PAJ_0001 PWY-2941 L-lysine biosynthesis II
PAJ_0001 PWY-2942 L-lysine biosynthesis III
PAJ_0001 PWY-5097 L-lysine biosynthesis VI
PAJ_0001 PWY-6559 spermidine biosynthesis II
PAJ_0001 PWY-6562 norspermidine biosynthesis
PAJ_0001 PWY-7153 grixazone biosynthesis
PAJ_0002 PWY-702 L-methionine biosynthesis II
PAJ_0005 PWY-1861 formaldehyde assimilation II (RuMP Cycle)
PAJ_0005 PWY-5723 Rubisco shunt
PAJ_0014 PWY-5523 5,6-dimethylbenzimidazole biosynthesis
PAJ_0014 PWY-6167 flavin biosynthesis II (archaea)
PAJ_0014 PWY-6168 flavin biosynthesis III (fungi)
PAJ_0018 PWY-7560 methylerythritol phosphate pathway II
PAJ_0019 PWY-2941 L-lysine biosynthesis II
PAJ_0019 PWY-2942 L-lysine biosynthesis III
PAJ_0019 PWY-5097 L-lysine biosynthesis VI
PAJ_0020 PWY-5154 L-arginine biosynthesis III (via N-acetyl-L-citrulline)
PAJ_0020 PWY-5686 UMP biosynthesis
PAJ_0020 PWY-7400 L-arginine biosynthesis IV (archaebacteria)
PAJ_0021 PWY-5154 L-arginine biosynthesis III (via N-acetyl-L-citrulline)
PAJ_0021 PWY-5686 UMP biosynthesis
PAJ_0021 PWY-7400 L-arginine biosynthesis IV (archaebacteria)
PAJ_0026 PWY-3841 folate transformations II
PAJ_0026 PWY-6614 tetrahydrofolate biosynthesis
PAJ_0046 PWY-6163 chorismate biosynthesis from 3-dehydroquinate
PAJ_0046 PWY-6416 quinate degradation II
PAJ_0046 PWY-6707 gallate biosynthesis
PAJ_0048 PWY-6163 chorismate biosynthesis from 3-dehydroquinate
PAJ_0052 PWY-7396 butanol and isobutanol biosynthesis (engineered)
PAJ_0053 PWY-6871 3-methylbutanol biosynthesis
PAJ_0054 PWY-5101 L-isoleucine biosynthesis II
PAJ_0054 PWY-5103 L-isoleucine biosynthesis III
PAJ_0054 PWY-5104 L-isoleucine biosynthesis IV
PAJ_0054 PWY-5938 (R)-acetoin biosynthesis I
PAJ_0054 PWY-5939 (R)-acetoin biosynthesis II
PAJ_0054 PWY-6389 (S)-acetoin biosynthesis
PAJ_0054 PWY-7111 pyruvate fermentation to isobutanol (engineered)
PAJ_0055 PWY-5101 L-isoleucine biosynthesis II
PAJ_0055 PWY-5103 L-isoleucine biosynthesis III
PAJ_0055 PWY-5104 L-isoleucine biosynthesis IV
PAJ_0055 PWY-5938 (R)-acetoin biosynthesis I
PAJ_0055 PWY-5939 (R)-acetoin biosynthesis II
PAJ_0055 PWY-6389 (S)-acetoin biosynthesis
PAJ_0055 PWY-7111 pyruvate fermentation to isobutanol (engineered)
PAJ_0062 PWY-6386 UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
PAJ_0062 PWY-6387 UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing)
PAJ_0063 PWY-5265 peptidoglycan biosynthesis II (staphylococci)
PAJ_0063 PWY-6470 peptidoglycan biosynthesis V (β-lactam resistance)
PAJ_0063 PWY-6471 peptidoglycan biosynthesis IV (Enterococcus faecium)
PAJ_0064 PWY-6386 UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
PAJ_0064 PWY-6387 UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing)
PAJ_0066 PWY-5265 peptidoglycan biosynthesis II (staphylococci)
PAJ_0066 PWY-6385 peptidoglycan biosynthesis III (mycobacteria)
PAJ_0066 PWY-6470 peptidoglycan biosynthesis V (β-lactam resistance)
PAJ_0066 PWY-6471 peptidoglycan biosynthesis IV (Enterococcus faecium)
PAJ_0067 PWY-6386 UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
PAJ_0067 PWY-6387 UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing)
PAJ_0068 PWY-6386 UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
PAJ_0068 PWY-6387 UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing)
PAJ_0076 PWY-6502 oxidized GTP and dGTP detoxification
PAJ_0084 PWY-5316 nicotine biosynthesis
PAJ_0084 PWY-5381 pyridine nucleotide cycling (plants)
PAJ_0084 PWY-5653 NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
PAJ_0084 PWY-7342 superpathway of nicotine biosynthesis
PAJ_0091 PWY-6891 thiazole biosynthesis II (Bacillus)
PAJ_0091 PWY-6892 thiazole biosynthesis I (E. coli)
PAJ_0091 PWY-7560 methylerythritol phosphate pathway II
PAJ_0093 PWY-5046 2-oxoisovalerate decarboxylation to isobutanoyl-CoA
PAJ_0093 PWY-5084 2-oxoglutarate decarboxylation to succinyl-CoA
PAJ_0096 PWY-5747 2-methylcitrate cycle II
PAJ_0101 PWY-5265 peptidoglycan biosynthesis II (staphylococci)
PAJ_0101 PWY-6385 peptidoglycan biosynthesis III (mycobacteria)
PAJ_0101 PWY-6470 peptidoglycan biosynthesis V (β-lactam resistance)
PAJ_0101 PWY-6471 peptidoglycan biosynthesis IV (Enterococcus faecium)
PAJ_0103 PWY-6834 spermidine biosynthesis III
PAJ_0108 PWY-6599 guanine and guanosine salvage II
PAJ_0108 PWY-6609 adenine and adenosine salvage III
PAJ_0108 PWY-6610 adenine and adenosine salvage IV
PAJ_0108 PWY-6620 guanine and guanosine salvage
PAJ_0109 PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type
PAJ_0109 PWY-6142 gluconeogenesis II (Methanobacterium thermoautotrophicum)
PAJ_0109 PWY-7115 C4 photosynthetic carbon assimilation cycle, NAD-ME type
PAJ_0109 PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type
PAJ_0112 PWY-5155 β-alanine biosynthesis III
PAJ_0114 PWY-6654 phosphopantothenate biosynthesis III
PAJ_0115 PWY-6147 6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
PAJ_0115 PWY-6148 tetrahydromethanopterin biosynthesis
PAJ_0115 PWY-6797 6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
PAJ_0115 PWY-7539 6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
PAJ_0122 PWY-5265 peptidoglycan biosynthesis II (staphylococci)
PAJ_0122 PWY-6385 peptidoglycan biosynthesis III (mycobacteria)
PAJ_0122 PWY-6470 peptidoglycan biosynthesis V (β-lactam resistance)
PAJ_0122 PWY-6471 peptidoglycan biosynthesis IV (Enterococcus faecium)
PAJ_0127 PWY-5188 tetrapyrrole biosynthesis I (from glutamate)
PAJ_0130 PWY-6151 S-adenosyl-L-methionine cycle I
PAJ_0130 PWY-6153 autoinducer AI-2 biosynthesis I
PAJ_0130 PWY-6154 autoinducer AI-2 biosynthesis II (Vibrio)
PAJ_0133 PWY-6986 alginate degradation
PAJ_0143 PWY-7560 methylerythritol phosphate pathway II
PAJ_0150 PWY-5971 palmitate biosynthesis II (bacteria and plants)
PAJ_0150 PWY-5973 cis-vaccenate biosynthesis
PAJ_0150 PWY-5989 stearate biosynthesis II (bacteria and plants)
PAJ_0150 PWY-5994 palmitate biosynthesis I (animals and fungi)
PAJ_0150 PWY-6113 superpathway of mycolate biosynthesis
PAJ_0150 PWY-6282 palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
PAJ_0150 PWY-6519 8-amino-7-oxononanoate biosynthesis I
PAJ_0150 PWY-7388 octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
PAJ_0150 PWYG-321 mycolate biosynthesis
PAJ_0155 PWY-4381 fatty acid biosynthesis initiation I
PAJ_0155 PWY-5743 3-hydroxypropanoate cycle
PAJ_0155 PWY-5744 glyoxylate assimilation
PAJ_0155 PWY-5789 3-hydroxypropanoate/4-hydroxybutanate cycle
PAJ_0155 PWY-6679 jadomycin biosynthesis
PAJ_0155 PWY-7388 octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
PAJ_0173 PWY-5386 methylglyoxal degradation I
PAJ_0177 PWY-1861 formaldehyde assimilation II (RuMP Cycle)
PAJ_0177 PWY-5723 Rubisco shunt
PAJ_0180 PWY-6386 UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
PAJ_0180 PWY-6387 UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing)
PAJ_0189 PWY-5154 L-arginine biosynthesis III (via N-acetyl-L-citrulline)
PAJ_0192 PWY-5169 cyanurate degradation
PAJ_0192 PWY-5921 glutaminyl-tRNAgln biosynthesis via transamidation
PAJ_0193 PWY-4041 γ-glutamyl cycle
PAJ_0193 PWY-5826 hypoglycin biosynthesis
PAJ_0199 PWY-6832 2-aminoethylphosphonate degradation II
PAJ_0201 PWY-5691 urate degradation to allantoin I
PAJ_0201 PWY-7394 urate degradation to allantoin II
PAJ_0202 PWY-5691 urate degradation to allantoin I
PAJ_0202 PWY-7394 urate degradation to allantoin II
PAJ_0206 PWY-4361 S-methyl-5-thio-α-D-ribose 1-phosphate degradation
PAJ_0208 PWY-4361 S-methyl-5-thio-α-D-ribose 1-phosphate degradation
PAJ_0208 PWY-5389 3-methylthiopropanoate biosynthesis
PAJ_0209 PWY-4361 S-methyl-5-thio-α-D-ribose 1-phosphate degradation
PAJ_0209 PWY-7174 S-methyl-5-thio-α-D-ribose 1-phosphate degradation II
PAJ_0210 PWY-6754 S-methyl-5'-thioadenosine degradation I
PAJ_0212 PWY-6478 GDP-D-glycero-α-D-manno-heptose biosynthesis
PAJ_0237 PWY-6349 CDP-archaeol biosynthesis
PAJ_0258 PWY-7310 D-glucosaminate degradation
PAJ_0259 PWY-7310 D-glucosaminate degradation
PAJ_0267 PWY-3341 L-proline biosynthesis III
PAJ_0267 PWY-4981 L-proline biosynthesis II (from arginine)
PAJ_0267 PWY-6344 L-ornithine degradation II (Stickland reaction)
PAJ_0270 PWY-6163 chorismate biosynthesis from 3-dehydroquinate
PAJ_0281 PWY-5041 S-adenosyl-L-methionine cycle II
PAJ_0281 PWY-6151 S-adenosyl-L-methionine cycle I
PAJ_0281 PWY-6936 seleno-amino acid biosynthesis
PAJ_0281 PWY-702 L-methionine biosynthesis II
PAJ_0287 PWY-6012 acyl carrier protein metabolism I
PAJ_0288 PWY-6700 queuosine biosynthesis
PAJ_0289 PWY-6700 queuosine biosynthesis
PAJ_0296 PWY-6167 flavin biosynthesis II (archaea)
PAJ_0296 PWY-6168 flavin biosynthesis III (fungi)
PAJ_0298 PWY-6893 thiamin diphosphate biosynthesis II (Bacillus)
PAJ_0298 PWY-6894 thiamin diphosphate biosynthesis I (E. coli)
PAJ_0298 PWY-6896 thiamin salvage I
PAJ_0298 PWY-6897 thiamin salvage II
PAJ_0302 PWY-6891 thiazole biosynthesis II (Bacillus)
PAJ_0302 PWY-6892 thiazole biosynthesis I (E. coli)
PAJ_0302 PWY-7560 methylerythritol phosphate pathway II
PAJ_0307 PWY-6654 phosphopantothenate biosynthesis III
PAJ_0316 PWY-3781 aerobic respiration I (cytochrome c)
PAJ_0316 PWY-4521 arsenite oxidation I (respiratory)
PAJ_0316 PWY-6692 Fe(II) oxidation
PAJ_0316 PWY-7279 aerobic respiration II (cytochrome c) (yeast)
PAJ_0316 PWY-7544 pyruvate to cytochrome bo oxidase electron transfer
PAJ_0330 PWY-6703 preQ0 biosynthesis
PAJ_0353 PWY-6605 adenine and adenosine salvage II
PAJ_0353 PWY-6610 adenine and adenosine salvage IV
PAJ_0359 PWY-7219 adenosine ribonucleotides de novo biosynthesis
PAJ_0376 PWY-6123 inosine-5'-phosphate biosynthesis I
PAJ_0376 PWY-7234 inosine-5'-phosphate biosynthesis III
PAJ_0383 PWY-1722 formate reduction to 5,10-methylenetetrahydrofolate
PAJ_0383 PWY-2201 folate transformations I
PAJ_0383 PWY-3841 folate transformations II
PAJ_0383 PWY-5030 L-histidine degradation III
PAJ_0383 PWY-5497 purine nucleobases degradation II (anaerobic)
PAJ_0383 PWY-6613 tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
PAJ_0422 PWY-5083 NAD/NADH phosphorylation and dephosphorylation
PAJ_0422 PWY-7268 NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
PAJ_0422 PWY-7269 NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
PAJ_0439 PWY-6987 lipoate biosynthesis and incorporation III (Bacillus)
PAJ_0439 PWY-7381 lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
PAJ_0439 PWY-7382 lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
PAJ_0440 PWY-6987 lipoate biosynthesis and incorporation III (Bacillus)
