PAJ_0001	SSF51735	NAD(P)-binding Rossmann-fold domains
PAJ_0001	SSF53633	Carbamate kinase-like
PAJ_0001	SSF55021	ACT-like
PAJ_0001	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
PAJ_0002	SSF54211	Ribosomal protein S5 domain 2-like
PAJ_0002	SSF55060	GHMP Kinase, C-terminal domain
PAJ_0003	SSF53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes
PAJ_0005	SSF51569	Aldolase
PAJ_0006	SSF53218	Molybdenum cofactor biosynthesis proteins
PAJ_0007	SSF103473	MFS general substrate transporter
PAJ_0010	SSF100920	Heat shock protein 70kD (HSP70), peptide-binding domain
PAJ_0010	SSF100934	Heat shock protein 70kD (HSP70), C-terminal subdomain
PAJ_0010	SSF53067	Actin-like ATPase domain
PAJ_0011	SSF46565	Chaperone J-domain
PAJ_0011	SSF49493	HSP40/DnaJ peptide-binding domain
PAJ_0011	SSF57938	DnaJ/Hsp40 cysteine-rich domain
PAJ_0013	SSF46992	Ribosomal protein S20
PAJ_0014	SSF52374	Nucleotidylyl transferase
PAJ_0014	SSF82114	Riboflavin kinase-like
PAJ_0015	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
PAJ_0015	SSF50677	ValRS/IleRS/LeuRS editing domain
PAJ_0015	SSF52374	Nucleotidylyl transferase
PAJ_0017	SSF54534	FKBP-like
PAJ_0019	SSF51735	NAD(P)-binding Rossmann-fold domains
PAJ_0019	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
PAJ_0020	SSF52021	Carbamoyl phosphate synthetase, small subunit N-terminal domain
PAJ_0020	SSF52317	Class I glutamine amidotransferase-like
PAJ_0021	SSF48108	Carbamoyl phosphate synthetase, large subunit connection domain
PAJ_0021	SSF52335	Methylglyoxal synthase-like
PAJ_0021	SSF52440	PreATP-grasp domain
PAJ_0021	SSF56059	Glutathione synthetase ATP-binding domain-like
PAJ_0023	SSF51735	NAD(P)-binding Rossmann-fold domains
PAJ_0024	SSF46785	"Winged helix" DNA-binding domain
PAJ_0024	SSF53850	Periplasmic binding protein-like II
PAJ_0025	SSF56935	Porins
PAJ_0026	SSF53597	Dihydrofolate reductase-like
PAJ_0027	SSF56300	Metallo-dependent phosphatases
PAJ_0028	SSF110069	ApaG-like
PAJ_0029	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
PAJ_0030	SSF53659	Isocitrate/Isopropylmalate dehydrogenase-like
PAJ_0031	SSF109998	Triger factor/SurA peptide-binding domain-like
PAJ_0031	SSF54534	FKBP-like
PAJ_0033	SSF46565	Chaperone J-domain
PAJ_0034	SSF55120	Pseudouridine synthase
PAJ_0035	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_0037	SSF53098	Ribonuclease H-like
PAJ_0037	SSF56672	DNA/RNA polymerases
PAJ_0039	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_0040	SSF161098	MetI-like
PAJ_0041	SSF53850	Periplasmic binding protein-like II
PAJ_0042	SSF46785	"Winged helix" DNA-binding domain
PAJ_0042	SSF53850	Periplasmic binding protein-like II
PAJ_0043	SSF103473	MFS general substrate transporter
PAJ_0044	SSF103473	MFS general substrate transporter
PAJ_0045	SSF46785	"Winged helix" DNA-binding domain
PAJ_0045	SSF53850	Periplasmic binding protein-like II
PAJ_0046	SSF51569	Aldolase
PAJ_0047	SSF103473	MFS general substrate transporter
PAJ_0048	SSF51735	NAD(P)-binding Rossmann-fold domains
PAJ_0048	SSF53223	Aminoacid dehydrogenase-like, N-terminal domain
PAJ_0049	SSF51395	FMN-linked oxidoreductases
PAJ_0049	SSF51905	FAD/NAD(P)-binding domain
PAJ_0049	SSF51971	Nucleotide-binding domain
PAJ_0050	SSF52016	LeuD/IlvD-like
PAJ_0051	SSF53732	Aconitase iron-sulfur domain
PAJ_0052	SSF53659	Isocitrate/Isopropylmalate dehydrogenase-like
PAJ_0053	SSF110921	2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain
PAJ_0053	SSF51569	Aldolase
PAJ_0054	SSF52467	DHS-like NAD/FAD-binding domain
PAJ_0054	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
