Msm_0007 PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis Msm_0007 PWY-5957 L-nicotianamine biosynthesis Msm_0033 PWY-6654 phosphopantothenate biosynthesis III Msm_0044 PWY-6936 seleno-amino acid biosynthesis Msm_0055 PWY-6160 3-dehydroquinate biosynthesis II (archaea) Msm_0056 PWY-6160 3-dehydroquinate biosynthesis II (archaea) Msm_0060 PWY-6654 phosphopantothenate biosynthesis III Msm_0065 PWY-6167 flavin biosynthesis II (archaea) Msm_0065 PWY-6168 flavin biosynthesis III (fungi) Msm_0066 PWY-5265 peptidoglycan biosynthesis II (staphylococci) Msm_0066 PWY-6470 peptidoglycan biosynthesis V (β-lactam resistance) Msm_0066 PWY-6471 peptidoglycan biosynthesis IV (Enterococcus faecium) Msm_0079 PWY-5198 factor 420 biosynthesis Msm_0080 PWY-6637 sulfolactate degradation II Msm_0080 PWY-6643 coenzyme M biosynthesis II Msm_0089 PWY-3341 L-proline biosynthesis III Msm_0089 PWY-4981 L-proline biosynthesis II (from arginine) Msm_0089 PWY-6344 L-ornithine degradation II (Stickland reaction) Msm_0101 PWY-5194 siroheme biosynthesis Msm_0101 PWY-7377 cob(II)yrinate a,c-diamide biosynthesis I (early cobalt insertion) Msm_0102 PWY-5041 S-adenosyl-L-methionine cycle II Msm_0102 PWY-6151 S-adenosyl-L-methionine cycle I Msm_0102 PWY-6936 seleno-amino acid biosynthesis Msm_0102 PWY-702 L-methionine biosynthesis II Msm_0124 PWY-6349 CDP-archaeol biosynthesis Msm_0130 PWY-6823 molybdenum cofactor biosynthesis Msm_0142 PWY-6482 diphthamide biosynthesis (archaea) Msm_0142 PWY-7546 diphthamide biosynthesis (eukaryotes) Msm_0147 PWY-7176 UTP and CTP de novo biosynthesis Msm_0147 PWY-7177 UTP and CTP dephosphorylation II Msm_0147 PWY-7185 UTP and CTP dephosphorylation I Msm_0153 PWY-1042 glycolysis IV (plant cytosol) Msm_0153 PWY-2221 Entner-Doudoroff pathway III (semi-phosphorylative) Msm_0153 PWY-5484 glycolysis II (from fructose 6-phosphate) Msm_0153 PWY-5723 Rubisco shunt Msm_0153 PWY-6142 gluconeogenesis II (Methanobacterium thermoautotrophicum) Msm_0153 PWY-6886 1-butanol autotrophic biosynthesis Msm_0153 PWY-6901 superpathway of glucose and xylose degradation Msm_0153 PWY-7003 glycerol degradation to butanol Msm_0153 PWY-7124 ethylene biosynthesis V (engineered) Msm_0153 PWY-7218 photosynthetic 3-hydroxybutanoate biosynthesis (engineered) Msm_0174 PWY-5344 L-homocysteine biosynthesis Msm_0174 PWY-7174 S-methyl-5-thio-α-D-ribose 1-phosphate degradation II Msm_0175 PWY-5344 L-homocysteine biosynthesis Msm_0184 PWY-6167 flavin biosynthesis II (archaea) Msm_0192 PWY-4983 L-citrulline-nitric oxide cycle Msm_0192 PWY-4984 urea cycle Msm_0192 PWY-5 canavanine biosynthesis Msm_0192 PWY-5154 L-arginine biosynthesis III (via N-acetyl-L-citrulline) Msm_0192 PWY-7400 L-arginine biosynthesis IV (archaebacteria) Msm_0203 PWY-6545 pyrimidine deoxyribonucleotides de novo biosynthesis III Msm_0203 PWY-7176 UTP and CTP de novo biosynthesis Msm_0203 PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I Msm_0203 PWY-7187 pyrimidine deoxyribonucleotides de novo biosynthesis II Msm_0203 PWY-7197 pyrimidine deoxyribonucleotide phosphorylation Msm_0203 PWY-7198 pyrimidine deoxyribonucleotides de novo biosynthesis IV Msm_0203 PWY-7205 CMP phosphorylation Msm_0203 PWY-7210 pyrimidine deoxyribonucleotides biosynthesis from CTP Msm_0203 PWY-7220 adenosine deoxyribonucleotides de novo biosynthesis II Msm_0203 PWY-7221 guanosine ribonucleotides de novo biosynthesis Msm_0203 PWY-7222 guanosine deoxyribonucleotides de novo biosynthesis II Msm_0203 PWY-7224 purine deoxyribonucleosides salvage Msm_0203 PWY-7226 guanosine deoxyribonucleotides de novo biosynthesis I Msm_0203 PWY-7227 adenosine deoxyribonucleotides de novo biosynthesis Msm_0217 PWY-6689 tRNA splicing Msm_0227 PWY-6174 mevalonate pathway II (archaea) Msm_0227 PWY-7391 isoprene biosynthesis II (engineered) Msm_0227 PWY-7524 mevalonate pathway III (archaea) Msm_0227 PWY-922 mevalonate pathway I Msm_0228 PWY-5392 reductive TCA cycle II Msm_0228 PWY-5537 pyruvate fermentation to acetate V Msm_0228 PWY-5538 pyruvate fermentation to acetate VI Msm_0228 PWY-5690 TCA cycle II (plants and fungi) Msm_0228 PWY-5913 TCA cycle VI (obligate autotrophs) Msm_0228 PWY-6728 methylaspartate cycle Msm_0228 PWY-6969 TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase) Msm_0228 PWY-7384 anaerobic energy metabolism (invertebrates, mitochondrial) Msm_0231 PWY-6163 chorismate biosynthesis from 3-dehydroquinate Msm_0231 PWY-6416 quinate degradation II Msm_0231 PWY-6707 gallate biosynthesis