PAJ_0440 PWY-7381 lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
PAJ_0442 PWY-5265 peptidoglycan biosynthesis II (staphylococci)
PAJ_0442 PWY-6471 peptidoglycan biosynthesis IV (Enterococcus faecium)
PAJ_0448 PWY-5381 pyridine nucleotide cycling (plants)
PAJ_0448 PWY-5653 NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
PAJ_0467 PWY-6906 chitin derivatives degradation
PAJ_0467 PWY-7077 N-acetyl-D-galactosamine degradation
PAJ_0467 PWY-7395 D-galactosamine and N-acetyl-D-galactosamine degradation
PAJ_0468 PWY-5514 UDP-N-acetyl-D-galactosamine biosynthesis II
PAJ_0468 PWY-6855 chitin degradation I (archaea)
PAJ_0468 PWY-6906 chitin derivatives degradation
PAJ_0469 PWY-7310 D-glucosaminate degradation
PAJ_0470 PWY-5188 tetrapyrrole biosynthesis I (from glutamate)
PAJ_0476 PWY-2723 trehalose degradation V
PAJ_0476 PWY-3801 sucrose degradation II (sucrose synthase)
PAJ_0476 PWY-5384 sucrose degradation IV (sucrose phosphorylase)
PAJ_0476 PWY-5661 GDP-glucose biosynthesis
PAJ_0476 PWY-5661-1 PAJ_0476
PAJ_0476 PWY-5940 streptomycin biosynthesis
PAJ_0476 PWY-5941 glycogen degradation II (eukaryotic)
PAJ_0476 PWY-622 starch biosynthesis
PAJ_0476 PWY-6731 starch degradation III
PAJ_0476 PWY-6737 starch degradation V
PAJ_0476 PWY-6749 CMP-legionaminate biosynthesis I
PAJ_0476 PWY-7238 sucrose biosynthesis II
PAJ_0476 PWY-7343 UDP-glucose biosynthesis
PAJ_0481 PWY-5663 tetrahydrobiopterin biosynthesis I
PAJ_0481 PWY-5664 tetrahydrobiopterin biosynthesis II
PAJ_0481 PWY-6147 6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
PAJ_0481 PWY-6703 preQ0 biosynthesis
PAJ_0481 PWY-6983 tetrahydrobiopterin biosynthesis III
PAJ_0481 PWY-7442 drosopterin and aurodrosopterin biosynthesis
PAJ_0493 PWY-3781 aerobic respiration I (cytochrome c)
PAJ_0493 PWY-4302 aerobic respiration III (alternative oxidase pathway)
PAJ_0493 PWY-561 superpathway of glyoxylate cycle and fatty acid degradation
PAJ_0493 PWY-5690 TCA cycle II (plants and fungi)
PAJ_0493 PWY-6728 methylaspartate cycle
PAJ_0493 PWY-6969 TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
PAJ_0493 PWY-7254 TCA cycle VII (acetate-producers)
PAJ_0493 PWY-7279 aerobic respiration II (cytochrome c) (yeast)
PAJ_0495 PWY-3781 aerobic respiration I (cytochrome c)
PAJ_0495 PWY-4302 aerobic respiration III (alternative oxidase pathway)
PAJ_0495 PWY-561 superpathway of glyoxylate cycle and fatty acid degradation
PAJ_0495 PWY-5690 TCA cycle II (plants and fungi)
PAJ_0495 PWY-6728 methylaspartate cycle
PAJ_0495 PWY-6969 TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
PAJ_0495 PWY-7254 TCA cycle VII (acetate-producers)
PAJ_0495 PWY-7279 aerobic respiration II (cytochrome c) (yeast)
PAJ_0496 PWY-5084 2-oxoglutarate decarboxylation to succinyl-CoA
PAJ_0497 PWY-5084 2-oxoglutarate decarboxylation to succinyl-CoA
PAJ_0498 PWY-5392 reductive TCA cycle II
PAJ_0498 PWY-5537 pyruvate fermentation to acetate V
PAJ_0498 PWY-5538 pyruvate fermentation to acetate VI
PAJ_0498 PWY-5690 TCA cycle II (plants and fungi)
PAJ_0498 PWY-5913 TCA cycle VI (obligate autotrophs)
PAJ_0498 PWY-6728 methylaspartate cycle
PAJ_0498 PWY-6969 TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
PAJ_0498 PWY-7384 anaerobic energy metabolism (invertebrates, mitochondrial)
PAJ_0500 PWY-5392 reductive TCA cycle II
PAJ_0500 PWY-5537 pyruvate fermentation to acetate V
PAJ_0500 PWY-5538 pyruvate fermentation to acetate VI
PAJ_0500 PWY-5690 TCA cycle II (plants and fungi)
PAJ_0500 PWY-5913 TCA cycle VI (obligate autotrophs)
PAJ_0500 PWY-6728 methylaspartate cycle
PAJ_0500 PWY-6969 TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
PAJ_0500 PWY-7384 anaerobic energy metabolism (invertebrates, mitochondrial)
PAJ_0503 PWY-7545 pyruvate to cytochrome bd terminal oxidase electron transfer
PAJ_0514 PWY-5316 nicotine biosynthesis
PAJ_0514 PWY-7342 superpathway of nicotine biosynthesis
PAJ_0520 PWY-1269 CMP-3-deoxy-D-manno-octulosonate biosynthesis I
PAJ_0520 PWY-5111 CMP-3-deoxy-D-manno-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
PAJ_0520 PWY-6164 3-dehydroquinate biosynthesis I
PAJ_0521 PWY-1622 formaldehyde assimilation I (serine pathway)
PAJ_0521 PWY-5484 glycolysis II (from fructose 6-phosphate)
PAJ_0522 PWY-2723 trehalose degradation V
PAJ_0522 PWY-6317 galactose degradation I (Leloir pathway)
PAJ_0522 PWY-6737 starch degradation V
PAJ_0523 PWY-3821 galactose degradation III
PAJ_0523 PWY-6317 galactose degradation I (Leloir pathway)
PAJ_0523 PWY-6527 stachyose degradation
PAJ_0524 PWY-6317 galactose degradation I (Leloir pathway)
PAJ_0524 PWY-6527 stachyose degradation
PAJ_0535 PWY-7380 biotin biosynthesis from 8-amino-7-oxononanoate II
PAJ_0536 PWY-6519 8-amino-7-oxononanoate biosynthesis I
PAJ_0536 PWY-6578 8-amino-7-oxononanoate biosynthesis III
PAJ_0536 PWY-7147 8-amino-7-oxononanoate biosynthesis II
PAJ_0537 PWY-6519 8-amino-7-oxononanoate biosynthesis I
PAJ_0538 PWY-7380 biotin biosynthesis from 8-amino-7-oxononanoate II
PAJ_0542 PWY-6823 molybdenum cofactor biosynthesis
PAJ_0546 PWY-6823 molybdenum cofactor biosynthesis
PAJ_0566 PWY-6386 UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
PAJ_0566 PWY-6387 UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing)
PAJ_0566 PWY-6454 vancomycin resistance I
PAJ_0566 PWY-6901 superpathway of glucose and xylose degradation
PAJ_0571 PWY-5123 trans, trans-farnesyl diphosphate biosynthesis
PAJ_0571 PWY-6174 mevalonate pathway II (archaea)
PAJ_0571 PWY-6383 mono-trans, poly-cis decaprenyl phosphate biosynthesis
PAJ_0571 PWY-6859 all-trans-farnesol biosynthesis
PAJ_0571 PWY-7102 bisabolene biosynthesis
PAJ_0571 PWY-7391 isoprene biosynthesis II (engineered)
PAJ_0571 PWY-7524 mevalonate pathway III (archaea)
PAJ_0571 PWY-7560 methylerythritol phosphate pathway II
PAJ_0571 PWY-922 mevalonate pathway I
PAJ_0585 PWY-5028 L-histidine degradation II
PAJ_0585 PWY-5030 L-histidine degradation III
PAJ_0586 PWY-5028 L-histidine degradation II
PAJ_0586 PWY-5030 L-histidine degradation III
PAJ_0590 PWY-5028 L-histidine degradation II
PAJ_0590 PWY-5030 L-histidine degradation III
PAJ_0614 PWY-6823 molybdenum cofactor biosynthesis
PAJ_0615 PWY-6823 molybdenum cofactor biosynthesis
PAJ_0623 PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type
PAJ_0623 PWY-6142 gluconeogenesis II (Methanobacterium thermoautotrophicum)
PAJ_0623 PWY-7115 C4 photosynthetic carbon assimilation cycle, NAD-ME type
PAJ_0623 PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type
PAJ_0626 PWY-5265 peptidoglycan biosynthesis II (staphylococci)
PAJ_0626 PWY-6471 peptidoglycan biosynthesis IV (Enterococcus faecium)
PAJ_0667 PWY-6281 L-selenocysteine biosynthesis II (archaea and eukaryotes)
PAJ_0670 PWY-5480 pyruvate fermentation to ethanol I
PAJ_0670 PWY-5485 pyruvate fermentation to acetate IV
PAJ_0670 PWY-5493 reductive monocarboxylic acid cycle
PAJ_0674 PWY-6163 chorismate biosynthesis from 3-dehydroquinate
PAJ_0675 PWY-7205 CMP phosphorylation
PAJ_0683 PWY-1269 CMP-3-deoxy-D-manno-octulosonate biosynthesis I
PAJ_0683 PWY-5111 CMP-3-deoxy-D-manno-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
PAJ_0692 PWY-5913 TCA cycle VI (obligate autotrophs)
PAJ_0692 PWY-6318 L-phenylalanine degradation IV (mammalian, via side chain)
PAJ_0692 PWY-6638 sulfolactate degradation III
PAJ_0692 PWY-6642 (R)-cysteate degradation
PAJ_0692 PWY-6643 coenzyme M biosynthesis II
PAJ_0692 PWY-7115 C4 photosynthetic carbon assimilation cycle, NAD-ME type
PAJ_0692 PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type
PAJ_0692 PWY-7383 anaerobic energy metabolism (invertebrates, cytosol)
PAJ_0695 PWY-5381 pyridine nucleotide cycling (plants)
PAJ_0704 PWY-5686 UMP biosynthesis
PAJ_0713 PWY-5971 palmitate biosynthesis II (bacteria and plants)
PAJ_0713 PWY-5973 cis-vaccenate biosynthesis
PAJ_0713 PWY-5989 stearate biosynthesis II (bacteria and plants)
PAJ_0713 PWY-5994 palmitate biosynthesis I (animals and fungi)
PAJ_0713 PWY-6113 superpathway of mycolate biosynthesis
PAJ_0713 PWY-6282 palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
PAJ_0713 PWY-6519 8-amino-7-oxononanoate biosynthesis I
PAJ_0713 PWY-7388 octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
PAJ_0713 PWYG-321 mycolate biosynthesis
PAJ_0733 PWY-6785 hydrogen production VIII
PAJ_0740 PWY-6157 autoinducer AI-1 biosynthesis
PAJ_0744 PWY-5269 cardiolipin biosynthesis II
PAJ_0744 PWY-5668 cardiolipin biosynthesis I
PAJ_0799 PWY-5686 UMP biosynthesis
PAJ_0827 PWY-4381 fatty acid biosynthesis initiation I
PAJ_0828 PWY-4381 fatty acid biosynthesis initiation I
PAJ_0828 PWY-6799 fatty acid biosynthesis (plant mitochondria)
PAJ_0828 PWY-7388 octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
PAJ_0829 PWY-5367 petroselinate biosynthesis
PAJ_0829 PWY-5971 palmitate biosynthesis II (bacteria and plants)
PAJ_0829 PWY-5973 cis-vaccenate biosynthesis
PAJ_0829 PWY-5989 stearate biosynthesis II (bacteria and plants)
PAJ_0829 PWY-5994 palmitate biosynthesis I (animals and fungi)
PAJ_0829 PWY-6113 superpathway of mycolate biosynthesis
PAJ_0829 PWY-6282 palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
PAJ_0829 PWY-6519 8-amino-7-oxononanoate biosynthesis I
PAJ_0829 PWY-6951 PAJ_0829
PAJ_0829 PWY-7053 docosahexaenoate biosynthesis I (lower eukaryotes)
PAJ_0829 PWY-7388 octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
PAJ_0829 PWYG-321 mycolate biosynthesis
PAJ_0832 PWY-6543 4-aminobenzoate biosynthesis
PAJ_0832 PWY-6722 candicidin biosynthesis
PAJ_0834 PWY-6545 pyrimidine deoxyribonucleotides de novo biosynthesis III
PAJ_0834 PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I
PAJ_0834 PWY-7187 pyrimidine deoxyribonucleotides de novo biosynthesis II
PAJ_0834 PWY-7197 pyrimidine deoxyribonucleotide phosphorylation
PAJ_0834 PWY-7198 pyrimidine deoxyribonucleotides de novo biosynthesis IV
PAJ_0834 PWY-7210 pyrimidine deoxyribonucleotides biosynthesis from CTP
PAJ_0837 PWY-7310 D-glucosaminate degradation
PAJ_0843 PWY-6902 chitin degradation II
PAJ_0858 PWY-6123 inosine-5'-phosphate biosynthesis I
PAJ_0858 PWY-6124 inosine-5'-phosphate biosynthesis II
PAJ_0858 PWY-7219 adenosine ribonucleotides de novo biosynthesis
PAJ_0858 PWY-7234 inosine-5'-phosphate biosynthesis III
PAJ_0863 PWY-5913 TCA cycle VI (obligate autotrophs)
PAJ_0863 PWY-6549 L-glutamine biosynthesis III
PAJ_0863 PWY-6728 methylaspartate cycle
PAJ_0863 PWY-6969 TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
