MJ_0010 PWY-1042 glycolysis IV (plant cytosol) MJ_0010 PWY-2221 Entner-Doudoroff pathway III (semi-phosphorylative) MJ_0010 PWY-5484 glycolysis II (from fructose 6-phosphate) MJ_0010 PWY-5723 Rubisco shunt MJ_0010 PWY-6142 gluconeogenesis II (Methanobacterium thermoautotrophicum) MJ_0010 PWY-6886 1-butanol autotrophic biosynthesis MJ_0010 PWY-6901 superpathway of glucose and xylose degradation MJ_0010 PWY-7003 glycerol degradation to butanol MJ_0010 PWY-7124 ethylene biosynthesis V (engineered) MJ_0010 PWY-7218 photosynthetic 3-hydroxybutanoate biosynthesis (engineered) MJ_0022 PWY-7377 cob(II)yrinate a,c-diamide biosynthesis I (early cobalt insertion) MJ_0028 PWY-6893 thiamin diphosphate biosynthesis II (Bacillus) MJ_0028 PWY-6894 thiamin diphosphate biosynthesis I (E. coli) MJ_0028 PWY-6896 thiamin salvage I MJ_0028 PWY-6897 thiamin salvage II MJ_0044 PWY-6174 mevalonate pathway II (archaea) MJ_0044 PWY-7524 mevalonate pathway III (archaea) MJ_0050 PWY-3581 (S)-reticuline biosynthesis I MJ_0050 PWY-5254 methanofuran biosynthesis MJ_0050 PWY-5474 hydroxycinnamic acid tyramine amides biosynthesis MJ_0050 PWY-6133 (S)-reticuline biosynthesis II MJ_0050 PWY-6802 salidroside biosynthesis MJ_0050 PWY-7297 octopamine biosynthesis MJ_0055 PWY-6167 flavin biosynthesis II (archaea) MJ_0055 PWY-6168 flavin biosynthesis III (fungi) MJ_0056 PWY-6167 flavin biosynthesis II (archaea) MJ_0069 PWY-5154 L-arginine biosynthesis III (via N-acetyl-L-citrulline) MJ_0069 PWY-7400 L-arginine biosynthesis IV (archaebacteria) MJ_0092 PWY-3781 aerobic respiration I (cytochrome c) MJ_0092 PWY-4302 aerobic respiration III (alternative oxidase pathway) MJ_0092 PWY-561 superpathway of glyoxylate cycle and fatty acid degradation MJ_0092 PWY-5690 TCA cycle II (plants and fungi) MJ_0092 PWY-6728 methylaspartate cycle MJ_0092 PWY-6969 TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase) MJ_0092 PWY-7254 TCA cycle VII (acetate-producers) MJ_0092 PWY-7279 aerobic respiration II (cytochrome c) (yeast) MJ_0108 PWY-1042 glycolysis IV (plant cytosol) MJ_0108 PWY-2221 Entner-Doudoroff pathway III (semi-phosphorylative) MJ_0108 PWY-5484 glycolysis II (from fructose 6-phosphate) MJ_0108 PWY-5723 Rubisco shunt MJ_0108 PWY-6142 gluconeogenesis II (Methanobacterium thermoautotrophicum) MJ_0108 PWY-6886 1-butanol autotrophic biosynthesis MJ_0108 PWY-6901 superpathway of glucose and xylose degradation MJ_0108 PWY-7003 glycerol degradation to butanol MJ_0108 PWY-7218 photosynthetic 3-hydroxybutanoate biosynthesis (engineered) MJ_0108 PWY-7383 anaerobic energy metabolism (invertebrates, cytosol) MJ_0116 PWY-6167 flavin biosynthesis II (archaea) MJ_0122 PWY-4361 S-methyl-5-thio-α-D-ribose 1-phosphate degradation MJ_0122 PWY-5532 adenosine nucleotides degradation IV MJ_0122 PWY-7174 S-methyl-5-thio-α-D-ribose 1-phosphate degradation II MJ_0134 PWY-6829 tRNA methylation (yeast) MJ_0136 PWY-7234 inosine-5'-phosphate biosynthesis III MJ_0140 PWY-5194 siroheme biosynthesis MJ_0140 PWY-7377 cob(II)yrinate a,c-diamide biosynthesis I (early cobalt insertion) MJ_0143 PWY-5188 tetrapyrrole biosynthesis I (from glutamate) MJ_0145 PWY-6167 flavin biosynthesis II (archaea) MJ_0153 PWY-5372 carbon tetrachloride degradation II MJ_0153 PWY-6780 hydrogen production VI MJ_0161 PWY-5101 L-isoleucine biosynthesis II MJ_0161 PWY-5103 L-isoleucine biosynthesis III MJ_0161 PWY-5104 L-isoleucine biosynthesis IV MJ_0161 PWY-5938 (R)-acetoin biosynthesis I MJ_0161 PWY-5939 (R)-acetoin biosynthesis II MJ_0161 PWY-6389 (S)-acetoin biosynthesis MJ_0161 PWY-7111 pyruvate fermentation to isobutanol (engineered) MJ_0186 PWY-5154 L-arginine biosynthesis III (via N-acetyl-L-citrulline) MJ_0198 PWY-1042 glycolysis IV (plant cytosol) MJ_0198 PWY-1622 formaldehyde assimilation I (serine pathway) MJ_0198 PWY-2221 Entner-Doudoroff pathway III (semi-phosphorylative) MJ_0198 PWY-5484 glycolysis II (from fructose 6-phosphate) MJ_0198 PWY-5723 Rubisco shunt MJ_0198 PWY-6142 gluconeogenesis II (Methanobacterium thermoautotrophicum) MJ_0198 PWY-6886 1-butanol autotrophic biosynthesis MJ_0198 PWY-6901 superpathway of glucose and xylose degradation MJ_0198 PWY-7003 glycerol degradation to butanol MJ_0198 PWY-7124 ethylene biosynthesis V (engineered) MJ_0198 PWY-7218 photosynthetic 3-hydroxybutanoate biosynthesis (engineered) MJ_0203 PWY-6121 5-aminoimidazole ribonucleotide biosynthesis