Msm_0238 PWY-7377 cob(II)yrinate a,c-diamide biosynthesis I (early cobalt insertion) Msm_0240 PWY-5964 guanylyl molybdenum cofactor biosynthesis Msm_0264 PWY-6823 molybdenum cofactor biosynthesis Msm_0264 PWY-6891 thiazole biosynthesis II (Bacillus) Msm_0264 PWY-6892 thiazole biosynthesis I (E. coli) Msm_0264 PWY-7250 [2Fe-2S] iron-sulfur cluster biosynthesis Msm_0265 PWY-5344 L-homocysteine biosynthesis Msm_0265 PWY-7174 S-methyl-5-thio-α-D-ribose 1-phosphate degradation II Msm_0270 PWY-6936 seleno-amino acid biosynthesis Msm_0270 PWY-7274 D-cycloserine biosynthesis Msm_0271 PWY-6936 seleno-amino acid biosynthesis Msm_0273 PWY-6163 chorismate biosynthesis from 3-dehydroquinate Msm_0284 PWY-1861 formaldehyde assimilation II (RuMP Cycle) Msm_0284 PWY-5723 Rubisco shunt Msm_0286 PWY-6349 CDP-archaeol biosynthesis Msm_0288 PWY-5198 factor 420 biosynthesis Msm_0289 PWY-6910 hydroxymethylpyrimidine salvage Msm_0289 PWY-7356 thiamin salvage IV (yeast) Msm_0289 PWY-7357 thiamin formation from pyrithiamine and oxythiamine (yeast) Msm_0343 PWY-7221 guanosine ribonucleotides de novo biosynthesis Msm_0345 PWY-7221 guanosine ribonucleotides de novo biosynthesis Msm_0350 PWY-5101 L-isoleucine biosynthesis II Msm_0350 PWY-6871 3-methylbutanol biosynthesis Msm_0360 PWY-5265 peptidoglycan biosynthesis II (staphylococci) Msm_0360 PWY-6470 peptidoglycan biosynthesis V (β-lactam resistance) Msm_0360 PWY-6471 peptidoglycan biosynthesis IV (Enterococcus faecium) Msm_0375 PWY-5154 L-arginine biosynthesis III (via N-acetyl-L-citrulline) Msm_0375 PWY-7400 L-arginine biosynthesis IV (archaebacteria) Msm_0377 PWY-7560 methylerythritol phosphate pathway II Msm_0379 PWY-5154 L-arginine biosynthesis III (via N-acetyl-L-citrulline) Msm_0387 PWY-1341 phenylacetate degradation II (anaerobic) Msm_0387 PWY-6318 L-phenylalanine degradation IV (mammalian, via side chain) Msm_0393 PWY-3781 aerobic respiration I (cytochrome c) Msm_0393 PWY-4302 aerobic respiration III (alternative oxidase pathway) Msm_0393 PWY-561 superpathway of glyoxylate cycle and fatty acid degradation Msm_0393 PWY-5690 TCA cycle II (plants and fungi) Msm_0393 PWY-6728 methylaspartate cycle Msm_0393 PWY-6969 TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase) Msm_0393 PWY-7254 TCA cycle VII (acetate-producers) Msm_0393 PWY-7279 aerobic respiration II (cytochrome c) (yeast) Msm_0398 PWY-7183 pyrimidine nucleobases salvage I Msm_0402 PWY-7187 pyrimidine deoxyribonucleotides de novo biosynthesis II Msm_0434 PWY-7219 adenosine ribonucleotides de novo biosynthesis Msm_0435 PWY-7219 adenosine ribonucleotides de novo biosynthesis Msm_0488 PWY-5154 L-arginine biosynthesis III (via N-acetyl-L-citrulline) Msm_0488 PWY-5686 UMP biosynthesis Msm_0488 PWY-7400 L-arginine biosynthesis IV (archaebacteria) Msm_0489 PWY-5154 L-arginine biosynthesis III (via N-acetyl-L-citrulline) Msm_0489 PWY-5686 UMP biosynthesis Msm_0489 PWY-7400 L-arginine biosynthesis IV (archaebacteria) Msm_0491 PWY-5316 nicotine biosynthesis Msm_0491 PWY-5381 pyridine nucleotide cycling (plants) Msm_0491 PWY-5653 NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde Msm_0491 PWY-7342 superpathway of nicotine biosynthesis Msm_0494 PWY-5316 nicotine biosynthesis Msm_0494 PWY-7342 superpathway of nicotine biosynthesis Msm_0506 PWY-7234 inosine-5'-phosphate biosynthesis III Msm_0518 PWY-5531 chlorophyllide a biosynthesis II (anaerobic) Msm_0518 PWY-7159 chlorophyllide a biosynthesis III (aerobic, light independent) Msm_0520 PWY-6545 pyrimidine deoxyribonucleotides de novo biosynthesis III Msm_0520 PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I Msm_0520 PWY-7187 pyrimidine deoxyribonucleotides de novo biosynthesis II Msm_0520 PWY-7197 pyrimidine deoxyribonucleotide phosphorylation Msm_0520 PWY-7198 pyrimidine deoxyribonucleotides de novo biosynthesis IV Msm_0520 PWY-7210 pyrimidine deoxyribonucleotides biosynthesis from CTP Msm_0573 PWY-7380 biotin biosynthesis from 8-amino-7-oxononanoate II Msm_0576 PWY-5663 tetrahydrobiopterin biosynthesis I Msm_0576 PWY-5664 tetrahydrobiopterin biosynthesis II Msm_0576 PWY-6147 6-hydroxymethyl-dihydropterin diphosphate biosynthesis I Msm_0576 PWY-6703 preQ0 biosynthesis Msm_0576 PWY-6983 tetrahydrobiopterin biosynthesis III Msm_0576 PWY-7442 drosopterin and aurodrosopterin biosynthesis Msm_0628 PWY-1042 glycolysis IV (plant cytosol) Msm_0628 PWY-2221 Entner-Doudoroff pathway III (semi-phosphorylative) Msm_0628 PWY-5484 glycolysis II (from fructose 