jann_1971	PWY-5054	sorbitol biosynthesis I
Jann_1971	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
Jann_1971	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
Jann_1971	PWY-5659	GDP-mannose biosynthesis
Jann_1971	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Jann_1971	PWY-621	sucrose degradation III (sucrose invertase)
Jann_1971	PWY-622	starch biosynthesis
Jann_1971	PWY-6531	mannitol cycle
Jann_1971	PWY-6981	chitin biosynthesis
Jann_1971	PWY-7238	sucrose biosynthesis II
Jann_1971	PWY-7347	sucrose biosynthesis III
Jann_1971	PWY-7385	1,3-propanediol biosynthesis (engineered)
Jann_1973	PWY-181	photorespiration
Jann_1982	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
Jann_1982	PWY-6596	adenosine nucleotides degradation I
Jann_1982	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
Jann_2019	PWY-5386	methylglyoxal degradation I
Jann_2038	PWY-5651	L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
Jann_2038	PWY-6309	L-tryptophan degradation XI (mammalian, via kynurenine)
Jann_2079	PWY-1622	formaldehyde assimilation I (serine pathway)
Jann_2079	PWY-181	photorespiration
Jann_2079	PWY-2161	folate polyglutamylation
Jann_2079	PWY-2201	folate transformations I
Jann_2079	PWY-3661	glycine betaine degradation I
Jann_2079	PWY-3661-1	glycine betaine degradation II (mammalian)
Jann_2079	PWY-3841	folate transformations II
Jann_2079	PWY-5497	purine nucleobases degradation II (anaerobic)
Jann_2085	PWY-5651	L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
Jann_2085	PWY-6309	L-tryptophan degradation XI (mammalian, via kynurenine)
Jann_2095	PWY-5372	carbon tetrachloride degradation II
Jann_2095	PWY-6780	hydrogen production VI
Jann_2102	PWY-4202	arsenate detoxification I (glutaredoxin)
Jann_2102	PWY-4621	arsenate detoxification II (glutaredoxin)
Jann_2114	PWY-4261	glycerol degradation I
Jann_2173	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Jann_2173	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
Jann_2173	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
Jann_2183	PWY-3661	glycine betaine degradation I
Jann_2183	PWY-4722	creatinine degradation II
Jann_2185	PWY-3661	glycine betaine degradation I
Jann_2185	PWY-4722	creatinine degradation II
Jann_2186	PWY-3661	glycine betaine degradation I
Jann_2186	PWY-4722	creatinine degradation II
Jann_2187	PWY-3661	glycine betaine degradation I
Jann_2187	PWY-4722	creatinine degradation II
Jann_2189	PWY-6854	ethylene biosynthesis III (microbes)
Jann_2221	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
Jann_2223	PWY-5250	methanogenesis from trimethylamine
Jann_2226	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
Jann_2226	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
Jann_2226	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
Jann_2230	PWY-6599	guanine and guanosine salvage II
Jann_2230	PWY-6609	adenine and adenosine salvage III
Jann_2230	PWY-6610	adenine and adenosine salvage IV
Jann_2230	PWY-6620	guanine and guanosine salvage
Jann_2234	PWY-5269	cardiolipin biosynthesis II
Jann_2234	PWY-5668	cardiolipin biosynthesis I
Jann_2235	PWY-7560	methylerythritol phosphate pathway II
Jann_2300	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Jann_2300	PWY-6416	quinate degradation II
Jann_2300	PWY-6707	gallate biosynthesis
Jann_2308	PWY-6019	pseudouridine degradation
Jann_2321	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
Jann_2324	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Jann_2324	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
Jann_2336	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Jann_2336	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Jann_2338	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Jann_2338	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Jann_2340	PWY-40	putrescine biosynthesis I
Jann_2340	PWY-6305	putrescine biosynthesis IV
Jann_2355	PWY-6823	molybdenum cofactor biosynthesis
Jann_2355	PWY-6891	thiazole biosynthesis II (Bacillus)
Jann_2355	PWY-6892	thiazole biosynthesis I (E. coli)
Jann_2355	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
Jann_2365	PWY-6823	molybdenum cofactor biosynthesis
Jann_2365	PWY-6891	thiazole biosynthesis II (Bacillus)
Jann_2365	PWY-6892	thiazole biosynthesis I (E. coli)
Jann_2365	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
Jann_2371	PWY-5913	TCA cycle VI (obligate autotrophs)
Jann_2371	PWY-6549	L-glutamine biosynthesis III
Jann_2371	PWY-6728	methylaspartate cycle
