JTY_0013	PWY-5958	acridone alkaloid biosynthesis
JTY_0013	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
JTY_0013	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
JTY_0021	PWY-723	alkylnitronates degradation
JTY_0047	PWY-2301	<i>myo</i>-inositol biosynthesis
JTY_0047	PWY-4661	1D-<i>myo</i>-inositol hexakisphosphate biosynthesis III (<i>Spirodela polyrrhiza</i>)
JTY_0047	PWY-6372	1D-<i>myo</i>-inositol hexakisphosphate biosynthesis IV (<i>Dictyostelium</i>)
JTY_0047	PWY-6580	phosphatidylinositol biosynthesis I (bacteria)
JTY_0047	PWY-6664	di-myo-inositol phosphate biosynthesis
JTY_0064	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
JTY_0064	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
JTY_0068	PWY-5913	TCA cycle VI (obligate autotrophs)
JTY_0068	PWY-6549	L-glutamine biosynthesis III
JTY_0068	PWY-6728	methylaspartate cycle
JTY_0068	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
JTY_0068	PWY-7124	ethylene biosynthesis V (engineered)
JTY_0068	PWY-7254	TCA cycle VII (acetate-producers)
JTY_0068	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
JTY_0072	PWY-1622	formaldehyde assimilation I (serine pathway)
JTY_0072	PWY-181	photorespiration
JTY_0072	PWY-2161	folate polyglutamylation
JTY_0072	PWY-2201	folate transformations I
JTY_0072	PWY-3661	glycine betaine degradation I
JTY_0072	PWY-3661-1	glycine betaine degradation II (mammalian)
JTY_0072	PWY-3841	folate transformations II
JTY_0072	PWY-5497	purine nucleobases degradation II (anaerobic)
JTY_0117	PWY-6478	GDP-D-<i>glycero</i>-&alpha;-D-<i>manno</i>-heptose biosynthesis
JTY_0119	PWY-6478	GDP-D-<i>glycero</i>-&alpha;-D-<i>manno</i>-heptose biosynthesis
JTY_0122	PWY-6695	oxalate degradation II
JTY_0122	PWY-6696	oxalate degradation III
JTY_0125	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
JTY_0125	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
JTY_0130	PWY-2622	trehalose biosynthesis IV
JTY_0167	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
JTY_0167	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
JTY_0195	PWY-5101	L-isoleucine biosynthesis II
JTY_0195	PWY-5103	L-isoleucine biosynthesis III
JTY_0195	PWY-5104	L-isoleucine biosynthesis IV
JTY_0195	PWY-7111	pyruvate fermentation to isobutanol (engineered)
JTY_0217	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
JTY_0222	PWY-5741	ethylmalonyl-CoA pathway
JTY_0222	PWY-5744	glyoxylate assimilation
JTY_0222	PWY-6728	methylaspartate cycle
JTY_0239	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
JTY_0239	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
JTY_0239	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
JTY_0239	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
JTY_0239	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
JTY_0239	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
JTY_0239	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
JTY_0239	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
JTY_0242	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
JTY_0254	PWY-3781	aerobic respiration I (cytochrome c)
JTY_0254	PWY-4302	aerobic respiration III (alternative oxidase pathway)
JTY_0254	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
JTY_0254	PWY-5690	TCA cycle II (plants and fungi)
JTY_0254	PWY-6728	methylaspartate cycle
JTY_0254	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
JTY_0254	PWY-7254	TCA cycle VII (acetate-producers)
JTY_0254	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
JTY_0259	PWY-6683	sulfate reduction III (assimilatory)
JTY_0261	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
JTY_0261	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
JTY_0261	PWY-6269	adenosylcobalamin salvage from cobinamide II
JTY_0266	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
JTY_0267	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
JTY_0267	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
JTY_0316	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
JTY_0316	PWY-5523	5,6-dimethylbenzimidazole biosynthesis
JTY_0326	PWY-6185	4-methylcatechol degradation (<i>ortho</i> cleavage)
JTY_0331	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
JTY_0332	PWY-7346	UDP-&alpha;-D-glucuronate biosynthesis (from UDP-glucose)
JTY_0334	PWY-5350	thiosulfate disproportionation III (rhodanese)
JTY_0343	PWY-3221	dTDP-L-rhamnose biosynthesis II
JTY_0343	PWY-6808	dTDP-D-forosamine biosynthesis
JTY_0343	PWY-6942	dTDP-D-desosamine biosynthesis
JTY_0343	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
JTY_0343	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
JTY_0343	PWY-6974	dTDP-L-olivose biosynthesis
JTY_0343	PWY-6976	dTDP-L-mycarose biosynthesis
JTY_0343	PWY-7104	dTDP-L-megosamine biosynthesis
JTY_0343	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
JTY_0343	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
JTY_0343	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
JTY_0343	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
JTY_0343	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
JTY_0343	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
JTY_0343	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
JTY_0343	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
JTY_0365	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
JTY_0371	PWY-1042	glycolysis IV (plant cytosol)
JTY_0371	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
JTY_0371	PWY-5484	glycolysis II (from fructose 6-phosphate)
JTY_0371	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
JTY_0371	PWY-7385	1,3-propanediol biosynthesis (engineered)
JTY_0381	PWY-5372	carbon tetrachloride degradation II
JTY_0381	PWY-6780	hydrogen production VI
JTY_0390	PWY-5686	UMP biosynthesis
JTY_0417	PWY-1281	sulfoacetaldehyde degradation I
JTY_0417	PWY-5482	pyruvate fermentation to acetate II
JTY_0417	PWY-5485	pyruvate fermentation to acetate IV
JTY_0417	PWY-5497	purine nucleobases degradation II (anaerobic)
JTY_0417	PWY-6637	sulfolactate degradation II
JTY_0418	PWY-5482	pyruvate fermentation to acetate II
JTY_0418	PWY-5485	pyruvate fermentation to acetate IV
JTY_0418	PWY-5497	purine nucleobases degradation II (anaerobic)
JTY_0423	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
JTY_0423	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
JTY_0423	PWY-6897	thiamin salvage II
JTY_0423	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
JTY_0423	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
JTY_0423	PWY-7353	4-methyl-5(&beta;-hydroxyethyl)thiazole salvage (yeast)
JTY_0423	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
JTY_0426	PWY-6891	thiazole biosynthesis II (Bacillus)
JTY_0426	PWY-6892	thiazole biosynthesis I (E. coli)
JTY_0431	PWY-6910	hydroxymethylpyrimidine salvage
JTY_0431	PWY-7356	thiamin salvage IV (yeast)
JTY_0431	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
JTY_0432	PWY-6890	4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis
JTY_0441	PWY-6854	ethylene biosynthesis III (microbes)
JTY_0442	PWY-6840	homoglutathione biosynthesis
JTY_0442	PWY-7255	ergothioneine biosynthesis I (bacteria)
JTY_0445	PWY-5669	phosphatidylethanolamine biosynthesis I
JTY_0446	PWY-5669	phosphatidylethanolamine biosynthesis I
JTY_0447	PWY-6823	molybdenum cofactor biosynthesis
JTY_0472	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
JTY_0472	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
JTY_0477	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
JTY_0478	PWY-1361	benzoyl-CoA degradation I (aerobic)
JTY_0478	PWY-5109	2-methylbutanoate biosynthesis
JTY_0478	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
JTY_0478	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
JTY_0478	PWY-5177	glutaryl-CoA degradation
JTY_0478	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
JTY_0478	PWY-6435	4-hydroxybenzoate biosynthesis V
JTY_0478	PWY-6583	pyruvate fermentation to butanol I
JTY_0478	PWY-6863	pyruvate fermentation to hexanol
JTY_0478	PWY-6883	pyruvate fermentation to butanol II
JTY_0478	PWY-6944	androstenedione degradation
JTY_0478	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
JTY_0478	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
JTY_0478	PWY-7007	methyl ketone biosynthesis
JTY_0478	PWY-7046	4-coumarate degradation (anaerobic)
JTY_0478	PWY-7094	fatty acid salvage
JTY_0478	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
JTY_0478	PWY-735	jasmonic acid biosynthesis
JTY_0478	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
JTY_0489	PWY-7180	2'-deoxy-&alpha;-D-ribose 1-phosphate degradation
JTY_0493	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
JTY_0493	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
JTY_0500	PWY-1622	formaldehyde assimilation I (serine pathway)
JTY_0500	PWY-5484	glycolysis II (from fructose 6-phosphate)
JTY_0512	PWY-3341	L-proline biosynthesis III
JTY_0512	PWY-4981	L-proline biosynthesis II (from arginine)
JTY_0512	PWY-6344	L-ornithine degradation II (Stickland reaction)
JTY_0522	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
JTY_0523	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
JTY_0523	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
JTY_0524	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
JTY_0524	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
JTY_0525	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
JTY_0525	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
JTY_0537	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
JTY_0547	PWY-4381	fatty acid biosynthesis initiation I
JTY_0548	PWY-5839	menaquinol-7 biosynthesis