PAJ_0055	SSF55021	ACT-like
PAJ_0056	SSF53822	Periplasmic binding protein-like I
PAJ_0057	SSF89447	AbrB/MazE/MraZ-like
PAJ_0058	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
PAJ_0058	SSF81799	Putative methyltransferase TM0872, insert domain
PAJ_0060	SSF56519	Penicillin binding protein dimerisation domain
PAJ_0060	SSF56601	beta-lactamase/transpeptidase-like
PAJ_0061	SSF53244	MurD-like peptide ligases, peptide-binding domain
PAJ_0061	SSF53623	MurD-like peptide ligases, catalytic domain
PAJ_0061	SSF63418	MurE/MurF N-terminal domain
PAJ_0062	SSF53244	MurD-like peptide ligases, peptide-binding domain
PAJ_0062	SSF53623	MurD-like peptide ligases, catalytic domain
PAJ_0062	SSF63418	MurE/MurF N-terminal domain
PAJ_0064	SSF51984	MurCD N-terminal domain
PAJ_0064	SSF53244	MurD-like peptide ligases, peptide-binding domain
PAJ_0064	SSF53623	MurD-like peptide ligases, catalytic domain
PAJ_0066	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
PAJ_0067	SSF51984	MurCD N-terminal domain
PAJ_0067	SSF53244	MurD-like peptide ligases, peptide-binding domain
PAJ_0067	SSF53623	MurD-like peptide ligases, catalytic domain
PAJ_0068	SSF52440	PreATP-grasp domain
PAJ_0068	SSF56059	Glutathione synthetase ATP-binding domain-like
PAJ_0070	SSF53067	Actin-like ATPase domain
PAJ_0072	SSF52490	Tubulin nucleotide-binding domain-like
PAJ_0072	SSF55307	Tubulin C-terminal domain-like
PAJ_0073	SSF54211	Ribosomal protein S5 domain 2-like
PAJ_0075	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_0075	SSF81767	Pre-protein crosslinking domain of SecA
PAJ_0075	SSF81886	Helical scaffold and wing domains of SecA
PAJ_0076	SSF55811	Nudix
PAJ_0077	SSF57716	Glucocorticoid receptor-like (DNA-binding domain)
PAJ_0078	SSF160950	YacF-like
PAJ_0079	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_0080	SSF51412	Inosine monophosphate dehydrogenase (IMPDH)
PAJ_0082	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_0083	SSF54523	Pili subunits
PAJ_0084	SSF51690	Nicotinate/Quinolinate PRTase C-terminal domain-like
PAJ_0084	SSF54675	Nicotinate/Quinolinate PRTase N-terminal domain-like
PAJ_0085	SSF55846	N-acetylmuramoyl-L-alanine amidase-like
PAJ_0087	SSF75005	Arabinanase/levansucrase/invertase
PAJ_0088	SSF103473	MFS general substrate transporter
PAJ_0090	SSF46785	"Winged helix" DNA-binding domain
PAJ_0090	SSF48008	GntR ligand-binding domain-like
PAJ_0091	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
PAJ_0091	SSF52922	TK C-terminal domain-like
PAJ_0092	SSF47005	Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex
PAJ_0092	SSF51230	Single hybrid motif
PAJ_0092	SSF52777	CoA-dependent acyltransferases
PAJ_0093	SSF51905	FAD/NAD(P)-binding domain
PAJ_0093	SSF55424	FAD/NAD-linked reductases, dimerisation (C-terminal) domain
PAJ_0094	SSF46785	"Winged helix" DNA-binding domain
PAJ_0094	SSF53850	Periplasmic binding protein-like II
PAJ_0095	SSF51430	NAD(P)-linked oxidoreductase
PAJ_0096	SSF52016	LeuD/IlvD-like
PAJ_0096	SSF53732	Aconitase iron-sulfur domain
PAJ_0096	SSF74778	Aconitase B, N-terminal domain
PAJ_0099	SSF142764	YgbK-like
PAJ_0100	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
PAJ_0101	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
PAJ_0102	SSF53474	alpha/beta-Hydrolases
PAJ_0103	SSF56276	S-adenosylmethionine decarboxylase
PAJ_0104	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
PAJ_0106	SSF49503	Cupredoxins
PAJ_0107	SSF53383	PLP-dependent transferases
PAJ_0108	SSF53271	PRTase-like
PAJ_0109	SSF53056	beta-carbonic anhydrase, cab
