Msed_0012 PWY-7432 L-phenylalanine biosynthesis III (cytosolic, plants) Msed_0015 PWY-7219 adenosine ribonucleotides de novo biosynthesis Msed_0016 PWY-7234 inosine-5'-phosphate biosynthesis III Msed_0017 PWY-7234 inosine-5'-phosphate biosynthesis III Msed_0018 PWY-6123 inosine-5'-phosphate biosynthesis I Msed_0018 PWY-6124 inosine-5'-phosphate biosynthesis II Msed_0018 PWY-7219 adenosine ribonucleotides de novo biosynthesis Msed_0018 PWY-7234 inosine-5'-phosphate biosynthesis III Msed_0019 PWY-6893 thiamin diphosphate biosynthesis II (Bacillus) Msed_0019 PWY-6894 thiamin diphosphate biosynthesis I (E. coli) Msed_0019 PWY-6896 thiamin salvage I Msed_0019 PWY-6897 thiamin salvage II Msed_0020 PWY-6823 molybdenum cofactor biosynthesis Msed_0021 PWY-6167 flavin biosynthesis II (archaea) Msed_0021 PWY-6168 flavin biosynthesis III (fungi) Msed_0025 PWY-6556 pyrimidine ribonucleosides salvage II Msed_0025 PWY-7181 pyrimidine deoxyribonucleosides degradation Msed_0025 PWY-7193 pyrimidine ribonucleosides salvage I Msed_0025 PWY-7199 pyrimidine deoxyribonucleosides salvage Msed_0026 PWY-7183 pyrimidine nucleobases salvage I Msed_0029 PWY-6545 pyrimidine deoxyribonucleotides de novo biosynthesis III Msed_0029 PWY-7176 UTP and CTP de novo biosynthesis Msed_0029 PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I Msed_0029 PWY-7187 pyrimidine deoxyribonucleotides de novo biosynthesis II Msed_0029 PWY-7197 pyrimidine deoxyribonucleotide phosphorylation Msed_0029 PWY-7198 pyrimidine deoxyribonucleotides de novo biosynthesis IV Msed_0029 PWY-7205 CMP phosphorylation Msed_0029 PWY-7210 pyrimidine deoxyribonucleotides biosynthesis from CTP Msed_0029 PWY-7220 adenosine deoxyribonucleotides de novo biosynthesis II Msed_0029 PWY-7221 guanosine ribonucleotides de novo biosynthesis Msed_0029 PWY-7222 guanosine deoxyribonucleotides de novo biosynthesis II Msed_0029 PWY-7224 purine deoxyribonucleosides salvage Msed_0029 PWY-7226 guanosine deoxyribonucleotides de novo biosynthesis I Msed_0029 PWY-7227 adenosine deoxyribonucleotides de novo biosynthesis Msed_0046 PWY-6167 flavin biosynthesis II (archaea) Msed_0046 PWY-6168 flavin biosynthesis III (fungi) Msed_0047 PWY-6167 flavin biosynthesis II (archaea) Msed_0047 PWY-6168 flavin biosynthesis III (fungi) Msed_0048 PWY-6167 flavin biosynthesis II (archaea) Msed_0048 PWY-6168 flavin biosynthesis III (fungi) Msed_0049 PWY-6167 flavin biosynthesis II (archaea) Msed_0068 PWY-5514 UDP-N-acetyl-D-galactosamine biosynthesis II Msed_0115 PWY-7219 adenosine ribonucleotides de novo biosynthesis Msed_0118 PWY-7205 CMP phosphorylation Msed_0126 PWY-5796 malonate decarboxylase activation Msed_0151 PWY-7187 pyrimidine deoxyribonucleotides de novo biosynthesis II Msed_0164 PWY-5154 L-arginine biosynthesis III (via N-acetyl-L-citrulline) Msed_0164 PWY-7400 L-arginine biosynthesis IV (archaebacteria) Msed_0165 PWY-5154 L-arginine biosynthesis III (via N-acetyl-L-citrulline) Msed_0165 PWY-7400 L-arginine biosynthesis IV (archaebacteria) Msed_0184 PWY-6910 hydroxymethylpyrimidine salvage Msed_0184 PWY-7356 thiamin salvage IV (yeast) Msed_0184 PWY-7357 thiamin formation from pyrithiamine and oxythiamine (yeast) Msed_0198 PWY-5508 adenosylcobalamin biosynthesis from cobyrinate a,c-diamide II Msed_0198 PWY-5509 adenosylcobalamin biosynthesis from cobyrinate a,c-diamide I Msed_0198 PWY-6269 adenosylcobalamin salvage from cobinamide II Msed_0200 PWY-7221 guanosine ribonucleotides de novo biosynthesis Msed_0213 PWY-5194 siroheme biosynthesis Msed_0213 PWY-7377 cob(II)yrinate a,c-diamide biosynthesis I (early cobalt insertion) Msed_0214 PWY-5188 tetrapyrrole biosynthesis I (from glutamate) Msed_0215 PWY-5188 tetrapyrrole biosynthesis I (from glutamate) Msed_0215 PWY-5189 tetrapyrrole biosynthesis II (from glycine) Msed_0216 PWY-5188 tetrapyrrole biosynthesis I (from glutamate) Msed_0217 PWY-5188 tetrapyrrole biosynthesis I (from glutamate) Msed_0217 PWY-5189 tetrapyrrole biosynthesis II (from glycine) Msed_0218 PWY-5188 tetrapyrrole biosynthesis I (from glutamate) Msed_0218 PWY-5189 tetrapyrrole biosynthesis II (from glycine) Msed_0223 PWY-6749 CMP-legionaminate biosynthesis I Msed_0227 PWY-5686 UMP biosynthesis Msed_0228 PWY-7176 UTP and CTP de novo biosynthesis Msed_0228 PWY-7177 UTP and CTP dephosphorylation II Msed_0228 PWY-7185 UTP and CTP dephosphorylation I Msed_0231 PWY-5041 S-adenosyl-L-methionine cycle II Msed_0231 PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis Msed_0243 PWY-4041 γ-glutamyl cycle Msed_0243 PWY-5826 hypoglycin biosynthesis Msed_0279 PWY-5747 2-methylcitrate cycle II Msed_0290 PWY-3781 aerobic respiration I (cytochrome c) Msed_0290 PWY-4521 arsenite oxidation I (respiratory) Msed_0290 PWY-6692 Fe(II) oxidation Msed_0290 PWY-7279 aerobic respiration II (cytochrome c) (yeast) Msed_0324 PWY-3781 aerobic respiration I (cytochrome c) Msed_0324 PWY-4521 arsenite oxidation I (respiratory) Msed_0324 PWY-6692 Fe(II) oxidation Msed_0324 PWY-7279 aerobic respiration II (cytochrome c) (yeast) Msed_0356 PWY-5350 thiosulfate disproportionation III (rhodanese) Msed_0363 PWY-5303 thiosulfate oxidation II (via tetrathionate) Msed_0364 PWY-5303 thiosulfate oxidation II (via tetrathionate) Msed_0374 PWY-5303 thiosulfate oxidation II (via tetrathionate) Msed_0389 PWY-1361 benzoyl-CoA degradation I (aerobic) Msed_0389 PWY-5109 2-methylbutanoate biosynthesis Msed_0389 PWY-5136 fatty acid β-oxidation II (peroxisome) Msed_0389 PWY-5138 unsaturated, even numbered fatty acid β-oxidation Msed_0389 PWY-5177 glutaryl-CoA degradation Msed_0389 PWY-5789 3-hydroxypropanoate/4-hydroxybutanate cycle Msed_0389 PWY-6435 4-hydroxybenzoate biosynthesis V Msed_0389 PWY-6583 pyruvate fermentation to butanol I Msed_0389 PWY-6863 pyruvate fermentation to hexanol Msed_0389 PWY-6883 pyruvate fermentation to butanol II Msed_0389 PWY-6944 androstenedione degradation