MCJ_000010	SSF48295	TrpR-like
MCJ_000010	SSF52540	P-loop containing nucleoside triphosphate hydrolases
MCJ_000020	SSF55979	DNA clamp
MCJ_000030	SSF55174	Alpha-L RNA-binding motif
MCJ_000040	SSF51905	FAD/NAD(P)-binding domain
MCJ_000050	SSF75217	alpha/beta knot
MCJ_000060	SSF64182	DHH phosphoesterases
MCJ_000070	SSF64182	DHH phosphoesterases
MCJ_000080	SSF48168	R1 subunit of ribonucleotide reductase, N-terminal domain
MCJ_000080	SSF51998	PFL-like glycyl radical enzymes
MCJ_000090	SSF52218	Flavoproteins
MCJ_000100	SSF47240	Ferritin-like
MCJ_000150	SSF50199	Staphylococcal nuclease
MCJ_000160	SSF50331	MOP-like
MCJ_000160	SSF52540	P-loop containing nucleoside triphosphate hydrolases
MCJ_000170	SSF161098	MetI-like
MCJ_000180	SSF161098	MetI-like
MCJ_000200	SSF51905	FAD/NAD(P)-binding domain
MCJ_000230	SSF53067	Actin-like ATPase domain
MCJ_000240	SSF81338	Aquaporin-like
MCJ_000260	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
MCJ_000270	SSF53271	PRTase-like
MCJ_000280	SSF51556	Metallo-dependent hydrolases
MCJ_000290	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
MCJ_000300	SSF52161	Ribosomal protein L13
MCJ_000310	SSF54211	Ribosomal protein S5 domain 2-like
MCJ_000330	SSF55821	YrdC/RibB
MCJ_000340	SSF46600	C-terminal UvrC-binding domain of UvrB
MCJ_000340	SSF52540	P-loop containing nucleoside triphosphate hydrolases
MCJ_000350	SSF52058	L domain-like
MCJ_000370	SSF52540	P-loop containing nucleoside triphosphate hydrolases
MCJ_000410	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
MCJ_000420	SSF53187	Zn-dependent exopeptidases
MCJ_000450	SSF52540	P-loop containing nucleoside triphosphate hydrolases
MCJ_000460	SSF161098	MetI-like
MCJ_000470	SSF48019	post-AAA+ oligomerization domain-like
MCJ_000500	SSF118352	HSP33 redox switch-like
MCJ_000500	SSF142433	CinA-like
MCJ_000500	SSF64397	Hsp33 domain
MCJ_000510	SSF102735	Trigger factor ribosome-binding domain
MCJ_000510	SSF109998	Triger factor/SurA peptide-binding domain-like
MCJ_000510	SSF54534	FKBP-like
MCJ_000540	SSF101904	GyrA/ParC C-terminal domain-like
MCJ_000540	SSF56719	Type II DNA topoisomerase
MCJ_000550	SSF54211	Ribosomal protein S5 domain 2-like
MCJ_000550	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
MCJ_000550	SSF56719	Type II DNA topoisomerase
MCJ_000590	SSF140478	LemA-like
MCJ_000640	SSF52954	Class II aaRS ABD-related
MCJ_000640	SSF55681	Class II aaRS and biotin synthetases
MCJ_000640	SSF64586	C-terminal domain of ProRS
MCJ_000650	SSF52833	Thioredoxin-like
MCJ_000670	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
MCJ_000680	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
MCJ_000680	SSF52922	TK C-terminal domain-like
MCJ_000690	SSF52777	CoA-dependent acyltransferases
MCJ_000700	SSF51230	Single hybrid motif
MCJ_000700	SSF51905	FAD/NAD(P)-binding domain
MCJ_000700	SSF55424	FAD/NAD-linked reductases, dimerisation (C-terminal) domain
MCJ_000740	SSF52540	P-loop containing nucleoside triphosphate hydrolases
MCJ_000760	SSF52540	P-loop containing nucleoside triphosphate hydrolases
MCJ_000800	SSF50494	Trypsin-like serine proteases
MCJ_000840	SSF52540	P-loop containing nucleoside triphosphate hydrolases
MCJ_000850	SSF51351	Triosephosphate isomerase (TIM)
MCJ_000860	SSF47060	S15/NS1 RNA-binding domain
MCJ_000870	SSF53167	Purine and uridine phosphorylases
MCJ_000880	SSF109604	HD-domain/PDEase-like
MCJ_000880	SSF52374	Nucleotidylyl transferase
MCJ_000890	SSF56784	HAD-like
MCJ_000910	SSF53659	Isocitrate/Isopropylmalate dehydrogenase-like
MCJ_000920	SSF53067	Actin-like ATPase domain
MCJ_000930	SSF52374	Nucleotidylyl transferase
MCJ_000940	SSF52540	P-loop containing nucleoside triphosphate hydrolases
MCJ_000950	SSF116734	DNA methylase specificity domain
MCJ_000980	SSF53098	Ribonuclease H-like
MCJ_001000	SSF51735	NAD(P)-binding Rossmann-fold domains
MCJ_001000	SSF56327	LDH C-terminal domain-like
MCJ_001010	SSF52402	Adenine nucleotide alpha hydrolases-like
MCJ_001030	SSF51366	Ribulose-phoshate binding barrel
