MS0006	PWY-2941	L-lysine biosynthesis II
MS0006	PWY-2942	L-lysine biosynthesis III
MS0006	PWY-5097	L-lysine biosynthesis VI
MS0006	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
MS0006	PWY-6559	spermidine biosynthesis II
MS0006	PWY-6562	norspermidine biosynthesis
MS0006	PWY-7153	grixazone biosynthesis
MS0006	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
MS0014	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
MS0014	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
MS0015	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
MS0015	PWY-6855	chitin degradation I (archaea)
MS0015	PWY-6906	chitin derivatives degradation
MS0016	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
MS0020	PWY-5686	UMP biosynthesis
MS0022	PWY-7310	D-glucosaminate degradation
MS0028	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
MS0028	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
MS0038	PWY-6339	syringate degradation
MS0040	PWY-6339	syringate degradation
MS0045	PWY-5101	L-isoleucine biosynthesis II
MS0045	PWY-5103	L-isoleucine biosynthesis III
MS0045	PWY-5104	L-isoleucine biosynthesis IV
MS0045	PWY-7111	pyruvate fermentation to isobutanol (engineered)
MS0046	PWY-6961	L-ascorbate degradation II (bacterial, aerobic)
MS0047	PWY-6961	L-ascorbate degradation II (bacterial, aerobic)
MS0048	PWY-4261	glycerol degradation I
MS0054	PWY-6961	L-ascorbate degradation II (bacterial, aerobic)
MS0056	PWY-5686	UMP biosynthesis
MS0057	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
MS0057	PWY-5723	Rubisco shunt
MS0057	PWY-6891	thiazole biosynthesis II (Bacillus)
MS0057	PWY-6892	thiazole biosynthesis I (E. coli)
MS0057	PWY-6901	superpathway of glucose and xylose degradation
MS0057	PWY-7560	methylerythritol phosphate pathway II
MS0067	PWY-2941	L-lysine biosynthesis II
MS0067	PWY-2942	L-lysine biosynthesis III
MS0067	PWY-5097	L-lysine biosynthesis VI
MS0133	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
MS0150	PWY-7310	D-glucosaminate degradation
MS0152	PWY-7180	2'-deoxy-&alpha;-D-ribose 1-phosphate degradation
MS0172	PWY-6167	flavin biosynthesis II (archaea)
MS0172	PWY-6168	flavin biosynthesis III (fungi)
MS0182	PWY-5381	pyridine nucleotide cycling (plants)
MS0183	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
MS0183	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
MS0189	PWY-6749	CMP-legionaminate biosynthesis I
MS0218	PWY-6478	GDP-D-<i>glycero</i>-&alpha;-D-<i>manno</i>-heptose biosynthesis
MS0233	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
MS0235	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
MS0235	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
MS0236	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
MS0236	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
MS0237	PWY-4983	L-citrulline-nitric oxide cycle
MS0237	PWY-4984	urea cycle
MS0237	PWY-5	canavanine biosynthesis
MS0237	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
MS0237	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
MS0242	PWY-7039	phosphatidate metabolism, as a signaling molecule
MS0244	PWY-1042	glycolysis IV (plant cytosol)
MS0244	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
MS0244	PWY-5484	glycolysis II (from fructose 6-phosphate)
MS0244	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
MS0244	PWY-7385	1,3-propanediol biosynthesis (engineered)
MS0245	PWY-1042	glycolysis IV (plant cytosol)
MS0245	PWY-5484	glycolysis II (from fructose 6-phosphate)
MS0245	PWY-6886	1-butanol autotrophic biosynthesis
MS0245	PWY-6901	superpathway of glucose and xylose degradation
MS0245	PWY-7003	glycerol degradation to butanol
MS0250	PWY-5269	cardiolipin biosynthesis II
MS0250	PWY-5668	cardiolipin biosynthesis I
MS0251	PWY-5686	UMP biosynthesis
MS0255	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
MS0255	PWY-7177	UTP and CTP dephosphorylation II
MS0255	PWY-7185	UTP and CTP dephosphorylation I
MS0256	PWY-1042	glycolysis IV (plant cytosol)
MS0256	PWY-1622	formaldehyde assimilation I (serine pathway)
MS0256	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
MS0256	PWY-5484	glycolysis II (from fructose 6-phosphate)
MS0256	PWY-5723	Rubisco shunt
MS0256	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
MS0256	PWY-6886	1-butanol autotrophic biosynthesis
MS0256	PWY-6901	superpathway of glucose and xylose degradation
MS0256	PWY-7003	glycerol degradation to butanol
MS0256	PWY-7124	ethylene biosynthesis V (engineered)
MS0256	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
MS0262	PWY-381	nitrate reduction II (assimilatory)
MS0262	PWY-5675	nitrate reduction V (assimilatory)
MS0262	PWY-6549	L-glutamine biosynthesis III
MS0262	PWY-6963	ammonia assimilation cycle I
MS0262	PWY-6964	ammonia assimilation cycle II
MS0265	PWY-2941	L-lysine biosynthesis II
MS0265	PWY-2942	L-lysine biosynthesis III
MS0265	PWY-5097	L-lysine biosynthesis VI
MS0275	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
MS0275	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
MS0276	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
MS0276	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
MS0294	PWY-3781	aerobic respiration I (cytochrome c)
MS0294	PWY-4521	arsenite oxidation I (respiratory)
MS0294	PWY-6692	Fe(II) oxidation
MS0294	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
MS0297	PWY-6123	inosine-5'-phosphate biosynthesis I
MS0297	PWY-6124	inosine-5'-phosphate biosynthesis II
MS0297	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
MS0297	PWY-7234	inosine-5'-phosphate biosynthesis III
MS0324	PWY-1042	glycolysis IV (plant cytosol)
MS0324	PWY-5484	glycolysis II (from fructose 6-phosphate)
MS0324	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
MS0324	PWY-7003	glycerol degradation to butanol
MS0328	PWY-6502	oxidized GTP and dGTP detoxification
MS0345	PWY-3801	sucrose degradation II (sucrose synthase)
MS0345	PWY-6527	stachyose degradation
MS0345	PWY-6981	chitin biosynthesis
MS0345	PWY-7238	sucrose biosynthesis II
MS0345	PWY-7343	UDP-glucose biosynthesis
MS0346	PWY-6749	CMP-legionaminate biosynthesis I
MS0377	PWY-1042	glycolysis IV (plant cytosol)
MS0377	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
MS0377	PWY-5484	glycolysis II (from fructose 6-phosphate)
MS0377	PWY-7385	1,3-propanediol biosynthesis (engineered)
MS0379	PWY-1042	glycolysis IV (plant cytosol)
MS0379	PWY-5484	glycolysis II (from fructose 6-phosphate)
MS0379	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
MS0379	PWY-7003	glycerol degradation to butanol
MS0385	PWY-6825	phosphatidylcholine biosynthesis V
MS0389	PWY-6854	ethylene biosynthesis III (microbes)
MS0390	PWY-1281	sulfoacetaldehyde degradation I
