all0005	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
all0032	PWY-5791	1,4-dihydroxy-2-naphthoate biosynthesis II (plants)
all0032	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
all0032	PWY-5901	2,3-dihydroxybenzoate biosynthesis
all0032	PWY-5958	acridone alkaloid biosynthesis
all0032	PWY-6406	salicylate biosynthesis I
all0032	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
all0032	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
all0036	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
all0036	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
all0066	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
all0067	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
all0067	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
all0067	PWY-6268	adenosylcobalamin salvage from cobalamin
all0067	PWY-6269	adenosylcobalamin salvage from cobinamide II
all0070	PWY-6854	ethylene biosynthesis III (microbes)
all0152	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
all0152	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
all0155	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
all0155	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
all0155	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
all0155	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
all0167	PWY-2661	trehalose biosynthesis V
all0168	PWY-2661	trehalose biosynthesis V
all0174	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
all0174	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
all0220	PWY-2681	<i>trans</i>-zeatin biosynthesis
all0269	PWY-5958	acridone alkaloid biosynthesis
all0269	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
all0269	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
all0270	PWY-7039	phosphatidate metabolism, as a signaling molecule
all0278	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
all0278	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
all0287	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
all0287	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
all0324	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
all0324	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
all0328	PWY-5958	acridone alkaloid biosynthesis
all0328	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
all0328	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
all0374	PWY-6519	8-amino-7-oxononanoate biosynthesis I
all0374	PWY-6578	8-amino-7-oxononanoate biosynthesis III
all0374	PWY-7147	8-amino-7-oxononanoate biosynthesis II
all0376	PWY-7238	sucrose biosynthesis II
all0376	PWY-7347	sucrose biosynthesis III
all0396	PWY-6409	pyoverdine I biosynthesis
all0396	PWY-6562	norspermidine biosynthesis
all0396	PWY-761	rhizobactin 1021 biosynthesis
all0408	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
all0408	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
all0408	PWY-6164	3-dehydroquinate biosynthesis I
all0414	PWY-5958	acridone alkaloid biosynthesis
all0414	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
all0414	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
all0418	PWY-7303	3-dimethylallyl-4-hydroxybenzoate biosynthesis
all0453	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
all0456	PWY-6683	sulfate reduction III (assimilatory)
all0538	PWY-5839	menaquinol-7 biosynthesis
all0538	PWY-5844	menaquinol-9 biosynthesis
all0538	PWY-5849	menaquinol-6 biosynthesis
all0538	PWY-5890	menaquinol-10 biosynthesis
all0538	PWY-5891	menaquinol-11 biosynthesis
all0538	PWY-5892	menaquinol-12 biosynthesis
all0538	PWY-5895	menaquinol-13 biosynthesis
all0571	PWY-7052	cyanophycin metabolism
all0574	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
all0574	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
all0574	PWY-6164	3-dehydroquinate biosynthesis I
all0580	PWY-5386	methylglyoxal degradation I
all0624	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
all0624	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
all0635	PWY-5484	glycolysis II (from fructose 6-phosphate)
all0650	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
all0650	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
all0713	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
all0713	PWY-622	starch biosynthesis
all0727	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
all0727	PWY-6855	chitin degradation I (archaea)
all0727	PWY-6906	chitin derivatives degradation
all0736	PWY-5451	acetone degradation I (to methylglyoxal)
all0736	PWY-6588	pyruvate fermentation to acetone
all0736	PWY-6876	isopropanol biosynthesis
all0736	PWY-7466	acetone degradation III (to propane-1,2-diol)
all0747	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
all0747	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
all0747	PWY-6164	3-dehydroquinate biosynthesis I
all0769	PWY-5392	reductive TCA cycle II
all0769	PWY-5537	pyruvate fermentation to acetate V
all0769	PWY-5538	pyruvate fermentation to acetate VI
all0769	PWY-5690	TCA cycle II (plants and fungi)
all0769	PWY-5913	TCA cycle VI (obligate autotrophs)
all0769	PWY-6728	methylaspartate cycle
all0769	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
all0769	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
all0775	PWY-6098	diploterol and cycloartenol biosynthesis
all0775	PWY-7072	hopanoid biosynthesis (bacteria)
all0783	PWY-2201	folate transformations I
all0783	PWY-3841	folate transformations II
all0788	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
all0788	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
all0797	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
all0865	PWY-5532	adenosine nucleotides degradation IV
all0865	PWY-5723	Rubisco shunt
all0879	PWY-3162	L-tryptophan degradation V (side chain pathway)
all0879	PWY-5057	L-valine degradation II
all0879	PWY-5076	L-leucine degradation III
all0879	PWY-5078	L-isoleucine degradation II
all0879	PWY-5079	L-phenylalanine degradation III
all0879	PWY-5082	L-methionine degradation III
all0879	PWY-5480	pyruvate fermentation to ethanol I
all0879	PWY-5486	pyruvate fermentation to ethanol II
all0879	PWY-5751	phenylethanol biosynthesis
all0879	PWY-6028	acetoin degradation
all0879	PWY-6313	serotonin degradation
all0879	PWY-6333	acetaldehyde biosynthesis I
all0879	PWY-6342	noradrenaline and adrenaline degradation
all0879	PWY-6587	pyruvate fermentation to ethanol III
all0879	PWY-6802	salidroside biosynthesis
all0879	PWY-6871	3-methylbutanol biosynthesis
all0879	PWY-7013	L-1,2-propanediol degradation
all0879	PWY-7111	pyruvate fermentation to isobutanol (engineered)
all0879	PWY-7118	chitin degradation to ethanol
all0879	PWY-7396	butanol and isobutanol biosynthesis (engineered)
all0879	PWY-7557	dehydrodiconiferyl alcohol degradation
all0888	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
all0888	PWY-5723	Rubisco shunt
all0945	PWY-3781	aerobic respiration I (cytochrome c)
all0945	PWY-4302	aerobic respiration III (alternative oxidase pathway)
all0945	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
all0945	PWY-5690	TCA cycle II (plants and fungi)
all0945	PWY-6728	methylaspartate cycle
all0945	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
all0945	PWY-7254	TCA cycle VII (acetate-producers)
all0945	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
all0961	PWY-5964	guanylyl molybdenum cofactor biosynthesis
all0980	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
all0980	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
all0982	PWY-6890	4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis
all0985	PWY-7560	methylerythritol phosphate pathway II
all0988	PWY-6906	chitin derivatives degradation
all0988	PWY-7077	<i>N</i>-acetyl-D-galactosamine degradation
all0988	PWY-7395	D-galactosamine and <i>N</i>-acetyl-D-galactosamine degradation
all1053	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
all1058	PWY-2721	trehalose degradation III
all1058	PWY-2722	trehalose degradation IV
all1058	PWY-6317	galactose degradation I (Leloir pathway)
all1058	PWY-7459	kojibiose degradation
all1059	PWY-3801	sucrose degradation II (sucrose synthase)
all1141	PWY-7303	3-dimethylallyl-4-hydroxybenzoate biosynthesis
all1162	PWY-6700	queuosine biosynthesis
all1235	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
all1248	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
