Neut_0065	PWY-5839	menaquinol-7 biosynthesis
Neut_0065	PWY-5844	menaquinol-9 biosynthesis
Neut_0065	PWY-5849	menaquinol-6 biosynthesis
Neut_0065	PWY-5890	menaquinol-10 biosynthesis
Neut_0065	PWY-5891	menaquinol-11 biosynthesis
Neut_0065	PWY-5892	menaquinol-12 biosynthesis
Neut_0065	PWY-5895	menaquinol-13 biosynthesis
Neut_0135	PWY-5958	acridone alkaloid biosynthesis
Neut_0135	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
Neut_0135	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
Neut_0140	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Neut_0140	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
Neut_0140	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
Neut_0144	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
Neut_0145	PWY-6938	NADH repair
Neut_0157	PWY-6478	GDP-D-<i>glycero</i>-&alpha;-D-<i>manno</i>-heptose biosynthesis
Neut_0158	PWY-6478	GDP-D-<i>glycero</i>-&alpha;-D-<i>manno</i>-heptose biosynthesis
Neut_0164	PWY-5340	sulfate activation for sulfonation
Neut_0196	PWY-6890	4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis
Neut_0200	PWY-6832	2-aminoethylphosphonate degradation II
Neut_0220	PWY-5392	reductive TCA cycle II
Neut_0220	PWY-5537	pyruvate fermentation to acetate V
Neut_0220	PWY-5538	pyruvate fermentation to acetate VI
Neut_0220	PWY-5690	TCA cycle II (plants and fungi)
Neut_0220	PWY-5913	TCA cycle VI (obligate autotrophs)
Neut_0220	PWY-6728	methylaspartate cycle
Neut_0220	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Neut_0220	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Neut_0221	PWY-5392	reductive TCA cycle II
Neut_0221	PWY-5537	pyruvate fermentation to acetate V
Neut_0221	PWY-5538	pyruvate fermentation to acetate VI
Neut_0221	PWY-5690	TCA cycle II (plants and fungi)
Neut_0221	PWY-5913	TCA cycle VI (obligate autotrophs)
Neut_0221	PWY-6728	methylaspartate cycle
Neut_0221	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Neut_0221	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Neut_0223	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
Neut_0223	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
Neut_0232	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
Neut_0232	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
Neut_0233	PWY-3961	phosphopantothenate biosynthesis II
Neut_0235	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Neut_0235	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
Neut_0243	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Neut_0243	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Neut_0244	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Neut_0244	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Neut_0245	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Neut_0245	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Neut_0246	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
Neut_0246	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
Neut_0246	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
Neut_0246	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
Neut_0248	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Neut_0248	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Neut_0249	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
Neut_0249	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
Neut_0249	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
Neut_0250	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Neut_0250	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Neut_0262	PWY-6605	adenine and adenosine salvage II
Neut_0262	PWY-6610	adenine and adenosine salvage IV
Neut_0263	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
Neut_0265	PWY-1622	formaldehyde assimilation I (serine pathway)
Neut_0265	PWY-5484	glycolysis II (from fructose 6-phosphate)
Neut_0269	PWY-6823	molybdenum cofactor biosynthesis
Neut_0269	PWY-6891	thiazole biosynthesis II (Bacillus)
Neut_0269	PWY-6892	thiazole biosynthesis I (E. coli)
Neut_0269	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
Neut_0275	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Neut_0277	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Neut_0279	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
Neut_0280	PWY-6749	CMP-legionaminate biosynthesis I
Neut_0292	PWY-6703	preQ<sub>0</sub> biosynthesis
Neut_0293	PWY-6703	preQ<sub>0</sub> biosynthesis
Neut_0294	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
Neut_0294	PWY-6148	tetrahydromethanopterin biosynthesis
Neut_0294	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
Neut_0294	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
Neut_0309	PWY-7206	pyrimidine deoxyribonucleotides dephosphorylation
Neut_0323	PWY-6891	thiazole biosynthesis II (Bacillus)
Neut_0323	PWY-6892	thiazole biosynthesis I (E. coli)
Neut_0333	PWY-1042	glycolysis IV (plant cytosol)
Neut_0333	PWY-5484	glycolysis II (from fructose 6-phosphate)
Neut_0333	PWY-6901	superpathway of glucose and xylose degradation
Neut_0333	PWY-7003	glycerol degradation to butanol
Neut_0381	PWY-6164	3-dehydroquinate biosynthesis I
Neut_0382	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Neut_0386	PWY-2781	<i>cis</i>-zeatin biosynthesis
Neut_0398	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Neut_0399	PWY-7205	CMP phosphorylation
Neut_0402	PWY-5686	UMP biosynthesis
Neut_0404	PWY-2941	L-lysine biosynthesis II
Neut_0404	PWY-2942	L-lysine biosynthesis III
Neut_0404	PWY-5097	L-lysine biosynthesis VI
Neut_0407	PWY-2301	<i>myo</i>-inositol biosynthesis
Neut_0407	PWY-4702	phytate degradation I
Neut_0407	PWY-6363	D-<i>myo</i>-inositol (1,4,5)-trisphosphate degradation
Neut_0410	PWY-6123	inosine-5'-phosphate biosynthesis I
Neut_0410	PWY-6124	inosine-5'-phosphate biosynthesis II
Neut_0410	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Neut_0410	PWY-7234	inosine-5'-phosphate biosynthesis III
Neut_0424	PWY-5344	L-homocysteine biosynthesis
Neut_0424	PWY-7174	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation II
Neut_0427	PWY-2723	trehalose degradation V
Neut_0427	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
Neut_0427	PWY-5661	GDP-glucose biosynthesis
Neut_0427	PWY-7238	sucrose biosynthesis II
Neut_0427	PWY-7385	1,3-propanediol biosynthesis (engineered)
Neut_0430	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
Neut_0430	PWY-6855	chitin degradation I (archaea)
Neut_0430	PWY-6906	chitin derivatives degradation
Neut_0435	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
Neut_0435	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
Neut_0443	PWY-6829	tRNA methylation (yeast)
Neut_0443	PWY-7285	methylwyosine biosynthesis
Neut_0443	PWY-7286	7-(3-amino-3-carboxypropyl)-wyosine biosynthesis
Neut_0451	PWY-5686	UMP biosynthesis
Neut_0452	PWY-5686	UMP biosynthesis