6-phosphate) Msm_0628 PWY-5723 Rubisco shunt Msm_0628 PWY-6142 gluconeogenesis II (Methanobacterium thermoautotrophicum) Msm_0628 PWY-6886 1-butanol autotrophic biosynthesis Msm_0628 PWY-6901 superpathway of glucose and xylose degradation Msm_0628 PWY-7003 glycerol degradation to butanol Msm_0628 PWY-7218 photosynthetic 3-hydroxybutanoate biosynthesis (engineered) Msm_0628 PWY-7383 anaerobic energy metabolism (invertebrates, cytosol) Msm_0630 PWY-5199 factor 420 polyglutamylation Msm_0633 PWY-6711 archaeosine biosynthesis Msm_0641 PWY-7303 3-dimethylallyl-4-hydroxybenzoate biosynthesis Msm_0644 PWY-6890 4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis Msm_0648 PWY-6749 CMP-legionaminate biosynthesis I Msm_0655 PWY-5514 UDP-N-acetyl-D-galactosamine biosynthesis II Msm_0656 PWY-6749 CMP-legionaminate biosynthesis I Msm_0657 PWY-1042 glycolysis IV (plant cytosol) Msm_0657 PWY-2221 Entner-Doudoroff pathway III (semi-phosphorylative) Msm_0657 PWY-5484 glycolysis II (from fructose 6-phosphate) Msm_0657 PWY-5723 Rubisco shunt Msm_0657 PWY-6142 gluconeogenesis II (Methanobacterium thermoautotrophicum) Msm_0657 PWY-6886 1-butanol autotrophic biosynthesis Msm_0657 PWY-6901 superpathway of glucose and xylose degradation Msm_0657 PWY-7003 glycerol degradation to butanol Msm_0657 PWY-7124 ethylene biosynthesis V (engineered) Msm_0657 PWY-7218 photosynthetic 3-hydroxybutanoate biosynthesis (engineered) Msm_0672 PWY-6147 6-hydroxymethyl-dihydropterin diphosphate biosynthesis I Msm_0672 PWY-6148 tetrahydromethanopterin biosynthesis Msm_0672 PWY-6797 6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea) Msm_0672 PWY-6898 thiamin salvage III Msm_0672 PWY-6907 thiamin diphosphate biosynthesis III (Staphylococcus) Msm_0672 PWY-6908 thiamin diphosphate biosynthesis IV (eukaryotes) Msm_0672 PWY-7539 6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia) Msm_0677 PWY-6832 2-aminoethylphosphonate degradation II Msm_0713 PWY-7219 adenosine ribonucleotides de novo biosynthesis Msm_0722 PWY-6871 3-methylbutanol biosynthesis Msm_0727 PWY-5041 S-adenosyl-L-methionine cycle II Msm_0734 PWY-7205 CMP phosphorylation Msm_0737 PWY-7219 adenosine ribonucleotides de novo biosynthesis Msm_0766 PWY-6987 lipoate biosynthesis and incorporation III (Bacillus) Msm_0766 PWY-7381 lipoate biosynthesis and incorporation (glycine cleavage system, yeast) Msm_0795 PWY-5207 coenzyme B/coenzyme M regeneration Msm_0796 PWY-5207 coenzyme B/coenzyme M regeneration Msm_0797 PWY-6700 queuosine biosynthesis Msm_0801 PWY-6482 diphthamide biosynthesis (archaea) Msm_0802 PWY-6829 tRNA methylation (yeast) Msm_0802 PWY-7285 methylwyosine biosynthesis Msm_0802 PWY-7286 7-(3-amino-3-carboxypropyl)-wyosine biosynthesis Msm_0804 PWY-4361 S-methyl-5-thio-α-D-ribose 1-phosphate degradation Msm_0804 PWY-7174 S-methyl-5-thio-α-D-ribose 1-phosphate degradation II Msm_0821 PWY-5686 UMP biosynthesis Msm_0827 PWY-5651 L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde Msm_0827 PWY-6309 L-tryptophan degradation XI (mammalian, via kynurenine) Msm_0829 PWY-2941 L-lysine biosynthesis II Msm_0829 PWY-2942 L-lysine biosynthesis III Msm_0829 PWY-5097 L-lysine biosynthesis VI Msm_0829 PWY-5154 L-arginine biosynthesis III (via N-acetyl-L-citrulline) Msm_0829 PWY-6559 spermidine biosynthesis II Msm_0829 PWY-6562 norspermidine biosynthesis Msm_0829 PWY-7153 grixazone biosynthesis Msm_0829 PWY-7400 L-arginine biosynthesis IV (archaebacteria) Msm_0830 PWY-2941 L-lysine biosynthesis II Msm_0830 PWY-2942 L-lysine biosynthesis III Msm_0830 PWY-5097 L-lysine biosynthesis VI Msm_0831 PWY-2941 L-lysine biosynthesis II Msm_0831 PWY-2942 L-lysine biosynthesis III Msm_0831 PWY-5097 L-lysine biosynthesis VI Msm_0832 PWY-2941 L-lysine biosynthesis II Msm_0832 PWY-2942 L-lysine biosynthesis III Msm_0832 PWY-5097 L-lysine biosynthesis VI Msm_0832 PWY-6559 spermidine biosynthesis II Msm_0832 PWY-6562 norspermidine biosynthesis Msm_0832 PWY-7153 grixazone biosynthesis Msm_0834 PWY-3461 L-tyrosine biosynthesis II Msm_0834 PWY-3462 L-phenylalanine biosynthesis II Msm_0834 PWY-6120 L-tyrosine biosynthesis III Msm_0834 PWY-6627 salinosporamide A biosynthesis Msm_0835 PWY-6163 chorismate biosynthesis from 3-dehydroquinate Msm_0837 PWY-7377 cob(II)yrinate a,c-diamide biosynthesis I (early cobalt insertion) Msm_0843 PWY-7180 2'-deoxy-α-D-ribose 1-phosphate degradation Msm_0848 PWY-6148 tetrahydromethanopterin biosynthesis Msm_0853 PWY-7335 UDP-N-acetyl-α-D-mannosaminouronate biosynthesis