MCON_0025	PWY-2301	<i>myo</i>-inositol biosynthesis
MCON_0025	PWY-4661	1D-<i>myo</i>-inositol hexakisphosphate biosynthesis III (<i>Spirodela polyrrhiza</i>)
MCON_0025	PWY-6372	1D-<i>myo</i>-inositol hexakisphosphate biosynthesis IV (<i>Dictyostelium</i>)
MCON_0025	PWY-6580	phosphatidylinositol biosynthesis I (bacteria)
MCON_0025	PWY-6664	di-myo-inositol phosphate biosynthesis
MCON_0073	PWY-5796	malonate decarboxylase activation
MCON_0086	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
MCON_0086	PWY-5686	UMP biosynthesis
MCON_0086	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
MCON_0098	PWY-5941	glycogen degradation II (eukaryotic)
MCON_0098	PWY-622	starch biosynthesis
MCON_0098	PWY-6731	starch degradation III
MCON_0098	PWY-6737	starch degradation V
MCON_0098	PWY-7238	sucrose biosynthesis II
MCON_0125	PWY-6703	preQ<sub>0</sub> biosynthesis
MCON_0129	PWY-381	nitrate reduction II (assimilatory)
MCON_0129	PWY-5675	nitrate reduction V (assimilatory)
MCON_0129	PWY-6549	L-glutamine biosynthesis III
MCON_0129	PWY-6963	ammonia assimilation cycle I
MCON_0129	PWY-6964	ammonia assimilation cycle II
MCON_0144	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
MCON_0147	PWY-6349	CDP-archaeol biosynthesis
MCON_0157	PWY-1042	glycolysis IV (plant cytosol)
MCON_0157	PWY-1622	formaldehyde assimilation I (serine pathway)
MCON_0157	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
MCON_0157	PWY-5484	glycolysis II (from fructose 6-phosphate)
MCON_0157	PWY-5723	Rubisco shunt
MCON_0157	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
MCON_0157	PWY-6886	1-butanol autotrophic biosynthesis
MCON_0157	PWY-6901	superpathway of glucose and xylose degradation
MCON_0157	PWY-7003	glycerol degradation to butanol
MCON_0157	PWY-7124	ethylene biosynthesis V (engineered)
MCON_0157	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
MCON_0161	PWY-5506	methanol oxidation to formaldehyde IV
MCON_0166	PWY-6749	CMP-legionaminate biosynthesis I
MCON_0173	PWY-6167	flavin biosynthesis II (archaea)
MCON_0173	PWY-6168	flavin biosynthesis III (fungi)
MCON_0195	PWY-6643	coenzyme M biosynthesis II
MCON_0206	PWY-4361	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation
MCON_0206	PWY-5532	adenosine nucleotides degradation IV
MCON_0206	PWY-7174	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation II
MCON_0207	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
MCON_0207	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
MCON_0207	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
MCON_0208	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
MCON_0208	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
MCON_0208	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
MCON_0209	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
MCON_0209	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
MCON_0209	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
MCON_0222	PWY-6711	archaeosine biosynthesis
MCON_0223	PWY-1622	formaldehyde assimilation I (serine pathway)
MCON_0223	PWY-181	photorespiration
MCON_0223	PWY-2161	folate polyglutamylation
MCON_0223	PWY-2201	folate transformations I
MCON_0223	PWY-3661	glycine betaine degradation I
MCON_0223	PWY-3661-1	glycine betaine degradation II (mammalian)
MCON_0223	PWY-3841	folate transformations II
MCON_0223	PWY-5497	purine nucleobases degradation II (anaerobic)
MCON_0224	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
MCON_0224	PWY-2201	folate transformations I
MCON_0224	PWY-3841	folate transformations II
MCON_0224	PWY-5030	L-histidine degradation III
MCON_0224	PWY-5497	purine nucleobases degradation II (anaerobic)
MCON_0224	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
MCON_0229	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
MCON_0238	PWY-5209	methyl-coenzyme M oxidation to CO<sub>2</sub>
MCON_0240	PWY-5209	methyl-coenzyme M oxidation to CO<sub>2</sub>
MCON_0249	PWY-6823	molybdenum cofactor biosynthesis
MCON_0253	PWY-3341	L-proline biosynthesis III
MCON_0253	PWY-4981	L-proline biosynthesis II (from arginine)
MCON_0253	PWY-6344	L-ornithine degradation II (Stickland reaction)
MCON_0299	PWY-5381	pyridine nucleotide cycling (plants)
MCON_0299	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
MCON_0299	PWY-6596	adenosine nucleotides degradation I
MCON_0299	PWY-6606	guanosine nucleotides degradation II
MCON_0299	PWY-6607	guanosine nucleotides degradation I
MCON_0299	PWY-6608	guanosine nucleotides degradation III
MCON_0299	PWY-7185	UTP and CTP dephosphorylation I
MCON_0312	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
MCON_0316	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
MCON_0338	PWY-6700	queuosine biosynthesis
MCON_0339	PWY-6700	queuosine biosynthesis