Neut_0454	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Neut_0454	PWY-5686	UMP biosynthesis
Neut_0454	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Neut_0455	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Neut_0455	PWY-5686	UMP biosynthesis
Neut_0455	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Neut_0468	PWY-5367	petroselinate biosynthesis
Neut_0468	PWY-5971	palmitate biosynthesis II (bacteria and plants)
Neut_0468	PWY-5973	<i>cis</i>-vaccenate biosynthesis
Neut_0468	PWY-5989	stearate biosynthesis II (bacteria and plants)
Neut_0468	PWY-5994	palmitate biosynthesis I (animals and fungi)
Neut_0468	PWY-6113	superpathway of mycolate biosynthesis
Neut_0468	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
Neut_0468	PWY-6519	8-amino-7-oxononanoate biosynthesis I
Neut_0468	PWY-6951	Neut_0468|Neut_0468|YP_746710.1|GeneID:4273427
Neut_0468	PWY-7053	docosahexaenoate biosynthesis I (lower eukaryotes)
Neut_0468	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Neut_0468	PWYG-321	mycolate biosynthesis
Neut_0469	PWY-4381	fatty acid biosynthesis initiation I
Neut_0469	PWY-6799	fatty acid biosynthesis (plant mitochondria)
Neut_0469	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Neut_0470	PWY-4381	fatty acid biosynthesis initiation I
Neut_0496	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Neut_0499	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Neut_0500	PWY-2201	folate transformations I
Neut_0500	PWY-3841	folate transformations II
Neut_0505	PWY-2941	L-lysine biosynthesis II
Neut_0505	PWY-5097	L-lysine biosynthesis VI
Neut_0520	PWY-3781	aerobic respiration I (cytochrome c)
Neut_0520	PWY-4521	arsenite oxidation I (respiratory)
Neut_0520	PWY-6692	Fe(II) oxidation
Neut_0520	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Neut_0528	PWY-5344	L-homocysteine biosynthesis
Neut_0536	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
Neut_0536	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Neut_0536	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
Neut_0536	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
Neut_0536	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
Neut_0536	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
Neut_0599	PWY-5988	wound-induced proteolysis I
Neut_0599	PWY-6018	seed germination protein turnover
Neut_0603	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
Neut_0603	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
Neut_0605	PWY-5392	reductive TCA cycle II
Neut_0605	PWY-5537	pyruvate fermentation to acetate V
Neut_0605	PWY-5538	pyruvate fermentation to acetate VI
Neut_0605	PWY-5690	TCA cycle II (plants and fungi)
Neut_0605	PWY-5913	TCA cycle VI (obligate autotrophs)
Neut_0605	PWY-6728	methylaspartate cycle
Neut_0605	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Neut_0605	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Neut_0606	PWY-5392	reductive TCA cycle II
Neut_0606	PWY-5537	pyruvate fermentation to acetate V
Neut_0606	PWY-5538	pyruvate fermentation to acetate VI
Neut_0606	PWY-5690	TCA cycle II (plants and fungi)
Neut_0606	PWY-5913	TCA cycle VI (obligate autotrophs)
Neut_0606	PWY-6728	methylaspartate cycle
Neut_0606	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Neut_0606	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Neut_0608	PWY-622	starch biosynthesis
Neut_0609	PWY-3801	sucrose degradation II (sucrose synthase)
Neut_0609	PWY-5054	sorbitol biosynthesis I
Neut_0609	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
Neut_0609	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
Neut_0609	PWY-5659	GDP-mannose biosynthesis
Neut_0609	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Neut_0609	PWY-621	sucrose degradation III (sucrose invertase)
Neut_0609	PWY-622	starch biosynthesis
Neut_0609	PWY-6531	mannitol cycle
Neut_0609	PWY-6981	chitin biosynthesis
Neut_0609	PWY-7238	sucrose biosynthesis II
Neut_0609	PWY-7347	sucrose biosynthesis III
Neut_0609	PWY-7385	1,3-propanediol biosynthesis (engineered)
Neut_0614	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
Neut_0618	PWY-5659	GDP-mannose biosynthesis
Neut_0618	PWY-6073	alginate biosynthesis I (algal)
Neut_0618	PWY-6082	alginate biosynthesis II (bacterial)
Neut_0618	PWY-882	L-ascorbate biosynthesis I (L-galactose pathway)
Neut_0619	PWY-7335	UDP-<i>N</i>-acetyl-&alpha;-D-mannosaminouronate biosynthesis
Neut_0635	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Neut_0635	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Neut_0646	PWY-5686	UMP biosynthesis
Neut_0653	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
Neut_0653	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
Neut_0653	PWY-6897	thiamin salvage II
Neut_0653	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
Neut_0653	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
Neut_0653	PWY-7353	4-methyl-5(&beta;-hydroxyethyl)thiazole salvage (yeast)
Neut_0653	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
Neut_0655	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Neut_0660	PWY-5667	CDP-diacylglycerol biosynthesis I
Neut_0660	PWY-5981	CDP-diacylglycerol biosynthesis III
Neut_0663	PWY-5971	palmitate biosynthesis II (bacteria and plants)
Neut_0663	PWY-5973	<i>cis</i>-vaccenate biosynthesis
Neut_0663	PWY-5989	stearate biosynthesis II (bacteria and plants)
Neut_0663	PWY-6113	superpathway of mycolate biosynthesis
Neut_0663	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
Neut_0663	PWY-6519	8-amino-7-oxononanoate biosynthesis I
Neut_0663	PWY-7096	triclosan resistance
Neut_0663	PWYG-321	mycolate biosynthesis
Neut_0684	PWY-7153	grixazone biosynthesis
Neut_0696	PWY-3781	aerobic respiration I (cytochrome c)
Neut_0696	PWY-4521	arsenite oxidation I (respiratory)
Neut_0696	PWY-6692	Fe(II) oxidation
Neut_0696	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Neut_0698	PWY-3801	sucrose degradation II (sucrose synthase)
Neut_0698	PWY-6527	stachyose degradation
Neut_0698	PWY-6981	chitin biosynthesis
Neut_0698	PWY-7238	sucrose biosynthesis II
Neut_0698	PWY-7343	UDP-glucose biosynthesis
Neut_0717	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
Neut_0724	PWY-1361	benzoyl-CoA degradation I (aerobic)
Neut_0724	PWY-5109	2-methylbutanoate biosynthesis
Neut_0724	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
Neut_0724	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
Neut_0724	PWY-5177	glutaryl-CoA degradation
Neut_0724	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Neut_0724	PWY-6435	4-hydroxybenzoate biosynthesis V
Neut_0724	PWY-6583	pyruvate fermentation to butanol I
Neut_0724	PWY-6863	pyruvate fermentation to hexanol
Neut_0724	PWY-6883	pyruvate fermentation to butanol II
Neut_0724	PWY-6944	androstenedione degradation
Neut_0724	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
