NRI_0009	PWY-5269	cardiolipin biosynthesis II
NRI_0009	PWY-5668	cardiolipin biosynthesis I
NRI_0015	PWY-6700	queuosine biosynthesis
NRI_0029	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
NRI_0029	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
NRI_0029	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
NRI_0038	PWY-5523	5,6-dimethylbenzimidazole biosynthesis
NRI_0038	PWY-6167	flavin biosynthesis II (archaea)
NRI_0038	PWY-6168	flavin biosynthesis III (fungi)
NRI_0041	PWY-5971	palmitate biosynthesis II (bacteria and plants)
NRI_0041	PWY-5973	<i>cis</i>-vaccenate biosynthesis
NRI_0041	PWY-5989	stearate biosynthesis II (bacteria and plants)
NRI_0041	PWY-6113	superpathway of mycolate biosynthesis
NRI_0041	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
NRI_0041	PWY-6519	8-amino-7-oxononanoate biosynthesis I
NRI_0041	PWY-7096	triclosan resistance
NRI_0041	PWYG-321	mycolate biosynthesis
NRI_0054	PWY-5392	reductive TCA cycle II
NRI_0054	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
NRI_0054	PWY-5690	TCA cycle II (plants and fungi)
NRI_0054	PWY-5913	TCA cycle VI (obligate autotrophs)
NRI_0054	PWY-6728	methylaspartate cycle
NRI_0054	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
NRI_0054	PWY-7254	TCA cycle VII (acetate-producers)
NRI_0054	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
NRI_0059	PWY-6123	inosine-5'-phosphate biosynthesis I
NRI_0059	PWY-6124	inosine-5'-phosphate biosynthesis II
NRI_0059	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
NRI_0059	PWY-7234	inosine-5'-phosphate biosynthesis III
NRI_0067	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
NRI_0095	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
NRI_0095	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
NRI_0121	PWY-3781	aerobic respiration I (cytochrome c)
NRI_0121	PWY-4521	arsenite oxidation I (respiratory)
NRI_0121	PWY-6692	Fe(II) oxidation
NRI_0121	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
NRI_0123	PWY-5316	nicotine biosynthesis
NRI_0123	PWY-5381	pyridine nucleotide cycling (plants)
NRI_0123	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
NRI_0123	PWY-7342	superpathway of nicotine biosynthesis
NRI_0132	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
NRI_0136	PWY-7560	methylerythritol phosphate pathway II
NRI_0151	PWY-5686	UMP biosynthesis
NRI_0159	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
NRI_0168	PWY-5913	TCA cycle VI (obligate autotrophs)
NRI_0168	PWY-6549	L-glutamine biosynthesis III
NRI_0168	PWY-6728	methylaspartate cycle
NRI_0168	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
NRI_0168	PWY-7124	ethylene biosynthesis V (engineered)
NRI_0168	PWY-7254	TCA cycle VII (acetate-producers)
NRI_0168	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
NRI_0173	PWY-7560	methylerythritol phosphate pathway II
NRI_0174	PWY-5686	UMP biosynthesis
NRI_0180	PWY-6123	inosine-5'-phosphate biosynthesis I
NRI_0180	PWY-6124	inosine-5'-phosphate biosynthesis II
NRI_0180	PWY-7234	inosine-5'-phosphate biosynthesis III
NRI_0183	PWY-723	alkylnitronates degradation
NRI_0187	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
NRI_0187	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
NRI_0187	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
NRI_0187	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
NRI_0210	PWY-1622	formaldehyde assimilation I (serine pathway)
NRI_0210	PWY-181	photorespiration
NRI_0210	PWY-2161	folate polyglutamylation
NRI_0210	PWY-2201	folate transformations I
NRI_0210	PWY-3661	glycine betaine degradation I
NRI_0210	PWY-3661-1	glycine betaine degradation II (mammalian)
NRI_0210	PWY-3841	folate transformations II
NRI_0210	PWY-5497	purine nucleobases degradation II (anaerobic)
NRI_0212	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
NRI_0212	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
NRI_0212	PWY-6897	thiamin salvage II
NRI_0212	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
NRI_0212	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
NRI_0212	PWY-7353	4-methyl-5(&beta;-hydroxyethyl)thiazole salvage (yeast)