Msed_0389 PWY-6945 cholesterol degradation to androstenedione I (cholesterol oxidase) Msed_0389 PWY-6946 cholesterol degradation to androstenedione II (cholesterol dehydrogenase) Msed_0389 PWY-7007 methyl ketone biosynthesis Msed_0389 PWY-7046 4-coumarate degradation (anaerobic) Msed_0389 PWY-7094 fatty acid salvage Msed_0389 PWY-7216 (R)- and (S)-3-hydroxybutanoate biosynthesis Msed_0389 PWY-735 jasmonic acid biosynthesis Msed_0389 PWY-7401 crotonate fermentation (to acetate and cyclohexane carboxylate) Msed_0390 PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type Msed_0390 PWY-6142 gluconeogenesis II (Methanobacterium thermoautotrophicum) Msed_0390 PWY-7115 C4 photosynthetic carbon assimilation cycle, NAD-ME type Msed_0390 PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type Msed_0399 PWY-1361 benzoyl-CoA degradation I (aerobic) Msed_0399 PWY-5109 2-methylbutanoate biosynthesis Msed_0399 PWY-5136 fatty acid β-oxidation II (peroxisome) Msed_0399 PWY-5138 unsaturated, even numbered fatty acid β-oxidation Msed_0399 PWY-5177 glutaryl-CoA degradation Msed_0399 PWY-5789 3-hydroxypropanoate/4-hydroxybutanate cycle Msed_0399 PWY-6435 4-hydroxybenzoate biosynthesis V Msed_0399 PWY-6583 pyruvate fermentation to butanol I Msed_0399 PWY-6863 pyruvate fermentation to hexanol Msed_0399 PWY-6883 pyruvate fermentation to butanol II Msed_0399 PWY-6944 androstenedione degradation Msed_0399 PWY-6945 cholesterol degradation to androstenedione I (cholesterol oxidase) Msed_0399 PWY-6946 cholesterol degradation to androstenedione II (cholesterol dehydrogenase) Msed_0399 PWY-7007 methyl ketone biosynthesis Msed_0399 PWY-7046 4-coumarate degradation (anaerobic) Msed_0399 PWY-7094 fatty acid salvage Msed_0399 PWY-7216 (R)- and (S)-3-hydroxybutanoate biosynthesis Msed_0399 PWY-735 jasmonic acid biosynthesis Msed_0399 PWY-7401 crotonate fermentation (to acetate and cyclohexane carboxylate) Msed_0428 PWY-6785 hydrogen production VIII Msed_0436 PWY-6386 UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing) Msed_0436 PWY-6387 UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing) Msed_0484 PWY-3781 aerobic respiration I (cytochrome c) Msed_0484 PWY-4521 arsenite oxidation I (respiratory) Msed_0484 PWY-6692 Fe(II) oxidation Msed_0484 PWY-7279 aerobic respiration II (cytochrome c) (yeast) Msed_0485 PWY-3781 aerobic respiration I (cytochrome c) Msed_0485 PWY-4521 arsenite oxidation I (respiratory) Msed_0485 PWY-6692 Fe(II) oxidation Msed_0485 PWY-7279 aerobic respiration II (cytochrome c) (yeast) Msed_0497 PWY-40 putrescine biosynthesis I Msed_0497 PWY-6305 putrescine biosynthesis IV Msed_0515 PWY-6823 molybdenum cofactor biosynthesis Msed_0547 PWY-6703 preQ0 biosynthesis Msed_0552 PWY-6386 UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing) Msed_0552 PWY-6387 UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing) Msed_0553 PWY-6386 UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing) Msed_0553 PWY-6387 UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing) Msed_0564 PWY-6893 thiamin diphosphate biosynthesis II (Bacillus) Msed_0564 PWY-6894 thiamin diphosphate biosynthesis I (E. coli) Msed_0564 PWY-6897 thiamin salvage II Msed_0564 PWY-6907 thiamin diphosphate biosynthesis III (Staphylococcus) Msed_0564 PWY-6908 thiamin diphosphate biosynthesis IV (eukaryotes) Msed_0564 PWY-7353 4-methyl-5(β-hydroxyethyl)thiazole salvage (yeast) Msed_0564 PWY-7357 thiamin formation from pyrithiamine and oxythiamine (yeast) Msed_0570 PWY-3781 aerobic respiration I (cytochrome c) Msed_0570 PWY-4521 arsenite oxidation I (respiratory) Msed_0570 PWY-6692 Fe(II) oxidation Msed_0570 PWY-7279 aerobic respiration II (cytochrome c) (yeast) Msed_0602 PWY-381 nitrate reduction II (assimilatory) Msed_0602 PWY-5675 nitrate reduction V (assimilatory) Msed_0602 PWY-6549 L-glutamine biosynthesis III Msed_0602 PWY-6963 ammonia assimilation cycle I Msed_0602 PWY-6964 ammonia assimilation cycle II Msed_0603 PWY-6829 tRNA methylation (yeast) Msed_0603 PWY-7285 methylwyosine biosynthesis Msed_0603 PWY-7286 7-(3-amino-3-carboxypropyl)-wyosine biosynthesis Msed_0608 PWY-5194 siroheme biosynthesis Msed_0608 PWY-7377 cob(II)yrinate a,c-diamide biosynthesis I (early cobalt insertion) Msed_0612 PWY-6386 UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing) Msed_0612 PWY-6387 UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing) Msed_0613 PWY-6654 phosphopantothenate biosynthesis III Msed_0615 PWY-6654 phosphopantothenate biosynthesis III Msed_0623 PWY-6871 3-methylbutanol biosynthesis Msed_0624 PWY-6898 thiamin salvage III Msed_0624 PWY-6907 thiamin diphosphate biosynthesis III (Staphylococcus) Msed_0624 PWY-6908 thiamin diphosphate biosynthesis IV (eukaryotes) Msed_0638 PWY-5743 3-hydroxypropanoate cycle Msed_0638 PWY-5789 3-hydroxypropanoate/4-hydroxybutanate cycle Msed_0638 PWY-6728 methylaspartate cycle Msed_0638 PWY-7384 anaerobic energy metabolism (invertebrates, mitochondrial) Msed_0639 PWY-5743 3-hydroxypropanoate cycle Msed_0639 PWY-5789 3-hydroxypropanoate/4-hydroxybutanate cycle Msed_0639 PWY-6728 methylaspartate cycle Msed_0639 PWY-7384 anaerobic energy metabolism (invertebrates, mitochondrial) Msed_0645 PWY-6823 molybdenum cofactor biosynthesis Msed_0646 PWY-6893 thiamin diphosphate biosynthesis II (Bacillus) Msed_0646 PWY-6894 thiamin diphosphate biosynthesis I (E. coli) Msed_0646 PWY-6897 thiamin salvage II Msed_0646 PWY-6907 thiamin diphosphate biosynthesis III (Staphylococcus) Msed_0646 PWY-6908 thiamin diphosphate biosynthesis IV (eukaryotes) Msed_0646 PWY-6910 hydroxymethylpyrimidine salvage Msed_0646 PWY-7353 4-methyl-5(β-hydroxyethyl)thiazole salvage (yeast) Msed_0646 PWY-7356 thiamin salvage IV (yeast) Msed_0646 PWY-7357 thiamin formation from pyrithiamine and oxythiamine (yeast) Msed_0671 PWY-6823 molybdenum cofactor biosynthesis Msed_0672 PWY-702 L-methionine