JTY_0548	PWY-5851	demethylmenaquinol-9 biosynthesis
JTY_0548	PWY-5852	demethylmenaquinol-8 biosynthesis I
JTY_0548	PWY-5853	demethylmenaquinol-6 biosynthesis I
JTY_0548	PWY-5890	menaquinol-10 biosynthesis
JTY_0548	PWY-5891	menaquinol-11 biosynthesis
JTY_0548	PWY-5892	menaquinol-12 biosynthesis
JTY_0548	PWY-5895	menaquinol-13 biosynthesis
JTY_0562	PWY-5791	1,4-dihydroxy-2-naphthoate biosynthesis II (plants)
JTY_0562	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
JTY_0568	PWY-5791	1,4-dihydroxy-2-naphthoate biosynthesis II (plants)
JTY_0568	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
JTY_0570	PWY-5791	1,4-dihydroxy-2-naphthoate biosynthesis II (plants)
JTY_0570	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
JTY_0573	PWY-5839	menaquinol-7 biosynthesis
JTY_0573	PWY-5844	menaquinol-9 biosynthesis
JTY_0573	PWY-5849	menaquinol-6 biosynthesis
JTY_0573	PWY-5890	menaquinol-10 biosynthesis
JTY_0573	PWY-5891	menaquinol-11 biosynthesis
JTY_0573	PWY-5892	menaquinol-12 biosynthesis
JTY_0573	PWY-5895	menaquinol-13 biosynthesis
JTY_0579	PWY-5667	CDP-diacylglycerol biosynthesis I
JTY_0579	PWY-5981	CDP-diacylglycerol biosynthesis III
JTY_0585	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
JTY_0585	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
JTY_0585	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
JTY_0585	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
JTY_0585	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
JTY_0585	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
JTY_0585	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
JTY_0585	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
JTY_0588	PWY-5381	pyridine nucleotide cycling (plants)
JTY_0635	PWY-6317	galactose degradation I (Leloir pathway)
JTY_0635	PWY-6527	stachyose degradation
JTY_0636	PWY-3821	galactose degradation III
JTY_0636	PWY-6317	galactose degradation I (Leloir pathway)
JTY_0636	PWY-6527	stachyose degradation
JTY_0688	PWY-6483	ceramide degradation
JTY_0688	PWY-7119	sphingolipid recycling and degradation (yeast)
JTY_0714	PWY-6167	flavin biosynthesis II (archaea)
JTY_0753	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
JTY_0774	PWY-5642	2,4-dinitrotoluene degradation
JTY_0774	PWY-6373	acrylate degradation
JTY_0783	PWY-3162	L-tryptophan degradation V (side chain pathway)
JTY_0783	PWY-5057	L-valine degradation II
JTY_0783	PWY-5076	L-leucine degradation III
JTY_0783	PWY-5078	L-isoleucine degradation II
JTY_0783	PWY-5079	L-phenylalanine degradation III
JTY_0783	PWY-5082	L-methionine degradation III
JTY_0783	PWY-5480	pyruvate fermentation to ethanol I
JTY_0783	PWY-5486	pyruvate fermentation to ethanol II
JTY_0783	PWY-5751	phenylethanol biosynthesis
JTY_0783	PWY-6028	acetoin degradation
JTY_0783	PWY-6313	serotonin degradation
JTY_0783	PWY-6333	acetaldehyde biosynthesis I
JTY_0783	PWY-6342	noradrenaline and adrenaline degradation
JTY_0783	PWY-6587	pyruvate fermentation to ethanol III
JTY_0783	PWY-6802	salidroside biosynthesis
JTY_0783	PWY-6871	3-methylbutanol biosynthesis
JTY_0783	PWY-7013	L-1,2-propanediol degradation
JTY_0783	PWY-7111	pyruvate fermentation to isobutanol (engineered)
JTY_0783	PWY-7118	chitin degradation to ethanol
JTY_0783	PWY-7396	butanol and isobutanol biosynthesis (engineered)
JTY_0783	PWY-7557	dehydrodiconiferyl alcohol degradation
JTY_0794	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
JTY_0794	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
JTY_0794	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
JTY_0795	PWY-4041	&gamma;-glutamyl cycle
JTY_0795	PWY-5826	hypoglycin biosynthesis
JTY_0799	PWY-6123	inosine-5'-phosphate biosynthesis I
JTY_0799	PWY-6124	inosine-5'-phosphate biosynthesis II
JTY_0799	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
JTY_0799	PWY-7234	inosine-5'-phosphate biosynthesis III
JTY_0802	PWY-6123	inosine-5'-phosphate biosynthesis I
JTY_0802	PWY-6124	inosine-5'-phosphate biosynthesis II
JTY_0802	PWY-7234	inosine-5'-phosphate biosynthesis III
JTY_0810	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
JTY_0810	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
JTY_0810	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
JTY_0811	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
JTY_0811	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
JTY_0811	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
JTY_0825	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
JTY_0825	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
JTY_0825	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
JTY_0830	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
JTY_0830	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
JTY_0830	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
JTY_0830	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
JTY_0831	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
JTY_0831	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
JTY_0831	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
JTY_0837	PWY-5350	thiosulfate disproportionation III (rhodanese)
JTY_0847	PWY-5147	oleate biosynthesis I (plants)
JTY_0860	PWY-6454	vancomycin resistance I
JTY_0860	PWY-6455	vancomycin resistance II
JTY_0882	PWY-1361	benzoyl-CoA degradation I (aerobic)
JTY_0882	PWY-5109	2-methylbutanoate biosynthesis
JTY_0882	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
JTY_0882	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
JTY_0882	PWY-5177	glutaryl-CoA degradation
JTY_0882	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
JTY_0882	PWY-6435	4-hydroxybenzoate biosynthesis V
JTY_0882	PWY-6583	pyruvate fermentation to butanol I
JTY_0882	PWY-6863	pyruvate fermentation to hexanol
JTY_0882	PWY-6883	pyruvate fermentation to butanol II
JTY_0882	PWY-6944	androstenedione degradation
JTY_0882	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
JTY_0882	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
JTY_0882	PWY-7007	methyl ketone biosynthesis
JTY_0882	PWY-7046	4-coumarate degradation (anaerobic)
JTY_0882	PWY-7094	fatty acid salvage
JTY_0882	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
JTY_0882	PWY-735	jasmonic acid biosynthesis
JTY_0882	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
JTY_0888	PWY-6823	molybdenum cofactor biosynthesis
JTY_0891	PWY-6823	molybdenum cofactor biosynthesis
JTY_0926	PWY-4381	fatty acid biosynthesis initiation I
JTY_0926	PWY-5743	3-hydroxypropanoate cycle
JTY_0926	PWY-5744	glyoxylate assimilation
JTY_0926	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
JTY_0926	PWY-6679	jadomycin biosynthesis
JTY_0926	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
JTY_0945	PWY-4041	&gamma;-glutamyl cycle
JTY_0948	PWY-2941	L-lysine biosynthesis II
JTY_0948	PWY-2942	L-lysine biosynthesis III
JTY_0948	PWY-5097	L-lysine biosynthesis VI
JTY_0970	PWY-3801	sucrose degradation II (sucrose synthase)
JTY_0970	PWY-5054	sorbitol biosynthesis I
JTY_0970	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
JTY_0970	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
JTY_0970	PWY-5659	GDP-mannose biosynthesis
JTY_0970	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
JTY_0970	PWY-621	sucrose degradation III (sucrose invertase)
JTY_0970	PWY-622	starch biosynthesis
JTY_0970	PWY-6531	mannitol cycle
JTY_0970	PWY-6981	chitin biosynthesis
JTY_0970	PWY-7238	sucrose biosynthesis II
JTY_0970	PWY-7347	sucrose biosynthesis III
JTY_0970	PWY-7385	1,3-propanediol biosynthesis (engineered)
JTY_0972	PWY-3461	L-tyrosine biosynthesis II
JTY_0972	PWY-3462	L-phenylalanine biosynthesis II
JTY_0972	PWY-6120	L-tyrosine biosynthesis III
JTY_0972	PWY-6627	salinosporamide A biosynthesis
JTY_0975	PWY-5392	reductive TCA cycle II
JTY_0975	PWY-5537	pyruvate fermentation to acetate V
JTY_0975	PWY-5538	pyruvate fermentation to acetate VI
JTY_0975	PWY-5690	TCA cycle II (plants and fungi)
JTY_0975	PWY-5913	TCA cycle VI (obligate autotrophs)
JTY_0975	PWY-6728	methylaspartate cycle
JTY_0975	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
JTY_0975	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
JTY_0976	PWY-5392	reductive TCA cycle II
JTY_0976	PWY-5537	pyruvate fermentation to acetate V
JTY_0976	PWY-5538	pyruvate fermentation to acetate VI
JTY_0976	PWY-5690	TCA cycle II (plants and fungi)
JTY_0976	PWY-5913	TCA cycle VI (obligate autotrophs)
JTY_0976	PWY-6728	methylaspartate cycle
JTY_0976	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
JTY_0976	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
JTY_0980	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
JTY_0980	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
JTY_0981	PWY-6123	inosine-5'-phosphate biosynthesis I
JTY_0981	PWY-6124	inosine-5'-phosphate biosynthesis II
JTY_0981	PWY-7234	inosine-5'-phosphate biosynthesis III
JTY_0999	PWY-4381	fatty acid biosynthesis initiation I
JTY_0999	PWY-5743	3-hydroxypropanoate cycle
JTY_0999	PWY-5744	glyoxylate assimilation
JTY_0999	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
JTY_0999	PWY-6679	jadomycin biosynthesis
JTY_0999	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
JTY_1021	PWY-6823	molybdenum cofactor biosynthesis
JTY_1030	PWY-4981	L-proline biosynthesis II (from arginine)
JTY_1034	PWY-5958	acridone alkaloid biosynthesis
JTY_1034	PWY-6543	4-aminobenzoate biosynthesis
JTY_1034	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
JTY_1034	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
JTY_1034	PWY-6722	candicidin biosynthesis
JTY_1040	PWY-7560	methylerythritol phosphate pathway II
JTY_1047	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