all1248	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
all1267	PWY-5747	2-methylcitrate cycle II
all1272	PWY-5941	glycogen degradation II (eukaryotic)
all1272	PWY-622	starch biosynthesis
all1272	PWY-6731	starch degradation III
all1272	PWY-6737	starch degradation V
all1272	PWY-7238	sucrose biosynthesis II
all1319	PWY-6654	phosphopantothenate biosynthesis III
all1357	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
all1357	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
all1457	PWY-6823	molybdenum cofactor biosynthesis
all1457	PWY-6891	thiazole biosynthesis II (Bacillus)
all1457	PWY-6892	thiazole biosynthesis I (E. coli)
all1457	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
all1512	PWY-101	photosynthesis light reactions
all1512	PWY-6785	hydrogen production VIII
all1517	PWY-6823	molybdenum cofactor biosynthesis
all1522	PWY-6654	phosphopantothenate biosynthesis III
all1638	PWY-6823	molybdenum cofactor biosynthesis
all1642	PWY-4381	fatty acid biosynthesis initiation I
all1642	PWY-6799	fatty acid biosynthesis (plant mitochondria)
all1642	PWY-723	alkylnitronates degradation
all1642	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
all1643	PWY-5971	palmitate biosynthesis II (bacteria and plants)
all1643	PWY-5973	<i>cis</i>-vaccenate biosynthesis
all1643	PWY-5989	stearate biosynthesis II (bacteria and plants)
all1643	PWY-5994	palmitate biosynthesis I (animals and fungi)
all1643	PWY-6113	superpathway of mycolate biosynthesis
all1643	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
all1643	PWY-6519	8-amino-7-oxononanoate biosynthesis I
all1643	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
all1643	PWYG-321	mycolate biosynthesis
all1681	PWY-5686	UMP biosynthesis
all1686	PWY-6348	phosphate acquisition
all1686	PWY-6357	phosphate utilization in cell wall regeneration
all1686	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
all1686	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
all1693	PWY-5667	CDP-diacylglycerol biosynthesis I
all1693	PWY-5981	CDP-diacylglycerol biosynthesis III
all1694	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
all1694	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
all1694	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
all1811	PWY-4261	glycerol degradation I
all1876	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
all1876	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
all1876	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
all1895	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
all1895	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
all1895	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
all1897	PWY-5874	heme degradation
all1897	PWY-5915	phycoerythrobilin biosynthesis I
all1897	PWY-5917	phycocyanobilin biosynthesis
all1897	PWY-7170	phytochromobilin biosynthesis
all1908	PWY-6898	thiamin salvage III
all1908	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
all1908	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
all2026	PWY-5025	indole-3-acetate biosynthesis IV (bacteria)
all2026	PWY-581	indole-3-acetate biosynthesis II
all2026	PWY-7308	acrylonitrile degradation I
all2027	PWY-5025	indole-3-acetate biosynthesis IV (bacteria)
all2027	PWY-581	indole-3-acetate biosynthesis II
all2027	PWY-7308	acrylonitrile degradation I
all2063	PWY-7183	pyrimidine nucleobases salvage I
all2091	PWY-5316	nicotine biosynthesis
all2091	PWY-5381	pyridine nucleotide cycling (plants)
all2091	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
all2091	PWY-7342	superpathway of nicotine biosynthesis
all2216	PWY-7399	methylphosphonate degradation II
all2217	PWY-7399	methylphosphonate degradation II
all2219	PWY-7399	methylphosphonate degradation II
all2225	PWY-7399	methylphosphonate degradation II
all2286	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
all2286	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
all2286	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
all2286	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
all2303	PWY-5686	UMP biosynthesis
all2315	PWY-5101	L-isoleucine biosynthesis II
all2315	PWY-5103	L-isoleucine biosynthesis III
all2315	PWY-5104	L-isoleucine biosynthesis IV
all2315	PWY-7111	pyruvate fermentation to isobutanol (engineered)
all2347	PWY-5791	1,4-dihydroxy-2-naphthoate biosynthesis II (plants)
all2347	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
all2364	PWY-4381	fatty acid biosynthesis initiation I
all2364	PWY-5743	3-hydroxypropanoate cycle
all2364	PWY-5744	glyoxylate assimilation
all2364	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
all2364	PWY-6679	jadomycin biosynthesis
all2364	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
all2391	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
all2391	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
all2391	PWY-6268	adenosylcobalamin salvage from cobalamin
all2391	PWY-6269	adenosylcobalamin salvage from cobinamide II
all2425	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
all2453	PWY-101	photosynthesis light reactions
all2453	PWY-6785	hydrogen production VIII
all2497	PWY-7335	UDP-<i>N</i>-acetyl-&alpha;-D-mannosaminouronate biosynthesis
all2498	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
all2498	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
all2501	PWY-7560	methylerythritol phosphate pathway II
all2506	PWY-7052	cyanophycin metabolism
all2521	PWY-6936	seleno-amino acid biosynthesis
all2561	PWY-5482	pyruvate fermentation to acetate II
all2561	PWY-5485	pyruvate fermentation to acetate IV
all2561	PWY-5497	purine nucleobases degradation II (anaerobic)
all2563	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
all2563	PWY-5723	Rubisco shunt
all2564	PWY-1042	glycolysis IV (plant cytosol)
all2564	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
all2564	PWY-5484	glycolysis II (from fructose 6-phosphate)
all2564	PWY-5723	Rubisco shunt
all2564	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
all2564	PWY-6886	1-butanol autotrophic biosynthesis
all2564	PWY-6901	superpathway of glucose and xylose degradation
all2564	PWY-7003	glycerol degradation to butanol
all2564	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
all2564	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
all2566	PWY-1042	glycolysis IV (plant cytosol)
all2566	PWY-5484	glycolysis II (from fructose 6-phosphate)
all2566	PWY-6901	superpathway of glucose and xylose degradation
all2566	PWY-7003	glycerol degradation to butanol
all2724	PWY-4361	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation
all2724	PWY-5389	3-methylthiopropanoate biosynthesis
all2799	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
all2799	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
all2806	PWY-5941	glycogen degradation II (eukaryotic)
all2806	PWY-622	starch biosynthesis
all2806	PWY-6731	starch degradation III
all2806	PWY-6737	starch degradation V
all2806	PWY-7238	sucrose biosynthesis II
all2808	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
all2810	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
all2810	PWY-3162	L-tryptophan degradation V (side chain pathway)
all2810	PWY-5057	L-valine degradation II
all2810	PWY-5076	L-leucine degradation III
all2810	PWY-5078	L-isoleucine degradation II
all2810	PWY-5079	L-phenylalanine degradation III
all2810	PWY-5082	L-methionine degradation III
all2810	PWY-5480	pyruvate fermentation to ethanol I
all2810	PWY-5486	pyruvate fermentation to ethanol II
all2810	PWY-5751	phenylethanol biosynthesis
all2810	PWY-6028	acetoin degradation
all2810	PWY-6313	serotonin degradation
all2810	PWY-6333	acetaldehyde biosynthesis I
all2810	PWY-6342	noradrenaline and adrenaline degradation
all2810	PWY-6587	pyruvate fermentation to ethanol III
all2810	PWY-6802	salidroside biosynthesis
all2810	PWY-6871	3-methylbutanol biosynthesis
all2810	PWY-7013	L-1,2-propanediol degradation
all2810	PWY-7111	pyruvate fermentation to isobutanol (engineered)
all2810	PWY-7118	chitin degradation to ethanol
all2810	PWY-7396	butanol and isobutanol biosynthesis (engineered)
all2810	PWY-7557	dehydrodiconiferyl alcohol degradation
all2843	PWY-5491	diethylphosphate degradation
all2846	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