Jann_2371	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Jann_2371	PWY-7124	ethylene biosynthesis V (engineered)
Jann_2371	PWY-7254	TCA cycle VII (acetate-producers)
Jann_2371	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
Jann_2372	PWY-5913	TCA cycle VI (obligate autotrophs)
Jann_2372	PWY-6549	L-glutamine biosynthesis III
Jann_2372	PWY-6728	methylaspartate cycle
Jann_2372	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Jann_2372	PWY-7124	ethylene biosynthesis V (engineered)
Jann_2372	PWY-7254	TCA cycle VII (acetate-producers)
Jann_2372	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
Jann_2394	PWY-5392	reductive TCA cycle II
Jann_2394	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
Jann_2394	PWY-5690	TCA cycle II (plants and fungi)
Jann_2394	PWY-5913	TCA cycle VI (obligate autotrophs)
Jann_2394	PWY-6728	methylaspartate cycle
Jann_2394	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Jann_2394	PWY-7254	TCA cycle VII (acetate-producers)
Jann_2394	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Jann_2407	PWY-4261	glycerol degradation I
Jann_2428	PWY-6834	spermidine biosynthesis III
Jann_2434	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
Jann_2434	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
Jann_2434	PWY-6897	thiamin salvage II
Jann_2434	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
Jann_2434	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
Jann_2434	PWY-7353	4-methyl-5(&beta;-hydroxyethyl)thiazole salvage (yeast)
Jann_2434	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
Jann_2440	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
Jann_2443	PWY-6164	3-dehydroquinate biosynthesis I
Jann_2451	PWY-5971	palmitate biosynthesis II (bacteria and plants)
Jann_2451	PWY-5973	<i>cis</i>-vaccenate biosynthesis
Jann_2451	PWY-5989	stearate biosynthesis II (bacteria and plants)
Jann_2451	PWY-5994	palmitate biosynthesis I (animals and fungi)
Jann_2451	PWY-6113	superpathway of mycolate biosynthesis
Jann_2451	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
Jann_2451	PWY-6519	8-amino-7-oxononanoate biosynthesis I
Jann_2451	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Jann_2451	PWYG-321	mycolate biosynthesis
Jann_2455	PWY-7560	methylerythritol phosphate pathway II
Jann_2461	PWY-2781	<i>cis</i>-zeatin biosynthesis
Jann_2472	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
Jann_2472	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Jann_2472	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
Jann_2472	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
Jann_2472	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Jann_2472	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Jann_2472	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
Jann_2472	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
Jann_2475	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
Jann_2475	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
Jann_2476	PWY-5971	palmitate biosynthesis II (bacteria and plants)
Jann_2476	PWY-5973	<i>cis</i>-vaccenate biosynthesis
Jann_2476	PWY-5989	stearate biosynthesis II (bacteria and plants)
Jann_2476	PWY-6113	superpathway of mycolate biosynthesis
Jann_2476	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
Jann_2476	PWY-6519	8-amino-7-oxononanoate biosynthesis I
Jann_2476	PWY-7096	triclosan resistance
Jann_2476	PWYG-321	mycolate biosynthesis
Jann_2486	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Jann_2487	PWY-6164	3-dehydroquinate biosynthesis I
Jann_2520	PWY-6700	queuosine biosynthesis
Jann_2532	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
Jann_2543	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Jann_2543	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
Jann_2543	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
Jann_2544	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Jann_2544	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
Jann_2544	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
Jann_2545	PWY-6123	inosine-5'-phosphate biosynthesis I
Jann_2545	PWY-6124	inosine-5'-phosphate biosynthesis II
Jann_2545	PWY-7234	inosine-5'-phosphate biosynthesis III
Jann_2558	PWY-1881	formate oxidation to CO<sub>2</sub>
Jann_2558	PWY-5497	purine nucleobases degradation II (anaerobic)
Jann_2558	PWY-6696	oxalate degradation III
Jann_2584	PWY-4983	L-citrulline-nitric oxide cycle
Jann_2584	PWY-4984	urea cycle