I MJ_0203 PWY-6122 5-aminoimidazole ribonucleotide biosynthesis II MJ_0203 PWY-6277 superpathway of 5-aminoimidazole ribonucleotide biosynthesis MJ_0204 PWY-6121 5-aminoimidazole ribonucleotide biosynthesis I MJ_0204 PWY-6122 5-aminoimidazole ribonucleotide biosynthesis II MJ_0204 PWY-6277 superpathway of 5-aminoimidazole ribonucleotide biosynthesis MJ_0204 PWY-7282 4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast) MJ_0205 PWY-2941 L-lysine biosynthesis II MJ_0205 PWY-2942 L-lysine biosynthesis III MJ_0205 PWY-5097 L-lysine biosynthesis VI MJ_0205 PWY-5154 L-arginine biosynthesis III (via N-acetyl-L-citrulline) MJ_0205 PWY-6559 spermidine biosynthesis II MJ_0205 PWY-6562 norspermidine biosynthesis MJ_0205 PWY-7153 grixazone biosynthesis MJ_0205 PWY-7400 L-arginine biosynthesis IV (archaebacteria) MJ_0210 PWY-5392 reductive TCA cycle II MJ_0210 PWY-5537 pyruvate fermentation to acetate V MJ_0210 PWY-5538 pyruvate fermentation to acetate VI MJ_0210 PWY-5690 TCA cycle II (plants and fungi) MJ_0210 PWY-5913 TCA cycle VI (obligate autotrophs) MJ_0210 PWY-6728 methylaspartate cycle MJ_0210 PWY-6969 TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase) MJ_0210 PWY-7384 anaerobic energy metabolism (invertebrates, mitochondrial) MJ_0216 PWY-7219 adenosine ribonucleotides de novo biosynthesis MJ_0217 PWY-7219 adenosine ribonucleotides de novo biosynthesis MJ_0226 PWY-7206 pyrimidine deoxyribonucleotides dephosphorylation MJ_0227 PWY-5796 malonate decarboxylase activation MJ_0232 PWY-1042 glycolysis IV (plant cytosol) MJ_0232 PWY-1622 formaldehyde assimilation I (serine pathway) MJ_0232 PWY-2221 Entner-Doudoroff pathway III (semi-phosphorylative) MJ_0232 PWY-5484 glycolysis II (from fructose 6-phosphate) MJ_0232 PWY-5723 Rubisco shunt MJ_0232 PWY-6142 gluconeogenesis II (Methanobacterium thermoautotrophicum) MJ_0232 PWY-6886 1-butanol autotrophic biosynthesis MJ_0232 PWY-6901 superpathway of glucose and xylose degradation MJ_0232 PWY-7003 glycerol degradation to butanol MJ_0232 PWY-7124 ethylene biosynthesis V (engineered) MJ_0232 PWY-7218 photosynthetic 3-hydroxybutanoate biosynthesis (engineered) MJ_0236 PWY-6893 thiamin diphosphate biosynthesis II (Bacillus) MJ_0236 PWY-6894 thiamin diphosphate biosynthesis I (E. coli) MJ_0236 PWY-6897 thiamin salvage II MJ_0236 PWY-6907 thiamin diphosphate biosynthesis III (Staphylococcus) MJ_0236 PWY-6908 thiamin diphosphate biosynthesis IV (eukaryotes) MJ_0236 PWY-7353 4-methyl-5(β-hydroxyethyl)thiazole salvage (yeast) MJ_0236 PWY-7357 thiamin formation from pyrithiamine and oxythiamine (yeast) MJ_0238 PWY-5958 acridone alkaloid biosynthesis MJ_0238 PWY-6660 2-heptyl-3-hydroxy-4(1H)-quinolone biosynthesis MJ_0238 PWY-6661 4-hydroxy-2(1H)-quinolone biosynthesis MJ_0244 PWY-2941 L-lysine biosynthesis II MJ_0244 PWY-2942 L-lysine biosynthesis III MJ_0244 PWY-5097 L-lysine biosynthesis VI MJ_0246 PWY-3461 L-tyrosine biosynthesis II MJ_0246 PWY-3462 L-phenylalanine biosynthesis II MJ_0246 PWY-6120 L-tyrosine biosynthesis III MJ_0246 PWY-6627 salinosporamide A biosynthesis MJ_0252 PWY-5686 UMP biosynthesis MJ_0257 PWY-7285 methylwyosine biosynthesis MJ_0257 PWY-7286 7-(3-amino-3-carboxypropyl)-wyosine biosynthesis MJ_0277 PWY-5101 L-isoleucine biosynthesis II MJ_0277 PWY-5103 L-isoleucine biosynthesis III MJ_0277 PWY-5104 L-isoleucine biosynthesis IV MJ_0277 PWY-5938 (R)-acetoin biosynthesis I MJ_0277 PWY-5939 (R)-acetoin biosynthesis II MJ_0277 PWY-6389 (S)-acetoin biosynthesis MJ_0277 PWY-7111 pyruvate fermentation to isobutanol (engineered) MJ_0279 PWY-6349 CDP-archaeol biosynthesis MJ_0282 PWY-7204 pyridoxal 5'-phosphate salvage II (plants) MJ_0282 PWY-7282 4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast) MJ_0293 PWY-6545 pyrimidine deoxyribonucleotides de novo biosynthesis III MJ_0293 PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I MJ_0293 PWY-7187 pyrimidine deoxyribonucleotides de novo biosynthesis II MJ_0293 PWY-7197 pyrimidine deoxyribonucleotide phosphorylation MJ_0293 PWY-7198 pyrimidine deoxyribonucleotides de novo biosynthesis IV MJ_0293 PWY-7210 pyrimidine deoxyribonucleotides biosynthesis from CTP MJ_0303 PWY-6167 flavin biosynthesis II (archaea) MJ_0303 PWY-6168 flavin biosynthesis III (fungi) MJ_0309 PWY-40 putrescine biosynthesis I MJ_0309 PWY-6305 putrescine biosynthesis IV MJ_0315 PWY-6834 spermidine biosynthesis III MJ_0316 