biosynthesis II Msed_0676 PWY-3781 aerobic respiration I (cytochrome c) Msed_0676 PWY-4302 aerobic respiration III (alternative oxidase pathway) Msed_0676 PWY-561 superpathway of glyoxylate cycle and fatty acid degradation Msed_0676 PWY-5690 TCA cycle II (plants and fungi) Msed_0676 PWY-6728 methylaspartate cycle Msed_0676 PWY-6969 TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase) Msed_0676 PWY-7254 TCA cycle VII (acetate-producers) Msed_0676 PWY-7279 aerobic respiration II (cytochrome c) (yeast) Msed_0677 PWY-3781 aerobic respiration I (cytochrome c) Msed_0677 PWY-4302 aerobic respiration III (alternative oxidase pathway) Msed_0677 PWY-561 superpathway of glyoxylate cycle and fatty acid degradation Msed_0677 PWY-5690 TCA cycle II (plants and fungi) Msed_0677 PWY-6728 methylaspartate cycle Msed_0677 PWY-6969 TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase) Msed_0677 PWY-7254 TCA cycle VII (acetate-producers) Msed_0677 PWY-7279 aerobic respiration II (cytochrome c) (yeast) Msed_0700 PWY-7158 L-phenylalanine degradation V Msed_0709 PWY-2941 L-lysine biosynthesis II Msed_0709 PWY-2942 L-lysine biosynthesis III Msed_0709 PWY-5097 L-lysine biosynthesis VI Msed_0709 PWY-5154 L-arginine biosynthesis III (via N-acetyl-L-citrulline) Msed_0709 PWY-6559 spermidine biosynthesis II Msed_0709 PWY-6562 norspermidine biosynthesis Msed_0709 PWY-7153 grixazone biosynthesis Msed_0709 PWY-7400 L-arginine biosynthesis IV (archaebacteria) Msed_0711 PWY-5101 L-isoleucine biosynthesis II Msed_0711 PWY-5103 L-isoleucine biosynthesis III Msed_0711 PWY-5104 L-isoleucine biosynthesis IV Msed_0711 PWY-7111 pyruvate fermentation to isobutanol (engineered) Msed_0721 PWY-6545 pyrimidine deoxyribonucleotides de novo biosynthesis III Msed_0721 PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I Msed_0721 PWY-7185 UTP and CTP dephosphorylation I Msed_0721 PWY-7198 pyrimidine deoxyribonucleotides de novo biosynthesis IV Msed_0721 PWY-7210 pyrimidine deoxyribonucleotides biosynthesis from CTP Msed_0727 PWY-6386 UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing) Msed_0727 PWY-6387 UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing) Msed_0735 PWY-5508 adenosylcobalamin biosynthesis from cobyrinate a,c-diamide II Msed_0735 PWY-5509 adenosylcobalamin biosynthesis from cobyrinate a,c-diamide I Msed_0735 PWY-6269 adenosylcobalamin salvage from cobinamide II Msed_0740 PWY-5083 NAD/NADH phosphorylation and dephosphorylation Msed_0740 PWY-7268 NAD/NADP-NADH/NADPH cytosolic interconversion (yeast) Msed_0740 PWY-7269 NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast) Msed_0743 PWY-101 photosynthesis light reactions Msed_0743 PWY-7230 ubiquinol-6 biosynthesis from 4-aminobenzoate (eukaryotic) Msed_0744 PWY-6829 tRNA methylation (yeast) Msed_0744 PWY-7285 methylwyosine biosynthesis Msed_0744 PWY-7286 7-(3-amino-3-carboxypropyl)-wyosine biosynthesis Msed_0755 PWY-5921 glutaminyl-tRNAgln biosynthesis via transamidation Msed_0756 PWY-1622 formaldehyde assimilation I (serine pathway) Msed_0756 PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type Msed_0756 PWY-5913 TCA cycle VI (obligate autotrophs) Msed_0756 PWY-6142 gluconeogenesis II (Methanobacterium thermoautotrophicum) Msed_0756 PWY-6146 Methanobacterium thermoautotrophicum biosynthetic metabolism Msed_0756 PWY-6549 L-glutamine biosynthesis III Msed_0756 PWY-7115 C4 photosynthetic carbon assimilation cycle, NAD-ME type Msed_0756 PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type Msed_0756 PWY-7124 ethylene biosynthesis V (engineered) Msed_0758 PWY-6938 NADH repair Msed_0790 PWY-5129 sphingolipid biosynthesis (plants) Msed_0828 PWY-6832 2-aminoethylphosphonate degradation II Msed_0874 PWY-4981 L-proline biosynthesis II (from arginine) Msed_0880 PWY-6683 sulfate reduction III (assimilatory) Msed_0887 PWY-5704 urea degradation II Msed_0888 PWY-5704 urea degradation II Msed_0906 PWY-6890 4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis Msed_0960 PWY-5194 siroheme biosynthesis Msed_0960 PWY-7377 cob(II)yrinate a,c-diamide biosynthesis I (early cobalt insertion) Msed_0961 PWY-6683 sulfate reduction III (assimilatory) Msed_0963 PWY-5278 sulfite oxidation III Msed_0963 PWY-5340 sulfate activation for sulfonation Msed_0963 PWY-6683 sulfate reduction III (assimilatory) Msed_0963 PWY-6932 selenate reduction Msed_0977 PWY-3341 L-proline biosynthesis III Msed_0977 PWY-4981 L-proline biosynthesis II (from arginine) Msed_0977 PWY-6344 L-ornithine degradation II (Stickland reaction) Msed_0980 PWY-6545 pyrimidine deoxyribonucleotides de novo biosynthesis III Msed_0980 PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I Msed_0980 PWY-7187 pyrimidine deoxyribonucleotides de novo biosynthesis II Msed_0980 PWY-7197 pyrimidine deoxyribonucleotide phosphorylation Msed_0980 PWY-7198 pyrimidine deoxyribonucleotides de novo biosynthesis IV Msed_0980 PWY-7210 pyrimidine deoxyribonucleotides biosynthesis from CTP Msed_0991 PWY-5451 acetone degradation I (to methylglyoxal) Msed_0991 PWY-6588 pyruvate fermentation to acetone Msed_0991 PWY-6876 isopropanol biosynthesis Msed_0991 PWY-7466 acetone degradation III (to propane-1,2-diol) Msed_0995 PWY-5386 methylglyoxal degradation I Msed_1042 PWY-6728 methylaspartate cycle Msed_1042 PWY-6969 TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase) Msed_1042 PWY-7118 chitin degradation to ethanol Msed_1042 PWY-7294 xylose degradation IV Msed_1042 PWY-7295 L-arabinose degradation IV Msed_1052 PWY-7533 gliotoxin biosynthesis Msed_1076 PWY-5943 β-carotene biosynthesis Msed_1076 PWY-5947 lutein biosynthesis Msed_1088 PWY-7425 2-chloroacrylate degradation I Msed_1114 PWY-3781 aerobic respiration I (cytochrome c) Msed_1114 PWY-4302 aerobic respiration III (alternative oxidase pathway) Msed_1114 PWY-561 superpathway of glyoxylate cycle and fatty acid degradation Msed_1114 PWY-5690 TCA