PAJ_0110	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_0112	SSF50692	ADC-like
PAJ_0113	SSF52374	Nucleotidylyl transferase
PAJ_0114	SSF51621	Phosphoenolpyruvate/pyruvate domain
PAJ_0115	SSF55083	6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK
PAJ_0116	SSF81301	Nucleotidyltransferase
PAJ_0116	SSF81891	Poly A polymerase C-terminal region-like
PAJ_0117	SSF52374	Nucleotidylyl transferase
PAJ_0118	SSF109635	DnaK suppressor protein DksA, alpha-hairpin domain
PAJ_0118	SSF57716	Glucocorticoid receptor-like (DNA-binding domain)
PAJ_0120	SSF55144	LigT-like
PAJ_0121	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_0122	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_0122	SSF53955	Lysozyme-like
PAJ_0122	SSF56601	beta-lactamase/transpeptidase-like
PAJ_0123	SSF56935	Porins
PAJ_0124	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_0125	SSF53807	"Helical backbone" metal receptor
PAJ_0126	SSF81345	ABC transporter involved in vitamin B12 uptake, BtuC
PAJ_0127	SSF53383	PLP-dependent transferases
PAJ_0128	SSF89360	HesB-like domain
PAJ_0129	SSF53807	"Helical backbone" metal receptor
PAJ_0130	SSF53167	Purine and uridine phosphorylases
PAJ_0131	SSF50156	PDZ domain-like
PAJ_0131	SSF50494	Trypsin-like serine proteases
PAJ_0133	SSF48230	Chondroitin AC/alginate lyase
PAJ_0135	SSF51161	Trimeric LpxA-like enzymes
PAJ_0136	SSF109604	HD-domain/PDEase-like
PAJ_0136	SSF55021	ACT-like
PAJ_0136	SSF81301	Nucleotidyltransferase
PAJ_0136	SSF81593	Nucleotidyltransferase substrate binding subunit/domain
PAJ_0137	SSF55920	Creatinase/aminopeptidase
PAJ_0138	SSF52313	Ribosomal protein S2
PAJ_0140	SSF46934	UBA-like
PAJ_0140	SSF54713	Elongation factor Ts (EF-Ts), dimerisation domain
PAJ_0141	SSF53633	Carbamate kinase-like
PAJ_0142	SSF55194	Ribosome recycling factor, RRF
PAJ_0143	SSF51735	NAD(P)-binding Rossmann-fold domains
PAJ_0143	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
PAJ_0143	SSF69055	1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain
PAJ_0144	SSF64005	Undecaprenyl diphosphate synthase
PAJ_0145	SSF103473	MFS general substrate transporter
PAJ_0146	SSF50156	PDZ domain-like
PAJ_0148	SSF111384	OmpH-like
PAJ_0149	SSF51161	Trimeric LpxA-like enzymes
PAJ_0150	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
PAJ_0151	SSF51161	Trimeric LpxA-like enzymes
PAJ_0152	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
PAJ_0153	SSF53098	Ribonuclease H-like
PAJ_0154	SSF89550	PHP domain-like
PAJ_0155	SSF52096	ClpP/crotonase
PAJ_0157	SSF53383	PLP-dependent transferases
PAJ_0157	SSF55904	Ornithine decarboxylase C-terminal domain
PAJ_0158	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
PAJ_0159	SSF52402	Adenine nucleotide alpha hydrolases-like
PAJ_0159	SSF56037	PheT/TilS domain
PAJ_0159	SSF82829	MesJ substrate recognition domain-like
PAJ_0160	SSF101744	Rof/RNase P subunit-like
PAJ_0162	SSF75620	Release factor
PAJ_0163	SSF52954	Class II aaRS ABD-related
PAJ_0163	SSF55681	Class II aaRS and biotin synthetases
PAJ_0163	SSF55826	YbaK/ProRS associated domain
PAJ_0164	SSF118196	YaeB-like
PAJ_0166	SSF53850	Periplasmic binding protein-like II
PAJ_0167	SSF161098	MetI-like
PAJ_0168	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_0168	SSF55021	ACT-like
PAJ_0169	SSF56784	HAD-like
PAJ_0170	SSF46785	"Winged helix" DNA-binding domain
PAJ_0170	SSF53850	Periplasmic binding protein-like II
PAJ_0171	SSF56219	DNase I-like
PAJ_0172	SSF53955	Lysozyme-like
PAJ_0172	SSF54106	LysM domain
PAJ_0173	SSF56281	Metallo-hydrolase/oxidoreductase