MCON_0339	PWY-6711	archaeosine biosynthesis
MCON_0361	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
MCON_0363	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
MCON_0375	PWY-5451	acetone degradation I (to methylglyoxal)
MCON_0375	PWY-6588	pyruvate fermentation to acetone
MCON_0375	PWY-6876	isopropanol biosynthesis
MCON_0375	PWY-7466	acetone degradation III (to propane-1,2-diol)
MCON_0409	PWY-5101	L-isoleucine biosynthesis II
MCON_0409	PWY-6871	3-methylbutanol biosynthesis
MCON_0410	PWY-5101	L-isoleucine biosynthesis II
MCON_0410	PWY-5103	L-isoleucine biosynthesis III
MCON_0410	PWY-5104	L-isoleucine biosynthesis IV
MCON_0410	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
MCON_0410	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
MCON_0410	PWY-6389	(<i>S</i>)-acetoin biosynthesis
MCON_0410	PWY-7111	pyruvate fermentation to isobutanol (engineered)
MCON_0411	PWY-5101	L-isoleucine biosynthesis II
MCON_0411	PWY-5103	L-isoleucine biosynthesis III
MCON_0411	PWY-5104	L-isoleucine biosynthesis IV
MCON_0411	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
MCON_0411	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
MCON_0411	PWY-6389	(<i>S</i>)-acetoin biosynthesis
MCON_0411	PWY-7111	pyruvate fermentation to isobutanol (engineered)
MCON_0412	PWY-5101	L-isoleucine biosynthesis II
MCON_0412	PWY-5103	L-isoleucine biosynthesis III
MCON_0412	PWY-5104	L-isoleucine biosynthesis IV
MCON_0412	PWY-7111	pyruvate fermentation to isobutanol (engineered)
MCON_0417	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
MCON_0417	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
MCON_0429	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
MCON_0429	PWY-5686	UMP biosynthesis
MCON_0430	PWY-2941	L-lysine biosynthesis II
MCON_0430	PWY-5097	L-lysine biosynthesis VI
MCON_0442	PWY-6167	flavin biosynthesis II (archaea)
MCON_0459	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
MCON_0460	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
MCON_0460	PWY-6148	tetrahydromethanopterin biosynthesis
MCON_0460	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
MCON_0460	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
MCON_0461	PWY-5669	phosphatidylethanolamine biosynthesis I
MCON_0462	PWY-5669	phosphatidylethanolamine biosynthesis I
MCON_0492	PWY-6654	phosphopantothenate biosynthesis III
MCON_0501	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
MCON_0501	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
MCON_0509	PWY-6825	phosphatidylcholine biosynthesis V
MCON_0533	PWY-6703	preQ<sub>0</sub> biosynthesis
MCON_0554	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
MCON_0556	PWY-6672	<i>cis</i>-genanyl-CoA degradation
MCON_0556	PWY-7118	chitin degradation to ethanol
MCON_0558	PWY-6672	<i>cis</i>-genanyl-CoA degradation
MCON_0558	PWY-7118	chitin degradation to ethanol
MCON_0559	PWY-6672	<i>cis</i>-genanyl-CoA degradation
MCON_0559	PWY-7118	chitin degradation to ethanol
MCON_0561	PWY-6672	<i>cis</i>-genanyl-CoA degradation
MCON_0561	PWY-7118	chitin degradation to ethanol
MCON_0567	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
MCON_0567	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
MCON_0567	PWY-6269	adenosylcobalamin salvage from cobinamide II
MCON_0570	PWY-6308	L-cysteine biosynthesis II (tRNA-dependent)
MCON_0583	PWY-5532	adenosine nucleotides degradation IV
MCON_0660	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
MCON_0660	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
MCON_0667	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
MCON_0667	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
MCON_0668	PWY-6823	molybdenum cofactor biosynthesis
MCON_0684	PWY-6683	sulfate reduction III (assimilatory)
MCON_0725	PWY-6749	CMP-legionaminate biosynthesis I
MCON_0747	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
MCON_0803	PWY-2941	L-lysine biosynthesis II
MCON_0803	PWY-2942	L-lysine biosynthesis III
MCON_0803	PWY-5097	L-lysine biosynthesis VI
MCON_0804	PWY-2941	L-lysine biosynthesis II
MCON_0804	PWY-2942	L-lysine biosynthesis III
MCON_0804	PWY-5097	L-lysine biosynthesis VI
MCON_0806	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
MCON_0806	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
MCON_0806	PWY-6897	thiamin salvage II
MCON_0806	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
MCON_0806	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
MCON_0806	PWY-6910	hydroxymethylpyrimidine salvage
MCON_0806	PWY-7353	4-methyl-5(&beta;-hydroxyethyl)thiazole salvage (yeast)
MCON_0806	PWY-7356	thiamin salvage IV (yeast)
MCON_0806	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
MCON_0819	PWY-1341	phenylacetate degradation II (anaerobic)
MCON_0819	PWY-6318	L-phenylalanine degradation IV (mammalian, via side chain)