NRI_0212	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
NRI_0213	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
NRI_0213	PWY-5686	UMP biosynthesis
NRI_0213	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
NRI_0217	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
NRI_0220	PWY-5667	CDP-diacylglycerol biosynthesis I
NRI_0220	PWY-5981	CDP-diacylglycerol biosynthesis III
NRI_0227	PWY-6123	inosine-5'-phosphate biosynthesis I
NRI_0227	PWY-7234	inosine-5'-phosphate biosynthesis III
NRI_0239	PWY-5669	phosphatidylethanolamine biosynthesis I
NRI_0241	PWY-5392	reductive TCA cycle II
NRI_0241	PWY-5537	pyruvate fermentation to acetate V
NRI_0241	PWY-5538	pyruvate fermentation to acetate VI
NRI_0241	PWY-5690	TCA cycle II (plants and fungi)
NRI_0241	PWY-5913	TCA cycle VI (obligate autotrophs)
NRI_0241	PWY-6728	methylaspartate cycle
NRI_0241	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
NRI_0241	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
NRI_0242	PWY-5392	reductive TCA cycle II
NRI_0242	PWY-5537	pyruvate fermentation to acetate V
NRI_0242	PWY-5538	pyruvate fermentation to acetate VI
NRI_0242	PWY-5690	TCA cycle II (plants and fungi)
NRI_0242	PWY-5913	TCA cycle VI (obligate autotrophs)
NRI_0242	PWY-6728	methylaspartate cycle
NRI_0242	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
NRI_0242	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
NRI_0244	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
NRI_0244	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
NRI_0244	PWY-6896	thiamin salvage I
NRI_0244	PWY-6897	thiamin salvage II
NRI_0245	PWY-1042	glycolysis IV (plant cytosol)
NRI_0245	PWY-5484	glycolysis II (from fructose 6-phosphate)
NRI_0245	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
NRI_0245	PWY-7003	glycerol degradation to butanol
NRI_0247	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
NRI_0251	PWY-2941	L-lysine biosynthesis II
NRI_0251	PWY-2942	L-lysine biosynthesis III
NRI_0251	PWY-5097	L-lysine biosynthesis VI
NRI_0251	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
NRI_0251	PWY-6559	spermidine biosynthesis II
NRI_0251	PWY-6562	norspermidine biosynthesis
NRI_0251	PWY-7153	grixazone biosynthesis
NRI_0251	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
NRI_0277	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
NRI_0283	PWY-5269	cardiolipin biosynthesis II
NRI_0283	PWY-5668	cardiolipin biosynthesis I
NRI_0294	PWY-6823	molybdenum cofactor biosynthesis
NRI_0294	PWY-6891	thiazole biosynthesis II (Bacillus)
NRI_0294	PWY-6892	thiazole biosynthesis I (E. coli)
NRI_0294	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
NRI_0302	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
NRI_0302	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
NRI_0302	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
NRI_0316	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
NRI_0316	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
NRI_0316	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
NRI_0329	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
NRI_0329	PWY-5723	Rubisco shunt
NRI_0339	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
NRI_0339	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
NRI_0339	PWY-6897	thiamin salvage II
NRI_0339	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
NRI_0339	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
NRI_0339	PWY-7353	4-methyl-5(&beta;-hydroxyethyl)thiazole salvage (yeast)
NRI_0339	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
NRI_0341	PWY-381	nitrate reduction II (assimilatory)
NRI_0341	PWY-5675	nitrate reduction V (assimilatory)
NRI_0341	PWY-6549	L-glutamine biosynthesis III
NRI_0341	PWY-6963	ammonia assimilation cycle I
NRI_0341	PWY-6964	ammonia assimilation cycle II
NRI_0354	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
NRI_0354	PWY-6549	L-glutamine biosynthesis III
NRI_0354	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
NRI_0354	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
NRI_0355	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