PAJ_0174	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
PAJ_0175	SSF53098	Ribonuclease H-like
PAJ_0176	SSF53098	Ribonuclease H-like
PAJ_0177	SSF51569	Aldolase
PAJ_0179	SSF46785	"Winged helix" DNA-binding domain
PAJ_0179	SSF48008	GntR ligand-binding domain-like
PAJ_0181	SSF88713	Glycoside hydrolase/deacetylase
PAJ_0182	SSF53639	AraD/HMP-PK domain-like
PAJ_0183	SSF53850	Periplasmic binding protein-like II
PAJ_0184	SSF51197	Clavaminate synthase-like
PAJ_0185	SSF161098	MetI-like
PAJ_0185	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_0186	SSF46785	"Winged helix" DNA-binding domain
PAJ_0186	SSF53850	Periplasmic binding protein-like II
PAJ_0187	SSF51905	FAD/NAD(P)-binding domain
PAJ_0188	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
PAJ_0189	SSF53187	Zn-dependent exopeptidases
PAJ_0189	SSF55031	Bacterial exopeptidase dimerisation domain
PAJ_0190	SSF51197	Clavaminate synthase-like
PAJ_0191	SSF46785	"Winged helix" DNA-binding domain
PAJ_0191	SSF53850	Periplasmic binding protein-like II
PAJ_0192	SSF75304	Amidase signature (AS) enzymes
PAJ_0193	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
PAJ_0194	SSF46689	Homeodomain-like
PAJ_0194	SSF53697	SIS domain
PAJ_0195	SSF53850	Periplasmic binding protein-like II
PAJ_0196	SSF161098	MetI-like
PAJ_0197	SSF161098	MetI-like
PAJ_0198	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_0199	SSF53383	PLP-dependent transferases
PAJ_0200	SSF53187	Zn-dependent exopeptidases
PAJ_0200	SSF55031	Bacterial exopeptidase dimerisation domain
PAJ_0201	SSF158694	UraD-Like
PAJ_0202	SSF49472	Transthyretin (synonym: prealbumin)
PAJ_0203	SSF48113	Heme-dependent peroxidases
PAJ_0204	SSF56317	Carbon-nitrogen hydrolase
PAJ_0205	SSF53383	PLP-dependent transferases
PAJ_0206	SSF53639	AraD/HMP-PK domain-like
PAJ_0207	SSF56784	HAD-like
PAJ_0208	SSF51182	RmlC-like cupins
PAJ_0209	SSF100950	NagB/RpiA/CoA transferase-like
PAJ_0210	SSF56112	Protein kinase-like (PK-like)
PAJ_0211	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
PAJ_0211	SSF56645	Acyl-CoA dehydrogenase NM domain-like
PAJ_0212	SSF53697	SIS domain
PAJ_0213	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
PAJ_0214	SSF141523	L,D-transpeptidase catalytic domain-like
PAJ_0215	SSF100879	Lesion bypass DNA polymerase (Y-family), little finger domain
PAJ_0215	SSF56672	DNA/RNA polymerases
PAJ_0216	SSF53822	Periplasmic binding protein-like I
PAJ_0218	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_0219	SSF53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes
PAJ_0221	SSF51735	NAD(P)-binding Rossmann-fold domains
PAJ_0222	SSF53187	Zn-dependent exopeptidases
PAJ_0223	SSF53271	PRTase-like
PAJ_0224	SSF53474	alpha/beta-Hydrolases
PAJ_0226	SSF56935	Porins
PAJ_0227	SSF53633	Carbamate kinase-like
PAJ_0227	SSF88697	PUA domain-like
PAJ_0228	SSF53720	ALDH-like
PAJ_0229	SSF51306	LexA/Signal peptidase
PAJ_0230	SSF53955	Lysozyme-like
PAJ_0231	SSF51126	Pectin lyase-like
PAJ_0232	SSF50692	ADC-like
PAJ_0232	SSF53706	Formate dehydrogenase/DMSO reductase, domains 1-3
PAJ_0233	SSF54862	4Fe-4S ferredoxins
PAJ_0234	SSF81342	Transmembrane di-heme cytochromes
PAJ_0235	SSF51197	Clavaminate synthase-like
PAJ_0236	SSF46689	Homeodomain-like
PAJ_0236	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_0236	SSF55785	PYP-like sensor domain (PAS domain)
PAJ_0237	SSF56796	Dehydroquinate synthase-like
PAJ_0238	SSF82549	DAK1/DegV-like
PAJ_0239	SSF101473	DhaL-like
PAJ_0240	SSF47831	Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain
PAJ_0240	SSF52009	Phosphohistidine domain