PAJ_0863 PWY-7124 ethylene biosynthesis V (engineered)
PAJ_0863 PWY-7254 TCA cycle VII (acetate-producers)
PAJ_0863 PWY-7268 NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
PAJ_0888 PWY-6891 thiazole biosynthesis II (Bacillus)
PAJ_0888 PWY-6892 thiazole biosynthesis I (E. coli)
PAJ_0888 PWY-7560 methylerythritol phosphate pathway II
PAJ_0890 PWY-4261 glycerol degradation I
PAJ_0903 PWY-6698 oxalate degradation V
PAJ_0907 PWY-7310 D-glucosaminate degradation
PAJ_0924 PWY-5101 L-isoleucine biosynthesis II
PAJ_0924 PWY-5103 L-isoleucine biosynthesis III
PAJ_0924 PWY-5104 L-isoleucine biosynthesis IV
PAJ_0924 PWY-7111 pyruvate fermentation to isobutanol (engineered)
PAJ_0925 PWY-5921 glutaminyl-tRNAgln biosynthesis via transamidation
PAJ_0967 PWY-5041 S-adenosyl-L-methionine cycle II
PAJ_0967 PWY-6151 S-adenosyl-L-methionine cycle I
PAJ_0967 PWY-6936 seleno-amino acid biosynthesis
PAJ_0967 PWY-702 L-methionine biosynthesis II
PAJ_0989 PWY-7560 methylerythritol phosphate pathway II
PAJ_0991 PWY-5188 tetrapyrrole biosynthesis I (from glutamate)
PAJ_0996 PWY-1269 CMP-3-deoxy-D-manno-octulosonate biosynthesis I
PAJ_0996 PWY-5111 CMP-3-deoxy-D-manno-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
PAJ_1012 PWY-6683 sulfate reduction III (assimilatory)
PAJ_1014 PWY-5194 siroheme biosynthesis
PAJ_1014 PWY-7377 cob(II)yrinate a,c-diamide biosynthesis I (early cobalt insertion)
PAJ_1056 PWY-1269 CMP-3-deoxy-D-manno-octulosonate biosynthesis I
PAJ_1056 PWY-5111 CMP-3-deoxy-D-manno-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
PAJ_1056 PWY-6164 3-dehydroquinate biosynthesis I
PAJ_1058 PWY-5484 glycolysis II (from fructose 6-phosphate)
PAJ_1060 PWY-6386 UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
PAJ_1060 PWY-6387 UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing)
PAJ_1065 PWY-6823 molybdenum cofactor biosynthesis
PAJ_1065 PWY-6891 thiazole biosynthesis II (Bacillus)
PAJ_1065 PWY-6892 thiazole biosynthesis I (E. coli)
PAJ_1065 PWY-7250 [2Fe-2S] iron-sulfur cluster biosynthesis
PAJ_1069 PWY-1042 glycolysis IV (plant cytosol)
PAJ_1069 PWY-2221 Entner-Doudoroff pathway III (semi-phosphorylative)
PAJ_1069 PWY-5484 glycolysis II (from fructose 6-phosphate)
PAJ_1069 PWY-5723 Rubisco shunt
PAJ_1069 PWY-6142 gluconeogenesis II (Methanobacterium thermoautotrophicum)
PAJ_1069 PWY-6886 1-butanol autotrophic biosynthesis
PAJ_1069 PWY-6901 superpathway of glucose and xylose degradation
PAJ_1069 PWY-7003 glycerol degradation to butanol
PAJ_1069 PWY-7218 photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
PAJ_1069 PWY-7383 anaerobic energy metabolism (invertebrates, cytosol)
PAJ_1071 PWY-6167 flavin biosynthesis II (archaea)
PAJ_1071 PWY-6168 flavin biosynthesis III (fungi)
PAJ_1071 PWY-7219 adenosine ribonucleotides de novo biosynthesis
PAJ_1081 PWY-5386 methylglyoxal degradation I
PAJ_1085 PWY-6854 ethylene biosynthesis III (microbes)
PAJ_1096 PWY-2661 trehalose biosynthesis V
PAJ_1097 PWY-2661 trehalose biosynthesis V
PAJ_1098 PWY-5506 methanol oxidation to formaldehyde IV
PAJ_1107 PWY-901 methylglyoxal degradation II
PAJ_1112 PWY-5691 urate degradation to allantoin I
PAJ_1112 PWY-7394 urate degradation to allantoin II
PAJ_1114 PWY-7204 pyridoxal 5'-phosphate salvage II (plants)
PAJ_1114 PWY-7282 4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
PAJ_1116 PWY-7204 pyridoxal 5'-phosphate salvage II (plants)
PAJ_1116 PWY-7282 4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
PAJ_1119 PWY-7176 UTP and CTP de novo biosynthesis
PAJ_1119 PWY-7177 UTP and CTP dephosphorylation II
PAJ_1119 PWY-7185 UTP and CTP dephosphorylation I
PAJ_1150 PWY-7425 2-chloroacrylate degradation I
PAJ_1160 PWY-4261 glycerol degradation I
PAJ_1166 PWY-6609 adenine and adenosine salvage III
PAJ_1166 PWY-6611 adenine and adenosine salvage V
PAJ_1166 PWY-7179 purine deoxyribonucleosides degradation I
PAJ_1166 PWY-7179-1 purine deoxyribonucleosides degradation
PAJ_1168 PWY-3861 mannitol degradation II
PAJ_1168 PWY-3881 mannitol biosynthesis
PAJ_1168 PWY-5659 GDP-mannose biosynthesis
PAJ_1168 PWY-7456 mannan degradation
PAJ_1168 PWY-882 L-ascorbate biosynthesis I (L-galactose pathway)
PAJ_1169 PWY-5392 reductive TCA cycle II
PAJ_1169 PWY-561 superpathway of glyoxylate cycle and fatty acid degradation
PAJ_1169 PWY-5690 TCA cycle II (plants and fungi)
PAJ_1169 PWY-5913 TCA cycle VI (obligate autotrophs)
PAJ_1169 PWY-6728 methylaspartate cycle
PAJ_1169 PWY-6969 TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
PAJ_1169 PWY-7254 TCA cycle VII (acetate-producers)
PAJ_1169 PWY-7384 anaerobic energy metabolism (invertebrates, mitochondrial)
PAJ_1185 PWY-6871 3-methylbutanol biosynthesis
PAJ_1186 PWY-7533 gliotoxin biosynthesis
PAJ_1188 PWY-6420 pyrroloquinoline quinone biosynthesis
PAJ_1190 PWY-6823 molybdenum cofactor biosynthesis
PAJ_1193 PWY-1042 glycolysis IV (plant cytosol)
PAJ_1193 PWY-1861 formaldehyde assimilation II (RuMP Cycle)
PAJ_1193 PWY-5484 glycolysis II (from fructose 6-phosphate)
PAJ_1193 PWY-7385 1,3-propanediol biosynthesis (engineered)
PAJ_1201 PWY-5506 methanol oxidation to formaldehyde IV
PAJ_1223 PWY-4202 arsenate detoxification I (glutaredoxin)
PAJ_1223 PWY-4621 arsenate detoxification II (glutaredoxin)
PAJ_1235 PWY-5491 diethylphosphate degradation
PAJ_1245 PWY-5941 glycogen degradation II (eukaryotic)
PAJ_1245 PWY-6724 starch degradation II
PAJ_1245 PWY-6737 starch degradation V
PAJ_1245 PWY-7238 sucrose biosynthesis II
PAJ_1246 PWY-5941 glycogen degradation II (eukaryotic)
PAJ_1246 PWY-622 starch biosynthesis
PAJ_1246 PWY-6731 starch degradation III
PAJ_1246 PWY-6737 starch degradation V
PAJ_1246 PWY-7238 sucrose biosynthesis II
PAJ_1269 PWY-5921 glutaminyl-tRNAgln biosynthesis via transamidation
PAJ_1275 PWY-7383 anaerobic energy metabolism (invertebrates, cytosol)
PAJ_1287 PWY-6157 autoinducer AI-1 biosynthesis
PAJ_1295 PWY-5497 purine nucleobases degradation II (anaerobic)
PAJ_1295 PWY-5695 urate biosynthesis/inosine 5'-phosphate degradation
PAJ_1295 PWY-6538 caffeine degradation III (bacteria, via demethylation)
PAJ_1295 PWY-6596 adenosine nucleotides degradation I
PAJ_1295 PWY-6606 guanosine nucleotides degradation II
PAJ_1295 PWY-6607 guanosine nucleotides degradation I
PAJ_1295 PWY-6608 guanosine nucleotides degradation III
PAJ_1295 PWY-6999 theophylline degradation
PAJ_1296 PWY-5497 purine nucleobases degradation II (anaerobic)
PAJ_1296 PWY-6606 guanosine nucleotides degradation II
PAJ_1296 PWY-6608 guanosine nucleotides degradation III
PAJ_1296 PWY-7442 drosopterin and aurodrosopterin biosynthesis
PAJ_1307 PWY-7380 biotin biosynthesis from 8-amino-7-oxononanoate II
PAJ_1359 PWY-5971 palmitate biosynthesis II (bacteria and plants)
PAJ_1359 PWY-5973 cis-vaccenate biosynthesis
PAJ_1359 PWY-5989 stearate biosynthesis II (bacteria and plants)
PAJ_1359 PWY-6113 superpathway of mycolate biosynthesis
PAJ_1359 PWY-6282 palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
PAJ_1359 PWY-6519 8-amino-7-oxononanoate biosynthesis I
PAJ_1359 PWY-7096 triclosan resistance
PAJ_1359 PWYG-321 mycolate biosynthesis
PAJ_1362 PWY-7310 D-glucosaminate degradation
PAJ_1369 PWY-6961 L-ascorbate degradation II (bacterial, aerobic)
PAJ_1372 PWY-5686 UMP biosynthesis
PAJ_1376 PWY-6168 flavin biosynthesis III (fungi)
PAJ_1376 PWY-7539 6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
PAJ_1383 PWY-5508 adenosylcobalamin biosynthesis from cobyrinate a,c-diamide II
PAJ_1383 PWY-5509 adenosylcobalamin biosynthesis from cobyrinate a,c-diamide I
PAJ_1383 PWY-6268 adenosylcobalamin salvage from cobalamin
PAJ_1383 PWY-6269 adenosylcobalamin salvage from cobinamide II
PAJ_1389 PWY-5958 acridone alkaloid biosynthesis
PAJ_1389 PWY-6660 2-heptyl-3-hydroxy-4(1H)-quinolone biosynthesis
PAJ_1389 PWY-6661 4-hydroxy-2(1H)-quinolone biosynthesis
PAJ_1411 PWY-3162 L-tryptophan degradation V (side chain pathway)
PAJ_1411 PWY-5057 L-valine degradation II
PAJ_1411 PWY-5076 L-leucine degradation III
PAJ_1411 PWY-5078 L-isoleucine degradation II
PAJ_1411 PWY-5079 L-phenylalanine degradation III
PAJ_1411 PWY-5082 L-methionine degradation III
PAJ_1411 PWY-5162 2-oxopentenoate degradation
PAJ_1411 PWY-5436 L-threonine degradation IV
PAJ_1411 PWY-5480 pyruvate fermentation to ethanol I
PAJ_1411 PWY-5486 pyruvate fermentation to ethanol II
PAJ_1411 PWY-5751 phenylethanol biosynthesis
PAJ_1411 PWY-6028 acetoin degradation
PAJ_1411 PWY-6313 serotonin degradation
PAJ_1411 PWY-6333 acetaldehyde biosynthesis I
PAJ_1411 PWY-6342 noradrenaline and adrenaline degradation
PAJ_1411 PWY-6587 pyruvate fermentation to ethanol III
PAJ_1411 PWY-6802 salidroside biosynthesis
PAJ_1411 PWY-6871 3-methylbutanol biosynthesis
PAJ_1411 PWY-7013 L-1,2-propanediol degradation
PAJ_1411 PWY-7085 triethylamine degradation
PAJ_1411 PWY-7111 pyruvate fermentation to isobutanol (engineered)
PAJ_1411 PWY-7118 chitin degradation to ethanol
PAJ_1411 PWY-7180 2'-deoxy-α-D-ribose 1-phosphate degradation
PAJ_1411 PWY-7396 butanol and isobutanol biosynthesis (engineered)
PAJ_1411 PWY-7557 dehydrodiconiferyl alcohol degradation
PAJ_1412 PWY-7199 pyrimidine deoxyribonucleosides salvage
PAJ_1415 PWY-7346 UDP-α-D-glucuronate biosynthesis (from UDP-glucose)
PAJ_1416 PWY-3801 sucrose degradation II (sucrose synthase)
PAJ_1416 PWY-6527 stachyose degradation
PAJ_1416 PWY-6981 chitin biosynthesis
PAJ_1416 PWY-7238 sucrose biosynthesis II
PAJ_1416 PWY-7343 UDP-glucose biosynthesis
PAJ_1420 PWY-2201 folate transformations I
PAJ_1420 PWY-5497 purine nucleobases degradation II (anaerobic)
PAJ_1431 PWY-1042 glycolysis IV (plant cytosol)
PAJ_1431 PWY-5484 glycolysis II (from fructose 6-phosphate)
PAJ_1431 PWY-6901 superpathway of glucose and xylose degradation
PAJ_1431 PWY-7003 glycerol degradation to butanol
PAJ_1432 PWY-2723 trehalose degradation V
PAJ_1432 PWY-5384 sucrose degradation IV (sucrose phosphorylase)
PAJ_1432 PWY-5661 GDP-glucose biosynthesis
PAJ_1432 PWY-5940 streptomycin biosynthesis
PAJ_1432 PWY-621 sucrose degradation III (sucrose invertase)
PAJ_1432 PWY-622 starch biosynthesis
PAJ_1432 PWY-6731 starch degradation III
PAJ_1432 PWY-6737 starch degradation V
PAJ_1432 PWY-6981 chitin biosynthesis
PAJ_1432 PWY-7238 sucrose biosynthesis II
PAJ_1432 PWY-7343 UDP-glucose biosynthesis
PAJ_1441 PWY-7383 anaerobic energy metabolism (invertebrates, cytosol)
PAJ_1459 PWY-5958 acridone alkaloid biosynthesis
PAJ_1459 PWY-6543 4-aminobenzoate biosynthesis
PAJ_1459 PWY-6660 2-heptyl-3-hydroxy-4(1H)-quinolone biosynthesis