all2847	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
all2853	PWY-3821	galactose degradation III
all2853	PWY-6317	galactose degradation I (Leloir pathway)
all2853	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
all2853	PWY-6527	stachyose degradation
all2853	PWY-7328	superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
all2853	PWY-7344	UDP-D-galactose biosynthesis
all2910	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
all2910	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
all2910	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
all2910	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
all2917	PWY-2301	<i>myo</i>-inositol biosynthesis
all2917	PWY-4702	phytate degradation I
all2917	PWY-6363	D-<i>myo</i>-inositol (1,4,5)-trisphosphate degradation
all2929	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
all2929	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
all2929	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
all2929	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
all2931	PWY-5386	methylglyoxal degradation I
all2970	PWY-3781	aerobic respiration I (cytochrome c)
all2970	PWY-4302	aerobic respiration III (alternative oxidase pathway)
all2970	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
all2970	PWY-5690	TCA cycle II (plants and fungi)
all2970	PWY-6728	methylaspartate cycle
all2970	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
all2970	PWY-7254	TCA cycle VII (acetate-producers)
all2970	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
all2997	PWY-2941	L-lysine biosynthesis II
all2997	PWY-2942	L-lysine biosynthesis III
all2997	PWY-5097	L-lysine biosynthesis VI
all3023	PWY-5694	allantoin degradation to glyoxylate I
all3023	PWY-5705	allantoin degradation to glyoxylate III
all3093	PWY-6123	inosine-5'-phosphate biosynthesis I
all3093	PWY-6124	inosine-5'-phosphate biosynthesis II
all3093	PWY-7234	inosine-5'-phosphate biosynthesis III
all3174	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
all3174	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
all3174	PWY-6269	adenosylcobalamin salvage from cobinamide II
all3205	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
all3244	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
all3244	PWY-5912	2'-deoxymugineic acid phytosiderophore biosynthesis
all3401	PWY-40	putrescine biosynthesis I
all3401	PWY-43	putrescine biosynthesis II
all3401	PWY-6305	putrescine biosynthesis IV
all3401	PWY-6834	spermidine biosynthesis III
all3509	PWY-3821	galactose degradation III
all3509	PWY-6317	galactose degradation I (Leloir pathway)
all3509	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
all3509	PWY-6527	stachyose degradation
all3509	PWY-7328	superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
all3509	PWY-7344	UDP-D-galactose biosynthesis
all3519	PWY-6891	thiazole biosynthesis II (Bacillus)
all3519	PWY-6892	thiazole biosynthesis I (E. coli)
all3536	PWY-6167	flavin biosynthesis II (archaea)
all3536	PWY-6168	flavin biosynthesis III (fungi)
all3536	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
all3538	PWY-1042	glycolysis IV (plant cytosol)
all3538	PWY-1622	formaldehyde assimilation I (serine pathway)
all3538	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
all3538	PWY-5484	glycolysis II (from fructose 6-phosphate)
all3538	PWY-5723	Rubisco shunt
all3538	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
all3538	PWY-6886	1-butanol autotrophic biosynthesis
all3538	PWY-6901	superpathway of glucose and xylose degradation
all3538	PWY-7003	glycerol degradation to butanol
all3538	PWY-7124	ethylene biosynthesis V (engineered)
all3538	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
all3540	PWY-6910	hydroxymethylpyrimidine salvage
all3540	PWY-7356	thiamin salvage IV (yeast)
all3540	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
all3566	PWY-4361	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation
all3566	PWY-7174	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation II
all3569	PWY-5155	&beta;-alanine biosynthesis III
all3572	PWY-101	photosynthesis light reactions
all3572	PWY-6785	hydrogen production VIII
all3651	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
all3651	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
all3651	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
all3651	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
all3652	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
all3652	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
all3652	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
all3679	PWY-2941	L-lysine biosynthesis II
all3679	PWY-2942	L-lysine biosynthesis III
all3679	PWY-5097	L-lysine biosynthesis VI
all3680	PWY-2941	L-lysine biosynthesis II
all3680	PWY-2942	L-lysine biosynthesis III
all3680	PWY-5097	L-lysine biosynthesis VI
all3680	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
all3680	PWY-6559	spermidine biosynthesis II
all3680	PWY-6562	norspermidine biosynthesis
all3680	PWY-7153	grixazone biosynthesis
all3680	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
all3722	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
all3741	PWY-723	alkylnitronates degradation
all3802	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
all3802	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
all3802	PWY-6268	adenosylcobalamin salvage from cobalamin
all3802	PWY-6269	adenosylcobalamin salvage from cobinamide II
all3865	PWY-6823	molybdenum cofactor biosynthesis
all3876	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
all3879	PWY-7052	cyanophycin metabolism
all3880	PWY-7052	cyanophycin metabolism
all3909	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
all3909	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
all3913	PWY-5392	reductive TCA cycle II
all3913	PWY-5537	pyruvate fermentation to acetate V
all3913	PWY-5538	pyruvate fermentation to acetate VI
all3913	PWY-5690	TCA cycle II (plants and fungi)
all3913	PWY-5913	TCA cycle VI (obligate autotrophs)
all3913	PWY-6728	methylaspartate cycle
all3913	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
all3913	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
all3914	PWY-5392	reductive TCA cycle II
all3914	PWY-5537	pyruvate fermentation to acetate V
all3914	PWY-5538	pyruvate fermentation to acetate VI
all3914	PWY-5690	TCA cycle II (plants and fungi)
all3914	PWY-5913	TCA cycle VI (obligate autotrophs)
all3914	PWY-6728	methylaspartate cycle
all3914	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
all3914	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
all3942	PWY-6523	nitrite-dependent anaerobic methane oxidation
all3942	PWY-6748	nitrate reduction VII (denitrification)
all3942	PWY-7084	nitrifier denitrification
all3964	PWY-6749	CMP-legionaminate biosynthesis I
all3976	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
all3991	PWY-5350	thiosulfate disproportionation III (rhodanese)
all4008	PWY-1042	glycolysis IV (plant cytosol)
all4008	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
all4008	PWY-5484	glycolysis II (from fructose 6-phosphate)
all4008	PWY-5723	Rubisco shunt
all4008	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
all4008	PWY-6886	1-butanol autotrophic biosynthesis
all4008	PWY-6901	superpathway of glucose and xylose degradation
all4008	PWY-7003	glycerol degradation to butanol
all4008	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
all4008	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
all4012	PWY-3461	L-tyrosine biosynthesis II
all4012	PWY-3462	L-phenylalanine biosynthesis II
all4012	PWY-6120	L-tyrosine biosynthesis III
all4012	PWY-6627	salinosporamide A biosynthesis
all4019	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
all4020	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
all4020	PWY-5723	Rubisco shunt
all4021	PWY-5484	glycolysis II (from fructose 6-phosphate)
all4035	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
all4035	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
all4035	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
all4037	PWY-6936	seleno-amino acid biosynthesis
all4037	PWY-7274	D-cycloserine biosynthesis
all4052	PWY-6891	thiazole biosynthesis II (Bacillus)
all4052	PWY-6892	thiazole biosynthesis I (E. coli)
all4052	PWY-7560	methylerythritol phosphate pathway II