PAJ_0240	SSF53062	PTS system fructose IIA component-like
PAJ_0240	SSF55594	HPr-like
PAJ_0242	SSF51126	Pectin lyase-like
PAJ_0245	SSF46785	"Winged helix" DNA-binding domain
PAJ_0245	SSF53850	Periplasmic binding protein-like II
PAJ_0246	SSF52218	Flavoproteins
PAJ_0247	SSF50249	Nucleic acid-binding proteins
PAJ_0248	SSF50341	CheW-like
PAJ_0248	SSF52172	CheY-like
PAJ_0249	SSF101756	Hypothetical protein YgiW
PAJ_0250	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_0251	SSF51556	Metallo-dependent hydrolases
PAJ_0252	SSF46785	"Winged helix" DNA-binding domain
PAJ_0252	SSF53850	Periplasmic binding protein-like II
PAJ_0253	SSF103473	MFS general substrate transporter
PAJ_0255	SSF46785	"Winged helix" DNA-binding domain
PAJ_0255	SSF48008	GntR ligand-binding domain-like
PAJ_0256	SSF51395	FMN-linked oxidoreductases
PAJ_0257	SSF82784	OsmC-like
PAJ_0258	SSF52794	PTS system IIB component-like
PAJ_0260	SSF46973	Enzyme IIa from lactose specific PTS, IIa-lac
PAJ_0261	SSF51445	(Trans)glycosidases
PAJ_0262	SSF47413	lambda repressor-like DNA-binding domains
PAJ_0262	SSF53822	Periplasmic binding protein-like I
PAJ_0266	SSF51905	FAD/NAD(P)-binding domain
PAJ_0266	SSF55424	FAD/NAD-linked reductases, dimerisation (C-terminal) domain
PAJ_0267	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
PAJ_0267	SSF51735	NAD(P)-binding Rossmann-fold domains
PAJ_0270	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_0272	SSF51182	RmlC-like cupins
PAJ_0274	SSF53067	Actin-like ATPase domain
PAJ_0275	SSF74653	TolA/TonB C-terminal domain
PAJ_0276	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_0277	SSF56300	Metallo-dependent phosphatases
PAJ_0278	SSF46894	C-terminal effector domain of the bipartite response regulators
PAJ_0278	SSF52172	CheY-like
PAJ_0279	SSF47384	Homodimeric domain of signal transducing histidine kinase
PAJ_0279	SSF55785	PYP-like sensor domain (PAS domain)
PAJ_0279	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
PAJ_0280	SSF53850	Periplasmic binding protein-like II
PAJ_0281	SSF51726	UROD/MetE-like
PAJ_0285	SSF53254	Phosphoglycerate mutase-like
PAJ_0286	SSF56655	Carbohydrate phosphatase
PAJ_0288	SSF111337	QueA-like
PAJ_0289	SSF51713	tRNA-guanine transglycosylase
PAJ_0291	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
PAJ_0292	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
PAJ_0295	SSF53597	Dihydrofolate reductase-like
PAJ_0295	SSF53927	Cytidine deaminase-like
PAJ_0296	SSF52121	Lumazine synthase
PAJ_0297	SSF48013	NusB-like
PAJ_0298	SSF55326	PurM N-terminal domain-like
PAJ_0298	SSF56042	PurM C-terminal domain-like
PAJ_0299	SSF101307	YutG-like
PAJ_0301	SSF51430	NAD(P)-linked oxidoreductase
PAJ_0302	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
PAJ_0302	SSF52922	TK C-terminal domain-like
PAJ_0303	SSF48576	Terpenoid synthases
PAJ_0304	SSF116842	XseB-like
PAJ_0305	SSF143437	THUMP domain-like
PAJ_0305	SSF52402	Adenine nucleotide alpha hydrolases-like
PAJ_0305	SSF52821	Rhodanese/Cell cycle control phosphatase
PAJ_0306	SSF52317	Class I glutamine amidotransferase-like
PAJ_0307	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
PAJ_0307	SSF51735	NAD(P)-binding Rossmann-fold domains
PAJ_0308	SSF89963	YajQ-like
PAJ_0309	SSF46689	Homeodomain-like
PAJ_0309	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_0309	SSF55781	GAF domain-like
PAJ_0310	SSF53720	ALDH-like
PAJ_0311	SSF50129	GroES-like
PAJ_0311	SSF51735	NAD(P)-binding Rossmann-fold domains
PAJ_0312	SSF103473	MFS general substrate transporter
PAJ_0315	SSF81452	Cytochrome c oxidase subunit III-like