PAJ_1459 PWY-6661 4-hydroxy-2(1H)-quinolone biosynthesis
PAJ_1459 PWY-6722 candicidin biosynthesis
PAJ_1464 PWY-7310 D-glucosaminate degradation
PAJ_1483 PWY-3722 glycine betaine biosynthesis II (Gram-positive bacteria)
PAJ_1483 PWY-7494 choline degradation IV
PAJ_1484 PWY-3722 glycine betaine biosynthesis II (Gram-positive bacteria)
PAJ_1484 PWY-7494 choline degradation IV
PAJ_1493 PWY-7310 D-glucosaminate degradation
PAJ_1504 PWY-2221 Entner-Doudoroff pathway III (semi-phosphorylative)
PAJ_1504 PWY-6507 4-deoxy-L-threo-hex-4-enopyranuronate degradation
PAJ_1504 PWY-7242 D-fructuronate degradation
PAJ_1504 PWY-7310 D-glucosaminate degradation
PAJ_1505 PWY-7268 NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
PAJ_1507 PWY-1042 glycolysis IV (plant cytosol)
PAJ_1507 PWY-2221 Entner-Doudoroff pathway III (semi-phosphorylative)
PAJ_1507 PWY-5484 glycolysis II (from fructose 6-phosphate)
PAJ_1507 PWY-5723 Rubisco shunt
PAJ_1507 PWY-6142 gluconeogenesis II (Methanobacterium thermoautotrophicum)
PAJ_1507 PWY-6886 1-butanol autotrophic biosynthesis
PAJ_1507 PWY-6901 superpathway of glucose and xylose degradation
PAJ_1507 PWY-7003 glycerol degradation to butanol
PAJ_1507 PWY-7218 photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
PAJ_1507 PWY-7383 anaerobic energy metabolism (invertebrates, cytosol)
PAJ_1526 PWY-6349 CDP-archaeol biosynthesis
PAJ_1529 PWY-6936 seleno-amino acid biosynthesis
PAJ_1566 PWY-5737 (5R)-carbapenem carboxylate biosynthesis
PAJ_1566 PWY-6853 ethylene biosynthesis II (microbes)
PAJ_1566 PWY-6922 L-Nδ-acetylornithine biosynthesis
PAJ_1578 PWY-3221 dTDP-L-rhamnose biosynthesis II
PAJ_1578 PWY-6808 dTDP-D-forosamine biosynthesis
PAJ_1578 PWY-6942 dTDP-D-desosamine biosynthesis
PAJ_1578 PWY-6953 dTDP-3-acetamido-3,6-dideoxy-α-D-galactose biosynthesis
PAJ_1578 PWY-6973 dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
PAJ_1578 PWY-6974 dTDP-L-olivose biosynthesis
PAJ_1578 PWY-6976 dTDP-L-mycarose biosynthesis
PAJ_1578 PWY-7104 dTDP-L-megosamine biosynthesis
PAJ_1578 PWY-7301 dTDP-β-L-noviose biosynthesis
PAJ_1578 PWY-7312 dTDP-D-β-fucofuranose biosynthesis
PAJ_1578 PWY-7315 dTDP-N-acetylthomosamine biosynthesis
PAJ_1578 PWY-7316 dTDP-N-acetylviosamine biosynthesis
PAJ_1578 PWY-7318 dTDP-3-acetamido-3,6-dideoxy-α-D-glucose biosynthesis
PAJ_1578 PWY-7413 dTDP-6-deoxy-α-D-allose biosynthesis
PAJ_1578 PWY-7414 dTDP-α-D-mycaminose biosynthesis
PAJ_1578 PWY-7440 dTDP-β-L-4-epi-vancosamine biosynthesis
PAJ_1582 PWY-282 cuticular wax biosynthesis
PAJ_1586 PWY-6891 thiazole biosynthesis II (Bacillus)
PAJ_1586 PWY-6892 thiazole biosynthesis I (E. coli)
PAJ_1586 PWY-7560 methylerythritol phosphate pathway II
PAJ_1601 PWY-842 starch degradation I
PAJ_1610 PWY-7219 adenosine ribonucleotides de novo biosynthesis
PAJ_1623 PWY-5656 mannosylglycerate biosynthesis I
PAJ_1643 PWY-7310 D-glucosaminate degradation
PAJ_1644 PWY-7310 D-glucosaminate degradation
PAJ_1676 PWY-6617 adenosine nucleotides degradation III
PAJ_1692 PWY-5532 adenosine nucleotides degradation IV
PAJ_1693 PWY-7399 methylphosphonate degradation II
PAJ_1694 PWY-7399 methylphosphonate degradation II
PAJ_1696 PWY-7399 methylphosphonate degradation II
PAJ_1700 PWY-7399 methylphosphonate degradation II
PAJ_1716 PWY-7425 2-chloroacrylate degradation I
PAJ_1730 PWY-6386 UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
PAJ_1730 PWY-6387 UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing)
PAJ_1736 PWY-4261 glycerol degradation I
PAJ_1746 PWY-6654 phosphopantothenate biosynthesis III
PAJ_1750 PWY-5265 peptidoglycan biosynthesis II (staphylococci)
PAJ_1750 PWY-6471 peptidoglycan biosynthesis IV (Enterococcus faecium)
PAJ_1759 PWY-381 nitrate reduction II (assimilatory)
PAJ_1759 PWY-5675 nitrate reduction V (assimilatory)
PAJ_1759 PWY-6549 L-glutamine biosynthesis III
PAJ_1759 PWY-6963 ammonia assimilation cycle I
PAJ_1759 PWY-6964 ammonia assimilation cycle II
PAJ_1787 PWY-3821 galactose degradation III
PAJ_1787 PWY-6317 galactose degradation I (Leloir pathway)
PAJ_1787 PWY-6397 mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
PAJ_1787 PWY-6527 stachyose degradation
PAJ_1787 PWY-7328 superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
PAJ_1787 PWY-7344 UDP-D-galactose biosynthesis
PAJ_1803 PWY-7187 pyrimidine deoxyribonucleotides de novo biosynthesis II
PAJ_1804 PWY-7193 pyrimidine ribonucleosides salvage I
PAJ_1815 PWY-5083 NAD/NADH phosphorylation and dephosphorylation
PAJ_1815 PWY-7268 NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
PAJ_1815 PWY-7269 NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
PAJ_1818 PWY-6910 hydroxymethylpyrimidine salvage
PAJ_1818 PWY-7356 thiamin salvage IV (yeast)
PAJ_1818 PWY-7357 thiamin formation from pyrithiamine and oxythiamine (yeast)
PAJ_1819 PWY-6897 thiamin salvage II
PAJ_1819 PWY-7353 4-methyl-5(β-hydroxyethyl)thiazole salvage (yeast)
PAJ_1819 PWY-7357 thiamin formation from pyrithiamine and oxythiamine (yeast)
PAJ_1830 PWY-6556 pyrimidine ribonucleosides salvage II
PAJ_1830 PWY-7181 pyrimidine deoxyribonucleosides degradation
PAJ_1830 PWY-7193 pyrimidine ribonucleosides salvage I
PAJ_1830 PWY-7199 pyrimidine deoxyribonucleosides salvage
PAJ_1838 PWY-5663 tetrahydrobiopterin biosynthesis I
PAJ_1838 PWY-5664 tetrahydrobiopterin biosynthesis II
PAJ_1838 PWY-6147 6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
PAJ_1838 PWY-6703 preQ0 biosynthesis
PAJ_1838 PWY-6983 tetrahydrobiopterin biosynthesis III
PAJ_1838 PWY-7442 drosopterin and aurodrosopterin biosynthesis
PAJ_1841 PWY-1801 formaldehyde oxidation II (glutathione-dependent)
PAJ_1841 PWY-3162 L-tryptophan degradation V (side chain pathway)
PAJ_1841 PWY-5057 L-valine degradation II
PAJ_1841 PWY-5076 L-leucine degradation III
PAJ_1841 PWY-5078 L-isoleucine degradation II
PAJ_1841 PWY-5079 L-phenylalanine degradation III
PAJ_1841 PWY-5082 L-methionine degradation III
PAJ_1841 PWY-5480 pyruvate fermentation to ethanol I
PAJ_1841 PWY-5486 pyruvate fermentation to ethanol II
PAJ_1841 PWY-5751 phenylethanol biosynthesis
PAJ_1841 PWY-6028 acetoin degradation
PAJ_1841 PWY-6313 serotonin degradation
PAJ_1841 PWY-6333 acetaldehyde biosynthesis I
PAJ_1841 PWY-6342 noradrenaline and adrenaline degradation
PAJ_1841 PWY-6587 pyruvate fermentation to ethanol III
PAJ_1841 PWY-6802 salidroside biosynthesis
PAJ_1841 PWY-6871 3-methylbutanol biosynthesis
PAJ_1841 PWY-7013 L-1,2-propanediol degradation
PAJ_1841 PWY-7111 pyruvate fermentation to isobutanol (engineered)
PAJ_1841 PWY-7118 chitin degradation to ethanol
PAJ_1841 PWY-7396 butanol and isobutanol biosynthesis (engineered)
PAJ_1841 PWY-7557 dehydrodiconiferyl alcohol degradation
PAJ_1842 PWY-1801 formaldehyde oxidation II (glutathione-dependent)
PAJ_1850 PWY-7310 D-glucosaminate degradation
PAJ_1903 PWY-5855 ubiquinol-7 biosynthesis (prokaryotic)
PAJ_1903 PWY-5856 ubiquinol-9 biosynthesis (prokaryotic)
PAJ_1903 PWY-5857 ubiquinol-10 biosynthesis (prokaryotic)
PAJ_1903 PWY-5870 ubiquinol-8 biosynthesis (eukaryotic)
PAJ_1903 PWY-5871 ubiquinol-9 biosynthesis (eukaryotic)
PAJ_1903 PWY-5872 ubiquinol-10 biosynthesis (eukaryotic)
PAJ_1903 PWY-5873 ubiquinol-7 biosynthesis (eukaryotic)
PAJ_1903 PWY-6708 ubiquinol-8 biosynthesis (prokaryotic)
PAJ_1903 PWY-7230 ubiquinol-6 biosynthesis from 4-aminobenzoate (eukaryotic)
PAJ_1903 PWY-7233 ubiquinol-6 bypass biosynthesis (eukaryotic)
PAJ_1904 PWY-6545 pyrimidine deoxyribonucleotides de novo biosynthesis III
PAJ_1904 PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I
PAJ_1904 PWY-7198 pyrimidine deoxyribonucleotides de novo biosynthesis IV
PAJ_1904 PWY-7210 pyrimidine deoxyribonucleotides biosynthesis from CTP
PAJ_1904 PWY-7220 adenosine deoxyribonucleotides de novo biosynthesis II
PAJ_1904 PWY-7222 guanosine deoxyribonucleotides de novo biosynthesis II
PAJ_1904 PWY-7226 guanosine deoxyribonucleotides de novo biosynthesis I
PAJ_1904 PWY-7227 adenosine deoxyribonucleotides de novo biosynthesis
PAJ_1905 PWY-6545 pyrimidine deoxyribonucleotides de novo biosynthesis III
PAJ_1905 PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I
PAJ_1905 PWY-7198 pyrimidine deoxyribonucleotides de novo biosynthesis IV
PAJ_1905 PWY-7210 pyrimidine deoxyribonucleotides biosynthesis from CTP
PAJ_1905 PWY-7220 adenosine deoxyribonucleotides de novo biosynthesis II
PAJ_1905 PWY-7222 guanosine deoxyribonucleotides de novo biosynthesis II
PAJ_1905 PWY-7226 guanosine deoxyribonucleotides de novo biosynthesis I
PAJ_1905 PWY-7227 adenosine deoxyribonucleotides de novo biosynthesis
PAJ_1931 PWY-5482 pyruvate fermentation to acetate II
PAJ_1931 PWY-5485 pyruvate fermentation to acetate IV
PAJ_1931 PWY-5497 purine nucleobases degradation II (anaerobic)
PAJ_1932 PWY-1281 sulfoacetaldehyde degradation I
PAJ_1932 PWY-5482 pyruvate fermentation to acetate II
PAJ_1932 PWY-5485 pyruvate fermentation to acetate IV
PAJ_1932 PWY-5497 purine nucleobases degradation II (anaerobic)
PAJ_1932 PWY-6637 sulfolactate degradation II
PAJ_1945 PWY-4261 glycerol degradation I
PAJ_1953 PWY-6121 5-aminoimidazole ribonucleotide biosynthesis I
PAJ_1953 PWY-6122 5-aminoimidazole ribonucleotide biosynthesis II
PAJ_1953 PWY-6277 superpathway of 5-aminoimidazole ribonucleotide biosynthesis
PAJ_1953 PWY-7282 4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
PAJ_1956 PWY-2161 folate polyglutamylation
PAJ_1957 PWY-4381 fatty acid biosynthesis initiation I
PAJ_1957 PWY-5743 3-hydroxypropanoate cycle
PAJ_1957 PWY-5744 glyoxylate assimilation
PAJ_1957 PWY-5789 3-hydroxypropanoate/4-hydroxybutanate cycle
PAJ_1957 PWY-6679 jadomycin biosynthesis
PAJ_1957 PWY-7388 octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
PAJ_1960 PWY-2941 L-lysine biosynthesis II
PAJ_1960 PWY-2942 L-lysine biosynthesis III
PAJ_1960 PWY-5097 L-lysine biosynthesis VI
PAJ_1960 PWY-5154 L-arginine biosynthesis III (via N-acetyl-L-citrulline)
PAJ_1960 PWY-6559 spermidine biosynthesis II
PAJ_1960 PWY-6562 norspermidine biosynthesis
PAJ_1960 PWY-7153 grixazone biosynthesis
PAJ_1960 PWY-7400 L-arginine biosynthesis IV (archaebacteria)
PAJ_1976 PWY-6163 chorismate biosynthesis from 3-dehydroquinate
PAJ_1982 PWY-1361 benzoyl-CoA degradation I (aerobic)
PAJ_1982 PWY-5109 2-methylbutanoate biosynthesis
PAJ_1982 PWY-5136 fatty acid β-oxidation II (peroxisome)
PAJ_1982 PWY-5138 unsaturated, even numbered fatty acid β-oxidation
PAJ_1982 PWY-5177 glutaryl-CoA degradation
PAJ_1982 PWY-5789 3-hydroxypropanoate/4-hydroxybutanate cycle