PWY-40 putrescine biosynthesis I MJ_0316 PWY-43 putrescine biosynthesis II MJ_0316 PWY-6305 putrescine biosynthesis IV MJ_0316 PWY-6834 spermidine biosynthesis III MJ_0391 PWY-7377 cob(II)yrinate a,c-diamide biosynthesis I (early cobalt insertion) MJ_0399 PWY-6749 CMP-legionaminate biosynthesis I MJ_0400 PWY-6160 3-dehydroquinate biosynthesis II (archaea) MJ_0407 PWY-5316 nicotine biosynthesis MJ_0407 PWY-7342 superpathway of nicotine biosynthesis MJ_0408 PWY-6147 6-hydroxymethyl-dihydropterin diphosphate biosynthesis I MJ_0408 PWY-6148 tetrahydromethanopterin biosynthesis MJ_0408 PWY-6797 6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea) MJ_0408 PWY-7539 6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia) MJ_0422 PWY-2941 L-lysine biosynthesis II MJ_0422 PWY-2942 L-lysine biosynthesis III MJ_0422 PWY-5097 L-lysine biosynthesis VI MJ_0429 PWY-4983 L-citrulline-nitric oxide cycle MJ_0429 PWY-4984 urea cycle MJ_0429 PWY-5 canavanine biosynthesis MJ_0429 PWY-5154 L-arginine biosynthesis III (via N-acetyl-L-citrulline) MJ_0429 PWY-7400 L-arginine biosynthesis IV (archaebacteria) MJ_0430 PWY-7187 pyrimidine deoxyribonucleotides de novo biosynthesis II MJ_0436 PWY-6700 queuosine biosynthesis MJ_0436 PWY-6711 archaeosine biosynthesis MJ_0446 PWY-5198 factor 420 biosynthesis MJ_0454 PWY-4361 S-methyl-5-thio-α-D-ribose 1-phosphate degradation MJ_0454 PWY-7174 S-methyl-5-thio-α-D-ribose 1-phosphate degradation II MJ_0479 PWY-7219 adenosine ribonucleotides de novo biosynthesis MJ_0483 PWY-6482 diphthamide biosynthesis (archaea) MJ_0483 PWY-7546 diphthamide biosynthesis (eukaryotes) MJ_0490 PWY-1622 formaldehyde assimilation I (serine pathway) MJ_0490 PWY-5392 reductive TCA cycle II MJ_0490 PWY-5481 pyruvate fermentation to lactate MJ_0490 PWY-561 superpathway of glyoxylate cycle and fatty acid degradation MJ_0490 PWY-5690 TCA cycle II (plants and fungi) MJ_0490 PWY-5913 TCA cycle VI (obligate autotrophs) MJ_0490 PWY-6728 methylaspartate cycle MJ_0490 PWY-6901 superpathway of glucose and xylose degradation MJ_0490 PWY-6969 TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase) MJ_0490 PWY-7115 C4 photosynthetic carbon assimilation cycle, NAD-ME type MJ_0490 PWY-7383 anaerobic energy metabolism (invertebrates, cytosol) MJ_0493 PWY-5316 nicotine biosynthesis MJ_0493 PWY-5381 pyridine nucleotide cycling (plants) MJ_0493 PWY-5653 NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde MJ_0493 PWY-7342 superpathway of nicotine biosynthesis MJ_0502 PWY-6163 chorismate biosynthesis from 3-dehydroquinate MJ_0503 PWY-6871 3-methylbutanol biosynthesis MJ_0504 PWY-1042 glycolysis IV (plant cytosol) MJ_0504 PWY-2221 Entner-Doudoroff pathway III (semi-phosphorylative) MJ_0504 PWY-5484 glycolysis II (from fructose 6-phosphate) MJ_0504 PWY-5723 Rubisco shunt MJ_0504 PWY-6142 gluconeogenesis II (Methanobacterium thermoautotrophicum) MJ_0504 PWY-6886 1-butanol autotrophic biosynthesis MJ_0504 PWY-6901 superpathway of glucose and xylose degradation MJ_0504 PWY-7003 glycerol degradation to butanol MJ_0504 PWY-7218 photosynthetic 3-hydroxybutanoate biosynthesis (engineered) MJ_0504 PWY-7383 anaerobic energy metabolism (invertebrates, cytosol) MJ_0511 PWY-3841 folate transformations II MJ_0511 PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I MJ_0511 PWY-7187 pyrimidine deoxyribonucleotides de novo biosynthesis II MJ_0511 PWY-7198 pyrimidine deoxyribonucleotides de novo biosynthesis IV MJ_0511 PWY-7199 pyrimidine deoxyribonucleosides salvage MJ_0511 PWY-7210 pyrimidine deoxyribonucleotides biosynthesis from CTP MJ_0532 PWY-6349 CDP-archaeol biosynthesis MJ_0539 PWY-5188 tetrapyrrole biosynthesis I (from glutamate) MJ_0551 PWY-6683 sulfate reduction III (assimilatory) MJ_0559 PWY-5381 pyridine nucleotide cycling (plants) MJ_0559 PWY-5695 urate biosynthesis/inosine 5'-phosphate degradation MJ_0559 PWY-6596 adenosine nucleotides degradation I MJ_0559 PWY-6606 guanosine nucleotides degradation II MJ_0559 PWY-6607 guanosine nucleotides degradation I MJ_0559 PWY-6608 guanosine nucleotides degradation III MJ_0559 PWY-7185 UTP and CTP dephosphorylation I MJ_0561 PWY-7219 adenosine ribonucleotides de novo biosynthesis MJ_0569 PWY-5188 tetrapyrrole biosynthesis I (from glutamate) MJ_0569 PWY-5189 tetrapyrrole biosynthesis II (from glycine) MJ_0570 PWY-6482 diphthamide biosynthesis (archaea) MJ_0570 PWY-7546 