JTY_1052	PWY-1042	glycolysis IV (plant cytosol)
JTY_1052	PWY-1622	formaldehyde assimilation I (serine pathway)
JTY_1052	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
JTY_1052	PWY-5484	glycolysis II (from fructose 6-phosphate)
JTY_1052	PWY-5723	Rubisco shunt
JTY_1052	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
JTY_1052	PWY-6886	1-butanol autotrophic biosynthesis
JTY_1052	PWY-6901	superpathway of glucose and xylose degradation
JTY_1052	PWY-7003	glycerol degradation to butanol
JTY_1052	PWY-7124	ethylene biosynthesis V (engineered)
JTY_1052	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
JTY_1089	PWY-2941	L-lysine biosynthesis II
JTY_1089	PWY-2942	L-lysine biosynthesis III
JTY_1089	PWY-5097	L-lysine biosynthesis VI
JTY_1095	PWY-5331	taurine biosynthesis
JTY_1108	PWY-801	L-homocysteine and L-cysteine interconversion
JTY_1123	PWY-6784	cellulose and hemicellulose degradation (cellulolosome)
JTY_1125	PWY-3961	phosphopantothenate biosynthesis II
JTY_1126	PWY-1622	formaldehyde assimilation I (serine pathway)
JTY_1126	PWY-181	photorespiration
JTY_1126	PWY-2161	folate polyglutamylation
JTY_1126	PWY-2201	folate transformations I
JTY_1126	PWY-3661	glycine betaine degradation I
JTY_1126	PWY-3661-1	glycine betaine degradation II (mammalian)
JTY_1126	PWY-3841	folate transformations II
JTY_1126	PWY-5497	purine nucleobases degradation II (anaerobic)
JTY_1127	PWY-5147	oleate biosynthesis I (plants)
JTY_1131	PWY-5392	reductive TCA cycle II
JTY_1131	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
JTY_1131	PWY-5690	TCA cycle II (plants and fungi)
JTY_1131	PWY-5913	TCA cycle VI (obligate autotrophs)
JTY_1131	PWY-6728	methylaspartate cycle
JTY_1131	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
JTY_1131	PWY-7254	TCA cycle VII (acetate-producers)
JTY_1131	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
JTY_1132	PWY-5484	glycolysis II (from fructose 6-phosphate)
JTY_1143	PWY-7560	methylerythritol phosphate pathway II
JTY_1155	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
JTY_1161	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
JTY_1161	PWY-6549	L-glutamine biosynthesis III
JTY_1161	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
JTY_1161	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
JTY_1167	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
JTY_1167	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
JTY_1167	PWY-6936	seleno-amino acid biosynthesis
JTY_1167	PWY-702	L-methionine biosynthesis II
JTY_1189	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
JTY_1189	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
JTY_1194	PWY-7158	L-phenylalanine degradation V
JTY_1209	PWY-5198	factor 420 biosynthesis
JTY_1222	PWY-6853	ethylene biosynthesis II (microbes)
JTY_1223	PWY-5737	(5<i>R</i>)-carbapenem carboxylate biosynthesis
JTY_1223	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
JTY_1241	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
JTY_1241	PWY-5143	long-chain fatty acid activation
JTY_1241	PWY-5353	arachidonate biosynthesis I (lower eukaryotes)
JTY_1241	PWY-5885	wax esters biosynthesis II
JTY_1241	PWY-5972	stearate biosynthesis I (animals and fungi)
JTY_1241	PWY-5995	linoleate biosynthesis I (plants)
JTY_1241	PWY-6000	&gamma;-linolenate biosynthesis II (animals)
JTY_1241	PWY-6001	linoleate biosynthesis II (animals)
JTY_1241	PWY-6803	phosphatidylcholine acyl editing
JTY_1241	PWY-6873	long chain fatty acid ester synthesis for microdiesel production
JTY_1241	PWY-6920	6-gingerol analog biosynthesis
JTY_1241	PWY-6951	JTY_1241
JTY_1241	PWY-7033	alkane biosynthesis II
JTY_1241	PWY-7035	(<i>Z</i>)-9-tricosene biosynthesis
JTY_1241	PWY-7049	icosapentaenoate biosynthesis II (metazoa)
JTY_1241	PWY-7053	docosahexaenoate biosynthesis I (lower eukaryotes)
JTY_1241	PWY-7094	fatty acid salvage
JTY_1241	PWY-7288	fatty acid &beta;-oxidation (peroxisome, yeast)
JTY_1242	PWY-6614	tetrahydrofolate biosynthesis
JTY_1247	PWY-622	starch biosynthesis
JTY_1248	PWY-622	starch biosynthesis
JTY_1251	PWY-6825	phosphatidylcholine biosynthesis V
JTY_1275	PWY-1622	formaldehyde assimilation I (serine pathway)
JTY_1275	PWY-5392	reductive TCA cycle II
JTY_1275	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
JTY_1275	PWY-5690	TCA cycle II (plants and fungi)
JTY_1275	PWY-5913	TCA cycle VI (obligate autotrophs)
JTY_1275	PWY-6728	methylaspartate cycle
JTY_1275	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
JTY_1275	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
JTY_1275	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
JTY_1283	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
JTY_1297	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
JTY_1313	PWY-3722	glycine betaine biosynthesis II (Gram-positive bacteria)
JTY_1313	PWY-7494	choline degradation IV
JTY_1318	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
JTY_1318	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
JTY_1318	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
JTY_1318	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
JTY_1319	PWY-5278	sulfite oxidation III
JTY_1319	PWY-5340	sulfate activation for sulfonation
JTY_1319	PWY-6683	sulfate reduction III (assimilatory)
JTY_1319	PWY-6932	selenate reduction
JTY_1320	PWY-5278	sulfite oxidation III
JTY_1320	PWY-5340	sulfate activation for sulfonation
JTY_1320	PWY-6683	sulfate reduction III (assimilatory)
JTY_1320	PWY-6932	selenate reduction
JTY_1328	PWY-2941	L-lysine biosynthesis II
JTY_1328	PWY-2942	L-lysine biosynthesis III
JTY_1328	PWY-5097	L-lysine biosynthesis VI
JTY_1331	PWY-702	L-methionine biosynthesis II
JTY_1332	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
JTY_1337	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
JTY_1337	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
JTY_1337	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
JTY_1343	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
JTY_1345	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
JTY_1349	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
JTY_1349	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
JTY_1349	PWY-6268	adenosylcobalamin salvage from cobalamin
JTY_1349	PWY-6269	adenosylcobalamin salvage from cobinamide II
JTY_1350	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
JTY_1350	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
JTY_1358	PWY-5743	3-hydroxypropanoate cycle
JTY_1358	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
JTY_1358	PWY-6728	methylaspartate cycle
JTY_1358	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
JTY_1362	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
JTY_1362	PWY-622	starch biosynthesis
JTY_1364	PWY-5941	glycogen degradation II (eukaryotic)
JTY_1364	PWY-622	starch biosynthesis
JTY_1364	PWY-6731	starch degradation III
JTY_1364	PWY-6737	starch degradation V
JTY_1364	PWY-7238	sucrose biosynthesis II
JTY_1366	PWY-5381	pyridine nucleotide cycling (plants)
JTY_1369	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
JTY_1372	PWY-6936	seleno-amino acid biosynthesis
JTY_1374	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
JTY_1374	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
JTY_1377	PWY-7206	pyrimidine deoxyribonucleotides dephosphorylation
JTY_1415	PWY-7183	pyrimidine nucleobases salvage I
JTY_1416	PWY-5686	UMP biosynthesis
JTY_1417	PWY-5686	UMP biosynthesis
JTY_1419	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
JTY_1419	PWY-5686	UMP biosynthesis
JTY_1419	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
JTY_1420	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
JTY_1420	PWY-5686	UMP biosynthesis
JTY_1420	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
JTY_1421	PWY-5686	UMP biosynthesis
JTY_1425	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
JTY_1428	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
JTY_1428	PWY-5912	2'-deoxymugineic acid phytosiderophore biosynthesis
JTY_1444	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
JTY_1444	PWY-5723	Rubisco shunt
JTY_1448	PWY-6167	flavin biosynthesis II (archaea)
JTY_1448	PWY-6168	flavin biosynthesis III (fungi)
JTY_1448	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
JTY_1449	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
JTY_1451	PWY-6167	flavin biosynthesis II (archaea)
JTY_1451	PWY-6168	flavin biosynthesis III (fungi)
JTY_1451	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
JTY_1452	PWY-6167	flavin biosynthesis II (archaea)
JTY_1452	PWY-6168	flavin biosynthesis III (fungi)
JTY_1472	PWY-1042	glycolysis IV (plant cytosol)
JTY_1472	PWY-5484	glycolysis II (from fructose 6-phosphate)
JTY_1472	PWY-6901	superpathway of glucose and xylose degradation
JTY_1472	PWY-7003	glycerol degradation to butanol
JTY_1473	PWY-1042	glycolysis IV (plant cytosol)
JTY_1473	PWY-5484	glycolysis II (from fructose 6-phosphate)
JTY_1473	PWY-6886	1-butanol autotrophic biosynthesis
JTY_1473	PWY-6901	superpathway of glucose and xylose degradation
JTY_1473	PWY-7003	glycerol degradation to butanol
JTY_1474	PWY-1042	glycolysis IV (plant cytosol)
JTY_1474	PWY-5484	glycolysis II (from fructose 6-phosphate)
JTY_1474	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
JTY_1474	PWY-7003	glycerol degradation to butanol
JTY_1481	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
JTY_1481	PWY-6855	chitin degradation I (archaea)
JTY_1481	PWY-6906	chitin derivatives degradation
JTY_1483	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
JTY_1484	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
JTY_1484	PWY-5723	Rubisco shunt