PAJ_0316	SSF81442	Cytochrome c oxidase subunit I-like
PAJ_0317	SSF49503	Cupredoxins
PAJ_0317	SSF81464	Cytochrome c oxidase subunit II-like, transmembrane region
PAJ_0318	SSF103473	MFS general substrate transporter
PAJ_0320	SSF82657	BolA-like
PAJ_0322	SSF102735	Trigger factor ribosome-binding domain
PAJ_0322	SSF109998	Triger factor/SurA peptide-binding domain-like
PAJ_0322	SSF54534	FKBP-like
PAJ_0323	SSF52096	ClpP/crotonase
PAJ_0324	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_0324	SSF57716	Glucocorticoid receptor-like (DNA-binding domain)
PAJ_0325	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_0325	SSF54211	Ribosomal protein S5 domain 2-like
PAJ_0325	SSF88697	PUA domain-like
PAJ_0326	SSF47729	IHF-like DNA-binding proteins
PAJ_0328	SSF47781	RuvA domain 2-like
PAJ_0329	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
PAJ_0330	SSF52402	Adenine nucleotide alpha hydrolases-like
PAJ_0331	SSF53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes
PAJ_0332	SSF46785	"Winged helix" DNA-binding domain
PAJ_0332	SSF54909	Dimeric alpha+beta barrel
PAJ_0333	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_0333	SSF90123	ABC transporter transmembrane region
PAJ_0334	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_0334	SSF90123	ABC transporter transmembrane region
PAJ_0335	SSF54913	GlnB-like
PAJ_0336	SSF111352	Ammonium transporter
PAJ_0337	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
PAJ_0339	SSF46767	Methylated DNA-protein cysteine methyltransferase, C-terminal domain
PAJ_0340	SSF68989	Hemolysin expression modulating protein HHA
PAJ_0342	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_0343	SSF81345	ABC transporter involved in vitamin B12 uptake, BtuC
PAJ_0344	SSF53807	"Helical backbone" metal receptor
PAJ_0345	SSF57840	Ribosomal protein L36
PAJ_0346	SSF143800	L28p-like
PAJ_0347	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
PAJ_0347	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
PAJ_0347	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
PAJ_0348	SSF111369	HlyD-like secretion proteins
PAJ_0349	SSF46689	Homeodomain-like
PAJ_0349	SSF48498	Tetracyclin repressor-like, C-terminal domain
PAJ_0353	SSF53271	PRTase-like
PAJ_0354	SSF48019	post-AAA+ oligomerization domain-like
PAJ_0354	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_0355	SSF82607	YbaB-like
PAJ_0356	SSF111304	Recombination protein RecR
PAJ_0358	SSF110942	HSP90 C-terminal domain
PAJ_0358	SSF54211	Ribosomal protein S5 domain 2-like
PAJ_0358	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
PAJ_0359	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_0360	SSF53613	Ribokinase-like
PAJ_0361	SSF51735	NAD(P)-binding Rossmann-fold domains
PAJ_0362	SSF55816	5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain
PAJ_0362	SSF56300	Metallo-dependent phosphatases
PAJ_0363	SSF46785	"Winged helix" DNA-binding domain
PAJ_0363	SSF53850	Periplasmic binding protein-like II
PAJ_0364	SSF55826	YbaK/ProRS associated domain
PAJ_0366	SSF55008	HMA, heavy metal-associated domain
PAJ_0366	SSF56784	HAD-like
PAJ_0366	SSF81653	Calcium ATPase, transduction domain A
PAJ_0366	SSF81665	Calcium ATPase, transmembrane domain M
PAJ_0367	SSF46955	Putative DNA-binding domain
PAJ_0368	SSF141322	NfeD domain-like
PAJ_0369	SSF117892	Band 7/SPFH domain
PAJ_0370	SSF48452	TPR-like
PAJ_0370	SSF52833	Thioredoxin-like
PAJ_0371	SSF51735	NAD(P)-binding Rossmann-fold domains
PAJ_0372	SSF52266	SGNH hydrolase
PAJ_0373	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_0375	SSF51246	Rudiment single hybrid motif