NRI_0355	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
NRI_0358	PWY-5381	pyridine nucleotide cycling (plants)
NRI_0358	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
NRI_0358	PWY-6596	adenosine nucleotides degradation I
NRI_0358	PWY-6606	guanosine nucleotides degradation II
NRI_0358	PWY-6607	guanosine nucleotides degradation I
NRI_0358	PWY-6608	guanosine nucleotides degradation III
NRI_0358	PWY-7185	UTP and CTP dephosphorylation I
NRI_0359	PWY-3781	aerobic respiration I (cytochrome c)
NRI_0359	PWY-4302	aerobic respiration III (alternative oxidase pathway)
NRI_0359	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
NRI_0359	PWY-5690	TCA cycle II (plants and fungi)
NRI_0359	PWY-6728	methylaspartate cycle
NRI_0359	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
NRI_0359	PWY-7254	TCA cycle VII (acetate-producers)
NRI_0359	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
NRI_0366	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
NRI_0366	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
NRI_0375	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
NRI_0375	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
NRI_0379	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
NRI_0382	PWY-6167	flavin biosynthesis II (archaea)
NRI_0382	PWY-6168	flavin biosynthesis III (fungi)
NRI_0390	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
NRI_0390	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
NRI_0390	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
NRI_0390	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
NRI_0390	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
NRI_0390	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
NRI_0390	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
NRI_0390	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
NRI_0399	PWY-1281	sulfoacetaldehyde degradation I
NRI_0399	PWY-5482	pyruvate fermentation to acetate II
NRI_0399	PWY-5485	pyruvate fermentation to acetate IV
NRI_0399	PWY-5497	purine nucleobases degradation II (anaerobic)
NRI_0399	PWY-6637	sulfolactate degradation II
NRI_0400	PWY-1281	sulfoacetaldehyde degradation I
NRI_0400	PWY-5482	pyruvate fermentation to acetate II
NRI_0400	PWY-5485	pyruvate fermentation to acetate IV
NRI_0400	PWY-5497	purine nucleobases degradation II (anaerobic)
NRI_0400	PWY-6637	sulfolactate degradation II
NRI_0410	PWY-1042	glycolysis IV (plant cytosol)
NRI_0410	PWY-5484	glycolysis II (from fructose 6-phosphate)
NRI_0410	PWY-6901	superpathway of glucose and xylose degradation
NRI_0410	PWY-7003	glycerol degradation to butanol
NRI_0411	PWY-1042	glycolysis IV (plant cytosol)
NRI_0411	PWY-5484	glycolysis II (from fructose 6-phosphate)
NRI_0411	PWY-6886	1-butanol autotrophic biosynthesis
NRI_0411	PWY-6901	superpathway of glucose and xylose degradation
NRI_0411	PWY-7003	glycerol degradation to butanol
NRI_0412	PWY-7560	methylerythritol phosphate pathway II
NRI_0415	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
NRI_0415	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
NRI_0419	PWY-7560	methylerythritol phosphate pathway II
NRI_0429	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
NRI_0429	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
NRI_0438	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
NRI_0438	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
NRI_0449	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
NRI_0449	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
NRI_0450	PWY-5988	wound-induced proteolysis I
NRI_0450	PWY-6018	seed germination protein turnover
NRI_0453	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
NRI_0453	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
NRI_0458	PWY-6891	thiazole biosynthesis II (Bacillus)
NRI_0458	PWY-6892	thiazole biosynthesis I (E. coli)
NRI_0459	PWY-6614	tetrahydrofolate biosynthesis
NRI_0460	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
NRI_0460	PWY-6148	tetrahydromethanopterin biosynthesis
NRI_0460	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