JTY_1485	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
JTY_1485	PWY-5723	Rubisco shunt
JTY_1485	PWY-6891	thiazole biosynthesis II (Bacillus)
JTY_1485	PWY-6892	thiazole biosynthesis I (E. coli)
JTY_1485	PWY-6901	superpathway of glucose and xylose degradation
JTY_1485	PWY-7560	methylerythritol phosphate pathway II
JTY_1500	PWY-6823	molybdenum cofactor biosynthesis
JTY_1500	PWY-6891	thiazole biosynthesis II (Bacillus)
JTY_1500	PWY-6892	thiazole biosynthesis I (E. coli)
JTY_1500	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
JTY_1521	PWY-5971	palmitate biosynthesis II (bacteria and plants)
JTY_1521	PWY-5973	<i>cis</i>-vaccenate biosynthesis
JTY_1521	PWY-5989	stearate biosynthesis II (bacteria and plants)
JTY_1521	PWY-6113	superpathway of mycolate biosynthesis
JTY_1521	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
JTY_1521	PWY-6519	8-amino-7-oxononanoate biosynthesis I
JTY_1521	PWY-7096	triclosan resistance
JTY_1521	PWYG-321	mycolate biosynthesis
JTY_1527	PWY-5743	3-hydroxypropanoate cycle
JTY_1527	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
JTY_1527	PWY-6728	methylaspartate cycle
JTY_1527	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
JTY_1530	PWY-5743	3-hydroxypropanoate cycle
JTY_1530	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
JTY_1530	PWY-6728	methylaspartate cycle
JTY_1530	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
JTY_1531	PWY-5743	3-hydroxypropanoate cycle
JTY_1531	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
JTY_1531	PWY-6728	methylaspartate cycle
JTY_1531	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
JTY_1542	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
JTY_1551	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
JTY_1551	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
JTY_1551	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
JTY_1551	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
JTY_1553	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
JTY_1553	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
JTY_1553	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
JTY_1553	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
JTY_1560	PWY-723	alkylnitronates degradation
JTY_1577	PWY-5667	CDP-diacylglycerol biosynthesis I
JTY_1577	PWY-7411	superpathway of phosphatidate biosynthesis (yeast)
JTY_1578	PWY-3781	aerobic respiration I (cytochrome c)
JTY_1578	PWY-4302	aerobic respiration III (alternative oxidase pathway)
JTY_1578	PWY-5392	reductive TCA cycle II
JTY_1578	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
JTY_1578	PWY-5690	TCA cycle II (plants and fungi)
JTY_1578	PWY-5913	TCA cycle VI (obligate autotrophs)
JTY_1578	PWY-6728	methylaspartate cycle
JTY_1578	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
JTY_1578	PWY-7254	TCA cycle VII (acetate-producers)
JTY_1578	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
JTY_1578	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
JTY_1579	PWY-3781	aerobic respiration I (cytochrome c)
JTY_1579	PWY-4302	aerobic respiration III (alternative oxidase pathway)
JTY_1579	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
JTY_1579	PWY-5690	TCA cycle II (plants and fungi)
JTY_1579	PWY-6728	methylaspartate cycle
JTY_1579	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
JTY_1579	PWY-7254	TCA cycle VII (acetate-producers)
JTY_1579	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
JTY_1591	PWY-2661	trehalose biosynthesis V
JTY_1598	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
JTY_1602	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
JTY_1605	PWY-6857	retinol biosynthesis
JTY_1607	PWY-5316	nicotine biosynthesis
JTY_1607	PWY-7342	superpathway of nicotine biosynthesis
JTY_1608	PWY-5316	nicotine biosynthesis
JTY_1608	PWY-7342	superpathway of nicotine biosynthesis
JTY_1609	PWY-5316	nicotine biosynthesis
JTY_1609	PWY-5381	pyridine nucleotide cycling (plants)
JTY_1609	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
JTY_1609	PWY-7342	superpathway of nicotine biosynthesis
JTY_1622	PWY-5958	acridone alkaloid biosynthesis
JTY_1622	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
JTY_1622	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
JTY_1630	PWY-1042	glycolysis IV (plant cytosol)
JTY_1630	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
JTY_1630	PWY-5484	glycolysis II (from fructose 6-phosphate)
JTY_1630	PWY-5723	Rubisco shunt
JTY_1630	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
JTY_1630	PWY-6886	1-butanol autotrophic biosynthesis
JTY_1630	PWY-6901	superpathway of glucose and xylose degradation
JTY_1630	PWY-7003	glycerol degradation to butanol
JTY_1630	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
JTY_1630	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
JTY_1640	PWY-4381	fatty acid biosynthesis initiation I
JTY_1666	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
JTY_1666	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
JTY_1667	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
JTY_1668	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
JTY_1668	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
JTY_1670	PWY-4981	L-proline biosynthesis II (from arginine)
JTY_1670	PWY-4984	urea cycle
JTY_1670	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
JTY_1672	PWY-4983	L-citrulline-nitric oxide cycle
JTY_1672	PWY-4984	urea cycle
JTY_1672	PWY-5	canavanine biosynthesis
JTY_1672	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
JTY_1672	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
JTY_1673	PWY-4983	L-citrulline-nitric oxide cycle
JTY_1673	PWY-4984	urea cycle
JTY_1673	PWY-5	canavanine biosynthesis
JTY_1673	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
JTY_1673	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
JTY_1687	PWY-5350	thiosulfate disproportionation III (rhodanese)
JTY_1708	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
JTY_1708	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
JTY_1708	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
JTY_1710	PWY-6898	thiamin salvage III
JTY_1710	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
JTY_1710	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
JTY_1712	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
JTY_1712	PWY-7177	UTP and CTP dephosphorylation II
JTY_1712	PWY-7185	UTP and CTP dephosphorylation I
JTY_1726	PWY-7205	CMP phosphorylation
JTY_1729	PWY-1361	benzoyl-CoA degradation I (aerobic)
JTY_1729	PWY-5109	2-methylbutanoate biosynthesis
JTY_1729	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
JTY_1729	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
JTY_1729	PWY-5177	glutaryl-CoA degradation
JTY_1729	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
JTY_1729	PWY-6435	4-hydroxybenzoate biosynthesis V
JTY_1729	PWY-6583	pyruvate fermentation to butanol I
JTY_1729	PWY-6863	pyruvate fermentation to hexanol
JTY_1729	PWY-6883	pyruvate fermentation to butanol II
JTY_1729	PWY-6944	androstenedione degradation
JTY_1729	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
JTY_1729	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
JTY_1729	PWY-7007	methyl ketone biosynthesis
JTY_1729	PWY-7046	4-coumarate degradation (anaerobic)
JTY_1729	PWY-7094	fatty acid salvage
JTY_1729	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
JTY_1729	PWY-735	jasmonic acid biosynthesis
JTY_1729	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
JTY_1730	PWY-5651	L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
JTY_1730	PWY-6309	L-tryptophan degradation XI (mammalian, via kynurenine)
JTY_1740	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
JTY_1740	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
JTY_1759	PWY-5123	<i>trans, trans</i>-farnesyl diphosphate biosynthesis
JTY_1759	PWY-6174	mevalonate pathway II (archaea)
JTY_1759	PWY-6383	mono-<i>trans</i>, poly-<i>cis</i> decaprenyl phosphate biosynthesis
JTY_1759	PWY-6859	<i>all-trans</i>-farnesol biosynthesis
JTY_1759	PWY-7102	bisabolene biosynthesis
JTY_1759	PWY-7391	isoprene biosynthesis II (engineered)
JTY_1759	PWY-7524	mevalonate pathway III (archaea)
JTY_1759	PWY-7560	methylerythritol phosphate pathway II
JTY_1759	PWY-922	mevalonate pathway I
JTY_1764	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
JTY_1764	PWY-5143	long-chain fatty acid activation
JTY_1764	PWY-5353	arachidonate biosynthesis I (lower eukaryotes)
JTY_1764	PWY-5885	wax esters biosynthesis II
JTY_1764	PWY-5972	stearate biosynthesis I (animals and fungi)
JTY_1764	PWY-5995	linoleate biosynthesis I (plants)
JTY_1764	PWY-6000	&gamma;-linolenate biosynthesis II (animals)
JTY_1764	PWY-6001	linoleate biosynthesis II (animals)
JTY_1764	PWY-6803	phosphatidylcholine acyl editing
JTY_1764	PWY-6873	long chain fatty acid ester synthesis for microdiesel production
JTY_1764	PWY-6920	6-gingerol analog biosynthesis
JTY_1764	PWY-6951	JTY_1764
JTY_1764	PWY-7033	alkane biosynthesis II
JTY_1764	PWY-7035	(<i>Z</i>)-9-tricosene biosynthesis
JTY_1764	PWY-7049	icosapentaenoate biosynthesis II (metazoa)
JTY_1764	PWY-7053	docosahexaenoate biosynthesis I (lower eukaryotes)
JTY_1764	PWY-7094	fatty acid salvage
JTY_1764	PWY-7288	fatty acid &beta;-oxidation (peroxisome, yeast)
JTY_1786	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
JTY_1788	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
JTY_1788	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
JTY_1791	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
JTY_1791	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