MS0390	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
MS0390	PWY-5482	pyruvate fermentation to acetate II
MS0390	PWY-5485	pyruvate fermentation to acetate IV
MS0390	PWY-5497	purine nucleobases degradation II (anaerobic)
MS0390	PWY-6637	sulfolactate degradation II
MS0390	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
MS0396	PWY-6902	chitin degradation II
MS0401	PWY-5480	pyruvate fermentation to ethanol I
MS0401	PWY-5485	pyruvate fermentation to acetate IV
MS0401	PWY-5493	reductive monocarboxylic acid cycle
MS0405	PWY-3841	folate transformations II
MS0405	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
MS0405	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
MS0405	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
MS0405	PWY-7199	pyrimidine deoxyribonucleosides salvage
MS0405	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
MS0411	PWY-7310	D-glucosaminate degradation
MS0419	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
MS0419	PWY-6153	autoinducer AI-2 biosynthesis I
MS0419	PWY-6154	autoinducer AI-2 biosynthesis II (<i>Vibrio</i>)
MS0442	PWY-6829	tRNA methylation (yeast)
MS0442	PWY-7285	methylwyosine biosynthesis
MS0442	PWY-7286	7-(3-amino-3-carboxypropyl)-wyosine biosynthesis
MS0460	PWY-5971	palmitate biosynthesis II (bacteria and plants)
MS0460	PWY-5973	<i>cis</i>-vaccenate biosynthesis
MS0460	PWY-5989	stearate biosynthesis II (bacteria and plants)
MS0460	PWY-5994	palmitate biosynthesis I (animals and fungi)
MS0460	PWY-6113	superpathway of mycolate biosynthesis
MS0460	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
MS0460	PWY-6519	8-amino-7-oxononanoate biosynthesis I
MS0460	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
MS0460	PWYG-321	mycolate biosynthesis
MS0490	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
MS0503	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
MS0503	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
MS0510	PWY-5667	CDP-diacylglycerol biosynthesis I
MS0510	PWY-5981	CDP-diacylglycerol biosynthesis III
MS0510	PWY-7411	superpathway of phosphatidate biosynthesis (yeast)
MS0510	PWY-7417	phospholipid remodeling (phosphatidate, yeast)
MS0537	PWY-7242	D-fructuronate degradation
MS0544	PWY-7247	&beta;-D-glucuronide and D-glucuronate degradation
MS0544	PWY-7248	pectin degradation III
MS0546	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
MS0546	PWY-6507	4-deoxy-L-<i>threo</i>-hex-4-enopyranuronate degradation
MS0546	PWY-7242	D-fructuronate degradation
MS0546	PWY-7310	D-glucosaminate degradation
MS0563	PWY-6507	4-deoxy-L-<i>threo</i>-hex-4-enopyranuronate degradation
MS0566	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
MS0566	PWY-6507	4-deoxy-L-<i>threo</i>-hex-4-enopyranuronate degradation
MS0566	PWY-7242	D-fructuronate degradation
MS0566	PWY-7310	D-glucosaminate degradation
MS0569	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
MS0569	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
MS0569	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
MS0569	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
MS0569	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
MS0569	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
MS0598	PWY-7396	butanol and isobutanol biosynthesis (engineered)
MS0599	PWY-6871	3-methylbutanol biosynthesis
MS0614	PWY-3861	mannitol degradation II
MS0614	PWY-3881	mannitol biosynthesis
MS0614	PWY-5659	GDP-mannose biosynthesis
MS0614	PWY-7456	mannan degradation
MS0614	PWY-882	L-ascorbate biosynthesis I (L-galactose pathway)
MS0618	PWY-7310	D-glucosaminate degradation
MS0626	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
MS0626	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
MS0626	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
MS0627	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
MS0627	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
MS0628	PWY-7183	pyrimidine nucleobases salvage I
MS0633	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
MS0633	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
MS0633	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
MS0645	PWY-6317	galactose degradation I (Leloir pathway)
MS0645	PWY-6527	stachyose degradation
MS0647	PWY-6317	galactose degradation I (Leloir pathway)
MS0647	PWY-6527	stachyose degradation
MS0648	PWY-3821	galactose degradation III
MS0648	PWY-6317	galactose degradation I (Leloir pathway)
MS0648	PWY-6527	stachyose degradation
MS0649	PWY-2723	trehalose degradation V
MS0649	PWY-6317	galactose degradation I (Leloir pathway)
MS0649	PWY-6737	starch degradation V
MS0661	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
MS0661	PWY-7328	superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
MS0667	PWY-5988	wound-induced proteolysis I
MS0667	PWY-6018	seed germination protein turnover
MS0668	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
MS0668	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
MS0668	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
MS0668	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
MS0668	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
MS0668	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
MS0668	PWY-7205	CMP phosphorylation
MS0668	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
MS0668	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
MS0668	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
MS0668	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
MS0668	PWY-7224	purine deoxyribonucleosides salvage
MS0668	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
MS0668	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
MS0669	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
MS0669	PWY-5912	2'-deoxymugineic acid phytosiderophore biosynthesis
MS0676	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
MS0676	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
MS0676	PWY-6897	thiamin salvage II
MS0676	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
MS0676	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
MS0676	PWY-7353	4-methyl-5(&beta;-hydroxyethyl)thiazole salvage (yeast)
MS0676	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
MS0677	PWY-6910	hydroxymethylpyrimidine salvage
MS0677	PWY-7356	thiamin salvage IV (yeast)
MS0677	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
MS0683	PWY-6599	guanine and guanosine salvage II
MS0683	PWY-6609	adenine and adenosine salvage III
MS0683	PWY-6610	adenine and adenosine salvage IV
MS0683	PWY-6620	guanine and guanosine salvage
MS0689	PWY-6499	D-glucarate degradation II
MS0695	PWY-6497	D-galactarate degradation II
MS0703	PWY-5386	methylglyoxal degradation I
MS0732	PWY-1881	formate oxidation to CO<sub>2</sub>