MCON_0895	PWY-5941	glycogen degradation II (eukaryotic)
MCON_0895	PWY-6724	starch degradation II
MCON_0895	PWY-6737	starch degradation V
MCON_0895	PWY-7238	sucrose biosynthesis II
MCON_0899	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
MCON_0900	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
MCON_0900	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
MCON_0901	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
MCON_0901	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
MCON_0901	PWY-5194	siroheme biosynthesis
MCON_0901	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
MCON_0910	PWY-6823	molybdenum cofactor biosynthesis
MCON_0918	PWY-5198	factor 420 biosynthesis
MCON_0919	PWY-5199	factor 420 polyglutamylation
MCON_0926	PWY-7206	pyrimidine deoxyribonucleotides dephosphorylation
MCON_1025	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
MCON_1025	PWY-5686	UMP biosynthesis
MCON_1025	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
MCON_1026	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
MCON_1026	PWY-5686	UMP biosynthesis
MCON_1026	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
MCON_1033	PWY-1723	formaldehyde oxidation V (H<sub>4</sub>MPT pathway)
MCON_1033	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
MCON_1034	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
MCON_1052	PWY-5198	factor 420 biosynthesis
MCON_1056	PWY-6349	CDP-archaeol biosynthesis
MCON_1058	PWY-5198	factor 420 biosynthesis
MCON_1062	PWY-5198	factor 420 biosynthesis
MCON_1081	PWY-4381	fatty acid biosynthesis initiation I
MCON_1112	PWY-1341	phenylacetate degradation II (anaerobic)
MCON_1112	PWY-6318	L-phenylalanine degradation IV (mammalian, via side chain)
MCON_1149	PWY-5101	L-isoleucine biosynthesis II
MCON_1149	PWY-5103	L-isoleucine biosynthesis III
MCON_1149	PWY-5104	L-isoleucine biosynthesis IV
MCON_1149	PWY-7111	pyruvate fermentation to isobutanol (engineered)
MCON_1155	PWY-6167	flavin biosynthesis II (archaea)
MCON_1155	PWY-6168	flavin biosynthesis III (fungi)
MCON_1155	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
MCON_1164	PWY-5316	nicotine biosynthesis
MCON_1164	PWY-5381	pyridine nucleotide cycling (plants)
MCON_1164	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
MCON_1164	PWY-7342	superpathway of nicotine biosynthesis
MCON_1170	PWY-6890	4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis
MCON_1172	PWY-6683	sulfate reduction III (assimilatory)
MCON_1192	PWY-5686	UMP biosynthesis
MCON_1199	PWY-6409	pyoverdine I biosynthesis
MCON_1199	PWY-6562	norspermidine biosynthesis
MCON_1199	PWY-761	rhizobactin 1021 biosynthesis
MCON_1206	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
MCON_1206	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
MCON_1206	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
MCON_1206	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
MCON_1211	PWY-2941	L-lysine biosynthesis II
MCON_1211	PWY-2942	L-lysine biosynthesis III
MCON_1211	PWY-5097	L-lysine biosynthesis VI
MCON_1211	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
MCON_1211	PWY-6559	spermidine biosynthesis II
MCON_1211	PWY-6562	norspermidine biosynthesis
MCON_1211	PWY-7153	grixazone biosynthesis
MCON_1211	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
MCON_1212	PWY-6823	molybdenum cofactor biosynthesis
MCON_1225	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
MCON_1225	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
MCON_1225	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
MCON_1225	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
MCON_1239	PWY-6160	3-dehydroquinate biosynthesis II (archaea)
MCON_1240	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
MCON_1240	PWY-6416	quinate degradation II
MCON_1240	PWY-6707	gallate biosynthesis
MCON_1251	PWY-6610	adenine and adenosine salvage IV
MCON_1268	PWY-7234	inosine-5'-phosphate biosynthesis III
MCON_1299	PWY-5958	acridone alkaloid biosynthesis
MCON_1299	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
MCON_1299	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
MCON_1300	PWY-5958	acridone alkaloid biosynthesis
MCON_1300	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
MCON_1300	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
MCON_1332	PWY-5372	carbon tetrachloride degradation II
MCON_1332	PWY-6780	hydrogen production VI
MCON_1365	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
MCON_1365	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
MCON_1365	PWY-7185	UTP and CTP dephosphorylation I
MCON_1365	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
MCON_1365	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
MCON_1368	PWY-6123	inosine-5'-phosphate biosynthesis I