Jann_2584	PWY-5	canavanine biosynthesis
Jann_2584	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Jann_2584	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Jann_2601	PWY-5692	allantoin degradation to glyoxylate II
Jann_2601	PWY-5698	allantoin degradation to ureidoglycolate II (ammonia producing)
Jann_2602	PWY-6832	2-aminoethylphosphonate degradation II
Jann_2604	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
Jann_2607	PWY-5694	allantoin degradation to glyoxylate I
Jann_2607	PWY-5705	allantoin degradation to glyoxylate III
Jann_2608	PWY-5691	urate degradation to allantoin I
Jann_2608	PWY-7394	urate degradation to allantoin II
Jann_2609	PWY-5691	urate degradation to allantoin I
Jann_2609	PWY-7394	urate degradation to allantoin II
Jann_2637	PWY-4041	&gamma;-glutamyl cycle
Jann_2637	PWY-5826	hypoglycin biosynthesis
Jann_2645	PWY-6825	phosphatidylcholine biosynthesis V
Jann_2663	PWY-6123	inosine-5'-phosphate biosynthesis I
Jann_2663	PWY-6124	inosine-5'-phosphate biosynthesis II
Jann_2663	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Jann_2663	PWY-7234	inosine-5'-phosphate biosynthesis III
Jann_2721	PWY-5344	L-homocysteine biosynthesis
Jann_2721	PWY-7174	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation II
Jann_2724	PWY-5497	purine nucleobases degradation II (anaerobic)
Jann_2724	PWY-6606	guanosine nucleotides degradation II
Jann_2724	PWY-6608	guanosine nucleotides degradation III
Jann_2724	PWY-7442	drosopterin and aurodrosopterin biosynthesis
Jann_2725	PWY-6749	CMP-legionaminate biosynthesis I
Jann_2726	PWY-6614	tetrahydrofolate biosynthesis
Jann_2728	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
Jann_2728	PWY-6148	tetrahydromethanopterin biosynthesis
Jann_2728	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
Jann_2728	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
Jann_2730	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
Jann_2730	PWY-6549	L-glutamine biosynthesis III
Jann_2730	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
Jann_2730	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
Jann_2735	PWY-7376	cob(II)yrinate <i>a,c</i>-diamide biosynthesis II (late cobalt incorporation)
Jann_2742	PWY-7376	cob(II)yrinate <i>a,c</i>-diamide biosynthesis II (late cobalt incorporation)
Jann_2753	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Jann_2753	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Jann_2754	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Jann_2754	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Jann_2759	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Jann_2759	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Jann_2760	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
Jann_2760	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
Jann_2760	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
Jann_2760	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
Jann_2763	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Jann_2763	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Jann_2764	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
Jann_2764	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
Jann_2764	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
Jann_2765	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Jann_2765	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Jann_2781	PWY-5750	itaconate biosynthesis
Jann_2781	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Jann_2781	PWY-6146	<i>Methanobacterium thermoautotrophicum</i> biosynthetic metabolism
Jann_2812	PWY-723	alkylnitronates degradation
Jann_2831	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Jann_2831	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Jann_2846	PWY-1281	sulfoacetaldehyde degradation I
Jann_2846	PWY-6637	sulfolactate degradation II
Jann_2847	PWY-1281	sulfoacetaldehyde degradation I
Jann_2847	PWY-5482	pyruvate fermentation to acetate II
Jann_2847	PWY-5485	pyruvate fermentation to acetate IV
Jann_2847	PWY-5497	purine nucleobases degradation II (anaerobic)
Jann_2847	PWY-6637	sulfolactate degradation II
Jann_2853	PWY-7399	methylphosphonate degradation II
Jann_2854	PWY-5532	adenosine nucleotides degradation IV
Jann_2855	PWY-5532	adenosine nucleotides degradation IV
Jann_2886	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Jann_2886	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Jann_2918	PWY-381	nitrate reduction II (assimilatory)