cycle II (plants and fungi) Msed_1114 PWY-6728 methylaspartate cycle Msed_1114 PWY-6969 TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase) Msed_1114 PWY-7254 TCA cycle VII (acetate-producers) Msed_1114 PWY-7279 aerobic respiration II (cytochrome c) (yeast) Msed_1118 PWY-6386 UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing) Msed_1118 PWY-6387 UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing) Msed_1177 PWY-4261 glycerol degradation I Msed_1177 PWY-6118 glycerol-3-phosphate shuttle Msed_1177 PWY-6952 glycerophosphodiester degradation Msed_1226 PWY-5508 adenosylcobalamin biosynthesis from cobyrinate a,c-diamide II Msed_1226 PWY-5523 5,6-dimethylbenzimidazole biosynthesis Msed_1237 PWY-5839 menaquinol-7 biosynthesis Msed_1237 PWY-5844 menaquinol-9 biosynthesis Msed_1237 PWY-5849 menaquinol-6 biosynthesis Msed_1237 PWY-5890 menaquinol-10 biosynthesis Msed_1237 PWY-5891 menaquinol-11 biosynthesis Msed_1237 PWY-5892 menaquinol-12 biosynthesis Msed_1237 PWY-5895 menaquinol-13 biosynthesis Msed_1268 PWY-5083 NAD/NADH phosphorylation and dephosphorylation Msed_1268 PWY-7268 NAD/NADP-NADH/NADPH cytosolic interconversion (yeast) Msed_1268 PWY-7269 NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast) Msed_1302 PWY-6823 molybdenum cofactor biosynthesis Msed_1310 PWY-5651 L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde Msed_1310 PWY-6309 L-tryptophan degradation XI (mammalian, via kynurenine) Msed_1318 PWY-1881 formate oxidation to CO2 Msed_1318 PWY-5497 purine nucleobases degradation II (anaerobic) Msed_1318 PWY-6696 oxalate degradation III Msed_1350 PWY-6185 4-methylcatechol degradation (ortho cleavage) Msed_1351 PWY-6899 base-degraded thiamin salvage Msed_1351 PWY-7356 thiamin salvage IV (yeast) Msed_1353 PWY-6672 cis-genanyl-CoA degradation Msed_1353 PWY-7118 chitin degradation to ethanol Msed_1364 PWY-7221 guanosine ribonucleotides de novo biosynthesis Msed_1375 PWY-4381 fatty acid biosynthesis initiation I Msed_1375 PWY-5743 3-hydroxypropanoate cycle Msed_1375 PWY-5744 glyoxylate assimilation Msed_1375 PWY-5789 3-hydroxypropanoate/4-hydroxybutanate cycle Msed_1375 PWY-6679 jadomycin biosynthesis Msed_1375 PWY-7388 octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) Msed_1399 PWY-5392 reductive TCA cycle II Msed_1399 PWY-5537 pyruvate fermentation to acetate V Msed_1399 PWY-5538 pyruvate fermentation to acetate VI Msed_1399 PWY-5690 TCA cycle II (plants and fungi) Msed_1399 PWY-5913 TCA cycle VI (obligate autotrophs) Msed_1399 PWY-6728 methylaspartate cycle Msed_1399 PWY-6969 TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase) Msed_1399 PWY-7384 anaerobic energy metabolism (invertebrates, mitochondrial) Msed_1406 PWY-6167 flavin biosynthesis II (archaea) Msed_1412 PWY-1042 glycolysis IV (plant cytosol) Msed_1412 PWY-2221 Entner-Doudoroff pathway III (semi-phosphorylative) Msed_1412 PWY-5484 glycolysis II (from fructose 6-phosphate) Msed_1412 PWY-5723 Rubisco shunt Msed_1412 PWY-6142 gluconeogenesis II (Methanobacterium thermoautotrophicum) Msed_1412 PWY-6886 1-butanol autotrophic biosynthesis Msed_1412 PWY-6901 superpathway of glucose and xylose degradation Msed_1412 PWY-7003 glycerol degradation to butanol Msed_1412 PWY-7218 photosynthetic 3-hydroxybutanoate biosynthesis (engineered) Msed_1412 PWY-7383 anaerobic energy metabolism (invertebrates, cytosol) Msed_1417 PWY-622 starch biosynthesis Msed_1421 PWY-5941 glycogen degradation II (eukaryotic) Msed_1421 PWY-6724 starch degradation II Msed_1421 PWY-6737 starch degradation V Msed_1421 PWY-7238 sucrose biosynthesis II Msed_1423 PWY-1361 benzoyl-CoA degradation I (aerobic) Msed_1423 PWY-5109 2-methylbutanoate biosynthesis Msed_1423 PWY-5136 fatty acid β-oxidation II (peroxisome) Msed_1423 PWY-5138 unsaturated, even numbered fatty acid β-oxidation Msed_1423 PWY-5177 glutaryl-CoA degradation Msed_1423 PWY-5789 3-hydroxypropanoate/4-hydroxybutanate cycle Msed_1423 PWY-6435 4-hydroxybenzoate biosynthesis V Msed_1423 PWY-6583 pyruvate fermentation to butanol I Msed_1423 PWY-6863 pyruvate fermentation to hexanol Msed_1423 PWY-6883 pyruvate fermentation to butanol II Msed_1423 PWY-6944 androstenedione degradation Msed_1423 PWY-6945 cholesterol degradation to androstenedione I (cholesterol oxidase) Msed_1423 PWY-6946 cholesterol degradation to androstenedione II (cholesterol dehydrogenase) Msed_1423 PWY-7007 methyl ketone biosynthesis Msed_1423 PWY-7046 4-coumarate degradation (anaerobic) Msed_1423 PWY-7094 fatty acid salvage Msed_1423 PWY-7216 (R)- and (S)-3-hydroxybutanoate biosynthesis Msed_1423 PWY-735 jasmonic acid biosynthesis Msed_1423 PWY-7401 crotonate fermentation (to acetate and cyclohexane carboxylate) Msed_1448 PWY-6123 inosine-5'-phosphate biosynthesis I Msed_1448 PWY-7234 inosine-5'-phosphate biosynthesis III Msed_1451 PWY-1042 glycolysis IV (plant cytosol) Msed_1451 PWY-5484 glycolysis II (from fructose 6-phosphate) Msed_1451 PWY-6142 gluconeogenesis II (Methanobacterium thermoautotrophicum) Msed_1451 PWY-6891 thiazole biosynthesis II (Bacillus) Msed_1451 PWY-6892 thiazole biosynthesis I (E. coli) Msed_1451 PWY-7003 glycerol degradation to butanol Msed_1452 PWY-7383 anaerobic energy metabolism (invertebrates, cytosol) Msed_1456 PWY-6672 cis-genanyl-CoA degradation Msed_1456 PWY-7118 chitin degradation to ethanol Msed_1457 PWY-1881 formate oxidation to CO2 Msed_1457 PWY-5497 purine nucleobases degradation II (anaerobic) Msed_1457 PWY-6696 oxalate degradation III Msed_1462 PWY-5392 reductive TCA cycle II Msed_1462 PWY-561 superpathway of glyoxylate cycle and fatty acid degradation Msed_1462 PWY-5690 TCA cycle II (plants and fungi) Msed_1462 PWY-5913 TCA cycle VI (obligate autotrophs) Msed_1462 PWY-6728 methylaspartate cycle Msed_1462 PWY-6969 TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase) Msed_1462 PWY-7254 TCA cycle VII (acetate-producers) Msed_1462 