MCON_1368	PWY-6124	inosine-5'-phosphate biosynthesis II
MCON_1368	PWY-7234	inosine-5'-phosphate biosynthesis III
MCON_1370	PWY-6829	tRNA methylation (yeast)
MCON_1383	PWY-1723	formaldehyde oxidation V (H<sub>4</sub>MPT pathway)
MCON_1383	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
MCON_1383	PWY-5686	UMP biosynthesis
MCON_1404	PWY-1622	formaldehyde assimilation I (serine pathway)
MCON_1404	PWY-5484	glycolysis II (from fructose 6-phosphate)
MCON_1407	PWY-5651	L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
MCON_1407	PWY-6309	L-tryptophan degradation XI (mammalian, via kynurenine)
MCON_1441	PWY-6123	inosine-5'-phosphate biosynthesis I
MCON_1441	PWY-6124	inosine-5'-phosphate biosynthesis II
MCON_1441	PWY-7234	inosine-5'-phosphate biosynthesis III
MCON_1443	PWY-6167	flavin biosynthesis II (archaea)
MCON_1449	PWY-6482	diphthamide biosynthesis (archaea)
MCON_1451	PWY-1042	glycolysis IV (plant cytosol)
MCON_1451	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
MCON_1451	PWY-5484	glycolysis II (from fructose 6-phosphate)
MCON_1451	PWY-5723	Rubisco shunt
MCON_1451	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
MCON_1451	PWY-6886	1-butanol autotrophic biosynthesis
MCON_1451	PWY-6901	superpathway of glucose and xylose degradation
MCON_1451	PWY-7003	glycerol degradation to butanol
MCON_1451	PWY-7124	ethylene biosynthesis V (engineered)
MCON_1451	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
MCON_1453	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
MCON_1453	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
MCON_1455	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
MCON_1456	PWY-4983	L-citrulline-nitric oxide cycle
MCON_1456	PWY-4984	urea cycle
MCON_1456	PWY-5	canavanine biosynthesis
MCON_1456	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
MCON_1456	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
MCON_1471	PWY-6123	inosine-5'-phosphate biosynthesis I
MCON_1471	PWY-6124	inosine-5'-phosphate biosynthesis II
MCON_1471	PWY-7234	inosine-5'-phosphate biosynthesis III
MCON_1478	PWY-6160	3-dehydroquinate biosynthesis II (archaea)
MCON_1484	PWY-6317	galactose degradation I (Leloir pathway)
MCON_1484	PWY-6527	stachyose degradation
MCON_1486	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
MCON_1491	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
MCON_1491	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
MCON_1493	PWY-6167	flavin biosynthesis II (archaea)
MCON_1493	PWY-6168	flavin biosynthesis III (fungi)
MCON_1501	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
MCON_1501	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
MCON_1502	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
MCON_1503	PWY-5194	siroheme biosynthesis
MCON_1503	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
MCON_1507	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
MCON_1509	PWY-6823	molybdenum cofactor biosynthesis
MCON_1530	PWY-6938	NADH repair
MCON_1542	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
MCON_1542	PWY-7177	UTP and CTP dephosphorylation II
MCON_1542	PWY-7185	UTP and CTP dephosphorylation I
MCON_1574	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
MCON_1574	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
MCON_1574	PWY-6896	thiamin salvage I
MCON_1574	PWY-6897	thiamin salvage II
MCON_1611	PWY-6890	4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis
MCON_1615	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
MCON_1631	PWY-6167	flavin biosynthesis II (archaea)
MCON_1631	PWY-6168	flavin biosynthesis III (fungi)
MCON_1637	PWY-3841	folate transformations II
MCON_1637	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
MCON_1637	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
MCON_1637	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
MCON_1637	PWY-7199	pyrimidine deoxyribonucleosides salvage
MCON_1637	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
MCON_1651	PWY-2941	L-lysine biosynthesis II
MCON_1651	PWY-2942	L-lysine biosynthesis III
MCON_1651	PWY-5097	L-lysine biosynthesis VI
MCON_1651	PWY-6559	spermidine biosynthesis II
MCON_1651	PWY-6562	norspermidine biosynthesis
MCON_1651	PWY-7153	grixazone biosynthesis
MCON_1652	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
MCON_1652	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
MCON_1652	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
MCON_1654	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
MCON_1654	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
MCON_1654	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
MCON_1654	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
MCON_1654	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