MCJ_001070	SSF55804	Phoshotransferase/anion transport protein
MCJ_001080	SSF52794	PTS system IIB component-like
MCJ_001100	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
MCJ_001100	SSF52922	TK C-terminal domain-like
MCJ_001110	SSF52374	Nucleotidylyl transferase
MCJ_001110	SSF55174	Alpha-L RNA-binding motif
MCJ_001120	SSF55068	Peptide methionine sulfoxide reductase
MCJ_001130	SSF51658	Xylose isomerase-like
MCJ_001140	SSF102705	NIF3 (NGG1p interacting factor 3)-like
MCJ_001150	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
MCJ_001150	SSF88946	Sigma2 domain of RNA polymerase sigma factors
MCJ_001160	SSF56731	DNA primase core
MCJ_001160	SSF57783	Zinc beta-ribbon
MCJ_001170	SSF52954	Class II aaRS ABD-related
MCJ_001170	SSF55681	Class II aaRS and biotin synthetases
MCJ_001180	SSF47364	Domain of the SRP/SRP receptor G-proteins
MCJ_001180	SSF47446	Signal peptide-binding domain
MCJ_001180	SSF52540	P-loop containing nucleoside triphosphate hydrolases
MCJ_001190	SSF46934	UBA-like
MCJ_001190	SSF54713	Elongation factor Ts (EF-Ts), dimerisation domain
MCJ_001200	SSF52313	Ribosomal protein S2
MCJ_001210	SSF52980	Restriction endonuclease-like
MCJ_001220	SSF56214	4'-phosphopantetheinyl transferase
MCJ_001230	SSF69593	Glycerol-3-phosphate (1)-acyltransferase
MCJ_001250	SSF46785	"Winged helix" DNA-binding domain
MCJ_001270	SSF53067	Actin-like ATPase domain
MCJ_001280	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
MCJ_001300	SSF54999	Ribosomal protein S10
MCJ_001310	SSF50447	Translation proteins
MCJ_001320	SSF52166	Ribosomal protein L4
MCJ_001330	SSF54189	Ribosomal proteins S24e, L23 and L15e
MCJ_001340	SSF50104	Translation proteins SH3-like domain
MCJ_001340	SSF50249	Nucleic acid-binding proteins
MCJ_001350	SSF54570	Ribosomal protein S19
MCJ_001360	SSF54843	Ribosomal protein L22
MCJ_001370	SSF54814	Prokaryotic type KH domain (KH-domain type II)
MCJ_001370	SSF54821	Ribosomal protein S3 C-terminal domain
MCJ_001380	SSF54686	Ribosomal protein L16p/L10e
MCJ_001390	SSF46561	Ribosomal protein L29 (L29p)
MCJ_001400	SSF50249	Nucleic acid-binding proteins
MCJ_001410	SSF50193	Ribosomal protein L14
MCJ_001420	SSF50104	Translation proteins SH3-like domain
MCJ_001430	SSF55282	RL5-like
MCJ_001430a	SSF57716	Glucocorticoid receptor-like (DNA-binding domain)
MCJ_001440	SSF56047	Ribosomal protein S8
MCJ_001450	SSF56053	Ribosomal protein L6
MCJ_001460	SSF53137	Translational machinery components
MCJ_001470	SSF54211	Ribosomal protein S5 domain 2-like
MCJ_001470	SSF54768	dsRNA-binding domain-like
MCJ_001480	SSF52080	Ribosomal proteins L15p and L18e
MCJ_001490	SSF103491	Preprotein translocase SecY subunit
MCJ_001500	SSF52540	P-loop containing nucleoside triphosphate hydrolases
MCJ_001500	SSF57774	Microbial and mitochondrial ADK, insert "zinc finger" domain
MCJ_001510	SSF55920	Creatinase/aminopeptidase
MCJ_001520	SSF50249	Nucleic acid-binding proteins
MCJ_001530	SSF46946	S13-like H2TH domain
MCJ_001540	SSF53137	Translational machinery components
MCJ_001550	SSF47789	C-terminal domain of RNA polymerase alpha subunit
MCJ_001550	SSF55257	RBP11-like subunits of RNA polymerase
MCJ_001550	SSF56553	Insert subdomain of RNA polymerase alpha subunit
MCJ_001560	SSF64263	Prokaryotic ribosomal protein L17
MCJ_001570	SSF56219	DNase I-like
MCJ_001580	SSF46785	"Winged helix" DNA-binding domain
MCJ_001580	SSF55781	GAF domain-like
MCJ_001590	SSF51064	Head domain of nucleotide exchange factor GrpE
MCJ_001590	SSF58014	Coiled-coil domain of nucleotide exchange factor GrpE
MCJ_001600	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
MCJ_001600	SSF52374	Nucleotidylyl transferase
MCJ_001600	SSF55190	Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain
MCJ_001620	SSF51569	Aldolase
MCJ_001630	SSF55120	Pseudouridine synthase
MCJ_001640	SSF141000	Glu-tRNAGln amidotransferase C subunit
MCJ_001650	SSF75304	Amidase signature (AS) enzymes
MCJ_001660	SSF55931	Glutamine synthetase/guanido kinase