JTY_1798	PWY-5941	glycogen degradation II (eukaryotic)
JTY_1798	PWY-6724	starch degradation II
JTY_1798	PWY-6737	starch degradation V
JTY_1798	PWY-7238	sucrose biosynthesis II
JTY_1841	PWY-5269	cardiolipin biosynthesis II
JTY_1841	PWY-5668	cardiolipin biosynthesis I
JTY_1856	PWY-6728	methylaspartate cycle
JTY_1856	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
JTY_1856	PWY-7118	chitin degradation to ethanol
JTY_1856	PWY-7294	xylose degradation IV
JTY_1856	PWY-7295	L-arabinose degradation IV
JTY_1863	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
JTY_1863	PWY-6596	adenosine nucleotides degradation I
JTY_1863	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
JTY_1868	PWY-5704	urea degradation II
JTY_1869	PWY-5704	urea degradation II
JTY_1870	PWY-5704	urea degradation II
JTY_1882	PWY-3162	L-tryptophan degradation V (side chain pathway)
JTY_1882	PWY-5057	L-valine degradation II
JTY_1882	PWY-5076	L-leucine degradation III
JTY_1882	PWY-5078	L-isoleucine degradation II
JTY_1882	PWY-5079	L-phenylalanine degradation III
JTY_1882	PWY-5082	L-methionine degradation III
JTY_1882	PWY-5480	pyruvate fermentation to ethanol I
JTY_1882	PWY-5486	pyruvate fermentation to ethanol II
JTY_1882	PWY-5751	phenylethanol biosynthesis
JTY_1882	PWY-6028	acetoin degradation
JTY_1882	PWY-6313	serotonin degradation
JTY_1882	PWY-6333	acetaldehyde biosynthesis I
JTY_1882	PWY-6342	noradrenaline and adrenaline degradation
JTY_1882	PWY-6587	pyruvate fermentation to ethanol III
JTY_1882	PWY-6802	salidroside biosynthesis
JTY_1882	PWY-6871	3-methylbutanol biosynthesis
JTY_1882	PWY-7013	L-1,2-propanediol degradation
JTY_1882	PWY-7111	pyruvate fermentation to isobutanol (engineered)
JTY_1882	PWY-7118	chitin degradation to ethanol
JTY_1882	PWY-7396	butanol and isobutanol biosynthesis (engineered)
JTY_1882	PWY-7557	dehydrodiconiferyl alcohol degradation
JTY_1895	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
JTY_1895	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
JTY_1899	PWY-381	nitrate reduction II (assimilatory)
JTY_1899	PWY-5675	nitrate reduction V (assimilatory)
JTY_1899	PWY-6549	L-glutamine biosynthesis III
JTY_1899	PWY-6963	ammonia assimilation cycle I
JTY_1899	PWY-6964	ammonia assimilation cycle II
JTY_1906	PWY-3461	L-tyrosine biosynthesis II
JTY_1906	PWY-3462	L-phenylalanine biosynthesis II
JTY_1906	PWY-6120	L-tyrosine biosynthesis III
JTY_1906	PWY-6627	salinosporamide A biosynthesis
JTY_1916	PWY-723	alkylnitronates degradation
JTY_1938	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
JTY_1963	PWY-6167	flavin biosynthesis II (archaea)
JTY_1963	PWY-6168	flavin biosynthesis III (fungi)
JTY_1963	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
JTY_1992	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
JTY_1992	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
JTY_1992	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
JTY_1992	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
JTY_1992	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
JTY_1992	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
JTY_1992	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
JTY_1992	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
JTY_2074	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
JTY_2074	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
JTY_2077	PWY-6683	sulfate reduction III (assimilatory)
JTY_2079	PWY-5194	siroheme biosynthesis
JTY_2079	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
JTY_2084	PWY-5194	siroheme biosynthesis
JTY_2084	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
JTY_2085	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
JTY_2129	PWY-6829	tRNA methylation (yeast)
JTY_2135	PWY-2201	folate transformations I
JTY_2135	PWY-3841	folate transformations II
JTY_2150	PWY-5686	UMP biosynthesis
JTY_2159	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
JTY_2163	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
JTY_2163	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
JTY_2164	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
JTY_2164	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
JTY_2164	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
JTY_2164	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
JTY_2166	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
JTY_2166	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
JTY_2167	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
JTY_2167	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
JTY_2167	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
JTY_2168	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
JTY_2168	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
JTY_2187	PWY-6164	3-dehydroquinate biosynthesis I
JTY_2209	PWY-3781	aerobic respiration I (cytochrome c)
JTY_2209	PWY-4521	arsenite oxidation I (respiratory)
JTY_2209	PWY-6692	Fe(II) oxidation
JTY_2209	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
JTY_2217	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
JTY_2217	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
JTY_2217	PWY-6269	adenosylcobalamin salvage from cobinamide II
JTY_2218	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
JTY_2218	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
JTY_2218	PWY-6269	adenosylcobalamin salvage from cobinamide II
JTY_2220	PWY-5057	L-valine degradation II
JTY_2220	PWY-5076	L-leucine degradation III
JTY_2220	PWY-5078	L-isoleucine degradation II
JTY_2220	PWY-5101	L-isoleucine biosynthesis II
JTY_2220	PWY-5103	L-isoleucine biosynthesis III
JTY_2220	PWY-5104	L-isoleucine biosynthesis IV
JTY_2220	PWY-5108	L-isoleucine biosynthesis V
JTY_2223	PWY-5988	wound-induced proteolysis I
JTY_2223	PWY-6018	seed germination protein turnover
JTY_2227	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
JTY_2227	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
JTY_2228	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
JTY_2228	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
JTY_2228	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
JTY_2231	PWY-381	nitrate reduction II (assimilatory)
JTY_2231	PWY-5675	nitrate reduction V (assimilatory)
JTY_2231	PWY-6549	L-glutamine biosynthesis III
JTY_2231	PWY-6963	ammonia assimilation cycle I
JTY_2231	PWY-6964	ammonia assimilation cycle II
JTY_2233	PWY-381	nitrate reduction II (assimilatory)
JTY_2233	PWY-5675	nitrate reduction V (assimilatory)
JTY_2233	PWY-6549	L-glutamine biosynthesis III
JTY_2233	PWY-6963	ammonia assimilation cycle I
JTY_2233	PWY-6964	ammonia assimilation cycle II
JTY_2236	PWY-6654	phosphopantothenate biosynthesis III
JTY_2242	PWY-5663	tetrahydrobiopterin biosynthesis I
JTY_2242	PWY-5664	tetrahydrobiopterin biosynthesis II
JTY_2242	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
JTY_2242	PWY-6703	preQ<sub>0</sub> biosynthesis
JTY_2242	PWY-6983	tetrahydrobiopterin biosynthesis III
JTY_2242	PWY-7442	drosopterin and aurodrosopterin biosynthesis
JTY_2252	PWY-6891	thiazole biosynthesis II (Bacillus)
JTY_2252	PWY-6892	thiazole biosynthesis I (E. coli)
JTY_2252	PWY-7560	methylerythritol phosphate pathway II
JTY_2258	PWY-4381	fatty acid biosynthesis initiation I
JTY_2258	PWY-5743	3-hydroxypropanoate cycle
JTY_2258	PWY-5744	glyoxylate assimilation
JTY_2258	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
JTY_2258	PWY-6679	jadomycin biosynthesis
JTY_2258	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
JTY_2261	PWY-4261	glycerol degradation I
JTY_2261	PWY-6118	glycerol-3-phosphate shuttle
JTY_2261	PWY-6952	glycerophosphodiester degradation
JTY_2263	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
JTY_2263	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
JTY_2289	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
JTY_2289	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
JTY_2302	PWY-5350	thiosulfate disproportionation III (rhodanese)
JTY_2336	PWY-3341	L-proline biosynthesis III
JTY_2336	PWY-4981	L-proline biosynthesis II (from arginine)
JTY_2336	PWY-6344	L-ornithine degradation II (Stickland reaction)
JTY_2336	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
JTY_2337	PWY-3341	L-proline biosynthesis III
JTY_2337	PWY-4981	L-proline biosynthesis II (from arginine)
JTY_2337	PWY-6344	L-ornithine degradation II (Stickland reaction)
JTY_2337	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
JTY_2338	PWY-4981	L-proline biosynthesis II (from arginine)
JTY_2350	PWY-6936	seleno-amino acid biosynthesis
JTY_2351	PWY-6936	seleno-amino acid biosynthesis
JTY_2351	PWY-7274	D-cycloserine biosynthesis
JTY_2371	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
JTY_2394	PWY-3461	L-tyrosine biosynthesis II
JTY_2394	PWY-3462	L-phenylalanine biosynthesis II
JTY_2394	PWY-5791	1,4-dihydroxy-2-naphthoate biosynthesis II (plants)
JTY_2394	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
JTY_2394	PWY-5901	2,3-dihydroxybenzoate biosynthesis
JTY_2394	PWY-5958	acridone alkaloid biosynthesis
JTY_2394	PWY-6120	L-tyrosine biosynthesis III
JTY_2394	PWY-6406	salicylate biosynthesis I
JTY_2394	PWY-6627	salinosporamide A biosynthesis
JTY_2394	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
JTY_2394	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
JTY_2399	PWY-6683	sulfate reduction III (assimilatory)
JTY_2401	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
JTY_2402	PWY-4041	&gamma;-glutamyl cycle
JTY_2402	PWY-5826	hypoglycin biosynthesis
JTY_2431	PWY-5381	pyridine nucleotide cycling (plants)
JTY_2431	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
JTY_2450	PWY-6825	phosphatidylcholine biosynthesis V