PAJ_1982 PWY-6435 4-hydroxybenzoate biosynthesis V
PAJ_1982 PWY-6583 pyruvate fermentation to butanol I
PAJ_1982 PWY-6863 pyruvate fermentation to hexanol
PAJ_1982 PWY-6883 pyruvate fermentation to butanol II
PAJ_1982 PWY-6944 androstenedione degradation
PAJ_1982 PWY-6945 cholesterol degradation to androstenedione I (cholesterol oxidase)
PAJ_1982 PWY-6946 cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
PAJ_1982 PWY-7007 methyl ketone biosynthesis
PAJ_1982 PWY-7046 4-coumarate degradation (anaerobic)
PAJ_1982 PWY-7094 fatty acid salvage
PAJ_1982 PWY-7216 (R)- and (S)-3-hydroxybutanoate biosynthesis
PAJ_1982 PWY-735 jasmonic acid biosynthesis
PAJ_1982 PWY-7401 crotonate fermentation (to acetate and cyclohexane carboxylate)
PAJ_1984 PWY-5136 fatty acid β-oxidation II (peroxisome)
PAJ_1984 PWY-6435 4-hydroxybenzoate biosynthesis V
PAJ_1984 PWY-6863 pyruvate fermentation to hexanol
PAJ_1984 PWY-6945 cholesterol degradation to androstenedione I (cholesterol oxidase)
PAJ_1984 PWY-6946 cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
PAJ_1984 PWY-6948 sitosterol degradation to androstenedione
PAJ_1984 PWY-7094 fatty acid salvage
PAJ_1984 PWY-7288 fatty acid β-oxidation (peroxisome, yeast)
PAJ_1984 PWY-7337 10-cis-heptadecenoyl-CoA degradation (yeast)
PAJ_1984 PWY-7338 10-trans-heptadecenoyl-CoA degradation (reductase-dependent, yeast)
PAJ_1984 PWY-7339 10-trans-heptadecenoyl-CoA degradation (MFE-dependent, yeast)
PAJ_1984 PWY-7340 9-cis, 11-trans-octadecadienoyl-CoA degradation (isomerase-dependent, yeast)
PAJ_1984 PWY-735 jasmonic acid biosynthesis
PAJ_2028 PWY-2723 trehalose degradation V
PAJ_2028 PWY-5514 UDP-N-acetyl-D-galactosamine biosynthesis II
PAJ_2028 PWY-5661 GDP-glucose biosynthesis
PAJ_2028 PWY-7238 sucrose biosynthesis II
PAJ_2028 PWY-7385 1,3-propanediol biosynthesis (engineered)
PAJ_2039 PWY-5188 tetrapyrrole biosynthesis I (from glutamate)
PAJ_2047 PWY-6936 seleno-amino acid biosynthesis
PAJ_2053 PWY-6936 seleno-amino acid biosynthesis
PAJ_2063 PWY-5531 chlorophyllide a biosynthesis II (anaerobic)
PAJ_2063 PWY-7159 chlorophyllide a biosynthesis III (aerobic, light independent)
PAJ_2064 PWY-1281 sulfoacetaldehyde degradation I
PAJ_2064 PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type
PAJ_2064 PWY-5482 pyruvate fermentation to acetate II
PAJ_2064 PWY-5485 pyruvate fermentation to acetate IV
PAJ_2064 PWY-5497 purine nucleobases degradation II (anaerobic)
PAJ_2064 PWY-6637 sulfolactate degradation II
PAJ_2064 PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type
PAJ_2065 PWY-1861 formaldehyde assimilation II (RuMP Cycle)
PAJ_2065 PWY-5723 Rubisco shunt
PAJ_2066 PWY-1861 formaldehyde assimilation II (RuMP Cycle)
PAJ_2066 PWY-5723 Rubisco shunt
PAJ_2066 PWY-6891 thiazole biosynthesis II (Bacillus)
PAJ_2066 PWY-6892 thiazole biosynthesis I (E. coli)
PAJ_2066 PWY-6901 superpathway of glucose and xylose degradation
PAJ_2066 PWY-7560 methylerythritol phosphate pathway II
PAJ_2078 PWY-1861 formaldehyde assimilation II (RuMP Cycle)
PAJ_2078 PWY-5723 Rubisco shunt
PAJ_2092 PWY-6123 inosine-5'-phosphate biosynthesis I
PAJ_2092 PWY-6124 inosine-5'-phosphate biosynthesis II
PAJ_2092 PWY-7234 inosine-5'-phosphate biosynthesis III
PAJ_2095 PWY-2941 L-lysine biosynthesis II
PAJ_2095 PWY-2942 L-lysine biosynthesis III
PAJ_2095 PWY-5097 L-lysine biosynthesis VI
PAJ_2110 PWY-4202 arsenate detoxification I (glutaredoxin)
PAJ_2110 PWY-4621 arsenate detoxification II (glutaredoxin)
PAJ_2113 PWY-7183 pyrimidine nucleobases salvage I
PAJ_2114 PWY-6121 5-aminoimidazole ribonucleotide biosynthesis I
PAJ_2114 PWY-6122 5-aminoimidazole ribonucleotide biosynthesis II
PAJ_2114 PWY-6277 superpathway of 5-aminoimidazole ribonucleotide biosynthesis
PAJ_2115 PWY-6121 5-aminoimidazole ribonucleotide biosynthesis I
PAJ_2115 PWY-6613 tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
PAJ_2135 PWY-7221 guanosine ribonucleotides de novo biosynthesis
PAJ_2137 PWY-5695 urate biosynthesis/inosine 5'-phosphate degradation
PAJ_2137 PWY-6596 adenosine nucleotides degradation I
PAJ_2137 PWY-7221 guanosine ribonucleotides de novo biosynthesis
PAJ_2145 PWY-7560 methylerythritol phosphate pathway II
PAJ_2149 PWY-6545 pyrimidine deoxyribonucleotides de novo biosynthesis III
PAJ_2149 PWY-7176 UTP and CTP de novo biosynthesis
PAJ_2149 PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I
PAJ_2149 PWY-7187 pyrimidine deoxyribonucleotides de novo biosynthesis II
PAJ_2149 PWY-7197 pyrimidine deoxyribonucleotide phosphorylation
PAJ_2149 PWY-7198 pyrimidine deoxyribonucleotides de novo biosynthesis IV
PAJ_2149 PWY-7205 CMP phosphorylation
PAJ_2149 PWY-7210 pyrimidine deoxyribonucleotides biosynthesis from CTP
PAJ_2149 PWY-7220 adenosine deoxyribonucleotides de novo biosynthesis II
PAJ_2149 PWY-7221 guanosine ribonucleotides de novo biosynthesis
PAJ_2149 PWY-7222 guanosine deoxyribonucleotides de novo biosynthesis II
PAJ_2149 PWY-7224 purine deoxyribonucleosides salvage
PAJ_2149 PWY-7226 guanosine deoxyribonucleotides de novo biosynthesis I
PAJ_2149 PWY-7227 adenosine deoxyribonucleotides de novo biosynthesis
PAJ_2154 PWY-5988 wound-induced proteolysis I
PAJ_2154 PWY-6018 seed germination protein turnover
PAJ_2155 PWY-6823 molybdenum cofactor biosynthesis
PAJ_2155 PWY-6891 thiazole biosynthesis II (Bacillus)
PAJ_2155 PWY-6892 thiazole biosynthesis I (E. coli)
PAJ_2155 PWY-7250 [2Fe-2S] iron-sulfur cluster biosynthesis
PAJ_2159 PWY-2301 myo-inositol biosynthesis
PAJ_2159 PWY-4702 phytate degradation I
PAJ_2159 PWY-6363 D-myo-inositol (1,4,5)-trisphosphate degradation
PAJ_2166 PWY-1622 formaldehyde assimilation I (serine pathway)
PAJ_2166 PWY-181 photorespiration
PAJ_2166 PWY-2161 folate polyglutamylation
PAJ_2166 PWY-2201 folate transformations I
PAJ_2166 PWY-3661 glycine betaine degradation I
PAJ_2166 PWY-3661-1 glycine betaine degradation II (mammalian)
PAJ_2166 PWY-3841 folate transformations II
PAJ_2166 PWY-5497 purine nucleobases degradation II (anaerobic)
PAJ_2172 PWY-6121 5-aminoimidazole ribonucleotide biosynthesis I
PAJ_2172 PWY-6122 5-aminoimidazole ribonucleotide biosynthesis II
PAJ_2172 PWY-6277 superpathway of 5-aminoimidazole ribonucleotide biosynthesis
PAJ_2176 PWY-5269 cardiolipin biosynthesis II
PAJ_2176 PWY-5668 cardiolipin biosynthesis I
PAJ_2179 PWY-6012 acyl carrier protein metabolism I
PAJ_2179 PWY-6012-1 acyl carrier protein metabolism II (mammalian)
PAJ_2191 PWY-5316 nicotine biosynthesis
PAJ_2191 PWY-7342 superpathway of nicotine biosynthesis
PAJ_2197 PWY-5083 NAD/NADH phosphorylation and dephosphorylation
PAJ_2197 PWY-7268 NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
PAJ_2197 PWY-7269 NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
PAJ_2241 PWY-1801 formaldehyde oxidation II (glutathione-dependent)
PAJ_2265 PWY-6545 pyrimidine deoxyribonucleotides de novo biosynthesis III
PAJ_2265 PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I
PAJ_2265 PWY-7198 pyrimidine deoxyribonucleotides de novo biosynthesis IV
PAJ_2265 PWY-7210 pyrimidine deoxyribonucleotides biosynthesis from CTP
PAJ_2265 PWY-7220 adenosine deoxyribonucleotides de novo biosynthesis II
PAJ_2265 PWY-7222 guanosine deoxyribonucleotides de novo biosynthesis II
PAJ_2265 PWY-7226 guanosine deoxyribonucleotides de novo biosynthesis I
PAJ_2265 PWY-7227 adenosine deoxyribonucleotides de novo biosynthesis
PAJ_2266 PWY-6545 pyrimidine deoxyribonucleotides de novo biosynthesis III
PAJ_2266 PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I
PAJ_2266 PWY-7198 pyrimidine deoxyribonucleotides de novo biosynthesis IV
PAJ_2266 PWY-7210 pyrimidine deoxyribonucleotides biosynthesis from CTP
PAJ_2266 PWY-7220 adenosine deoxyribonucleotides de novo biosynthesis II
PAJ_2266 PWY-7222 guanosine deoxyribonucleotides de novo biosynthesis II
PAJ_2266 PWY-7226 guanosine deoxyribonucleotides de novo biosynthesis I
PAJ_2266 PWY-7227 adenosine deoxyribonucleotides de novo biosynthesis
PAJ_2280 PWY-5392 reductive TCA cycle II
PAJ_2280 PWY-5537 pyruvate fermentation to acetate V
PAJ_2280 PWY-5538 pyruvate fermentation to acetate VI
PAJ_2280 PWY-5690 TCA cycle II (plants and fungi)
PAJ_2280 PWY-5913 TCA cycle VI (obligate autotrophs)
PAJ_2280 PWY-6728 methylaspartate cycle
PAJ_2280 PWY-6969 TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
PAJ_2280 PWY-7384 anaerobic energy metabolism (invertebrates, mitochondrial)
PAJ_2281 PWY-5269 cardiolipin biosynthesis II
PAJ_2281 PWY-5668 cardiolipin biosynthesis I
PAJ_2291 PWY-3461 L-tyrosine biosynthesis II
PAJ_2291 PWY-3462 L-phenylalanine biosynthesis II
PAJ_2291 PWY-6120 L-tyrosine biosynthesis III
PAJ_2291 PWY-6627 salinosporamide A biosynthesis
PAJ_2291 PWY-7432 L-phenylalanine biosynthesis III (cytosolic, plants)
PAJ_2292 PWY-3461 L-tyrosine biosynthesis II
PAJ_2292 PWY-3462 L-phenylalanine biosynthesis II
PAJ_2292 PWY-6120 L-tyrosine biosynthesis III
PAJ_2292 PWY-6627 salinosporamide A biosynthesis
PAJ_2292 PWY-7303 3-dimethylallyl-4-hydroxybenzoate biosynthesis
PAJ_2293 PWY-1269 CMP-3-deoxy-D-manno-octulosonate biosynthesis I
PAJ_2293 PWY-5111 CMP-3-deoxy-D-manno-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
PAJ_2293 PWY-6164 3-dehydroquinate biosynthesis I
PAJ_2296 PWY-6829 tRNA methylation (yeast)
PAJ_2296 PWY-7285 methylwyosine biosynthesis
PAJ_2296 PWY-7286 7-(3-amino-3-carboxypropyl)-wyosine biosynthesis
PAJ_2302 PWY-6151 S-adenosyl-L-methionine cycle I
PAJ_2302 PWY-6153 autoinducer AI-2 biosynthesis I
PAJ_2302 PWY-6154 autoinducer AI-2 biosynthesis II (Vibrio)
PAJ_2303 PWY-6840 homoglutathione biosynthesis
PAJ_2303 PWY-7255 ergothioneine biosynthesis I (bacteria)
PAJ_2320 PWY-5381 pyridine nucleotide cycling (plants)
PAJ_2320 PWY-5695 urate biosynthesis/inosine 5'-phosphate degradation
PAJ_2320 PWY-6596 adenosine nucleotides degradation I
PAJ_2320 PWY-6606 guanosine nucleotides degradation II
PAJ_2320 PWY-6607 guanosine nucleotides degradation I
PAJ_2320 PWY-6608 guanosine nucleotides degradation III
PAJ_2320 PWY-7185 UTP and CTP dephosphorylation I
PAJ_2322 PWY-7560 methylerythritol phosphate pathway II
PAJ_2323 PWY-7560 methylerythritol phosphate pathway II
PAJ_2326 PWY-5340 sulfate activation for sulfonation
PAJ_2327 PWY-5278 sulfite oxidation III
PAJ_2327 PWY-5340 sulfate activation for sulfonation
PAJ_2327 PWY-6683 sulfate reduction III (assimilatory)
PAJ_2327 PWY-6932 selenate reduction
PAJ_2328 PWY-5278 sulfite oxidation III