MCJ_001660	SSF89095	GatB/YqeY motif
MCJ_001670	SSF116734	DNA methylase specificity domain
MCJ_001680	SSF116734	DNA methylase specificity domain
MCJ_001690	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
MCJ_001690	SSF50677	ValRS/IleRS/LeuRS editing domain
MCJ_001690	SSF52374	Nucleotidylyl transferase
MCJ_001700	SSF64182	DHH phosphoesterases
MCJ_001710	SSF55653	Ribosomal protein L9 C-domain
MCJ_001710	SSF55658	L9 N-domain-like
MCJ_001720	SSF48024	N-terminal domain of DnaB helicase
MCJ_001720	SSF52540	P-loop containing nucleoside triphosphate hydrolases
MCJ_001730	SSF54631	CBS-domain pair
MCJ_001750	SSF52374	Nucleotidylyl transferase
MCJ_001760	SSF55315	L30e-like
MCJ_001760	SSF75217	alpha/beta knot
MCJ_001770	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
MCJ_001790	SSF50104	Translation proteins SH3-like domain
MCJ_001790	SSF82679	N-utilization substance G protein NusG, N-terminal domain
MCJ_001810	SSF52540	P-loop containing nucleoside triphosphate hydrolases
MCJ_001860	SSF110324	Ribosomal L27 protein-like
MCJ_001870	SSF141091	L21p-like
MCJ_001880	SSF52141	Uracil-DNA glycosylase-like
MCJ_001890	SSF101821	Aminopeptidase/glucanase lid domain
MCJ_001890	SSF53187	Zn-dependent exopeptidases
MCJ_001920	SSF50800	PK beta-barrel domain-like
MCJ_001920	SSF51621	Phosphoenolpyruvate/pyruvate domain
MCJ_001920	SSF52935	PK C-terminal domain-like
MCJ_001940	SSF55594	HPr-like
MCJ_001950	SSF51261	Duplicated hybrid motif
MCJ_001950	SSF55604	Glucose permease domain IIB
MCJ_002040	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
MCJ_002050	SSF53098	Ribonuclease H-like
MCJ_002080	SSF50249	Nucleic acid-binding proteins
MCJ_002090	SSF47973	Ribosomal protein S7
MCJ_002100	SSF50447	Translation proteins
MCJ_002100	SSF52540	P-loop containing nucleoside triphosphate hydrolases
MCJ_002100	SSF54211	Ribosomal protein S5 domain 2-like
MCJ_002100	SSF54980	EF-G C-terminal domain-like
MCJ_002130	SSF53098	Ribonuclease H-like
MCJ_002230	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
MCJ_002240	SSF52540	P-loop containing nucleoside triphosphate hydrolases
MCJ_002310	SSF52540	P-loop containing nucleoside triphosphate hydrolases
MCJ_002320	SSF52540	P-loop containing nucleoside triphosphate hydrolases
MCJ_002330	SSF47729	IHF-like DNA-binding proteins
MCJ_002350	SSF50447	Translation proteins
MCJ_002350	SSF52540	P-loop containing nucleoside triphosphate hydrolases
MCJ_002350	SSF54980	EF-G C-terminal domain-like
MCJ_002380	SSF161098	MetI-like
MCJ_002390	SSF161098	MetI-like
MCJ_002400	SSF52540	P-loop containing nucleoside triphosphate hydrolases
MCJ_002410	SSF52540	P-loop containing nucleoside triphosphate hydrolases
MCJ_002470	SSF56112	Protein kinase-like (PK-like)
MCJ_002480	SSF52540	P-loop containing nucleoside triphosphate hydrolases
MCJ_002480	SSF90123	ABC transporter transmembrane region
MCJ_002490	SSF52540	P-loop containing nucleoside triphosphate hydrolases
MCJ_002490	SSF90123	ABC transporter transmembrane region
MCJ_002510	SSF51316	Mss4-like
MCJ_002520	SSF55174	Alpha-L RNA-binding motif
MCJ_002530	SSF47364	Domain of the SRP/SRP receptor G-proteins
MCJ_002530	SSF52540	P-loop containing nucleoside triphosphate hydrolases
MCJ_002540	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
MCJ_002550	SSF56281	Metallo-hydrolase/oxidoreductase
MCJ_002560	SSF52833	Thioredoxin-like
MCJ_002570	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
MCJ_002580	SSF52540	P-loop containing nucleoside triphosphate hydrolases
MCJ_002580	SSF52980	Restriction endonuclease-like
MCJ_002590	SSF51366	Ribulose-phoshate binding barrel
MCJ_002600	SSF51658	Xylose isomerase-like
MCJ_002610	SSF53639	AraD/HMP-PK domain-like
MCJ_002620	SSF56784	HAD-like
MCJ_002650	SSF49777	PEBP-like
MCJ_002660	SSF56808	Ribosomal protein L1
MCJ_002670	SSF46906	Ribosomal protein L11, C-terminal domain
MCJ_002670	SSF54747	Ribosomal L11/L12e N-terminal domain
MCJ_002680	SSF50249	Nucleic acid-binding proteins