JTY_2451	PWY-5381	pyridine nucleotide cycling (plants)
JTY_2451	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
JTY_2459	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
JTY_2459	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
JTY_2459	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
JTY_2459	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
JTY_2459	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
JTY_2459	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
JTY_2459	PWY-7205	CMP phosphorylation
JTY_2459	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
JTY_2459	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
JTY_2459	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
JTY_2459	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
JTY_2459	PWY-7224	purine deoxyribonucleosides salvage
JTY_2459	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
JTY_2459	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
JTY_2461	PWY-2161	folate polyglutamylation
JTY_2467	PWY-5964	guanylyl molybdenum cofactor biosynthesis
JTY_2479	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
JTY_2479	PWY-5723	Rubisco shunt
JTY_2481	PWY-4061	glutathione-mediated detoxification I
JTY_2481	PWY-6842	glutathione-mediated detoxification II
JTY_2481	PWY-7112	4-hydroxy-2-nonenal detoxification
JTY_2490	PWY-5022	4-aminobutanoate degradation V
JTY_2490	PWY-6728	methylaspartate cycle
JTY_2490	PWY-7126	ethylene biosynthesis IV
JTY_2494	PWY-5667	CDP-diacylglycerol biosynthesis I
JTY_2494	PWY-7411	superpathway of phosphatidate biosynthesis (yeast)
JTY_2506	PWY-3841	folate transformations II
JTY_2506	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
JTY_2506	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
JTY_2506	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
JTY_2506	PWY-7199	pyrimidine deoxyribonucleosides salvage
JTY_2506	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
JTY_2516	PWY-4381	fatty acid biosynthesis initiation I
JTY_2516	PWY-5743	3-hydroxypropanoate cycle
JTY_2516	PWY-5744	glyoxylate assimilation
JTY_2516	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
JTY_2516	PWY-6679	jadomycin biosynthesis
JTY_2516	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
JTY_2538	PWY-6012	acyl carrier protein metabolism I
JTY_2538	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
JTY_2539	PWY-4381	fatty acid biosynthesis initiation I
JTY_2539	PWY-5142	acyl-ACP thioesterase pathway
JTY_2539	PWY-5147	oleate biosynthesis I (plants)
JTY_2539	PWY-5366	palmitoleate biosynthesis II (plants and bacteria)
JTY_2539	PWY-5367	petroselinate biosynthesis
JTY_2539	PWY-5966	fatty acid biosynthesis initiation II
JTY_2539	PWY-5971	palmitate biosynthesis II (bacteria and plants)
JTY_2539	PWY-5973	<i>cis</i>-vaccenate biosynthesis
JTY_2539	PWY-5989	stearate biosynthesis II (bacteria and plants)
JTY_2539	PWY-5994	palmitate biosynthesis I (animals and fungi)
JTY_2539	PWY-6113	superpathway of mycolate biosynthesis
JTY_2539	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
JTY_2539	PWY-6519	8-amino-7-oxononanoate biosynthesis I
JTY_2539	PWY-6799	fatty acid biosynthesis (plant mitochondria)
JTY_2539	PWY-7096	triclosan resistance
JTY_2539	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
JTY_2539	PWYG-321	mycolate biosynthesis
JTY_2553	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
JTY_2553	PWY-6416	quinate degradation II
JTY_2553	PWY-6707	gallate biosynthesis
JTY_2554	PWY-6164	3-dehydroquinate biosynthesis I
JTY_2555	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
JTY_2556	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
JTY_2569	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
JTY_2569	PWY-6164	3-dehydroquinate biosynthesis I
JTY_2569	PWY-6416	quinate degradation II
JTY_2569	PWY-6707	gallate biosynthesis
JTY_2590	PWY-6654	phosphopantothenate biosynthesis III
JTY_2601	PWY-6605	adenine and adenosine salvage II
JTY_2601	PWY-6610	adenine and adenosine salvage IV
JTY_2623	PWY-6466	pyridoxal 5'-phosphate biosynthesis II
JTY_2625	PWY-6466	pyridoxal 5'-phosphate biosynthesis II
JTY_2626	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
JTY_2626	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
JTY_2684	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
JTY_2684	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
JTY_2685	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
JTY_2685	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
JTY_2689	PWY-6891	thiazole biosynthesis II (Bacillus)
JTY_2689	PWY-6892	thiazole biosynthesis I (E. coli)
JTY_2689	PWY-7560	methylerythritol phosphate pathway II
JTY_2704	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
JTY_2704	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
JTY_2704	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
JTY_2704	PWY-7206	pyrimidine deoxyribonucleotides dephosphorylation
JTY_2720	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
JTY_2733	PWY-2941	L-lysine biosynthesis II
JTY_2733	PWY-5097	L-lysine biosynthesis VI
JTY_2734	PWY-2781	<i>cis</i>-zeatin biosynthesis
JTY_2747	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
JTY_2747	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
JTY_2747	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
JTY_2747	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
JTY_2756	PWY-5269	cardiolipin biosynthesis II
JTY_2756	PWY-5668	cardiolipin biosynthesis I
JTY_2763	PWY-2941	L-lysine biosynthesis II
JTY_2763	PWY-2942	L-lysine biosynthesis III
JTY_2763	PWY-5097	L-lysine biosynthesis VI
JTY_2764	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
JTY_2774	PWY-3841	folate transformations II
JTY_2774	PWY-6614	tetrahydrofolate biosynthesis
JTY_2775	PWY-3841	folate transformations II
JTY_2775	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
JTY_2775	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
JTY_2775	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
JTY_2775	PWY-7199	pyrimidine deoxyribonucleosides salvage
JTY_2775	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
JTY_2784	PWY-2941	L-lysine biosynthesis II
JTY_2784	PWY-2942	L-lysine biosynthesis III
JTY_2784	PWY-5097	L-lysine biosynthesis VI
JTY_2793	PWY-723	alkylnitronates degradation
JTY_2798	PWY-5523	5,6-dimethylbenzimidazole biosynthesis
JTY_2798	PWY-6167	flavin biosynthesis II (archaea)
JTY_2798	PWY-6168	flavin biosynthesis III (fungi)
JTY_2806	PWY-6012	acyl carrier protein metabolism I
JTY_2806	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
JTY_2862	PWY-5194	siroheme biosynthesis
JTY_2862	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
JTY_2864	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
JTY_2864	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
JTY_2864	PWY-6268	adenosylcobalamin salvage from cobalamin
JTY_2864	PWY-6269	adenosylcobalamin salvage from cobinamide II
JTY_2867	PWY-7254	TCA cycle VII (acetate-producers)
JTY_2870	PWY-6421	arsenate detoxification III (mycothiol)
JTY_2877	PWY-381	nitrate reduction II (assimilatory)
JTY_2877	PWY-5675	nitrate reduction V (assimilatory)
JTY_2877	PWY-6549	L-glutamine biosynthesis III
JTY_2877	PWY-6963	ammonia assimilation cycle I
JTY_2877	PWY-6964	ammonia assimilation cycle II
JTY_2885	PWY-7560	methylerythritol phosphate pathway II
JTY_2887	PWY-7560	methylerythritol phosphate pathway II
JTY_2904	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
JTY_2922	PWY-6829	tRNA methylation (yeast)
JTY_2922	PWY-7285	methylwyosine biosynthesis
JTY_2922	PWY-7286	7-(3-amino-3-carboxypropyl)-wyosine biosynthesis
JTY_2980	PWY-2201	folate transformations I
JTY_2980	PWY-5497	purine nucleobases degradation II (anaerobic)
JTY_2983	PWY-5750	itaconate biosynthesis
JTY_2983	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
JTY_2983	PWY-6146	<i>Methanobacterium thermoautotrophicum</i> biosynthetic metabolism
JTY_2993	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
JTY_2993	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
JTY_2993	PWY-6896	thiamin salvage I
JTY_2993	PWY-6897	thiamin salvage II
JTY_2997	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
JTY_2997	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
JTY_2998	PWY-5667	CDP-diacylglycerol biosynthesis I
JTY_2998	PWY-5981	CDP-diacylglycerol biosynthesis III
JTY_2999	PWY-5198	factor 420 biosynthesis
JTY_3007	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
JTY_3007	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
JTY_3008	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
JTY_3011	PWY-7396	butanol and isobutanol biosynthesis (engineered)
JTY_3018	PWY-5101	L-isoleucine biosynthesis II
JTY_3018	PWY-5103	L-isoleucine biosynthesis III
JTY_3018	PWY-5104	L-isoleucine biosynthesis IV
JTY_3018	PWY-7111	pyruvate fermentation to isobutanol (engineered)
JTY_3019	PWY-5101	L-isoleucine biosynthesis II
JTY_3019	PWY-5103	L-isoleucine biosynthesis III
JTY_3019	PWY-5104	L-isoleucine biosynthesis IV
JTY_3019	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
JTY_3019	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
JTY_3019	PWY-6389	(<i>S</i>)-acetoin biosynthesis
JTY_3019	PWY-7111	pyruvate fermentation to isobutanol (engineered)
JTY_3020	PWY-5101	L-isoleucine biosynthesis II
JTY_3020	PWY-5103	L-isoleucine biosynthesis III
JTY_3020	PWY-5104	L-isoleucine biosynthesis IV
JTY_3020	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
JTY_3020	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
JTY_3020	PWY-6389	(<i>S</i>)-acetoin biosynthesis