PWY-7384 anaerobic energy metabolism (invertebrates, mitochondrial) Msed_1463 PWY-6386 UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing) Msed_1463 PWY-6387 UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing) Msed_1469 PWY-6829 tRNA methylation (yeast) Msed_1469 PWY-7285 methylwyosine biosynthesis Msed_1469 PWY-7286 7-(3-amino-3-carboxypropyl)-wyosine biosynthesis Msed_1480 PWY-6987 lipoate biosynthesis and incorporation III (Bacillus) Msed_1480 PWY-7381 lipoate biosynthesis and incorporation (glycine cleavage system, yeast) Msed_1506 PWY-6987 lipoate biosynthesis and incorporation III (Bacillus) Msed_1506 PWY-7381 lipoate biosynthesis and incorporation (glycine cleavage system, yeast) Msed_1560 PWY-6987 lipoate biosynthesis and incorporation III (Bacillus) Msed_1560 PWY-7381 lipoate biosynthesis and incorporation (glycine cleavage system, yeast) Msed_1568 PWY-6703 preQ0 biosynthesis Msed_1575 PWY-3821 galactose degradation III Msed_1575 PWY-6317 galactose degradation I (Leloir pathway) Msed_1575 PWY-6527 stachyose degradation Msed_1576 PWY-7391 isoprene biosynthesis II (engineered) Msed_1576 PWY-922 mevalonate pathway I Msed_1578 PWY-4202 arsenate detoxification I (glutaredoxin) Msed_1578 PWY-5695 urate biosynthesis/inosine 5'-phosphate degradation Msed_1578 PWY-6608 guanosine nucleotides degradation III Msed_1578 PWY-6609 adenine and adenosine salvage III Msed_1578 PWY-6611 adenine and adenosine salvage V Msed_1578 PWY-6620 guanine and guanosine salvage Msed_1578 PWY-6627 salinosporamide A biosynthesis Msed_1578 PWY-6644 fluoroacetate and fluorothreonine biosynthesis Msed_1578 PWY-7179 purine deoxyribonucleosides degradation I Msed_1578 PWY-7179-1 purine deoxyribonucleosides degradation Msed_1581 PWY-5392 reductive TCA cycle II Msed_1581 PWY-5537 pyruvate fermentation to acetate V Msed_1581 PWY-5538 pyruvate fermentation to acetate VI Msed_1581 PWY-5690 TCA cycle II (plants and fungi) Msed_1581 PWY-5913 TCA cycle VI (obligate autotrophs) Msed_1581 PWY-6728 methylaspartate cycle Msed_1581 PWY-6969 TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase) Msed_1581 PWY-7384 anaerobic energy metabolism (invertebrates, mitochondrial) Msed_1582 PWY-5392 reductive TCA cycle II Msed_1582 PWY-5537 pyruvate fermentation to acetate V Msed_1582 PWY-5538 pyruvate fermentation to acetate VI Msed_1582 PWY-5690 TCA cycle II (plants and fungi) Msed_1582 PWY-5913 TCA cycle VI (obligate autotrophs) Msed_1582 PWY-6728 methylaspartate cycle Msed_1582 PWY-6969 TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase) Msed_1582 PWY-7384 anaerobic energy metabolism (invertebrates, mitochondrial) Msed_1584 PWY-5265 peptidoglycan biosynthesis II (staphylococci) Msed_1584 PWY-6385 peptidoglycan biosynthesis III (mycobacteria) Msed_1584 PWY-6470 peptidoglycan biosynthesis V (β-lactam resistance) Msed_1584 PWY-6471 peptidoglycan biosynthesis IV (Enterococcus faecium) Msed_1594 PWY-5508 adenosylcobalamin biosynthesis from cobyrinate a,c-diamide II Msed_1594 PWY-5509 adenosylcobalamin biosynthesis from cobyrinate a,c-diamide I Msed_1594 PWY-6268 adenosylcobalamin salvage from cobalamin Msed_1594 PWY-6269 adenosylcobalamin salvage from cobinamide II Msed_1602 PWY-3821 galactose degradation III Msed_1602 PWY-6174 mevalonate pathway II (archaea) Msed_1602 PWY-6317 galactose degradation I (Leloir pathway) Msed_1602 PWY-6527 stachyose degradation Msed_1602 PWY-7391 isoprene biosynthesis II (engineered) Msed_1602 PWY-922 mevalonate pathway I Msed_1603 PWY-6749 CMP-legionaminate biosynthesis I Msed_1609 PWY-6823 molybdenum cofactor biosynthesis Msed_1611 PWY-5663 tetrahydrobiopterin biosynthesis I Msed_1611 PWY-5664 tetrahydrobiopterin biosynthesis II Msed_1611 PWY-6147 6-hydroxymethyl-dihydropterin diphosphate biosynthesis I Msed_1611 PWY-6703 preQ0 biosynthesis Msed_1611 PWY-6983 tetrahydrobiopterin biosynthesis III Msed_1611 PWY-7442 drosopterin and aurodrosopterin biosynthesis Msed_1612 PWY-381 nitrate reduction II (assimilatory) Msed_1612 PWY-5675 nitrate reduction V (assimilatory) Msed_1612 PWY-6549 L-glutamine biosynthesis III Msed_1612 PWY-6963 ammonia assimilation cycle I Msed_1612 PWY-6964 ammonia assimilation cycle II Msed_1616 PWY-6148 tetrahydromethanopterin biosynthesis Msed_1623 PWY-5381 pyridine nucleotide cycling (plants) Msed_1645 PWY-40 putrescine biosynthesis I Msed_1645 PWY-43 putrescine biosynthesis II Msed_1645 PWY-6305 putrescine biosynthesis IV Msed_1645 PWY-6834 spermidine biosynthesis III Msed_1646 PWY-4381 fatty acid biosynthesis initiation I Msed_1649 PWY-6174 mevalonate pathway II (archaea) Msed_1649 PWY-7391 isoprene biosynthesis II (engineered) Msed_1649 PWY-7524 mevalonate pathway III (archaea) Msed_1649 PWY-922 mevalonate pathway I Msed_1650 PWY-1622 formaldehyde assimilation I (serine pathway) Msed_1650 PWY-181 photorespiration Msed_1650 PWY-2161 folate polyglutamylation Msed_1650 PWY-2201 folate transformations I Msed_1650 PWY-3661 glycine betaine degradation I Msed_1650 PWY-3661-1 glycine betaine degradation II (mammalian) Msed_1650 PWY-3841 folate transformations II Msed_1650 PWY-5497 purine nucleobases degradation II (anaerobic) Msed_1653 PWY-1042 glycolysis IV (plant cytosol) Msed_1653 PWY-5484 glycolysis II (from fructose 6-phosphate) Msed_1653 PWY-6886 1-butanol autotrophic biosynthesis Msed_1653 PWY-6901 superpathway of glucose and xylose degradation Msed_1653 PWY-7003 glycerol degradation to butanol Msed_1668 PWY-1042 glycolysis IV (plant cytosol) Msed_1668 PWY-1622 formaldehyde assimilation I (serine pathway) Msed_1668 PWY-2221 Entner-Doudoroff pathway III (semi-phosphorylative) Msed_1668 PWY-5484 glycolysis II (from fructose 6-phosphate) Msed_1668 PWY-5723 Rubisco shunt Msed_1668 PWY-6142 gluconeogenesis II (Methanobacterium thermoautotrophicum) Msed_1668 PWY-6886 1-butanol autotrophic biosynthesis Msed_1668 PWY-6901 superpathway of