LRC114	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
LRC114	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
LRC114	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
LRC115	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
LRC115	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
LRC115	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
LRC13	PWY-1341	phenylacetate degradation II (anaerobic)
LRC13	PWY-6318	L-phenylalanine degradation IV (mammalian, via side chain)
LRC14	PWY-1341	phenylacetate degradation II (anaerobic)
LRC14	PWY-6318	L-phenylalanine degradation IV (mammalian, via side chain)
LRC143	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
LRC143	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
LRC143	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
LRC143	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
LRC143	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
LRC143	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
LRC143	PWY-7205	CMP phosphorylation
LRC143	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
LRC143	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
LRC143	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
LRC143	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
LRC143	PWY-7224	purine deoxyribonucleosides salvage
LRC143	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
LRC143	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
LRC156	PWY-6167	flavin biosynthesis II (archaea)
LRC156	PWY-6168	flavin biosynthesis III (fungi)
LRC161	PWY-6854	ethylene biosynthesis III (microbes)
LRC185	PWY-6148	tetrahydromethanopterin biosynthesis
LRC194	PWY-5663	tetrahydrobiopterin biosynthesis I
LRC194	PWY-5664	tetrahydrobiopterin biosynthesis II
LRC194	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
LRC194	PWY-6703	preQ<sub>0</sub> biosynthesis
LRC194	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
LRC194	PWY-6983	tetrahydrobiopterin biosynthesis III
LRC194	PWY-7442	drosopterin and aurodrosopterin biosynthesis
LRC224	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
LRC233	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
LRC233	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
LRC233	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
LRC233	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
LRC238	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
LRC238	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
LRC238	PWY-6269	adenosylcobalamin salvage from cobinamide II
LRC280	PWY-6700	queuosine biosynthesis
LRC280	PWY-6711	archaeosine biosynthesis
LRC283	PWY-1042	glycolysis IV (plant cytosol)
LRC283	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
LRC283	PWY-5484	glycolysis II (from fructose 6-phosphate)
LRC283	PWY-5723	Rubisco shunt
LRC283	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
LRC283	PWY-6886	1-butanol autotrophic biosynthesis
LRC283	PWY-6901	superpathway of glucose and xylose degradation
LRC283	PWY-7003	glycerol degradation to butanol
LRC283	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
LRC283	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
LRC306	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
LRC337	PWY-3841	folate transformations II
LRC337	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
LRC337	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
LRC337	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
LRC337	PWY-7199	pyrimidine deoxyribonucleosides salvage
LRC337	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
LRC387	PWY-6148	tetrahydromethanopterin biosynthesis
LRC397	PWY-5123	<i>trans, trans</i>-farnesyl diphosphate biosynthesis
LRC397	PWY-6174	mevalonate pathway II (archaea)
LRC397	PWY-6383	mono-<i>trans</i>, poly-<i>cis</i> decaprenyl phosphate biosynthesis
LRC397	PWY-6859	<i>all-trans</i>-farnesol biosynthesis
LRC397	PWY-7102	bisabolene biosynthesis
LRC397	PWY-7391	isoprene biosynthesis II (engineered)
LRC397	PWY-7524	mevalonate pathway III (archaea)
LRC397	PWY-7560	methylerythritol phosphate pathway II
LRC397	PWY-922	mevalonate pathway I
LRC398	PWY-6174	mevalonate pathway II (archaea)
LRC398	PWY-7524	mevalonate pathway III (archaea)
LRC399	PWY-3821	galactose degradation III
LRC399	PWY-6174	mevalonate pathway II (archaea)
LRC399	PWY-6317	galactose degradation I (Leloir pathway)
LRC399	PWY-6527	stachyose degradation
LRC399	PWY-7391	isoprene biosynthesis II (engineered)
LRC399	PWY-922	mevalonate pathway I
LRC402	PWY-1042	glycolysis IV (plant cytosol)
LRC402	PWY-1622	formaldehyde assimilation I (serine pathway)
LRC402	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
LRC402	PWY-5484	glycolysis II (from fructose 6-phosphate)
LRC402	PWY-5723	Rubisco shunt
LRC402	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
LRC402	PWY-6886	1-butanol autotrophic biosynthesis
LRC402	PWY-6901	superpathway of glucose and xylose degradation