Neut_0724	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
Neut_0724	PWY-7007	methyl ketone biosynthesis
Neut_0724	PWY-7046	4-coumarate degradation (anaerobic)
Neut_0724	PWY-7094	fatty acid salvage
Neut_0724	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
Neut_0724	PWY-735	jasmonic acid biosynthesis
Neut_0724	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
Neut_0733	PWY-2941	L-lysine biosynthesis II
Neut_0733	PWY-2942	L-lysine biosynthesis III
Neut_0733	PWY-5097	L-lysine biosynthesis VI
Neut_0742	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Neut_0757	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
Neut_0757	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
Neut_0757	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
Neut_0758	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
Neut_0758	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
Neut_0761	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
Neut_0761	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
Neut_0764	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Neut_0764	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Neut_0768	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
Neut_0768	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
Neut_0768	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
Neut_0772	PWY-5723	Rubisco shunt
Neut_0775	PWY-702	L-methionine biosynthesis II
Neut_0784	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
Neut_0784	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Neut_0784	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
Neut_0784	PWY-7206	pyrimidine deoxyribonucleotides dephosphorylation
Neut_0787	PWY-1042	glycolysis IV (plant cytosol)
Neut_0787	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Neut_0787	PWY-5484	glycolysis II (from fructose 6-phosphate)
Neut_0787	PWY-6531	mannitol cycle
Neut_0787	PWY-7385	1,3-propanediol biosynthesis (engineered)
Neut_0804	PWY-5532	adenosine nucleotides degradation IV
Neut_0804	PWY-5723	Rubisco shunt
Neut_0805	PWY-5532	adenosine nucleotides degradation IV
Neut_0805	PWY-5723	Rubisco shunt
Neut_0813	PWY-7158	L-phenylalanine degradation V
Neut_0826	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Neut_0837	PWY-6936	seleno-amino acid biosynthesis
Neut_0859	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
Neut_0860	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
Neut_0863	PWY-3781	aerobic respiration I (cytochrome c)
Neut_0863	PWY-4302	aerobic respiration III (alternative oxidase pathway)
Neut_0863	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
Neut_0863	PWY-5690	TCA cycle II (plants and fungi)
Neut_0863	PWY-6728	methylaspartate cycle
Neut_0863	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Neut_0863	PWY-7254	TCA cycle VII (acetate-producers)
Neut_0863	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Neut_0868	PWY-5484	glycolysis II (from fructose 6-phosphate)
Neut_0871	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Neut_0876	PWY-6785	hydrogen production VIII
Neut_0907	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Neut_0907	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Neut_0908	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Neut_0908	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Neut_0919	PWY-1622	formaldehyde assimilation I (serine pathway)
Neut_0919	PWY-5484	glycolysis II (from fructose 6-phosphate)
Neut_0920	PWY-1042	glycolysis IV (plant cytosol)
Neut_0920	PWY-5484	glycolysis II (from fructose 6-phosphate)
Neut_0920	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Neut_0920	PWY-7003	glycerol degradation to butanol
Neut_0934	PWY-3781	aerobic respiration I (cytochrome c)
Neut_0934	PWY-4302	aerobic respiration III (alternative oxidase pathway)
Neut_0934	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
Neut_0934	PWY-6692	Fe(II) oxidation
Neut_0951	PWY-6825	phosphatidylcholine biosynthesis V
Neut_0967	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Neut_0979	PWY-1042	glycolysis IV (plant cytosol)
Neut_0979	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
Neut_0979	PWY-5484	glycolysis II (from fructose 6-phosphate)
Neut_0979	PWY-5723	Rubisco shunt
Neut_0979	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Neut_0979	PWY-6886	1-butanol autotrophic biosynthesis
Neut_0979	PWY-6901	superpathway of glucose and xylose degradation
Neut_0979	PWY-7003	glycerol degradation to butanol
Neut_0979	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
Neut_0979	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
Neut_0999	PWY-6614	tetrahydrofolate biosynthesis
Neut_1000	PWY-6749	CMP-legionaminate biosynthesis I
Neut_1002	PWY-5194	siroheme biosynthesis
Neut_1002	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
Neut_1020	PWY-3841	folate transformations II
Neut_1020	PWY-6614	tetrahydrofolate biosynthesis
Neut_1021	PWY-3841	folate transformations II
Neut_1021	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Neut_1021	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
Neut_1021	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
Neut_1021	PWY-7199	pyrimidine deoxyribonucleosides salvage
Neut_1021	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
Neut_1022	PWY-5988	wound-induced proteolysis I
Neut_1022	PWY-6018	seed germination protein turnover
Neut_1036	PWY-1622	formaldehyde assimilation I (serine pathway)
Neut_1036	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
Neut_1036	PWY-5913	TCA cycle VI (obligate autotrophs)
Neut_1036	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Neut_1036	PWY-6146	<i>Methanobacterium thermoautotrophicum</i> biosynthetic metabolism
Neut_1036	PWY-6549	L-glutamine biosynthesis III
Neut_1036	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
Neut_1036	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
Neut_1036	PWY-7124	ethylene biosynthesis V (engineered)
Neut_1037	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Neut_1037	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
Neut_1038	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Neut_1038	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
Neut_1048	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Neut_1059	PWY-5839	menaquinol-7 biosynthesis
Neut_1059	PWY-5844	menaquinol-9 biosynthesis
Neut_1059	PWY-5849	menaquinol-6 biosynthesis
Neut_1059	PWY-5890	menaquinol-10 biosynthesis
Neut_1059	PWY-5891	menaquinol-11 biosynthesis
Neut_1059	PWY-5892	menaquinol-12 biosynthesis
Neut_1059	PWY-5895	menaquinol-13 biosynthesis
Neut_1079	PWY-3801	sucrose degradation II (sucrose synthase)
Neut_1093	PWY-7346	UDP-&alpha;-D-glucuronate biosynthesis (from UDP-glucose)
Neut_1110	PWY-3781	aerobic respiration I (cytochrome c)
Neut_1110	PWY-6692	Fe(II) oxidation