glucose and xylose degradation Msed_1668 PWY-7003 glycerol degradation to butanol Msed_1668 PWY-7124 ethylene biosynthesis V (engineered) Msed_1668 PWY-7218 photosynthetic 3-hydroxybutanoate biosynthesis (engineered) Msed_1674 PWY-6832 2-aminoethylphosphonate degradation II Msed_1675 PWY-5041 S-adenosyl-L-methionine cycle II Msed_1686 PWY-5958 acridone alkaloid biosynthesis Msed_1686 PWY-6660 2-heptyl-3-hydroxy-4(1H)-quinolone biosynthesis Msed_1686 PWY-6661 4-hydroxy-2(1H)-quinolone biosynthesis Msed_1687 PWY-5958 acridone alkaloid biosynthesis Msed_1687 PWY-6660 2-heptyl-3-hydroxy-4(1H)-quinolone biosynthesis Msed_1687 PWY-6661 4-hydroxy-2(1H)-quinolone biosynthesis Msed_1693 PWY-2301 myo-inositol biosynthesis Msed_1693 PWY-4661 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) Msed_1693 PWY-6372 1D-myo-inositol hexakisphosphate biosynthesis IV (Dictyostelium) Msed_1693 PWY-6580 phosphatidylinositol biosynthesis I (bacteria) Msed_1693 PWY-6664 di-myo-inositol phosphate biosynthesis Msed_1694 PWY-5484 glycolysis II (from fructose 6-phosphate) Msed_1699 PWY-2941 L-lysine biosynthesis II Msed_1699 PWY-2942 L-lysine biosynthesis III Msed_1699 PWY-5097 L-lysine biosynthesis VI Msed_1699 PWY-6559 spermidine biosynthesis II Msed_1699 PWY-6562 norspermidine biosynthesis Msed_1699 PWY-7153 grixazone biosynthesis Msed_1700 PWY-2941 L-lysine biosynthesis II Msed_1700 PWY-2942 L-lysine biosynthesis III Msed_1700 PWY-5097 L-lysine biosynthesis VI Msed_1700 PWY-5154 L-arginine biosynthesis III (via N-acetyl-L-citrulline) Msed_1700 PWY-6559 spermidine biosynthesis II Msed_1700 PWY-6562 norspermidine biosynthesis Msed_1700 PWY-7153 grixazone biosynthesis Msed_1700 PWY-7400 L-arginine biosynthesis IV (archaebacteria) Msed_1703 PWY-4981 L-proline biosynthesis II (from arginine) Msed_1703 PWY-4984 urea cycle Msed_1703 PWY-7400 L-arginine biosynthesis IV (archaebacteria) Msed_1705 PWY-5083 NAD/NADH phosphorylation and dephosphorylation Msed_1705 PWY-7268 NAD/NADP-NADH/NADPH cytosolic interconversion (yeast) Msed_1705 PWY-7269 NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast) Msed_1716 PWY-6545 pyrimidine deoxyribonucleotides de novo biosynthesis III Msed_1716 PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I Msed_1716 PWY-7198 pyrimidine deoxyribonucleotides de novo biosynthesis IV Msed_1716 PWY-7210 pyrimidine deoxyribonucleotides biosynthesis from CTP Msed_1716 PWY-7220 adenosine deoxyribonucleotides de novo biosynthesis II Msed_1716 PWY-7222 guanosine deoxyribonucleotides de novo biosynthesis II Msed_1716 PWY-7226 guanosine deoxyribonucleotides de novo biosynthesis I Msed_1716 PWY-7227 adenosine deoxyribonucleotides de novo biosynthesis Msed_1726 PWY-6829 tRNA methylation (yeast) Msed_1735 PWY-6482 diphthamide biosynthesis (archaea) Msed_1737 PWY-6167 flavin biosynthesis II (archaea) Msed_1738 PWY-7285 methylwyosine biosynthesis Msed_1738 PWY-7286 7-(3-amino-3-carboxypropyl)-wyosine biosynthesis Msed_1739 PWY-5921 glutaminyl-tRNAgln biosynthesis via transamidation Msed_1765 PWY-3081 L-lysine biosynthesis V Msed_1765 PWY-6871 3-methylbutanol biosynthesis Msed_1775 PWY-5386 methylglyoxal degradation I Msed_1810 PWY-7346 UDP-α-D-glucuronate biosynthesis (from UDP-glucose) Msed_1821 PWY-6386 UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing) Msed_1821 PWY-6387 UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing) Msed_1845 PWY-5514 UDP-N-acetyl-D-galactosamine biosynthesis II Msed_1850 PWY-3221 dTDP-L-rhamnose biosynthesis II Msed_1850 PWY-6808 dTDP-D-forosamine biosynthesis Msed_1850 PWY-6942 dTDP-D-desosamine biosynthesis Msed_1850 PWY-6953 dTDP-3-acetamido-3,6-dideoxy-α-D-galactose biosynthesis Msed_1850 PWY-6973 dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis Msed_1850 PWY-6974 dTDP-L-olivose biosynthesis Msed_1850 PWY-6976 dTDP-L-mycarose biosynthesis Msed_1850 PWY-7104 dTDP-L-megosamine biosynthesis Msed_1850 PWY-7301 dTDP-β-L-noviose biosynthesis Msed_1850 PWY-7312 dTDP-D-β-fucofuranose biosynthesis Msed_1850 PWY-7315 dTDP-N-acetylthomosamine biosynthesis Msed_1850 PWY-7316 dTDP-N-acetylviosamine biosynthesis Msed_1850 PWY-7318 dTDP-3-acetamido-3,6-dideoxy-α-D-glucose biosynthesis Msed_1850 PWY-7413 dTDP-6-deoxy-α-D-allose biosynthesis Msed_1850 PWY-7414 dTDP-α-D-mycaminose biosynthesis Msed_1850 PWY-7440 dTDP-β-L-4-epi-vancosamine biosynthesis Msed_1856 PWY-3801 sucrose degradation II (sucrose synthase) Msed_1856 PWY-3861 mannitol degradation II Msed_1856 PWY-3881 mannitol biosynthesis Msed_1856 PWY-5054 sorbitol biosynthesis I Msed_1856 PWY-5384 sucrose degradation IV (sucrose phosphorylase) Msed_1856 PWY-5514 UDP-N-acetyl-D-galactosamine biosynthesis II Msed_1856 PWY-5659 GDP-mannose biosynthesis Msed_1856 PWY-6142 gluconeogenesis II (Methanobacterium thermoautotrophicum) Msed_1856 PWY-621 sucrose degradation III (sucrose invertase) Msed_1856 PWY-622 starch biosynthesis Msed_1856 PWY-6531 mannitol cycle Msed_1856 PWY-6981 chitin biosynthesis Msed_1856 PWY-7238 sucrose biosynthesis II Msed_1856 PWY-7347 sucrose biosynthesis III Msed_1856 PWY-7385 1,3-propanediol biosynthesis (engineered) Msed_1856 PWY-7456 mannan degradation Msed_1856 PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) Msed_1864 PWY-6482 diphthamide biosynthesis (archaea) Msed_1864 PWY-7546 diphthamide biosynthesis (eukaryotes) Msed_1870 PWY-6163 chorismate biosynthesis from 3-dehydroquinate Msed_1870 PWY-6416 quinate degradation II Msed_1870 PWY-6707 gallate biosynthesis Msed_1871 PWY-6163 chorismate biosynthesis from 3-dehydroquinate Msed_1872 PWY-6163 chorismate biosynthesis from 3-dehydroquinate Msed_1873 PWY-6163 chorismate biosynthesis from 3-dehydroquinate Msed_1874 PWY-6163 chorismate biosynthesis from 3-dehydroquinate Msed_1875 PWY-6164 3-dehydroquinate biosynthesis I Msed_1876 PWY-1269 CMP-3-deoxy-D-manno-octulosonate biosynthesis I Msed_1876 PWY-5111 