MS0732	PWY-5497	purine nucleobases degradation II (anaerobic)
MS0732	PWY-6696	oxalate degradation III
MS0742	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
MS0742	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
MS0742	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
MS0745	PWY-5667	CDP-diacylglycerol biosynthesis I
MS0745	PWY-7411	superpathway of phosphatidate biosynthesis (yeast)
MS0749	PWY-6807	xyloglucan degradation II (exoglucanase)
MS0754	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
MS0760	PWY-5392	reductive TCA cycle II
MS0760	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
MS0760	PWY-5690	TCA cycle II (plants and fungi)
MS0760	PWY-5913	TCA cycle VI (obligate autotrophs)
MS0760	PWY-6728	methylaspartate cycle
MS0760	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
MS0760	PWY-7254	TCA cycle VII (acetate-producers)
MS0760	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
MS0768	PWY-4381	fatty acid biosynthesis initiation I
MS0768	PWY-5743	3-hydroxypropanoate cycle
MS0768	PWY-5744	glyoxylate assimilation
MS0768	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
MS0768	PWY-6679	jadomycin biosynthesis
MS0768	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
MS0771	PWY-6749	CMP-legionaminate biosynthesis I
MS0772	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
MS0774	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
MS0774	PWY-6596	adenosine nucleotides degradation I
MS0774	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
MS0775	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
MS0775	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
MS0784	PWY-7310	D-glucosaminate degradation
MS0787	PWY-2201	folate transformations I
MS0787	PWY-3841	folate transformations II
MS0796	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
MS0798	PWY-3821	galactose degradation III
MS0798	PWY-6317	galactose degradation I (Leloir pathway)
MS0798	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
MS0798	PWY-6527	stachyose degradation
MS0798	PWY-7328	superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
MS0798	PWY-7344	UDP-D-galactose biosynthesis
MS0805	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
MS0805	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
MS0806	PWY-6807	xyloglucan degradation II (exoglucanase)
MS0829	PWY-6409	pyoverdine I biosynthesis
MS0829	PWY-6562	norspermidine biosynthesis
MS0829	PWY-761	rhizobactin 1021 biosynthesis
MS0864	PWY-5791	1,4-dihydroxy-2-naphthoate biosynthesis II (plants)
MS0864	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
MS0866	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
MS0870	PWY-6605	adenine and adenosine salvage II
MS0870	PWY-6610	adenine and adenosine salvage IV
MS0876	PWY-6523	nitrite-dependent anaerobic methane oxidation
MS0876	PWY-6748	nitrate reduction VII (denitrification)
MS0876	PWY-7084	nitrifier denitrification
MS0896	PWY-5057	L-valine degradation II
MS0896	PWY-5076	L-leucine degradation III
MS0896	PWY-5078	L-isoleucine degradation II
MS0896	PWY-5101	L-isoleucine biosynthesis II
MS0896	PWY-5103	L-isoleucine biosynthesis III
MS0896	PWY-5104	L-isoleucine biosynthesis IV
MS0896	PWY-5108	L-isoleucine biosynthesis V
MS0909	PWY-621	sucrose degradation III (sucrose invertase)
MS0910	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
MS0911	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
MS0911	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
MS0911	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
MS0911	PWY-7290	<i>Escherichia coli</i> serotype O86 <i>O</i>-antigen biosynthesis
MS0911	PWY-7530	&beta;-D-galactosaminyl-(1&rarr;3)-<i>N</i>-acetyl-&alpha;-D-galactosamine biosynthesis
MS0924	PWY-5344	L-homocysteine biosynthesis
MS0925	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
MS0925	PWY-6148	tetrahydromethanopterin biosynthesis
MS0925	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
MS0925	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
MS0935	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
MS0935	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
MS0941	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
MS0941	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
MS0941	PWY-6936	seleno-amino acid biosynthesis
MS0941	PWY-702	L-methionine biosynthesis II
MS0946	PWY-5386	methylglyoxal degradation I
MS0957	PWY-5530	sorbitol biosynthesis II
MS0957	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
MS0959	PWY-5269	cardiolipin biosynthesis II
MS0959	PWY-5668	cardiolipin biosynthesis I
MS0960	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
MS0960	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
MS0966	PWY-6614	tetrahydrofolate biosynthesis
MS0967	PWY-6749	CMP-legionaminate biosynthesis I
MS0968	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
MS0968	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
MS0968	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
MS0968	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
MS0968	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
MS0968	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
MS0968	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
MS0968	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
MS0971	PWY-2941	L-lysine biosynthesis II
MS0971	PWY-2942	L-lysine biosynthesis III
MS0971	PWY-5097	L-lysine biosynthesis VI
MS0973	PWY-5269	cardiolipin biosynthesis II
MS0973	PWY-5668	cardiolipin biosynthesis I
MS0974	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
MS0974	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
MS0974	PWY-6896	thiamin salvage I
MS0974	PWY-6897	thiamin salvage II
MS0976	PWY-6167	flavin biosynthesis II (archaea)
MS0976	PWY-6168	flavin biosynthesis III (fungi)
MS0992	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
MS0992	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
MS0992	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
MS0992	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
MS0992	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
MS0992	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
MS0992	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
MS0992	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
MS0995	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
MS0995	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
MS0998	PWY-1281	sulfoacetaldehyde degradation I
MS0998	PWY-5482	pyruvate fermentation to acetate II
MS0998	PWY-5485	pyruvate fermentation to acetate IV
MS0998	PWY-5497	purine nucleobases degradation II (anaerobic)
MS0998	PWY-6637	sulfolactate degradation II