Msm_0859 PWY-6167 flavin biosynthesis II (archaea) Msm_0859 PWY-6168 flavin biosynthesis III (fungi) Msm_0860 PWY-5154 L-arginine biosynthesis III (via N-acetyl-L-citrulline) Msm_0860 PWY-7400 L-arginine biosynthesis IV (archaebacteria) Msm_0863 PWY-7204 pyridoxal 5'-phosphate salvage II (plants) Msm_0863 PWY-7282 4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast) Msm_0874 PWY-6610 adenine and adenosine salvage IV Msm_0876 PWY-40 putrescine biosynthesis I Msm_0876 PWY-6305 putrescine biosynthesis IV Msm_0878 PWY-40 putrescine biosynthesis I Msm_0878 PWY-43 putrescine biosynthesis II Msm_0878 PWY-6305 putrescine biosynthesis IV Msm_0878 PWY-6834 spermidine biosynthesis III Msm_0879 PWY-5083 NAD/NADH phosphorylation and dephosphorylation Msm_0879 PWY-7268 NAD/NADP-NADH/NADPH cytosolic interconversion (yeast) Msm_0879 PWY-7269 NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast) Msm_0881 PWY-5188 tetrapyrrole biosynthesis I (from glutamate) Msm_0881 PWY-5189 tetrapyrrole biosynthesis II (from glycine) Msm_0916 PWY-6897 thiamin salvage II Msm_0916 PWY-7353 4-methyl-5(β-hydroxyethyl)thiazole salvage (yeast) Msm_0916 PWY-7357 thiamin formation from pyrithiamine and oxythiamine (yeast) Msm_0917 PWY-6893 thiamin diphosphate biosynthesis II (Bacillus) Msm_0917 PWY-6894 thiamin diphosphate biosynthesis I (E. coli) Msm_0917 PWY-6897 thiamin salvage II Msm_0917 PWY-6907 thiamin diphosphate biosynthesis III (Staphylococcus) Msm_0917 PWY-6908 thiamin diphosphate biosynthesis IV (eukaryotes) Msm_0917 PWY-7353 4-methyl-5(β-hydroxyethyl)thiazole salvage (yeast) Msm_0917 PWY-7357 thiamin formation from pyrithiamine and oxythiamine (yeast) Msm_0918 PWY-1042 glycolysis IV (plant cytosol) Msm_0918 PWY-5484 glycolysis II (from fructose 6-phosphate) Msm_0918 PWY-6886 1-butanol autotrophic biosynthesis Msm_0918 PWY-6901 superpathway of glucose and xylose degradation Msm_0918 PWY-7003 glycerol degradation to butanol Msm_0919 PWY-1042 glycolysis IV (plant cytosol) Msm_0919 PWY-5484 glycolysis II (from fructose 6-phosphate) Msm_0919 PWY-6142 gluconeogenesis II (Methanobacterium thermoautotrophicum) Msm_0919 PWY-7003 glycerol degradation to butanol Msm_0922 PWY-7285 methylwyosine biosynthesis Msm_0922 PWY-7286 7-(3-amino-3-carboxypropyl)-wyosine biosynthesis Msm_0924 PWY-5392 reductive TCA cycle II Msm_0924 PWY-5537 pyruvate fermentation to acetate V Msm_0924 PWY-5538 pyruvate fermentation to acetate VI Msm_0924 PWY-5690 TCA cycle II (plants and fungi) Msm_0924 PWY-5913 TCA cycle VI (obligate autotrophs) Msm_0924 PWY-6728 methylaspartate cycle Msm_0924 PWY-6969 TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase) Msm_0924 PWY-7384 anaerobic energy metabolism (invertebrates, mitochondrial) Msm_0933 PWY-5508 adenosylcobalamin biosynthesis from cobyrinate a,c-diamide II Msm_0933 PWY-5509 adenosylcobalamin biosynthesis from cobyrinate a,c-diamide I Msm_0933 PWY-6269 adenosylcobalamin salvage from cobinamide II Msm_0936 PWY-6703 preQ0 biosynthesis Msm_0940 PWY-2301 myo-inositol biosynthesis Msm_0940 PWY-4661 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) Msm_0940 PWY-6372 1D-myo-inositol hexakisphosphate biosynthesis IV (Dictyostelium) Msm_0940 PWY-6580 phosphatidylinositol biosynthesis I (bacteria) Msm_0940 PWY-6664 di-myo-inositol phosphate biosynthesis Msm_0941 PWY-6349 CDP-archaeol biosynthesis Msm_0944 PWY-1269 CMP-3-deoxy-D-manno-octulosonate biosynthesis I Msm_0944 PWY-5111 CMP-3-deoxy-D-manno-octulosonate biosynthesis II (from D-arabinose 5-phosphate) Msm_0946 PWY-181 photorespiration Msm_0950 PWY-6823 molybdenum cofactor biosynthesis Msm_0965 PWY-1361 benzoyl-CoA degradation I (aerobic) Msm_0965 PWY-5109 2-methylbutanoate biosynthesis Msm_0965 PWY-5136 fatty acid β-oxidation II (peroxisome) Msm_0965 PWY-5138 unsaturated, even numbered fatty acid β-oxidation Msm_0965 PWY-5177 glutaryl-CoA degradation Msm_0965 PWY-5789 3-hydroxypropanoate/4-hydroxybutanate cycle Msm_0965 PWY-6435 4-hydroxybenzoate biosynthesis V Msm_0965 PWY-6583 pyruvate fermentation to butanol I Msm_0965 PWY-6863 pyruvate fermentation to hexanol Msm_0965 PWY-6883 pyruvate fermentation to butanol II Msm_0965 PWY-6944 androstenedione degradation Msm_0965 PWY-6945 cholesterol degradation to androstenedione I (cholesterol oxidase) Msm_0965 PWY-6946 cholesterol degradation to androstenedione II (cholesterol dehydrogenase) Msm_0965 PWY-7007 methyl ketone biosynthesis Msm_0965 PWY-7046 4-coumarate degradation (anaerobic) Msm_0965 