PAJ_2328 PWY-5340 sulfate activation for sulfonation
PAJ_2328 PWY-6683 sulfate reduction III (assimilatory)
PAJ_2328 PWY-6932 selenate reduction
PAJ_2329 PWY-5194 siroheme biosynthesis
PAJ_2329 PWY-7377 cob(II)yrinate a,c-diamide biosynthesis I (early cobalt insertion)
PAJ_2338 PWY-7383 anaerobic energy metabolism (invertebrates, cytosol)
PAJ_2340 PWY-6683 sulfate reduction III (assimilatory)
PAJ_2341 PWY-6683 sulfate reduction III (assimilatory)
PAJ_2342 PWY-7153 grixazone biosynthesis
PAJ_2345 PWY-6703 preQ0 biosynthesis
PAJ_2349 PWY-1042 glycolysis IV (plant cytosol)
PAJ_2349 PWY-1622 formaldehyde assimilation I (serine pathway)
PAJ_2349 PWY-2221 Entner-Doudoroff pathway III (semi-phosphorylative)
PAJ_2349 PWY-5484 glycolysis II (from fructose 6-phosphate)
PAJ_2349 PWY-5723 Rubisco shunt
PAJ_2349 PWY-6142 gluconeogenesis II (Methanobacterium thermoautotrophicum)
PAJ_2349 PWY-6886 1-butanol autotrophic biosynthesis
PAJ_2349 PWY-6901 superpathway of glucose and xylose degradation
PAJ_2349 PWY-7003 glycerol degradation to butanol
PAJ_2349 PWY-7124 ethylene biosynthesis V (engineered)
PAJ_2349 PWY-7218 photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
PAJ_2350 PWY-7176 UTP and CTP de novo biosynthesis
PAJ_2350 PWY-7177 UTP and CTP dephosphorylation II
PAJ_2350 PWY-7185 UTP and CTP dephosphorylation I
PAJ_2358 PWY-6499 D-glucarate degradation II
PAJ_2361 PWY-6497 D-galactarate degradation II
PAJ_2367 PWY-6700 queuosine biosynthesis
PAJ_2374 PWY-6823 molybdenum cofactor biosynthesis
PAJ_2374 PWY-6891 thiazole biosynthesis II (Bacillus)
PAJ_2374 PWY-6892 thiazole biosynthesis I (E. coli)
PAJ_2374 PWY-7250 [2Fe-2S] iron-sulfur cluster biosynthesis
PAJ_2380 PWY-5154 L-arginine biosynthesis III (via N-acetyl-L-citrulline)
PAJ_2389 PWY-3841 folate transformations II
PAJ_2389 PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I
PAJ_2389 PWY-7187 pyrimidine deoxyribonucleotides de novo biosynthesis II
PAJ_2389 PWY-7198 pyrimidine deoxyribonucleotides de novo biosynthesis IV
PAJ_2389 PWY-7199 pyrimidine deoxyribonucleosides salvage
PAJ_2389 PWY-7210 pyrimidine deoxyribonucleotides biosynthesis from CTP
PAJ_2397 PWY-2941 L-lysine biosynthesis II
PAJ_2397 PWY-2942 L-lysine biosynthesis III
PAJ_2397 PWY-5097 L-lysine biosynthesis VI
PAJ_2425 PWY-1861 formaldehyde assimilation II (RuMP Cycle)
PAJ_2425 PWY-5723 Rubisco shunt
PAJ_2430 PWY-1042 glycolysis IV (plant cytosol)
PAJ_2430 PWY-1861 formaldehyde assimilation II (RuMP Cycle)
PAJ_2430 PWY-5484 glycolysis II (from fructose 6-phosphate)
PAJ_2430 PWY-6142 gluconeogenesis II (Methanobacterium thermoautotrophicum)
PAJ_2430 PWY-7385 1,3-propanediol biosynthesis (engineered)
PAJ_2431 PWY-1042 glycolysis IV (plant cytosol)
PAJ_2431 PWY-5484 glycolysis II (from fructose 6-phosphate)
PAJ_2431 PWY-6886 1-butanol autotrophic biosynthesis
PAJ_2431 PWY-6901 superpathway of glucose and xylose degradation
PAJ_2431 PWY-7003 glycerol degradation to butanol
PAJ_2433 PWY-1861 formaldehyde assimilation II (RuMP Cycle)
PAJ_2433 PWY-5723 Rubisco shunt
PAJ_2433 PWY-6891 thiazole biosynthesis II (Bacillus)
PAJ_2433 PWY-6892 thiazole biosynthesis I (E. coli)
PAJ_2433 PWY-6901 superpathway of glucose and xylose degradation
PAJ_2433 PWY-7560 methylerythritol phosphate pathway II
PAJ_2435 PWY-40 putrescine biosynthesis I
PAJ_2435 PWY-6305 putrescine biosynthesis IV
PAJ_2436 PWY-40 putrescine biosynthesis I
PAJ_2436 PWY-43 putrescine biosynthesis II
PAJ_2436 PWY-6305 putrescine biosynthesis IV
PAJ_2436 PWY-6834 spermidine biosynthesis III
PAJ_2437 PWY-5041 S-adenosyl-L-methionine cycle II
PAJ_2437 PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis
PAJ_2448 PWY-7383 anaerobic energy metabolism (invertebrates, cytosol)
PAJ_2450 PWY-7206 pyrimidine deoxyribonucleotides dephosphorylation
PAJ_2464 PWY-46 putrescine biosynthesis III
PAJ_2464 PWY-6305 putrescine biosynthesis IV
PAJ_2517 PWY-2941 L-lysine biosynthesis II
PAJ_2517 PWY-2942 L-lysine biosynthesis III
PAJ_2517 PWY-5097 L-lysine biosynthesis VI
PAJ_2521 PWY-5757 fosfomycin biosynthesis
PAJ_2521 PWY-6322 phosphinothricin tripeptide biosynthesis
PAJ_2521 PWY-6682 dehydrophos biosynthesis
PAJ_2521 PWY-6839 2-aminoethylphosphonate biosynthesis
PAJ_2521 PWY-7510 rhizocticin A and B biosynthesis
PAJ_2522 PWY-5757 fosfomycin biosynthesis
PAJ_2522 PWY-6322 phosphinothricin tripeptide biosynthesis
PAJ_2522 PWY-6682 dehydrophos biosynthesis
PAJ_2522 PWY-6839 2-aminoethylphosphonate biosynthesis
PAJ_2522 PWY-7419 FR-900098 and FR-33289 antibiotics biosynthesis
PAJ_2522 PWY-7510 rhizocticin A and B biosynthesis
PAJ_2525 PWY-1622 formaldehyde assimilation I (serine pathway)
PAJ_2525 PWY-5484 glycolysis II (from fructose 6-phosphate)
PAJ_2526 PWY-1042 glycolysis IV (plant cytosol)
PAJ_2526 PWY-1622 formaldehyde assimilation I (serine pathway)
PAJ_2526 PWY-2221 Entner-Doudoroff pathway III (semi-phosphorylative)
PAJ_2526 PWY-5484 glycolysis II (from fructose 6-phosphate)
PAJ_2526 PWY-5723 Rubisco shunt
PAJ_2526 PWY-6142 gluconeogenesis II (Methanobacterium thermoautotrophicum)
PAJ_2526 PWY-6886 1-butanol autotrophic biosynthesis
PAJ_2526 PWY-6901 superpathway of glucose and xylose degradation
PAJ_2526 PWY-7003 glycerol degradation to butanol
PAJ_2526 PWY-7124 ethylene biosynthesis V (engineered)
PAJ_2526 PWY-7218 photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
PAJ_2545 PWY-4202 arsenate detoxification I (glutaredoxin)
PAJ_2545 PWY-5695 urate biosynthesis/inosine 5'-phosphate degradation
PAJ_2545 PWY-6608 guanosine nucleotides degradation III
PAJ_2545 PWY-6609 adenine and adenosine salvage III
PAJ_2545 PWY-6611 adenine and adenosine salvage V
PAJ_2545 PWY-6620 guanine and guanosine salvage
PAJ_2545 PWY-6627 salinosporamide A biosynthesis
PAJ_2545 PWY-6644 fluoroacetate and fluorothreonine biosynthesis
PAJ_2545 PWY-7179 purine deoxyribonucleosides degradation I
PAJ_2545 PWY-7179-1 purine deoxyribonucleosides degradation
PAJ_2546 PWY-7180 2'-deoxy-α-D-ribose 1-phosphate degradation
PAJ_2547 PWY-7181 pyrimidine deoxyribonucleosides degradation
PAJ_2548 PWY-7180 2'-deoxy-α-D-ribose 1-phosphate degradation
PAJ_2583 PWY-7310 D-glucosaminate degradation
PAJ_2591 PWY-6185 4-methylcatechol degradation (ortho cleavage)
PAJ_2592 PWY-6123 inosine-5'-phosphate biosynthesis I
PAJ_2592 PWY-6124 inosine-5'-phosphate biosynthesis II
PAJ_2592 PWY-7219 adenosine ribonucleotides de novo biosynthesis
PAJ_2592 PWY-7234 inosine-5'-phosphate biosynthesis III
PAJ_2593 PWY-1361 benzoyl-CoA degradation I (aerobic)
PAJ_2593 PWY-2361 3-oxoadipate degradation
PAJ_2593 PWY-6185 4-methylcatechol degradation (ortho cleavage)
PAJ_2597 PWY-6936 seleno-amino acid biosynthesis
PAJ_2603 PWY-5667 CDP-diacylglycerol biosynthesis I
PAJ_2603 PWY-5981 CDP-diacylglycerol biosynthesis III
PAJ_2603 PWY-7411 superpathway of phosphatidate biosynthesis (yeast)
PAJ_2603 PWY-7417 phospholipid remodeling (phosphatidate, yeast)
PAJ_2605 PWY-7310 D-glucosaminate degradation
PAJ_2607 PWY-7310 D-glucosaminate degradation
PAJ_2608 PWY-7310 D-glucosaminate degradation
PAJ_2622 PWY-6167 flavin biosynthesis II (archaea)
PAJ_2622 PWY-6168 flavin biosynthesis III (fungi)
PAJ_2630 PWY-6147 6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
PAJ_2630 PWY-6148 tetrahydromethanopterin biosynthesis
PAJ_2630 PWY-6797 6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
PAJ_2630 PWY-7539 6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
PAJ_2662 PWY-7310 D-glucosaminate degradation
PAJ_2664 PWY-7310 D-glucosaminate degradation
PAJ_2675 PWY-6386 UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
PAJ_2675 PWY-6387 UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing)
PAJ_2678 PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type
PAJ_2678 PWY-6142 gluconeogenesis II (Methanobacterium thermoautotrophicum)
PAJ_2678 PWY-7115 C4 photosynthetic carbon assimilation cycle, NAD-ME type
PAJ_2678 PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type
PAJ_2689 PWY-7247 β-D-glucuronide and D-glucuronate degradation
PAJ_2689 PWY-7248 pectin degradation III
PAJ_2702 PWY-4061 glutathione-mediated detoxification I
PAJ_2702 PWY-6842 glutathione-mediated detoxification II
PAJ_2702 PWY-7112 4-hydroxy-2-nonenal detoxification
PAJ_2702 PWY-7533 gliotoxin biosynthesis
PAJ_2713 PWY-7310 D-glucosaminate degradation
PAJ_2714 PWY-2221 Entner-Doudoroff pathway III (semi-phosphorylative)
PAJ_2714 PWY-6507 4-deoxy-L-threo-hex-4-enopyranuronate degradation
PAJ_2714 PWY-7242 D-fructuronate degradation
PAJ_2714 PWY-7310 D-glucosaminate degradation
PAJ_2715 PWY-7310 D-glucosaminate degradation
PAJ_2724 PWY-7446 sulfoglycolysis
PAJ_2725 PWY-7446 sulfoglycolysis
PAJ_2726 PWY-7446 sulfoglycolysis
PAJ_2727 PWY-7446 sulfoglycolysis
PAJ_2733 PWY-5484 glycolysis II (from fructose 6-phosphate)
PAJ_2759 PWY-7219 adenosine ribonucleotides de novo biosynthesis
PAJ_2765 PWY-2781 cis-zeatin biosynthesis
PAJ_2769 PWY-6938 NADH repair
PAJ_2773 PWY-5669 phosphatidylethanolamine biosynthesis I
PAJ_2775 PWY-1622 formaldehyde assimilation I (serine pathway)
PAJ_2775 PWY-5392 reductive TCA cycle II
PAJ_2775 PWY-561 superpathway of glyoxylate cycle and fatty acid degradation
PAJ_2775 PWY-5690 TCA cycle II (plants and fungi)
PAJ_2775 PWY-5913 TCA cycle VI (obligate autotrophs)
PAJ_2775 PWY-6728 methylaspartate cycle
PAJ_2775 PWY-6969 TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
PAJ_2775 PWY-7115 C4 photosynthetic carbon assimilation cycle, NAD-ME type
PAJ_2775 PWY-7383 anaerobic energy metabolism (invertebrates, cytosol)
PAJ_2795 PWY-6163 chorismate biosynthesis from 3-dehydroquinate
PAJ_2795 PWY-6416 quinate degradation II
PAJ_2795 PWY-6707 gallate biosynthesis
PAJ_2808 PWY-6163 chorismate biosynthesis from 3-dehydroquinate
PAJ_2866 PWY-6785 hydrogen production VIII
PAJ_2876 PWY-5723 Rubisco shunt
PAJ_2881 PWY-5958 acridone alkaloid biosynthesis
PAJ_2881 PWY-6660 2-heptyl-3-hydroxy-4(1H)-quinolone biosynthesis
PAJ_2881 PWY-6661 4-hydroxy-2(1H)-quinolone biosynthesis
PAJ_2888 PWY-181 photorespiration
PAJ_2889 PWY-1861 formaldehyde assimilation II (RuMP Cycle)
PAJ_2889 PWY-5723 Rubisco shunt
PAJ_2892 PWY-6164 3-dehydroquinate biosynthesis I
PAJ_2893 PWY-6163 chorismate biosynthesis from 3-dehydroquinate
PAJ_2904 PWY-561 superpathway of glyoxylate cycle and fatty acid degradation
PAJ_2904 PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type
PAJ_2910 PWY-5384 sucrose degradation IV (sucrose phosphorylase)
PAJ_2912 PWY-6519 8-amino-7-oxononanoate biosynthesis I