NRI_0460	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
NRI_0461	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
NRI_0461	PWY-5912	2'-deoxymugineic acid phytosiderophore biosynthesis
NRI_0474	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
NRI_0474	PWY-6148	tetrahydromethanopterin biosynthesis
NRI_0474	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
NRI_0474	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
NRI_0475	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
NRI_0475	PWY-5686	UMP biosynthesis
NRI_0475	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
NRI_0483	PWY-5686	UMP biosynthesis
NRI_0487	PWY-5022	4-aminobutanoate degradation V
NRI_0487	PWY-6728	methylaspartate cycle
NRI_0487	PWY-7126	ethylene biosynthesis IV
NRI_0492	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
NRI_0495	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
NRI_0495	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
NRI_0495	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
NRI_0495	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
NRI_0495	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
NRI_0495	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
NRI_0495	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
NRI_0495	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
NRI_0502	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
NRI_0502	PWY-6596	adenosine nucleotides degradation I
NRI_0502	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
NRI_0511	PWY-3781	aerobic respiration I (cytochrome c)
NRI_0511	PWY-4302	aerobic respiration III (alternative oxidase pathway)
NRI_0511	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
NRI_0511	PWY-5690	TCA cycle II (plants and fungi)
NRI_0511	PWY-6728	methylaspartate cycle
NRI_0511	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
NRI_0511	PWY-7254	TCA cycle VII (acetate-producers)
NRI_0511	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
NRI_0515	PWY-5686	UMP biosynthesis
NRI_0521	PWY-723	alkylnitronates degradation
NRI_0524	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
NRI_0524	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
NRI_0524	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
NRI_0524	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
NRI_0524	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
NRI_0524	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
NRI_0525	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
NRI_0534	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
NRI_0534	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
NRI_0534	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
NRI_0534	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
NRI_0534	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
NRI_0534	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
NRI_0534	PWY-7205	CMP phosphorylation
NRI_0534	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
NRI_0534	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
NRI_0534	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
NRI_0534	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
NRI_0534	PWY-7224	purine deoxyribonucleosides salvage
NRI_0534	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
NRI_0534	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
NRI_0544	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
NRI_0545	PWY-2781	<i>cis</i>-zeatin biosynthesis
NRI_0553	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
NRI_0561	PWY-5663	tetrahydrobiopterin biosynthesis I
NRI_0561	PWY-5664	tetrahydrobiopterin biosynthesis II
NRI_0561	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
NRI_0561	PWY-6703	preQ<sub>0</sub> biosynthesis
NRI_0561	PWY-6983	tetrahydrobiopterin biosynthesis III
NRI_0561	PWY-7442	drosopterin and aurodrosopterin biosynthesis
NRI_0565	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
NRI_0565	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
NRI_0568	PWY-5484	glycolysis II (from fructose 6-phosphate)
NRI_0583	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