diphthamide biosynthesis (eukaryotes) MJ_0571 PWY-2941 L-lysine biosynthesis II MJ_0571 PWY-2942 L-lysine biosynthesis III MJ_0571 PWY-5097 L-lysine biosynthesis VI MJ_0571 PWY-6559 spermidine biosynthesis II MJ_0571 PWY-6562 norspermidine biosynthesis MJ_0571 PWY-7153 grixazone biosynthesis MJ_0590 PWY-5392 reductive TCA cycle II MJ_0590 PWY-5483 pyruvate fermentation to acetate III MJ_0590 PWY-5535 acetate formation from acetyl-CoA II MJ_0590 PWY-5537 pyruvate fermentation to acetate V MJ_0590 PWY-5538 pyruvate fermentation to acetate VI MJ_0590 PWY-5690 TCA cycle II (plants and fungi) MJ_0590 PWY-5913 TCA cycle VI (obligate autotrophs) MJ_0590 PWY-6728 methylaspartate cycle MJ_0590 PWY-6969 TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase) MJ_0590 PWY-7384 anaerobic energy metabolism (invertebrates, mitochondrial) MJ_0601 PWY-5532 adenosine nucleotides degradation IV MJ_0603 PWY-5188 tetrapyrrole biosynthesis I (from glutamate) MJ_0610 PWY-6281 L-selenocysteine biosynthesis II (archaea and eukaryotes) MJ_0612 PWY-7303 3-dimethylallyl-4-hydroxybenzoate biosynthesis MJ_0616 PWY-6123 inosine-5'-phosphate biosynthesis I MJ_0616 PWY-7234 inosine-5'-phosphate biosynthesis III MJ_0626 PWY-6123 inosine-5'-phosphate biosynthesis I MJ_0626 PWY-6124 inosine-5'-phosphate biosynthesis II MJ_0626 PWY-7234 inosine-5'-phosphate biosynthesis III MJ_0637 PWY-7432 L-phenylalanine biosynthesis III (cytosolic, plants) MJ_0641 PWY-1042 glycolysis IV (plant cytosol) MJ_0641 PWY-5484 glycolysis II (from fructose 6-phosphate) MJ_0641 PWY-6886 1-butanol autotrophic biosynthesis MJ_0641 PWY-6901 superpathway of glucose and xylose degradation MJ_0641 PWY-7003 glycerol degradation to butanol MJ_0643 PWY-5188 tetrapyrrole biosynthesis I (from glutamate) MJ_0643 PWY-5189 tetrapyrrole biosynthesis II (from glycine) MJ_0656 PWY-7205 CMP phosphorylation MJ_0666 PWY-6823 molybdenum cofactor biosynthesis MJ_0667 PWY-5532 adenosine nucleotides degradation IV MJ_0671 PWY-6167 flavin biosynthesis II (archaea) MJ_0671 PWY-6168 flavin biosynthesis III (fungi) MJ_0677 PWY-6891 thiazole biosynthesis II (Bacillus) MJ_0677 PWY-6892 thiazole biosynthesis I (E. coli) MJ_0679 PWY-6891 thiazole biosynthesis II (Bacillus) MJ_0679 PWY-6892 thiazole biosynthesis I (E. coli) MJ_0679 PWY-7560 methylerythritol phosphate pathway II MJ_0680 PWY-1861 formaldehyde assimilation II (RuMP Cycle) MJ_0680 PWY-5723 Rubisco shunt MJ_0681 PWY-6891 thiazole biosynthesis II (Bacillus) MJ_0681 PWY-6892 thiazole biosynthesis I (E. coli) MJ_0681 PWY-7560 methylerythritol phosphate pathway II MJ_0705 PWY-6174 mevalonate pathway II (archaea) MJ_0705 PWY-7391 isoprene biosynthesis II (engineered) MJ_0705 PWY-7524 mevalonate pathway III (archaea) MJ_0705 PWY-922 mevalonate pathway I MJ_0712 PWY-6349 CDP-archaeol biosynthesis MJ_0717 PWY-6823 molybdenum cofactor biosynthesis MJ_0728 PWY-5372 carbon tetrachloride degradation II MJ_0728 PWY-6780 hydrogen production VI MJ_0743 PWY-5207 coenzyme B/coenzyme M regeneration MJ_0744 PWY-5207 coenzyme B/coenzyme M regeneration MJ_0768 PWY-5199 factor 420 polyglutamylation MJ_0771 PWY-5194 siroheme biosynthesis MJ_0771 PWY-7377 cob(II)yrinate a,c-diamide biosynthesis I (early cobalt insertion) MJ_0775 PWY-5663 tetrahydrobiopterin biosynthesis I MJ_0775 PWY-5664 tetrahydrobiopterin biosynthesis II MJ_0775 PWY-6147 6-hydroxymethyl-dihydropterin diphosphate biosynthesis I MJ_0775 PWY-6703 preQ0 biosynthesis MJ_0775 PWY-6797 6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea) MJ_0775 PWY-6983 tetrahydrobiopterin biosynthesis III MJ_0775 PWY-7442 drosopterin and aurodrosopterin biosynthesis MJ_0783 PWY-5651 L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde MJ_0783 PWY-6309 L-tryptophan degradation XI (mammalian, via kynurenine) MJ_0785 PWY-7380 biotin biosynthesis from 8-amino-7-oxononanoate II MJ_0791 PWY-4983 L-citrulline-nitric oxide cycle MJ_0791 PWY-4984 urea cycle MJ_0791 PWY-5 canavanine biosynthesis MJ_0791 PWY-5154 L-arginine biosynthesis III (via N-acetyl-L-citrulline) MJ_0791 PWY-7400 L-arginine biosynthesis IV (archaebacteria) MJ_0799 PWY-6893 thiamin diphosphate biosynthesis II (Bacillus) MJ_0799 PWY-6894 thiamin diphosphate biosynthesis I (E. coli) MJ_0799 PWY-6896 thiamin salvage I MJ_0799 PWY-6897 thiamin salvage II MJ_0804 PWY-6823 molybdenum cofactor biosynthesis MJ_0817 PWY-5669 phosphatidylethanolamine