all4063	PWY-5269	cardiolipin biosynthesis II
all4063	PWY-5668	cardiolipin biosynthesis I
all4116	PWY-6454	vancomycin resistance I
all4116	PWY-6455	vancomycin resistance II
all4121	PWY-101	photosynthesis light reactions
all4121	PWY-7230	ubiquinol-6 biosynthesis from 4-aminobenzoate (eukaryotic)
all4131	PWY-1042	glycolysis IV (plant cytosol)
all4131	PWY-5484	glycolysis II (from fructose 6-phosphate)
all4131	PWY-6886	1-butanol autotrophic biosynthesis
all4131	PWY-6901	superpathway of glucose and xylose degradation
all4131	PWY-7003	glycerol degradation to butanol
all4182	PWY-1042	glycolysis IV (plant cytosol)
all4182	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
all4182	PWY-5484	glycolysis II (from fructose 6-phosphate)
all4182	PWY-5723	Rubisco shunt
all4182	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
all4182	PWY-6886	1-butanol autotrophic biosynthesis
all4182	PWY-6901	superpathway of glucose and xylose degradation
all4182	PWY-7003	glycerol degradation to butanol
all4182	PWY-7124	ethylene biosynthesis V (engineered)
all4182	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
all4196	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
all4257	PWY-6672	<i>cis</i>-genanyl-CoA degradation
all4257	PWY-7118	chitin degradation to ethanol
all4272	PWY-5686	UMP biosynthesis
all4283	PWY-6167	flavin biosynthesis II (archaea)
all4316	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
all4316	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
all4316	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
all4327	PWY-5097	L-lysine biosynthesis VI
all4342	PWY-5659	GDP-mannose biosynthesis
all4342	PWY-6073	alginate biosynthesis I (algal)
all4342	PWY-6082	alginate biosynthesis II (bacterial)
all4342	PWY-882	L-ascorbate biosynthesis I (L-galactose pathway)
all4365	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
all4365	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
all4391	PWY-5971	palmitate biosynthesis II (bacteria and plants)
all4391	PWY-5973	<i>cis</i>-vaccenate biosynthesis
all4391	PWY-5989	stearate biosynthesis II (bacteria and plants)
all4391	PWY-6113	superpathway of mycolate biosynthesis
all4391	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
all4391	PWY-6519	8-amino-7-oxononanoate biosynthesis I
all4391	PWY-7096	triclosan resistance
all4391	PWYG-321	mycolate biosynthesis
all4443	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
all4443	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
all4480	PWY-5068	chlorophyll cycle
all4480	PWY-5086	chlorophyll <i>a</i> biosynthesis I
all4511	PWY-101	photosynthesis light reactions
all4511	PWY-6785	hydrogen production VIII
all4538	PWY-5659	GDP-mannose biosynthesis
all4538	PWY-6073	alginate biosynthesis I (algal)
all4538	PWY-6082	alginate biosynthesis II (bacterial)
all4538	PWY-882	L-ascorbate biosynthesis I (L-galactose pathway)
all4563	PWY-1042	glycolysis IV (plant cytosol)
all4563	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
all4563	PWY-5484	glycolysis II (from fructose 6-phosphate)
all4563	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
all4563	PWY-7385	1,3-propanediol biosynthesis (engineered)
all4591	PWY-5123	<i>trans, trans</i>-farnesyl diphosphate biosynthesis
all4591	PWY-6174	mevalonate pathway II (archaea)
all4591	PWY-6383	mono-<i>trans</i>, poly-<i>cis</i> decaprenyl phosphate biosynthesis
all4591	PWY-6859	<i>all-trans</i>-farnesol biosynthesis
all4591	PWY-7102	bisabolene biosynthesis
all4591	PWY-7391	isoprene biosynthesis II (engineered)
all4591	PWY-7524	mevalonate pathway III (archaea)
all4591	PWY-7560	methylerythritol phosphate pathway II
all4591	PWY-922	mevalonate pathway I
all4613	PWY-5101	L-isoleucine biosynthesis II
all4613	PWY-5103	L-isoleucine biosynthesis III
all4613	PWY-5104	L-isoleucine biosynthesis IV
all4613	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
all4613	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
all4613	PWY-6389	(<i>S</i>)-acetoin biosynthesis
all4613	PWY-7111	pyruvate fermentation to isobutanol (engineered)
all4639	PWY-5941	glycogen degradation II (eukaryotic)
all4639	PWY-6724	starch degradation II
all4639	PWY-6737	starch degradation V
all4639	PWY-7238	sucrose biosynthesis II
all4645	PWY-622	starch biosynthesis
all4665	PWY-1281	sulfoacetaldehyde degradation I
all4665	PWY-5482	pyruvate fermentation to acetate II
all4665	PWY-5485	pyruvate fermentation to acetate IV
all4665	PWY-5497	purine nucleobases degradation II (anaerobic)
all4665	PWY-6637	sulfolactate degradation II
all4667	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
all4673	PWY-5316	nicotine biosynthesis
all4673	PWY-7342	superpathway of nicotine biosynthesis
all4698	PWY-5194	siroheme biosynthesis
all4698	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
all4704	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
all4704	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
all4708	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
all4708	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
all4708	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
all4708	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
all4708	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
all4708	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
all4713	PWY-3821	galactose degradation III
all4713	PWY-6317	galactose degradation I (Leloir pathway)
all4713	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
all4713	PWY-6527	stachyose degradation
all4713	PWY-7328	superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
all4713	PWY-7344	UDP-D-galactose biosynthesis
all4721	PWY-5663	tetrahydrobiopterin biosynthesis I
all4721	PWY-5664	tetrahydrobiopterin biosynthesis II
all4721	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
all4721	PWY-6703	preQ<sub>0</sub> biosynthesis
all4721	PWY-6983	tetrahydrobiopterin biosynthesis III
all4721	PWY-7442	drosopterin and aurodrosopterin biosynthesis
all4725	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
all4725	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
all4736	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
all4736	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
all4751	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
all4751	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
all4751	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
all4771	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
all4771	PWY-6507	4-deoxy-L-<i>threo</i>-hex-4-enopyranuronate degradation
all4771	PWY-7242	D-fructuronate degradation
all4771	PWY-7310	D-glucosaminate degradation
all4826	PWY-66	GDP-L-fucose biosynthesis I (from GDP-D-mannose)
all4828	PWY-5738	GDP-6-deoxy-D-talose biosynthesis
all4828	PWY-5739	GDP-D-perosamine biosynthesis
all4828	PWY-5740	GDP-L-colitose biosynthesis
all4828	PWY-66	GDP-L-fucose biosynthesis I (from GDP-D-mannose)
all4861	PWY-1622	formaldehyde assimilation I (serine pathway)
all4861	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
all4861	PWY-5913	TCA cycle VI (obligate autotrophs)
all4861	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
all4861	PWY-6146	<i>Methanobacterium thermoautotrophicum</i> biosynthetic metabolism
all4861	PWY-6549	L-glutamine biosynthesis III
all4861	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
all4861	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
all4861	PWY-7124	ethylene biosynthesis V (engineered)
all4968	PWY-4081	glutathione redox reactions I
all4985	PWY-3801	sucrose degradation II (sucrose synthase)
all5019	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
all5024	PWY-5098	chlorophyll <i>a</i> degradation I
all5024	PWY-6927	chlorophyll <i>a</i> degradation II
all5039	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
all5062	PWY-1042	glycolysis IV (plant cytosol)
all5062	PWY-5484	glycolysis II (from fructose 6-phosphate)
all5062	PWY-6901	superpathway of glucose and xylose degradation
all5062	PWY-7003	glycerol degradation to butanol
all5063	PWY-5381	pyridine nucleotide cycling (plants)
all5063	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
all5076	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
all5076	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
all5078	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