Neut_1110	PWY-7082	ammonia oxidation IV (autotrophic ammonia oxidizers)
Neut_1110	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Neut_1129	PWY-5755	4-hydroxybenzoate biosynthesis II (microbes)
Neut_1129	PWY-5870	ubiquinol-8 biosynthesis (eukaryotic)
Neut_1129	PWY-6148	tetrahydromethanopterin biosynthesis
Neut_1139	PWY-7560	methylerythritol phosphate pathway II
Neut_1147	PWY-7396	butanol and isobutanol biosynthesis (engineered)
Neut_1148	PWY-2941	L-lysine biosynthesis II
Neut_1148	PWY-2942	L-lysine biosynthesis III
Neut_1148	PWY-5097	L-lysine biosynthesis VI
Neut_1148	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Neut_1148	PWY-6559	spermidine biosynthesis II
Neut_1148	PWY-6562	norspermidine biosynthesis
Neut_1148	PWY-7153	grixazone biosynthesis
Neut_1148	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Neut_1154	PWY-4381	fatty acid biosynthesis initiation I
Neut_1154	PWY-5743	3-hydroxypropanoate cycle
Neut_1154	PWY-5744	glyoxylate assimilation
Neut_1154	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Neut_1154	PWY-6679	jadomycin biosynthesis
Neut_1154	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Neut_1155	PWY-2161	folate polyglutamylation
Neut_1158	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Neut_1158	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
Neut_1158	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
Neut_1158	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
Neut_1176	PWY-5484	glycolysis II (from fructose 6-phosphate)
Neut_1177	PWY-4061	glutathione-mediated detoxification I
Neut_1177	PWY-6842	glutathione-mediated detoxification II
Neut_1177	PWY-7112	4-hydroxy-2-nonenal detoxification
Neut_1177	PWY-7533	gliotoxin biosynthesis
Neut_1184	PWY-6683	sulfate reduction III (assimilatory)
Neut_1185	PWY-6683	sulfate reduction III (assimilatory)
Neut_1188	PWY-5278	sulfite oxidation III
Neut_1188	PWY-5340	sulfate activation for sulfonation
Neut_1188	PWY-6683	sulfate reduction III (assimilatory)
Neut_1188	PWY-6932	selenate reduction
Neut_1189	PWY-5278	sulfite oxidation III
Neut_1189	PWY-5340	sulfate activation for sulfonation
Neut_1189	PWY-6683	sulfate reduction III (assimilatory)
Neut_1189	PWY-6932	selenate reduction
Neut_1200	PWY-6123	inosine-5'-phosphate biosynthesis I
Neut_1200	PWY-6124	inosine-5'-phosphate biosynthesis II
Neut_1200	PWY-7234	inosine-5'-phosphate biosynthesis III
Neut_1202	PWY-6123	inosine-5'-phosphate biosynthesis I
Neut_1202	PWY-7234	inosine-5'-phosphate biosynthesis III
Neut_1204	PWY-6854	ethylene biosynthesis III (microbes)
Neut_1210	PWY-6123	inosine-5'-phosphate biosynthesis I
Neut_1210	PWY-6124	inosine-5'-phosphate biosynthesis II
Neut_1210	PWY-7234	inosine-5'-phosphate biosynthesis III
Neut_1211	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Neut_1211	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
Neut_1211	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
Neut_1231	PWY-381	nitrate reduction II (assimilatory)
Neut_1231	PWY-5675	nitrate reduction V (assimilatory)
Neut_1231	PWY-6549	L-glutamine biosynthesis III
Neut_1231	PWY-6963	ammonia assimilation cycle I
Neut_1231	PWY-6964	ammonia assimilation cycle II
Neut_1238	PWY-6823	molybdenum cofactor biosynthesis
Neut_1238	PWY-6891	thiazole biosynthesis II (Bacillus)
Neut_1238	PWY-6892	thiazole biosynthesis I (E. coli)
Neut_1238	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
Neut_1244	PWY-6871	3-methylbutanol biosynthesis
Neut_1258	PWY-5669	phosphatidylethanolamine biosynthesis I
Neut_1259	PWY-5669	phosphatidylethanolamine biosynthesis I
Neut_1260	PWY-5101	L-isoleucine biosynthesis II
Neut_1260	PWY-5103	L-isoleucine biosynthesis III
Neut_1260	PWY-5104	L-isoleucine biosynthesis IV
Neut_1260	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Neut_1261	PWY-5101	L-isoleucine biosynthesis II
Neut_1261	PWY-5103	L-isoleucine biosynthesis III
Neut_1261	PWY-5104	L-isoleucine biosynthesis IV
Neut_1261	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
Neut_1261	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
Neut_1261	PWY-6389	(<i>S</i>)-acetoin biosynthesis
Neut_1261	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Neut_1262	PWY-5101	L-isoleucine biosynthesis II
Neut_1262	PWY-5103	L-isoleucine biosynthesis III
Neut_1262	PWY-5104	L-isoleucine biosynthesis IV
Neut_1262	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
Neut_1262	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
Neut_1262	PWY-6389	(<i>S</i>)-acetoin biosynthesis
Neut_1262	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Neut_1269	PWY-4983	L-citrulline-nitric oxide cycle
Neut_1269	PWY-4984	urea cycle
Neut_1269	PWY-5	canavanine biosynthesis
Neut_1269	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Neut_1269	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Neut_1291	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
Neut_1291	PWY-622	starch biosynthesis
Neut_1292	PWY-622	starch biosynthesis
Neut_1300	PWY-7560	methylerythritol phosphate pathway II
Neut_1338	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
Neut_1338	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
Neut_1338	PWY-6164	3-dehydroquinate biosynthesis I
Neut_1385	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
Neut_1385	PWY-3162	L-tryptophan degradation V (side chain pathway)
Neut_1385	PWY-5057	L-valine degradation II
Neut_1385	PWY-5076	L-leucine degradation III
Neut_1385	PWY-5078	L-isoleucine degradation II
Neut_1385	PWY-5079	L-phenylalanine degradation III
Neut_1385	PWY-5082	L-methionine degradation III
Neut_1385	PWY-5480	pyruvate fermentation to ethanol I
Neut_1385	PWY-5486	pyruvate fermentation to ethanol II
Neut_1385	PWY-5751	phenylethanol biosynthesis
Neut_1385	PWY-6028	acetoin degradation
Neut_1385	PWY-6313	serotonin degradation
Neut_1385	PWY-6333	acetaldehyde biosynthesis I
Neut_1385	PWY-6342	noradrenaline and adrenaline degradation
Neut_1385	PWY-6587	pyruvate fermentation to ethanol III
Neut_1385	PWY-6802	salidroside biosynthesis
Neut_1385	PWY-6871	3-methylbutanol biosynthesis
Neut_1385	PWY-7013	L-1,2-propanediol degradation
Neut_1385	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Neut_1385	PWY-7118	chitin degradation to ethanol
Neut_1385	PWY-7396	butanol and isobutanol biosynthesis (engineered)
Neut_1385	PWY-7557	dehydrodiconiferyl alcohol degradation
Neut_1386	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
Neut_1401	PWY-7052	cyanophycin metabolism
Neut_1402	PWY-7052	cyanophycin metabolism
Neut_1403	PWY-6523	nitrite-dependent anaerobic methane oxidation
Neut_1403	PWY-6748	nitrate reduction VII (denitrification)
Neut_1403	PWY-7084	nitrifier denitrification
Neut_1430	PWY-6700	queuosine biosynthesis
Neut_1431	PWY-6700	queuosine biosynthesis
Neut_1436	PWY-5839	menaquinol-7 biosynthesis
Neut_1436	PWY-5844	menaquinol-9 biosynthesis