LRC402	PWY-7003	glycerol degradation to butanol
LRC402	PWY-7124	ethylene biosynthesis V (engineered)
LRC402	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
LRC43	PWY-4261	glycerol degradation I
LRC43	PWY-6118	glycerol-3-phosphate shuttle
LRC43	PWY-6952	glycerophosphodiester degradation
LRC440	PWY-6643	coenzyme M biosynthesis II
LRC441	PWY-6637	sulfolactate degradation II
LRC441	PWY-6643	coenzyme M biosynthesis II
LRC456	PWY-5372	carbon tetrachloride degradation II
LRC456	PWY-6780	hydrogen production VI
LRC51	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
LRC51	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
LRC51	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
LRC519	PWY-5101	L-isoleucine biosynthesis II
LRC519	PWY-5103	L-isoleucine biosynthesis III
LRC519	PWY-5104	L-isoleucine biosynthesis IV
LRC519	PWY-7111	pyruvate fermentation to isobutanol (engineered)
LRC523	PWY-31	canavanine degradation
LRC523	PWY-4984	urea cycle
LRC523	PWY-6305	putrescine biosynthesis IV
LRC523	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
LRC533	PWY-5101	L-isoleucine biosynthesis II
LRC533	PWY-5103	L-isoleucine biosynthesis III
LRC533	PWY-5104	L-isoleucine biosynthesis IV
LRC533	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
LRC533	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
LRC533	PWY-6389	(<i>S</i>)-acetoin biosynthesis
LRC533	PWY-7111	pyruvate fermentation to isobutanol (engineered)
LRC534	PWY-5101	L-isoleucine biosynthesis II
LRC534	PWY-5103	L-isoleucine biosynthesis III
LRC534	PWY-5104	L-isoleucine biosynthesis IV
LRC534	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
LRC534	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
LRC534	PWY-6389	(<i>S</i>)-acetoin biosynthesis
LRC534	PWY-7111	pyruvate fermentation to isobutanol (engineered)
LRC535	PWY-5101	L-isoleucine biosynthesis II
LRC535	PWY-6871	3-methylbutanol biosynthesis
LRC54	PWY-40	putrescine biosynthesis I
LRC54	PWY-6305	putrescine biosynthesis IV
LRC62	PWY-6167	flavin biosynthesis II (archaea)
LRC62	PWY-6168	flavin biosynthesis III (fungi)
LRC63	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
LRC63	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
LRC66	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
LRC7	PWY-1341	phenylacetate degradation II (anaerobic)
LRC7	PWY-6318	L-phenylalanine degradation IV (mammalian, via side chain)
RCIX1025	PWY-6829	tRNA methylation (yeast)
RCIX1027	PWY-6174	mevalonate pathway II (archaea)
RCIX1027	PWY-7391	isoprene biosynthesis II (engineered)
RCIX1027	PWY-7524	mevalonate pathway III (archaea)
RCIX1027	PWY-922	mevalonate pathway I
RCIX1029	PWY-5686	UMP biosynthesis
RCIX1106	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
RCIX1126	PWY-5532	adenosine nucleotides degradation IV
RCIX1194	PWY-6825	phosphatidylcholine biosynthesis V
RCIX1287	PWY-6829	tRNA methylation (yeast)
RCIX1287	PWY-7285	methylwyosine biosynthesis
RCIX1287	PWY-7286	7-(3-amino-3-carboxypropyl)-wyosine biosynthesis
RCIX1312	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
RCIX1314	PWY-7303	3-dimethylallyl-4-hydroxybenzoate biosynthesis
RCIX1315	PWY-3461	L-tyrosine biosynthesis II
RCIX1315	PWY-3462	L-phenylalanine biosynthesis II
RCIX1315	PWY-6120	L-tyrosine biosynthesis III
RCIX1315	PWY-6627	salinosporamide A biosynthesis
RCIX1316	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
RCIX1322	PWY-6317	galactose degradation I (Leloir pathway)
RCIX1322	PWY-6527	stachyose degradation
RCIX1355	PWY-6829	tRNA methylation (yeast)
RCIX1355	PWY-7285	methylwyosine biosynthesis
RCIX1355	PWY-7286	7-(3-amino-3-carboxypropyl)-wyosine biosynthesis
RCIX1358	PWY-1042	glycolysis IV (plant cytosol)
RCIX1358	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
RCIX1358	PWY-5484	glycolysis II (from fructose 6-phosphate)
RCIX1358	PWY-7385	1,3-propanediol biosynthesis (engineered)
RCIX1367	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
RCIX1367	PWY-5686	UMP biosynthesis
RCIX1367	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
RCIX1369	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
RCIX1369	PWY-5686	UMP biosynthesis
RCIX1369	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
RCIX1377	PWY-4983	L-citrulline-nitric oxide cycle
RCIX1377	PWY-4984	urea cycle
RCIX1377	PWY-5	canavanine biosynthesis
RCIX1377	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
RCIX1377	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
RCIX1383	PWY-5316	nicotine biosynthesis
RCIX1383	PWY-7342	superpathway of nicotine biosynthesis
RCIX1388	PWY-6349	CDP-archaeol biosynthesis
RCIX140	PWY-5350	thiosulfate disproportionation III (rhodanese)
RCIX1434	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
RCIX1436	PWY-6749	CMP-legionaminate biosynthesis I
RCIX1437	PWY-6749	CMP-legionaminate biosynthesis I
RCIX1438	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
RCIX149	PWY-4381	fatty acid biosynthesis initiation I
