TBXG_000013	PWY-5958	acridone alkaloid biosynthesis
TBXG_000013	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
TBXG_000013	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
TBXG_000021	PWY-723	alkylnitronates degradation
TBXG_000035	PWY-7285	methylwyosine biosynthesis
TBXG_000035	PWY-7286	7-(3-amino-3-carboxypropyl)-wyosine biosynthesis
TBXG_000045	PWY-2301	<i>myo</i>-inositol biosynthesis
TBXG_000045	PWY-4661	1D-<i>myo</i>-inositol hexakisphosphate biosynthesis III (<i>Spirodela polyrrhiza</i>)
TBXG_000045	PWY-6372	1D-<i>myo</i>-inositol hexakisphosphate biosynthesis IV (<i>Dictyostelium</i>)
TBXG_000045	PWY-6580	phosphatidylinositol biosynthesis I (bacteria)
TBXG_000045	PWY-6664	di-myo-inositol phosphate biosynthesis
TBXG_000062	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
TBXG_000062	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
TBXG_000066	PWY-5913	TCA cycle VI (obligate autotrophs)
TBXG_000066	PWY-6549	L-glutamine biosynthesis III
TBXG_000066	PWY-6728	methylaspartate cycle
TBXG_000066	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
TBXG_000066	PWY-7124	ethylene biosynthesis V (engineered)
TBXG_000066	PWY-7254	TCA cycle VII (acetate-producers)
TBXG_000066	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
TBXG_000070	PWY-1622	formaldehyde assimilation I (serine pathway)
TBXG_000070	PWY-181	photorespiration
TBXG_000070	PWY-2161	folate polyglutamylation
TBXG_000070	PWY-2201	folate transformations I
TBXG_000070	PWY-3661	glycine betaine degradation I
TBXG_000070	PWY-3661-1	glycine betaine degradation II (mammalian)
TBXG_000070	PWY-3841	folate transformations II
TBXG_000070	PWY-5497	purine nucleobases degradation II (anaerobic)
TBXG_000114	PWY-6478	GDP-D-<i>glycero</i>-&alpha;-D-<i>manno</i>-heptose biosynthesis
TBXG_000116	PWY-6478	GDP-D-<i>glycero</i>-&alpha;-D-<i>manno</i>-heptose biosynthesis
TBXG_000119	PWY-6695	oxalate degradation II
TBXG_000119	PWY-6696	oxalate degradation III
TBXG_000122	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
TBXG_000122	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
TBXG_000127	PWY-2622	trehalose biosynthesis IV
TBXG_000163	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
TBXG_000163	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
TBXG_000191	PWY-5101	L-isoleucine biosynthesis II
TBXG_000191	PWY-5103	L-isoleucine biosynthesis III
TBXG_000191	PWY-5104	L-isoleucine biosynthesis IV
TBXG_000191	PWY-7111	pyruvate fermentation to isobutanol (engineered)
TBXG_000213	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
TBXG_000218	PWY-5741	ethylmalonyl-CoA pathway
TBXG_000218	PWY-5744	glyoxylate assimilation
TBXG_000218	PWY-6728	methylaspartate cycle
TBXG_000235	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
TBXG_000235	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
TBXG_000235	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
TBXG_000235	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
TBXG_000235	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
TBXG_000235	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
TBXG_000235	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
TBXG_000235	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
TBXG_000238	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
TBXG_000250	PWY-3781	aerobic respiration I (cytochrome c)
TBXG_000250	PWY-4302	aerobic respiration III (alternative oxidase pathway)
TBXG_000250	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
TBXG_000250	PWY-5690	TCA cycle II (plants and fungi)
TBXG_000250	PWY-6728	methylaspartate cycle
TBXG_000250	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
TBXG_000250	PWY-7254	TCA cycle VII (acetate-producers)
TBXG_000250	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
TBXG_000255	PWY-6683	sulfate reduction III (assimilatory)
TBXG_000257	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
TBXG_000257	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
TBXG_000257	PWY-6269	adenosylcobalamin salvage from cobinamide II
TBXG_000262	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
TBXG_000263	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
TBXG_000263	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
TBXG_000309	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
TBXG_000309	PWY-5523	5,6-dimethylbenzimidazole biosynthesis
TBXG_000319	PWY-6185	4-methylcatechol degradation (<i>ortho</i> cleavage)
TBXG_000324	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
TBXG_000325	PWY-7346	UDP-&alpha;-D-glucuronate biosynthesis (from UDP-glucose)
TBXG_000327	PWY-5350	thiosulfate disproportionation III (rhodanese)
TBXG_000336	PWY-3221	dTDP-L-rhamnose biosynthesis II
TBXG_000336	PWY-6808	dTDP-D-forosamine biosynthesis
TBXG_000336	PWY-6942	dTDP-D-desosamine biosynthesis
TBXG_000336	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
TBXG_000336	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
TBXG_000336	PWY-6974	dTDP-L-olivose biosynthesis
TBXG_000336	PWY-6976	dTDP-L-mycarose biosynthesis
TBXG_000336	PWY-7104	dTDP-L-megosamine biosynthesis
TBXG_000336	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
TBXG_000336	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
TBXG_000336	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
TBXG_000336	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
TBXG_000336	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
TBXG_000336	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
TBXG_000336	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
TBXG_000336	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
TBXG_000359	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
TBXG_000365	PWY-1042	glycolysis IV (plant cytosol)
TBXG_000365	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
TBXG_000365	PWY-5484	glycolysis II (from fructose 6-phosphate)
TBXG_000365	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
TBXG_000365	PWY-7385	1,3-propanediol biosynthesis (engineered)
TBXG_000375	PWY-5372	carbon tetrachloride degradation II
TBXG_000375	PWY-6780	hydrogen production VI
TBXG_000381	PWY-5686	UMP biosynthesis
TBXG_000407	PWY-1281	sulfoacetaldehyde degradation I
TBXG_000407	PWY-5482	pyruvate fermentation to acetate II
TBXG_000407	PWY-5485	pyruvate fermentation to acetate IV
TBXG_000407	PWY-5497	purine nucleobases degradation II (anaerobic)
TBXG_000407	PWY-6637	sulfolactate degradation II
TBXG_000408	PWY-5482	pyruvate fermentation to acetate II
TBXG_000408	PWY-5485	pyruvate fermentation to acetate IV
TBXG_000408	PWY-5497	purine nucleobases degradation II (anaerobic)
TBXG_000413	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
TBXG_000413	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
TBXG_000413	PWY-6897	thiamin salvage II
TBXG_000413	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
TBXG_000413	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
TBXG_000413	PWY-7353	4-methyl-5(&beta;-hydroxyethyl)thiazole salvage (yeast)
TBXG_000413	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
TBXG_000416	PWY-6891	thiazole biosynthesis II (Bacillus)
TBXG_000416	PWY-6892	thiazole biosynthesis I (E. coli)
TBXG_000421	PWY-6910	hydroxymethylpyrimidine salvage
TBXG_000421	PWY-7356	thiamin salvage IV (yeast)
TBXG_000421	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
TBXG_000422	PWY-6890	4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis
TBXG_000431	PWY-6854	ethylene biosynthesis III (microbes)
TBXG_000432	PWY-6840	homoglutathione biosynthesis
TBXG_000432	PWY-7255	ergothioneine biosynthesis I (bacteria)
TBXG_000435	PWY-5669	phosphatidylethanolamine biosynthesis I
TBXG_000436	PWY-5669	phosphatidylethanolamine biosynthesis I
TBXG_000437	PWY-6823	molybdenum cofactor biosynthesis
TBXG_000462	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
TBXG_000462	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
TBXG_000467	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
TBXG_000468	PWY-1361	benzoyl-CoA degradation I (aerobic)
TBXG_000468	PWY-5109	2-methylbutanoate biosynthesis
TBXG_000468	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
TBXG_000468	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
TBXG_000468	PWY-5177	glutaryl-CoA degradation
TBXG_000468	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
TBXG_000468	PWY-6435	4-hydroxybenzoate biosynthesis V
TBXG_000468	PWY-6583	pyruvate fermentation to butanol I
TBXG_000468	PWY-6863	pyruvate fermentation to hexanol
TBXG_000468	PWY-6883	pyruvate fermentation to butanol II
TBXG_000468	PWY-6944	androstenedione degradation
TBXG_000468	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
TBXG_000468	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
TBXG_000468	PWY-7007	methyl ketone biosynthesis
TBXG_000468	PWY-7046	4-coumarate degradation (anaerobic)
TBXG_000468	PWY-7094	fatty acid salvage
TBXG_000468	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
TBXG_000468	PWY-735	jasmonic acid biosynthesis
TBXG_000468	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
TBXG_000479	PWY-7180	2'-deoxy-&alpha;-D-ribose 1-phosphate degradation
TBXG_000483	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
TBXG_000483	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
TBXG_000490	PWY-1622	formaldehyde assimilation I (serine pathway)
TBXG_000490	PWY-5484	glycolysis II (from fructose 6-phosphate)
TBXG_000502	PWY-3341	L-proline biosynthesis III
TBXG_000502	PWY-4981	L-proline biosynthesis II (from arginine)
TBXG_000502	PWY-6344	L-ornithine degradation II (Stickland reaction)
TBXG_000513	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
TBXG_000514	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
TBXG_000514	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
TBXG_000515	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
TBXG_000515	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