NRI_0587	PWY-6519	8-amino-7-oxononanoate biosynthesis I
NRI_0588	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
NRI_0593	PWY-3781	aerobic respiration I (cytochrome c)
NRI_0593	PWY-4521	arsenite oxidation I (respiratory)
NRI_0593	PWY-6692	Fe(II) oxidation
NRI_0593	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
NRI_0595	PWY-3781	aerobic respiration I (cytochrome c)
NRI_0595	PWY-6692	Fe(II) oxidation
NRI_0595	PWY-7082	ammonia oxidation IV (autotrophic ammonia oxidizers)
NRI_0595	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
NRI_0599	PWY-5855	ubiquinol-7 biosynthesis (prokaryotic)
NRI_0599	PWY-5856	ubiquinol-9 biosynthesis (prokaryotic)
NRI_0599	PWY-5857	ubiquinol-10 biosynthesis (prokaryotic)
NRI_0599	PWY-5870	ubiquinol-8 biosynthesis (eukaryotic)
NRI_0599	PWY-5871	ubiquinol-9 biosynthesis (eukaryotic)
NRI_0599	PWY-5872	ubiquinol-10 biosynthesis (eukaryotic)
NRI_0599	PWY-5873	ubiquinol-7 biosynthesis (eukaryotic)
NRI_0599	PWY-6708	ubiquinol-8 biosynthesis (prokaryotic)
NRI_0599	PWY-7230	ubiquinol-6 biosynthesis from 4-aminobenzoate (eukaryotic)
NRI_0599	PWY-7233	ubiquinol-6 bypass biosynthesis (eukaryotic)
NRI_0603	PWY-4381	fatty acid biosynthesis initiation I
NRI_0622	PWY-6167	flavin biosynthesis II (archaea)
NRI_0622	PWY-6168	flavin biosynthesis III (fungi)
NRI_0640	PWY-5971	palmitate biosynthesis II (bacteria and plants)
NRI_0640	PWY-5973	<i>cis</i>-vaccenate biosynthesis
NRI_0640	PWY-5989	stearate biosynthesis II (bacteria and plants)
NRI_0640	PWY-5994	palmitate biosynthesis I (animals and fungi)
NRI_0640	PWY-6113	superpathway of mycolate biosynthesis
NRI_0640	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
NRI_0640	PWY-6519	8-amino-7-oxononanoate biosynthesis I
NRI_0640	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
NRI_0640	PWYG-321	mycolate biosynthesis
NRI_0648	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
NRI_0648	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
NRI_0670	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
NRI_0670	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
NRI_0674	PWY-381	nitrate reduction II (assimilatory)
NRI_0674	PWY-5675	nitrate reduction V (assimilatory)
NRI_0674	PWY-6549	L-glutamine biosynthesis III
NRI_0674	PWY-6963	ammonia assimilation cycle I
NRI_0674	PWY-6964	ammonia assimilation cycle II
NRI_0682	PWY-6891	thiazole biosynthesis II (Bacillus)
NRI_0682	PWY-6892	thiazole biosynthesis I (E. coli)
NRI_0682	PWY-7560	methylerythritol phosphate pathway II
NRI_0693	PWY-2161	folate polyglutamylation
NRI_0697	PWY-7560	methylerythritol phosphate pathway II
NRI_0702	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
NRI_0707	PWY-1042	glycolysis IV (plant cytosol)
NRI_0707	PWY-1622	formaldehyde assimilation I (serine pathway)
NRI_0707	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
NRI_0707	PWY-5484	glycolysis II (from fructose 6-phosphate)
NRI_0707	PWY-5723	Rubisco shunt
NRI_0707	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
NRI_0707	PWY-6886	1-butanol autotrophic biosynthesis
NRI_0707	PWY-6901	superpathway of glucose and xylose degradation
NRI_0707	PWY-7003	glycerol degradation to butanol
NRI_0707	PWY-7124	ethylene biosynthesis V (engineered)
NRI_0707	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
NRI_0711	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
NRI_0719	PWY-6168	flavin biosynthesis III (fungi)
NRI_0719	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
NRI_0733	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
NRI_0733	PWY-5723	Rubisco shunt
NRI_0735	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
NRI_0743	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
NRI_0746	PWY-101	photosynthesis light reactions
NRI_0746	PWY-7230	ubiquinol-6 biosynthesis from 4-aminobenzoate (eukaryotic)
NRI_0760	PWY-5686	UMP biosynthesis
NRI_0763	PWY-4381	fatty acid biosynthesis initiation I
NRI_0763	PWY-5743	3-hydroxypropanoate cycle
NRI_0763	PWY-5744	glyoxylate assimilation
NRI_0763	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