RCIX1492	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
RCIX1492	PWY-5686	UMP biosynthesis
RCIX1512	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
RCIX1512	PWY-6416	quinate degradation II
RCIX1512	PWY-6707	gallate biosynthesis
RCIX1526	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
RCIX1526	PWY-6148	tetrahydromethanopterin biosynthesis
RCIX1526	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
RCIX1526	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
RCIX1540	PWY-5484	glycolysis II (from fructose 6-phosphate)
RCIX1543	PWY-3581	(<i>S</i>)-reticuline biosynthesis I
RCIX1543	PWY-5254	methanofuran biosynthesis
RCIX1543	PWY-5474	hydroxycinnamic acid tyramine amides biosynthesis
RCIX1543	PWY-6133	(S)-reticuline biosynthesis II
RCIX1543	PWY-6802	salidroside biosynthesis
RCIX1543	PWY-7297	octopamine biosynthesis
RCIX1553	PWY-6308	L-cysteine biosynthesis II (tRNA-dependent)
RCIX1554	PWY-5344	L-homocysteine biosynthesis
RCIX1554	PWY-7174	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation II
RCIX1556	PWY-5344	L-homocysteine biosynthesis
RCIX1562	PWY-6823	molybdenum cofactor biosynthesis
RCIX1562	PWY-6891	thiazole biosynthesis II (Bacillus)
RCIX1562	PWY-6892	thiazole biosynthesis I (E. coli)
RCIX1562	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
RCIX1570	PWY-6823	molybdenum cofactor biosynthesis
RCIX1570	PWY-6891	thiazole biosynthesis II (Bacillus)
RCIX1570	PWY-6892	thiazole biosynthesis I (E. coli)
RCIX1570	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
RCIX1576	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
RCIX1627	PWY-6823	molybdenum cofactor biosynthesis
RCIX1628	PWY-1881	formate oxidation to CO<sub>2</sub>
RCIX1628	PWY-5497	purine nucleobases degradation II (anaerobic)
RCIX1628	PWY-6696	oxalate degradation III
RCIX1641	PWY-5209	methyl-coenzyme M oxidation to CO<sub>2</sub>
RCIX1645	PWY-6823	molybdenum cofactor biosynthesis
RCIX1709	PWY-5941	glycogen degradation II (eukaryotic)
RCIX1709	PWY-6724	starch degradation II
RCIX1709	PWY-6737	starch degradation V
RCIX1709	PWY-7238	sucrose biosynthesis II
RCIX1736	PWY-1622	formaldehyde assimilation I (serine pathway)
RCIX1736	PWY-181	photorespiration
RCIX1736	PWY-2161	folate polyglutamylation
RCIX1736	PWY-2201	folate transformations I
RCIX1736	PWY-3661	glycine betaine degradation I
RCIX1736	PWY-3661-1	glycine betaine degradation II (mammalian)
RCIX1736	PWY-3841	folate transformations II
RCIX1736	PWY-5497	purine nucleobases degradation II (anaerobic)
RCIX1748	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
RCIX1748	PWY-7177	UTP and CTP dephosphorylation II
RCIX1748	PWY-7185	UTP and CTP dephosphorylation I
RCIX1751	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
RCIX1754	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
RCIX1754	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
RCIX1760	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
RCIX1760	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
RCIX1774	PWY-5392	reductive TCA cycle II
RCIX1774	PWY-5537	pyruvate fermentation to acetate V
RCIX1774	PWY-5538	pyruvate fermentation to acetate VI
RCIX1774	PWY-5690	TCA cycle II (plants and fungi)
RCIX1774	PWY-5913	TCA cycle VI (obligate autotrophs)
RCIX1774	PWY-6728	methylaspartate cycle
RCIX1774	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
RCIX1774	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
RCIX1777	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
RCIX1777	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
RCIX1778	PWY-1042	glycolysis IV (plant cytosol)
RCIX1778	PWY-5484	glycolysis II (from fructose 6-phosphate)
RCIX1778	PWY-6886	1-butanol autotrophic biosynthesis
RCIX1778	PWY-6901	superpathway of glucose and xylose degradation
RCIX1778	PWY-7003	glycerol degradation to butanol
RCIX1793	PWY-6871	3-methylbutanol biosynthesis
RCIX1823	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
RCIX1823	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
RCIX1823	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
RCIX1827	PWY-2941	L-lysine biosynthesis II
RCIX1827	PWY-2942	L-lysine biosynthesis III
RCIX1827	PWY-5097	L-lysine biosynthesis VI
RCIX1827	PWY-6559	spermidine biosynthesis II
RCIX1827	PWY-6562	norspermidine biosynthesis
RCIX1827	PWY-7153	grixazone biosynthesis
RCIX1833	PWY-6910	hydroxymethylpyrimidine salvage
RCIX1833	PWY-7356	thiamin salvage IV (yeast)
RCIX1833	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
RCIX1835	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
RCIX1835	PWY-5723	Rubisco shunt
RCIX1841	PWY-5101	L-isoleucine biosynthesis II
RCIX1841	PWY-5103	L-isoleucine biosynthesis III
RCIX1841	PWY-5104	L-isoleucine biosynthesis IV
RCIX1841	PWY-7111	pyruvate fermentation to isobutanol (engineered)
RCIX1842	PWY-6823	molybdenum cofactor biosynthesis
RCIX1843	PWY-5663	tetrahydrobiopterin biosynthesis I
RCIX1843	PWY-5664	tetrahydrobiopterin biosynthesis II