MCJ_002680	SSF55681	Class II aaRS and biotin synthetases
MCJ_002700	SSF52540	P-loop containing nucleoside triphosphate hydrolases
MCJ_002720	SSF47781	RuvA domain 2-like
MCJ_002730	SSF46785	"Winged helix" DNA-binding domain
MCJ_002730	SSF52540	P-loop containing nucleoside triphosphate hydrolases
MCJ_002740	SSF51695	PLC-like phosphodiesterases
MCJ_002750	SSF103473	MFS general substrate transporter
MCJ_002760	SSF52540	P-loop containing nucleoside triphosphate hydrolases
MCJ_002760	SSF54814	Prokaryotic type KH domain (KH-domain type II)
MCJ_002770	SSF53927	Cytidine deaminase-like
MCJ_002780	SSF55486	Metalloproteases ("zincins"), catalytic domain
MCJ_002800	SSF52540	P-loop containing nucleoside triphosphate hydrolases
MCJ_002800	SSF90123	ABC transporter transmembrane region
MCJ_002810	SSF143856	DeoB insert domain-like
MCJ_002810	SSF53649	Alkaline phosphatase-like
MCJ_002820	SSF48013	NusB-like
MCJ_002840	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
MCJ_002840	SSF55174	Alpha-L RNA-binding motif
MCJ_002850	SSF53383	PLP-dependent transferases
MCJ_002860	SSF82649	SufE/NifU
MCJ_002870	SSF55120	Pseudouridine synthase
MCJ_002870	SSF55174	Alpha-L RNA-binding motif
MCJ_002910	SSF53748	Phosphoglycerate kinase
MCJ_002940	SSF143597	YojJ-like
MCJ_002950	SSF158791	MgtE N-terminal domain-like
MCJ_002950	SSF161093	MgtE membrane domain-like
MCJ_002950	SSF54631	CBS-domain pair
MCJ_002970	SSF89447	AbrB/MazE/MraZ-like
MCJ_002980	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
MCJ_002980	SSF81799	Putative methyltransferase TM0872, insert domain
MCJ_002990	SSF52490	Tubulin nucleotide-binding domain-like
MCJ_002990	SSF55307	Tubulin C-terminal domain-like
MCJ_003020	SSF51905	FAD/NAD(P)-binding domain
MCJ_003020	SSF55424	FAD/NAD-linked reductases, dimerisation (C-terminal) domain
MCJ_003030	SSF75217	alpha/beta knot
MCJ_003040	SSF101353	Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS)
MCJ_003040	SSF50447	Translation proteins
MCJ_003040	SSF55186	ThrRS/AlaRS common domain
MCJ_003040	SSF55681	Class II aaRS and biotin synthetases
MCJ_003050	SSF53098	Ribonuclease H-like
MCJ_003060	SSF53178	Peptidyl-tRNA hydrolase-like
MCJ_003070	SSF52402	Adenine nucleotide alpha hydrolases-like
MCJ_003080	SSF140990	FtsH protease domain-like
MCJ_003080	SSF52540	P-loop containing nucleoside triphosphate hydrolases
MCJ_003090	SSF50249	Nucleic acid-binding proteins
MCJ_003090	SSF55681	Class II aaRS and biotin synthetases
MCJ_003100	SSF56784	HAD-like
MCJ_003110	SSF50104	Translation proteins SH3-like domain
MCJ_003110	SSF50249	Nucleic acid-binding proteins
MCJ_003120	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
MCJ_003120	SSF52922	TK C-terminal domain-like
MCJ_003200	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
MCJ_003200	SSF52374	Nucleotidylyl transferase
MCJ_003210	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
MCJ_003220	SSF51690	Nicotinate/Quinolinate PRTase C-terminal domain-like
MCJ_003220	SSF54675	Nicotinate/Quinolinate PRTase N-terminal domain-like
MCJ_003240	SSF54211	Ribosomal protein S5 domain 2-like
MCJ_003250	SSF161098	MetI-like
MCJ_003260	SSF161098	MetI-like
MCJ_003270	SSF52540	P-loop containing nucleoside triphosphate hydrolases
MCJ_003290	SSF51556	Metallo-dependent hydrolases
MCJ_003310	SSF52794	PTS system IIB component-like
MCJ_003320	SSF55804	Phoshotransferase/anion transport protein
MCJ_003340	SSF159234	FomD-like
MCJ_003350	SSF54768	dsRNA-binding domain-like
MCJ_003350	SSF69065	RNase III domain-like
MCJ_003360	SSF53659	Isocitrate/Isopropylmalate dehydrogenase-like
MCJ_003370	SSF101473	DhaL-like
MCJ_003430	SSF52943	ATP synthase (F1-ATPase), gamma subunit
MCJ_003460	SSF47917	C-terminal domain of alpha and beta subunits of F1 ATP synthase
MCJ_003460	SSF52540	P-loop containing nucleoside triphosphate hydrolases
MCJ_003470	SSF47917	C-terminal domain of alpha and beta subunits of F1 ATP synthase
MCJ_003470	SSF50615	N-terminal domain of alpha and beta subunits of F1 ATP synthase