biosynthesis I MJ_0824 PWY-6823 molybdenum cofactor biosynthesis MJ_0862 PWY-5123 trans, trans-farnesyl diphosphate biosynthesis MJ_0862 PWY-6174 mevalonate pathway II (archaea) MJ_0862 PWY-6383 mono-trans, poly-cis decaprenyl phosphate biosynthesis MJ_0862 PWY-6859 all-trans-farnesol biosynthesis MJ_0862 PWY-7102 bisabolene biosynthesis MJ_0862 PWY-7391 isoprene biosynthesis II (engineered) MJ_0862 PWY-7524 mevalonate pathway III (archaea) MJ_0862 PWY-7560 methylerythritol phosphate pathway II MJ_0862 PWY-922 mevalonate pathway I MJ_0863 PWY-5207 coenzyme B/coenzyme M regeneration MJ_0864 PWY-5207 coenzyme B/coenzyme M regeneration MJ_0870 PWY-6683 sulfate reduction III (assimilatory) MJ_0881 PWY-4981 L-proline biosynthesis II (from arginine) MJ_0881 PWY-4984 urea cycle MJ_0881 PWY-7400 L-arginine biosynthesis IV (archaebacteria) MJ_0883 PWY-6829 tRNA methylation (yeast) MJ_0883 PWY-7285 methylwyosine biosynthesis MJ_0883 PWY-7286 7-(3-amino-3-carboxypropyl)-wyosine biosynthesis MJ_0886 PWY-6823 molybdenum cofactor biosynthesis MJ_0887 PWY-5198 factor 420 biosynthesis MJ_0907 PWY-6823 molybdenum cofactor biosynthesis MJ_0908 PWY-5531 chlorophyllide a biosynthesis II (anaerobic) MJ_0908 PWY-7159 chlorophyllide a biosynthesis III (aerobic, light independent) MJ_0917 PWY-5083 NAD/NADH phosphorylation and dephosphorylation MJ_0917 PWY-7268 NAD/NADP-NADH/NADPH cytosolic interconversion (yeast) MJ_0917 PWY-7269 NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast) MJ_0927 PWY-5663 tetrahydrobiopterin biosynthesis I MJ_0927 PWY-5664 tetrahydrobiopterin biosynthesis II MJ_0927 PWY-6147 6-hydroxymethyl-dihydropterin diphosphate biosynthesis I MJ_0927 PWY-6703 preQ0 biosynthesis MJ_0927 PWY-6983 tetrahydrobiopterin biosynthesis III MJ_0927 PWY-7442 drosopterin and aurodrosopterin biosynthesis MJ_0929 PWY-6123 inosine-5'-phosphate biosynthesis I MJ_0929 PWY-6124 inosine-5'-phosphate biosynthesis II MJ_0929 PWY-7219 adenosine ribonucleotides de novo biosynthesis MJ_0929 PWY-7234 inosine-5'-phosphate biosynthesis III MJ_0937 PWY-6121 5-aminoimidazole ribonucleotide biosynthesis I MJ_0937 PWY-6122 5-aminoimidazole ribonucleotide biosynthesis II MJ_0937 PWY-6277 superpathway of 5-aminoimidazole ribonucleotide biosynthesis MJ_0946 PWY-6829 tRNA methylation (yeast) MJ_0959 PWY-6832 2-aminoethylphosphonate degradation II MJ_0960 PWY-1861 formaldehyde assimilation II (RuMP Cycle) MJ_0960 PWY-5723 Rubisco shunt MJ_0965 PWY-5194 siroheme biosynthesis MJ_0965 PWY-7377 cob(II)yrinate a,c-diamide biosynthesis I (early cobalt insertion) MJ_0969 PWY-6654 phosphopantothenate biosynthesis III MJ_0970 PWY-7377 cob(II)yrinate a,c-diamide biosynthesis I (early cobalt insertion) MJ_0994 PWY-5188 tetrapyrrole biosynthesis I (from glutamate) MJ_0994 PWY-5189 tetrapyrrole biosynthesis II (from glycine) MJ_1002 PWY-1042 glycolysis IV (plant cytosol) MJ_1002 PWY-2221 Entner-Doudoroff pathway III (semi-phosphorylative) MJ_1002 PWY-5484 glycolysis II (from fructose 6-phosphate) MJ_1002 PWY-5723 Rubisco shunt MJ_1002 PWY-6142 gluconeogenesis II (Methanobacterium thermoautotrophicum) MJ_1002 PWY-6886 1-butanol autotrophic biosynthesis MJ_1002 PWY-6901 superpathway of glucose and xylose degradation MJ_1002 PWY-7003 glycerol degradation to butanol MJ_1002 PWY-7218 photosynthetic 3-hydroxybutanoate biosynthesis (engineered) MJ_1002 PWY-7383 anaerobic energy metabolism (invertebrates, cytosol) MJ_1008 PWY-5057 L-valine degradation II MJ_1008 PWY-5076 L-leucine degradation III MJ_1008 PWY-5078 L-isoleucine degradation II MJ_1008 PWY-5101 L-isoleucine biosynthesis II MJ_1008 PWY-5103 L-isoleucine biosynthesis III MJ_1008 PWY-5104 L-isoleucine biosynthesis IV MJ_1008 PWY-5108 L-isoleucine biosynthesis V MJ_1016 PWY-6703 preQ0 biosynthesis MJ_1019 PWY-5154 L-arginine biosynthesis III (via N-acetyl-L-citrulline) MJ_1019 PWY-5686 UMP biosynthesis MJ_1019 PWY-7400 L-arginine biosynthesis IV (archaebacteria) MJ_1022 PWY-6700 queuosine biosynthesis MJ_1022 PWY-6711 archaeosine biosynthesis MJ_1026 PWY-6890 4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis MJ_1035 PWY-5198 factor 420 biosynthesis MJ_1050 PWY-7219 adenosine ribonucleotides de novo biosynthesis MJ_1054 PWY-7346 UDP-α-D-glucuronate biosynthesis (from UDP-glucose) MJ_1062 PWY-5265 peptidoglycan biosynthesis II (staphylococci) MJ_1062 PWY-6385 peptidoglycan biosynthesis