RCIX1843	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
RCIX1843	PWY-6703	preQ<sub>0</sub> biosynthesis
RCIX1843	PWY-6983	tetrahydrobiopterin biosynthesis III
RCIX1843	PWY-7442	drosopterin and aurodrosopterin biosynthesis
RCIX1876	PWY-1723	formaldehyde oxidation V (H<sub>4</sub>MPT pathway)
RCIX1876	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
RCIX1891	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
RCIX1891	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
RCIX1925	PWY-6703	preQ<sub>0</sub> biosynthesis
RCIX1930	PWY-7335	UDP-<i>N</i>-acetyl-&alpha;-D-mannosaminouronate biosynthesis
RCIX1962	PWY-5097	L-lysine biosynthesis VI
RCIX1963	PWY-2941	L-lysine biosynthesis II
RCIX1963	PWY-2942	L-lysine biosynthesis III
RCIX1963	PWY-5097	L-lysine biosynthesis VI
RCIX1964	PWY-2941	L-lysine biosynthesis II
RCIX1964	PWY-5097	L-lysine biosynthesis VI
RCIX198	PWY-3221	dTDP-L-rhamnose biosynthesis II
RCIX198	PWY-6808	dTDP-D-forosamine biosynthesis
RCIX198	PWY-6942	dTDP-D-desosamine biosynthesis
RCIX198	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
RCIX198	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
RCIX198	PWY-6974	dTDP-L-olivose biosynthesis
RCIX198	PWY-6976	dTDP-L-mycarose biosynthesis
RCIX198	PWY-7104	dTDP-L-megosamine biosynthesis
RCIX198	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
RCIX198	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
RCIX198	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
RCIX198	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
RCIX198	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
RCIX198	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
RCIX198	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
RCIX198	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
RCIX200	PWY-3221	dTDP-L-rhamnose biosynthesis II
RCIX200	PWY-6808	dTDP-D-forosamine biosynthesis
RCIX200	PWY-6942	dTDP-D-desosamine biosynthesis
RCIX200	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
RCIX200	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
RCIX200	PWY-6974	dTDP-L-olivose biosynthesis
RCIX200	PWY-6976	dTDP-L-mycarose biosynthesis
RCIX200	PWY-7104	dTDP-L-megosamine biosynthesis
RCIX200	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
RCIX200	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
RCIX200	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
RCIX200	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
RCIX200	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
RCIX200	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
RCIX200	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
RCIX200	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
RCIX2006	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
RCIX2030	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
RCIX2032	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
RCIX204	PWY-5738	GDP-6-deoxy-D-talose biosynthesis
RCIX204	PWY-5739	GDP-D-perosamine biosynthesis
RCIX204	PWY-5740	GDP-L-colitose biosynthesis
RCIX204	PWY-66	GDP-L-fucose biosynthesis I (from GDP-D-mannose)
RCIX2044	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
RCIX2044	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
RCIX2044	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
RCIX2044	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
RCIX2044	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
RCIX2044	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
RCIX2051	PWY-6349	CDP-archaeol biosynthesis
RCIX2086	PWY-5941	glycogen degradation II (eukaryotic)
RCIX2086	PWY-6724	starch degradation II
RCIX2086	PWY-6737	starch degradation V
RCIX2086	PWY-7238	sucrose biosynthesis II
RCIX2091	PWY-2941	L-lysine biosynthesis II
RCIX2091	PWY-2942	L-lysine biosynthesis III
RCIX2091	PWY-5097	L-lysine biosynthesis VI
RCIX2142	PWY-702	L-methionine biosynthesis II
RCIX2144	PWY-1042	glycolysis IV (plant cytosol)
RCIX2144	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
RCIX2144	PWY-5484	glycolysis II (from fructose 6-phosphate)
RCIX2144	PWY-5723	Rubisco shunt
RCIX2144	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
RCIX2144	PWY-6886	1-butanol autotrophic biosynthesis
RCIX2144	PWY-6901	superpathway of glucose and xylose degradation
RCIX2144	PWY-7003	glycerol degradation to butanol
RCIX2144	PWY-7124	ethylene biosynthesis V (engineered)
RCIX2144	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
RCIX2151	PWY-6823	molybdenum cofactor biosynthesis
RCIX2151	PWY-6891	thiazole biosynthesis II (Bacillus)
RCIX2151	PWY-6892	thiazole biosynthesis I (E. coli)
RCIX2151	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
RCIX2167	PWY-4981	L-proline biosynthesis II (from arginine)
RCIX2167	PWY-4984	urea cycle
RCIX2167	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
RCIX2194	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
RCIX2194	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
RCIX2197	PWY-6683	sulfate reduction III (assimilatory)