all5078	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
all5088	PWY-7206	pyrimidine deoxyribonucleotides dephosphorylation
all5089	PWY-6749	CMP-legionaminate biosynthesis I
all5136	PWY-6823	molybdenum cofactor biosynthesis
all5138	PWY-5278	sulfite oxidation III
all5138	PWY-5340	sulfate activation for sulfonation
all5138	PWY-6683	sulfate reduction III (assimilatory)
all5138	PWY-6932	selenate reduction
all5167	PWY-7560	methylerythritol phosphate pathway II
all5258	PWY-6167	flavin biosynthesis II (archaea)
all5258	PWY-6168	flavin biosynthesis III (fungi)
all5258	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
all5342	PWY-5129	sphingolipid biosynthesis (plants)
all5359	PWY-6012	acyl carrier protein metabolism I
all5359	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
alr0031	PWY-622	starch biosynthesis
alr0034	PWY-5791	1,4-dihydroxy-2-naphthoate biosynthesis II (plants)
alr0034	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
alr0038	PWY-3221	dTDP-L-rhamnose biosynthesis II
alr0038	PWY-6808	dTDP-D-forosamine biosynthesis
alr0038	PWY-6942	dTDP-D-desosamine biosynthesis
alr0038	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
alr0038	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
alr0038	PWY-6974	dTDP-L-olivose biosynthesis
alr0038	PWY-6976	dTDP-L-mycarose biosynthesis
alr0038	PWY-7104	dTDP-L-megosamine biosynthesis
alr0038	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
alr0038	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
alr0038	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
alr0038	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
alr0038	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
alr0038	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
alr0038	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
alr0038	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
alr0054	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
alr0054	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
alr0068	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
alr0094	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
alr0094	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
alr0106	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
alr0169	PWY-842	starch degradation I
alr0212	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
alr0212	PWY-2201	folate transformations I
alr0212	PWY-3841	folate transformations II
alr0212	PWY-5030	L-histidine degradation III
alr0212	PWY-5497	purine nucleobases degradation II (anaerobic)
alr0212	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
alr0227	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
alr0227	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
alr0227	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
alr0237	PWY-5988	wound-induced proteolysis I
alr0237	PWY-6018	seed germination protein turnover
alr0239	PWY-4381	fatty acid biosynthesis initiation I
alr0240	PWY-4381	fatty acid biosynthesis initiation I
alr0240	PWY-6799	fatty acid biosynthesis (plant mitochondria)
alr0240	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
alr0241	PWY-5667	CDP-diacylglycerol biosynthesis I
alr0241	PWY-5981	CDP-diacylglycerol biosynthesis III
alr0241	PWY-7411	superpathway of phosphatidate biosynthesis (yeast)
alr0241	PWY-7417	phospholipid remodeling (phosphatidate, yeast)
alr0297	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
alr0297	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
alr0297	PWY-6269	adenosylcobalamin salvage from cobinamide II
alr0308	PWY-2201	folate transformations I
alr0308	PWY-3841	folate transformations II
alr0312	PWY-5791	1,4-dihydroxy-2-naphthoate biosynthesis II (plants)
alr0312	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
alr0331	PWY-5941	glycogen degradation II (eukaryotic)
alr0331	PWY-6724	starch degradation II
alr0331	PWY-6737	starch degradation V
alr0331	PWY-7238	sucrose biosynthesis II
alr0346	PWY-702	L-methionine biosynthesis II
alr0379	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
alr0379	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
alr0379	PWY-6269	adenosylcobalamin salvage from cobinamide II
alr0477	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
alr0477	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
alr0477	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
alr0477	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
alr0486	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
alr0488	PWY-3341	L-proline biosynthesis III
alr0488	PWY-4981	L-proline biosynthesis II (from arginine)
alr0488	PWY-6344	L-ornithine degradation II (Stickland reaction)
alr0515	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
alr0519	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
alr0520	PWY-5194	siroheme biosynthesis
alr0520	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
alr0540	PWY-5737	(5<i>R</i>)-carbapenem carboxylate biosynthesis
alr0540	PWY-6853	ethylene biosynthesis II (microbes)
alr0540	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
alr0599	PWY-6891	thiazole biosynthesis II (Bacillus)
alr0599	PWY-6892	thiazole biosynthesis I (E. coli)
alr0599	PWY-7560	methylerythritol phosphate pathway II
alr0607	PWY-6683	sulfate reduction III (assimilatory)
alr0658	PWY-7346	UDP-&alpha;-D-glucuronate biosynthesis (from UDP-glucose)
alr0762	PWY-5382	hydrogen oxidation II (aerobic, NAD)
alr0762	PWY-6758	hydrogen production II
alr0782	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
alr0782	PWY-5723	Rubisco shunt
alr0819	PWY-621	sucrose degradation III (sucrose invertase)
alr0951	PWY-3781	aerobic respiration I (cytochrome c)
alr0951	PWY-4521	arsenite oxidation I (respiratory)
alr0951	PWY-6692	Fe(II) oxidation
alr0951	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
alr0975	PWY-6745	phytochelatins biosynthesis
alr0989	PWY-6123	inosine-5'-phosphate biosynthesis I
alr0989	PWY-7234	inosine-5'-phosphate biosynthesis III
alr1004	PWY-6832	2-aminoethylphosphonate degradation II
alr1018	PWY-5169	cyanurate degradation
alr1018	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
alr1026	PWY-2161	folate polyglutamylation
alr1041	PWY-5484	glycolysis II (from fructose 6-phosphate)
alr1042	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
alr1050	PWY-3801	sucrose degradation II (sucrose synthase)
alr1050	PWY-5054	sorbitol biosynthesis I
alr1050	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
alr1050	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
alr1050	PWY-5659	GDP-mannose biosynthesis
alr1050	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
alr1050	PWY-621	sucrose degradation III (sucrose invertase)
alr1050	PWY-622	starch biosynthesis
alr1050	PWY-6531	mannitol cycle
alr1050	PWY-6981	chitin biosynthesis
alr1050	PWY-7238	sucrose biosynthesis II
alr1050	PWY-7347	sucrose biosynthesis III
alr1050	PWY-7385	1,3-propanediol biosynthesis (engineered)
alr1095	PWY-1042	glycolysis IV (plant cytosol)
alr1095	PWY-5484	glycolysis II (from fructose 6-phosphate)
alr1095	PWY-6901	superpathway of glucose and xylose degradation
alr1095	PWY-7003	glycerol degradation to butanol
alr1104	PWY-5386	methylglyoxal degradation I
alr1105	PWY-4202	arsenate detoxification I (glutaredoxin)
alr1105	PWY-4621	arsenate detoxification II (glutaredoxin)
alr1155	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
alr1155	PWY-5686	UMP biosynthesis
alr1155	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
alr1217	PWY-5316	nicotine biosynthesis
alr1217	PWY-7342	superpathway of nicotine biosynthesis
alr1244	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
alr1245	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
alr1245	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
alr1282	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
alr1282	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
alr1282	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
alr1313	PWY-7396	butanol and isobutanol biosynthesis (engineered)
alr1343	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
alr1343	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
alr1343	PWY-6897	thiamin salvage II
alr1343	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
alr1343	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