PAJ_0375	SSF52440	PreATP-grasp domain
PAJ_0375	SSF56059	Glutathione synthetase ATP-binding domain-like
PAJ_0376	SSF52255	N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE)
PAJ_0378	SSF56300	Metallo-dependent phosphatases
PAJ_0379	SSF50891	Cyclophilin-like
PAJ_0380	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
PAJ_0380	SSF52374	Nucleotidylyl transferase
PAJ_0381	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_0382	SSF55174	Alpha-L RNA-binding motif
PAJ_0383	SSF51735	NAD(P)-binding Rossmann-fold domains
PAJ_0383	SSF53223	Aminoacid dehydrogenase-like, N-terminal domain
PAJ_0386	SSF53448	Nucleotide-diphospho-sugar transferases
PAJ_0390	SSF51126	Pectin lyase-like
PAJ_0398	SSF53850	Periplasmic binding protein-like II
PAJ_0400	SSF55144	LigT-like
PAJ_0401	SSF53743	FucI/AraA N-terminal and middle domains
PAJ_0402	SSF103473	MFS general substrate transporter
PAJ_0403	SSF51445	(Trans)glycosidases
PAJ_0404	SSF46785	"Winged helix" DNA-binding domain
PAJ_0404	SSF53067	Actin-like ATPase domain
PAJ_0405	SSF51905	FAD/NAD(P)-binding domain
PAJ_0406	SSF103515	Autotransporter
PAJ_0406	SSF51126	Pectin lyase-like
PAJ_0408	SSF103473	MFS general substrate transporter
PAJ_0409	SSF49401	Bacterial adhesins
PAJ_0410	SSF49401	Bacterial adhesins
PAJ_0411	SSF141729	FimD N-terminal domain-like
PAJ_0412	SSF49354	PapD-like
PAJ_0412	SSF49584	Periplasmic chaperone C-domain
PAJ_0413	SSF49401	Bacterial adhesins
PAJ_0414	SSF49401	Bacterial adhesins
PAJ_0416	SSF49401	Bacterial adhesins
PAJ_0417	SSF141868	EAL domain-like
PAJ_0418	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
PAJ_0419	SSF51126	Pectin lyase-like
PAJ_0422	SSF111331	NAD kinase/diacylglycerol kinase-like
PAJ_0425	SSF48317	Acid phosphatase/Vanadium-dependent haloperoxidase
PAJ_0426	SSF50129	GroES-like
PAJ_0426	SSF51735	NAD(P)-binding Rossmann-fold domains
PAJ_0428	SSF53807	"Helical backbone" metal receptor
PAJ_0430	SSF56784	HAD-like
PAJ_0431	SSF56796	Dehydroquinate synthase-like
PAJ_0434	SSF56925	OMPA-like
PAJ_0435	SSF50249	Nucleic acid-binding proteins
PAJ_0436	SSF55729	Acyl-CoA N-acyltransferases (Nat)
PAJ_0437	SSF56317	Carbon-nitrogen hydrolase
PAJ_0439	SSF102114	Radical SAM enzymes
PAJ_0440	SSF55681	Class II aaRS and biotin synthetases
PAJ_0441	SSF117991	YbeD/HP0495-like
PAJ_0442	SSF56601	beta-lactamase/transpeptidase-like
PAJ_0442	SSF69189	Penicillin-binding protein associated domain
PAJ_0443	SSF110997	Sporulation related repeat
PAJ_0443	SSF50685	Barwin-like endoglucanases
PAJ_0445	SSF56519	Penicillin binding protein dimerisation domain
PAJ_0445	SSF56601	beta-lactamase/transpeptidase-like
PAJ_0446	SSF75217	alpha/beta knot
PAJ_0447	SSF81301	Nucleotidyltransferase
PAJ_0448	SSF52374	Nucleotidylyl transferase
PAJ_0449	SSF48019	post-AAA+ oligomerization domain-like
PAJ_0449	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_0451	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
PAJ_0451	SSF50677	ValRS/IleRS/LeuRS editing domain
PAJ_0451	SSF52374	Nucleotidylyl transferase
PAJ_0453	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_0454	SSF161098	MetI-like
PAJ_0455	SSF161098	MetI-like
PAJ_0456	SSF53850	Periplasmic binding protein-like II
PAJ_0457	SSF56317	Carbon-nitrogen hydrolase
PAJ_0458	SSF54631	CBS-domain pair
PAJ_0458	SSF56176	FAD-binding/transporter-associated domain-like
PAJ_0459	SSF55486	Metalloproteases ("zincins"), catalytic domain
PAJ_0460	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_0462	SSF102114	Radical SAM enzymes
PAJ_0463	SSF51905	FAD/NAD(P)-binding domain