MCON_1654	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
MCON_1654	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
MCON_1654	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
MCON_1679	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
MCON_1682	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
MCON_1683	PWY-5194	siroheme biosynthesis
MCON_1683	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
MCON_1703	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
MCON_1703	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
MCON_1703	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
MCON_1703	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
MCON_1703	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
MCON_1703	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
MCON_1703	PWY-7205	CMP phosphorylation
MCON_1703	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
MCON_1703	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
MCON_1703	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
MCON_1703	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
MCON_1703	PWY-7224	purine deoxyribonucleosides salvage
MCON_1703	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
MCON_1703	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
MCON_1712	PWY-5392	reductive TCA cycle II
MCON_1712	PWY-5537	pyruvate fermentation to acetate V
MCON_1712	PWY-5538	pyruvate fermentation to acetate VI
MCON_1712	PWY-5690	TCA cycle II (plants and fungi)
MCON_1712	PWY-5913	TCA cycle VI (obligate autotrophs)
MCON_1712	PWY-6728	methylaspartate cycle
MCON_1712	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
MCON_1712	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
MCON_1723	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
MCON_1723	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
MCON_1723	PWY-6269	adenosylcobalamin salvage from cobinamide II
MCON_1733	PWY-5209	methyl-coenzyme M oxidation to CO<sub>2</sub>
MCON_1735	PWY-4981	L-proline biosynthesis II (from arginine)
MCON_1735	PWY-4984	urea cycle
MCON_1735	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
MCON_1770	PWY-2941	L-lysine biosynthesis II
MCON_1770	PWY-2942	L-lysine biosynthesis III
MCON_1770	PWY-5097	L-lysine biosynthesis VI
MCON_1797	PWY-6825	phosphatidylcholine biosynthesis V
MCON_1826	PWY-7456	mannan degradation
MCON_1830	PWY-7346	UDP-&alpha;-D-glucuronate biosynthesis (from UDP-glucose)
MCON_1872	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
MCON_1872	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
MCON_1872	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
MCON_1873	PWY-381	nitrate reduction II (assimilatory)
MCON_1873	PWY-5675	nitrate reduction V (assimilatory)
MCON_1873	PWY-6549	L-glutamine biosynthesis III
MCON_1873	PWY-6963	ammonia assimilation cycle I
MCON_1873	PWY-6964	ammonia assimilation cycle II
MCON_1878	PWY-7285	methylwyosine biosynthesis
MCON_1878	PWY-7286	7-(3-amino-3-carboxypropyl)-wyosine biosynthesis
MCON_1892	PWY-6829	tRNA methylation (yeast)
MCON_1892	PWY-7285	methylwyosine biosynthesis
MCON_1892	PWY-7286	7-(3-amino-3-carboxypropyl)-wyosine biosynthesis
MCON_1902	PWY-5723	Rubisco shunt
MCON_1902	PWY-7193	pyrimidine ribonucleosides salvage I
MCON_1907	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
MCON_1907	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
MCON_1907	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
MCON_1907	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
MCON_1907	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
MCON_1907	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
MCON_1908	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
MCON_1908	PWY-6148	tetrahydromethanopterin biosynthesis
MCON_1908	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
MCON_1908	PWY-6898	thiamin salvage III
MCON_1908	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
MCON_1908	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
MCON_1908	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
MCON_1916	PWY-6349	CDP-archaeol biosynthesis
MCON_1928	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
MCON_1934	PWY-6654	phosphopantothenate biosynthesis III
MCON_1939	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
MCON_1939	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
MCON_1948	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
MCON_1950	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
MCON_1953	PWY-5686	UMP biosynthesis
MCON_1956	PWY-6829	tRNA methylation (yeast)
MCON_1956	PWY-7285	methylwyosine biosynthesis
MCON_1956	PWY-7286	7-(3-amino-3-carboxypropyl)-wyosine biosynthesis
MCON_1964	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