MS0999	PWY-5482	pyruvate fermentation to acetate II
MS0999	PWY-5485	pyruvate fermentation to acetate IV
MS0999	PWY-5497	purine nucleobases degradation II (anaerobic)
MS1003	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
MS1003	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
MS1003	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
MS1003	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
MS1004	PWY-6823	molybdenum cofactor biosynthesis
MS1005	PWY-6823	molybdenum cofactor biosynthesis
MS1006	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
MS1009	PWY-2201	folate transformations I
MS1009	PWY-3841	folate transformations II
MS1017	PWY-1622	formaldehyde assimilation I (serine pathway)
MS1017	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
MS1017	PWY-5913	TCA cycle VI (obligate autotrophs)
MS1017	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
MS1017	PWY-6146	<i>Methanobacterium thermoautotrophicum</i> biosynthetic metabolism
MS1017	PWY-6549	L-glutamine biosynthesis III
MS1017	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
MS1017	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
MS1017	PWY-7124	ethylene biosynthesis V (engineered)
MS1021	PWY-6823	molybdenum cofactor biosynthesis
MS1024	PWY-6823	molybdenum cofactor biosynthesis
MS1031	PWY-5913	TCA cycle VI (obligate autotrophs)
MS1031	PWY-6318	L-phenylalanine degradation IV (mammalian, via side chain)
MS1031	PWY-6638	sulfolactate degradation III
MS1031	PWY-6642	(<i>R</i>)-cysteate degradation
MS1031	PWY-6643	coenzyme M biosynthesis II
MS1031	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
MS1031	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
MS1031	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
MS1033	PWY-6123	inosine-5'-phosphate biosynthesis I
MS1033	PWY-7234	inosine-5'-phosphate biosynthesis III
MS1035	PWY-5686	UMP biosynthesis
MS1043	PWY-5663	tetrahydrobiopterin biosynthesis I
MS1043	PWY-5664	tetrahydrobiopterin biosynthesis II
MS1043	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
MS1043	PWY-6703	preQ<sub>0</sub> biosynthesis
MS1043	PWY-6983	tetrahydrobiopterin biosynthesis III
MS1043	PWY-7442	drosopterin and aurodrosopterin biosynthesis
MS1058	PWY-6984	lipoate salvage II
MS1058	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
MS1058	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
MS1059	PWY-6891	thiazole biosynthesis II (Bacillus)
MS1059	PWY-6892	thiazole biosynthesis I (E. coli)
MS1059	PWY-7560	methylerythritol phosphate pathway II
MS1065	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
MS1065	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
MS1065	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
MS1065	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
MS1069	PWY-6700	queuosine biosynthesis
MS1073	PWY-4981	L-proline biosynthesis II (from arginine)
MS1073	PWY-4984	urea cycle
MS1073	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
MS1101	PWY-2941	L-lysine biosynthesis II
MS1101	PWY-2942	L-lysine biosynthesis III
MS1101	PWY-5097	L-lysine biosynthesis VI
MS1101	PWY-6559	spermidine biosynthesis II
MS1101	PWY-6562	norspermidine biosynthesis
MS1101	PWY-7153	grixazone biosynthesis
MS1102	PWY-3461	L-tyrosine biosynthesis II
MS1102	PWY-3462	L-phenylalanine biosynthesis II
MS1102	PWY-6120	L-tyrosine biosynthesis III
MS1102	PWY-6627	salinosporamide A biosynthesis
MS1102	PWY-7303	3-dimethylallyl-4-hydroxybenzoate biosynthesis
MS1104	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
MS1104	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
MS1104	PWY-6164	3-dehydroquinate biosynthesis I
MS1111	PWY-6902	chitin degradation II
MS1119	PWY-5941	glycogen degradation II (eukaryotic)
MS1119	PWY-622	starch biosynthesis
MS1119	PWY-6731	starch degradation III
MS1119	PWY-6737	starch degradation V
MS1119	PWY-7238	sucrose biosynthesis II
MS1120	PWY-622	starch biosynthesis
MS1121	PWY-622	starch biosynthesis
MS1123	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
MS1123	PWY-622	starch biosynthesis
MS1124	PWY-5941	glycogen degradation II (eukaryotic)
MS1124	PWY-6724	starch degradation II
MS1124	PWY-6737	starch degradation V
MS1124	PWY-7238	sucrose biosynthesis II
MS1127	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
MS1149	PWY-5958	acridone alkaloid biosynthesis
MS1149	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
MS1149	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
MS1150	PWY-5958	acridone alkaloid biosynthesis
MS1150	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
MS1150	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
MS1173	PWY-2161	folate polyglutamylation
MS1174	PWY-4381	fatty acid biosynthesis initiation I
MS1174	PWY-5743	3-hydroxypropanoate cycle
MS1174	PWY-5744	glyoxylate assimilation
MS1174	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
MS1174	PWY-6679	jadomycin biosynthesis
MS1174	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
MS1181	PWY-3801	sucrose degradation II (sucrose synthase)
MS1181	PWY-5054	sorbitol biosynthesis I
MS1181	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
MS1181	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
MS1181	PWY-5659	GDP-mannose biosynthesis
MS1181	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
MS1181	PWY-621	sucrose degradation III (sucrose invertase)
MS1181	PWY-622	starch biosynthesis
MS1181	PWY-6531	mannitol cycle
MS1181	PWY-6981	chitin biosynthesis
MS1181	PWY-7238	sucrose biosynthesis II
MS1181	PWY-7347	sucrose biosynthesis III
MS1181	PWY-7385	1,3-propanediol biosynthesis (engineered)
MS1182	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
MS1184	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
MS1184	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
MS1184	PWY-6164	3-dehydroquinate biosynthesis I
MS1189	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
MS1189	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
MS1194	PWY-5971	palmitate biosynthesis II (bacteria and plants)
MS1194	PWY-5973	<i>cis</i>-vaccenate biosynthesis
MS1194	PWY-5989	stearate biosynthesis II (bacteria and plants)
MS1194	PWY-5994	palmitate biosynthesis I (animals and fungi)
MS1194	PWY-6113	superpathway of mycolate biosynthesis
MS1194	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
MS1194	PWY-6519	8-amino-7-oxononanoate biosynthesis I
MS1194	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
MS1194	PWYG-321	mycolate biosynthesis
MS1197	PWY-1042	glycolysis IV (plant cytosol)
MS1197	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
MS1197	PWY-5484	glycolysis II (from fructose 6-phosphate)
MS1197	PWY-5723	Rubisco shunt
MS1197	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