TBXG_000516	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
TBXG_000516	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
TBXG_000528	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
TBXG_000536	PWY-4381	fatty acid biosynthesis initiation I
TBXG_000537	PWY-5839	menaquinol-7 biosynthesis
TBXG_000537	PWY-5851	demethylmenaquinol-9 biosynthesis
TBXG_000537	PWY-5852	demethylmenaquinol-8 biosynthesis I
TBXG_000537	PWY-5853	demethylmenaquinol-6 biosynthesis I
TBXG_000537	PWY-5890	menaquinol-10 biosynthesis
TBXG_000537	PWY-5891	menaquinol-11 biosynthesis
TBXG_000537	PWY-5892	menaquinol-12 biosynthesis
TBXG_000537	PWY-5895	menaquinol-13 biosynthesis
TBXG_000551	PWY-5791	1,4-dihydroxy-2-naphthoate biosynthesis II (plants)
TBXG_000551	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
TBXG_000555	PWY-5791	1,4-dihydroxy-2-naphthoate biosynthesis II (plants)
TBXG_000555	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
TBXG_000557	PWY-5791	1,4-dihydroxy-2-naphthoate biosynthesis II (plants)
TBXG_000557	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
TBXG_000560	PWY-5839	menaquinol-7 biosynthesis
TBXG_000560	PWY-5844	menaquinol-9 biosynthesis
TBXG_000560	PWY-5849	menaquinol-6 biosynthesis
TBXG_000560	PWY-5890	menaquinol-10 biosynthesis
TBXG_000560	PWY-5891	menaquinol-11 biosynthesis
TBXG_000560	PWY-5892	menaquinol-12 biosynthesis
TBXG_000560	PWY-5895	menaquinol-13 biosynthesis
TBXG_000566	PWY-5667	CDP-diacylglycerol biosynthesis I
TBXG_000566	PWY-5981	CDP-diacylglycerol biosynthesis III
TBXG_000572	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
TBXG_000572	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
TBXG_000572	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
TBXG_000572	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
TBXG_000572	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
TBXG_000572	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
TBXG_000572	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
TBXG_000572	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
TBXG_000575	PWY-5381	pyridine nucleotide cycling (plants)
TBXG_000621	PWY-6317	galactose degradation I (Leloir pathway)
TBXG_000621	PWY-6527	stachyose degradation
TBXG_000622	PWY-3821	galactose degradation III
TBXG_000622	PWY-6317	galactose degradation I (Leloir pathway)
TBXG_000622	PWY-6527	stachyose degradation
TBXG_000675	PWY-6483	ceramide degradation
TBXG_000675	PWY-7119	sphingolipid recycling and degradation (yeast)
TBXG_000701	PWY-6167	flavin biosynthesis II (archaea)
TBXG_000740	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
TBXG_000760	PWY-5642	2,4-dinitrotoluene degradation
TBXG_000760	PWY-6373	acrylate degradation
TBXG_000769	PWY-3162	L-tryptophan degradation V (side chain pathway)
TBXG_000769	PWY-5057	L-valine degradation II
TBXG_000769	PWY-5076	L-leucine degradation III
TBXG_000769	PWY-5078	L-isoleucine degradation II
TBXG_000769	PWY-5079	L-phenylalanine degradation III
TBXG_000769	PWY-5082	L-methionine degradation III
TBXG_000769	PWY-5480	pyruvate fermentation to ethanol I
TBXG_000769	PWY-5486	pyruvate fermentation to ethanol II
TBXG_000769	PWY-5751	phenylethanol biosynthesis
TBXG_000769	PWY-6028	acetoin degradation
TBXG_000769	PWY-6313	serotonin degradation
TBXG_000769	PWY-6333	acetaldehyde biosynthesis I
TBXG_000769	PWY-6342	noradrenaline and adrenaline degradation
TBXG_000769	PWY-6587	pyruvate fermentation to ethanol III
TBXG_000769	PWY-6802	salidroside biosynthesis
TBXG_000769	PWY-6871	3-methylbutanol biosynthesis
TBXG_000769	PWY-7013	L-1,2-propanediol degradation
TBXG_000769	PWY-7111	pyruvate fermentation to isobutanol (engineered)
TBXG_000769	PWY-7118	chitin degradation to ethanol
TBXG_000769	PWY-7396	butanol and isobutanol biosynthesis (engineered)
TBXG_000769	PWY-7557	dehydrodiconiferyl alcohol degradation
TBXG_000780	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
TBXG_000780	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
TBXG_000780	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
TBXG_000781	PWY-4041	&gamma;-glutamyl cycle
TBXG_000781	PWY-5826	hypoglycin biosynthesis
TBXG_000785	PWY-6123	inosine-5'-phosphate biosynthesis I
TBXG_000785	PWY-6124	inosine-5'-phosphate biosynthesis II
TBXG_000785	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
TBXG_000785	PWY-7234	inosine-5'-phosphate biosynthesis III
TBXG_000788	PWY-6123	inosine-5'-phosphate biosynthesis I
TBXG_000788	PWY-6124	inosine-5'-phosphate biosynthesis II
TBXG_000788	PWY-7234	inosine-5'-phosphate biosynthesis III
TBXG_000796	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
TBXG_000796	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
TBXG_000796	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
TBXG_000797	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
TBXG_000797	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
TBXG_000797	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
TBXG_000810	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
TBXG_000810	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
TBXG_000810	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
TBXG_000815	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
TBXG_000815	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
TBXG_000815	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
TBXG_000815	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
TBXG_000816	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
TBXG_000816	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
TBXG_000816	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
TBXG_000822	PWY-5350	thiosulfate disproportionation III (rhodanese)
TBXG_000831	PWY-5147	oleate biosynthesis I (plants)
TBXG_000848	PWY-7158	L-phenylalanine degradation V
TBXG_000849	PWY-6823	molybdenum cofactor biosynthesis
TBXG_000851	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
TBXG_000851	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
TBXG_000873	PWY-3162	L-tryptophan degradation V (side chain pathway)
TBXG_000873	PWY-5057	L-valine degradation II
TBXG_000873	PWY-5076	L-leucine degradation III
TBXG_000873	PWY-5078	L-isoleucine degradation II
TBXG_000873	PWY-5079	L-phenylalanine degradation III
TBXG_000873	PWY-5082	L-methionine degradation III
TBXG_000873	PWY-5480	pyruvate fermentation to ethanol I
TBXG_000873	PWY-5486	pyruvate fermentation to ethanol II
TBXG_000873	PWY-5751	phenylethanol biosynthesis
TBXG_000873	PWY-6028	acetoin degradation
TBXG_000873	PWY-6313	serotonin degradation
TBXG_000873	PWY-6333	acetaldehyde biosynthesis I
TBXG_000873	PWY-6342	noradrenaline and adrenaline degradation
TBXG_000873	PWY-6587	pyruvate fermentation to ethanol III
TBXG_000873	PWY-6802	salidroside biosynthesis
TBXG_000873	PWY-6871	3-methylbutanol biosynthesis
TBXG_000873	PWY-7013	L-1,2-propanediol degradation
TBXG_000873	PWY-7111	pyruvate fermentation to isobutanol (engineered)
TBXG_000873	PWY-7118	chitin degradation to ethanol
TBXG_000873	PWY-7396	butanol and isobutanol biosynthesis (engineered)
TBXG_000873	PWY-7557	dehydrodiconiferyl alcohol degradation
TBXG_000891	PWY-2723	trehalose degradation V
TBXG_000891	PWY-3801	sucrose degradation II (sucrose synthase)
TBXG_000891	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
TBXG_000891	PWY-5661	GDP-glucose biosynthesis
TBXG_000891	PWY-5661-1	TBXG_000891
TBXG_000891	PWY-5940	streptomycin biosynthesis
TBXG_000891	PWY-5941	glycogen degradation II (eukaryotic)
TBXG_000891	PWY-622	starch biosynthesis
TBXG_000891	PWY-6731	starch degradation III
TBXG_000891	PWY-6737	starch degradation V
TBXG_000891	PWY-6749	CMP-legionaminate biosynthesis I
TBXG_000891	PWY-7238	sucrose biosynthesis II
TBXG_000891	PWY-7343	UDP-glucose biosynthesis
TBXG_000908	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
TBXG_000908	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
TBXG_000908	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
TBXG_000908	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
TBXG_000908	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
TBXG_000908	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
TBXG_000908	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
TBXG_000908	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
TBXG_000911	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
TBXG_000911	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
TBXG_000911	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
TBXG_000911	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
TBXG_000911	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
TBXG_000911	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
TBXG_000911	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
TBXG_000911	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
TBXG_000916	PWY-3781	aerobic respiration I (cytochrome c)
TBXG_000916	PWY-4521	arsenite oxidation I (respiratory)
TBXG_000916	PWY-6692	Fe(II) oxidation
TBXG_000916	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
TBXG_000928	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
TBXG_000928	PWY-622	starch biosynthesis
TBXG_000934	PWY-6823	molybdenum cofactor biosynthesis
TBXG_000934	PWY-6891	thiazole biosynthesis II (Bacillus)
TBXG_000934	PWY-6892	thiazole biosynthesis I (E. coli)
TBXG_000934	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
TBXG_000945	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
TBXG_000945	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
TBXG_000945	PWY-6936	seleno-amino acid biosynthesis
TBXG_000945	PWY-702	L-methionine biosynthesis II
TBXG_000949	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
TBXG_000950	PWY-1042	glycolysis IV (plant cytosol)
TBXG_000950	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
TBXG_000950	PWY-5484	glycolysis II (from fructose 6-phosphate)
TBXG_000950	PWY-7385	1,3-propanediol biosynthesis (engineered)