Jann_2918	PWY-5675	nitrate reduction V (assimilatory)
Jann_2918	PWY-6549	L-glutamine biosynthesis III
Jann_2918	PWY-6963	ammonia assimilation cycle I
Jann_2918	PWY-6964	ammonia assimilation cycle II
Jann_2920	PWY-7376	cob(II)yrinate <i>a,c</i>-diamide biosynthesis II (late cobalt incorporation)
Jann_2921	PWY-5194	siroheme biosynthesis
Jann_2921	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
Jann_2923	PWY-5194	siroheme biosynthesis
Jann_2923	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
Jann_2925	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
Jann_2930	PWY-6683	sulfate reduction III (assimilatory)
Jann_2935	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
Jann_2935	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
Jann_2935	PWY-6268	adenosylcobalamin salvage from cobalamin
Jann_2935	PWY-6269	adenosylcobalamin salvage from cobinamide II
Jann_2952	PWY-5651	L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
Jann_2952	PWY-6309	L-tryptophan degradation XI (mammalian, via kynurenine)
Jann_2963	PWY-5686	UMP biosynthesis
Jann_2964	PWY-4202	arsenate detoxification I (glutaredoxin)
Jann_2964	PWY-4621	arsenate detoxification II (glutaredoxin)
Jann_2977	PWY-1361	benzoyl-CoA degradation I (aerobic)
Jann_2977	PWY-5109	2-methylbutanoate biosynthesis
Jann_2977	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
Jann_2977	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
Jann_2977	PWY-5177	glutaryl-CoA degradation
Jann_2977	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Jann_2977	PWY-6435	4-hydroxybenzoate biosynthesis V
Jann_2977	PWY-6583	pyruvate fermentation to butanol I
Jann_2977	PWY-6863	pyruvate fermentation to hexanol
Jann_2977	PWY-6883	pyruvate fermentation to butanol II
Jann_2977	PWY-6944	androstenedione degradation
Jann_2977	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
Jann_2977	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
Jann_2977	PWY-7007	methyl ketone biosynthesis
Jann_2977	PWY-7046	4-coumarate degradation (anaerobic)
Jann_2977	PWY-7094	fatty acid salvage
Jann_2977	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
Jann_2977	PWY-735	jasmonic acid biosynthesis
Jann_2977	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
Jann_2983	PWY-7183	pyrimidine nucleobases salvage I
Jann_2985	PWY-7180	2'-deoxy-&alpha;-D-ribose 1-phosphate degradation
Jann_2986	PWY-7181	pyrimidine deoxyribonucleosides degradation
Jann_2987	PWY-6556	pyrimidine ribonucleosides salvage II
Jann_2987	PWY-7181	pyrimidine deoxyribonucleosides degradation
Jann_2987	PWY-7193	pyrimidine ribonucleosides salvage I
Jann_2987	PWY-7199	pyrimidine deoxyribonucleosides salvage
Jann_2989	PWY-1281	sulfoacetaldehyde degradation I
Jann_2989	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
Jann_2989	PWY-5482	pyruvate fermentation to acetate II
Jann_2989	PWY-5485	pyruvate fermentation to acetate IV
Jann_2989	PWY-5497	purine nucleobases degradation II (anaerobic)
Jann_2989	PWY-6637	sulfolactate degradation II
Jann_2989	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
Jann_2990	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
Jann_2990	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
Jann_2990	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
Jann_2991	PWY-1622	formaldehyde assimilation I (serine pathway)
Jann_2991	PWY-181	photorespiration
Jann_2991	PWY-2161	folate polyglutamylation
Jann_2991	PWY-2201	folate transformations I
Jann_2991	PWY-3661	glycine betaine degradation I
Jann_2991	PWY-3661-1	glycine betaine degradation II (mammalian)
Jann_2991	PWY-3841	folate transformations II
Jann_2991	PWY-5497	purine nucleobases degradation II (anaerobic)
Jann_3000	PWY-5484	glycolysis II (from fructose 6-phosphate)
Jann_3043	PWY-6683	sulfate reduction III (assimilatory)
Jann_3047	PWY-5194	siroheme biosynthesis
Jann_3047	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
Jann_3063	PWY-5532	adenosine nucleotides degradation IV
Jann_3063	PWY-5723	Rubisco shunt
Jann_3113	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
Jann_3113	PWY-622	starch biosynthesis
Jann_3114	PWY-622	starch biosynthesis
Jann_3115	PWY-622	starch biosynthesis
Jann_3117	PWY-6749	CMP-legionaminate biosynthesis I
Jann_3118	PWY-5941	glycogen degradation II (eukaryotic)
Jann_3118	PWY-622	starch biosynthesis
Jann_3118	PWY-6731	starch degradation III
Jann_3118	PWY-6737	starch degradation V
Jann_3118	PWY-7238	sucrose biosynthesis II