MS1197	PWY-6886	1-butanol autotrophic biosynthesis
MS1197	PWY-6901	superpathway of glucose and xylose degradation
MS1197	PWY-7003	glycerol degradation to butanol
MS1197	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
MS1197	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
MS1211	PWY-6938	NADH repair
MS1221	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
MS1221	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
MS1227	PWY-6527	stachyose degradation
MS1237	PWY-7310	D-glucosaminate degradation
MS1241	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
MS1249	PWY-6683	sulfate reduction III (assimilatory)
MS1250	PWY-6683	sulfate reduction III (assimilatory)
MS1251	PWY-5278	sulfite oxidation III
MS1251	PWY-5340	sulfate activation for sulfonation
MS1251	PWY-6683	sulfate reduction III (assimilatory)
MS1251	PWY-6932	selenate reduction
MS1252	PWY-5278	sulfite oxidation III
MS1252	PWY-5340	sulfate activation for sulfonation
MS1252	PWY-6683	sulfate reduction III (assimilatory)
MS1252	PWY-6932	selenate reduction
MS1254	PWY-5194	siroheme biosynthesis
MS1254	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
MS1266	PWY-1622	formaldehyde assimilation I (serine pathway)
MS1266	PWY-5392	reductive TCA cycle II
MS1266	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
MS1266	PWY-5690	TCA cycle II (plants and fungi)
MS1266	PWY-5913	TCA cycle VI (obligate autotrophs)
MS1266	PWY-6728	methylaspartate cycle
MS1266	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
MS1266	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
MS1266	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
MS1273	PWY-6823	molybdenum cofactor biosynthesis
MS1273	PWY-6891	thiazole biosynthesis II (Bacillus)
MS1273	PWY-6892	thiazole biosynthesis I (E. coli)
MS1273	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
MS1295	PWY-1622	formaldehyde assimilation I (serine pathway)
MS1295	PWY-181	photorespiration
MS1295	PWY-2161	folate polyglutamylation
MS1295	PWY-2201	folate transformations I
MS1295	PWY-3661	glycine betaine degradation I
MS1295	PWY-3661-1	glycine betaine degradation II (mammalian)
MS1295	PWY-3841	folate transformations II
MS1295	PWY-5497	purine nucleobases degradation II (anaerobic)
MS1296	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
MS1296	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
MS1296	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
MS1297	PWY-6123	inosine-5'-phosphate biosynthesis I
MS1297	PWY-6124	inosine-5'-phosphate biosynthesis II
MS1297	PWY-7234	inosine-5'-phosphate biosynthesis III
MS1312	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
MS1312	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
MS1312	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
MS1312	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
MS1313	PWY-6167	flavin biosynthesis II (archaea)
MS1313	PWY-6168	flavin biosynthesis III (fungi)
MS1313	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
MS1318	PWY-5101	L-isoleucine biosynthesis II
MS1318	PWY-5103	L-isoleucine biosynthesis III
MS1318	PWY-5104	L-isoleucine biosynthesis IV
MS1318	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
MS1318	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
MS1318	PWY-6389	(<i>S</i>)-acetoin biosynthesis
MS1318	PWY-7111	pyruvate fermentation to isobutanol (engineered)
MS1319	PWY-5101	L-isoleucine biosynthesis II
MS1319	PWY-5103	L-isoleucine biosynthesis III
MS1319	PWY-5104	L-isoleucine biosynthesis IV
MS1319	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
MS1319	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
MS1319	PWY-6389	(<i>S</i>)-acetoin biosynthesis
MS1319	PWY-7111	pyruvate fermentation to isobutanol (engineered)
MS1323	PWY-2201	folate transformations I
MS1323	PWY-5497	purine nucleobases degradation II (anaerobic)
MS1324	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
MS1334	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
MS1334	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
MS1336	PWY-6891	thiazole biosynthesis II (Bacillus)
MS1336	PWY-6892	thiazole biosynthesis I (E. coli)
MS1336	PWY-7560	methylerythritol phosphate pathway II
MS1348	PWY-5344	L-homocysteine biosynthesis
MS1348	PWY-7174	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation II
MS1351	PWY-5392	reductive TCA cycle II
MS1351	PWY-5537	pyruvate fermentation to acetate V
MS1351	PWY-5538	pyruvate fermentation to acetate VI
MS1351	PWY-5690	TCA cycle II (plants and fungi)
MS1351	PWY-5913	TCA cycle VI (obligate autotrophs)
MS1351	PWY-6728	methylaspartate cycle
MS1351	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
MS1351	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
MS1352	PWY-5392	reductive TCA cycle II
MS1352	PWY-5537	pyruvate fermentation to acetate V
MS1352	PWY-5538	pyruvate fermentation to acetate VI
MS1352	PWY-5690	TCA cycle II (plants and fungi)
MS1352	PWY-5913	TCA cycle VI (obligate autotrophs)
MS1352	PWY-6728	methylaspartate cycle
MS1352	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
MS1352	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
MS1354	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
MS1355	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
MS1386	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
MS1386	PWY-3162	L-tryptophan degradation V (side chain pathway)
MS1386	PWY-5057	L-valine degradation II
MS1386	PWY-5076	L-leucine degradation III
MS1386	PWY-5078	L-isoleucine degradation II
MS1386	PWY-5079	L-phenylalanine degradation III
MS1386	PWY-5082	L-methionine degradation III
MS1386	PWY-5480	pyruvate fermentation to ethanol I
MS1386	PWY-5486	pyruvate fermentation to ethanol II
MS1386	PWY-5751	phenylethanol biosynthesis
MS1386	PWY-6028	acetoin degradation
MS1386	PWY-6313	serotonin degradation
MS1386	PWY-6333	acetaldehyde biosynthesis I
MS1386	PWY-6342	noradrenaline and adrenaline degradation
MS1386	PWY-6587	pyruvate fermentation to ethanol III
MS1386	PWY-6802	salidroside biosynthesis
MS1386	PWY-6871	3-methylbutanol biosynthesis
MS1386	PWY-7013	L-1,2-propanediol degradation
MS1386	PWY-7111	pyruvate fermentation to isobutanol (engineered)
MS1386	PWY-7118	chitin degradation to ethanol
MS1386	PWY-7396	butanol and isobutanol biosynthesis (engineered)
MS1386	PWY-7557	dehydrodiconiferyl alcohol degradation
MS1387	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
MS1450	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
MS1464	PWY-5663	tetrahydrobiopterin biosynthesis I
MS1464	PWY-5664	tetrahydrobiopterin biosynthesis II
MS1464	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
MS1464	PWY-6703	preQ<sub>0</sub> biosynthesis
MS1464	PWY-6983	tetrahydrobiopterin biosynthesis III