TBXG_000957	PWY-5101	L-isoleucine biosynthesis II
TBXG_000957	PWY-5103	L-isoleucine biosynthesis III
TBXG_000957	PWY-5104	L-isoleucine biosynthesis IV
TBXG_000957	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
TBXG_000957	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
TBXG_000957	PWY-6389	(<i>S</i>)-acetoin biosynthesis
TBXG_000957	PWY-7111	pyruvate fermentation to isobutanol (engineered)
TBXG_000958	PWY-5101	L-isoleucine biosynthesis II
TBXG_000958	PWY-5103	L-isoleucine biosynthesis III
TBXG_000958	PWY-5104	L-isoleucine biosynthesis IV
TBXG_000958	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
TBXG_000958	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
TBXG_000958	PWY-6389	(<i>S</i>)-acetoin biosynthesis
TBXG_000958	PWY-7111	pyruvate fermentation to isobutanol (engineered)
TBXG_000959	PWY-5101	L-isoleucine biosynthesis II
TBXG_000959	PWY-5103	L-isoleucine biosynthesis III
TBXG_000959	PWY-5104	L-isoleucine biosynthesis IV
TBXG_000959	PWY-7111	pyruvate fermentation to isobutanol (engineered)
TBXG_000965	PWY-7396	butanol and isobutanol biosynthesis (engineered)
TBXG_000968	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
TBXG_000969	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
TBXG_000969	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
TBXG_000977	PWY-5198	factor 420 biosynthesis
TBXG_000978	PWY-5667	CDP-diacylglycerol biosynthesis I
TBXG_000978	PWY-5981	CDP-diacylglycerol biosynthesis III
TBXG_000979	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
TBXG_000979	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
TBXG_000983	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
TBXG_000983	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
TBXG_000983	PWY-6896	thiamin salvage I
TBXG_000983	PWY-6897	thiamin salvage II
TBXG_000993	PWY-5750	itaconate biosynthesis
TBXG_000993	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
TBXG_000993	PWY-6146	<i>Methanobacterium thermoautotrophicum</i> biosynthetic metabolism
TBXG_000997	PWY-2201	folate transformations I
TBXG_000997	PWY-5497	purine nucleobases degradation II (anaerobic)
TBXG_001055	PWY-6829	tRNA methylation (yeast)
TBXG_001055	PWY-7285	methylwyosine biosynthesis
TBXG_001055	PWY-7286	7-(3-amino-3-carboxypropyl)-wyosine biosynthesis
TBXG_001073	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
TBXG_001089	PWY-7560	methylerythritol phosphate pathway II
TBXG_001091	PWY-7560	methylerythritol phosphate pathway II
TBXG_001100	PWY-381	nitrate reduction II (assimilatory)
TBXG_001100	PWY-5675	nitrate reduction V (assimilatory)
TBXG_001100	PWY-6549	L-glutamine biosynthesis III
TBXG_001100	PWY-6963	ammonia assimilation cycle I
TBXG_001100	PWY-6964	ammonia assimilation cycle II
TBXG_001107	PWY-6421	arsenate detoxification III (mycothiol)
TBXG_001110	PWY-7254	TCA cycle VII (acetate-producers)
TBXG_001113	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
TBXG_001113	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
TBXG_001113	PWY-6268	adenosylcobalamin salvage from cobalamin
TBXG_001113	PWY-6269	adenosylcobalamin salvage from cobinamide II
TBXG_001115	PWY-5194	siroheme biosynthesis
TBXG_001115	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
TBXG_001169	PWY-6012	acyl carrier protein metabolism I
TBXG_001169	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
TBXG_001177	PWY-5523	5,6-dimethylbenzimidazole biosynthesis
TBXG_001177	PWY-6167	flavin biosynthesis II (archaea)
TBXG_001177	PWY-6168	flavin biosynthesis III (fungi)
TBXG_001182	PWY-723	alkylnitronates degradation
TBXG_001191	PWY-2941	L-lysine biosynthesis II
TBXG_001191	PWY-2942	L-lysine biosynthesis III
TBXG_001191	PWY-5097	L-lysine biosynthesis VI
TBXG_001201	PWY-3841	folate transformations II
TBXG_001201	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
TBXG_001201	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
TBXG_001201	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
TBXG_001201	PWY-7199	pyrimidine deoxyribonucleosides salvage
TBXG_001201	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
TBXG_001202	PWY-3841	folate transformations II
TBXG_001202	PWY-6614	tetrahydrofolate biosynthesis
TBXG_001211	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
TBXG_001212	PWY-2941	L-lysine biosynthesis II
TBXG_001212	PWY-2942	L-lysine biosynthesis III
TBXG_001212	PWY-5097	L-lysine biosynthesis VI
TBXG_001219	PWY-5269	cardiolipin biosynthesis II
TBXG_001219	PWY-5668	cardiolipin biosynthesis I
TBXG_001227	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
TBXG_001227	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
TBXG_001227	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
TBXG_001227	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
TBXG_001239	PWY-2781	<i>cis</i>-zeatin biosynthesis
TBXG_001240	PWY-2941	L-lysine biosynthesis II
TBXG_001240	PWY-5097	L-lysine biosynthesis VI
TBXG_001252	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
TBXG_001267	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
TBXG_001267	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
TBXG_001267	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
TBXG_001267	PWY-7206	pyrimidine deoxyribonucleotides dephosphorylation
TBXG_001282	PWY-6891	thiazole biosynthesis II (Bacillus)
TBXG_001282	PWY-6892	thiazole biosynthesis I (E. coli)
TBXG_001282	PWY-7560	methylerythritol phosphate pathway II
TBXG_001286	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
TBXG_001286	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
TBXG_001287	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
TBXG_001287	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
TBXG_001353	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
TBXG_001353	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
TBXG_001354	PWY-6466	pyridoxal 5'-phosphate biosynthesis II
TBXG_001356	PWY-6466	pyridoxal 5'-phosphate biosynthesis II
TBXG_001376	PWY-6605	adenine and adenosine salvage II
TBXG_001376	PWY-6610	adenine and adenosine salvage IV
TBXG_001387	PWY-6654	phosphopantothenate biosynthesis III
TBXG_001408	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
TBXG_001408	PWY-6164	3-dehydroquinate biosynthesis I
TBXG_001408	PWY-6416	quinate degradation II
TBXG_001408	PWY-6707	gallate biosynthesis
TBXG_001421	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
TBXG_001422	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
TBXG_001423	PWY-6164	3-dehydroquinate biosynthesis I
TBXG_001424	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
TBXG_001424	PWY-6416	quinate degradation II
TBXG_001424	PWY-6707	gallate biosynthesis
TBXG_001435	PWY-4381	fatty acid biosynthesis initiation I
TBXG_001435	PWY-5142	acyl-ACP thioesterase pathway
TBXG_001435	PWY-5147	oleate biosynthesis I (plants)
TBXG_001435	PWY-5366	palmitoleate biosynthesis II (plants and bacteria)
TBXG_001435	PWY-5367	petroselinate biosynthesis
TBXG_001435	PWY-5966	fatty acid biosynthesis initiation II
TBXG_001435	PWY-5971	palmitate biosynthesis II (bacteria and plants)
TBXG_001435	PWY-5973	<i>cis</i>-vaccenate biosynthesis
TBXG_001435	PWY-5989	stearate biosynthesis II (bacteria and plants)
TBXG_001435	PWY-5994	palmitate biosynthesis I (animals and fungi)
TBXG_001435	PWY-6113	superpathway of mycolate biosynthesis
TBXG_001435	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
TBXG_001435	PWY-6519	8-amino-7-oxononanoate biosynthesis I
TBXG_001435	PWY-6799	fatty acid biosynthesis (plant mitochondria)
TBXG_001435	PWY-7096	triclosan resistance
TBXG_001435	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
TBXG_001435	PWYG-321	mycolate biosynthesis
TBXG_001436	PWY-6012	acyl carrier protein metabolism I
TBXG_001436	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
TBXG_001456	PWY-4381	fatty acid biosynthesis initiation I
TBXG_001456	PWY-5743	3-hydroxypropanoate cycle
TBXG_001456	PWY-5744	glyoxylate assimilation
TBXG_001456	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
TBXG_001456	PWY-6679	jadomycin biosynthesis
TBXG_001456	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
TBXG_001478	PWY-5667	CDP-diacylglycerol biosynthesis I
TBXG_001478	PWY-7411	superpathway of phosphatidate biosynthesis (yeast)
TBXG_001483	PWY-5022	4-aminobutanoate degradation V
TBXG_001483	PWY-6728	methylaspartate cycle
TBXG_001483	PWY-7126	ethylene biosynthesis IV
TBXG_001492	PWY-4061	glutathione-mediated detoxification I
TBXG_001492	PWY-6842	glutathione-mediated detoxification II
TBXG_001492	PWY-7112	4-hydroxy-2-nonenal detoxification
TBXG_001494	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
TBXG_001494	PWY-5723	Rubisco shunt
TBXG_001506	PWY-5964	guanylyl molybdenum cofactor biosynthesis
TBXG_001511	PWY-2161	folate polyglutamylation
TBXG_001513	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
TBXG_001513	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
TBXG_001513	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
TBXG_001513	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
TBXG_001513	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
TBXG_001513	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
TBXG_001513	PWY-7205	CMP phosphorylation
TBXG_001513	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
TBXG_001513	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
TBXG_001513	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
TBXG_001513	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
TBXG_001513	PWY-7224	purine deoxyribonucleosides salvage
TBXG_001513	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
TBXG_001513	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
TBXG_001520	PWY-5381	pyridine nucleotide cycling (plants)
TBXG_001520	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
TBXG_001521	PWY-6825	phosphatidylcholine biosynthesis V
TBXG_001539	PWY-5381	pyridine nucleotide cycling (plants)