MCON_2025	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
MCON_2025	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
MCON_2072	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
MCON_2072	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
MCON_2072	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
MCON_2076	PWY-6825	phosphatidylcholine biosynthesis V
MCON_2089	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
MCON_2095	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
MCON_2095	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
MCON_2095	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
MCON_2225	PWY-6482	diphthamide biosynthesis (archaea)
MCON_2225	PWY-7546	diphthamide biosynthesis (eukaryotes)
MCON_2237	PWY-1881	formate oxidation to CO<sub>2</sub>
MCON_2237	PWY-5497	purine nucleobases degradation II (anaerobic)
MCON_2237	PWY-6696	oxalate degradation III
MCON_2280	PWY-6840	homoglutathione biosynthesis
MCON_2280	PWY-7255	ergothioneine biosynthesis I (bacteria)
MCON_2293	PWY-5057	L-valine degradation II
MCON_2293	PWY-5076	L-leucine degradation III
MCON_2293	PWY-5078	L-isoleucine degradation II
MCON_2293	PWY-5101	L-isoleucine biosynthesis II
MCON_2293	PWY-5103	L-isoleucine biosynthesis III
MCON_2293	PWY-5104	L-isoleucine biosynthesis IV
MCON_2293	PWY-5108	L-isoleucine biosynthesis V
MCON_2295	PWY-6167	flavin biosynthesis II (archaea)
MCON_2295	PWY-6168	flavin biosynthesis III (fungi)
MCON_2332	PWY-1341	phenylacetate degradation II (anaerobic)
MCON_2332	PWY-6318	L-phenylalanine degradation IV (mammalian, via side chain)
MCON_2339	PWY-5491	diethylphosphate degradation
MCON_2355	PWY-1042	glycolysis IV (plant cytosol)
MCON_2355	PWY-5484	glycolysis II (from fructose 6-phosphate)
MCON_2355	PWY-6886	1-butanol autotrophic biosynthesis
MCON_2355	PWY-6901	superpathway of glucose and xylose degradation
MCON_2355	PWY-7003	glycerol degradation to butanol
MCON_2372	PWY-6148	tetrahydromethanopterin biosynthesis
MCON_2389	PWY-5207	coenzyme B/coenzyme M regeneration
MCON_2418	PWY-5097	L-lysine biosynthesis VI
MCON_2449	PWY-6823	molybdenum cofactor biosynthesis
MCON_2465	PWY-5686	UMP biosynthesis
MCON_2483	PWY-6871	3-methylbutanol biosynthesis
MCON_2508	PWY-6832	2-aminoethylphosphonate degradation II
MCON_2512	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
MCON_2512	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
MCON_2512	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
MCON_2515	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
MCON_2516	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
MCON_2525	PWY-5484	glycolysis II (from fructose 6-phosphate)
MCON_2557	PWY-5123	<i>trans, trans</i>-farnesyl diphosphate biosynthesis
MCON_2557	PWY-6174	mevalonate pathway II (archaea)
MCON_2557	PWY-6383	mono-<i>trans</i>, poly-<i>cis</i> decaprenyl phosphate biosynthesis
MCON_2557	PWY-6859	<i>all-trans</i>-farnesol biosynthesis
MCON_2557	PWY-7102	bisabolene biosynthesis
MCON_2557	PWY-7391	isoprene biosynthesis II (engineered)
MCON_2557	PWY-7524	mevalonate pathway III (archaea)
MCON_2557	PWY-7560	methylerythritol phosphate pathway II
MCON_2557	PWY-922	mevalonate pathway I
MCON_2558	PWY-6174	mevalonate pathway II (archaea)
MCON_2558	PWY-7524	mevalonate pathway III (archaea)
MCON_2559	PWY-3821	galactose degradation III
MCON_2559	PWY-6174	mevalonate pathway II (archaea)
MCON_2559	PWY-6317	galactose degradation I (Leloir pathway)
MCON_2559	PWY-6527	stachyose degradation
MCON_2559	PWY-7391	isoprene biosynthesis II (engineered)
MCON_2559	PWY-922	mevalonate pathway I
MCON_2572	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
MCON_2577	PWY-7335	UDP-<i>N</i>-acetyl-&alpha;-D-mannosaminouronate biosynthesis
MCON_2582	PWY-6749	CMP-legionaminate biosynthesis I
MCON_2583	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
MCON_2593	PWY-3221	dTDP-L-rhamnose biosynthesis II
MCON_2593	PWY-6808	dTDP-D-forosamine biosynthesis
MCON_2593	PWY-6942	dTDP-D-desosamine biosynthesis
MCON_2593	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
MCON_2593	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
MCON_2593	PWY-6974	dTDP-L-olivose biosynthesis
MCON_2593	PWY-6976	dTDP-L-mycarose biosynthesis
MCON_2593	PWY-7104	dTDP-L-megosamine biosynthesis
MCON_2593	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
MCON_2593	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
MCON_2593	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
MCON_2593	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
MCON_2593	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
MCON_2593	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
MCON_2593	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
MCON_2593	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