JTY_3020	PWY-7111	pyruvate fermentation to isobutanol (engineered)
JTY_3027	PWY-1042	glycolysis IV (plant cytosol)
JTY_3027	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
JTY_3027	PWY-5484	glycolysis II (from fructose 6-phosphate)
JTY_3027	PWY-7385	1,3-propanediol biosynthesis (engineered)
JTY_3028	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
JTY_3032	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
JTY_3032	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
JTY_3032	PWY-6936	seleno-amino acid biosynthesis
JTY_3032	PWY-702	L-methionine biosynthesis II
JTY_3043	PWY-6823	molybdenum cofactor biosynthesis
JTY_3043	PWY-6891	thiazole biosynthesis II (Bacillus)
JTY_3043	PWY-6892	thiazole biosynthesis I (E. coli)
JTY_3043	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
JTY_3049	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
JTY_3049	PWY-622	starch biosynthesis
JTY_3062	PWY-3781	aerobic respiration I (cytochrome c)
JTY_3062	PWY-4521	arsenite oxidation I (respiratory)
JTY_3062	PWY-6692	Fe(II) oxidation
JTY_3062	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
JTY_3067	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
JTY_3067	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
JTY_3067	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
JTY_3067	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
JTY_3067	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
JTY_3067	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
JTY_3067	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
JTY_3067	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
JTY_3070	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
JTY_3070	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
JTY_3070	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
JTY_3070	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
JTY_3070	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
JTY_3070	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
JTY_3070	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
JTY_3070	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
JTY_3088	PWY-2723	trehalose degradation V
JTY_3088	PWY-3801	sucrose degradation II (sucrose synthase)
JTY_3088	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
JTY_3088	PWY-5661	GDP-glucose biosynthesis
JTY_3088	PWY-5661-1	JTY_3088
JTY_3088	PWY-5940	streptomycin biosynthesis
JTY_3088	PWY-5941	glycogen degradation II (eukaryotic)
JTY_3088	PWY-622	starch biosynthesis
JTY_3088	PWY-6731	starch degradation III
JTY_3088	PWY-6737	starch degradation V
JTY_3088	PWY-6749	CMP-legionaminate biosynthesis I
JTY_3088	PWY-7238	sucrose biosynthesis II
JTY_3088	PWY-7343	UDP-glucose biosynthesis
JTY_3106	PWY-3162	L-tryptophan degradation V (side chain pathway)
JTY_3106	PWY-5057	L-valine degradation II
JTY_3106	PWY-5076	L-leucine degradation III
JTY_3106	PWY-5078	L-isoleucine degradation II
JTY_3106	PWY-5079	L-phenylalanine degradation III
JTY_3106	PWY-5082	L-methionine degradation III
JTY_3106	PWY-5480	pyruvate fermentation to ethanol I
JTY_3106	PWY-5486	pyruvate fermentation to ethanol II
JTY_3106	PWY-5751	phenylethanol biosynthesis
JTY_3106	PWY-6028	acetoin degradation
JTY_3106	PWY-6313	serotonin degradation
JTY_3106	PWY-6333	acetaldehyde biosynthesis I
JTY_3106	PWY-6342	noradrenaline and adrenaline degradation
JTY_3106	PWY-6587	pyruvate fermentation to ethanol III
JTY_3106	PWY-6802	salidroside biosynthesis
JTY_3106	PWY-6871	3-methylbutanol biosynthesis
JTY_3106	PWY-7013	L-1,2-propanediol degradation
JTY_3106	PWY-7111	pyruvate fermentation to isobutanol (engineered)
JTY_3106	PWY-7118	chitin degradation to ethanol
JTY_3106	PWY-7396	butanol and isobutanol biosynthesis (engineered)
JTY_3106	PWY-7557	dehydrodiconiferyl alcohol degradation
JTY_3127	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
JTY_3127	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
JTY_3129	PWY-6823	molybdenum cofactor biosynthesis
JTY_3130	PWY-7158	L-phenylalanine degradation V
JTY_3150	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
JTY_3150	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
JTY_3150	PWY-6268	adenosylcobalamin salvage from cobalamin
JTY_3150	PWY-6269	adenosylcobalamin salvage from cobinamide II
JTY_3194	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
JTY_3219	PWY-5381	pyridine nucleotide cycling (plants)
JTY_3237	PWY-5791	1,4-dihydroxy-2-naphthoate biosynthesis II (plants)
JTY_3237	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
JTY_3237	PWY-5901	2,3-dihydroxybenzoate biosynthesis
JTY_3237	PWY-6406	salicylate biosynthesis I
JTY_3240	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
JTY_3240	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
JTY_3240	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
JTY_3252	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
JTY_3272	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
JTY_3272	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
JTY_3272	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
JTY_3272	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
JTY_3272	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
JTY_3272	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
JTY_3273	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
JTY_3280	PWY-3861	mannitol degradation II
JTY_3280	PWY-3881	mannitol biosynthesis
JTY_3280	PWY-5659	GDP-mannose biosynthesis
JTY_3280	PWY-7456	mannan degradation
JTY_3280	PWY-882	L-ascorbate biosynthesis I (L-galactose pathway)
JTY_3282	PWY-6749	CMP-legionaminate biosynthesis I
JTY_3286	PWY-5198	factor 420 biosynthesis
JTY_3287	PWY-5199	factor 420 polyglutamylation
JTY_3298	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
JTY_3298	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
JTY_3298	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
JTY_3298	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
JTY_3300	PWY-6123	inosine-5'-phosphate biosynthesis I
JTY_3300	PWY-7234	inosine-5'-phosphate biosynthesis III
JTY_3304	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
JTY_3304	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
JTY_3305	PWY-4381	fatty acid biosynthesis initiation I
JTY_3305	PWY-5743	3-hydroxypropanoate cycle
JTY_3305	PWY-5744	glyoxylate assimilation
JTY_3305	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
JTY_3305	PWY-6679	jadomycin biosynthesis
JTY_3305	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
JTY_3308	PWY-5350	thiosulfate disproportionation III (rhodanese)
JTY_3315	PWY-5298	L-lysine degradation VI
JTY_3327	PWY-4261	glycerol degradation I
JTY_3327	PWY-6118	glycerol-3-phosphate shuttle
JTY_3327	PWY-6952	glycerophosphodiester degradation
JTY_3329	PWY-4041	&gamma;-glutamyl cycle
JTY_3332	PWY-4202	arsenate detoxification I (glutaredoxin)
JTY_3332	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
JTY_3332	PWY-6608	guanosine nucleotides degradation III
JTY_3332	PWY-6609	adenine and adenosine salvage III
JTY_3332	PWY-6611	adenine and adenosine salvage V
JTY_3332	PWY-6620	guanine and guanosine salvage
JTY_3332	PWY-6627	salinosporamide A biosynthesis
JTY_3332	PWY-6644	fluoroacetate and fluorothreonine biosynthesis
JTY_3332	PWY-7179	purine deoxyribonucleosides degradation I
JTY_3332	PWY-7179-1	purine deoxyribonucleosides degradation
JTY_3333	PWY-6749	CMP-legionaminate biosynthesis I
JTY_3334	PWY-7183	pyrimidine nucleobases salvage I
JTY_3339	PWY-6609	adenine and adenosine salvage III
JTY_3339	PWY-6611	adenine and adenosine salvage V
JTY_3339	PWY-7179	purine deoxyribonucleosides degradation I
JTY_3339	PWY-7179-1	purine deoxyribonucleosides degradation
JTY_3340	PWY-7181	pyrimidine deoxyribonucleosides degradation
JTY_3347	PWY-4261	glycerol degradation I
JTY_3347	PWY-6118	glycerol-3-phosphate shuttle
JTY_3347	PWY-6952	glycerophosphodiester degradation
JTY_3349	PWY-4041	&gamma;-glutamyl cycle
JTY_3352	PWY-4202	arsenate detoxification I (glutaredoxin)
JTY_3352	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
JTY_3352	PWY-6608	guanosine nucleotides degradation III
JTY_3352	PWY-6609	adenine and adenosine salvage III
JTY_3352	PWY-6611	adenine and adenosine salvage V
JTY_3352	PWY-6620	guanine and guanosine salvage
JTY_3352	PWY-6627	salinosporamide A biosynthesis
JTY_3352	PWY-6644	fluoroacetate and fluorothreonine biosynthesis
JTY_3352	PWY-7179	purine deoxyribonucleosides degradation I
JTY_3352	PWY-7179-1	purine deoxyribonucleosides degradation
JTY_3353	PWY-6749	CMP-legionaminate biosynthesis I
JTY_3354	PWY-7183	pyrimidine nucleobases salvage I
JTY_3359	PWY-6609	adenine and adenosine salvage III
JTY_3359	PWY-6611	adenine and adenosine salvage V
JTY_3359	PWY-7179	purine deoxyribonucleosides degradation I
JTY_3359	PWY-7179-1	purine deoxyribonucleosides degradation
JTY_3360	PWY-7181	pyrimidine deoxyribonucleosides degradation
JTY_3367	PWY-4261	glycerol degradation I
JTY_3367	PWY-6118	glycerol-3-phosphate shuttle
JTY_3367	PWY-6952	glycerophosphodiester degradation
JTY_3369	PWY-4041	&gamma;-glutamyl cycle
JTY_3372	PWY-4202	arsenate detoxification I (glutaredoxin)
JTY_3372	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
JTY_3372	PWY-6608	guanosine nucleotides degradation III
JTY_3372	PWY-6609	adenine and adenosine salvage III
JTY_3372	PWY-6611	adenine and adenosine salvage V
JTY_3372	PWY-6620	guanine and guanosine salvage
JTY_3372	PWY-6627	salinosporamide A biosynthesis
JTY_3372	PWY-6644	fluoroacetate and fluorothreonine biosynthesis
JTY_3372	PWY-7179	purine deoxyribonucleosides degradation I
JTY_3372	PWY-7179-1	purine deoxyribonucleosides degradation