TBXG_001539	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
TBXG_001567	PWY-4041	&gamma;-glutamyl cycle
TBXG_001567	PWY-5826	hypoglycin biosynthesis
TBXG_001568	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
TBXG_001570	PWY-6683	sulfate reduction III (assimilatory)
TBXG_001575	PWY-3461	L-tyrosine biosynthesis II
TBXG_001575	PWY-3462	L-phenylalanine biosynthesis II
TBXG_001575	PWY-5791	1,4-dihydroxy-2-naphthoate biosynthesis II (plants)
TBXG_001575	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
TBXG_001575	PWY-5901	2,3-dihydroxybenzoate biosynthesis
TBXG_001575	PWY-5958	acridone alkaloid biosynthesis
TBXG_001575	PWY-6120	L-tyrosine biosynthesis III
TBXG_001575	PWY-6406	salicylate biosynthesis I
TBXG_001575	PWY-6627	salinosporamide A biosynthesis
TBXG_001575	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
TBXG_001575	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
TBXG_001597	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
TBXG_001628	PWY-6936	seleno-amino acid biosynthesis
TBXG_001628	PWY-7274	D-cycloserine biosynthesis
TBXG_001641	PWY-4981	L-proline biosynthesis II (from arginine)
TBXG_001642	PWY-3341	L-proline biosynthesis III
TBXG_001642	PWY-4981	L-proline biosynthesis II (from arginine)
TBXG_001642	PWY-6344	L-ornithine degradation II (Stickland reaction)
TBXG_001642	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
TBXG_001675	PWY-5350	thiosulfate disproportionation III (rhodanese)
TBXG_001687	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
TBXG_001687	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
TBXG_001711	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
TBXG_001711	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
TBXG_001713	PWY-4261	glycerol degradation I
TBXG_001713	PWY-6118	glycerol-3-phosphate shuttle
TBXG_001713	PWY-6952	glycerophosphodiester degradation
TBXG_001715	PWY-4381	fatty acid biosynthesis initiation I
TBXG_001715	PWY-5743	3-hydroxypropanoate cycle
TBXG_001715	PWY-5744	glyoxylate assimilation
TBXG_001715	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
TBXG_001715	PWY-6679	jadomycin biosynthesis
TBXG_001715	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
TBXG_001721	PWY-6891	thiazole biosynthesis II (Bacillus)
TBXG_001721	PWY-6892	thiazole biosynthesis I (E. coli)
TBXG_001721	PWY-7560	methylerythritol phosphate pathway II
TBXG_001732	PWY-5663	tetrahydrobiopterin biosynthesis I
TBXG_001732	PWY-5664	tetrahydrobiopterin biosynthesis II
TBXG_001732	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
TBXG_001732	PWY-6703	preQ<sub>0</sub> biosynthesis
TBXG_001732	PWY-6983	tetrahydrobiopterin biosynthesis III
TBXG_001732	PWY-7442	drosopterin and aurodrosopterin biosynthesis
TBXG_001737	PWY-6654	phosphopantothenate biosynthesis III
TBXG_001740	PWY-381	nitrate reduction II (assimilatory)
TBXG_001740	PWY-5675	nitrate reduction V (assimilatory)
TBXG_001740	PWY-6549	L-glutamine biosynthesis III
TBXG_001740	PWY-6963	ammonia assimilation cycle I
TBXG_001740	PWY-6964	ammonia assimilation cycle II
TBXG_001742	PWY-381	nitrate reduction II (assimilatory)
TBXG_001742	PWY-5675	nitrate reduction V (assimilatory)
TBXG_001742	PWY-6549	L-glutamine biosynthesis III
TBXG_001742	PWY-6963	ammonia assimilation cycle I
TBXG_001742	PWY-6964	ammonia assimilation cycle II
TBXG_001745	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
TBXG_001745	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
TBXG_001745	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
TBXG_001746	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
TBXG_001746	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
TBXG_001750	PWY-5988	wound-induced proteolysis I
TBXG_001750	PWY-6018	seed germination protein turnover
TBXG_001755	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
TBXG_001755	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
TBXG_001755	PWY-6269	adenosylcobalamin salvage from cobinamide II
TBXG_001756	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
TBXG_001756	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
TBXG_001756	PWY-6269	adenosylcobalamin salvage from cobinamide II
TBXG_001764	PWY-3781	aerobic respiration I (cytochrome c)
TBXG_001764	PWY-4521	arsenite oxidation I (respiratory)
TBXG_001764	PWY-6692	Fe(II) oxidation
TBXG_001764	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
TBXG_001786	PWY-6164	3-dehydroquinate biosynthesis I
TBXG_001806	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
TBXG_001806	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
TBXG_001807	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
TBXG_001807	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
TBXG_001807	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
TBXG_001808	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
TBXG_001808	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
TBXG_001810	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
TBXG_001810	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
TBXG_001810	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
TBXG_001810	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
TBXG_001811	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
TBXG_001811	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
TBXG_001815	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
TBXG_001825	PWY-5686	UMP biosynthesis
TBXG_001840	PWY-2201	folate transformations I
TBXG_001840	PWY-3841	folate transformations II
TBXG_001846	PWY-6829	tRNA methylation (yeast)
TBXG_001892	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
TBXG_001892	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
TBXG_001894	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
TBXG_001895	PWY-5194	siroheme biosynthesis
TBXG_001895	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
TBXG_001900	PWY-5194	siroheme biosynthesis
TBXG_001900	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
TBXG_001902	PWY-6683	sulfate reduction III (assimilatory)
TBXG_001906	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
TBXG_001906	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
TBXG_001992	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
TBXG_001992	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
TBXG_001992	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
TBXG_001992	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
TBXG_001992	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
TBXG_001992	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
TBXG_001992	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
TBXG_001992	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
TBXG_002034	PWY-6167	flavin biosynthesis II (archaea)
TBXG_002034	PWY-6168	flavin biosynthesis III (fungi)
TBXG_002034	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
TBXG_002081	PWY-723	alkylnitronates degradation
TBXG_002091	PWY-3461	L-tyrosine biosynthesis II
TBXG_002091	PWY-3462	L-phenylalanine biosynthesis II
TBXG_002091	PWY-6120	L-tyrosine biosynthesis III
TBXG_002091	PWY-6627	salinosporamide A biosynthesis
TBXG_002098	PWY-381	nitrate reduction II (assimilatory)
TBXG_002098	PWY-5675	nitrate reduction V (assimilatory)
TBXG_002098	PWY-6549	L-glutamine biosynthesis III
TBXG_002098	PWY-6963	ammonia assimilation cycle I
TBXG_002098	PWY-6964	ammonia assimilation cycle II
TBXG_002101	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
TBXG_002101	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
TBXG_002114	PWY-3162	L-tryptophan degradation V (side chain pathway)
TBXG_002114	PWY-5057	L-valine degradation II
TBXG_002114	PWY-5076	L-leucine degradation III
TBXG_002114	PWY-5078	L-isoleucine degradation II
TBXG_002114	PWY-5079	L-phenylalanine degradation III
TBXG_002114	PWY-5082	L-methionine degradation III
TBXG_002114	PWY-5480	pyruvate fermentation to ethanol I
TBXG_002114	PWY-5486	pyruvate fermentation to ethanol II
TBXG_002114	PWY-5751	phenylethanol biosynthesis
TBXG_002114	PWY-6028	acetoin degradation
TBXG_002114	PWY-6313	serotonin degradation
TBXG_002114	PWY-6333	acetaldehyde biosynthesis I
TBXG_002114	PWY-6342	noradrenaline and adrenaline degradation
TBXG_002114	PWY-6587	pyruvate fermentation to ethanol III
TBXG_002114	PWY-6802	salidroside biosynthesis
TBXG_002114	PWY-6871	3-methylbutanol biosynthesis
TBXG_002114	PWY-7013	L-1,2-propanediol degradation
TBXG_002114	PWY-7111	pyruvate fermentation to isobutanol (engineered)
TBXG_002114	PWY-7118	chitin degradation to ethanol
TBXG_002114	PWY-7396	butanol and isobutanol biosynthesis (engineered)
TBXG_002114	PWY-7557	dehydrodiconiferyl alcohol degradation
TBXG_002126	PWY-5704	urea degradation II
TBXG_002127	PWY-5704	urea degradation II
TBXG_002128	PWY-5704	urea degradation II
TBXG_002133	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
TBXG_002133	PWY-6596	adenosine nucleotides degradation I
TBXG_002133	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
TBXG_002139	PWY-6728	methylaspartate cycle
TBXG_002139	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
TBXG_002139	PWY-7118	chitin degradation to ethanol
TBXG_002139	PWY-7294	xylose degradation IV
TBXG_002139	PWY-7295	L-arabinose degradation IV
TBXG_002154	PWY-5269	cardiolipin biosynthesis II
TBXG_002154	PWY-5668	cardiolipin biosynthesis I
TBXG_002196	PWY-5941	glycogen degradation II (eukaryotic)
TBXG_002196	PWY-6724	starch degradation II
TBXG_002196	PWY-6737	starch degradation V
TBXG_002196	PWY-7238	sucrose biosynthesis II
TBXG_002203	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
TBXG_002203	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
TBXG_002206	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
TBXG_002206	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
TBXG_002208	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
TBXG_002226	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
TBXG_002226	PWY-5143	long-chain fatty acid activation