III (mycobacteria) MJ_1062 PWY-6470 peptidoglycan biosynthesis V (β-lactam resistance) MJ_1062 PWY-6471 peptidoglycan biosynthesis IV (Enterococcus faecium) MJ_1063 PWY-1269 CMP-3-deoxy-D-manno-octulosonate biosynthesis I MJ_1063 PWY-5111 CMP-3-deoxy-D-manno-octulosonate biosynthesis II (from D-arabinose 5-phosphate) MJ_1075 PWY-5958 acridone alkaloid biosynthesis MJ_1075 PWY-6660 2-heptyl-3-hydroxy-4(1H)-quinolone biosynthesis MJ_1075 PWY-6661 4-hydroxy-2(1H)-quinolone biosynthesis MJ_1077 PWY-6281 L-selenocysteine biosynthesis II (archaea and eukaryotes) MJ_1084 PWY-6163 chorismate biosynthesis from 3-dehydroquinate MJ_1087 PWY-3821 galactose degradation III MJ_1087 PWY-6174 mevalonate pathway II (archaea) MJ_1087 PWY-6317 galactose degradation I (Leloir pathway) MJ_1087 PWY-6527 stachyose degradation MJ_1087 PWY-7391 isoprene biosynthesis II (engineered) MJ_1087 PWY-922 mevalonate pathway I MJ_1096 PWY-5154 L-arginine biosynthesis III (via N-acetyl-L-citrulline) MJ_1096 PWY-7400 L-arginine biosynthesis IV (archaebacteria) MJ_1097 PWY-2941 L-lysine biosynthesis II MJ_1097 PWY-2942 L-lysine biosynthesis III MJ_1097 PWY-5097 L-lysine biosynthesis VI MJ_1100 PWY-6749 CMP-legionaminate biosynthesis I MJ_1101 PWY-5514 UDP-N-acetyl-D-galactosamine biosynthesis II MJ_1102 PWY-6545 pyrimidine deoxyribonucleotides de novo biosynthesis III MJ_1102 PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I MJ_1102 PWY-7187 pyrimidine deoxyribonucleotides de novo biosynthesis II MJ_1102 PWY-7206 pyrimidine deoxyribonucleotides dephosphorylation MJ_1104 PWY-702 L-methionine biosynthesis II MJ_1109 PWY-5686 UMP biosynthesis MJ_1113 PWY-5265 peptidoglycan biosynthesis II (staphylococci) MJ_1113 PWY-6470 peptidoglycan biosynthesis V (β-lactam resistance) MJ_1113 PWY-6471 peptidoglycan biosynthesis IV (Enterococcus faecium) MJ_1117 PWY-5508 adenosylcobalamin biosynthesis from cobyrinate a,c-diamide II MJ_1117 PWY-5509 adenosylcobalamin biosynthesis from cobyrinate a,c-diamide I MJ_1117 PWY-6269 adenosylcobalamin salvage from cobinamide II MJ_1119 PWY-2941 L-lysine biosynthesis II MJ_1119 PWY-5097 L-lysine biosynthesis VI MJ_1128 PWY-6558 heparan sulfate biosynthesis (late stages) MJ_1131 PWY-7221 guanosine ribonucleotides de novo biosynthesis MJ_1144 PWY-7377 cob(II)yrinate a,c-diamide biosynthesis I (early cobalt insertion) MJ_1160 PWY-5921 glutaminyl-tRNAgln biosynthesis via transamidation MJ_1171 PWY-5209 methyl-coenzyme M oxidation to CO2 MJ_1174 PWY-7176 UTP and CTP de novo biosynthesis MJ_1174 PWY-7177 UTP and CTP dephosphorylation II MJ_1174 PWY-7185 UTP and CTP dephosphorylation I MJ_1175 PWY-6163 chorismate biosynthesis from 3-dehydroquinate MJ_1179 PWY-6167 flavin biosynthesis II (archaea) MJ_1179 PWY-6168 flavin biosynthesis III (fungi) MJ_1184 PWY-6167 flavin biosynthesis II (archaea) MJ_1184 PWY-6168 flavin biosynthesis III (fungi) MJ_1195 PWY-6871 3-methylbutanol biosynthesis MJ_1208 PWY-5041 S-adenosyl-L-methionine cycle II MJ_1208 PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis MJ_1212 PWY-5669 phosphatidylethanolamine biosynthesis I MJ_1235 PWY-5532 adenosine nucleotides degradation IV MJ_1235 PWY-5723 Rubisco shunt MJ_1246 PWY-5392 reductive TCA cycle II MJ_1246 PWY-5537 pyruvate fermentation to acetate V MJ_1246 PWY-5538 pyruvate fermentation to acetate VI MJ_1246 PWY-5690 TCA cycle II (plants and fungi) MJ_1246 PWY-5913 TCA cycle VI (obligate autotrophs) MJ_1246 PWY-6728 methylaspartate cycle MJ_1246 PWY-6969 TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase) MJ_1246 PWY-7384 anaerobic energy metabolism (invertebrates, mitochondrial) MJ_1249 PWY-6160 3-dehydroquinate biosynthesis II (archaea) MJ_1250 PWY-6349 CDP-archaeol biosynthesis MJ_1256 PWY-5198 factor 420 biosynthesis MJ_1264 PWY-6121 5-aminoimidazole ribonucleotide biosynthesis I MJ_1264 PWY-6122 5-aminoimidazole ribonucleotide biosynthesis II MJ_1264 PWY-6277 superpathway of 5-aminoimidazole ribonucleotide biosynthesis MJ_1265 PWY-6545 pyrimidine deoxyribonucleotides de novo biosynthesis III MJ_1265 PWY-7176 UTP and CTP de novo biosynthesis MJ_1265 PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I MJ_1265 PWY-7187 pyrimidine deoxyribonucleotides de novo biosynthesis II MJ_1265 PWY-7197 pyrimidine deoxyribonucleotide phosphorylation MJ_1265 PWY-7198 pyrimidine deoxyribonucleotides de novo biosynthesis IV MJ_1265 