PAJ_2915 PWY-5941 glycogen degradation II (eukaryotic)
PAJ_2915 PWY-6724 starch degradation II
PAJ_2915 PWY-6737 starch degradation V
PAJ_2915 PWY-7238 sucrose biosynthesis II
PAJ_2916 PWY-5941 glycogen degradation II (eukaryotic)
PAJ_2916 PWY-622 starch biosynthesis
PAJ_2916 PWY-6731 starch degradation III
PAJ_2916 PWY-6737 starch degradation V
PAJ_2916 PWY-7238 sucrose biosynthesis II
PAJ_2919 PWY-5350 thiosulfate disproportionation III (rhodanese)
PAJ_2920 PWY-4261 glycerol degradation I
PAJ_2920 PWY-6118 glycerol-3-phosphate shuttle
PAJ_2920 PWY-6952 glycerophosphodiester degradation
PAJ_2921 PWY-5941 glycogen degradation II (eukaryotic)
PAJ_2921 PWY-622 starch biosynthesis
PAJ_2921 PWY-6731 starch degradation III
PAJ_2921 PWY-6737 starch degradation V
PAJ_2921 PWY-7238 sucrose biosynthesis II
PAJ_2922 PWY-622 starch biosynthesis
PAJ_2923 PWY-622 starch biosynthesis
PAJ_2925 PWY-5067 glycogen biosynthesis II (from UDP-D-Glucose)
PAJ_2925 PWY-622 starch biosynthesis
PAJ_2926 PWY-2941 L-lysine biosynthesis II
PAJ_2926 PWY-2942 L-lysine biosynthesis III
PAJ_2926 PWY-5097 L-lysine biosynthesis VI
PAJ_2926 PWY-5154 L-arginine biosynthesis III (via N-acetyl-L-citrulline)
PAJ_2926 PWY-6559 spermidine biosynthesis II
PAJ_2926 PWY-6562 norspermidine biosynthesis
PAJ_2926 PWY-7153 grixazone biosynthesis
PAJ_2926 PWY-7400 L-arginine biosynthesis IV (archaebacteria)
PAJ_2929 PWY-5530 sorbitol biosynthesis II
PAJ_2929 PWY-6163 chorismate biosynthesis from 3-dehydroquinate
PAJ_2933 PWY-4041 γ-glutamyl cycle
PAJ_2933 PWY-5826 hypoglycin biosynthesis
PAJ_2960 PWY-5940 streptomycin biosynthesis
PAJ_2960 PWY-7237 myo-, chiro- and scillo-inositol degradation
PAJ_2960 PWY-7241 myo-inositol degradation II
PAJ_2963 PWY-6507 4-deoxy-L-threo-hex-4-enopyranuronate degradation
PAJ_2964 PWY-5642 2,4-dinitrotoluene degradation
PAJ_2964 PWY-6373 acrylate degradation
PAJ_2968 PWY-7242 D-fructuronate degradation
PAJ_2971 PWY-5188 tetrapyrrole biosynthesis I (from glutamate)
PAJ_2971 PWY-5189 tetrapyrrole biosynthesis II (from glycine)
PAJ_2977 PWY-6454 vancomycin resistance I
PAJ_2977 PWY-6455 vancomycin resistance II
PAJ_2993 PWY-4081 glutathione redox reactions I
PAJ_3025 PWY-7254 TCA cycle VII (acetate-producers)
PAJ_3041 PWY-5101 L-isoleucine biosynthesis II
PAJ_3041 PWY-5103 L-isoleucine biosynthesis III
PAJ_3041 PWY-5104 L-isoleucine biosynthesis IV
PAJ_3041 PWY-7111 pyruvate fermentation to isobutanol (engineered)
PAJ_3044 PWY-5101 L-isoleucine biosynthesis II
PAJ_3044 PWY-5103 L-isoleucine biosynthesis III
PAJ_3044 PWY-5104 L-isoleucine biosynthesis IV
PAJ_3044 PWY-7111 pyruvate fermentation to isobutanol (engineered)
PAJ_3045 PWY-5057 L-valine degradation II
PAJ_3045 PWY-5076 L-leucine degradation III
PAJ_3045 PWY-5078 L-isoleucine degradation II
PAJ_3045 PWY-5101 L-isoleucine biosynthesis II
PAJ_3045 PWY-5103 L-isoleucine biosynthesis III
PAJ_3045 PWY-5104 L-isoleucine biosynthesis IV
PAJ_3045 PWY-5108 L-isoleucine biosynthesis V
PAJ_3047 PWY-5101 L-isoleucine biosynthesis II
PAJ_3047 PWY-5103 L-isoleucine biosynthesis III
PAJ_3047 PWY-5104 L-isoleucine biosynthesis IV
PAJ_3047 PWY-5938 (R)-acetoin biosynthesis I
PAJ_3047 PWY-5939 (R)-acetoin biosynthesis II
PAJ_3047 PWY-6389 (S)-acetoin biosynthesis
PAJ_3047 PWY-7111 pyruvate fermentation to isobutanol (engineered)
PAJ_3051 PWY-6386 UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
PAJ_3051 PWY-6387 UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing)
PAJ_3056 PWY-5083 NAD/NADH phosphorylation and dephosphorylation
PAJ_3058 PWY-4983 L-citrulline-nitric oxide cycle
PAJ_3058 PWY-4984 urea cycle
PAJ_3058 PWY-5 canavanine biosynthesis
PAJ_3058 PWY-5154 L-arginine biosynthesis III (via N-acetyl-L-citrulline)
PAJ_3058 PWY-7400 L-arginine biosynthesis IV (archaebacteria)
PAJ_3059 PWY-4983 L-citrulline-nitric oxide cycle
PAJ_3059 PWY-4984 urea cycle
PAJ_3059 PWY-5 canavanine biosynthesis
PAJ_3059 PWY-5154 L-arginine biosynthesis III (via N-acetyl-L-citrulline)
PAJ_3059 PWY-7400 L-arginine biosynthesis IV (archaebacteria)
PAJ_3060 PWY-5154 L-arginine biosynthesis III (via N-acetyl-L-citrulline)
PAJ_3060 PWY-7400 L-arginine biosynthesis IV (archaebacteria)
PAJ_3061 PWY-5154 L-arginine biosynthesis III (via N-acetyl-L-citrulline)
PAJ_3061 PWY-7400 L-arginine biosynthesis IV (archaebacteria)
PAJ_3062 PWY-5154 L-arginine biosynthesis III (via N-acetyl-L-citrulline)
PAJ_3063 PWY-1622 formaldehyde assimilation I (serine pathway)
PAJ_3063 PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type
PAJ_3063 PWY-5913 TCA cycle VI (obligate autotrophs)
PAJ_3063 PWY-6142 gluconeogenesis II (Methanobacterium thermoautotrophicum)
PAJ_3063 PWY-6146 Methanobacterium thermoautotrophicum biosynthetic metabolism
PAJ_3063 PWY-6549 L-glutamine biosynthesis III
PAJ_3063 PWY-7115 C4 photosynthetic carbon assimilation cycle, NAD-ME type
PAJ_3063 PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type
PAJ_3063 PWY-7124 ethylene biosynthesis V (engineered)
PAJ_3065 PWY-2201 folate transformations I
PAJ_3065 PWY-3841 folate transformations II
PAJ_3066 PWY-2941 L-lysine biosynthesis II
PAJ_3066 PWY-2942 L-lysine biosynthesis III
PAJ_3066 PWY-5097 L-lysine biosynthesis VI
PAJ_3066 PWY-6559 spermidine biosynthesis II
PAJ_3066 PWY-6562 norspermidine biosynthesis
PAJ_3066 PWY-7153 grixazone biosynthesis
PAJ_3078 PWY-4261 glycerol degradation I
PAJ_3079 PWY-5484 glycolysis II (from fructose 6-phosphate)
PAJ_3084 PWY-1042 glycolysis IV (plant cytosol)
PAJ_3084 PWY-5484 glycolysis II (from fructose 6-phosphate)
PAJ_3084 PWY-6142 gluconeogenesis II (Methanobacterium thermoautotrophicum)
PAJ_3084 PWY-7003 glycerol degradation to butanol
PAJ_3087 PWY-1042 glycolysis IV (plant cytosol)
PAJ_3087 PWY-1861 formaldehyde assimilation II (RuMP Cycle)
PAJ_3087 PWY-5484 glycolysis II (from fructose 6-phosphate)
PAJ_3087 PWY-7385 1,3-propanediol biosynthesis (engineered)
PAJ_3094 PWY-6936 seleno-amino acid biosynthesis
PAJ_3094 PWY-7274 D-cycloserine biosynthesis
PAJ_3095 PWY-5667 CDP-diacylglycerol biosynthesis I
PAJ_3095 PWY-5981 CDP-diacylglycerol biosynthesis III
PAJ_3102 PWY-7378 aminopropanol phosphate biosynthesis II
PAJ_3124 PWY-6545 pyrimidine deoxyribonucleotides de novo biosynthesis III
PAJ_3124 PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I
PAJ_3124 PWY-7187 pyrimidine deoxyribonucleotides de novo biosynthesis II
PAJ_3124 PWY-7206 pyrimidine deoxyribonucleotides dephosphorylation
PAJ_3126 PWY-5686 UMP biosynthesis
PAJ_3139 PWY-7221 guanosine ribonucleotides de novo biosynthesis
PAJ_3152 PWY-381 nitrate reduction II (assimilatory)
PAJ_3152 PWY-5675 nitrate reduction V (assimilatory)
PAJ_3152 PWY-6549 L-glutamine biosynthesis III
PAJ_3152 PWY-6963 ammonia assimilation cycle I
PAJ_3152 PWY-6964 ammonia assimilation cycle II
PAJ_3162 PWY-5964 guanylyl molybdenum cofactor biosynthesis
PAJ_3189 PWY-7219 adenosine ribonucleotides de novo biosynthesis
PAJ_3192 PWY-7219 adenosine ribonucleotides de novo biosynthesis
PAJ_3194 PWY-5514 UDP-N-acetyl-D-galactosamine biosynthesis II
PAJ_3195 PWY-6749 CMP-legionaminate biosynthesis I
PAJ_3202 PWY-4261 glycerol degradation I
PAJ_3224 PWY-7310 D-glucosaminate degradation
PAJ_3225 PWY-7310 D-glucosaminate degradation
PAJ_3257 PWY-6012 acyl carrier protein metabolism I
PAJ_3257 PWY-6012-1 acyl carrier protein metabolism II (mammalian)
PAJ_3269 PWY-6854 ethylene biosynthesis III (microbes)
PAJ_3274 PWY-7310 D-glucosaminate degradation
PAJ_3289 PWY-1001 cellulose biosynthesis
PAJ_3292 PWY-6788 cellulose degradation II (fungi)
PAJ_3306 PWY-7219 adenosine ribonucleotides de novo biosynthesis
PAJ_3307 PWY-5265 peptidoglycan biosynthesis II (staphylococci)
PAJ_3307 PWY-6470 peptidoglycan biosynthesis V (β-lactam resistance)
PAJ_3307 PWY-6471 peptidoglycan biosynthesis IV (Enterococcus faecium)
PAJ_3307 PWY-7290 Escherichia coli serotype O86 O-antigen biosynthesis
PAJ_3307 PWY-7530 β-D-galactosaminyl-(1→3)-N-acetyl-α-D-galactosamine biosynthesis
PAJ_3309 PWY-7335 UDP-N-acetyl-α-D-mannosaminouronate biosynthesis
PAJ_3311 PWY-3221 dTDP-L-rhamnose biosynthesis II
PAJ_3311 PWY-6808 dTDP-D-forosamine biosynthesis
PAJ_3311 PWY-6942 dTDP-D-desosamine biosynthesis
PAJ_3311 PWY-6953 dTDP-3-acetamido-3,6-dideoxy-α-D-galactose biosynthesis
PAJ_3311 PWY-6973 dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
PAJ_3311 PWY-6974 dTDP-L-olivose biosynthesis
PAJ_3311 PWY-6976 dTDP-L-mycarose biosynthesis
PAJ_3311 PWY-7104 dTDP-L-megosamine biosynthesis
PAJ_3311 PWY-7301 dTDP-β-L-noviose biosynthesis
PAJ_3311 PWY-7312 dTDP-D-β-fucofuranose biosynthesis
PAJ_3311 PWY-7315 dTDP-N-acetylthomosamine biosynthesis
PAJ_3311 PWY-7316 dTDP-N-acetylviosamine biosynthesis
PAJ_3311 PWY-7318 dTDP-3-acetamido-3,6-dideoxy-α-D-glucose biosynthesis
PAJ_3311 PWY-7413 dTDP-6-deoxy-α-D-allose biosynthesis
PAJ_3311 PWY-7414 dTDP-α-D-mycaminose biosynthesis
PAJ_3311 PWY-7440 dTDP-β-L-4-epi-vancosamine biosynthesis
PAJ_3312 PWY-3221 dTDP-L-rhamnose biosynthesis II
PAJ_3312 PWY-6808 dTDP-D-forosamine biosynthesis
PAJ_3312 PWY-6942 dTDP-D-desosamine biosynthesis
PAJ_3312 PWY-6953 dTDP-3-acetamido-3,6-dideoxy-α-D-galactose biosynthesis
PAJ_3312 PWY-6973 dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
PAJ_3312 PWY-6974 dTDP-L-olivose biosynthesis
PAJ_3312 PWY-6976 dTDP-L-mycarose biosynthesis
PAJ_3312 PWY-7104 dTDP-L-megosamine biosynthesis
PAJ_3312 PWY-7301 dTDP-β-L-noviose biosynthesis
PAJ_3312 PWY-7312 dTDP-D-β-fucofuranose biosynthesis
PAJ_3312 PWY-7315 dTDP-N-acetylthomosamine biosynthesis
PAJ_3312 PWY-7316 dTDP-N-acetylviosamine biosynthesis
PAJ_3312 PWY-7318 dTDP-3-acetamido-3,6-dideoxy-α-D-glucose biosynthesis
PAJ_3312 PWY-7413 dTDP-6-deoxy-α-D-allose biosynthesis
PAJ_3312 PWY-7414 dTDP-α-D-mycaminose biosynthesis
PAJ_3312 PWY-7440 dTDP-β-L-4-epi-vancosamine biosynthesis
PAJ_3313 PWY-7315 dTDP-N-acetylthomosamine biosynthesis
PAJ_3314 PWY-7315 dTDP-N-acetylthomosamine biosynthesis
PAJ_3321 PWY-5188 tetrapyrrole biosynthesis I (from glutamate)
PAJ_3321 PWY-5189 tetrapyrrole biosynthesis II (from glycine)
PAJ_3322 PWY-5188 tetrapyrrole biosynthesis I (from glutamate)
PAJ_3322 PWY-5189 tetrapyrrole biosynthesis II (from glycine)
PAJ_3325 PWY-2941 L-lysine biosynthesis II
PAJ_3325 PWY-5097 L-lysine biosynthesis VI
PAJ_3336 PWY-6803 phosphatidylcholine acyl editing
PAJ_3336 PWY-7409 phospholipid remodeling (phosphatidylethanolamine, yeast)
PAJ_3336 PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast)