TBXG_002226	PWY-5353	arachidonate biosynthesis I (lower eukaryotes)
TBXG_002226	PWY-5885	wax esters biosynthesis II
TBXG_002226	PWY-5972	stearate biosynthesis I (animals and fungi)
TBXG_002226	PWY-5995	linoleate biosynthesis I (plants)
TBXG_002226	PWY-6000	&gamma;-linolenate biosynthesis II (animals)
TBXG_002226	PWY-6001	linoleate biosynthesis II (animals)
TBXG_002226	PWY-6803	phosphatidylcholine acyl editing
TBXG_002226	PWY-6873	long chain fatty acid ester synthesis for microdiesel production
TBXG_002226	PWY-6920	6-gingerol analog biosynthesis
TBXG_002226	PWY-6951	TBXG_002226
TBXG_002226	PWY-7033	alkane biosynthesis II
TBXG_002226	PWY-7035	(<i>Z</i>)-9-tricosene biosynthesis
TBXG_002226	PWY-7049	icosapentaenoate biosynthesis II (metazoa)
TBXG_002226	PWY-7053	docosahexaenoate biosynthesis I (lower eukaryotes)
TBXG_002226	PWY-7094	fatty acid salvage
TBXG_002226	PWY-7288	fatty acid &beta;-oxidation (peroxisome, yeast)
TBXG_002231	PWY-5123	<i>trans, trans</i>-farnesyl diphosphate biosynthesis
TBXG_002231	PWY-6174	mevalonate pathway II (archaea)
TBXG_002231	PWY-6383	mono-<i>trans</i>, poly-<i>cis</i> decaprenyl phosphate biosynthesis
TBXG_002231	PWY-6859	<i>all-trans</i>-farnesol biosynthesis
TBXG_002231	PWY-7102	bisabolene biosynthesis
TBXG_002231	PWY-7391	isoprene biosynthesis II (engineered)
TBXG_002231	PWY-7524	mevalonate pathway III (archaea)
TBXG_002231	PWY-7560	methylerythritol phosphate pathway II
TBXG_002231	PWY-922	mevalonate pathway I
TBXG_002252	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
TBXG_002252	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
TBXG_002261	PWY-5651	L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
TBXG_002261	PWY-6309	L-tryptophan degradation XI (mammalian, via kynurenine)
TBXG_002262	PWY-1361	benzoyl-CoA degradation I (aerobic)
TBXG_002262	PWY-5109	2-methylbutanoate biosynthesis
TBXG_002262	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
TBXG_002262	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
TBXG_002262	PWY-5177	glutaryl-CoA degradation
TBXG_002262	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
TBXG_002262	PWY-6435	4-hydroxybenzoate biosynthesis V
TBXG_002262	PWY-6583	pyruvate fermentation to butanol I
TBXG_002262	PWY-6863	pyruvate fermentation to hexanol
TBXG_002262	PWY-6883	pyruvate fermentation to butanol II
TBXG_002262	PWY-6944	androstenedione degradation
TBXG_002262	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
TBXG_002262	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
TBXG_002262	PWY-7007	methyl ketone biosynthesis
TBXG_002262	PWY-7046	4-coumarate degradation (anaerobic)
TBXG_002262	PWY-7094	fatty acid salvage
TBXG_002262	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
TBXG_002262	PWY-735	jasmonic acid biosynthesis
TBXG_002262	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
TBXG_002265	PWY-7205	CMP phosphorylation
TBXG_002279	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
TBXG_002279	PWY-7177	UTP and CTP dephosphorylation II
TBXG_002279	PWY-7185	UTP and CTP dephosphorylation I
TBXG_002281	PWY-6898	thiamin salvage III
TBXG_002281	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
TBXG_002281	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
TBXG_002283	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
TBXG_002283	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
TBXG_002283	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
TBXG_002302	PWY-5350	thiosulfate disproportionation III (rhodanese)
TBXG_002316	PWY-4983	L-citrulline-nitric oxide cycle
TBXG_002316	PWY-4984	urea cycle
TBXG_002316	PWY-5	canavanine biosynthesis
TBXG_002316	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
TBXG_002316	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
TBXG_002317	PWY-4983	L-citrulline-nitric oxide cycle
TBXG_002317	PWY-4984	urea cycle
TBXG_002317	PWY-5	canavanine biosynthesis
TBXG_002317	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
TBXG_002317	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
TBXG_002319	PWY-4981	L-proline biosynthesis II (from arginine)
TBXG_002319	PWY-4984	urea cycle
TBXG_002319	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
TBXG_002321	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
TBXG_002321	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
TBXG_002322	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
TBXG_002323	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
TBXG_002323	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
TBXG_002349	PWY-4381	fatty acid biosynthesis initiation I
TBXG_002359	PWY-1042	glycolysis IV (plant cytosol)
TBXG_002359	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
TBXG_002359	PWY-5484	glycolysis II (from fructose 6-phosphate)
TBXG_002359	PWY-5723	Rubisco shunt
TBXG_002359	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
TBXG_002359	PWY-6886	1-butanol autotrophic biosynthesis
TBXG_002359	PWY-6901	superpathway of glucose and xylose degradation
TBXG_002359	PWY-7003	glycerol degradation to butanol
TBXG_002359	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
TBXG_002359	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
TBXG_002367	PWY-5958	acridone alkaloid biosynthesis
TBXG_002367	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
TBXG_002367	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
TBXG_002380	PWY-5316	nicotine biosynthesis
TBXG_002380	PWY-5381	pyridine nucleotide cycling (plants)
TBXG_002380	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
TBXG_002380	PWY-7342	superpathway of nicotine biosynthesis
TBXG_002381	PWY-5316	nicotine biosynthesis
TBXG_002381	PWY-7342	superpathway of nicotine biosynthesis
TBXG_002382	PWY-5316	nicotine biosynthesis
TBXG_002382	PWY-7342	superpathway of nicotine biosynthesis
TBXG_002384	PWY-6857	retinol biosynthesis
TBXG_002386	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
TBXG_002389	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
TBXG_002396	PWY-2661	trehalose biosynthesis V
TBXG_002397	PWY-2661	trehalose biosynthesis V
TBXG_002406	PWY-3781	aerobic respiration I (cytochrome c)
TBXG_002406	PWY-4302	aerobic respiration III (alternative oxidase pathway)
TBXG_002406	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
TBXG_002406	PWY-5690	TCA cycle II (plants and fungi)
TBXG_002406	PWY-6728	methylaspartate cycle
TBXG_002406	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
TBXG_002406	PWY-7254	TCA cycle VII (acetate-producers)
TBXG_002406	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
TBXG_002407	PWY-3781	aerobic respiration I (cytochrome c)
TBXG_002407	PWY-4302	aerobic respiration III (alternative oxidase pathway)
TBXG_002407	PWY-5392	reductive TCA cycle II
TBXG_002407	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
TBXG_002407	PWY-5690	TCA cycle II (plants and fungi)
TBXG_002407	PWY-5913	TCA cycle VI (obligate autotrophs)
TBXG_002407	PWY-6728	methylaspartate cycle
TBXG_002407	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
TBXG_002407	PWY-7254	TCA cycle VII (acetate-producers)
TBXG_002407	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
TBXG_002407	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
TBXG_002408	PWY-5667	CDP-diacylglycerol biosynthesis I
TBXG_002408	PWY-7411	superpathway of phosphatidate biosynthesis (yeast)
TBXG_002425	PWY-723	alkylnitronates degradation
TBXG_002432	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
TBXG_002432	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
TBXG_002432	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
TBXG_002432	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
TBXG_002434	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
TBXG_002434	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
TBXG_002434	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
TBXG_002434	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
TBXG_002445	PWY-66	GDP-L-fucose biosynthesis I (from GDP-D-mannose)
TBXG_002446	PWY-5738	GDP-6-deoxy-D-talose biosynthesis
TBXG_002446	PWY-5739	GDP-D-perosamine biosynthesis
TBXG_002446	PWY-5740	GDP-L-colitose biosynthesis
TBXG_002446	PWY-66	GDP-L-fucose biosynthesis I (from GDP-D-mannose)
TBXG_002448	PWY-5855	ubiquinol-7 biosynthesis (prokaryotic)
TBXG_002448	PWY-5856	ubiquinol-9 biosynthesis (prokaryotic)
TBXG_002448	PWY-5857	ubiquinol-10 biosynthesis (prokaryotic)
TBXG_002448	PWY-5870	ubiquinol-8 biosynthesis (eukaryotic)
TBXG_002448	PWY-5871	ubiquinol-9 biosynthesis (eukaryotic)
TBXG_002448	PWY-5872	ubiquinol-10 biosynthesis (eukaryotic)
TBXG_002448	PWY-5873	ubiquinol-7 biosynthesis (eukaryotic)
TBXG_002448	PWY-6708	ubiquinol-8 biosynthesis (prokaryotic)
TBXG_002448	PWY-7230	ubiquinol-6 biosynthesis from 4-aminobenzoate (eukaryotic)
TBXG_002448	PWY-7233	ubiquinol-6 bypass biosynthesis (eukaryotic)
TBXG_002466	PWY-5743	3-hydroxypropanoate cycle
TBXG_002466	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
TBXG_002466	PWY-6728	methylaspartate cycle
TBXG_002466	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
TBXG_002467	PWY-5743	3-hydroxypropanoate cycle
TBXG_002467	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
TBXG_002467	PWY-6728	methylaspartate cycle
TBXG_002467	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
TBXG_002470	PWY-5743	3-hydroxypropanoate cycle
TBXG_002470	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
TBXG_002470	PWY-6728	methylaspartate cycle
TBXG_002470	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
TBXG_002476	PWY-5971	palmitate biosynthesis II (bacteria and plants)
TBXG_002476	PWY-5973	<i>cis</i>-vaccenate biosynthesis
TBXG_002476	PWY-5989	stearate biosynthesis II (bacteria and plants)
TBXG_002476	PWY-6113	superpathway of mycolate biosynthesis
TBXG_002476	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
TBXG_002476	PWY-6519	8-amino-7-oxononanoate biosynthesis I