Jann_3128	PWY-5250	methanogenesis from trimethylamine
Jann_3146	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Jann_3146	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Jann_3164	PWY-5743	3-hydroxypropanoate cycle
Jann_3164	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Jann_3164	PWY-6728	methylaspartate cycle
Jann_3164	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Jann_3175	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Jann_3175	PWY-5723	Rubisco shunt
Jann_3176	PWY-6898	thiamin salvage III
Jann_3176	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
Jann_3176	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
Jann_3179	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Jann_3181	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
Jann_3181	PWY-7177	UTP and CTP dephosphorylation II
Jann_3181	PWY-7185	UTP and CTP dephosphorylation I
Jann_3185	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
Jann_3186	PWY-6749	CMP-legionaminate biosynthesis I
Jann_3191	PWY-2941	L-lysine biosynthesis II
Jann_3191	PWY-2942	L-lysine biosynthesis III
Jann_3191	PWY-5097	L-lysine biosynthesis VI
Jann_3191	PWY-6559	spermidine biosynthesis II
Jann_3191	PWY-6562	norspermidine biosynthesis
Jann_3191	PWY-7153	grixazone biosynthesis
Jann_3212	PWY-6605	adenine and adenosine salvage II
Jann_3212	PWY-6610	adenine and adenosine salvage IV
Jann_3233	PWY-6610	adenine and adenosine salvage IV
Jann_3259	PWY-4261	glycerol degradation I
Jann_3287	PWY-6823	molybdenum cofactor biosynthesis
Jann_3291	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Jann_3302	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Jann_3302	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
Jann_3302	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
Jann_3305	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
Jann_3305	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
Jann_3305	PWY-6269	adenosylcobalamin salvage from cobinamide II
Jann_3306	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
Jann_3306	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
Jann_3306	PWY-6269	adenosylcobalamin salvage from cobinamide II
Jann_3320	PWY-4381	fatty acid biosynthesis initiation I
Jann_3324	PWY-7199	pyrimidine deoxyribonucleosides salvage
Jann_3328	PWY-3341	L-proline biosynthesis III
Jann_3328	PWY-4981	L-proline biosynthesis II (from arginine)
Jann_3328	PWY-6344	L-ornithine degradation II (Stickland reaction)
Jann_3340	PWY-5278	sulfite oxidation III
Jann_3340	PWY-5340	sulfate activation for sulfonation
Jann_3340	PWY-6683	sulfate reduction III (assimilatory)
Jann_3340	PWY-6932	selenate reduction
Jann_3352	PWY-6123	inosine-5'-phosphate biosynthesis I
Jann_3352	PWY-7234	inosine-5'-phosphate biosynthesis III
Jann_3357	PWY-7399	methylphosphonate degradation II
Jann_3365	PWY-5523	5,6-dimethylbenzimidazole biosynthesis
Jann_3365	PWY-6167	flavin biosynthesis II (archaea)
Jann_3365	PWY-6168	flavin biosynthesis III (fungi)
Jann_3367	PWY-5743	3-hydroxypropanoate cycle
Jann_3367	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Jann_3367	PWY-6728	methylaspartate cycle
Jann_3367	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Jann_3374	PWY-4381	fatty acid biosynthesis initiation I
Jann_3374	PWY-5743	3-hydroxypropanoate cycle
Jann_3374	PWY-5744	glyoxylate assimilation
Jann_3374	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Jann_3374	PWY-6679	jadomycin biosynthesis
Jann_3374	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Jann_3395	PWY-7533	gliotoxin biosynthesis
Jann_3413	PWY-6167	flavin biosynthesis II (archaea)
Jann_3413	PWY-6168	flavin biosynthesis III (fungi)
Jann_3414	PWY-6167	flavin biosynthesis II (archaea)
Jann_3414	PWY-6168	flavin biosynthesis III (fungi)
Jann_3414	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
Jann_3417	PWY-6167	flavin biosynthesis II (archaea)
Jann_3417	PWY-6168	flavin biosynthesis III (fungi)
Jann_3417	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Jann_3445	PWY-3661	glycine betaine degradation I
Jann_3445	PWY-4722	creatinine degradation II
Jann_3446	PWY-3661	glycine betaine degradation I
Jann_3446	PWY-4722	creatinine degradation II
Jann_3447	PWY-3661	glycine betaine degradation I
Jann_3447	PWY-4722	creatinine degradation II
Jann_3448	PWY-3661	glycine betaine degradation I
Jann_3448	PWY-4722	creatinine degradation II
Jann_3461	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