MS1464	PWY-7442	drosopterin and aurodrosopterin biosynthesis
MS1467	PWY-5971	palmitate biosynthesis II (bacteria and plants)
MS1467	PWY-5973	<i>cis</i>-vaccenate biosynthesis
MS1467	PWY-5989	stearate biosynthesis II (bacteria and plants)
MS1467	PWY-6113	superpathway of mycolate biosynthesis
MS1467	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
MS1467	PWY-6519	8-amino-7-oxononanoate biosynthesis I
MS1467	PWY-7096	triclosan resistance
MS1467	PWYG-321	mycolate biosynthesis
MS1472	PWY-5686	UMP biosynthesis
MS1477	PWY-7205	CMP phosphorylation
MS1478	PWY-7310	D-glucosaminate degradation
MS1479	PWY-4983	L-citrulline-nitric oxide cycle
MS1479	PWY-4984	urea cycle
MS1479	PWY-5	canavanine biosynthesis
MS1479	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
MS1479	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
MS1481	PWY-6123	inosine-5'-phosphate biosynthesis I
MS1481	PWY-6124	inosine-5'-phosphate biosynthesis II
MS1481	PWY-7234	inosine-5'-phosphate biosynthesis III
MS1517	PWY-2781	<i>cis</i>-zeatin biosynthesis
MS1520	PWY-6936	seleno-amino acid biosynthesis
MS1523	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
MS1527	PWY-6517	<i>N</i>-acetylglucosamine degradation II
MS1527	PWY-6906	chitin derivatives degradation
MS1533	PWY-6168	flavin biosynthesis III (fungi)
MS1533	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
MS1535	PWY-7560	methylerythritol phosphate pathway II
MS1537	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
MS1537	PWY-6153	autoinducer AI-2 biosynthesis I
MS1537	PWY-6154	autoinducer AI-2 biosynthesis II (<i>Vibrio</i>)
MS1550	PWY-5988	wound-induced proteolysis I
MS1550	PWY-6018	seed germination protein turnover
MS1558	PWY-6700	queuosine biosynthesis
MS1559	PWY-6700	queuosine biosynthesis
MS1575	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
MS1581	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
MS1582	PWY-7193	pyrimidine ribonucleosides salvage I
MS1593	PWY-3221	dTDP-L-rhamnose biosynthesis II
MS1593	PWY-6808	dTDP-D-forosamine biosynthesis
MS1593	PWY-6942	dTDP-D-desosamine biosynthesis
MS1593	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
MS1593	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
MS1593	PWY-6974	dTDP-L-olivose biosynthesis
MS1593	PWY-6976	dTDP-L-mycarose biosynthesis
MS1593	PWY-7104	dTDP-L-megosamine biosynthesis
MS1593	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
MS1593	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
MS1593	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
MS1593	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
MS1593	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
MS1593	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
MS1593	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
MS1593	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
MS1609	PWY-4261	glycerol degradation I
MS1613	PWY-2941	L-lysine biosynthesis II
MS1613	PWY-2942	L-lysine biosynthesis III
MS1613	PWY-5097	L-lysine biosynthesis VI
MS1613	PWY-6559	spermidine biosynthesis II
MS1613	PWY-6562	norspermidine biosynthesis
MS1613	PWY-7153	grixazone biosynthesis
MS1615	PWY-5484	glycolysis II (from fructose 6-phosphate)
MS1621	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
MS1652	PWY-3781	aerobic respiration I (cytochrome c)
MS1652	PWY-4302	aerobic respiration III (alternative oxidase pathway)
MS1652	PWY-5392	reductive TCA cycle II
MS1652	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
MS1652	PWY-5690	TCA cycle II (plants and fungi)
MS1652	PWY-5913	TCA cycle VI (obligate autotrophs)
MS1652	PWY-6728	methylaspartate cycle
MS1652	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
MS1652	PWY-7254	TCA cycle VII (acetate-producers)
MS1652	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
MS1652	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
MS1653	PWY-3781	aerobic respiration I (cytochrome c)
MS1653	PWY-4302	aerobic respiration III (alternative oxidase pathway)
MS1653	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
MS1653	PWY-5690	TCA cycle II (plants and fungi)
MS1653	PWY-6728	methylaspartate cycle
MS1653	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
MS1653	PWY-7254	TCA cycle VII (acetate-producers)
MS1653	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
MS1657	PWY-3461	L-tyrosine biosynthesis II
MS1657	PWY-3462	L-phenylalanine biosynthesis II
MS1657	PWY-6120	L-tyrosine biosynthesis III
MS1657	PWY-6627	salinosporamide A biosynthesis
MS1657	PWY-7432	L-phenylalanine biosynthesis III (cytosolic, plants)
MS1664	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
MS1664	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
MS1666	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
MS1666	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
MS1667	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
MS1667	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
MS1667	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
MS1667	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
MS1669	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
MS1669	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
MS1670	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
MS1670	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
MS1670	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
MS1671	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
MS1671	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
MS1683	PWY-6840	homoglutathione biosynthesis
MS1683	PWY-7255	ergothioneine biosynthesis I (bacteria)
MS1695	PWY-6012	acyl carrier protein metabolism I
MS1695	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
MS1702	PWY-702	L-methionine biosynthesis II
MS1703	PWY-2941	L-lysine biosynthesis II
MS1703	PWY-2942	L-lysine biosynthesis III
MS1703	PWY-5097	L-lysine biosynthesis VI
MS1703	PWY-6559	spermidine biosynthesis II
MS1703	PWY-6562	norspermidine biosynthesis
MS1703	PWY-7153	grixazone biosynthesis
MS1704	PWY-6854	ethylene biosynthesis III (microbes)
MS1705	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
MS1707	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
MS1707	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
MS1726	PWY-6823	molybdenum cofactor biosynthesis
MS1726	PWY-6891	thiazole biosynthesis II (Bacillus)
MS1726	PWY-6892	thiazole biosynthesis I (E. coli)
MS1726	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
MS1729	PWY-2301	<i>myo</i>-inositol biosynthesis
MS1729	PWY-4702	phytate degradation I
MS1729	PWY-6363	D-<i>myo</i>-inositol (1,4,5)-trisphosphate degradation
MS1734	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
MS1734	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