alr1343	PWY-7353	4-methyl-5(&beta;-hydroxyethyl)thiazole salvage (yeast)
alr1343	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
alr1348	PWY-6683	sulfate reduction III (assimilatory)
alr1374	PWY-6167	flavin biosynthesis II (archaea)
alr1404	PWY-6936	seleno-amino acid biosynthesis
alr1404	PWY-7274	D-cycloserine biosynthesis
alr1407	PWY-3081	L-lysine biosynthesis V
alr1407	PWY-6871	3-methylbutanol biosynthesis
alr1414	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
alr1521	PWY-621	sucrose degradation III (sucrose invertase)
alr1524	PWY-5532	adenosine nucleotides degradation IV
alr1524	PWY-5723	Rubisco shunt
alr1526	PWY-5532	adenosine nucleotides degradation IV
alr1526	PWY-5723	Rubisco shunt
alr1533	PWY-5532	adenosine nucleotides degradation IV
alr1533	PWY-5723	Rubisco shunt
alr1586	PWY-5767	alr1586|alr1586|NP_485626.1|GeneID:1105178
alr1602	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
alr1602	PWY-6855	chitin degradation I (archaea)
alr1602	PWY-6906	chitin derivatives degradation
alr1623	PWY-2201	folate transformations I
alr1623	PWY-5497	purine nucleobases degradation II (anaerobic)
alr1666	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
alr1666	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
alr1798	PWY-6700	queuosine biosynthesis
alr1827	PWY-5913	TCA cycle VI (obligate autotrophs)
alr1827	PWY-6549	L-glutamine biosynthesis III
alr1827	PWY-6728	methylaspartate cycle
alr1827	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
alr1827	PWY-7124	ethylene biosynthesis V (engineered)
alr1827	PWY-7254	TCA cycle VII (acetate-producers)
alr1827	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
alr1878	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
alr1878	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
alr1879	PWY-622	starch biosynthesis
alr1885	PWY-6700	queuosine biosynthesis
alr1894	PWY-5367	petroselinate biosynthesis
alr1894	PWY-5971	palmitate biosynthesis II (bacteria and plants)
alr1894	PWY-5973	<i>cis</i>-vaccenate biosynthesis
alr1894	PWY-5989	stearate biosynthesis II (bacteria and plants)
alr1894	PWY-5994	palmitate biosynthesis I (animals and fungi)
alr1894	PWY-6113	superpathway of mycolate biosynthesis
alr1894	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
alr1894	PWY-6519	8-amino-7-oxononanoate biosynthesis I
alr1894	PWY-6951	alr1894|fabG|NP_485934.1|GeneID:1105486
alr1894	PWY-7053	docosahexaenoate biosynthesis I (lower eukaryotes)
alr1894	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
alr1894	PWYG-321	mycolate biosynthesis
alr1900	PWY-6749	CMP-legionaminate biosynthesis I
alr1913	PWY-1042	glycolysis IV (plant cytosol)
alr1913	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
alr1913	PWY-5484	glycolysis II (from fructose 6-phosphate)
alr1913	PWY-7385	1,3-propanediol biosynthesis (engineered)
alr1921	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
alr1924	PWY-6164	3-dehydroquinate biosynthesis I
alr1961	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
alr1961	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
alr2048	PWY-2941	L-lysine biosynthesis II
alr2048	PWY-5097	L-lysine biosynthesis VI
alr2051	PWY-4041	&gamma;-glutamyl cycle
alr2051	PWY-5826	hypoglycin biosynthesis
alr2057	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
alr2064	PWY-6475	<i>trans</i>-lycopene biosynthesis II (plants)
alr2073	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
alr2074	PWY-5386	methylglyoxal degradation I
alr2083	PWY-7183	pyrimidine nucleobases salvage I
alr2190	PWY-842	starch degradation I
alr2256	PWY-5451	acetone degradation I (to methylglyoxal)
alr2256	PWY-6588	pyruvate fermentation to acetone
alr2256	PWY-6876	isopropanol biosynthesis
alr2256	PWY-7466	acetone degradation III (to propane-1,2-diol)
alr2268	PWY-6123	inosine-5'-phosphate biosynthesis I
alr2268	PWY-6124	inosine-5'-phosphate biosynthesis II
alr2268	PWY-7234	inosine-5'-phosphate biosynthesis III
alr2271	PWY-5971	palmitate biosynthesis II (bacteria and plants)
alr2271	PWY-5973	<i>cis</i>-vaccenate biosynthesis
alr2271	PWY-5989	stearate biosynthesis II (bacteria and plants)
alr2271	PWY-5994	palmitate biosynthesis I (animals and fungi)
alr2271	PWY-6113	superpathway of mycolate biosynthesis
alr2271	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
alr2271	PWY-6519	8-amino-7-oxononanoate biosynthesis I
alr2271	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
alr2271	PWYG-321	mycolate biosynthesis
alr2321	PWY-5386	methylglyoxal degradation I
alr2328	PWY-381	nitrate reduction II (assimilatory)
alr2328	PWY-5675	nitrate reduction V (assimilatory)
alr2328	PWY-6549	L-glutamine biosynthesis III
alr2328	PWY-6963	ammonia assimilation cycle I
alr2328	PWY-6964	ammonia assimilation cycle II
alr2350	PWY-5723	Rubisco shunt
alr2361	PWY-6749	CMP-legionaminate biosynthesis I
alr2450	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
alr2450	PWY-622	starch biosynthesis
alr2458	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
alr2465	PWY-5791	1,4-dihydroxy-2-naphthoate biosynthesis II (plants)
alr2465	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
alr2475	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
alr2475	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
alr2475	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
alr2482	PWY-5381	pyridine nucleotide cycling (plants)
alr2483	PWY-5381	pyridine nucleotide cycling (plants)
alr2483	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
alr2485	PWY-5381	pyridine nucleotide cycling (plants)
alr2485	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
alr2495	PWY-6823	molybdenum cofactor biosynthesis
alr2495	PWY-6891	thiazole biosynthesis II (Bacillus)
alr2495	PWY-6892	thiazole biosynthesis I (E. coli)
alr2495	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
alr2502	PWY-1081	homogalacturonan degradation
alr2502	PWY-7246	pectin degradation II
alr2502	PWY-7248	pectin degradation III
alr2505	PWY-6823	molybdenum cofactor biosynthesis
alr2505	PWY-6891	thiazole biosynthesis II (Bacillus)
alr2505	PWY-6892	thiazole biosynthesis I (E. coli)
alr2505	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
alr2515	PWY-3781	aerobic respiration I (cytochrome c)
alr2515	PWY-4521	arsenite oxidation I (respiratory)
alr2515	PWY-6692	Fe(II) oxidation
alr2515	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
alr2518	PWY-5331	taurine biosynthesis
alr2542	PWY-2941	L-lysine biosynthesis II
alr2542	PWY-2942	L-lysine biosynthesis III
alr2542	PWY-5097	L-lysine biosynthesis VI
alr2732	PWY-3781	aerobic respiration I (cytochrome c)
alr2732	PWY-4521	arsenite oxidation I (respiratory)
alr2732	PWY-6692	Fe(II) oxidation
alr2732	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
alr2764	PWY-6349	CDP-archaeol biosynthesis
alr2771	PWY-5101	L-isoleucine biosynthesis II
alr2771	PWY-5103	L-isoleucine biosynthesis III
alr2771	PWY-5104	L-isoleucine biosynthesis IV
alr2771	PWY-7111	pyruvate fermentation to isobutanol (engineered)
alr2782	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
alr2782	PWY-6416	quinate degradation II
alr2782	PWY-6707	gallate biosynthesis
alr2825	PWY-5833	CDP-4-dehydro-3,6-dideoxy-D-glucose biosynthesis
alr2825	PWY-5940	streptomycin biosynthesis
alr2881	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
alr2881	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
alr2881	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
alr2936	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
alr2936	PWY-7205	CMP phosphorylation
alr2938	PWY-6854	ethylene biosynthesis III (microbes)
alr2945	PWY-5686	UMP biosynthesis
alr2957	PWY-6938	NADH repair
alr2968	PWY-3081	L-lysine biosynthesis V
alr2968	PWY-6871	3-methylbutanol biosynthesis
alr2973	PWY-2723	trehalose degradation V
alr2973	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
alr2973	PWY-5661	GDP-glucose biosynthesis
alr2973	PWY-7238	sucrose biosynthesis II
alr2973	PWY-7385	1,3-propanediol biosynthesis (engineered)
alr2983	PWY-5686	UMP biosynthesis
alr3050	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
alr3050	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
alr3050	PWY-6164	3-dehydroquinate biosynthesis I
alr3086	PWY-5530	sorbitol biosynthesis II
alr3086	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