MCJ_003470	SSF52540	P-loop containing nucleoside triphosphate hydrolases
MCJ_003530	SSF52540	P-loop containing nucleoside triphosphate hydrolases
MCJ_003540	SSF50249	Nucleic acid-binding proteins
MCJ_003630	SSF52540	P-loop containing nucleoside triphosphate hydrolases
MCJ_003680	SSF48024	N-terminal domain of DnaB helicase
MCJ_003680	SSF52540	P-loop containing nucleoside triphosphate hydrolases
MCJ_003710	SSF52540	P-loop containing nucleoside triphosphate hydrolases
MCJ_003750	SSF56300	Metallo-dependent phosphatases
MCJ_003760	SSF55973	S-adenosylmethionine synthetase
MCJ_003790	SSF53790	Tetrapyrrole methylase
MCJ_003800	SSF52540	P-loop containing nucleoside triphosphate hydrolases
MCJ_003810	SSF52540	P-loop containing nucleoside triphosphate hydrolases
MCJ_003820	SSF111304	Recombination protein RecR
MCJ_003830	SSF82607	YbaB-like
MCJ_003840	SSF48019	post-AAA+ oligomerization domain-like
MCJ_003840	SSF52540	P-loop containing nucleoside triphosphate hydrolases
MCJ_003850	SSF82549	DAK1/DegV-like
MCJ_003870	SSF55681	Class II aaRS and biotin synthetases
MCJ_003870	SSF82649	SufE/NifU
MCJ_003880	SSF53474	alpha/beta-Hydrolases
MCJ_003890	SSF52317	Class I glutamine amidotransferase-like
MCJ_003900	SSF53448	Nucleotide-diphospho-sugar transferases
MCJ_003910	SSF53738	Phosphoglucomutase, first 3 domains
MCJ_003910	SSF55957	Phosphoglucomutase, C-terminal domain
MCJ_003920	SSF46589	tRNA-binding arm
MCJ_003920	SSF55681	Class II aaRS and biotin synthetases
MCJ_003930	SSF51604	Enolase C-terminal domain-like
MCJ_003930	SSF54826	Enolase N-terminal domain-like
MCJ_003940	SSF52266	SGNH hydrolase
MCJ_003970	SSF53098	Ribonuclease H-like
MCJ_003990	SSF46946	S13-like H2TH domain
MCJ_003990	SSF57716	Glucocorticoid receptor-like (DNA-binding domain)
MCJ_003990	SSF81624	N-terminal domain of MutM-like DNA repair proteins
MCJ_004000	SSF89623	Ribose/Galactose isomerase RpiB/AlsB
MCJ_004010	SSF47831	Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain
MCJ_004010	SSF51621	Phosphoenolpyruvate/pyruvate domain
MCJ_004010	SSF52009	Phosphohistidine domain
MCJ_004060	SSF52540	P-loop containing nucleoside triphosphate hydrolases
MCJ_004080	SSF52540	P-loop containing nucleoside triphosphate hydrolases
MCJ_004090	SSF52540	P-loop containing nucleoside triphosphate hydrolases
MCJ_004100	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
MCJ_004110	SSF116734	DNA methylase specificity domain
MCJ_004120	SSF116734	DNA methylase specificity domain
MCJ_004130	SSF56349	DNA breaking-rejoining enzymes
MCJ_004180	SSF51679	Bacterial luciferase-like
MCJ_004190	SSF51230	Single hybrid motif
MCJ_004200	SSF52467	DHS-like NAD/FAD-binding domain
MCJ_004210	SSF55681	Class II aaRS and biotin synthetases
MCJ_004210	SSF82649	SufE/NifU
MCJ_004220	SSF51395	FMN-linked oxidoreductases
MCJ_004270	SSF50494	Trypsin-like serine proteases
MCJ_004300	SSF53271	PRTase-like
MCJ_004380	SSF161098	MetI-like
MCJ_004390	SSF161098	MetI-like
MCJ_004400	SSF52540	P-loop containing nucleoside triphosphate hydrolases
MCJ_004410	SSF52540	P-loop containing nucleoside triphosphate hydrolases
MCJ_004440	SSF53850	Periplasmic binding protein-like II
MCJ_004450	SSF55486	Metalloproteases ("zincins"), catalytic domain
MCJ_004480	SSF50494	Trypsin-like serine proteases
MCJ_004490	SSF53092	Creatinase/prolidase N-terminal domain
MCJ_004490	SSF55920	Creatinase/aminopeptidase
MCJ_004500	SSF57829	Zn-binding ribosomal proteins
MCJ_004510	SSF56784	HAD-like
MCJ_004530	SSF54995	Ribosomal protein S6
MCJ_004540	SSF50249	Nucleic acid-binding proteins
MCJ_004550	SSF46911	Ribosomal protein S18
MCJ_004560	SSF52540	P-loop containing nucleoside triphosphate hydrolases
MCJ_004560	SSF81271	TGS-like
MCJ_004590	SSF52833	Thioredoxin-like
MCJ_004600	SSF55120	Pseudouridine synthase
MCJ_004600	SSF55174	Alpha-L RNA-binding motif
MCJ_004610	SSF47240	Ferritin-like
MCJ_004620	SSF143800	L28p-like
MCJ_004630	SSF52218	Flavoproteins
MCJ_004640	SSF52218	Flavoproteins