NRI_0763	PWY-6679	jadomycin biosynthesis
NRI_0763	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
NRI_0766	PWY-7560	methylerythritol phosphate pathway II
NRI_0778	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
NRI_0778	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
NRI_0778	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
NRI_0790	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
NRI_0790	PWY-2201	folate transformations I
NRI_0790	PWY-3841	folate transformations II
NRI_0790	PWY-5030	L-histidine degradation III
NRI_0790	PWY-5497	purine nucleobases degradation II (anaerobic)
NRI_0790	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
NRI_0797	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
NRI_0797	PWY-7536	2-amino-3-hydroxycyclopent-2-enone biosynthesis
NRI_0811	PWY-6854	ethylene biosynthesis III (microbes)
NRI_0821	PWY-6123	inosine-5'-phosphate biosynthesis I
NRI_0821	PWY-6124	inosine-5'-phosphate biosynthesis II
NRI_0821	PWY-7234	inosine-5'-phosphate biosynthesis III
NRI_0822	PWY-6167	flavin biosynthesis II (archaea)
NRI_0822	PWY-6168	flavin biosynthesis III (fungi)
NRI_0822	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
NRI_0843	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
NRI_0843	PWY-7177	UTP and CTP dephosphorylation II
NRI_0843	PWY-7185	UTP and CTP dephosphorylation I
NRI_0854	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
NRI_0858	PWY-1042	glycolysis IV (plant cytosol)
NRI_0858	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
NRI_0858	PWY-5484	glycolysis II (from fructose 6-phosphate)
NRI_0858	PWY-5723	Rubisco shunt
NRI_0858	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
NRI_0858	PWY-6886	1-butanol autotrophic biosynthesis
NRI_0858	PWY-6901	superpathway of glucose and xylose degradation
NRI_0858	PWY-7003	glycerol degradation to butanol
NRI_0858	PWY-7124	ethylene biosynthesis V (engineered)
NRI_0858	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
NRI_0863	PWY-6829	tRNA methylation (yeast)
NRI_0863	PWY-7285	methylwyosine biosynthesis
NRI_0863	PWY-7286	7-(3-amino-3-carboxypropyl)-wyosine biosynthesis
NRI_0888	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
NRI_0888	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
NRI_0888	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
NRI_0891	PWY-2941	L-lysine biosynthesis II
NRI_0891	PWY-2942	L-lysine biosynthesis III
NRI_0891	PWY-5097	L-lysine biosynthesis VI
NRI_0909	PWY-5839	menaquinol-7 biosynthesis
NRI_0909	PWY-5844	menaquinol-9 biosynthesis
NRI_0909	PWY-5849	menaquinol-6 biosynthesis
NRI_0909	PWY-5890	menaquinol-10 biosynthesis
NRI_0909	PWY-5891	menaquinol-11 biosynthesis
NRI_0909	PWY-5892	menaquinol-12 biosynthesis
NRI_0909	PWY-5895	menaquinol-13 biosynthesis
NRI_0913	PWY-1622	formaldehyde assimilation I (serine pathway)
NRI_0913	PWY-5392	reductive TCA cycle II
NRI_0913	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
NRI_0913	PWY-5690	TCA cycle II (plants and fungi)
NRI_0913	PWY-5913	TCA cycle VI (obligate autotrophs)
NRI_0913	PWY-6728	methylaspartate cycle
NRI_0913	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
NRI_0913	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
NRI_0913	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
NRI_0915	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
NRI_0915	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
NRI_0915	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
NRI_0915	PWY-7206	pyrimidine deoxyribonucleotides dephosphorylation
NRI_0919	PWY-4381	fatty acid biosynthesis initiation I
NRI_0919	PWY-6799	fatty acid biosynthesis (plant mitochondria)
NRI_0919	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
NRI_0921	PWY-6012	acyl carrier protein metabolism I
NRI_0921	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
NRI_0923	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
NRI_0928	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
NRI_0928	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
NRI_0929	PWY-5316	nicotine biosynthesis
NRI_0929	PWY-7342	superpathway of nicotine biosynthesis