PWY-7205 CMP phosphorylation MJ_1265 PWY-7210 pyrimidine deoxyribonucleotides biosynthesis from CTP MJ_1265 PWY-7220 adenosine deoxyribonucleotides de novo biosynthesis II MJ_1265 PWY-7221 guanosine ribonucleotides de novo biosynthesis MJ_1265 PWY-7222 guanosine deoxyribonucleotides de novo biosynthesis II MJ_1265 PWY-7224 purine deoxyribonucleosides salvage MJ_1265 PWY-7226 guanosine deoxyribonucleotides de novo biosynthesis I MJ_1265 PWY-7227 adenosine deoxyribonucleotides de novo biosynthesis MJ_1274 PWY-6482 diphthamide biosynthesis (archaea) MJ_1276 PWY-5101 L-isoleucine biosynthesis II MJ_1276 PWY-5103 L-isoleucine biosynthesis III MJ_1276 PWY-5104 L-isoleucine biosynthesis IV MJ_1276 PWY-7111 pyruvate fermentation to isobutanol (engineered) MJ_1296 PWY-7380 biotin biosynthesis from 8-amino-7-oxononanoate II MJ_1297 PWY-6578 8-amino-7-oxononanoate biosynthesis III MJ_1298 PWY-6519 8-amino-7-oxononanoate biosynthesis I MJ_1298 PWY-6578 8-amino-7-oxononanoate biosynthesis III MJ_1298 PWY-7147 8-amino-7-oxononanoate biosynthesis II MJ_1299 PWY-7380 biotin biosynthesis from 8-amino-7-oxononanoate II MJ_1334 PWY-3801 sucrose degradation II (sucrose synthase) MJ_1334 PWY-6527 stachyose degradation MJ_1334 PWY-6981 chitin biosynthesis MJ_1334 PWY-7238 sucrose biosynthesis II MJ_1334 PWY-7343 UDP-glucose biosynthesis MJ_1346 PWY-381 nitrate reduction II (assimilatory) MJ_1346 PWY-5675 nitrate reduction V (assimilatory) MJ_1346 PWY-6549 L-glutamine biosynthesis III MJ_1346 PWY-6963 ammonia assimilation cycle I MJ_1346 PWY-6964 ammonia assimilation cycle II MJ_1347 PWY-6703 preQ0 biosynthesis MJ_1361 PWY-5199 factor 420 polyglutamylation MJ_1377 PWY-5188 tetrapyrrole biosynthesis I (from glutamate) MJ_1378 PWY-5154 L-arginine biosynthesis III (via N-acetyl-L-citrulline) MJ_1378 PWY-5686 UMP biosynthesis MJ_1378 PWY-7400 L-arginine biosynthesis IV (archaebacteria) MJ_1381 PWY-5154 L-arginine biosynthesis III (via N-acetyl-L-citrulline) MJ_1381 PWY-5686 UMP biosynthesis MJ_1381 PWY-7400 L-arginine biosynthesis IV (archaebacteria) MJ_1388 PWY-5041 S-adenosyl-L-methionine cycle II MJ_1392 PWY-5101 L-isoleucine biosynthesis II MJ_1392 PWY-6871 3-methylbutanol biosynthesis MJ_1416 PWY-6893 thiamin diphosphate biosynthesis II (Bacillus) MJ_1416 PWY-6894 thiamin diphosphate biosynthesis I (E. coli) MJ_1416 PWY-6896 thiamin salvage I MJ_1416 PWY-6897 thiamin salvage II MJ_1420 PWY-6749 CMP-legionaminate biosynthesis I MJ_1424 PWY-6689 tRNA splicing MJ_1427 PWY-6148 tetrahydromethanopterin biosynthesis MJ_1431 PWY-5198 factor 420 biosynthesis MJ_1438 PWY-5508 adenosylcobalamin biosynthesis from cobyrinate a,c-diamide II MJ_1438 PWY-5509 adenosylcobalamin biosynthesis from cobyrinate a,c-diamide I MJ_1438 PWY-6269 adenosylcobalamin salvage from cobinamide II MJ_1440 PWY-6163 chorismate biosynthesis from 3-dehydroquinate MJ_1447 PWY-1723 formaldehyde oxidation V (H4MPT pathway) MJ_1447 PWY-1861 formaldehyde assimilation II (RuMP Cycle) MJ_1447 PWY-5686 UMP biosynthesis MJ_1454 PWY-6163 chorismate biosynthesis from 3-dehydroquinate MJ_1454 PWY-6416 quinate degradation II MJ_1454 PWY-6707 gallate biosynthesis MJ_1459 PWY-6610 adenine and adenosine salvage IV MJ_1473 PWY-5041 S-adenosyl-L-methionine cycle II MJ_1473 PWY-6151 S-adenosyl-L-methionine cycle I MJ_1473 PWY-6936 seleno-amino acid biosynthesis MJ_1473 PWY-702 L-methionine biosynthesis II MJ_1490 PWY-5686 UMP biosynthesis MJ_1504 PWY-7335 UDP-N-acetyl-α-D-mannosaminouronate biosynthesis MJ_1510 PWY-7286 7-(3-amino-3-carboxypropyl)-wyosine biosynthesis MJ_1528 PWY-1042 glycolysis IV (plant cytosol) MJ_1528 PWY-5484 glycolysis II (from fructose 6-phosphate) MJ_1528 PWY-6142 gluconeogenesis II (Methanobacterium thermoautotrophicum) MJ_1528 PWY-7003 glycerol degradation to butanol MJ_1538 PWY-6281 L-selenocysteine biosynthesis II (archaea and eukaryotes) MJ_1543 PWY-5101 L-isoleucine biosynthesis II MJ_1543 PWY-5103 L-isoleucine biosynthesis III MJ_1543 PWY-5104 L-isoleucine biosynthesis IV MJ_1543 PWY-7111 pyruvate fermentation to isobutanol (engineered) MJ_1546 PWY-4381 fatty acid biosynthesis initiation I MJ_1557 PWY-6829 tRNA methylation (yeast) MJ_1557 PWY-7285 methylwyosine biosynthesis MJ_1557 PWY-7286 7-(3-amino-3-carboxypropyl)-wyosine biosynthesis MJ_1559 PWY-6545 pyrimidine deoxyribonucleotides de novo biosynthesis III MJ_1559 PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I MJ_1559 PWY-7185 UTP and CTP dephosphorylation I MJ_1559 PWY-7198 pyrimidine deoxyribonucleotides de novo biosynthesis IV MJ_1559 PWY-7210 pyrimidine deoxyribonucleotides biosynthesis from CTP MJ_1575 PWY-7221 guanosine ribonucleotides de novo biosynthesis MJ_1578 PWY-5194 siroheme biosynthesis MJ_1578 PWY-7377 cob(II)yrinate a,c-diamide biosynthesis I (early cobalt insertion) MJ_1581 PWY-5686 UMP biosynthesis MJ_1586 PWY-6938 NADH repair MJ_1592 PWY-6123 inosine-5'-phosphate biosynthesis I MJ_1592 PWY-6124 inosine-5'-phosphate biosynthesis II MJ_1592 PWY-7234 inosine-5'-phosphate biosynthesis III MJ_1593 PWY-6121 5-aminoimidazole ribonucleotide biosynthesis I MJ_1593 PWY-6122 5-aminoimidazole ribonucleotide biosynthesis II MJ_1593 PWY-6277 superpathway of 5-aminoimidazole ribonucleotide biosynthesis MJ_1597 PWY-1622 formaldehyde assimilation I (serine pathway) MJ_1597 PWY-181 photorespiration MJ_1597 PWY-2161 folate polyglutamylation MJ_1597 PWY-2201 folate transformations I MJ_1597 PWY-3661 glycine betaine degradation I MJ_1597 PWY-3661-1 glycine betaine degradation II (mammalian) MJ_1597 PWY-3841 folate transformations II MJ_1597 PWY-5497 purine nucleobases degradation II (anaerobic) MJ_1598 PWY-5508 adenosylcobalamin biosynthesis from cobyrinate a,c-diamide II MJ_1598 PWY-5509 adenosylcobalamin biosynthesis from cobyrinate a,c-diamide I MJ_1598 PWY-6269 adenosylcobalamin salvage from cobinamide II MJ_1603 PWY-1861 formaldehyde assimilation II (RuMP Cycle) MJ_1603 PWY-5723 Rubisco shunt MJ_1604 PWY-6142 gluconeogenesis II (Methanobacterium thermoautotrophicum) MJ_1605 PWY-3801 sucrose degradation II (sucrose synthase) MJ_1605 PWY-5054 sorbitol biosynthesis I MJ_1605 PWY-5384 sucrose degradation IV (sucrose phosphorylase) MJ_1605 PWY-5514 UDP-N-acetyl-D-galactosamine biosynthesis II MJ_1605 PWY-5659 GDP-mannose biosynthesis MJ_1605 PWY-6142 gluconeogenesis II (Methanobacterium thermoautotrophicum) MJ_1605 PWY-621 sucrose degradation III (sucrose invertase) MJ_1605 PWY-622 starch biosynthesis MJ_1605 PWY-6531 mannitol cycle MJ_1605 PWY-6981 chitin biosynthesis MJ_1605 PWY-7238 sucrose biosynthesis II MJ_1605 PWY-7347 sucrose biosynthesis III MJ_1605 PWY-7385 1,3-propanediol biosynthesis (engineered) MJ_1606 PWY-622 starch biosynthesis MJ_1610 PWY-5767 MJ_1610|MJ_1610|NP_248620.1|GeneID:1452519 MJ_1612 PWY-1042 glycolysis IV (plant cytosol) MJ_1612 PWY-2221 Entner-Doudoroff pathway III (semi-phosphorylative) MJ_1612 PWY-5484 glycolysis II (from fructose 6-phosphate) MJ_1612 PWY-5723 Rubisco shunt MJ_1612 PWY-6142 gluconeogenesis II (Methanobacterium thermoautotrophicum) MJ_1612 PWY-6886 1-butanol autotrophic biosynthesis MJ_1612 PWY-6901 superpathway of glucose and xylose degradation MJ_1612 PWY-7003 glycerol degradation to butanol MJ_1612 PWY-7124 ethylene biosynthesis V (engineered) MJ_1612 PWY-7218 photosynthetic 3-hydroxybutanoate biosynthesis (engineered) MJ_1616 PWY-5695 urate biosynthesis/inosine 5'-phosphate degradation MJ_1616 PWY-6596 adenosine nucleotides degradation I MJ_1616 PWY-7221 guanosine ribonucleotides de novo biosynthesis MJ_1619 PWY-6987 lipoate biosynthesis and incorporation III (Bacillus) MJ_1619 PWY-7381 lipoate biosynthesis and incorporation (glycine cleavage system, yeast) MJ_1631 PWY-5941 glycogen degradation II (eukaryotic) MJ_1631 PWY-622 starch biosynthesis MJ_1631 PWY-6731 starch degradation III MJ_1631 PWY-6737 starch degradation V MJ_1631 PWY-7238 sucrose biosynthesis II MJ_1634 PWY-6147 6-hydroxymethyl-dihydropterin diphosphate biosynthesis I MJ_1634 PWY-6148 tetrahydromethanopterin biosynthesis MJ_1634 PWY-6797 6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea) MJ_1634 PWY-6898 thiamin salvage III MJ_1634 PWY-6907 thiamin diphosphate biosynthesis III (Staphylococcus) MJ_1634 PWY-6908 thiamin diphosphate biosynthesis IV (eukaryotes) MJ_1634 PWY-7539 6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia) MJ_1645 PWY-6703 preQ0 biosynthesis MJ_1648 PWY-6121 5-aminoimidazole ribonucleotide biosynthesis I MJ_1648 PWY-6122 5-aminoimidazole ribonucleotide biosynthesis II MJ_1648 PWY-6277 superpathway of 5-aminoimidazole ribonucleotide biosynthesis MJ_1660 PWY-6308 L-cysteine biosynthesis II (tRNA-dependent) MJ_1663 PWY-5964 guanylyl molybdenum cofactor biosynthesis MJ_1678 PWY-6308 L-cysteine biosynthesis II (tRNA-dependent)