MCJ_004660	SSF52540	P-loop containing nucleoside triphosphate hydrolases
MCJ_004670	SSF52540	P-loop containing nucleoside triphosphate hydrolases
MCJ_004680	SSF52540	P-loop containing nucleoside triphosphate hydrolases
MCJ_004700	SSF47781	RuvA domain 2-like
MCJ_004700	SSF50249	Nucleic acid-binding proteins
MCJ_004700	SSF52113	BRCT domain
MCJ_004700	SSF56091	DNA ligase/mRNA capping enzyme, catalytic domain
MCJ_004720	SSF52980	Restriction endonuclease-like
MCJ_004930	SSF52540	P-loop containing nucleoside triphosphate hydrolases
MCJ_004990	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
MCJ_005000	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
MCJ_005030	SSF52540	P-loop containing nucleoside triphosphate hydrolases
MCJ_005050	SSF52540	P-loop containing nucleoside triphosphate hydrolases
MCJ_005080	SSF51679	Bacterial luciferase-like
MCJ_005110	SSF52374	Nucleotidylyl transferase
MCJ_005120	SSF56784	HAD-like
MCJ_005130	SSF55120	Pseudouridine synthase
MCJ_005190	SSF46955	Putative DNA-binding domain
MCJ_005190	SSF50249	Nucleic acid-binding proteins
MCJ_005190	SSF55681	Class II aaRS and biotin synthetases
MCJ_005190	SSF56037	PheT/TilS domain
MCJ_005200	SSF46589	tRNA-binding arm
MCJ_005200	SSF55681	Class II aaRS and biotin synthetases
MCJ_005260	SSF51905	FAD/NAD(P)-binding domain
MCJ_005280	SSF46689	Homeodomain-like
MCJ_005280	SSF53697	SIS domain
MCJ_005290	SSF56784	HAD-like
MCJ_005290	SSF81653	Calcium ATPase, transduction domain A
MCJ_005290	SSF81665	Calcium ATPase, transmembrane domain M
MCJ_005300	SSF51905	FAD/NAD(P)-binding domain
MCJ_005300	SSF55424	FAD/NAD-linked reductases, dimerisation (C-terminal) domain
MCJ_005310	SSF51182	RmlC-like cupins
MCJ_005330	SSF52794	PTS system IIB component-like
MCJ_005330	SSF55804	Phoshotransferase/anion transport protein
MCJ_005350	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
MCJ_005350	SSF50677	ValRS/IleRS/LeuRS editing domain
MCJ_005350	SSF52374	Nucleotidylyl transferase
MCJ_005360	SSF101904	GyrA/ParC C-terminal domain-like
MCJ_005360	SSF56719	Type II DNA topoisomerase
MCJ_005370	SSF54211	Ribosomal protein S5 domain 2-like
MCJ_005370	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
MCJ_005370	SSF56719	Type II DNA topoisomerase
MCJ_005380	SSF51735	NAD(P)-binding Rossmann-fold domains
MCJ_005380	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
MCJ_005390	SSF47807	5' to 3' exonuclease, C-terminal subdomain
MCJ_005390	SSF88723	PIN domain-like
MCJ_005400	SSF89550	PHP domain-like
MCJ_005420	SSF89919	Ribosome-binding factor A, RbfA
MCJ_005430	SSF50447	Translation proteins
MCJ_005430	SSF52156	Initiation factor IF2/eIF5b, domain 3
MCJ_005430	SSF52540	P-loop containing nucleoside triphosphate hydrolases
MCJ_005440	SSF64376	YlxR-like
MCJ_005450	SSF50249	Nucleic acid-binding proteins
MCJ_005450	SSF54814	Prokaryotic type KH domain (KH-domain type II)
MCJ_005450	SSF69705	Transcription factor NusA, N-terminal domain
MCJ_005460	SSF75420	YhbC-like, N-terminal domain
MCJ_005470	SSF56112	Protein kinase-like (PK-like)
MCJ_005480	SSF53474	alpha/beta-Hydrolases
MCJ_005490	SSF116734	DNA methylase specificity domain
MCJ_005500	SSF116734	DNA methylase specificity domain
MCJ_005510	SSF116734	DNA methylase specificity domain
MCJ_005510	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
MCJ_005530	SSF50447	Translation proteins
MCJ_005530	SSF50465	EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
MCJ_005530	SSF52540	P-loop containing nucleoside triphosphate hydrolases
MCJ_005540	SSF52540	P-loop containing nucleoside triphosphate hydrolases
MCJ_005540	SSF54211	Ribosomal protein S5 domain 2-like
MCJ_005560	SSF53271	PRTase-like
MCJ_005570	SSF51569	Aldolase
MCJ_005580	SSF47648	Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain
MCJ_005580	SSF52418	Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain
MCJ_005580	SSF54680	Pyrimidine nucleoside phosphorylase C-terminal domain
MCJ_005590	SSF47648	Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain
MCJ_005590	SSF52418	Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain
MCJ_005590	SSF54680	Pyrimidine nucleoside phosphorylase C-terminal domain
MCJ_005600	SSF53167	Purine and uridine phosphorylases
MCJ_005620	SSF52540	P-loop containing nucleoside triphosphate hydrolases
MCJ_005620	SSF81767	Pre-protein crosslinking domain of SecA
MCJ_005620	SSF81886	Helical scaffold and wing domains of SecA
MCJ_005630	SSF52266	SGNH hydrolase
MCJ_005650	SSF116734	DNA methylase specificity domain
MCJ_005670	SSF53784	Phosphofructokinase
MCJ_005700	SSF101386	all-alpha NTP pyrophosphatases
MCJ_005710	SSF52540	P-loop containing nucleoside triphosphate hydrolases
MCJ_005720	SSF74982	Small protein B (SmpB)
MCJ_005730	SSF50199	Staphylococcal nuclease
MCJ_005740	SSF52540	P-loop containing nucleoside triphosphate hydrolases
MCJ_005740	SSF75553	Smc hinge domain
MCJ_005760	SSF52743	Subtilisin-like
MCJ_005770	SSF52317	Class I glutamine amidotransferase-like
MCJ_005770	SSF52540	P-loop containing nucleoside triphosphate hydrolases
MCJ_005790	SSF50249	Nucleic acid-binding proteins
MCJ_005790	SSF55261	GAD domain-like
MCJ_005790	SSF55681	Class II aaRS and biotin synthetases
MCJ_005800	SSF52954	Class II aaRS ABD-related
MCJ_005800	SSF55681	Class II aaRS and biotin synthetases
MCJ_005810	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
MCJ_005830	SSF53383	PLP-dependent transferases
MCJ_005850	SSF161098	MetI-like
MCJ_005860	SSF161098	MetI-like
MCJ_005870	SSF50331	MOP-like
MCJ_005870	SSF52540	P-loop containing nucleoside triphosphate hydrolases
MCJ_005890	SSF55816	5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain
MCJ_005890	SSF56300	Metallo-dependent phosphatases
MCJ_005900	SSF103473	MFS general substrate transporter
MCJ_005920	SSF54197	HIT-like
MCJ_005950	SSF52540	P-loop containing nucleoside triphosphate hydrolases
MCJ_005950	SSF56784	HAD-like
MCJ_005980	SSF52540	P-loop containing nucleoside triphosphate hydrolases
MCJ_005990	SSF103025	Folate-binding domain
MCJ_005990	SSF116878	TrmE connector domain
MCJ_005990	SSF52540	P-loop containing nucleoside triphosphate hydrolases
MCJ_006020	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
MCJ_006050	SSF52402	Adenine nucleotide alpha hydrolases-like
MCJ_006060	SSF75625	YebC-like
MCJ_006120	SSF53448	Nucleotide-diphospho-sugar transferases
MCJ_006130	SSF51735	NAD(P)-binding Rossmann-fold domains
MCJ_006130	SSF56327	LDH C-terminal domain-like
MCJ_006140	SSF103473	MFS general substrate transporter
MCJ_006150	SSF48173	Cryptochrome/photolyase FAD-binding domain
MCJ_006150	SSF52425	Cryptochrome/photolyase, N-terminal domain
MCJ_006160	SSF52374	Nucleotidylyl transferase
MCJ_006230	SSF46565	Chaperone J-domain
MCJ_006230	SSF49493	HSP40/DnaJ peptide-binding domain
MCJ_006230	SSF57938	DnaJ/Hsp40 cysteine-rich domain
MCJ_006240	SSF82771	GIY-YIG endonuclease
MCJ_006250	SSF103473	MFS general substrate transporter
MCJ_006260	SSF100920	Heat shock protein 70kD (HSP70), peptide-binding domain
MCJ_006260	SSF100934	Heat shock protein 70kD (HSP70), C-terminal subdomain
MCJ_006260	SSF53067	Actin-like ATPase domain
MCJ_006270	SSF50249	Nucleic acid-binding proteins
MCJ_006270	SSF57863	ArfGap/RecO-like zinc finger
MCJ_006280	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
MCJ_006290	SSF52540	P-loop containing nucleoside triphosphate hydrolases
MCJ_006300	SSF50249	Nucleic acid-binding proteins
MCJ_006300	SSF52540	P-loop containing nucleoside triphosphate hydrolases
MCJ_006310	SSF51366	Ribulose-phoshate binding barrel
MCJ_006320	SSF46992	Ribosomal protein S20
MCJ_006340	SSF53098	Ribonuclease H-like
MCJ_006380	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
MCJ_006400	SSF55804	Phoshotransferase/anion transport protein
MCJ_006410	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
MCJ_006410	SSF51735	NAD(P)-binding Rossmann-fold domains
MCJ_006420	SSF52794	PTS system IIB component-like
MCJ_006430	SSF46689	Homeodomain-like
MCJ_006430	SSF53697	SIS domain