MS1738	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
MS1739	PWY-1042	glycolysis IV (plant cytosol)
MS1739	PWY-5484	glycolysis II (from fructose 6-phosphate)
MS1739	PWY-6901	superpathway of glucose and xylose degradation
MS1739	PWY-7003	glycerol degradation to butanol
MS1744	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
MS1744	PWY-5723	Rubisco shunt
MS1747	PWY-7206	pyrimidine deoxyribonucleotides dephosphorylation
MS1749	PWY-7560	methylerythritol phosphate pathway II
MS1752	PWY-5523	5,6-dimethylbenzimidazole biosynthesis
MS1752	PWY-6167	flavin biosynthesis II (archaea)
MS1752	PWY-6168	flavin biosynthesis III (fungi)
MS1764	PWY-7199	pyrimidine deoxyribonucleosides salvage
MS1770	PWY-6936	seleno-amino acid biosynthesis
MS1784	PWY-2941	L-lysine biosynthesis II
MS1784	PWY-5097	L-lysine biosynthesis VI
MS1790	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
MS1790	PWY-6416	quinate degradation II
MS1790	PWY-6707	gallate biosynthesis
MS1791	PWY-5791	1,4-dihydroxy-2-naphthoate biosynthesis II (plants)
MS1791	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
MS1792	PWY-5791	1,4-dihydroxy-2-naphthoate biosynthesis II (plants)
MS1792	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
MS1794	PWY-5791	1,4-dihydroxy-2-naphthoate biosynthesis II (plants)
MS1794	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
MS1795	PWY-5791	1,4-dihydroxy-2-naphthoate biosynthesis II (plants)
MS1795	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
MS1795	PWY-5901	2,3-dihydroxybenzoate biosynthesis
MS1795	PWY-6406	salicylate biosynthesis I
MS1799	PWY-3341	L-proline biosynthesis III
MS1799	PWY-4981	L-proline biosynthesis II (from arginine)
MS1799	PWY-6344	L-ornithine degradation II (Stickland reaction)
MS1806	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
MS1806	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
MS1806	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
MS1819	PWY-5674	nitrate reduction IV (dissimilatory)
MS1824	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
MS1824	PWY-6148	tetrahydromethanopterin biosynthesis
MS1824	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
MS1824	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
MS1826	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
MS1826	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
MS1826	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
MS1827	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
MS1827	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
MS1829	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
MS1829	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
MS1835	PWY-6556	pyrimidine ribonucleosides salvage II
MS1835	PWY-7181	pyrimidine deoxyribonucleosides degradation
MS1835	PWY-7193	pyrimidine ribonucleosides salvage I
MS1835	PWY-7199	pyrimidine deoxyribonucleosides salvage
MS1837	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
MS1840	PWY-5839	menaquinol-7 biosynthesis
MS1840	PWY-5851	demethylmenaquinol-9 biosynthesis
MS1840	PWY-5852	demethylmenaquinol-8 biosynthesis I
MS1840	PWY-5853	demethylmenaquinol-6 biosynthesis I
MS1840	PWY-5890	menaquinol-10 biosynthesis
MS1840	PWY-5891	menaquinol-11 biosynthesis
MS1840	PWY-5892	menaquinol-12 biosynthesis
MS1840	PWY-5895	menaquinol-13 biosynthesis
MS1851	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
MS1851	PWY-2201	folate transformations I
MS1851	PWY-3841	folate transformations II
MS1851	PWY-5030	L-histidine degradation III
MS1851	PWY-5497	purine nucleobases degradation II (anaerobic)
MS1851	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
MS1852	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
MS1852	PWY-2201	folate transformations I
MS1852	PWY-3841	folate transformations II
MS1852	PWY-5030	L-histidine degradation III
MS1852	PWY-5497	purine nucleobases degradation II (anaerobic)
MS1852	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
MS1855	PWY-6703	preQ<sub>0</sub> biosynthesis
MS1857	PWY-6703	preQ<sub>0</sub> biosynthesis
MS1858	PWY-3841	folate transformations II
MS1858	PWY-6614	tetrahydrofolate biosynthesis
MS1864	PWY-5669	phosphatidylethanolamine biosynthesis I
MS1871	PWY-4381	fatty acid biosynthesis initiation I
MS1872	PWY-4381	fatty acid biosynthesis initiation I
MS1873	PWY-4381	fatty acid biosynthesis initiation I
MS1873	PWY-6799	fatty acid biosynthesis (plant mitochondria)
MS1873	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
MS1874	PWY-5367	petroselinate biosynthesis
MS1874	PWY-5971	palmitate biosynthesis II (bacteria and plants)
MS1874	PWY-5973	<i>cis</i>-vaccenate biosynthesis
MS1874	PWY-5989	stearate biosynthesis II (bacteria and plants)
MS1874	PWY-5994	palmitate biosynthesis I (animals and fungi)
MS1874	PWY-6113	superpathway of mycolate biosynthesis
MS1874	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
MS1874	PWY-6519	8-amino-7-oxononanoate biosynthesis I
MS1874	PWY-6951	MS1874|fabG|YP_089066.1|GeneID:3075452
MS1874	PWY-7053	docosahexaenoate biosynthesis I (lower eukaryotes)
MS1874	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
MS1874	PWYG-321	mycolate biosynthesis
MS1880	PWY-7183	pyrimidine nucleobases salvage I
MS1889	PWY-5381	pyridine nucleotide cycling (plants)
MS1899	PWY-4202	arsenate detoxification I (glutaredoxin)
MS1899	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
MS1899	PWY-6608	guanosine nucleotides degradation III
MS1899	PWY-6609	adenine and adenosine salvage III
MS1899	PWY-6611	adenine and adenosine salvage V
MS1899	PWY-6620	guanine and guanosine salvage
MS1899	PWY-6627	salinosporamide A biosynthesis
MS1899	PWY-6644	fluoroacetate and fluorothreonine biosynthesis
MS1899	PWY-7179	purine deoxyribonucleosides degradation I
MS1899	PWY-7179-1	purine deoxyribonucleosides degradation
MS1919	PWY-7560	methylerythritol phosphate pathway II
MS1928	PWY-7560	methylerythritol phosphate pathway II
MS1937	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
MS1937	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
MS1937	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
MS1937	PWY-7206	pyrimidine deoxyribonucleotides dephosphorylation
MS1949	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
MS1959	PWY-4202	arsenate detoxification I (glutaredoxin)
MS1959	PWY-4621	arsenate detoxification II (glutaredoxin)
MS1968	PWY-6164	3-dehydroquinate biosynthesis I
MS1969	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
MS1984	PWY-5392	reductive TCA cycle II
MS1984	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
MS1984	PWY-5690	TCA cycle II (plants and fungi)
MS1984	PWY-5913	TCA cycle VI (obligate autotrophs)
MS1984	PWY-6728	methylaspartate cycle