TBXG_002476	PWY-7096	triclosan resistance
TBXG_002476	PWYG-321	mycolate biosynthesis
TBXG_002497	PWY-6823	molybdenum cofactor biosynthesis
TBXG_002497	PWY-6891	thiazole biosynthesis II (Bacillus)
TBXG_002497	PWY-6892	thiazole biosynthesis I (E. coli)
TBXG_002497	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
TBXG_002512	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
TBXG_002512	PWY-5723	Rubisco shunt
TBXG_002512	PWY-6891	thiazole biosynthesis II (Bacillus)
TBXG_002512	PWY-6892	thiazole biosynthesis I (E. coli)
TBXG_002512	PWY-6901	superpathway of glucose and xylose degradation
TBXG_002512	PWY-7560	methylerythritol phosphate pathway II
TBXG_002513	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
TBXG_002513	PWY-5723	Rubisco shunt
TBXG_002514	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
TBXG_002516	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
TBXG_002516	PWY-6855	chitin degradation I (archaea)
TBXG_002516	PWY-6906	chitin derivatives degradation
TBXG_002523	PWY-1042	glycolysis IV (plant cytosol)
TBXG_002523	PWY-5484	glycolysis II (from fructose 6-phosphate)
TBXG_002523	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
TBXG_002523	PWY-7003	glycerol degradation to butanol
TBXG_002524	PWY-1042	glycolysis IV (plant cytosol)
TBXG_002524	PWY-5484	glycolysis II (from fructose 6-phosphate)
TBXG_002524	PWY-6886	1-butanol autotrophic biosynthesis
TBXG_002524	PWY-6901	superpathway of glucose and xylose degradation
TBXG_002524	PWY-7003	glycerol degradation to butanol
TBXG_002525	PWY-1042	glycolysis IV (plant cytosol)
TBXG_002525	PWY-5484	glycolysis II (from fructose 6-phosphate)
TBXG_002525	PWY-6901	superpathway of glucose and xylose degradation
TBXG_002525	PWY-7003	glycerol degradation to butanol
TBXG_002544	PWY-6167	flavin biosynthesis II (archaea)
TBXG_002544	PWY-6168	flavin biosynthesis III (fungi)
TBXG_002545	PWY-6167	flavin biosynthesis II (archaea)
TBXG_002545	PWY-6168	flavin biosynthesis III (fungi)
TBXG_002545	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
TBXG_002547	PWY-6167	flavin biosynthesis II (archaea)
TBXG_002547	PWY-6168	flavin biosynthesis III (fungi)
TBXG_002547	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
TBXG_002551	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
TBXG_002551	PWY-5723	Rubisco shunt
TBXG_002568	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
TBXG_002568	PWY-5912	2'-deoxymugineic acid phytosiderophore biosynthesis
TBXG_002571	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
TBXG_002575	PWY-5686	UMP biosynthesis
TBXG_002576	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
TBXG_002576	PWY-5686	UMP biosynthesis
TBXG_002576	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
TBXG_002577	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
TBXG_002577	PWY-5686	UMP biosynthesis
TBXG_002577	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
TBXG_002579	PWY-5686	UMP biosynthesis
TBXG_002580	PWY-5686	UMP biosynthesis
TBXG_002581	PWY-7183	pyrimidine nucleobases salvage I
TBXG_002617	PWY-7206	pyrimidine deoxyribonucleotides dephosphorylation
TBXG_002620	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
TBXG_002620	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
TBXG_002622	PWY-6936	seleno-amino acid biosynthesis
TBXG_002625	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
TBXG_002628	PWY-5381	pyridine nucleotide cycling (plants)
TBXG_002630	PWY-5941	glycogen degradation II (eukaryotic)
TBXG_002630	PWY-622	starch biosynthesis
TBXG_002630	PWY-6731	starch degradation III
TBXG_002630	PWY-6737	starch degradation V
TBXG_002630	PWY-7238	sucrose biosynthesis II
TBXG_002632	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
TBXG_002632	PWY-622	starch biosynthesis
TBXG_002637	PWY-5743	3-hydroxypropanoate cycle
TBXG_002637	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
TBXG_002637	PWY-6728	methylaspartate cycle
TBXG_002637	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
TBXG_002645	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
TBXG_002645	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
TBXG_002646	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
TBXG_002646	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
TBXG_002646	PWY-6268	adenosylcobalamin salvage from cobalamin
TBXG_002646	PWY-6269	adenosylcobalamin salvage from cobinamide II
TBXG_002650	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
TBXG_002652	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
TBXG_002658	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
TBXG_002658	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
TBXG_002658	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
TBXG_002663	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
TBXG_002664	PWY-702	L-methionine biosynthesis II
TBXG_002667	PWY-2941	L-lysine biosynthesis II
TBXG_002667	PWY-2942	L-lysine biosynthesis III
TBXG_002667	PWY-5097	L-lysine biosynthesis VI
TBXG_002675	PWY-5278	sulfite oxidation III
TBXG_002675	PWY-5340	sulfate activation for sulfonation
TBXG_002675	PWY-6683	sulfate reduction III (assimilatory)
TBXG_002675	PWY-6932	selenate reduction
TBXG_002676	PWY-5278	sulfite oxidation III
TBXG_002676	PWY-5340	sulfate activation for sulfonation
TBXG_002676	PWY-6683	sulfate reduction III (assimilatory)
TBXG_002676	PWY-6932	selenate reduction
TBXG_002677	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
TBXG_002677	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
TBXG_002677	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
TBXG_002677	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
TBXG_002682	PWY-3722	glycine betaine biosynthesis II (Gram-positive bacteria)
TBXG_002682	PWY-7494	choline degradation IV
TBXG_002698	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
TBXG_002704	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
TBXG_002704	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
TBXG_002713	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
TBXG_002721	PWY-1622	formaldehyde assimilation I (serine pathway)
TBXG_002721	PWY-5392	reductive TCA cycle II
TBXG_002721	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
TBXG_002721	PWY-5690	TCA cycle II (plants and fungi)
TBXG_002721	PWY-5913	TCA cycle VI (obligate autotrophs)
TBXG_002721	PWY-6728	methylaspartate cycle
TBXG_002721	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
TBXG_002721	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
TBXG_002721	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
TBXG_002746	PWY-6825	phosphatidylcholine biosynthesis V
TBXG_002749	PWY-622	starch biosynthesis
TBXG_002750	PWY-622	starch biosynthesis
TBXG_002755	PWY-6614	tetrahydrofolate biosynthesis
TBXG_002756	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
TBXG_002756	PWY-5143	long-chain fatty acid activation
TBXG_002756	PWY-5353	arachidonate biosynthesis I (lower eukaryotes)
TBXG_002756	PWY-5885	wax esters biosynthesis II
TBXG_002756	PWY-5972	stearate biosynthesis I (animals and fungi)
TBXG_002756	PWY-5995	linoleate biosynthesis I (plants)
TBXG_002756	PWY-6000	&gamma;-linolenate biosynthesis II (animals)
TBXG_002756	PWY-6001	linoleate biosynthesis II (animals)
TBXG_002756	PWY-6803	phosphatidylcholine acyl editing
TBXG_002756	PWY-6873	long chain fatty acid ester synthesis for microdiesel production
TBXG_002756	PWY-6920	6-gingerol analog biosynthesis
TBXG_002756	PWY-6951	TBXG_002756
TBXG_002756	PWY-7033	alkane biosynthesis II
TBXG_002756	PWY-7035	(<i>Z</i>)-9-tricosene biosynthesis
TBXG_002756	PWY-7049	icosapentaenoate biosynthesis II (metazoa)
TBXG_002756	PWY-7053	docosahexaenoate biosynthesis I (lower eukaryotes)
TBXG_002756	PWY-7094	fatty acid salvage
TBXG_002756	PWY-7288	fatty acid &beta;-oxidation (peroxisome, yeast)
TBXG_002774	PWY-5737	(5<i>R</i>)-carbapenem carboxylate biosynthesis
TBXG_002774	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
TBXG_002775	PWY-6853	ethylene biosynthesis II (microbes)
TBXG_002788	PWY-5198	factor 420 biosynthesis
TBXG_002802	PWY-7158	L-phenylalanine degradation V
TBXG_002807	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
TBXG_002807	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
TBXG_002836	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
TBXG_002836	PWY-6549	L-glutamine biosynthesis III
TBXG_002836	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
TBXG_002836	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
TBXG_002842	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
TBXG_002853	PWY-7560	methylerythritol phosphate pathway II
TBXG_002865	PWY-5484	glycolysis II (from fructose 6-phosphate)
TBXG_002866	PWY-5392	reductive TCA cycle II
TBXG_002866	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
TBXG_002866	PWY-5690	TCA cycle II (plants and fungi)
TBXG_002866	PWY-5913	TCA cycle VI (obligate autotrophs)
TBXG_002866	PWY-6728	methylaspartate cycle
TBXG_002866	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
TBXG_002866	PWY-7254	TCA cycle VII (acetate-producers)
TBXG_002866	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
TBXG_002870	PWY-5147	oleate biosynthesis I (plants)
TBXG_002871	PWY-1622	formaldehyde assimilation I (serine pathway)
TBXG_002871	PWY-181	photorespiration
TBXG_002871	PWY-2161	folate polyglutamylation
TBXG_002871	PWY-2201	folate transformations I
TBXG_002871	PWY-3661	glycine betaine degradation I
TBXG_002871	PWY-3661-1	glycine betaine degradation II (mammalian)
TBXG_002871	PWY-3841	folate transformations II
TBXG_002871	PWY-5497	purine nucleobases degradation II (anaerobic)
TBXG_002872	PWY-3961	phosphopantothenate biosynthesis II
TBXG_002874	PWY-6784	cellulose and hemicellulose degradation (cellulolosome)
TBXG_002890	PWY-801	L-homocysteine and L-cysteine interconversion
TBXG_002901	PWY-5331	taurine biosynthesis
TBXG_002907	PWY-2941	L-lysine biosynthesis II
TBXG_002907	PWY-2942	L-lysine biosynthesis III