Jann_3472	PWY-6832	2-aminoethylphosphonate degradation II
Jann_3494	PWY-5737	(5<i>R</i>)-carbapenem carboxylate biosynthesis
Jann_3494	PWY-6853	ethylene biosynthesis II (microbes)
Jann_3494	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
Jann_3502	PWY-5386	methylglyoxal degradation I
Jann_3557	PWY-6891	thiazole biosynthesis II (Bacillus)
Jann_3557	PWY-6892	thiazole biosynthesis I (E. coli)
Jann_3557	PWY-7560	methylerythritol phosphate pathway II
Jann_3617	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Jann_3629	PWY-5381	pyridine nucleotide cycling (plants)
Jann_3629	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
Jann_3631	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
Jann_3631	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
Jann_3636	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Jann_3643	PWY-6871	3-methylbutanol biosynthesis
Jann_3658	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
Jann_3658	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
Jann_3680	PWY-3722	glycine betaine biosynthesis II (Gram-positive bacteria)
Jann_3680	PWY-7494	choline degradation IV
Jann_3683	PWY-4261	glycerol degradation I
Jann_3684	PWY-4261	glycerol degradation I
Jann_3684	PWY-6118	glycerol-3-phosphate shuttle
Jann_3684	PWY-6952	glycerophosphodiester degradation
Jann_3703	PWY-6672	<i>cis</i>-genanyl-CoA degradation
Jann_3703	PWY-7118	chitin degradation to ethanol
Jann_3730	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
Jann_3730	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
Jann_3734	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
Jann_3734	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
Jann_3746	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
Jann_3773	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Jann_3773	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Jann_3823	PWY-5392	reductive TCA cycle II
Jann_3823	PWY-5537	pyruvate fermentation to acetate V
Jann_3823	PWY-5538	pyruvate fermentation to acetate VI
Jann_3823	PWY-5690	TCA cycle II (plants and fungi)
Jann_3823	PWY-5913	TCA cycle VI (obligate autotrophs)
Jann_3823	PWY-6728	methylaspartate cycle
Jann_3823	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Jann_3823	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Jann_3827	PWY-1361	benzoyl-CoA degradation I (aerobic)
Jann_3827	PWY-3602	L-carnitine degradation II
Jann_3827	PWY-5109	2-methylbutanoate biosynthesis
Jann_3827	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
Jann_3827	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
Jann_3827	PWY-5177	glutaryl-CoA degradation
Jann_3827	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Jann_3827	PWY-6435	4-hydroxybenzoate biosynthesis V
Jann_3827	PWY-6583	pyruvate fermentation to butanol I
Jann_3827	PWY-6863	pyruvate fermentation to hexanol
Jann_3827	PWY-6883	pyruvate fermentation to butanol II
Jann_3827	PWY-6944	androstenedione degradation
Jann_3827	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
Jann_3827	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
Jann_3827	PWY-7007	methyl ketone biosynthesis
Jann_3827	PWY-7046	4-coumarate degradation (anaerobic)
Jann_3827	PWY-7094	fatty acid salvage
Jann_3827	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
Jann_3827	PWY-735	jasmonic acid biosynthesis
Jann_3827	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
Jann_3827	PWY-7472	D-carnitine degradation II
Jann_3830	PWY-6807	xyloglucan degradation II (exoglucanase)
Jann_3832	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
Jann_3832	PWY-6507	4-deoxy-L-<i>threo</i>-hex-4-enopyranuronate degradation
Jann_3832	PWY-7242	D-fructuronate degradation
Jann_3832	PWY-7310	D-glucosaminate degradation
Jann_3833	PWY-7130	L-glucose degradation
Jann_3835	PWY-6527	stachyose degradation
Jann_3841	PWY-3221	dTDP-L-rhamnose biosynthesis II
Jann_3841	PWY-6808	dTDP-D-forosamine biosynthesis
Jann_3841	PWY-6942	dTDP-D-desosamine biosynthesis
Jann_3841	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
Jann_3841	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
Jann_3841	PWY-6974	dTDP-L-olivose biosynthesis
Jann_3841	PWY-6976	dTDP-L-mycarose biosynthesis
Jann_3841	PWY-7104	dTDP-L-megosamine biosynthesis
Jann_3841	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
Jann_3841	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
Jann_3841	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
Jann_3841	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