MCON_2596	PWY-6871	3-methylbutanol biosynthesis
MCON_2598	PWY-6482	diphthamide biosynthesis (archaea)
MCON_2598	PWY-7546	diphthamide biosynthesis (eukaryotes)
MCON_2612	PWY-6854	ethylene biosynthesis III (microbes)
MCON_2631	PWY-5686	UMP biosynthesis
MCON_2639	PWY-7432	L-phenylalanine biosynthesis III (cytosolic, plants)
MCON_2640	PWY-6174	mevalonate pathway II (archaea)
MCON_2640	PWY-7391	isoprene biosynthesis II (engineered)
MCON_2640	PWY-7524	mevalonate pathway III (archaea)
MCON_2640	PWY-922	mevalonate pathway I
MCON_2643	PWY-6123	inosine-5'-phosphate biosynthesis I
MCON_2643	PWY-7234	inosine-5'-phosphate biosynthesis III
MCON_2644	PWY-3461	L-tyrosine biosynthesis II
MCON_2644	PWY-3462	L-phenylalanine biosynthesis II
MCON_2644	PWY-6120	L-tyrosine biosynthesis III
MCON_2644	PWY-6627	salinosporamide A biosynthesis
MCON_2645	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
MCON_2654	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
MCON_2654	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
MCON_2663	PWY-6700	queuosine biosynthesis
MCON_2669	PWY-6123	inosine-5'-phosphate biosynthesis I
MCON_2669	PWY-6124	inosine-5'-phosphate biosynthesis II
MCON_2669	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
MCON_2669	PWY-7234	inosine-5'-phosphate biosynthesis III
MCON_2678	PWY-7205	CMP phosphorylation
MCON_2722	PWY-1042	glycolysis IV (plant cytosol)
MCON_2722	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
MCON_2722	PWY-5484	glycolysis II (from fructose 6-phosphate)
MCON_2722	PWY-5723	Rubisco shunt
MCON_2722	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
MCON_2722	PWY-6886	1-butanol autotrophic biosynthesis
MCON_2722	PWY-6901	superpathway of glucose and xylose degradation
MCON_2722	PWY-7003	glycerol degradation to butanol
MCON_2722	PWY-7124	ethylene biosynthesis V (engineered)
MCON_2722	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
MCON_2724	PWY-6823	molybdenum cofactor biosynthesis
MCON_2737	PWY-101	photosynthesis light reactions
MCON_2737	PWY-7230	ubiquinol-6 biosynthesis from 4-aminobenzoate (eukaryotic)
MCON_2769	PWY-5316	nicotine biosynthesis
MCON_2769	PWY-7342	superpathway of nicotine biosynthesis
MCON_2819	PWY-6637	sulfolactate degradation II
MCON_2819	PWY-6643	coenzyme M biosynthesis II
MCON_2824	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
MCON_2824	PWY-5912	2'-deoxymugineic acid phytosiderophore biosynthesis
MCON_2865	PWY-5372	carbon tetrachloride degradation II
MCON_2865	PWY-6780	hydrogen production VI
MCON_2868	PWY-6672	<i>cis</i>-genanyl-CoA degradation
MCON_2868	PWY-7118	chitin degradation to ethanol
MCON_2876	PWY-5941	glycogen degradation II (eukaryotic)
MCON_2876	PWY-622	starch biosynthesis
MCON_2876	PWY-6731	starch degradation III
MCON_2876	PWY-6737	starch degradation V
MCON_2876	PWY-7238	sucrose biosynthesis II
MCON_2882	PWY-3581	(<i>S</i>)-reticuline biosynthesis I
MCON_2882	PWY-5254	methanofuran biosynthesis
MCON_2882	PWY-5474	hydroxycinnamic acid tyramine amides biosynthesis
MCON_2882	PWY-6133	(S)-reticuline biosynthesis II
MCON_2882	PWY-6802	salidroside biosynthesis
MCON_2882	PWY-7297	octopamine biosynthesis
MCON_2883	PWY-5484	glycolysis II (from fructose 6-phosphate)
MCON_2884	PWY-6823	molybdenum cofactor biosynthesis
MCON_2896	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
MCON_2907	PWY-6689	tRNA splicing
MCON_2909	PWY-5340	sulfate activation for sulfonation
MCON_2922	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
MCON_2938	PWY-1042	glycolysis IV (plant cytosol)
MCON_2938	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
MCON_2938	PWY-5484	glycolysis II (from fructose 6-phosphate)
MCON_2938	PWY-5723	Rubisco shunt
MCON_2938	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
MCON_2938	PWY-6886	1-butanol autotrophic biosynthesis
MCON_2938	PWY-6901	superpathway of glucose and xylose degradation
MCON_2938	PWY-7003	glycerol degradation to butanol
MCON_2938	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
MCON_2938	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
MCON_2977	PWY-3801	sucrose degradation II (sucrose synthase)
MCON_2977	PWY-5054	sorbitol biosynthesis I
MCON_2977	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
MCON_2977	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
MCON_2977	PWY-5659	GDP-mannose biosynthesis
MCON_2977	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
MCON_2977	PWY-621	sucrose degradation III (sucrose invertase)
MCON_2977	PWY-622	starch biosynthesis
MCON_2977	PWY-6531	mannitol cycle
MCON_2977	PWY-6981	chitin biosynthesis
MCON_2977	PWY-7238	sucrose biosynthesis II
MCON_2977	PWY-7347	sucrose biosynthesis III
MCON_2977	PWY-7385	1,3-propanediol biosynthesis (engineered)