Neut_1436	PWY-5849	menaquinol-6 biosynthesis
Neut_1436	PWY-5890	menaquinol-10 biosynthesis
Neut_1436	PWY-5891	menaquinol-11 biosynthesis
Neut_1436	PWY-5892	menaquinol-12 biosynthesis
Neut_1436	PWY-5895	menaquinol-13 biosynthesis
Neut_1437	PWY-40	putrescine biosynthesis I
Neut_1437	PWY-6305	putrescine biosynthesis IV
Neut_1440	PWY-5523	5,6-dimethylbenzimidazole biosynthesis
Neut_1440	PWY-6167	flavin biosynthesis II (archaea)
Neut_1440	PWY-6168	flavin biosynthesis III (fungi)
Neut_1501	PWY-6891	thiazole biosynthesis II (Bacillus)
Neut_1501	PWY-6892	thiazole biosynthesis I (E. coli)
Neut_1501	PWY-7560	methylerythritol phosphate pathway II
Neut_1502	PWY-5663	tetrahydrobiopterin biosynthesis I
Neut_1502	PWY-5664	tetrahydrobiopterin biosynthesis II
Neut_1502	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
Neut_1502	PWY-6703	preQ<sub>0</sub> biosynthesis
Neut_1502	PWY-6983	tetrahydrobiopterin biosynthesis III
Neut_1502	PWY-7442	drosopterin and aurodrosopterin biosynthesis
Neut_1507	PWY-6098	diploterol and cycloartenol biosynthesis
Neut_1507	PWY-7072	hopanoid biosynthesis (bacteria)
Neut_1525	PWY-7560	methylerythritol phosphate pathway II
Neut_1531	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
Neut_1537	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Neut_1538	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
Neut_1538	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
Neut_1538	PWY-6897	thiamin salvage II
Neut_1538	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
Neut_1538	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
Neut_1538	PWY-7353	4-methyl-5(&beta;-hydroxyethyl)thiazole salvage (yeast)
Neut_1538	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
Neut_1541	PWY-5386	methylglyoxal degradation I
Neut_1548	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
Neut_1548	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
Neut_1552	PWY-1622	formaldehyde assimilation I (serine pathway)
Neut_1552	PWY-181	photorespiration
Neut_1552	PWY-2161	folate polyglutamylation
Neut_1552	PWY-2201	folate transformations I
Neut_1552	PWY-3661	glycine betaine degradation I
Neut_1552	PWY-3661-1	glycine betaine degradation II (mammalian)
Neut_1552	PWY-3841	folate transformations II
Neut_1552	PWY-5497	purine nucleobases degradation II (anaerobic)
Neut_1555	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
Neut_1555	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
Neut_1555	PWY-6936	seleno-amino acid biosynthesis
Neut_1555	PWY-702	L-methionine biosynthesis II
Neut_1556	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Neut_1556	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Neut_1568	PWY-7303	3-dimethylallyl-4-hydroxybenzoate biosynthesis
Neut_1570	PWY-3461	L-tyrosine biosynthesis II
Neut_1570	PWY-3462	L-phenylalanine biosynthesis II
Neut_1570	PWY-6120	L-tyrosine biosynthesis III
Neut_1570	PWY-6627	salinosporamide A biosynthesis
Neut_1570	PWY-7432	L-phenylalanine biosynthesis III (cytosolic, plants)
Neut_1577	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Neut_1577	PWY-5723	Rubisco shunt
Neut_1577	PWY-6891	thiazole biosynthesis II (Bacillus)
Neut_1577	PWY-6892	thiazole biosynthesis I (E. coli)
Neut_1577	PWY-6901	superpathway of glucose and xylose degradation
Neut_1577	PWY-7560	methylerythritol phosphate pathway II
Neut_1578	PWY-1042	glycolysis IV (plant cytosol)
Neut_1578	PWY-5484	glycolysis II (from fructose 6-phosphate)
Neut_1578	PWY-6901	superpathway of glucose and xylose degradation
Neut_1578	PWY-7003	glycerol degradation to butanol
Neut_1579	PWY-1042	glycolysis IV (plant cytosol)
Neut_1579	PWY-5484	glycolysis II (from fructose 6-phosphate)
Neut_1579	PWY-6886	1-butanol autotrophic biosynthesis
Neut_1579	PWY-6901	superpathway of glucose and xylose degradation
Neut_1579	PWY-7003	glycerol degradation to butanol
Neut_1580	PWY-1042	glycolysis IV (plant cytosol)
Neut_1580	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
Neut_1580	PWY-5484	glycolysis II (from fructose 6-phosphate)
Neut_1580	PWY-5723	Rubisco shunt
Neut_1580	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Neut_1580	PWY-6886	1-butanol autotrophic biosynthesis
Neut_1580	PWY-6901	superpathway of glucose and xylose degradation
Neut_1580	PWY-7003	glycerol degradation to butanol
Neut_1580	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
Neut_1580	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
Neut_1581	PWY-1042	glycolysis IV (plant cytosol)
Neut_1581	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Neut_1581	PWY-5484	glycolysis II (from fructose 6-phosphate)
Neut_1581	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Neut_1581	PWY-7385	1,3-propanediol biosynthesis (engineered)
Neut_1582	PWY-3781	aerobic respiration I (cytochrome c)
Neut_1582	PWY-4521	arsenite oxidation I (respiratory)
Neut_1582	PWY-6692	Fe(II) oxidation
Neut_1582	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Neut_1594	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
Neut_1607	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
Neut_1607	PWY-2201	folate transformations I
Neut_1607	PWY-3841	folate transformations II
Neut_1607	PWY-5030	L-histidine degradation III
Neut_1607	PWY-5497	purine nucleobases degradation II (anaerobic)
Neut_1607	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
Neut_1608	PWY-6891	thiazole biosynthesis II (Bacillus)
Neut_1608	PWY-6892	thiazole biosynthesis I (E. coli)
Neut_1608	PWY-7560	methylerythritol phosphate pathway II
Neut_1610	PWY-5381	pyridine nucleotide cycling (plants)
Neut_1610	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
Neut_1628	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
Neut_1628	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Neut_1628	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
Neut_1628	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
Neut_1633	PWY-1622	formaldehyde assimilation I (serine pathway)
Neut_1633	PWY-5392	reductive TCA cycle II
Neut_1633	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
Neut_1633	PWY-5690	TCA cycle II (plants and fungi)
Neut_1633	PWY-5913	TCA cycle VI (obligate autotrophs)
Neut_1633	PWY-6728	methylaspartate cycle
Neut_1633	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Neut_1633	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
Neut_1633	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
Neut_1654	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
Neut_1656	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Neut_1656	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Neut_1659	PWY-5686	UMP biosynthesis
Neut_1670	PWY-5674	nitrate reduction IV (dissimilatory)
Neut_1672	PWY-7082	ammonia oxidation IV (autotrophic ammonia oxidizers)
Neut_1672	PWY-7084	nitrifier denitrification
Neut_1686	PWY-5663	tetrahydrobiopterin biosynthesis I