CMP-3-deoxy-D-manno-octulosonate biosynthesis II (from D-arabinose 5-phosphate) Msed_1876 PWY-6164 3-dehydroquinate biosynthesis I Msed_1877 PWY-3461 L-tyrosine biosynthesis II Msed_1877 PWY-3462 L-phenylalanine biosynthesis II Msed_1877 PWY-6120 L-tyrosine biosynthesis III Msed_1877 PWY-6627 salinosporamide A biosynthesis Msed_1879 PWY-6891 thiazole biosynthesis II (Bacillus) Msed_1879 PWY-6892 thiazole biosynthesis I (E. coli) Msed_1879 PWY-7560 methylerythritol phosphate pathway II Msed_1889 PWY-6854 ethylene biosynthesis III (microbes) Msed_1894 PWY-6545 pyrimidine deoxyribonucleotides de novo biosynthesis III Msed_1904 PWY-2301 myo-inositol biosynthesis Msed_1904 PWY-4661 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) Msed_1904 PWY-6372 1D-myo-inositol hexakisphosphate biosynthesis IV (Dictyostelium) Msed_1904 PWY-6580 phosphatidylinositol biosynthesis I (bacteria) Msed_1904 PWY-6664 di-myo-inositol phosphate biosynthesis Msed_1917 PWY-7219 adenosine ribonucleotides de novo biosynthesis Msed_1918 PWY-7219 adenosine ribonucleotides de novo biosynthesis Msed_1923 PWY-6466 pyridoxal 5'-phosphate biosynthesis II Msed_1924 PWY-6466 pyridoxal 5'-phosphate biosynthesis II Msed_1927 PWY-5101 L-isoleucine biosynthesis II Msed_1927 PWY-5103 L-isoleucine biosynthesis III Msed_1927 PWY-5104 L-isoleucine biosynthesis IV Msed_1927 PWY-7111 pyruvate fermentation to isobutanol (engineered) Msed_1929 PWY-5101 L-isoleucine biosynthesis II Msed_1929 PWY-5103 L-isoleucine biosynthesis III Msed_1929 PWY-5104 L-isoleucine biosynthesis IV Msed_1929 PWY-5938 (R)-acetoin biosynthesis I Msed_1929 PWY-5939 (R)-acetoin biosynthesis II Msed_1929 PWY-6389 (S)-acetoin biosynthesis Msed_1929 PWY-7111 pyruvate fermentation to isobutanol (engineered) Msed_1933 PWY-6349 CDP-archaeol biosynthesis Msed_1936 PWY-6834 spermidine biosynthesis III Msed_1939 PWY-5508 adenosylcobalamin biosynthesis from cobyrinate a,c-diamide II Msed_1939 PWY-5509 adenosylcobalamin biosynthesis from cobyrinate a,c-diamide I Msed_1939 PWY-6268 adenosylcobalamin salvage from cobalamin Msed_1939 PWY-6269 adenosylcobalamin salvage from cobinamide II Msed_1952 PWY-6281 L-selenocysteine biosynthesis II (archaea and eukaryotes) Msed_1961 PWY-5686 UMP biosynthesis Msed_1964 PWY-5686 UMP biosynthesis Msed_1965 PWY-5686 UMP biosynthesis Msed_1966 PWY-5686 UMP biosynthesis Msed_1973 PWY-7286 7-(3-amino-3-carboxypropyl)-wyosine biosynthesis Msed_1974 PWY-6703 preQ0 biosynthesis Msed_1977 PWY-6123 inosine-5'-phosphate biosynthesis I Msed_1977 PWY-6124 inosine-5'-phosphate biosynthesis II Msed_1977 PWY-7234 inosine-5'-phosphate biosynthesis III Msed_1978 PWY-6121 5-aminoimidazole ribonucleotide biosynthesis I Msed_1978 PWY-6122 5-aminoimidazole ribonucleotide biosynthesis II Msed_1978 PWY-6277 superpathway of 5-aminoimidazole ribonucleotide biosynthesis Msed_1979 PWY-6121 5-aminoimidazole ribonucleotide biosynthesis I Msed_1979 PWY-6122 5-aminoimidazole ribonucleotide biosynthesis II Msed_1979 PWY-6277 superpathway of 5-aminoimidazole ribonucleotide biosynthesis Msed_1980 PWY-6121 5-aminoimidazole ribonucleotide biosynthesis I Msed_1980 PWY-6122 5-aminoimidazole ribonucleotide biosynthesis II Msed_1980 PWY-6277 superpathway of 5-aminoimidazole ribonucleotide biosynthesis Msed_1981 PWY-6121 5-aminoimidazole ribonucleotide biosynthesis I Msed_1981 PWY-6122 5-aminoimidazole ribonucleotide biosynthesis II Msed_1981 PWY-6277 superpathway of 5-aminoimidazole ribonucleotide biosynthesis Msed_1981 PWY-7282 4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast) Msed_1983 PWY-6121 5-aminoimidazole ribonucleotide biosynthesis I Msed_1983 PWY-6122 5-aminoimidazole ribonucleotide biosynthesis II Msed_1983 PWY-6277 superpathway of 5-aminoimidazole ribonucleotide biosynthesis Msed_1984 PWY-6121 5-aminoimidazole ribonucleotide biosynthesis I Msed_1984 PWY-6122 5-aminoimidazole ribonucleotide biosynthesis II Msed_1984 PWY-6277 superpathway of 5-aminoimidazole ribonucleotide biosynthesis Msed_1987 PWY-4983 L-citrulline-nitric oxide cycle Msed_1987 PWY-4984 urea cycle Msed_1987 PWY-5 canavanine biosynthesis Msed_1987 PWY-5154 L-arginine biosynthesis III (via N-acetyl-L-citrulline) Msed_1987 PWY-7400 L-arginine biosynthesis IV (archaebacteria) Msed_1988 PWY-4983 L-citrulline-nitric oxide cycle Msed_1988 PWY-4984 urea cycle Msed_1988 PWY-5 canavanine biosynthesis Msed_1988 PWY-5154 L-arginine biosynthesis III (via N-acetyl-L-citrulline) Msed_1988 PWY-7400 L-arginine biosynthesis IV (archaebacteria) Msed_1989 PWY-5154 L-arginine biosynthesis III (via N-acetyl-L-citrulline) Msed_1989 PWY-5686 UMP biosynthesis Msed_1989 PWY-7400 L-arginine biosynthesis IV (archaebacteria) Msed_1990 PWY-5154 L-arginine biosynthesis III (via N-acetyl-L-citrulline) Msed_1990 PWY-5686 UMP biosynthesis Msed_1990 PWY-7400 L-arginine biosynthesis IV (archaebacteria) Msed_1993 PWY-1361 benzoyl-CoA degradation I (aerobic) Msed_1993 PWY-5109 2-methylbutanoate biosynthesis Msed_1993 PWY-5136 fatty acid β-oxidation II (peroxisome) Msed_1993 PWY-5138 unsaturated, even numbered fatty acid β-oxidation Msed_1993 PWY-5177 glutaryl-CoA degradation Msed_1993 PWY-5789 3-hydroxypropanoate/4-hydroxybutanate cycle Msed_1993 PWY-6435 4-hydroxybenzoate biosynthesis V Msed_1993 PWY-6583 pyruvate fermentation to butanol I Msed_1993 PWY-6863 pyruvate fermentation to hexanol Msed_1993 PWY-6883 pyruvate fermentation to butanol II Msed_1993 PWY-6944 androstenedione degradation Msed_1993 PWY-6945 cholesterol degradation to androstenedione I (cholesterol oxidase) Msed_1993 PWY-6946 cholesterol degradation to androstenedione II (cholesterol dehydrogenase) Msed_1993 PWY-7007 methyl ketone biosynthesis Msed_1993 PWY-7046 4-coumarate degradation (anaerobic) Msed_1993 PWY-7094 fatty acid salvage Msed_1993 PWY-7216 (R)- and (S)-3-hydroxybutanoate biosynthesis Msed_1993 PWY-735 jasmonic acid