PAJ_3336 PWY-7417 phospholipid remodeling (phosphatidate, yeast)
PAJ_3346 PWY-5041 S-adenosyl-L-methionine cycle II
PAJ_3346 PWY-6151 S-adenosyl-L-methionine cycle I
PAJ_3346 PWY-6936 seleno-amino acid biosynthesis
PAJ_3346 PWY-702 L-methionine biosynthesis II
PAJ_3348 PWY-4202 arsenate detoxification I (glutaredoxin)
PAJ_3348 PWY-5695 urate biosynthesis/inosine 5'-phosphate degradation
PAJ_3348 PWY-6608 guanosine nucleotides degradation III
PAJ_3348 PWY-6609 adenine and adenosine salvage III
PAJ_3348 PWY-6611 adenine and adenosine salvage V
PAJ_3348 PWY-6620 guanine and guanosine salvage
PAJ_3348 PWY-6627 salinosporamide A biosynthesis
PAJ_3348 PWY-6644 fluoroacetate and fluorothreonine biosynthesis
PAJ_3348 PWY-7179 purine deoxyribonucleosides degradation I
PAJ_3348 PWY-7179-1 purine deoxyribonucleosides degradation
PAJ_3350 PWY-5839 menaquinol-7 biosynthesis
PAJ_3350 PWY-5844 menaquinol-9 biosynthesis
PAJ_3350 PWY-5849 menaquinol-6 biosynthesis
PAJ_3350 PWY-5890 menaquinol-10 biosynthesis
PAJ_3350 PWY-5891 menaquinol-11 biosynthesis
PAJ_3350 PWY-5892 menaquinol-12 biosynthesis
PAJ_3350 PWY-5895 menaquinol-13 biosynthesis
PAJ_3360 PWY-5136 fatty acid β-oxidation II (peroxisome)
PAJ_3360 PWY-6435 4-hydroxybenzoate biosynthesis V
PAJ_3360 PWY-6863 pyruvate fermentation to hexanol
PAJ_3360 PWY-6945 cholesterol degradation to androstenedione I (cholesterol oxidase)
PAJ_3360 PWY-6946 cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
PAJ_3360 PWY-6948 sitosterol degradation to androstenedione
PAJ_3360 PWY-7094 fatty acid salvage
PAJ_3360 PWY-7288 fatty acid β-oxidation (peroxisome, yeast)
PAJ_3360 PWY-7337 10-cis-heptadecenoyl-CoA degradation (yeast)
PAJ_3360 PWY-7338 10-trans-heptadecenoyl-CoA degradation (reductase-dependent, yeast)
PAJ_3360 PWY-7339 10-trans-heptadecenoyl-CoA degradation (MFE-dependent, yeast)
PAJ_3360 PWY-7340 9-cis, 11-trans-octadecadienoyl-CoA degradation (isomerase-dependent, yeast)
PAJ_3360 PWY-735 jasmonic acid biosynthesis
PAJ_3361 PWY-1361 benzoyl-CoA degradation I (aerobic)
PAJ_3361 PWY-5109 2-methylbutanoate biosynthesis
PAJ_3361 PWY-5136 fatty acid β-oxidation II (peroxisome)
PAJ_3361 PWY-5137 fatty acid β-oxidation III (unsaturated, odd number)
PAJ_3361 PWY-5138 unsaturated, even numbered fatty acid β-oxidation
PAJ_3361 PWY-5177 glutaryl-CoA degradation
PAJ_3361 PWY-5789 3-hydroxypropanoate/4-hydroxybutanate cycle
PAJ_3361 PWY-6435 4-hydroxybenzoate biosynthesis V
PAJ_3361 PWY-6583 pyruvate fermentation to butanol I
PAJ_3361 PWY-6837 fatty acid beta-oxidation V (unsaturated, odd number, di-isomerase-dependent)
PAJ_3361 PWY-6863 pyruvate fermentation to hexanol
PAJ_3361 PWY-6883 pyruvate fermentation to butanol II
PAJ_3361 PWY-6944 androstenedione degradation
PAJ_3361 PWY-6945 cholesterol degradation to androstenedione I (cholesterol oxidase)
PAJ_3361 PWY-6946 cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
PAJ_3361 PWY-7007 methyl ketone biosynthesis
PAJ_3361 PWY-7046 4-coumarate degradation (anaerobic)
PAJ_3361 PWY-7094 fatty acid salvage
PAJ_3361 PWY-7216 (R)- and (S)-3-hydroxybutanoate biosynthesis
PAJ_3361 PWY-7291 oleate β-oxidation (isomerase-dependent, yeast)
PAJ_3361 PWY-735 jasmonic acid biosynthesis
PAJ_3361 PWY-7401 crotonate fermentation (to acetate and cyclohexane carboxylate)
PAJ_3366 PWY-6386 UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
PAJ_3366 PWY-6387 UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing)
PAJ_3367 PWY-6987 lipoate biosynthesis and incorporation III (Bacillus)
PAJ_3367 PWY-7381 lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
PAJ_3368 PWY-3961 phosphopantothenate biosynthesis II
PAJ_3379 PWY-6893 thiamin diphosphate biosynthesis II (Bacillus)
PAJ_3379 PWY-6894 thiamin diphosphate biosynthesis I (E. coli)
PAJ_3379 PWY-6897 thiamin salvage II
PAJ_3379 PWY-6907 thiamin diphosphate biosynthesis III (Staphylococcus)
PAJ_3379 PWY-6908 thiamin diphosphate biosynthesis IV (eukaryotes)
PAJ_3379 PWY-7353 4-methyl-5(β-hydroxyethyl)thiazole salvage (yeast)
PAJ_3379 PWY-7357 thiamin formation from pyrithiamine and oxythiamine (yeast)
PAJ_3380 PWY-6890 4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis
PAJ_3382 PWY-5381 pyridine nucleotide cycling (plants)
PAJ_3383 PWY-5531 chlorophyllide a biosynthesis II (anaerobic)
PAJ_3383 PWY-7159 chlorophyllide a biosynthesis III (aerobic, light independent)
PAJ_3388 PWY-6121 5-aminoimidazole ribonucleotide biosynthesis I
PAJ_3388 PWY-6122 5-aminoimidazole ribonucleotide biosynthesis II
PAJ_3388 PWY-6277 superpathway of 5-aminoimidazole ribonucleotide biosynthesis
PAJ_3389 PWY-6123 inosine-5'-phosphate biosynthesis I
PAJ_3389 PWY-6124 inosine-5'-phosphate biosynthesis II
PAJ_3389 PWY-7234 inosine-5'-phosphate biosynthesis III
PAJ_3393 PWY-6728 methylaspartate cycle
PAJ_3393 PWY-6969 TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
PAJ_3393 PWY-7118 chitin degradation to ethanol
PAJ_3393 PWY-7294 xylose degradation IV
PAJ_3393 PWY-7295 L-arabinose degradation IV
PAJ_3394 PWY-6969 TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
PAJ_3401 PWY-2201 folate transformations I
PAJ_3401 PWY-3841 folate transformations II
PAJ_3406 PWY-3801 sucrose degradation II (sucrose synthase)
PAJ_3406 PWY-5054 sorbitol biosynthesis I
PAJ_3406 PWY-5384 sucrose degradation IV (sucrose phosphorylase)
PAJ_3406 PWY-5514 UDP-N-acetyl-D-galactosamine biosynthesis II
PAJ_3406 PWY-5659 GDP-mannose biosynthesis
PAJ_3406 PWY-6142 gluconeogenesis II (Methanobacterium thermoautotrophicum)
PAJ_3406 PWY-621 sucrose degradation III (sucrose invertase)
PAJ_3406 PWY-622 starch biosynthesis
PAJ_3406 PWY-6531 mannitol cycle
PAJ_3406 PWY-6981 chitin biosynthesis
PAJ_3406 PWY-7238 sucrose biosynthesis II
PAJ_3406 PWY-7347 sucrose biosynthesis III
PAJ_3406 PWY-7385 1,3-propanediol biosynthesis (engineered)
PAJ_3407 PWY-2941 L-lysine biosynthesis II
PAJ_3407 PWY-2942 L-lysine biosynthesis III
PAJ_3407 PWY-5097 L-lysine biosynthesis VI
PAJ_3407 PWY-6559 spermidine biosynthesis II
PAJ_3407 PWY-6562 norspermidine biosynthesis
PAJ_3407 PWY-7153 grixazone biosynthesis
PAJ_3412 PWY-5755 4-hydroxybenzoate biosynthesis II (microbes)
PAJ_3412 PWY-5870 ubiquinol-8 biosynthesis (eukaryotic)
PAJ_3412 PWY-6148 tetrahydromethanopterin biosynthesis
PAJ_3414 PWY-5667 CDP-diacylglycerol biosynthesis I
PAJ_3414 PWY-7411 superpathway of phosphatidate biosynthesis (yeast)
PAJ_3415 PWY-7039 phosphatidate metabolism, as a signaling molecule
PAJ_3427 PWY-5913 TCA cycle VI (obligate autotrophs)
PAJ_3427 PWY-6318 L-phenylalanine degradation IV (mammalian, via side chain)
PAJ_3427 PWY-6638 sulfolactate degradation III
PAJ_3427 PWY-6642 (R)-cysteate degradation
PAJ_3427 PWY-6643 coenzyme M biosynthesis II
PAJ_3427 PWY-7115 C4 photosynthetic carbon assimilation cycle, NAD-ME type
PAJ_3427 PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type
PAJ_3427 PWY-7383 anaerobic energy metabolism (invertebrates, cytosol)
PAJ_3452 PWY-6672 cis-genanyl-CoA degradation
PAJ_3452 PWY-7118 chitin degradation to ethanol
PAJ_3455 PWY-7310 D-glucosaminate degradation
PAJ_3461 PWY-7165 L-ascorbate biosynthesis VI (engineered pathway)
PAJ_3490 PWY-6807 xyloglucan degradation II (exoglucanase)
PAJ_3493 PWY-7310 D-glucosaminate degradation
PAJ_3494 PWY-621 sucrose degradation III (sucrose invertase)
PAJ_3513 PWY-6961 L-ascorbate degradation II (bacterial, aerobic)
PAJ_3514 PWY-6961 L-ascorbate degradation II (bacterial, aerobic)
PAJ_3515 PWY-5686 UMP biosynthesis
PAJ_3517 PWY-4261 glycerol degradation I
PAJ_3530 PWY-6784 cellulose and hemicellulose degradation (cellulolosome)
PAJ_3565 PWY-6683 sulfate reduction III (assimilatory)
PAJ_3577 PWY-1269 CMP-3-deoxy-D-manno-octulosonate biosynthesis I
PAJ_3577 PWY-5111 CMP-3-deoxy-D-manno-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
PAJ_3586 PWY-6386 UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
PAJ_3586 PWY-6387 UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing)
PAJ_3594 PWY-5265 peptidoglycan biosynthesis II (staphylococci)
PAJ_3594 PWY-6471 peptidoglycan biosynthesis IV (Enterococcus faecium)
PAJ_3599 PWY-6614 tetrahydrofolate biosynthesis
PAJ_3600 PWY-6749 CMP-legionaminate biosynthesis I
PAJ_3622 PWY-7187 pyrimidine deoxyribonucleotides de novo biosynthesis II
PAJ_3622 PWY-7220 adenosine deoxyribonucleotides de novo biosynthesis II
PAJ_3622 PWY-7222 guanosine deoxyribonucleotides de novo biosynthesis II
PAJ_3623 PWY-6902 chitin degradation II
PAJ_3631 PWY-6622 heptadecane biosynthesis
PAJ_3631 PWY-7032 alkane biosynthesis I
PAJ_3636 PWY-5686 UMP biosynthesis
PAJ_3637 PWY-4981 L-proline biosynthesis II (from arginine)
PAJ_3637 PWY-4984 urea cycle
PAJ_3637 PWY-7400 L-arginine biosynthesis IV (archaebacteria)
PAJ_3644 PWY-5988 wound-induced proteolysis I
PAJ_3644 PWY-6018 seed germination protein turnover
PAJ_3704 PWY-5971 palmitate biosynthesis II (bacteria and plants)
PAJ_3704 PWY-5973 cis-vaccenate biosynthesis
PAJ_3704 PWY-5989 stearate biosynthesis II (bacteria and plants)
PAJ_3704 PWY-5994 palmitate biosynthesis I (animals and fungi)
PAJ_3704 PWY-6113 superpathway of mycolate biosynthesis
PAJ_3704 PWY-6282 palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
PAJ_3704 PWY-6519 8-amino-7-oxononanoate biosynthesis I
PAJ_3704 PWY-7388 octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
PAJ_3704 PWYG-321 mycolate biosynthesis
PAJ_3705 PWY-5367 petroselinate biosynthesis
PAJ_3705 PWY-5971 palmitate biosynthesis II (bacteria and plants)
PAJ_3705 PWY-5973 cis-vaccenate biosynthesis
PAJ_3705 PWY-5989 stearate biosynthesis II (bacteria and plants)
PAJ_3705 PWY-5994 palmitate biosynthesis I (animals and fungi)
PAJ_3705 PWY-6113 superpathway of mycolate biosynthesis
PAJ_3705 PWY-6282 palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
PAJ_3705 PWY-6519 8-amino-7-oxononanoate biosynthesis I
PAJ_3705 PWY-6951 PAJ_3705
PAJ_3705 PWY-7053 docosahexaenoate biosynthesis I (lower eukaryotes)
PAJ_3705 PWY-7388 octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
PAJ_3705 PWYG-321 mycolate biosynthesis
PAJ_3707 PWY-6012 acyl carrier protein metabolism I
PAJ_3707 PWY-6012-1 acyl carrier protein metabolism II (mammalian)
PAJ_3714 PWY-4261 glycerol degradation I
PAJ_3722 PWY-6507 4-deoxy-L-threo-hex-4-enopyranuronate degradation
PAJ_3723 PWY-6507 4-deoxy-L-threo-hex-4-enopyranuronate degradation
PAJ_3781 PWY-5169 cyanurate degradation
PAJ_3781 PWY-5703 urea degradation I