RCIX222	PWY-5532	adenosine nucleotides degradation IV
RCIX222	PWY-5723	Rubisco shunt
RCIX2221	PWY-5381	pyridine nucleotide cycling (plants)
RCIX2221	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
RCIX2221	PWY-6596	adenosine nucleotides degradation I
RCIX2221	PWY-6606	guanosine nucleotides degradation II
RCIX2221	PWY-6607	guanosine nucleotides degradation I
RCIX2221	PWY-6608	guanosine nucleotides degradation III
RCIX2221	PWY-7185	UTP and CTP dephosphorylation I
RCIX2225	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
RCIX2225	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
RCIX223	PWY-1281	sulfoacetaldehyde degradation I
RCIX223	PWY-5482	pyruvate fermentation to acetate II
RCIX223	PWY-5485	pyruvate fermentation to acetate IV
RCIX223	PWY-5497	purine nucleobases degradation II (anaerobic)
RCIX223	PWY-6637	sulfolactate degradation II
RCIX2230	PWY-5198	factor 420 biosynthesis
RCIX225	PWY-5316	nicotine biosynthesis
RCIX225	PWY-5381	pyridine nucleotide cycling (plants)
RCIX225	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
RCIX225	PWY-7342	superpathway of nicotine biosynthesis
RCIX2255	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
RCIX2255	PWY-5912	2'-deoxymugineic acid phytosiderophore biosynthesis
RCIX2264	PWY-4361	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation
RCIX2264	PWY-7174	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation II
RCIX2270	PWY-6308	L-cysteine biosynthesis II (tRNA-dependent)
RCIX2330	PWY-6654	phosphopantothenate biosynthesis III
RCIX2357	PWY-6938	NADH repair
RCIX236	PWY-6123	inosine-5'-phosphate biosynthesis I
RCIX236	PWY-7234	inosine-5'-phosphate biosynthesis III
RCIX2373	PWY-1881	formate oxidation to CO<sub>2</sub>
RCIX2373	PWY-5497	purine nucleobases degradation II (anaerobic)
RCIX2373	PWY-6696	oxalate degradation III
RCIX2374	PWY-7234	inosine-5'-phosphate biosynthesis III
RCIX2375	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
RCIX2375	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
RCIX2375	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
RCIX2375	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
RCIX2378	PWY-1881	formate oxidation to CO<sub>2</sub>
RCIX2378	PWY-5497	purine nucleobases degradation II (anaerobic)
RCIX2378	PWY-6696	oxalate degradation III
RCIX238	PWY-5101	L-isoleucine biosynthesis II
RCIX238	PWY-5103	L-isoleucine biosynthesis III
RCIX238	PWY-5104	L-isoleucine biosynthesis IV
RCIX238	PWY-7111	pyruvate fermentation to isobutanol (engineered)
RCIX2393	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
RCIX2393	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
RCIX2393	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
RCIX2393	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
RCIX2404	PWY-7346	UDP-&alpha;-D-glucuronate biosynthesis (from UDP-glucose)
RCIX2408	PWY-6823	molybdenum cofactor biosynthesis
RCIX2409	PWY-6749	CMP-legionaminate biosynthesis I
RCIX2420	PWY-6123	inosine-5'-phosphate biosynthesis I
RCIX2420	PWY-6124	inosine-5'-phosphate biosynthesis II
RCIX2420	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
RCIX2420	PWY-7234	inosine-5'-phosphate biosynthesis III
RCIX2430	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
RCIX2459	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
RCIX2494	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
RCIX256	PWY-6986	alginate degradation
RCIX2570	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
RCIX2574	PWY-7205	CMP phosphorylation
RCIX2647	PWY-6871	3-methylbutanol biosynthesis
RCIX2652	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
RCIX2652	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
RCIX2652	PWY-6269	adenosylcobalamin salvage from cobinamide II
RCIX2655	PWY-5443	aminopropanol phosphate biosynthesis I
RCIX2670	PWY-5651	L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
RCIX2670	PWY-6309	L-tryptophan degradation XI (mammalian, via kynurenine)
RCIX2674	PWY-6160	3-dehydroquinate biosynthesis II (archaea)
RCIX2677	PWY-6897	thiamin salvage II
RCIX2677	PWY-7353	4-methyl-5(&beta;-hydroxyethyl)thiazole salvage (yeast)
RCIX2677	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
RCIX2678	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
RCIX2678	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
RCIX2678	PWY-6897	thiamin salvage II
RCIX2678	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
RCIX2678	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
RCIX2678	PWY-7353	4-methyl-5(&beta;-hydroxyethyl)thiazole salvage (yeast)
RCIX2678	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
RCIX2688	PWY-6700	queuosine biosynthesis
RCIX2688	PWY-6711	archaeosine biosynthesis
RCIX2692	PWY-6683	sulfate reduction III (assimilatory)
RCIX2707	PWY-6829	tRNA methylation (yeast)
RCIX271	PWY-4983	L-citrulline-nitric oxide cycle
RCIX271	PWY-4984	urea cycle
RCIX271	PWY-5	canavanine biosynthesis