MS1984	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
MS1984	PWY-7254	TCA cycle VII (acetate-producers)
MS1984	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
MS1985	PWY-4081	glutathione redox reactions I
MS1988	PWY-4261	glycerol degradation I
MS1993	PWY-4261	glycerol degradation I
MS1993	PWY-6118	glycerol-3-phosphate shuttle
MS1993	PWY-6952	glycerophosphodiester degradation
MS1994	PWY-4261	glycerol degradation I
MS1994	PWY-6118	glycerol-3-phosphate shuttle
MS1994	PWY-6952	glycerophosphodiester degradation
MS2057	PWY-5964	guanylyl molybdenum cofactor biosynthesis
MS2064	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
MS2064	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
MS2071	PWY-842	starch degradation I
MS2073	PWY-5941	glycogen degradation II (eukaryotic)
MS2073	PWY-622	starch biosynthesis
MS2073	PWY-6731	starch degradation III
MS2073	PWY-6737	starch degradation V
MS2073	PWY-7238	sucrose biosynthesis II
MS2074	PWY-5941	glycogen degradation II (eukaryotic)
MS2074	PWY-6724	starch degradation II
MS2074	PWY-6737	starch degradation V
MS2074	PWY-7238	sucrose biosynthesis II
MS2084	PWY-2941	L-lysine biosynthesis II
MS2084	PWY-2942	L-lysine biosynthesis III
MS2084	PWY-5097	L-lysine biosynthesis VI
MS2178	PWY-7310	D-glucosaminate degradation
MS2183	PWY-5350	thiosulfate disproportionation III (rhodanese)
MS2188	PWY-3961	phosphopantothenate biosynthesis II
MS2190	PWY-3162	L-tryptophan degradation V (side chain pathway)
MS2190	PWY-5057	L-valine degradation II
MS2190	PWY-5076	L-leucine degradation III
MS2190	PWY-5078	L-isoleucine degradation II
MS2190	PWY-5079	L-phenylalanine degradation III
MS2190	PWY-5082	L-methionine degradation III
MS2190	PWY-5162	2-oxopentenoate degradation
MS2190	PWY-5436	L-threonine degradation IV
MS2190	PWY-5480	pyruvate fermentation to ethanol I
MS2190	PWY-5486	pyruvate fermentation to ethanol II
MS2190	PWY-5751	phenylethanol biosynthesis
MS2190	PWY-6028	acetoin degradation
MS2190	PWY-6313	serotonin degradation
MS2190	PWY-6333	acetaldehyde biosynthesis I
MS2190	PWY-6342	noradrenaline and adrenaline degradation
MS2190	PWY-6587	pyruvate fermentation to ethanol III
MS2190	PWY-6802	salidroside biosynthesis
MS2190	PWY-6871	3-methylbutanol biosynthesis
MS2190	PWY-7013	L-1,2-propanediol degradation
MS2190	PWY-7085	triethylamine degradation
MS2190	PWY-7111	pyruvate fermentation to isobutanol (engineered)
MS2190	PWY-7118	chitin degradation to ethanol
MS2190	PWY-7180	2'-deoxy-&alpha;-D-ribose 1-phosphate degradation
MS2190	PWY-7396	butanol and isobutanol biosynthesis (engineered)
MS2190	PWY-7557	dehydrodiconiferyl alcohol degradation
MS2193	PWY-5958	acridone alkaloid biosynthesis
MS2193	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
MS2193	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
MS2194	PWY-5958	acridone alkaloid biosynthesis
MS2194	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
MS2194	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
MS2204	PWY-6906	chitin derivatives degradation
MS2204	PWY-7077	<i>N</i>-acetyl-D-galactosamine degradation
MS2204	PWY-7395	D-galactosamine and <i>N</i>-acetyl-D-galactosamine degradation
MS2205	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
MS2205	PWY-6855	chitin degradation I (archaea)
MS2205	PWY-6906	chitin derivatives degradation
MS2212	PWY-6936	seleno-amino acid biosynthesis
MS2212	PWY-7274	D-cycloserine biosynthesis
MS2213	PWY-5667	CDP-diacylglycerol biosynthesis I
MS2213	PWY-5981	CDP-diacylglycerol biosynthesis III
MS2219	PWY-5101	L-isoleucine biosynthesis II
MS2219	PWY-5103	L-isoleucine biosynthesis III
MS2219	PWY-5104	L-isoleucine biosynthesis IV
MS2219	PWY-7111	pyruvate fermentation to isobutanol (engineered)
MS2223	PWY-5101	L-isoleucine biosynthesis II
MS2223	PWY-5103	L-isoleucine biosynthesis III
MS2223	PWY-5104	L-isoleucine biosynthesis IV
MS2223	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
MS2223	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
MS2223	PWY-6389	(<i>S</i>)-acetoin biosynthesis
MS2223	PWY-7111	pyruvate fermentation to isobutanol (engineered)
MS2236	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
MS2236	PWY-5686	UMP biosynthesis
MS2236	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
MS2237	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
MS2237	PWY-5686	UMP biosynthesis
MS2237	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
MS2241	PWY-6784	cellulose and hemicellulose degradation (cellulolosome)
MS2254	PWY-5484	glycolysis II (from fructose 6-phosphate)
MS2272	PWY-5381	pyridine nucleotide cycling (plants)
MS2272	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
MS2272	PWY-6596	adenosine nucleotides degradation I
MS2272	PWY-6606	guanosine nucleotides degradation II
MS2272	PWY-6607	guanosine nucleotides degradation I
MS2272	PWY-6608	guanosine nucleotides degradation III
MS2272	PWY-7185	UTP and CTP dephosphorylation I
MS2274	PWY-7560	methylerythritol phosphate pathway II
MS2275	PWY-7560	methylerythritol phosphate pathway II
MS2293	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
MS2293	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
MS2315	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
MS2318	PWY-4202	arsenate detoxification I (glutaredoxin)
MS2318	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
MS2318	PWY-6608	guanosine nucleotides degradation III
MS2318	PWY-6609	adenine and adenosine salvage III
MS2318	PWY-6611	adenine and adenosine salvage V
MS2318	PWY-6620	guanine and guanosine salvage
MS2318	PWY-6627	salinosporamide A biosynthesis
MS2318	PWY-6644	fluoroacetate and fluorothreonine biosynthesis
MS2318	PWY-7179	purine deoxyribonucleosides degradation I
MS2318	PWY-7179-1	purine deoxyribonucleosides degradation
MS2321	PWY-1622	formaldehyde assimilation I (serine pathway)
MS2321	PWY-5484	glycolysis II (from fructose 6-phosphate)
MS2330	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
MS2330	PWY-5723	Rubisco shunt
MS2331	PWY-181	photorespiration
MS2346	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
MS2348	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
MS2355	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
MS2355	PWY-5723	Rubisco shunt
MS2369	PWY-5747	2-methylcitrate cycle II
MS2370	PWY-5913	TCA cycle VI (obligate autotrophs)
MS2370	PWY-6549	L-glutamine biosynthesis III
MS2370	PWY-6728	methylaspartate cycle
MS2370	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
MS2370	PWY-7124	ethylene biosynthesis V (engineered)
MS2370	PWY-7254	TCA cycle VII (acetate-producers)
MS2370	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
MS2372	PWY-4261	glycerol degradation I
MS2379	PWY-7310	D-glucosaminate degradation