alr3088	PWY-6823	molybdenum cofactor biosynthesis
alr3088	PWY-6891	thiazole biosynthesis II (Bacillus)
alr3088	PWY-6892	thiazole biosynthesis I (E. coli)
alr3088	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
alr3125	PWY-5874	heme degradation
alr3125	PWY-5915	phycoerythrobilin biosynthesis I
alr3125	PWY-5917	phycocyanobilin biosynthesis
alr3125	PWY-7170	phytochromobilin biosynthesis
alr3139	PWY-5381	pyridine nucleotide cycling (plants)
alr3139	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
alr3139	PWY-6596	adenosine nucleotides degradation I
alr3139	PWY-6606	guanosine nucleotides degradation II
alr3139	PWY-6607	guanosine nucleotides degradation I
alr3139	PWY-6608	guanosine nucleotides degradation III
alr3139	PWY-7185	UTP and CTP dephosphorylation I
alr3146	PWY-5484	glycolysis II (from fructose 6-phosphate)
alr3185	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
alr3185	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
alr3201	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
alr3201	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
alr3216	PWY-5663	tetrahydrobiopterin biosynthesis I
alr3216	PWY-5664	tetrahydrobiopterin biosynthesis II
alr3216	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
alr3216	PWY-6703	preQ<sub>0</sub> biosynthesis
alr3216	PWY-6983	tetrahydrobiopterin biosynthesis III
alr3216	PWY-7442	drosopterin and aurodrosopterin biosynthesis
alr3230	PWY-7560	methylerythritol phosphate pathway II
alr3233	PWY-5958	acridone alkaloid biosynthesis
alr3233	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
alr3233	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
alr3246	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
alr3246	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
alr3265	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
alr3339	PWY-5686	UMP biosynthesis
alr3344	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
alr3344	PWY-5723	Rubisco shunt
alr3344	PWY-6891	thiazole biosynthesis II (Bacillus)
alr3344	PWY-6892	thiazole biosynthesis I (E. coli)
alr3344	PWY-6901	superpathway of glucose and xylose degradation
alr3344	PWY-7560	methylerythritol phosphate pathway II
alr3351	PWY-6840	homoglutathione biosynthesis
alr3351	PWY-7255	ergothioneine biosynthesis I (bacteria)
alr3395	PWY-6123	inosine-5'-phosphate biosynthesis I
alr3395	PWY-6124	inosine-5'-phosphate biosynthesis II
alr3395	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
alr3395	PWY-7234	inosine-5'-phosphate biosynthesis III
alr3402	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
alr3402	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
alr3402	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
alr3402	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
alr3402	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
alr3402	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
alr3402	PWY-7205	CMP phosphorylation
alr3402	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
alr3402	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
alr3402	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
alr3402	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
alr3402	PWY-7224	purine deoxyribonucleosides salvage
alr3402	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
alr3402	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
alr3424	PWY-5738	GDP-6-deoxy-D-talose biosynthesis
alr3424	PWY-5739	GDP-D-perosamine biosynthesis
alr3424	PWY-5740	GDP-L-colitose biosynthesis
alr3424	PWY-66	GDP-L-fucose biosynthesis I (from GDP-D-mannose)
alr3431	PWY-5751	phenylethanol biosynthesis
alr3441	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
alr3441	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
alr3443	PWY-5958	acridone alkaloid biosynthesis
alr3443	PWY-6543	4-aminobenzoate biosynthesis
alr3443	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
alr3443	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
alr3443	PWY-6722	candicidin biosynthesis
alr3450	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
alr3450	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
alr3450	PWY-5194	siroheme biosynthesis
alr3450	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
alr3464	PWY-6749	CMP-legionaminate biosynthesis I
alr3510	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
alr3510	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
alr3510	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
alr3512	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
alr3512	PWY-6148	tetrahydromethanopterin biosynthesis
alr3512	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
alr3512	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
alr3522	PWY-5101	L-isoleucine biosynthesis II
alr3522	PWY-6871	3-methylbutanol biosynthesis
alr3537	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
alr3537	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
alr3573	PWY-5198	factor 420 biosynthesis
alr3644	PWY-2941	L-lysine biosynthesis II
alr3644	PWY-2942	L-lysine biosynthesis III
alr3644	PWY-5097	L-lysine biosynthesis VI
alr3644	PWY-6559	spermidine biosynthesis II
alr3644	PWY-6562	norspermidine biosynthesis
alr3644	PWY-7153	grixazone biosynthesis
alr3667	PWY-5704	urea degradation II
alr3668	PWY-5704	urea degradation II
alr3670	PWY-5704	urea degradation II
alr3707	PWY-5917	phycocyanobilin biosynthesis
alr3724	PWY-5392	reductive TCA cycle II
alr3724	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
alr3724	PWY-5690	TCA cycle II (plants and fungi)
alr3724	PWY-5913	TCA cycle VI (obligate autotrophs)
alr3724	PWY-6728	methylaspartate cycle
alr3724	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
alr3724	PWY-7254	TCA cycle VII (acetate-producers)
alr3724	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
alr3727	PWY-101	photosynthesis light reactions
alr3727	PWY-6785	hydrogen production VIII
alr3742	PWY-101	photosynthesis light reactions
alr3742	PWY-6785	hydrogen production VIII
alr3769	PWY-5651	L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
alr3769	PWY-6309	L-tryptophan degradation XI (mammalian, via kynurenine)
alr3809	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
alr3809	PWY-5686	UMP biosynthesis
alr3809	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
alr3812	PWY-6502	oxidized GTP and dGTP detoxification
alr3871	PWY-5941	glycogen degradation II (eukaryotic)
alr3871	PWY-6724	starch degradation II
alr3871	PWY-6737	starch degradation V
alr3871	PWY-7238	sucrose biosynthesis II
alr3882	PWY-6829	tRNA methylation (yeast)
alr3882	PWY-7285	methylwyosine biosynthesis
alr3882	PWY-7286	7-(3-amino-3-carboxypropyl)-wyosine biosynthesis
alr3883	PWY-7560	methylerythritol phosphate pathway II
alr3887	PWY-4983	L-citrulline-nitric oxide cycle
alr3887	PWY-4984	urea cycle
alr3887	PWY-5	canavanine biosynthesis
alr3887	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
alr3887	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
alr3896	PWY-3961	phosphopantothenate biosynthesis II
alr3921	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
alr3936	PWY-5443	aminopropanol phosphate biosynthesis I
alr3993	PWY-6167	flavin biosynthesis II (archaea)
alr3993	PWY-6168	flavin biosynthesis III (fungi)
alr4036	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
alr4036	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
alr4046	PWY-4061	glutathione-mediated detoxification I
alr4046	PWY-6842	glutathione-mediated detoxification II
alr4046	PWY-7112	4-hydroxy-2-nonenal detoxification
alr4046	PWY-7533	gliotoxin biosynthesis
alr4112	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
alr4112	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
alr4123	PWY-5723	Rubisco shunt
alr4124	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
alr4124	PWY-5912	2'-deoxymugineic acid phytosiderophore biosynthesis
alr4129	PWY-5198	factor 420 biosynthesis
alr4161	PWY-6703	preQ<sub>0</sub> biosynthesis
alr4174	PWY-7180	2'-deoxy-&alpha;-D-ribose 1-phosphate degradation
alr4235	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
alr4238	PWY-4702	phytate degradation I
alr4268	PWY-5152	leucodelphinidin biosynthesis
alr4290	PWY-101	photosynthesis light reactions
alr4290	PWY-6785	hydrogen production VIII
alr4322	PWY-1622	formaldehyde assimilation I (serine pathway)