Neut_1686	PWY-5664	tetrahydrobiopterin biosynthesis II
Neut_1686	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
Neut_1686	PWY-6703	preQ<sub>0</sub> biosynthesis
Neut_1686	PWY-6983	tetrahydrobiopterin biosynthesis III
Neut_1686	PWY-7442	drosopterin and aurodrosopterin biosynthesis
Neut_1690	PWY-6672	<i>cis</i>-genanyl-CoA degradation
Neut_1690	PWY-7118	chitin degradation to ethanol
Neut_1752	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Neut_1752	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Neut_1770	PWY-4261	glycerol degradation I
Neut_1770	PWY-6118	glycerol-3-phosphate shuttle
Neut_1770	PWY-6952	glycerophosphodiester degradation
Neut_1773	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
Neut_1773	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
Neut_1774	PWY-6902	chitin degradation II
Neut_1775	PWY-6012	acyl carrier protein metabolism I
Neut_1775	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
Neut_1791	PWY-5674	nitrate reduction IV (dissimilatory)
Neut_1793	PWY-7082	ammonia oxidation IV (autotrophic ammonia oxidizers)
Neut_1793	PWY-7084	nitrifier denitrification
Neut_1829	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Neut_1829	PWY-5723	Rubisco shunt
Neut_1843	PWY-4041	&gamma;-glutamyl cycle
Neut_1843	PWY-5826	hypoglycin biosynthesis
Neut_1859	PWY-5737	(5<i>R</i>)-carbapenem carboxylate biosynthesis
Neut_1859	PWY-6853	ethylene biosynthesis II (microbes)
Neut_1859	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
Neut_1875	PWY-3781	aerobic respiration I (cytochrome c)
Neut_1875	PWY-4521	arsenite oxidation I (respiratory)
Neut_1875	PWY-6692	Fe(II) oxidation
Neut_1875	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Neut_1879	PWY-3821	galactose degradation III
Neut_1879	PWY-6317	galactose degradation I (Leloir pathway)
Neut_1879	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
Neut_1879	PWY-6527	stachyose degradation
Neut_1879	PWY-7328	superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
Neut_1879	PWY-7344	UDP-D-galactose biosynthesis
Neut_1880	PWY-3221	dTDP-L-rhamnose biosynthesis II
Neut_1880	PWY-6808	dTDP-D-forosamine biosynthesis
Neut_1880	PWY-6942	dTDP-D-desosamine biosynthesis
Neut_1880	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
Neut_1880	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
Neut_1880	PWY-6974	dTDP-L-olivose biosynthesis
Neut_1880	PWY-6976	dTDP-L-mycarose biosynthesis
Neut_1880	PWY-7104	dTDP-L-megosamine biosynthesis
Neut_1880	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
Neut_1880	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
Neut_1880	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
Neut_1880	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
Neut_1880	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
Neut_1880	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
Neut_1880	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
Neut_1880	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
Neut_1882	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Neut_1882	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Neut_1883	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Neut_1883	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Neut_1886	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
Neut_1886	PWY-6153	autoinducer AI-2 biosynthesis I
Neut_1886	PWY-6154	autoinducer AI-2 biosynthesis II (<i>Vibrio</i>)
Neut_1891	PWY-2201	folate transformations I
Neut_1891	PWY-3841	folate transformations II
Neut_1892	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
Neut_1893	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
Neut_1893	PWY-5912	2'-deoxymugineic acid phytosiderophore biosynthesis
Neut_1901	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Neut_1901	PWY-6416	quinate degradation II
Neut_1901	PWY-6707	gallate biosynthesis
Neut_1903	PWY-7560	methylerythritol phosphate pathway II
Neut_1918	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
Neut_1918	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
Neut_1918	PWY-6268	adenosylcobalamin salvage from cobalamin
Neut_1918	PWY-6269	adenosylcobalamin salvage from cobinamide II
Neut_1923	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
Neut_1940	PWY-2941	L-lysine biosynthesis II
Neut_1940	PWY-2942	L-lysine biosynthesis III
Neut_1940	PWY-5097	L-lysine biosynthesis VI
Neut_1956	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
Neut_1956	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
Neut_1957	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Neut_1969	PWY-5506	methanol oxidation to formaldehyde IV
Neut_1982	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
Neut_1982	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
Neut_1982	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
Neut_1982	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
Neut_1995	PWY-1281	sulfoacetaldehyde degradation I
Neut_1995	PWY-5482	pyruvate fermentation to acetate II
Neut_1995	PWY-5485	pyruvate fermentation to acetate IV
Neut_1995	PWY-5497	purine nucleobases degradation II (anaerobic)
Neut_1995	PWY-6637	sulfolactate degradation II
Neut_1996	PWY-1042	glycolysis IV (plant cytosol)
Neut_1996	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Neut_1996	PWY-5484	glycolysis II (from fructose 6-phosphate)
Neut_1996	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Neut_1996	PWY-7385	1,3-propanediol biosynthesis (engineered)
Neut_2004	PWY-5316	nicotine biosynthesis
Neut_2004	PWY-7342	superpathway of nicotine biosynthesis
Neut_2005	PWY-5057	L-valine degradation II
Neut_2005	PWY-5076	L-leucine degradation III
Neut_2005	PWY-5078	L-isoleucine degradation II
Neut_2005	PWY-5101	L-isoleucine biosynthesis II
Neut_2005	PWY-5103	L-isoleucine biosynthesis III
Neut_2005	PWY-5104	L-isoleucine biosynthesis IV
Neut_2005	PWY-5108	L-isoleucine biosynthesis V
Neut_2007	PWY-6749	CMP-legionaminate biosynthesis I
Neut_2013	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Neut_2020	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Neut_2025	PWY-5971	palmitate biosynthesis II (bacteria and plants)
Neut_2025	PWY-5973	<i>cis</i>-vaccenate biosynthesis
Neut_2025	PWY-5989	stearate biosynthesis II (bacteria and plants)
Neut_2025	PWY-5994	palmitate biosynthesis I (animals and fungi)
Neut_2025	PWY-6113	superpathway of mycolate biosynthesis
Neut_2025	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
Neut_2025	PWY-6519	8-amino-7-oxononanoate biosynthesis I
Neut_2025	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Neut_2025	PWYG-321	mycolate biosynthesis
Neut_2029	PWY-7560	methylerythritol phosphate pathway II
Neut_2045	PWY-5913	TCA cycle VI (obligate autotrophs)
Neut_2045	PWY-6549	L-glutamine biosynthesis III
Neut_2045	PWY-6728	methylaspartate cycle