biosynthesis Msed_1993 PWY-7401 crotonate fermentation (to acetate and cyclohexane carboxylate) Msed_2010 PWY-6987 lipoate biosynthesis and incorporation III (Bacillus) Msed_2010 PWY-7381 lipoate biosynthesis and incorporation (glycine cleavage system, yeast) Msed_2023 PWY-6823 molybdenum cofactor biosynthesis Msed_2025 PWY-6482 diphthamide biosynthesis (archaea) Msed_2025 PWY-7546 diphthamide biosynthesis (eukaryotes) Msed_2032 PWY-3781 aerobic respiration I (cytochrome c) Msed_2032 PWY-4521 arsenite oxidation I (respiratory) Msed_2032 PWY-6692 Fe(II) oxidation Msed_2032 PWY-7279 aerobic respiration II (cytochrome c) (yeast) Msed_2036 PWY-6545 pyrimidine deoxyribonucleotides de novo biosynthesis III Msed_2036 PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I Msed_2036 PWY-7187 pyrimidine deoxyribonucleotides de novo biosynthesis II Msed_2036 PWY-7197 pyrimidine deoxyribonucleotide phosphorylation Msed_2036 PWY-7198 pyrimidine deoxyribonucleotides de novo biosynthesis IV Msed_2036 PWY-7210 pyrimidine deoxyribonucleotides biosynthesis from CTP Msed_2063 PWY-2941 L-lysine biosynthesis II Msed_2063 PWY-2942 L-lysine biosynthesis III Msed_2063 PWY-5097 L-lysine biosynthesis VI Msed_2078 PWY-3801 sucrose degradation II (sucrose synthase) Msed_2078 PWY-3861 mannitol degradation II Msed_2078 PWY-3881 mannitol biosynthesis Msed_2078 PWY-5054 sorbitol biosynthesis I Msed_2078 PWY-5384 sucrose degradation IV (sucrose phosphorylase) Msed_2078 PWY-5514 UDP-N-acetyl-D-galactosamine biosynthesis II Msed_2078 PWY-5659 GDP-mannose biosynthesis Msed_2078 PWY-6142 gluconeogenesis II (Methanobacterium thermoautotrophicum) Msed_2078 PWY-621 sucrose degradation III (sucrose invertase) Msed_2078 PWY-622 starch biosynthesis Msed_2078 PWY-6531 mannitol cycle Msed_2078 PWY-6981 chitin biosynthesis Msed_2078 PWY-7238 sucrose biosynthesis II Msed_2078 PWY-7347 sucrose biosynthesis III Msed_2078 PWY-7385 1,3-propanediol biosynthesis (engineered) Msed_2078 PWY-7456 mannan degradation Msed_2078 PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) Msed_2091 PWY-7377 cob(II)yrinate a,c-diamide biosynthesis I (early cobalt insertion) Msed_2095 PWY-5101 L-isoleucine biosynthesis II Msed_2095 PWY-6871 3-methylbutanol biosynthesis Msed_2101 PWY-7377 cob(II)yrinate a,c-diamide biosynthesis I (early cobalt insertion) Msed_2130 PWY-181 photorespiration Msed_2131 PWY-5188 tetrapyrrole biosynthesis I (from glutamate) Msed_2134 PWY-5265 peptidoglycan biosynthesis II (staphylococci) Msed_2134 PWY-6470 peptidoglycan biosynthesis V (β-lactam resistance) Msed_2134 PWY-6471 peptidoglycan biosynthesis IV (Enterococcus faecium) Msed_2136 PWY-5123 trans, trans-farnesyl diphosphate biosynthesis Msed_2136 PWY-6174 mevalonate pathway II (archaea) Msed_2136 PWY-6383 mono-trans, poly-cis decaprenyl phosphate biosynthesis Msed_2136 PWY-6859 all-trans-farnesol biosynthesis Msed_2136 PWY-7102 bisabolene biosynthesis Msed_2136 PWY-7391 isoprene biosynthesis II (engineered) Msed_2136 PWY-7524 mevalonate pathway III (archaea) Msed_2136 PWY-7560 methylerythritol phosphate pathway II Msed_2136 PWY-922 mevalonate pathway I Msed_2137 PWY-6174 mevalonate pathway II (archaea) Msed_2137 PWY-7524 mevalonate pathway III (archaea) Msed_2149 PWY-6893 thiamin diphosphate biosynthesis II (Bacillus) Msed_2149 PWY-6894 thiamin diphosphate biosynthesis I (E. coli) Msed_2149 PWY-6896 thiamin salvage I Msed_2149 PWY-6897 thiamin salvage II Msed_2166 PWY-6893 thiamin diphosphate biosynthesis II (Bacillus) Msed_2166 PWY-6894 thiamin diphosphate biosynthesis I (E. coli) Msed_2166 PWY-6897 thiamin salvage II Msed_2166 PWY-6907 thiamin diphosphate biosynthesis III (Staphylococcus) Msed_2166 PWY-6908 thiamin diphosphate biosynthesis IV (eukaryotes) Msed_2166 PWY-7353 4-methyl-5(β-hydroxyethyl)thiazole salvage (yeast) Msed_2166 PWY-7357 thiamin formation from pyrithiamine and oxythiamine (yeast) Msed_2172 PWY-7219 adenosine ribonucleotides de novo biosynthesis Msed_2212 PWY-40 putrescine biosynthesis I Msed_2212 PWY-6305 putrescine biosynthesis IV Msed_2217 PWY-6689 tRNA splicing Msed_2221 PWY-5532 adenosine nucleotides degradation IV Msed_2226 PWY-7206 pyrimidine deoxyribonucleotides dephosphorylation Msed_2231 PWY-6829 tRNA methylation (yeast) Msed_2238 PWY-1042 glycolysis IV (plant cytosol) Msed_2238 PWY-2221 Entner-Doudoroff pathway III (semi-phosphorylative) Msed_2238 PWY-5484 glycolysis II (from fructose 6-phosphate) Msed_2238 PWY-5723 Rubisco shunt Msed_2238 PWY-6142 gluconeogenesis II (Methanobacterium thermoautotrophicum) Msed_2238 PWY-6886 1-butanol autotrophic biosynthesis Msed_2238 PWY-6901 superpathway of glucose and xylose degradation Msed_2238 PWY-7003 glycerol degradation to butanol Msed_2238 PWY-7124 ethylene biosynthesis V (engineered) Msed_2238 PWY-7218 photosynthetic 3-hydroxybutanoate biosynthesis (engineered) Msed_2245 PWY-7377 cob(II)yrinate a,c-diamide biosynthesis I (early cobalt insertion) Msed_2248 PWY-5041 S-adenosyl-L-methionine cycle II Msed_2248 PWY-6151 S-adenosyl-L-methionine cycle I Msed_2248 PWY-6936 seleno-amino acid biosynthesis Msed_2248 PWY-702 L-methionine biosynthesis II Msed_2249 PWY-5041 S-adenosyl-L-methionine cycle II Msed_2249 PWY-6151 S-adenosyl-L-methionine cycle I Msed_2249 PWY-6936 seleno-amino acid biosynthesis Msed_2249 PWY-702 L-methionine biosynthesis II Msed_2255 PWY-6349 CDP-archaeol biosynthesis Msed_2257 PWY-5041 S-adenosyl-L-methionine cycle II Msed_2266 PWY-6689 tRNA splicing Msed_2269 PWY-4361 S-methyl-5-thio-α-D-ribose 1-phosphate degradation Msed_2269 PWY-7174 S-methyl-5-thio-α-D-ribose 1-phosphate degradation II Msed_2272 PWY-6700 queuosine biosynthesis Msed_2272 PWY-6711 archaeosine biosynthesis Msed_2274 PWY-6711 archaeosine biosynthesis Msed_2287 PWY-1861 formaldehyde assimilation II (RuMP Cycle) Msed_2287 PWY-5723 Rubisco shunt Msed_2291 PWY-6349 CDP-archaeol biosynthesis