RCIX271	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
RCIX271	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
RCIX2717	PWY-1281	sulfoacetaldehyde degradation I
RCIX2717	PWY-5482	pyruvate fermentation to acetate II
RCIX2717	PWY-5485	pyruvate fermentation to acetate IV
RCIX2717	PWY-5497	purine nucleobases degradation II (anaerobic)
RCIX2717	PWY-6637	sulfolactate degradation II
RCIX2721	PWY-1042	glycolysis IV (plant cytosol)
RCIX2721	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
RCIX2721	PWY-5484	glycolysis II (from fructose 6-phosphate)
RCIX2721	PWY-5723	Rubisco shunt
RCIX2721	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
RCIX2721	PWY-6886	1-butanol autotrophic biosynthesis
RCIX2721	PWY-6901	superpathway of glucose and xylose degradation
RCIX2721	PWY-7003	glycerol degradation to butanol
RCIX2721	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
RCIX2721	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
RCIX2757	PWY-6890	4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis
RCIX288	PWY-5686	UMP biosynthesis
RCIX305	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
RCIX325	PWY-6823	molybdenum cofactor biosynthesis
RCIX33	PWY-6703	preQ<sub>0</sub> biosynthesis
RCIX333	PWY-3801	sucrose degradation II (sucrose synthase)
RCIX333	PWY-5054	sorbitol biosynthesis I
RCIX333	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
RCIX333	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
RCIX333	PWY-5659	GDP-mannose biosynthesis
RCIX333	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
RCIX333	PWY-621	sucrose degradation III (sucrose invertase)
RCIX333	PWY-622	starch biosynthesis
RCIX333	PWY-6531	mannitol cycle
RCIX333	PWY-6981	chitin biosynthesis
RCIX333	PWY-7238	sucrose biosynthesis II
RCIX333	PWY-7347	sucrose biosynthesis III
RCIX333	PWY-7385	1,3-propanediol biosynthesis (engineered)
RCIX36	PWY-6703	preQ<sub>0</sub> biosynthesis
RCIX363	PWY-5659	GDP-mannose biosynthesis
RCIX363	PWY-6073	alginate biosynthesis I (algal)
RCIX363	PWY-6082	alginate biosynthesis II (bacterial)
RCIX363	PWY-882	L-ascorbate biosynthesis I (L-galactose pathway)
RCIX366	PWY-1281	sulfoacetaldehyde degradation I
RCIX366	PWY-5482	pyruvate fermentation to acetate II
RCIX366	PWY-5485	pyruvate fermentation to acetate IV
RCIX366	PWY-5497	purine nucleobases degradation II (anaerobic)
RCIX366	PWY-6637	sulfolactate degradation II
RCIX376	PWY-6174	mevalonate pathway II (archaea)
RCIX376	PWY-7391	isoprene biosynthesis II (engineered)
RCIX376	PWY-7524	mevalonate pathway III (archaea)
RCIX376	PWY-922	mevalonate pathway I
RCIX381	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
RCIX381	PWY-6148	tetrahydromethanopterin biosynthesis
RCIX381	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
RCIX381	PWY-6898	thiamin salvage III
RCIX381	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
RCIX381	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
RCIX381	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
RCIX404	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
RCIX415	PWY-6711	archaeosine biosynthesis
RCIX459	PWY-5198	factor 420 biosynthesis
RCIX460	PWY-5198	factor 420 biosynthesis
RCIX461	PWY-5198	factor 420 biosynthesis
RCIX464	PWY-5198	factor 420 biosynthesis
RCIX491	PWY-6123	inosine-5'-phosphate biosynthesis I
RCIX491	PWY-6124	inosine-5'-phosphate biosynthesis II
RCIX491	PWY-7234	inosine-5'-phosphate biosynthesis III
RCIX508	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
RCIX509	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
RCIX513	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
RCIX513	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
RCIX513	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
RCIX518	PWY-5686	UMP biosynthesis
RCIX558	PWY-5057	L-valine degradation II
RCIX558	PWY-5076	L-leucine degradation III
RCIX558	PWY-5078	L-isoleucine degradation II
RCIX558	PWY-5101	L-isoleucine biosynthesis II
RCIX558	PWY-5103	L-isoleucine biosynthesis III
RCIX558	PWY-5104	L-isoleucine biosynthesis IV
RCIX558	PWY-5108	L-isoleucine biosynthesis V
RCIX563	PWY-7180	2'-deoxy-&alpha;-D-ribose 1-phosphate degradation
RCIX581	PWY-6349	CDP-archaeol biosynthesis
RCIX582	PWY-6349	CDP-archaeol biosynthesis
RCIX594	PWY-5207	coenzyme B/coenzyme M regeneration
RCIX595	PWY-5207	coenzyme B/coenzyme M regeneration
RCIX599	PWY-5209	methyl-coenzyme M oxidation to CO<sub>2</sub>
RCIX601	PWY-5209	methyl-coenzyme M oxidation to CO<sub>2</sub>
RCIX618	PWY-5941	glycogen degradation II (eukaryotic)
RCIX618	PWY-6724	starch degradation II
RCIX618	PWY-6737	starch degradation V
RCIX618	PWY-7238	sucrose biosynthesis II
RCIX619	PWY-5506	methanol oxidation to formaldehyde IV
RCIX620	PWY-6654	phosphopantothenate biosynthesis III
RCIX631	PWY-6167	flavin biosynthesis II (archaea)
RCIX632	PWY-6167	flavin biosynthesis II (archaea)
RCIX632	PWY-6168	flavin biosynthesis III (fungi)
RCIX633	PWY-5663	tetrahydrobiopterin biosynthesis I