Neut_2045	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Neut_2045	PWY-7124	ethylene biosynthesis V (engineered)
Neut_2045	PWY-7254	TCA cycle VII (acetate-producers)
Neut_2045	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
Neut_2050	PWY-5686	UMP biosynthesis
Neut_2054	PWY-5941	glycogen degradation II (eukaryotic)
Neut_2054	PWY-622	starch biosynthesis
Neut_2054	PWY-6731	starch degradation III
Neut_2054	PWY-6737	starch degradation V
Neut_2054	PWY-7238	sucrose biosynthesis II
Neut_2065	PWY-4983	L-citrulline-nitric oxide cycle
Neut_2065	PWY-4984	urea cycle
Neut_2065	PWY-5	canavanine biosynthesis
Neut_2065	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Neut_2065	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Neut_2066	PWY-4981	L-proline biosynthesis II (from arginine)
Neut_2066	PWY-4984	urea cycle
Neut_2066	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Neut_2071	PWY-6936	seleno-amino acid biosynthesis
Neut_2079	PWY-5269	cardiolipin biosynthesis II
Neut_2079	PWY-5668	cardiolipin biosynthesis I
Neut_2080	PWY-4261	glycerol degradation I
Neut_2084	PWY-2941	L-lysine biosynthesis II
Neut_2084	PWY-2942	L-lysine biosynthesis III
Neut_2084	PWY-5097	L-lysine biosynthesis VI
Neut_2084	PWY-6559	spermidine biosynthesis II
Neut_2084	PWY-6562	norspermidine biosynthesis
Neut_2084	PWY-7153	grixazone biosynthesis
Neut_2086	PWY-5482	pyruvate fermentation to acetate II
Neut_2086	PWY-5485	pyruvate fermentation to acetate IV
Neut_2086	PWY-5497	purine nucleobases degradation II (anaerobic)
Neut_2089	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Neut_2089	PWY-5723	Rubisco shunt
Neut_2096	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Neut_2096	PWY-5723	Rubisco shunt
Neut_2097	PWY-181	photorespiration
Neut_2098	PWY-5958	acridone alkaloid biosynthesis
Neut_2098	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
Neut_2098	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
Neut_2103	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
Neut_2103	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
Neut_2121	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
Neut_2121	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
Neut_2121	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
Neut_2123	PWY-6700	queuosine biosynthesis
Neut_2124	PWY-5392	reductive TCA cycle II
Neut_2124	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
Neut_2124	PWY-5690	TCA cycle II (plants and fungi)
Neut_2124	PWY-5913	TCA cycle VI (obligate autotrophs)
Neut_2124	PWY-6728	methylaspartate cycle
Neut_2124	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Neut_2124	PWY-7254	TCA cycle VII (acetate-producers)
Neut_2124	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Neut_2134	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
Neut_2135	PWY-6519	8-amino-7-oxononanoate biosynthesis I
Neut_2136	PWY-6519	8-amino-7-oxononanoate biosynthesis I
Neut_2137	PWY-6519	8-amino-7-oxononanoate biosynthesis I
Neut_2137	PWY-6578	8-amino-7-oxononanoate biosynthesis III
Neut_2137	PWY-7147	8-amino-7-oxononanoate biosynthesis II
Neut_2138	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
Neut_2143	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
Neut_2148	PWY-3341	L-proline biosynthesis III
Neut_2148	PWY-4981	L-proline biosynthesis II (from arginine)
Neut_2148	PWY-6344	L-ornithine degradation II (Stickland reaction)
Neut_2162	PWY-6482	diphthamide biosynthesis (archaea)
Neut_2162	PWY-7546	diphthamide biosynthesis (eukaryotes)
Neut_2168	PWY-7560	methylerythritol phosphate pathway II
Neut_2172	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
Neut_2172	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
Neut_2172	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Neut_2172	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
Neut_2172	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
Neut_2172	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
Neut_2172	PWY-7205	CMP phosphorylation
Neut_2172	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
Neut_2172	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Neut_2172	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
Neut_2172	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Neut_2172	PWY-7224	purine deoxyribonucleosides salvage
Neut_2172	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
Neut_2172	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
Neut_2178	PWY-5386	methylglyoxal degradation I
Neut_2184	PWY-6749	CMP-legionaminate biosynthesis I
Neut_2187	PWY-40	putrescine biosynthesis I
Neut_2187	PWY-6305	putrescine biosynthesis IV
Neut_2188	PWY-40	putrescine biosynthesis I
Neut_2188	PWY-43	putrescine biosynthesis II
Neut_2188	PWY-6305	putrescine biosynthesis IV
Neut_2188	PWY-6834	spermidine biosynthesis III
Neut_2238	PWY-5101	L-isoleucine biosynthesis II
Neut_2238	PWY-5103	L-isoleucine biosynthesis III
Neut_2238	PWY-5104	L-isoleucine biosynthesis IV
Neut_2238	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Neut_2250	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
Neut_2250	PWY-6596	adenosine nucleotides degradation I
Neut_2250	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
Neut_2251	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
Neut_2277	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Neut_2277	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
Neut_2277	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
Neut_2278	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Neut_2278	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
Neut_2288	PWY-7158	L-phenylalanine degradation V
Neut_2291	PWY-5941	glycogen degradation II (eukaryotic)
Neut_2291	PWY-622	starch biosynthesis
Neut_2291	PWY-6731	starch degradation III
Neut_2291	PWY-6737	starch degradation V
Neut_2291	PWY-7238	sucrose biosynthesis II
Neut_2293	PWY-6654	phosphopantothenate biosynthesis III
Neut_2295	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
Neut_2295	PWY-6148	tetrahydromethanopterin biosynthesis
Neut_2295	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
Neut_2295	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
Neut_2299	PWY-5316	nicotine biosynthesis
Neut_2299	PWY-7342	superpathway of nicotine biosynthesis
Neut_2324	PWY-5381	pyridine nucleotide cycling (plants)
Neut_2324	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
Neut_2324	PWY-6596	adenosine nucleotides degradation I
Neut_2324	PWY-6606	guanosine nucleotides degradation II
Neut_2324	PWY-6607	guanosine nucleotides degradation I
Neut_2324	PWY-6608	guanosine nucleotides degradation III
Neut_2324	PWY-7185	UTP and CTP dephosphorylation I
Neut_2333	PWY-5674	nitrate reduction IV (dissimilatory)
Neut_2335	PWY-7082	ammonia oxidation IV (autotrophic ammonia oxidizers)
Neut_2335	PWY-7084	nitrifier denitrification