TBXG_002907	PWY-5097	L-lysine biosynthesis VI
TBXG_002944	PWY-1042	glycolysis IV (plant cytosol)
TBXG_002944	PWY-1622	formaldehyde assimilation I (serine pathway)
TBXG_002944	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
TBXG_002944	PWY-5484	glycolysis II (from fructose 6-phosphate)
TBXG_002944	PWY-5723	Rubisco shunt
TBXG_002944	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
TBXG_002944	PWY-6886	1-butanol autotrophic biosynthesis
TBXG_002944	PWY-6901	superpathway of glucose and xylose degradation
TBXG_002944	PWY-7003	glycerol degradation to butanol
TBXG_002944	PWY-7124	ethylene biosynthesis V (engineered)
TBXG_002944	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
TBXG_002949	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
TBXG_002956	PWY-7560	methylerythritol phosphate pathway II
TBXG_002962	PWY-5958	acridone alkaloid biosynthesis
TBXG_002962	PWY-6543	4-aminobenzoate biosynthesis
TBXG_002962	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
TBXG_002962	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
TBXG_002962	PWY-6722	candicidin biosynthesis
TBXG_002966	PWY-4981	L-proline biosynthesis II (from arginine)
TBXG_002974	PWY-6823	molybdenum cofactor biosynthesis
TBXG_002994	PWY-4381	fatty acid biosynthesis initiation I
TBXG_002994	PWY-5743	3-hydroxypropanoate cycle
TBXG_002994	PWY-5744	glyoxylate assimilation
TBXG_002994	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
TBXG_002994	PWY-6679	jadomycin biosynthesis
TBXG_002994	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
TBXG_003012	PWY-6123	inosine-5'-phosphate biosynthesis I
TBXG_003012	PWY-6124	inosine-5'-phosphate biosynthesis II
TBXG_003012	PWY-7234	inosine-5'-phosphate biosynthesis III
TBXG_003013	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
TBXG_003013	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
TBXG_003017	PWY-5392	reductive TCA cycle II
TBXG_003017	PWY-5537	pyruvate fermentation to acetate V
TBXG_003017	PWY-5538	pyruvate fermentation to acetate VI
TBXG_003017	PWY-5690	TCA cycle II (plants and fungi)
TBXG_003017	PWY-5913	TCA cycle VI (obligate autotrophs)
TBXG_003017	PWY-6728	methylaspartate cycle
TBXG_003017	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
TBXG_003017	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
TBXG_003018	PWY-5392	reductive TCA cycle II
TBXG_003018	PWY-5537	pyruvate fermentation to acetate V
TBXG_003018	PWY-5538	pyruvate fermentation to acetate VI
TBXG_003018	PWY-5690	TCA cycle II (plants and fungi)
TBXG_003018	PWY-5913	TCA cycle VI (obligate autotrophs)
TBXG_003018	PWY-6728	methylaspartate cycle
TBXG_003018	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
TBXG_003018	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
TBXG_003021	PWY-3461	L-tyrosine biosynthesis II
TBXG_003021	PWY-3462	L-phenylalanine biosynthesis II
TBXG_003021	PWY-6120	L-tyrosine biosynthesis III
TBXG_003021	PWY-6627	salinosporamide A biosynthesis
TBXG_003024	PWY-3801	sucrose degradation II (sucrose synthase)
TBXG_003024	PWY-5054	sorbitol biosynthesis I
TBXG_003024	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
TBXG_003024	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
TBXG_003024	PWY-5659	GDP-mannose biosynthesis
TBXG_003024	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
TBXG_003024	PWY-621	sucrose degradation III (sucrose invertase)
TBXG_003024	PWY-622	starch biosynthesis
TBXG_003024	PWY-6531	mannitol cycle
TBXG_003024	PWY-6981	chitin biosynthesis
TBXG_003024	PWY-7238	sucrose biosynthesis II
TBXG_003024	PWY-7347	sucrose biosynthesis III
TBXG_003024	PWY-7385	1,3-propanediol biosynthesis (engineered)
TBXG_003043	PWY-2941	L-lysine biosynthesis II
TBXG_003043	PWY-2942	L-lysine biosynthesis III
TBXG_003043	PWY-5097	L-lysine biosynthesis VI
TBXG_003045	PWY-4041	&gamma;-glutamyl cycle
TBXG_003064	PWY-4381	fatty acid biosynthesis initiation I
TBXG_003064	PWY-5743	3-hydroxypropanoate cycle
TBXG_003064	PWY-5744	glyoxylate assimilation
TBXG_003064	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
TBXG_003064	PWY-6679	jadomycin biosynthesis
TBXG_003064	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
TBXG_003100	PWY-6823	molybdenum cofactor biosynthesis
TBXG_003103	PWY-6823	molybdenum cofactor biosynthesis
TBXG_003109	PWY-1361	benzoyl-CoA degradation I (aerobic)
TBXG_003109	PWY-5109	2-methylbutanoate biosynthesis
TBXG_003109	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
TBXG_003109	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
TBXG_003109	PWY-5177	glutaryl-CoA degradation
TBXG_003109	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
TBXG_003109	PWY-6435	4-hydroxybenzoate biosynthesis V
TBXG_003109	PWY-6583	pyruvate fermentation to butanol I
TBXG_003109	PWY-6863	pyruvate fermentation to hexanol
TBXG_003109	PWY-6883	pyruvate fermentation to butanol II
TBXG_003109	PWY-6944	androstenedione degradation
TBXG_003109	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
TBXG_003109	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
TBXG_003109	PWY-7007	methyl ketone biosynthesis
TBXG_003109	PWY-7046	4-coumarate degradation (anaerobic)
TBXG_003109	PWY-7094	fatty acid salvage
TBXG_003109	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
TBXG_003109	PWY-735	jasmonic acid biosynthesis
TBXG_003109	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
TBXG_003130	PWY-6454	vancomycin resistance I
TBXG_003130	PWY-6455	vancomycin resistance II
TBXG_003139	PWY-5350	thiosulfate disproportionation III (rhodanese)
TBXG_003141	PWY-6823	molybdenum cofactor biosynthesis
TBXG_003156	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
TBXG_003156	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
TBXG_003156	PWY-6268	adenosylcobalamin salvage from cobalamin
TBXG_003156	PWY-6269	adenosylcobalamin salvage from cobinamide II
TBXG_003198	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
TBXG_003222	PWY-5381	pyridine nucleotide cycling (plants)
TBXG_003241	PWY-5791	1,4-dihydroxy-2-naphthoate biosynthesis II (plants)
TBXG_003241	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
TBXG_003241	PWY-5901	2,3-dihydroxybenzoate biosynthesis
TBXG_003241	PWY-6406	salicylate biosynthesis I
TBXG_003244	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
TBXG_003244	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
TBXG_003244	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
TBXG_003256	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
TBXG_003275	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
TBXG_003275	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
TBXG_003275	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
TBXG_003275	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
TBXG_003275	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
TBXG_003275	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
TBXG_003276	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
TBXG_003283	PWY-3861	mannitol degradation II
TBXG_003283	PWY-3881	mannitol biosynthesis
TBXG_003283	PWY-5659	GDP-mannose biosynthesis
TBXG_003283	PWY-7456	mannan degradation
TBXG_003283	PWY-882	L-ascorbate biosynthesis I (L-galactose pathway)
TBXG_003285	PWY-6749	CMP-legionaminate biosynthesis I
TBXG_003289	PWY-5198	factor 420 biosynthesis
TBXG_003290	PWY-5199	factor 420 polyglutamylation
TBXG_003301	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
TBXG_003301	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
TBXG_003301	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
TBXG_003301	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
TBXG_003303	PWY-6123	inosine-5'-phosphate biosynthesis I
TBXG_003303	PWY-7234	inosine-5'-phosphate biosynthesis III
TBXG_003307	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
TBXG_003307	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
TBXG_003308	PWY-4381	fatty acid biosynthesis initiation I
TBXG_003308	PWY-5743	3-hydroxypropanoate cycle
TBXG_003308	PWY-5744	glyoxylate assimilation
TBXG_003308	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
TBXG_003308	PWY-6679	jadomycin biosynthesis
TBXG_003308	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
TBXG_003311	PWY-5350	thiosulfate disproportionation III (rhodanese)
TBXG_003318	PWY-5298	L-lysine degradation VI
TBXG_003330	PWY-4261	glycerol degradation I
TBXG_003330	PWY-6118	glycerol-3-phosphate shuttle
TBXG_003330	PWY-6952	glycerophosphodiester degradation
TBXG_003332	PWY-4041	&gamma;-glutamyl cycle
TBXG_003335	PWY-4202	arsenate detoxification I (glutaredoxin)
TBXG_003335	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
TBXG_003335	PWY-6608	guanosine nucleotides degradation III
TBXG_003335	PWY-6609	adenine and adenosine salvage III
TBXG_003335	PWY-6611	adenine and adenosine salvage V
TBXG_003335	PWY-6620	guanine and guanosine salvage
TBXG_003335	PWY-6627	salinosporamide A biosynthesis
TBXG_003335	PWY-6644	fluoroacetate and fluorothreonine biosynthesis
TBXG_003335	PWY-7179	purine deoxyribonucleosides degradation I
TBXG_003335	PWY-7179-1	purine deoxyribonucleosides degradation
TBXG_003336	PWY-6749	CMP-legionaminate biosynthesis I
TBXG_003337	PWY-7183	pyrimidine nucleobases salvage I
TBXG_003342	PWY-6609	adenine and adenosine salvage III
TBXG_003342	PWY-6611	adenine and adenosine salvage V
TBXG_003342	PWY-7179	purine deoxyribonucleosides degradation I
TBXG_003342	PWY-7179-1	purine deoxyribonucleosides degradation
TBXG_003343	PWY-7181	pyrimidine deoxyribonucleosides degradation
TBXG_003347	PWY-3781	aerobic respiration I (cytochrome c)
TBXG_003347	PWY-4302	aerobic respiration III (alternative oxidase pathway)
TBXG_003347	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
TBXG_003347	PWY-5690	TCA cycle II (plants and fungi)
TBXG_003347	PWY-6728	methylaspartate cycle
TBXG_003347	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
TBXG_003347	PWY-7254	TCA cycle VII (acetate-producers)