MCJ_006450	SSF51344	Epsilon subunit of F1F0-ATP synthase N-terminal domain
MCJ_006460	SSF47917	C-terminal domain of alpha and beta subunits of F1 ATP synthase
MCJ_006460	SSF50615	N-terminal domain of alpha and beta subunits of F1 ATP synthase
MCJ_006460	SSF52540	P-loop containing nucleoside triphosphate hydrolases
MCJ_006470	SSF52943	ATP synthase (F1-ATPase), gamma subunit
MCJ_006480	SSF47917	C-terminal domain of alpha and beta subunits of F1 ATP synthase
MCJ_006480	SSF50615	N-terminal domain of alpha and beta subunits of F1 ATP synthase
MCJ_006480	SSF52540	P-loop containing nucleoside triphosphate hydrolases
MCJ_006490	SSF47928	N-terminal domain of the delta subunit of the F1F0-ATP synthase
MCJ_006510	SSF81333	F1F0 ATP synthase subunit C
MCJ_006520	SSF81336	F1F0 ATP synthase subunit A
MCJ_006530	SSF56672	DNA/RNA polymerases
MCJ_006540	SSF47336	ACP-like
MCJ_006580	SSF102741	Obg GTP-binding protein C-terminal domain
MCJ_006580	SSF52540	P-loop containing nucleoside triphosphate hydrolases
MCJ_006580	SSF82051	Obg GTP-binding protein N-terminal domain
MCJ_006590	SSF56112	Protein kinase-like (PK-like)
MCJ_006600	SSF52540	P-loop containing nucleoside triphosphate hydrolases
MCJ_006600	SSF54752	RecA protein, C-terminal domain
MCJ_006610	SSF56024	Phospholipase D/nuclease
MCJ_006630	SSF50249	Nucleic acid-binding proteins
MCJ_006640	SSF56281	Metallo-hydrolase/oxidoreductase
MCJ_006650	SSF52540	P-loop containing nucleoside triphosphate hydrolases
MCJ_006670	SSF52954	Class II aaRS ABD-related
MCJ_006670	SSF55186	ThrRS/AlaRS common domain
MCJ_006670	SSF55681	Class II aaRS and biotin synthetases
MCJ_006680	SSF52374	Nucleotidylyl transferase
MCJ_006690	SSF55604	Glucose permease domain IIB
MCJ_006700	SSF52540	P-loop containing nucleoside triphosphate hydrolases
MCJ_006710	SSF53098	Ribonuclease H-like
MCJ_006730	SSF53649	Alkaline phosphatase-like
MCJ_006730	SSF64158	2,3-Bisphosphoglycerate-independent phosphoglycerate mutase, substrate-binding domain
MCJ_006770	SSF53633	Carbamate kinase-like
MCJ_006780	SSF55194	Ribosome recycling factor, RRF
MCJ_006810	SSF53067	Actin-like ATPase domain
MCJ_006820	SSF52540	P-loop containing nucleoside triphosphate hydrolases
MCJ_006830	SSF64484	beta and beta-prime subunits of DNA dependent RNA-polymerase
MCJ_006840	SSF64484	beta and beta-prime subunits of DNA dependent RNA-polymerase
MCJ_006850	SSF48300	Ribosomal protein L7/12, oligomerisation (N-terminal) domain
MCJ_006850	SSF54736	ClpS-like
MCJ_006860	SSF160369	Ribosomal protein L10-like
MCJ_006970	SSF143800	L28p-like
MCJ_006980	SSF74731	Ribosomal protein L20
MCJ_006990	SSF143034	L35p-like
MCJ_007000	SSF54364	Translation initiation factor IF3, N-terminal domain
MCJ_007000	SSF55200	Translation initiation factor IF3, C-terminal domain
MCJ_007010	SSF52540	P-loop containing nucleoside triphosphate hydrolases
MCJ_007010	SSF57716	Glucocorticoid receptor-like (DNA-binding domain)
MCJ_007040	SSF52540	P-loop containing nucleoside triphosphate hydrolases
MCJ_007060	SSF50324	Inorganic pyrophosphatase
MCJ_007080	SSF55608	Homing endonucleases
MCJ_007110	SSF116726	TrkA C-terminal domain-like
MCJ_007110	SSF51735	NAD(P)-binding Rossmann-fold domains
MCJ_007140	SSF53697	SIS domain
MCJ_007160	SSF53098	Ribonuclease H-like
MCJ_007160	SSF89550	PHP domain-like
MCJ_007190	SSF51306	LexA/Signal peptidase
MCJ_007200	SSF52540	P-loop containing nucleoside triphosphate hydrolases
MCJ_007250	SSF46557	GreA transcript cleavage protein, N-terminal domain
MCJ_007250	SSF54534	FKBP-like
MCJ_007290	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
MCJ_007290	SSF50677	ValRS/IleRS/LeuRS editing domain
MCJ_007290	SSF52374	Nucleotidylyl transferase
MCJ_007300	SSF56784	HAD-like
MCJ_007300	SSF81653	Calcium ATPase, transduction domain A
MCJ_007300	SSF81660	Metal cation-transporting ATPase, ATP-binding domain N
MCJ_007300	SSF81665	Calcium ATPase, transmembrane domain M
MCJ_007310	SSF55008	HMA, heavy metal-associated domain