PWY-7094 fatty acid salvage Msm_0965 PWY-7216 (R)- and (S)-3-hydroxybutanoate biosynthesis Msm_0965 PWY-735 jasmonic acid biosynthesis Msm_0965 PWY-7401 crotonate fermentation (to acetate and cyclohexane carboxylate) Msm_0967 PWY-5188 tetrapyrrole biosynthesis I (from glutamate) Msm_0968 PWY-5194 siroheme biosynthesis Msm_0968 PWY-7377 cob(II)yrinate a,c-diamide biosynthesis I (early cobalt insertion) Msm_0973 PWY-6167 flavin biosynthesis II (archaea) Msm_0974 PWY-5198 factor 420 biosynthesis Msm_0975 PWY-5199 factor 420 polyglutamylation Msm_0976 PWY-6123 inosine-5'-phosphate biosynthesis I Msm_0976 PWY-6124 inosine-5'-phosphate biosynthesis II Msm_0976 PWY-7234 inosine-5'-phosphate biosynthesis III Msm_0982 PWY-5669 phosphatidylethanolamine biosynthesis I Msm_0985 PWY-6147 6-hydroxymethyl-dihydropterin diphosphate biosynthesis I Msm_0985 PWY-6148 tetrahydromethanopterin biosynthesis Msm_0985 PWY-6797 6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea) Msm_0985 PWY-7539 6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia) Msm_0987 PWY-3581 (S)-reticuline biosynthesis I Msm_0987 PWY-5254 methanofuran biosynthesis Msm_0987 PWY-5474 hydroxycinnamic acid tyramine amides biosynthesis Msm_0987 PWY-6133 (S)-reticuline biosynthesis II Msm_0987 PWY-6802 salidroside biosynthesis Msm_0987 PWY-7297 octopamine biosynthesis Msm_0988 PWY-5484 glycolysis II (from fructose 6-phosphate) Msm_0997 PWY-5686 UMP biosynthesis Msm_1031 PWY-6829 tRNA methylation (yeast) Msm_1033 PWY-5663 tetrahydrobiopterin biosynthesis I Msm_1033 PWY-5664 tetrahydrobiopterin biosynthesis II Msm_1033 PWY-6147 6-hydroxymethyl-dihydropterin diphosphate biosynthesis I Msm_1033 PWY-6703 preQ0 biosynthesis Msm_1033 PWY-6797 6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea) Msm_1033 PWY-6983 tetrahydrobiopterin biosynthesis III Msm_1033 PWY-7442 drosopterin and aurodrosopterin biosynthesis Msm_1035 PWY-5198 factor 420 biosynthesis Msm_1036 PWY-6829 tRNA methylation (yeast) Msm_1036 PWY-7285 methylwyosine biosynthesis Msm_1036 PWY-7286 7-(3-amino-3-carboxypropyl)-wyosine biosynthesis Msm_1039 PWY-6121 5-aminoimidazole ribonucleotide biosynthesis I Msm_1039 PWY-6122 5-aminoimidazole ribonucleotide biosynthesis II Msm_1039 PWY-6277 superpathway of 5-aminoimidazole ribonucleotide biosynthesis Msm_1052 PWY-7432 L-phenylalanine biosynthesis III (cytosolic, plants) Msm_1055 PWY-6703 preQ0 biosynthesis Msm_1084 PWY-4983 L-citrulline-nitric oxide cycle Msm_1084 PWY-4984 urea cycle Msm_1084 PWY-5 canavanine biosynthesis Msm_1084 PWY-5154 L-arginine biosynthesis III (via N-acetyl-L-citrulline) Msm_1084 PWY-7400 L-arginine biosynthesis IV (archaebacteria) Msm_1091 PWY-6938 NADH repair Msm_1145 PWY-5958 acridone alkaloid biosynthesis Msm_1145 PWY-6660 2-heptyl-3-hydroxy-4(1H)-quinolone biosynthesis Msm_1145 PWY-6661 4-hydroxy-2(1H)-quinolone biosynthesis Msm_1146 PWY-5958 acridone alkaloid biosynthesis Msm_1146 PWY-6660 2-heptyl-3-hydroxy-4(1H)-quinolone biosynthesis Msm_1146 PWY-6661 4-hydroxy-2(1H)-quinolone biosynthesis Msm_1151 PWY-6123 inosine-5'-phosphate biosynthesis I Msm_1151 PWY-6124 inosine-5'-phosphate biosynthesis II Msm_1151 PWY-7219 adenosine ribonucleotides de novo biosynthesis Msm_1151 PWY-7234 inosine-5'-phosphate biosynthesis III Msm_1158 PWY-6893 thiamin diphosphate biosynthesis II (Bacillus) Msm_1158 PWY-6894 thiamin diphosphate biosynthesis I (E. coli) Msm_1158 PWY-6896 thiamin salvage I Msm_1158 PWY-6897 thiamin salvage II Msm_1173 PWY-6829 tRNA methylation (yeast) Msm_1179 PWY-6163 chorismate biosynthesis from 3-dehydroquinate Msm_1195 PWY-7206 pyrimidine deoxyribonucleotides dephosphorylation Msm_1200 PWY-5508 adenosylcobalamin biosynthesis from cobyrinate a,c-diamide II Msm_1200 PWY-5509 adenosylcobalamin biosynthesis from cobyrinate a,c-diamide I Msm_1200 PWY-6269 adenosylcobalamin salvage from cobinamide II Msm_1202 PWY-5057 L-valine degradation II Msm_1202 PWY-5076 L-leucine degradation III Msm_1202 PWY-5078 L-isoleucine degradation II Msm_1202 PWY-5101 L-isoleucine biosynthesis II Msm_1202 PWY-5103 L-isoleucine biosynthesis III Msm_1202 PWY-5104 L-isoleucine biosynthesis IV Msm_1202 PWY-5108 L-isoleucine biosynthesis V Msm_1204 PWY-5198 factor 420 biosynthesis Msm_1213 PWY-1723 formaldehyde oxidation V (H4MPT pathway) Msm_1213 PWY-1861 formaldehyde assimilation II (RuMP Cycle) Msm_1213 PWY-5686 UMP biosynthesis Msm_1218 PWY-5381 pyridine nucleotide cycling (plants) Msm_1218 PWY-5695 urate biosynthesis/inosine 