RCIX633	PWY-5664	tetrahydrobiopterin biosynthesis II
RCIX633	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
RCIX633	PWY-6703	preQ<sub>0</sub> biosynthesis
RCIX633	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
RCIX633	PWY-6983	tetrahydrobiopterin biosynthesis III
RCIX633	PWY-7442	drosopterin and aurodrosopterin biosynthesis
RCIX649	PWY-381	nitrate reduction II (assimilatory)
RCIX649	PWY-5675	nitrate reduction V (assimilatory)
RCIX649	PWY-6549	L-glutamine biosynthesis III
RCIX649	PWY-6963	ammonia assimilation cycle I
RCIX649	PWY-6964	ammonia assimilation cycle II
RCIX661	PWY-6823	molybdenum cofactor biosynthesis
RCIX662	PWY-6823	molybdenum cofactor biosynthesis
RCIX673	PWY-6871	3-methylbutanol biosynthesis
RCIX683	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
RCIX683	PWY-6596	adenosine nucleotides degradation I
RCIX683	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
RCIX705	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
RCIX705	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
RCIX705	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
RCIX722	PWY-2941	L-lysine biosynthesis II
RCIX722	PWY-2942	L-lysine biosynthesis III
RCIX722	PWY-5097	L-lysine biosynthesis VI
RCIX722	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
RCIX722	PWY-6559	spermidine biosynthesis II
RCIX722	PWY-6562	norspermidine biosynthesis
RCIX722	PWY-7153	grixazone biosynthesis
RCIX722	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
RCIX734	PWY-2941	L-lysine biosynthesis II
RCIX734	PWY-2942	L-lysine biosynthesis III
RCIX734	PWY-5097	L-lysine biosynthesis VI
RCIX736	PWY-2941	L-lysine biosynthesis II
RCIX736	PWY-2942	L-lysine biosynthesis III
RCIX736	PWY-5097	L-lysine biosynthesis VI
RCIX747	PWY-6123	inosine-5'-phosphate biosynthesis I
RCIX747	PWY-6124	inosine-5'-phosphate biosynthesis II
RCIX747	PWY-7234	inosine-5'-phosphate biosynthesis III
RCIX750	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
RCIX750	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
RCIX770	PWY-1042	glycolysis IV (plant cytosol)
RCIX770	PWY-5484	glycolysis II (from fructose 6-phosphate)
RCIX770	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
RCIX770	PWY-7003	glycerol degradation to butanol
RCIX775	PWY-1723	formaldehyde oxidation V (H<sub>4</sub>MPT pathway)
RCIX775	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
RCIX775	PWY-5686	UMP biosynthesis
RCIX796	PWY-5958	acridone alkaloid biosynthesis
RCIX796	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
RCIX796	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
RCIX797	PWY-5958	acridone alkaloid biosynthesis
RCIX797	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
RCIX797	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
RCIX831	PWY-5392	reductive TCA cycle II
RCIX831	PWY-5483	pyruvate fermentation to acetate III
RCIX831	PWY-5535	acetate formation from acetyl-CoA II
RCIX831	PWY-5537	pyruvate fermentation to acetate V
RCIX831	PWY-5538	pyruvate fermentation to acetate VI
RCIX831	PWY-5690	TCA cycle II (plants and fungi)
RCIX831	PWY-5913	TCA cycle VI (obligate autotrophs)
RCIX831	PWY-6728	methylaspartate cycle
RCIX831	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
RCIX831	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
RCIX834	PWY-7206	pyrimidine deoxyribonucleotides dephosphorylation
RCIX838	PWY-1042	glycolysis IV (plant cytosol)
RCIX838	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
RCIX838	PWY-5484	glycolysis II (from fructose 6-phosphate)
RCIX838	PWY-5723	Rubisco shunt
RCIX838	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
RCIX838	PWY-6886	1-butanol autotrophic biosynthesis
RCIX838	PWY-6901	superpathway of glucose and xylose degradation
RCIX838	PWY-7003	glycerol degradation to butanol
RCIX838	PWY-7124	ethylene biosynthesis V (engineered)
RCIX838	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
RCIX854	PWY-5839	menaquinol-7 biosynthesis
RCIX854	PWY-5844	menaquinol-9 biosynthesis
RCIX854	PWY-5849	menaquinol-6 biosynthesis
RCIX854	PWY-5890	menaquinol-10 biosynthesis
RCIX854	PWY-5891	menaquinol-11 biosynthesis
RCIX854	PWY-5892	menaquinol-12 biosynthesis
RCIX854	PWY-5895	menaquinol-13 biosynthesis
RCIX886	PWY-5964	guanylyl molybdenum cofactor biosynthesis
RCIX909	PWY-5194	siroheme biosynthesis
RCIX909	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
RCIX911	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
RCIX912	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
RCIX912	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
RCIX913	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
RCIX914	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
RCIX914	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
RCIX915	PWY-5194	siroheme biosynthesis
RCIX915	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
RCIX916	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
RCIX916	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