Jann_3841	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
Jann_3841	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
Jann_3841	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
Jann_3841	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
Jann_3843	PWY-3221	dTDP-L-rhamnose biosynthesis II
Jann_3843	PWY-6808	dTDP-D-forosamine biosynthesis
Jann_3843	PWY-6942	dTDP-D-desosamine biosynthesis
Jann_3843	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
Jann_3843	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
Jann_3843	PWY-6974	dTDP-L-olivose biosynthesis
Jann_3843	PWY-6976	dTDP-L-mycarose biosynthesis
Jann_3843	PWY-7104	dTDP-L-megosamine biosynthesis
Jann_3843	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
Jann_3843	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
Jann_3843	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
Jann_3843	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
Jann_3843	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
Jann_3843	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
Jann_3843	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
Jann_3843	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
Jann_3845	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Jann_3845	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
Jann_3846	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
Jann_3846	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
Jann_3848	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
Jann_3848	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
Jann_3856	PWY-3781	aerobic respiration I (cytochrome c)
Jann_3856	PWY-4521	arsenite oxidation I (respiratory)
Jann_3856	PWY-6692	Fe(II) oxidation
Jann_3856	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Jann_3857	PWY-3781	aerobic respiration I (cytochrome c)
Jann_3857	PWY-4521	arsenite oxidation I (respiratory)
Jann_3857	PWY-6692	Fe(II) oxidation
Jann_3857	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Jann_3865	PWY-7432	L-phenylalanine biosynthesis III (cytosolic, plants)
Jann_3868	PWY-5381	pyridine nucleotide cycling (plants)
Jann_3902	PWY-5686	UMP biosynthesis
Jann_3905	PWY-5686	UMP biosynthesis
Jann_3909	PWY-6840	homoglutathione biosynthesis
Jann_3909	PWY-7255	ergothioneine biosynthesis I (bacteria)
Jann_3916	PWY-6823	molybdenum cofactor biosynthesis
Jann_3918	PWY-5269	cardiolipin biosynthesis II
Jann_3918	PWY-5668	cardiolipin biosynthesis I
Jann_3929	PWY-3722	glycine betaine biosynthesis II (Gram-positive bacteria)
Jann_3929	PWY-7494	choline degradation IV
Jann_3966	PWY-3781	aerobic respiration I (cytochrome c)
Jann_3966	PWY-4302	aerobic respiration III (alternative oxidase pathway)
Jann_3966	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
Jann_3966	PWY-5690	TCA cycle II (plants and fungi)
Jann_3966	PWY-6728	methylaspartate cycle
Jann_3966	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Jann_3966	PWY-7254	TCA cycle VII (acetate-producers)
Jann_3966	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Jann_3976	PWY-723	alkylnitronates degradation
Jann_3977	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
Jann_3989	PWY-5686	UMP biosynthesis
Jann_4037	PWY-2941	L-lysine biosynthesis II
Jann_4037	PWY-2942	L-lysine biosynthesis III
Jann_4037	PWY-5097	L-lysine biosynthesis VI
Jann_4042	PWY-6123	inosine-5'-phosphate biosynthesis I
Jann_4042	PWY-6124	inosine-5'-phosphate biosynthesis II
Jann_4042	PWY-7234	inosine-5'-phosphate biosynthesis III
Jann_4054	PWY-4041	&gamma;-glutamyl cycle
Jann_4054	PWY-5826	hypoglycin biosynthesis
Jann_4074	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
Jann_4079	PWY-5667	CDP-diacylglycerol biosynthesis I
Jann_4079	PWY-5981	CDP-diacylglycerol biosynthesis III
Jann_4081	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Jann_4081	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
Jann_4115	PWY-5694	allantoin degradation to glyoxylate I
Jann_4115	PWY-5705	allantoin degradation to glyoxylate III
Jann_4161	PWY-6215	4-chlorobenzoate degradation
Jann_4199	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Jann_4209	PWY-5839	menaquinol-7 biosynthesis
Jann_4209	PWY-5844	menaquinol-9 biosynthesis
Jann_4209	PWY-5849	menaquinol-6 biosynthesis
Jann_4209	PWY-5890	menaquinol-10 biosynthesis
Jann_4209	PWY-5891	menaquinol-11 biosynthesis
Jann_4209	PWY-5892	menaquinol-12 biosynthesis
Jann_4209	PWY-5895	menaquinol-13 biosynthesis