5'-phosphate degradation Msm_1218 PWY-6596 adenosine nucleotides degradation I Msm_1218 PWY-6606 guanosine nucleotides degradation II Msm_1218 PWY-6607 guanosine nucleotides degradation I Msm_1218 PWY-6608 guanosine nucleotides degradation III Msm_1218 PWY-7185 UTP and CTP dephosphorylation I Msm_1222 PWY-5101 L-isoleucine biosynthesis II Msm_1222 PWY-5103 L-isoleucine biosynthesis III Msm_1222 PWY-5104 L-isoleucine biosynthesis IV Msm_1222 PWY-7111 pyruvate fermentation to isobutanol (engineered) Msm_1223 PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type Msm_1223 PWY-6142 gluconeogenesis II (Methanobacterium thermoautotrophicum) Msm_1223 PWY-7115 C4 photosynthetic carbon assimilation cycle, NAD-ME type Msm_1223 PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type Msm_1224 PWY-5101 L-isoleucine biosynthesis II Msm_1224 PWY-5103 L-isoleucine biosynthesis III Msm_1224 PWY-5104 L-isoleucine biosynthesis IV Msm_1224 PWY-5938 (R)-acetoin biosynthesis I Msm_1224 PWY-5939 (R)-acetoin biosynthesis II Msm_1224 PWY-6389 (S)-acetoin biosynthesis Msm_1224 PWY-7111 pyruvate fermentation to isobutanol (engineered) Msm_1225 PWY-5101 L-isoleucine biosynthesis II Msm_1225 PWY-5103 L-isoleucine biosynthesis III Msm_1225 PWY-5104 L-isoleucine biosynthesis IV Msm_1225 PWY-5938 (R)-acetoin biosynthesis I Msm_1225 PWY-5939 (R)-acetoin biosynthesis II Msm_1225 PWY-6389 (S)-acetoin biosynthesis Msm_1225 PWY-7111 pyruvate fermentation to isobutanol (engineered) Msm_1226 PWY-4981 L-proline biosynthesis II (from arginine) Msm_1226 PWY-4984 urea cycle Msm_1226 PWY-7400 L-arginine biosynthesis IV (archaebacteria) Msm_1227 PWY-6121 5-aminoimidazole ribonucleotide biosynthesis I Msm_1227 PWY-6122 5-aminoimidazole ribonucleotide biosynthesis II Msm_1227 PWY-6277 superpathway of 5-aminoimidazole ribonucleotide biosynthesis Msm_1233 PWY-5188 tetrapyrrole biosynthesis I (from glutamate) Msm_1237 PWY-5101 L-isoleucine biosynthesis II Msm_1237 PWY-5103 L-isoleucine biosynthesis III Msm_1237 PWY-5104 L-isoleucine biosynthesis IV Msm_1237 PWY-7111 pyruvate fermentation to isobutanol (engineered) Msm_1246 PWY-6871 3-methylbutanol biosynthesis Msm_1253 PWY-5921 glutaminyl-tRNAgln biosynthesis via transamidation Msm_1256 PWY-6167 flavin biosynthesis II (archaea) Msm_1256 PWY-6168 flavin biosynthesis III (fungi) Msm_1257 PWY-6167 flavin biosynthesis II (archaea) Msm_1263 PWY-5686 UMP biosynthesis Msm_1267 PWY-7377 cob(II)yrinate a,c-diamide biosynthesis I (early cobalt insertion) Msm_1280 PWY-7377 cob(II)yrinate a,c-diamide biosynthesis I (early cobalt insertion) Msm_1281 PWY-7377 cob(II)yrinate a,c-diamide biosynthesis I (early cobalt insertion) Msm_1283 PWY-6893 thiamin diphosphate biosynthesis II (Bacillus) Msm_1283 PWY-6894 thiamin diphosphate biosynthesis I (E. coli) Msm_1283 PWY-6896 thiamin salvage I Msm_1283 PWY-6897 thiamin salvage II Msm_1296 PWY-6167 flavin biosynthesis II (archaea) Msm_1296 PWY-6168 flavin biosynthesis III (fungi) Msm_1307 PWY-3221 dTDP-L-rhamnose biosynthesis II Msm_1307 PWY-6808 dTDP-D-forosamine biosynthesis Msm_1307 PWY-6942 dTDP-D-desosamine biosynthesis Msm_1307 PWY-6953 dTDP-3-acetamido-3,6-dideoxy-α-D-galactose biosynthesis Msm_1307 PWY-6973 dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis Msm_1307 PWY-6974 dTDP-L-olivose biosynthesis Msm_1307 PWY-6976 dTDP-L-mycarose biosynthesis Msm_1307 PWY-7104 dTDP-L-megosamine biosynthesis Msm_1307 PWY-7301 dTDP-β-L-noviose biosynthesis Msm_1307 PWY-7312 dTDP-D-β-fucofuranose biosynthesis Msm_1307 PWY-7315 dTDP-N-acetylthomosamine biosynthesis Msm_1307 PWY-7316 dTDP-N-acetylviosamine biosynthesis Msm_1307 PWY-7318 dTDP-3-acetamido-3,6-dideoxy-α-D-glucose biosynthesis Msm_1307 PWY-7413 dTDP-6-deoxy-α-D-allose biosynthesis Msm_1307 PWY-7414 dTDP-α-D-mycaminose biosynthesis Msm_1307 PWY-7440 dTDP-β-L-4-epi-vancosamine biosynthesis Msm_1309 PWY-3221 dTDP-L-rhamnose biosynthesis II Msm_1309 PWY-6808 dTDP-D-forosamine biosynthesis Msm_1309 PWY-6942 dTDP-D-desosamine biosynthesis Msm_1309 PWY-6953 dTDP-3-acetamido-3,6-dideoxy-α-D-galactose biosynthesis Msm_1309 PWY-6973 dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis Msm_1309 PWY-6974 dTDP-L-olivose biosynthesis Msm_1309 PWY-6976 dTDP-L-mycarose biosynthesis Msm_1309 PWY-7104 dTDP-L-megosamine biosynthesis Msm_1309 PWY-7301 dTDP-β-L-noviose biosynthesis Msm_1309 PWY-7312 dTDP-D-β-fucofuranose biosynthesis Msm_1309 PWY-7315 dTDP-N-acetylthomosamine biosynthesis Msm_1309 PWY-7316 