RCIX942	PWY-381	nitrate reduction II (assimilatory)
RCIX942	PWY-5675	nitrate reduction V (assimilatory)
RCIX942	PWY-6549	L-glutamine biosynthesis III
RCIX942	PWY-6963	ammonia assimilation cycle I
RCIX942	PWY-6964	ammonia assimilation cycle II
RCIX953	PWY-181	photorespiration
RCIX98	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
RCIX99	PWY-6890	4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis
RRC12	PWY-6482	diphthamide biosynthesis (archaea)
RRC12	PWY-7546	diphthamide biosynthesis (eukaryotes)
RRC121	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
RRC121	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
RRC130	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
RRC130	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
RRC130	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
RRC152	PWY-6160	3-dehydroquinate biosynthesis II (archaea)
RRC153	PWY-6160	3-dehydroquinate biosynthesis II (archaea)
RRC167	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
RRC167	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
RRC167	PWY-6896	thiamin salvage I
RRC167	PWY-6897	thiamin salvage II
RRC214	PWY-6482	diphthamide biosynthesis (archaea)
RRC214	PWY-7546	diphthamide biosynthesis (eukaryotes)
RRC215	PWY-6689	tRNA splicing
RRC25	PWY-40	putrescine biosynthesis I
RRC25	PWY-43	putrescine biosynthesis II
RRC25	PWY-6305	putrescine biosynthesis IV
RRC25	PWY-6834	spermidine biosynthesis III
RRC251	PWY-1881	formate oxidation to CO<sub>2</sub>
RRC251	PWY-5497	purine nucleobases degradation II (anaerobic)
RRC251	PWY-6696	oxalate degradation III
RRC256	PWY-5207	coenzyme B/coenzyme M regeneration
RRC257	PWY-5207	coenzyme B/coenzyme M regeneration
RRC261	PWY-5209	methyl-coenzyme M oxidation to CO<sub>2</sub>
RRC263	PWY-5209	methyl-coenzyme M oxidation to CO<sub>2</sub>
RRC273	PWY-6308	L-cysteine biosynthesis II (tRNA-dependent)
RRC282	PWY-101	photosynthesis light reactions
RRC282	PWY-7230	ubiquinol-6 biosynthesis from 4-aminobenzoate (eukaryotic)
RRC292	PWY-5941	glycogen degradation II (eukaryotic)
RRC292	PWY-6724	starch degradation II
RRC292	PWY-6737	starch degradation V
RRC292	PWY-7238	sucrose biosynthesis II
RRC322	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
RRC322	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
RRC334	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
RRC334	PWY-5912	2'-deoxymugineic acid phytosiderophore biosynthesis
RRC356	PWY-5686	UMP biosynthesis
RRC379	PWY-5199	factor 420 polyglutamylation
RRC404	PWY-5796	malonate decarboxylase activation
RRC408	PWY-4361	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation
RRC408	PWY-5532	adenosine nucleotides degradation IV
RRC408	PWY-7174	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation II
RRC41	PWY-5340	sulfate activation for sulfonation
RRC421	PWY-7285	methylwyosine biosynthesis
RRC421	PWY-7286	7-(3-amino-3-carboxypropyl)-wyosine biosynthesis
RRC436	PWY-5350	thiosulfate disproportionation III (rhodanese)
RRC453	PWY-5198	factor 420 biosynthesis
RRC46	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
RRC474	PWY-7432	L-phenylalanine biosynthesis III (cytosolic, plants)
RRC481	PWY-5278	sulfite oxidation III
RRC481	PWY-5340	sulfate activation for sulfonation
RRC481	PWY-6683	sulfate reduction III (assimilatory)
RRC481	PWY-6932	selenate reduction
RRC491	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
RRC491	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
RRC491	PWY-6896	thiamin salvage I
RRC491	PWY-6897	thiamin salvage II
RRC499	PWY-1042	glycolysis IV (plant cytosol)
RRC499	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
RRC499	PWY-5484	glycolysis II (from fructose 6-phosphate)
RRC499	PWY-7385	1,3-propanediol biosynthesis (engineered)
RRC502	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
RRC502	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
RRC515	PWY-6829	tRNA methylation (yeast)
RRC515	PWY-7285	methylwyosine biosynthesis
RRC515	PWY-7286	7-(3-amino-3-carboxypropyl)-wyosine biosynthesis
RRC519	PWY-6482	diphthamide biosynthesis (archaea)
RRC53	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
RRC531	PWY-1042	glycolysis IV (plant cytosol)
RRC531	PWY-5484	glycolysis II (from fructose 6-phosphate)
RRC531	PWY-6886	1-butanol autotrophic biosynthesis
RRC531	PWY-6901	superpathway of glucose and xylose degradation
RRC531	PWY-7003	glycerol degradation to butanol
RRC55	PWY-6832	2-aminoethylphosphonate degradation II
RRC56	PWY-6167	flavin biosynthesis II (archaea)
RRC56	PWY-6168	flavin biosynthesis III (fungi)
RRC57	PWY-6167	flavin biosynthesis II (archaea)
RRC57	PWY-6168	flavin biosynthesis III (fungi)
RRC80	PWY-6160	3-dehydroquinate biosynthesis II (archaea)
RRC88	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
RRC88	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
RRC88	PWY-6936	seleno-amino acid biosynthesis
RRC88	PWY-702	L-methionine biosynthesis II