alr4322	PWY-5392	reductive TCA cycle II
alr4322	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
alr4322	PWY-5690	TCA cycle II (plants and fungi)
alr4322	PWY-5913	TCA cycle VI (obligate autotrophs)
alr4322	PWY-6728	methylaspartate cycle
alr4322	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
alr4322	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
alr4322	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
alr4334	PWY-7432	L-phenylalanine biosynthesis III (cytosolic, plants)
alr4351	PWY-7560	methylerythritol phosphate pathway II
alr4380	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
alr4380	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
alr4385	PWY-1042	glycolysis IV (plant cytosol)
alr4385	PWY-5484	glycolysis II (from fructose 6-phosphate)
alr4385	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
alr4385	PWY-7003	glycerol degradation to butanol
alr4386	PWY-6614	tetrahydrofolate biosynthesis
alr4448	PWY-6784	cellulose and hemicellulose degradation (cellulolosome)
alr4548	PWY-101	photosynthesis light reactions
alr4548	PWY-6785	hydrogen production VIII
alr4552	PWY-6936	seleno-amino acid biosynthesis
alr4582	PWY-6605	adenine and adenosine salvage II
alr4582	PWY-6610	adenine and adenosine salvage IV
alr4592	PWY-101	photosynthesis light reactions
alr4592	PWY-6785	hydrogen production VIII
alr4627	PWY-5101	L-isoleucine biosynthesis II
alr4627	PWY-5103	L-isoleucine biosynthesis III
alr4627	PWY-5104	L-isoleucine biosynthesis IV
alr4627	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
alr4627	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
alr4627	PWY-6389	(<i>S</i>)-acetoin biosynthesis
alr4627	PWY-7111	pyruvate fermentation to isobutanol (engineered)
alr4733	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
alr4733	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
alr4745	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
alr4745	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
alr4784	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
alr4798	PWY-4983	L-citrulline-nitric oxide cycle
alr4798	PWY-4984	urea cycle
alr4798	PWY-5	canavanine biosynthesis
alr4798	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
alr4798	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
alr4806	PWY-1622	formaldehyde assimilation I (serine pathway)
alr4806	PWY-181	photorespiration
alr4806	PWY-2161	folate polyglutamylation
alr4806	PWY-2201	folate transformations I
alr4806	PWY-3661	glycine betaine degradation I
alr4806	PWY-3661-1	glycine betaine degradation II (mammalian)
alr4806	PWY-3841	folate transformations II
alr4806	PWY-5497	purine nucleobases degradation II (anaerobic)
alr4807	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
alr4807	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
alr4807	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
alr4840	PWY-6871	3-methylbutanol biosynthesis
alr4841	PWY-2941	L-lysine biosynthesis II
alr4841	PWY-5097	L-lysine biosynthesis VI
alr4846	PWY-5381	pyridine nucleotide cycling (plants)
alr4846	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
alr4846	PWY-6596	adenosine nucleotides degradation I
alr4846	PWY-6606	guanosine nucleotides degradation II
alr4846	PWY-6607	guanosine nucleotides degradation I
alr4846	PWY-6608	guanosine nucleotides degradation III
alr4846	PWY-7185	UTP and CTP dephosphorylation I
alr4848	PWY-5523	5,6-dimethylbenzimidazole biosynthesis
alr4848	PWY-6167	flavin biosynthesis II (archaea)
alr4848	PWY-6168	flavin biosynthesis III (fungi)
alr4866	PWY-101	photosynthesis light reactions
alr4866	PWY-6785	hydrogen production VIII
alr4907	PWY-4981	L-proline biosynthesis II (from arginine)
alr4907	PWY-4984	urea cycle
alr4907	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
alr4995	PWY-4981	L-proline biosynthesis II (from arginine)
alr5000	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
alr5000	PWY-7177	UTP and CTP dephosphorylation II
alr5000	PWY-7185	UTP and CTP dephosphorylation I
alr5027	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
alr5027	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
alr5061	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
alr5061	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
alr5061	PWY-6896	thiamin salvage I
alr5061	PWY-6897	thiamin salvage II
alr5065	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
alr5065	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
alr5066	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
alr5066	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
alr5095	PWY-6703	preQ<sub>0</sub> biosynthesis
alr5099	PWY-5686	UMP biosynthesis
alr5103	PWY-5097	L-lysine biosynthesis VI
alr5154	PWY-101	photosynthesis light reactions
alr5154	PWY-6785	hydrogen production VIII
alr5155	PWY-101	photosynthesis light reactions
alr5155	PWY-6785	hydrogen production VIII
alr5197	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
alr5197	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
alr5197	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
alr5197	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
alr5198	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
alr5198	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
alr5198	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
alr5198	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
alr5252	PWY-5839	menaquinol-7 biosynthesis
alr5252	PWY-5844	menaquinol-9 biosynthesis
alr5252	PWY-5849	menaquinol-6 biosynthesis
alr5252	PWY-5890	menaquinol-10 biosynthesis
alr5252	PWY-5891	menaquinol-11 biosynthesis
alr5252	PWY-5892	menaquinol-12 biosynthesis
alr5252	PWY-5895	menaquinol-13 biosynthesis
alr5256	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
alr5256	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
alr5266	PWY-2781	<i>cis</i>-zeatin biosynthesis
alr5269	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
alr5269	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
alr5283	PWY-282	cuticular wax biosynthesis
alr5283	PWY-6622	heptadecane biosynthesis
alr5283	PWY-7032	alkane biosynthesis I
alr5284	PWY-6622	heptadecane biosynthesis
alr5284	PWY-7032	alkane biosynthesis I
alr5285	PWY-4381	fatty acid biosynthesis initiation I
alr5285	PWY-5743	3-hydroxypropanoate cycle
alr5285	PWY-5744	glyoxylate assimilation
alr5285	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
alr5285	PWY-6679	jadomycin biosynthesis
alr5285	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
alr5287	PWY-5663	tetrahydrobiopterin biosynthesis I
alr5287	PWY-5664	tetrahydrobiopterin biosynthesis II
alr5287	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
alr5287	PWY-6703	preQ<sub>0</sub> biosynthesis
alr5287	PWY-6983	tetrahydrobiopterin biosynthesis III
alr5287	PWY-7442	drosopterin and aurodrosopterin biosynthesis
alr5314	PWY-101	photosynthesis light reactions
alr5314	PWY-6785	hydrogen production VIII
alr5356	PWY-4381	fatty acid biosynthesis initiation I
alr5356	PWY-6799	fatty acid biosynthesis (plant mitochondria)
alr5356	PWY-723	alkylnitronates degradation
alr5356	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
asl2024	PWY-5025	indole-3-acetate biosynthesis IV (bacteria)
asl2024	PWY-581	indole-3-acetate biosynthesis II
asl2024	PWY-7308	acrylonitrile degradation I
asl2469	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
asl2469	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
asl2469	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
asr1714	PWY-5692	allantoin degradation to glyoxylate II
asr1714	PWY-5698	allantoin degradation to ureidoglycolate II (ammonia producing)
asr2474	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
asr2474	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
asr2474	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
asr2953	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
asr2953	PWY-6148	tetrahydromethanopterin biosynthesis
asr2953	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
asr2953	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
asr3463	PWY-101	photosynthesis light reactions
asr3463	PWY-6785	hydrogen production VIII
asr4154	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
asr4154	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
asr4549	PWY-7158	L-phenylalanine degradation V