TBXG_003347	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
TBXG_003348	PWY-3781	aerobic respiration I (cytochrome c)
TBXG_003348	PWY-4302	aerobic respiration III (alternative oxidase pathway)
TBXG_003348	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
TBXG_003348	PWY-5690	TCA cycle II (plants and fungi)
TBXG_003348	PWY-6728	methylaspartate cycle
TBXG_003348	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
TBXG_003348	PWY-7254	TCA cycle VII (acetate-producers)
TBXG_003348	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
TBXG_003352	PWY-6823	molybdenum cofactor biosynthesis
TBXG_003354	PWY-7158	L-phenylalanine degradation V
TBXG_003361	PWY-6906	chitin derivatives degradation
TBXG_003361	PWY-7077	<i>N</i>-acetyl-D-galactosamine degradation
TBXG_003361	PWY-7395	D-galactosamine and <i>N</i>-acetyl-D-galactosamine degradation
TBXG_003368	PWY-5913	TCA cycle VI (obligate autotrophs)
TBXG_003368	PWY-6549	L-glutamine biosynthesis III
TBXG_003368	PWY-6728	methylaspartate cycle
TBXG_003368	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
TBXG_003368	PWY-7124	ethylene biosynthesis V (engineered)
TBXG_003368	PWY-7254	TCA cycle VII (acetate-producers)
TBXG_003368	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
TBXG_003369	PWY-5344	L-homocysteine biosynthesis
TBXG_003369	PWY-7174	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation II
TBXG_003370	PWY-5344	L-homocysteine biosynthesis
TBXG_003384	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
TBXG_003384	PWY-2201	folate transformations I
TBXG_003384	PWY-3841	folate transformations II
TBXG_003384	PWY-5030	L-histidine degradation III
TBXG_003384	PWY-5497	purine nucleobases degradation II (anaerobic)
TBXG_003384	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
TBXG_003398	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
TBXG_003398	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
TBXG_003403	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
TBXG_003407	PWY-6891	thiazole biosynthesis II (Bacillus)
TBXG_003407	PWY-6892	thiazole biosynthesis I (E. coli)
TBXG_003407	PWY-7560	methylerythritol phosphate pathway II
TBXG_003408	PWY-7560	methylerythritol phosphate pathway II
TBXG_003422	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
TBXG_003437	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
TBXG_003437	PWY-6596	adenosine nucleotides degradation I
TBXG_003437	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
TBXG_003448	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
TBXG_003454	PWY-4321	L-glutamate degradation IV
TBXG_003455	PWY-6938	NADH repair
TBXG_003458	PWY-6749	CMP-legionaminate biosynthesis I
TBXG_003463	PWY-6749	CMP-legionaminate biosynthesis I
TBXG_003484	PWY-3221	dTDP-L-rhamnose biosynthesis II
TBXG_003484	PWY-6808	dTDP-D-forosamine biosynthesis
TBXG_003484	PWY-6942	dTDP-D-desosamine biosynthesis
TBXG_003484	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
TBXG_003484	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
TBXG_003484	PWY-6974	dTDP-L-olivose biosynthesis
TBXG_003484	PWY-6976	dTDP-L-mycarose biosynthesis
TBXG_003484	PWY-7104	dTDP-L-megosamine biosynthesis
TBXG_003484	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
TBXG_003484	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
TBXG_003484	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
TBXG_003484	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
TBXG_003484	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
TBXG_003484	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
TBXG_003484	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
TBXG_003484	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
TBXG_003488	PWY-5162	2-oxopentenoate degradation
TBXG_003522	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
TBXG_003522	PWY-5143	long-chain fatty acid activation
TBXG_003522	PWY-5353	arachidonate biosynthesis I (lower eukaryotes)
TBXG_003522	PWY-5885	wax esters biosynthesis II
TBXG_003522	PWY-5972	stearate biosynthesis I (animals and fungi)
TBXG_003522	PWY-5995	linoleate biosynthesis I (plants)
TBXG_003522	PWY-6000	&gamma;-linolenate biosynthesis II (animals)
TBXG_003522	PWY-6001	linoleate biosynthesis II (animals)
TBXG_003522	PWY-6803	phosphatidylcholine acyl editing
TBXG_003522	PWY-6873	long chain fatty acid ester synthesis for microdiesel production
TBXG_003522	PWY-6920	6-gingerol analog biosynthesis
TBXG_003522	PWY-6951	TBXG_003522
TBXG_003522	PWY-7033	alkane biosynthesis II
TBXG_003522	PWY-7035	(<i>Z</i>)-9-tricosene biosynthesis
TBXG_003522	PWY-7049	icosapentaenoate biosynthesis II (metazoa)
TBXG_003522	PWY-7053	docosahexaenoate biosynthesis I (lower eukaryotes)
TBXG_003522	PWY-7094	fatty acid salvage
TBXG_003522	PWY-7288	fatty acid &beta;-oxidation (peroxisome, yeast)
TBXG_003534	PWY-5451	acetone degradation I (to methylglyoxal)
TBXG_003534	PWY-6588	pyruvate fermentation to acetone
TBXG_003534	PWY-6876	isopropanol biosynthesis
TBXG_003534	PWY-7466	acetone degradation III (to propane-1,2-diol)
TBXG_003549	PWY-5162	2-oxopentenoate degradation
TBXG_003550	PWY-5162	2-oxopentenoate degradation
TBXG_003550	PWY-5436	L-threonine degradation IV
TBXG_003550	PWY-5480	pyruvate fermentation to ethanol I
TBXG_003550	PWY-6587	pyruvate fermentation to ethanol III
TBXG_003550	PWY-7085	triethylamine degradation
TBXG_003550	PWY-7180	2'-deoxy-&alpha;-D-ribose 1-phosphate degradation
TBXG_003568	PWY-723	alkylnitronates degradation
TBXG_003580	PWY-7153	grixazone biosynthesis
TBXG_003595	PWY-7560	methylerythritol phosphate pathway II
TBXG_003596	PWY-7560	methylerythritol phosphate pathway II
TBXG_003602	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
TBXG_003602	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
TBXG_003602	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
TBXG_003602	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
TBXG_003612	PWY-3961	phosphopantothenate biosynthesis II
TBXG_003613	PWY-5155	&beta;-alanine biosynthesis III
TBXG_003618	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
TBXG_003618	PWY-6148	tetrahydromethanopterin biosynthesis
TBXG_003618	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
TBXG_003618	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
TBXG_003619	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
TBXG_003619	PWY-6148	tetrahydromethanopterin biosynthesis
TBXG_003619	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
TBXG_003619	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
TBXG_003620	PWY-6614	tetrahydrofolate biosynthesis
TBXG_003621	PWY-5663	tetrahydrobiopterin biosynthesis I
TBXG_003621	PWY-5664	tetrahydrobiopterin biosynthesis II
TBXG_003621	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
TBXG_003621	PWY-6703	preQ<sub>0</sub> biosynthesis
TBXG_003621	PWY-6983	tetrahydrobiopterin biosynthesis III
TBXG_003621	PWY-7442	drosopterin and aurodrosopterin biosynthesis
TBXG_003633	PWY-6599	guanine and guanosine salvage II
TBXG_003633	PWY-6609	adenine and adenosine salvage III
TBXG_003633	PWY-6610	adenine and adenosine salvage IV
TBXG_003633	PWY-6620	guanine and guanosine salvage
TBXG_003636	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
TBXG_003636	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
TBXG_003680	PWY-6672	<i>cis</i>-genanyl-CoA degradation
TBXG_003680	PWY-7118	chitin degradation to ethanol
TBXG_003709	PWY-4261	glycerol degradation I
TBXG_003718	PWY-6840	homoglutathione biosynthesis
TBXG_003718	PWY-7255	ergothioneine biosynthesis I (bacteria)
TBXG_003723	PWY-2941	L-lysine biosynthesis II
TBXG_003723	PWY-2942	L-lysine biosynthesis III
TBXG_003723	PWY-5097	L-lysine biosynthesis VI
TBXG_003723	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
TBXG_003723	PWY-6559	spermidine biosynthesis II
TBXG_003723	PWY-6562	norspermidine biosynthesis
TBXG_003723	PWY-7153	grixazone biosynthesis
TBXG_003723	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
TBXG_003724	PWY-2941	L-lysine biosynthesis II
TBXG_003724	PWY-2942	L-lysine biosynthesis III
TBXG_003724	PWY-5097	L-lysine biosynthesis VI
TBXG_003724	PWY-6559	spermidine biosynthesis II
TBXG_003724	PWY-6562	norspermidine biosynthesis
TBXG_003724	PWY-7153	grixazone biosynthesis
TBXG_003725	PWY-6871	3-methylbutanol biosynthesis
TBXG_003734	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
TBXG_003734	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
TBXG_003807	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
TBXG_003807	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
TBXG_003816	PWY-4381	fatty acid biosynthesis initiation I
TBXG_003816	PWY-5743	3-hydroxypropanoate cycle
TBXG_003816	PWY-5744	glyoxylate assimilation
TBXG_003816	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
TBXG_003816	PWY-6679	jadomycin biosynthesis
TBXG_003816	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
TBXG_003826	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
TBXG_003826	PWY-7328	superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
TBXG_003851	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
TBXG_003855	PWY-7432	L-phenylalanine biosynthesis III (cytosolic, plants)
TBXG_003866	PWY-6854	ethylene biosynthesis III (microbes)
TBXG_003965	PWY-6317	galactose degradation I (Leloir pathway)
TBXG_003965	PWY-6527	stachyose degradation
TBXG_003988	PWY-3341	L-proline biosynthesis III
TBXG_003988	PWY-4981	L-proline biosynthesis II (from arginine)
TBXG_003988	PWY-6344	L-ornithine degradation II (Stickland reaction)
TBXG_003988	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
TBXG_004002	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
TBXG_004003	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
TBXG_004012	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
TBXG_004041	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
TBXG_004041	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