MCON_3017	PWY-4202	arsenate detoxification I (glutaredoxin)
MCON_3017	PWY-5839	menaquinol-7 biosynthesis
MCON_3017	PWY-5844	menaquinol-9 biosynthesis
MCON_3017	PWY-5849	menaquinol-6 biosynthesis
MCON_3017	PWY-5890	menaquinol-10 biosynthesis
MCON_3017	PWY-5891	menaquinol-11 biosynthesis
MCON_3017	PWY-5892	menaquinol-12 biosynthesis
MCON_3017	PWY-5895	menaquinol-13 biosynthesis
MCON_3046	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
MCON_3046	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
MCON_3086	PWY-5532	adenosine nucleotides degradation IV
MCON_3086	PWY-5723	Rubisco shunt
MCON_3109	PWY-4202	arsenate detoxification I (glutaredoxin)
MCON_3135	PWY-6308	L-cysteine biosynthesis II (tRNA-dependent)
MCON_3136	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
MCON_3136	PWY-5723	Rubisco shunt
MCON_3141	PWY-181	photorespiration
MCON_3166	PWY-40	putrescine biosynthesis I
MCON_3166	PWY-43	putrescine biosynthesis II
MCON_3166	PWY-6305	putrescine biosynthesis IV
MCON_3166	PWY-6834	spermidine biosynthesis III
MCON_3190	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
MCON_3190	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
MCON_3190	PWY-6896	thiamin salvage I
MCON_3190	PWY-6897	thiamin salvage II
MCON_3207	PWY-7234	inosine-5'-phosphate biosynthesis III
MCON_3229	PWY-5532	adenosine nucleotides degradation IV
MCON_3231	PWY-5350	thiosulfate disproportionation III (rhodanese)
MCON_3232	PWY-6160	3-dehydroquinate biosynthesis II (archaea)
MCON_3277	PWY-1881	formate oxidation to CO<sub>2</sub>
MCON_3277	PWY-5497	purine nucleobases degradation II (anaerobic)
MCON_3277	PWY-6696	oxalate degradation III
MCON_3293	PWY-1042	glycolysis IV (plant cytosol)
MCON_3293	PWY-5484	glycolysis II (from fructose 6-phosphate)
MCON_3293	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
MCON_3293	PWY-7003	glycerol degradation to butanol
MCON_3296	PWY-6349	CDP-archaeol biosynthesis
MCON_3307	PWY-7303	3-dimethylallyl-4-hydroxybenzoate biosynthesis
MCON_3308	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
MCON_3313	PWY-5663	tetrahydrobiopterin biosynthesis I
MCON_3313	PWY-5664	tetrahydrobiopterin biosynthesis II
MCON_3313	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
MCON_3313	PWY-6703	preQ<sub>0</sub> biosynthesis
MCON_3313	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
MCON_3313	PWY-6983	tetrahydrobiopterin biosynthesis III
MCON_3313	PWY-7442	drosopterin and aurodrosopterin biosynthesis
MCON_3321	PWY-6160	3-dehydroquinate biosynthesis II (archaea)
MCON_3335	PWY-5198	factor 420 biosynthesis
MCON_3352	PWY-4983	L-citrulline-nitric oxide cycle
MCON_3352	PWY-4984	urea cycle
MCON_3352	PWY-5	canavanine biosynthesis
MCON_3352	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
MCON_3352	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
MCON_3359	PWY-6174	mevalonate pathway II (archaea)
MCON_3359	PWY-7391	isoprene biosynthesis II (engineered)
MCON_3359	PWY-7524	mevalonate pathway III (archaea)
MCON_3359	PWY-922	mevalonate pathway I
MCON_3369	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
MCON_3369	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
MCON_3369	PWY-6897	thiamin salvage II
MCON_3369	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
MCON_3369	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
MCON_3369	PWY-7353	4-methyl-5(&beta;-hydroxyethyl)thiazole salvage (yeast)
MCON_3369	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
MCON_3370	PWY-6897	thiamin salvage II
MCON_3370	PWY-7353	4-methyl-5(&beta;-hydroxyethyl)thiazole salvage (yeast)
MCON_3370	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
MCON_3424	PWY-6482	diphthamide biosynthesis (archaea)
MCON_3424	PWY-7546	diphthamide biosynthesis (eukaryotes)
MCON_3425	PWY-6829	tRNA methylation (yeast)
MCON_3425	PWY-7285	methylwyosine biosynthesis
MCON_3425	PWY-7286	7-(3-amino-3-carboxypropyl)-wyosine biosynthesis
MCON_3443	PWY-5199	factor 420 polyglutamylation
MCON_3443	PWY-6556	pyrimidine ribonucleosides salvage II
MCON_3443	PWY-7181	pyrimidine deoxyribonucleosides degradation
MCON_3443	PWY-7193	pyrimidine ribonucleosides salvage I
MCON_3443	PWY-7199	pyrimidine deoxyribonucleosides salvage
MCON_3444	PWY-6614	tetrahydrofolate biosynthesis
MCON_3455	PWY-43	putrescine biosynthesis II
MCON_3460	PWY-6823	molybdenum cofactor biosynthesis
MCON_3460	PWY-6891	thiazole biosynthesis II (Bacillus)
MCON_3460	PWY-6892	thiazole biosynthesis I (E. coli)
MCON_3460	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
MCON_3474	PWY-4361	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation
MCON_3474	PWY-7174	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation II
MCON_3479	PWY-6654	phosphopantothenate biosynthesis III
MCON_3521	PWY-6823	molybdenum cofactor biosynthesis