JTY_3373	PWY-6749	CMP-legionaminate biosynthesis I
JTY_3374	PWY-7183	pyrimidine nucleobases salvage I
JTY_3379	PWY-6609	adenine and adenosine salvage III
JTY_3379	PWY-6611	adenine and adenosine salvage V
JTY_3379	PWY-7179	purine deoxyribonucleosides degradation I
JTY_3379	PWY-7179-1	purine deoxyribonucleosides degradation
JTY_3380	PWY-7181	pyrimidine deoxyribonucleosides degradation
JTY_3384	PWY-3781	aerobic respiration I (cytochrome c)
JTY_3384	PWY-4302	aerobic respiration III (alternative oxidase pathway)
JTY_3384	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
JTY_3384	PWY-5690	TCA cycle II (plants and fungi)
JTY_3384	PWY-6728	methylaspartate cycle
JTY_3384	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
JTY_3384	PWY-7254	TCA cycle VII (acetate-producers)
JTY_3384	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
JTY_3385	PWY-3781	aerobic respiration I (cytochrome c)
JTY_3385	PWY-4302	aerobic respiration III (alternative oxidase pathway)
JTY_3385	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
JTY_3385	PWY-5690	TCA cycle II (plants and fungi)
JTY_3385	PWY-6728	methylaspartate cycle
JTY_3385	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
JTY_3385	PWY-7254	TCA cycle VII (acetate-producers)
JTY_3385	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
JTY_3389	PWY-6823	molybdenum cofactor biosynthesis
JTY_3391	PWY-7158	L-phenylalanine degradation V
JTY_3392	PWY-6823	molybdenum cofactor biosynthesis
JTY_3402	PWY-6906	chitin derivatives degradation
JTY_3402	PWY-7077	<i>N</i>-acetyl-D-galactosamine degradation
JTY_3402	PWY-7395	D-galactosamine and <i>N</i>-acetyl-D-galactosamine degradation
JTY_3409	PWY-5913	TCA cycle VI (obligate autotrophs)
JTY_3409	PWY-6549	L-glutamine biosynthesis III
JTY_3409	PWY-6728	methylaspartate cycle
JTY_3409	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
JTY_3409	PWY-7124	ethylene biosynthesis V (engineered)
JTY_3409	PWY-7254	TCA cycle VII (acetate-producers)
JTY_3409	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
JTY_3410	PWY-5344	L-homocysteine biosynthesis
JTY_3410	PWY-7174	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation II
JTY_3411	PWY-5344	L-homocysteine biosynthesis
JTY_3424	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
JTY_3424	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
JTY_3428	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
JTY_3428	PWY-2201	folate transformations I
JTY_3428	PWY-3841	folate transformations II
JTY_3428	PWY-5030	L-histidine degradation III
JTY_3428	PWY-5497	purine nucleobases degradation II (anaerobic)
JTY_3428	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
JTY_3441	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
JTY_3441	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
JTY_3446	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
JTY_3450	PWY-6891	thiazole biosynthesis II (Bacillus)
JTY_3450	PWY-6892	thiazole biosynthesis I (E. coli)
JTY_3450	PWY-7560	methylerythritol phosphate pathway II
JTY_3451	PWY-7560	methylerythritol phosphate pathway II
JTY_3466	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
JTY_3481	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
JTY_3481	PWY-6596	adenosine nucleotides degradation I
JTY_3481	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
JTY_3493	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
JTY_3498	PWY-4321	L-glutamate degradation IV
JTY_3499	PWY-6938	NADH repair
JTY_3502	PWY-6749	CMP-legionaminate biosynthesis I
JTY_3507	PWY-6749	CMP-legionaminate biosynthesis I
JTY_3529	PWY-3221	dTDP-L-rhamnose biosynthesis II
JTY_3529	PWY-6808	dTDP-D-forosamine biosynthesis
JTY_3529	PWY-6942	dTDP-D-desosamine biosynthesis
JTY_3529	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
JTY_3529	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
JTY_3529	PWY-6974	dTDP-L-olivose biosynthesis
JTY_3529	PWY-6976	dTDP-L-mycarose biosynthesis
JTY_3529	PWY-7104	dTDP-L-megosamine biosynthesis
JTY_3529	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
JTY_3529	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
JTY_3529	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
JTY_3529	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
JTY_3529	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
JTY_3529	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
JTY_3529	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
JTY_3529	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
JTY_3534	PWY-5162	2-oxopentenoate degradation
JTY_3570	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
JTY_3570	PWY-5143	long-chain fatty acid activation
JTY_3570	PWY-5353	arachidonate biosynthesis I (lower eukaryotes)
JTY_3570	PWY-5885	wax esters biosynthesis II
JTY_3570	PWY-5972	stearate biosynthesis I (animals and fungi)
JTY_3570	PWY-5995	linoleate biosynthesis I (plants)
JTY_3570	PWY-6000	&gamma;-linolenate biosynthesis II (animals)
JTY_3570	PWY-6001	linoleate biosynthesis II (animals)
JTY_3570	PWY-6803	phosphatidylcholine acyl editing
JTY_3570	PWY-6873	long chain fatty acid ester synthesis for microdiesel production
JTY_3570	PWY-6920	6-gingerol analog biosynthesis
JTY_3570	PWY-6951	JTY_3570
JTY_3570	PWY-7033	alkane biosynthesis II
JTY_3570	PWY-7035	(<i>Z</i>)-9-tricosene biosynthesis
JTY_3570	PWY-7049	icosapentaenoate biosynthesis II (metazoa)
JTY_3570	PWY-7053	docosahexaenoate biosynthesis I (lower eukaryotes)
JTY_3570	PWY-7094	fatty acid salvage
JTY_3570	PWY-7288	fatty acid &beta;-oxidation (peroxisome, yeast)
JTY_3584	PWY-5451	acetone degradation I (to methylglyoxal)
JTY_3584	PWY-6588	pyruvate fermentation to acetone
JTY_3584	PWY-6876	isopropanol biosynthesis
JTY_3584	PWY-7466	acetone degradation III (to propane-1,2-diol)
JTY_3599	PWY-5162	2-oxopentenoate degradation
JTY_3600	PWY-5162	2-oxopentenoate degradation
JTY_3600	PWY-5436	L-threonine degradation IV
JTY_3600	PWY-5480	pyruvate fermentation to ethanol I
JTY_3600	PWY-6587	pyruvate fermentation to ethanol III
JTY_3600	PWY-7085	triethylamine degradation
JTY_3600	PWY-7180	2'-deoxy-&alpha;-D-ribose 1-phosphate degradation
JTY_3618	PWY-723	alkylnitronates degradation
JTY_3631	PWY-7153	grixazone biosynthesis
JTY_3647	PWY-7560	methylerythritol phosphate pathway II
JTY_3648	PWY-7560	methylerythritol phosphate pathway II
JTY_3654	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
JTY_3654	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
JTY_3654	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
JTY_3654	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
JTY_3665	PWY-3961	phosphopantothenate biosynthesis II
JTY_3666	PWY-5155	&beta;-alanine biosynthesis III
JTY_3671	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
JTY_3671	PWY-6148	tetrahydromethanopterin biosynthesis
JTY_3671	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
JTY_3671	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
JTY_3672	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
JTY_3672	PWY-6148	tetrahydromethanopterin biosynthesis
JTY_3672	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
JTY_3672	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
JTY_3673	PWY-6614	tetrahydrofolate biosynthesis
JTY_3674	PWY-5663	tetrahydrobiopterin biosynthesis I
JTY_3674	PWY-5664	tetrahydrobiopterin biosynthesis II
JTY_3674	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
JTY_3674	PWY-6703	preQ<sub>0</sub> biosynthesis
JTY_3674	PWY-6983	tetrahydrobiopterin biosynthesis III
JTY_3674	PWY-7442	drosopterin and aurodrosopterin biosynthesis
JTY_3683	PWY-6599	guanine and guanosine salvage II
JTY_3683	PWY-6609	adenine and adenosine salvage III
JTY_3683	PWY-6610	adenine and adenosine salvage IV
JTY_3683	PWY-6620	guanine and guanosine salvage
JTY_3686	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
JTY_3686	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
JTY_3756	PWY-4261	glycerol degradation I
JTY_3765	PWY-6840	homoglutathione biosynthesis
JTY_3765	PWY-7255	ergothioneine biosynthesis I (bacteria)
JTY_3770	PWY-2941	L-lysine biosynthesis II
JTY_3770	PWY-2942	L-lysine biosynthesis III
JTY_3770	PWY-5097	L-lysine biosynthesis VI
JTY_3770	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
JTY_3770	PWY-6559	spermidine biosynthesis II
JTY_3770	PWY-6562	norspermidine biosynthesis
JTY_3770	PWY-7153	grixazone biosynthesis
JTY_3770	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
JTY_3771	PWY-2941	L-lysine biosynthesis II
JTY_3771	PWY-2942	L-lysine biosynthesis III
JTY_3771	PWY-5097	L-lysine biosynthesis VI
JTY_3771	PWY-6559	spermidine biosynthesis II
JTY_3771	PWY-6562	norspermidine biosynthesis
JTY_3771	PWY-7153	grixazone biosynthesis
JTY_3772	PWY-6871	3-methylbutanol biosynthesis
JTY_3781	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
JTY_3781	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
JTY_3854	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
JTY_3854	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
JTY_3863	PWY-4381	fatty acid biosynthesis initiation I
JTY_3863	PWY-5743	3-hydroxypropanoate cycle
JTY_3863	PWY-5744	glyoxylate assimilation
JTY_3863	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
JTY_3863	PWY-6679	jadomycin biosynthesis
JTY_3863	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
JTY_3873	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
JTY_3873	PWY-7328	superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
JTY_3899	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
JTY_3903	PWY-7432	L-phenylalanine biosynthesis III (cytosolic, plants)
JTY_3911	PWY-6854	ethylene biosynthesis III (microbes)