dTDP-N-acetylviosamine biosynthesis Msm_1309 PWY-7318 dTDP-3-acetamido-3,6-dideoxy-α-D-glucose biosynthesis Msm_1309 PWY-7413 dTDP-6-deoxy-α-D-allose biosynthesis Msm_1309 PWY-7414 dTDP-α-D-mycaminose biosynthesis Msm_1309 PWY-7440 dTDP-β-L-4-epi-vancosamine biosynthesis Msm_1331 PWY-6655 xanthan biosynthesis Msm_1331 PWY-6658 acetan biosynthesis Msm_1337 PWY-1622 formaldehyde assimilation I (serine pathway) Msm_1337 PWY-181 photorespiration Msm_1337 PWY-2161 folate polyglutamylation Msm_1337 PWY-2201 folate transformations I Msm_1337 PWY-3661 glycine betaine degradation I Msm_1337 PWY-3661-1 glycine betaine degradation II (mammalian) Msm_1337 PWY-3841 folate transformations II Msm_1337 PWY-5497 purine nucleobases degradation II (anaerobic) Msm_1340 PWY-5041 S-adenosyl-L-methionine cycle II Msm_1340 PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis Msm_1342 PWY-6121 5-aminoimidazole ribonucleotide biosynthesis I Msm_1342 PWY-6122 5-aminoimidazole ribonucleotide biosynthesis II Msm_1342 PWY-6277 superpathway of 5-aminoimidazole ribonucleotide biosynthesis Msm_1343 PWY-6823 molybdenum cofactor biosynthesis Msm_1358 PWY-6482 diphthamide biosynthesis (archaea) Msm_1358 PWY-7546 diphthamide biosynthesis (eukaryotes) Msm_1371 PWY-2941 L-lysine biosynthesis II Msm_1371 PWY-2942 L-lysine biosynthesis III Msm_1371 PWY-5097 L-lysine biosynthesis VI Msm_1372 PWY-2941 L-lysine biosynthesis II Msm_1372 PWY-5097 L-lysine biosynthesis VI Msm_1383 PWY-7187 pyrimidine deoxyribonucleotides de novo biosynthesis II Msm_1383 PWY-7220 adenosine deoxyribonucleotides de novo biosynthesis II Msm_1383 PWY-7222 guanosine deoxyribonucleotides de novo biosynthesis II Msm_1387 PWY-5188 tetrapyrrole biosynthesis I (from glutamate) Msm_1388 PWY-6890 4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis Msm_1404 PWY-1881 formate oxidation to CO2 Msm_1404 PWY-5497 purine nucleobases degradation II (anaerobic) Msm_1404 PWY-6696 oxalate degradation III Msm_1406 PWY-6823 molybdenum cofactor biosynthesis Msm_1412 PWY-5209 methyl-coenzyme M oxidation to CO2 Msm_1414 PWY-5209 methyl-coenzyme M oxidation to CO2 Msm_1418 PWY-381 nitrate reduction II (assimilatory) Msm_1418 PWY-5675 nitrate reduction V (assimilatory) Msm_1418 PWY-6549 L-glutamine biosynthesis III Msm_1418 PWY-6963 ammonia assimilation cycle I Msm_1418 PWY-6964 ammonia assimilation cycle II Msm_1435 PWY-1042 glycolysis IV (plant cytosol) Msm_1435 PWY-1622 formaldehyde assimilation I (serine pathway) Msm_1435 PWY-2221 Entner-Doudoroff pathway III (semi-phosphorylative) Msm_1435 PWY-5484 glycolysis II (from fructose 6-phosphate) Msm_1435 PWY-5723 Rubisco shunt Msm_1435 PWY-6142 gluconeogenesis II (Methanobacterium thermoautotrophicum) Msm_1435 PWY-6886 1-butanol autotrophic biosynthesis Msm_1435 PWY-6901 superpathway of glucose and xylose degradation Msm_1435 PWY-7003 glycerol degradation to butanol Msm_1435 PWY-7124 ethylene biosynthesis V (engineered) Msm_1435 PWY-7218 photosynthetic 3-hydroxybutanoate biosynthesis (engineered) Msm_1439 PWY-3821 galactose degradation III Msm_1439 PWY-6174 mevalonate pathway II (archaea) Msm_1439 PWY-6317 galactose degradation I (Leloir pathway) Msm_1439 PWY-6527 stachyose degradation Msm_1439 PWY-7391 isoprene biosynthesis II (engineered) Msm_1439 PWY-922 mevalonate pathway I Msm_1440 PWY-6174 mevalonate pathway II (archaea) Msm_1440 PWY-7524 mevalonate pathway III (archaea) Msm_1441 PWY-5123 trans, trans-farnesyl diphosphate biosynthesis Msm_1441 PWY-6174 mevalonate pathway II (archaea) Msm_1441 PWY-6383 mono-trans, poly-cis decaprenyl phosphate biosynthesis Msm_1441 PWY-6859 all-trans-farnesol biosynthesis Msm_1441 PWY-7102 bisabolene biosynthesis Msm_1441 PWY-7391 isoprene biosynthesis II (engineered) Msm_1441 PWY-7524 mevalonate pathway III (archaea) Msm_1441 PWY-7560 methylerythritol phosphate pathway II Msm_1441 PWY-922 mevalonate pathway I Msm_1452 PWY-5188 tetrapyrrole biosynthesis I (from glutamate) Msm_1455 PWY-5097 L-lysine biosynthesis VI Msm_1468 PWY-7219 adenosine ribonucleotides de novo biosynthesis Msm_1471 PWY-5392 reductive TCA cycle II Msm_1471 PWY-5483 pyruvate fermentation to acetate III Msm_1471 PWY-5535 acetate formation from acetyl-CoA II Msm_1471 PWY-5537 pyruvate fermentation to acetate V Msm_1471 PWY-5538 pyruvate fermentation to acetate VI Msm_1471 PWY-5690 TCA cycle II (plants and fungi) Msm_1471 PWY-5913 TCA cycle VI (obligate autotrophs) Msm_1471 PWY-6728 methylaspartate cycle Msm_1471 PWY-6969 TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase) Msm_1471 PWY-7384 anaerobic energy metabolism (invertebrates, mitochondrial) Msm_1474 PWY-6163 chorismate biosynthesis from 3-dehydroquinate Msm_1476 PWY-5188 tetrapyrrole biosynthesis I (from glutamate) Msm_1476 PWY-5189 tetrapyrrole biosynthesis II (from glycine) Msm_1477 PWY-5796 malonate decarboxylase activation Msm_1502 PWY-6397 mycolyl-arabinogalactan-peptidoglycan complex biosynthesis Msm_1502 PWY-7328 superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis Msm_1504 PWY-5188 tetrapyrrole biosynthesis I (from glutamate) Msm_1504 PWY-5189 tetrapyrrole biosynthesis II (from glycine) Msm_1513 PWY-6832 2-aminoethylphosphonate degradation II Msm_1535 PWY-6143 CMP-pseudaminate biosynthesis Msm_1535 PWY-7330 UDP-N-acetyl-β-L-fucosamine biosynthesis Msm_1535 PWY-7331 UDP-N-acetyl-β-L-quinovosamine biosynthesis Msm_1535 PWY-7332 superpathway of UDP-N-acetylglucosamine-derived O-antigen building blocks biosynthesis Msm_1537 PWY-1269 CMP-3-deoxy-D-manno-octulosonate biosynthesis I Msm_1537 PWY-5111 CMP-3-deoxy-D-manno-octulosonate biosynthesis II (from D-arabinose 5-phosphate) Msm_1538 PWY-5265 peptidoglycan biosynthesis II (staphylococci) Msm_1538 PWY-6385 peptidoglycan biosynthesis III (mycobacteria) Msm_1538 PWY-6470 peptidoglycan biosynthesis V (β-lactam resistance) Msm_1538 PWY-6471 peptidoglycan biosynthesis IV (Enterococcus faecium) Msm_1539 PWY-6143 CMP-pseudaminate biosynthesis Msm_1540 PWY-5667 CDP-diacylglycerol biosynthesis I Msm_1540 PWY-5981 CDP-diacylglycerol biosynthesis III Msm_1542 PWY-7560 methylerythritol phosphate pathway II Msm_1547 PWY-6123 inosine-5'-phosphate biosynthesis I Msm_1547 PWY-6124 inosine-5'-phosphate biosynthesis II Msm_1547 PWY-7234 inosine-5'-phosphate biosynthesis III Msm_1548 PWY-6121 5-aminoimidazole ribonucleotide biosynthesis I Msm_1548 PWY-6122 5-aminoimidazole ribonucleotide biosynthesis II Msm_1548 PWY-6277 superpathway of 5-aminoimidazole ribonucleotide biosynthesis Msm_1549 PWY-6121 5-aminoimidazole ribonucleotide biosynthesis I Msm_1549 PWY-6122 5-aminoimidazole ribonucleotide biosynthesis II Msm_1549 PWY-6277 superpathway of 5-aminoimidazole ribonucleotide biosynthesis Msm_1550 PWY-5194 siroheme biosynthesis Msm_1550 PWY-7377 cob(II)yrinate a,c-diamide biosynthesis I (early cobalt insertion) Msm_1551 PWY-6749 CMP-legionaminate biosynthesis I Msm_1557 PWY-6700 queuosine biosynthesis Msm_1557 PWY-6711 archaeosine biosynthesis Msm_1561 PWY-4381 fatty acid biosynthesis initiation I Msm_1604 PWY-3801 sucrose degradation II (sucrose synthase) Msm_1604 PWY-6527 stachyose degradation Msm_1604 PWY-6981 chitin biosynthesis Msm_1604 PWY-7238 sucrose biosynthesis II Msm_1604 PWY-7343 UDP-glucose biosynthesis Msm_1612 PWY-7346 UDP-α-D-glucuronate biosynthesis (from UDP-glucose) Msm_1617 PWY-5686 UMP biosynthesis Msm_1622 PWY-6167 flavin biosynthesis II (archaea) Msm_1622 PWY-6168 flavin biosynthesis III (fungi) Msm_1629 PWY-5695 urate biosynthesis/inosine 5'-phosphate degradation Msm_1629 PWY-6596 adenosine nucleotides degradation I Msm_1629 PWY-7221 guanosine ribonucleotides de novo biosynthesis Msm_1701 PWY-6349 CDP-archaeol biosynthesis Msm_1702 PWY-3821 galactose degradation III Msm_1702 PWY-6317 galactose degradation I (Leloir pathway) Msm_1702 PWY-6397 mycolyl-arabinogalactan-peptidoglycan complex biosynthesis Msm_1702 PWY-6527 stachyose degradation Msm_1702 PWY-7328 superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis Msm_1702 PWY-7344 UDP-D-galactose biosynthesis Msm_1704 PWY-6121 5-aminoimidazole ribonucleotide biosynthesis I Msm_1704 PWY-6122 5-aminoimidazole ribonucleotide biosynthesis II Msm_1704 PWY-6277 superpathway of 5-aminoimidazole ribonucleotide biosynthesis Msm_1704 PWY-7282 4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast) Msm_1710 PWY-6281 L-selenocysteine biosynthesis II (archaea and eukaryotes) Msm_1714 PWY-1341 phenylacetate degradation II (anaerobic) Msm_1714 PWY-6318 L-phenylalanine degradation IV (mammalian, via side chain) Msm_1734 PWY-3841 folate transformations II Msm_1734 PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I Msm_1734 PWY-7187 pyrimidine deoxyribonucleotides de novo biosynthesis II Msm_1734 PWY-7198 pyrimidine deoxyribonucleotides de novo biosynthesis IV Msm_1734 PWY-7199 pyrimidine deoxyribonucleosides salvage Msm_1734 PWY-7210 pyrimidine deoxyribonucleotides biosynthesis from CTP Msm_1792 PWY-5381 pyridine nucleotide cycling (plants)