Neut_2339	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
Neut_2384	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Neut_2384	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Neut_2388	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Neut_2388	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Neut_2394	PWY-3781	aerobic respiration I (cytochrome c)
Neut_2394	PWY-4521	arsenite oxidation I (respiratory)
Neut_2394	PWY-6692	Fe(II) oxidation
Neut_2394	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Neut_2398	PWY-4381	fatty acid biosynthesis initiation I
Neut_2398	PWY-5743	3-hydroxypropanoate cycle
Neut_2398	PWY-5744	glyoxylate assimilation
Neut_2398	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Neut_2398	PWY-6679	jadomycin biosynthesis
Neut_2398	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Neut_2400	PWY-3221	dTDP-L-rhamnose biosynthesis II
Neut_2400	PWY-6808	dTDP-D-forosamine biosynthesis
Neut_2400	PWY-6942	dTDP-D-desosamine biosynthesis
Neut_2400	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
Neut_2400	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
Neut_2400	PWY-6974	dTDP-L-olivose biosynthesis
Neut_2400	PWY-6976	dTDP-L-mycarose biosynthesis
Neut_2400	PWY-7104	dTDP-L-megosamine biosynthesis
Neut_2400	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
Neut_2400	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
Neut_2400	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
Neut_2400	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
Neut_2400	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
Neut_2400	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
Neut_2400	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
Neut_2400	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
Neut_2431	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
Neut_2433	PWY-3801	sucrose degradation II (sucrose synthase)
Neut_2433	PWY-5054	sorbitol biosynthesis I
Neut_2433	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
Neut_2433	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
Neut_2433	PWY-5659	GDP-mannose biosynthesis
Neut_2433	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Neut_2433	PWY-621	sucrose degradation III (sucrose invertase)
Neut_2433	PWY-622	starch biosynthesis
Neut_2433	PWY-6531	mannitol cycle
Neut_2433	PWY-6981	chitin biosynthesis
Neut_2433	PWY-7238	sucrose biosynthesis II
Neut_2433	PWY-7347	sucrose biosynthesis III
Neut_2433	PWY-7385	1,3-propanediol biosynthesis (engineered)
Neut_2456	PWY-2723	trehalose degradation V
Neut_2456	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
Neut_2456	PWY-5661	GDP-glucose biosynthesis
Neut_2456	PWY-5940	streptomycin biosynthesis
Neut_2456	PWY-621	sucrose degradation III (sucrose invertase)
Neut_2456	PWY-622	starch biosynthesis
Neut_2456	PWY-6731	starch degradation III
Neut_2456	PWY-6737	starch degradation V
Neut_2456	PWY-6981	chitin biosynthesis
Neut_2456	PWY-7238	sucrose biosynthesis II
Neut_2456	PWY-7343	UDP-glucose biosynthesis
Neut_2465	PWY-6834	spermidine biosynthesis III
Neut_2467	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
Neut_2467	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Neut_2467	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
Neut_2467	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
Neut_2467	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Neut_2467	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Neut_2467	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
Neut_2467	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
Neut_2468	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
Neut_2468	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Neut_2468	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
Neut_2468	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
Neut_2468	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Neut_2468	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Neut_2468	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
Neut_2468	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
Neut_2470	PWY-5169	cyanurate degradation
Neut_2470	PWY-5703	urea degradation I
Neut_2479	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Neut_2482	PWY-1042	glycolysis IV (plant cytosol)
Neut_2482	PWY-1622	formaldehyde assimilation I (serine pathway)
Neut_2482	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
Neut_2482	PWY-5484	glycolysis II (from fructose 6-phosphate)
Neut_2482	PWY-5723	Rubisco shunt
Neut_2482	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Neut_2482	PWY-6886	1-butanol autotrophic biosynthesis
Neut_2482	PWY-6901	superpathway of glucose and xylose degradation
Neut_2482	PWY-7003	glycerol degradation to butanol
Neut_2482	PWY-7124	ethylene biosynthesis V (engineered)
Neut_2482	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
Neut_2483	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
Neut_2483	PWY-7177	UTP and CTP dephosphorylation II
Neut_2483	PWY-7185	UTP and CTP dephosphorylation I
Neut_2486	PWY-3781	aerobic respiration I (cytochrome c)
Neut_2486	PWY-4302	aerobic respiration III (alternative oxidase pathway)
Neut_2486	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
Neut_2486	PWY-5690	TCA cycle II (plants and fungi)
Neut_2486	PWY-6728	methylaspartate cycle
Neut_2486	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Neut_2486	PWY-7254	TCA cycle VII (acetate-producers)
Neut_2486	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Neut_2506	PWY-181	photorespiration
Neut_2507	PWY-5855	ubiquinol-7 biosynthesis (prokaryotic)
Neut_2507	PWY-5856	ubiquinol-9 biosynthesis (prokaryotic)
Neut_2507	PWY-5857	ubiquinol-10 biosynthesis (prokaryotic)
Neut_2507	PWY-5870	ubiquinol-8 biosynthesis (eukaryotic)
Neut_2507	PWY-5871	ubiquinol-9 biosynthesis (eukaryotic)
Neut_2507	PWY-5872	ubiquinol-10 biosynthesis (eukaryotic)
Neut_2507	PWY-5873	ubiquinol-7 biosynthesis (eukaryotic)
Neut_2507	PWY-6708	ubiquinol-8 biosynthesis (prokaryotic)
Neut_2507	PWY-7230	ubiquinol-6 biosynthesis from 4-aminobenzoate (eukaryotic)
Neut_2507	PWY-7233	ubiquinol-6 bypass biosynthesis (eukaryotic)
Neut_2515	PWY-6167	flavin biosynthesis II (archaea)
Neut_2515	PWY-6168	flavin biosynthesis III (fungi)
Neut_2515	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Neut_2516	PWY-6167	flavin biosynthesis II (archaea)
Neut_2516	PWY-6168	flavin biosynthesis III (fungi)
Neut_2516	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
Neut_2517	PWY-6167	flavin biosynthesis II (archaea)
Neut_2517	PWY-6168	flavin biosynthesis III (fungi)
Neut_2519	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
Neut_2519	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
Neut_2519	PWY-6896	thiamin salvage I
Neut_2519	PWY-6897	thiamin salvage II