PAJ_0464	SSF52402	Adenine nucleotide alpha hydrolases-like
PAJ_0464	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
PAJ_0465	SSF56784	HAD-like
PAJ_0466	SSF46785	"Winged helix" DNA-binding domain
PAJ_0466	SSF53067	Actin-like ATPase domain
PAJ_0467	SSF51338	Composite domain of metallo-dependent hydrolases
PAJ_0467	SSF51556	Metallo-dependent hydrolases
PAJ_0468	SSF100950	NagB/RpiA/CoA transferase-like
PAJ_0469	SSF51261	Duplicated hybrid motif
PAJ_0469	SSF55604	Glucose permease domain IIB
PAJ_0470	SSF50715	Ribosomal protein L25-like
PAJ_0470	SSF52374	Nucleotidylyl transferase
PAJ_0471	SSF46785	"Winged helix" DNA-binding domain
PAJ_0472	SSF52218	Flavoproteins
PAJ_0474	SSF53474	alpha/beta-Hydrolases
PAJ_0475	SSF47598	Ribbon-helix-helix
PAJ_0475	SSF82808	Replication modulator SeqA, C-terminal DNA-binding domain
PAJ_0476	SSF53738	Phosphoglucomutase, first 3 domains
PAJ_0476	SSF55957	Phosphoglucomutase, C-terminal domain
PAJ_0477	SSF52172	CheY-like
PAJ_0480	SSF48173	Cryptochrome/photolyase FAD-binding domain
PAJ_0480	SSF52425	Cryptochrome/photolyase, N-terminal domain
PAJ_0481	SSF102705	NIF3 (NGG1p interacting factor 3)-like
PAJ_0482	SSF160467	PH0987 N-terminal domain-like
PAJ_0482	SSF50891	Cyclophilin-like
PAJ_0483	SSF50891	Cyclophilin-like
PAJ_0484	SSF88713	Glycoside hydrolase/deacetylase
PAJ_0487	SSF53182	Pyrrolidone carboxyl peptidase (pyroglutamate aminopeptidase)
PAJ_0488	SSF46946	S13-like H2TH domain
PAJ_0488	SSF57716	Glucocorticoid receptor-like (DNA-binding domain)
PAJ_0488	SSF81624	N-terminal domain of MutM-like DNA repair proteins
PAJ_0489	SSF55729	Acyl-CoA N-acyltransferases (Nat)
PAJ_0490	SSF48256	Citrate synthase
PAJ_0491	SSF81343	Fumarate reductase respiratory complex transmembrane subunits
PAJ_0492	SSF81343	Fumarate reductase respiratory complex transmembrane subunits
PAJ_0493	SSF46977	Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain
PAJ_0493	SSF51905	FAD/NAD(P)-binding domain
PAJ_0493	SSF56425	Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain
PAJ_0495	SSF46548	alpha-helical ferredoxin
PAJ_0495	SSF54292	2Fe-2S ferredoxin-like
PAJ_0496	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
PAJ_0497	SSF47005	Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex
PAJ_0497	SSF51230	Single hybrid motif
PAJ_0497	SSF52777	CoA-dependent acyltransferases
PAJ_0498	SSF52210	Succinyl-CoA synthetase domains
PAJ_0498	SSF56059	Glutathione synthetase ATP-binding domain-like
PAJ_0500	SSF51735	NAD(P)-binding Rossmann-fold domains
PAJ_0500	SSF52210	Succinyl-CoA synthetase domains
PAJ_0504	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
PAJ_0507	SSF74653	TolA/TonB C-terminal domain
PAJ_0508	SSF52964	TolB, N-terminal domain
PAJ_0508	SSF69304	Tricorn protease N-terminal domain
PAJ_0509	SSF103088	OmpA-like
PAJ_0510	SSF48452	TPR-like
PAJ_0511	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
PAJ_0512	SSF46689	Homeodomain-like
PAJ_0512	SSF48150	DNA-glycosylase
PAJ_0512	SSF55945	TATA-box binding protein-like
PAJ_0512	SSF57884	Ada DNA repair protein, N-terminal domain (N-Ada 10)
PAJ_0513	SSF46767	Methylated DNA-protein cysteine methyltransferase, C-terminal domain
PAJ_0513	SSF53155	Methylated DNA-protein cysteine methyltransferase domain
PAJ_0514	SSF142754	NadA-like
PAJ_0516	SSF160240	Cation efflux protein cytoplasmic domain-like
PAJ_0516	SSF161111	Cation efflux protein transmembrane domain-like
PAJ_0517	SSF47226	Histidine-containing phosphotransfer domain, HPT domain
PAJ_0517	SSF47384	Homodimeric domain of signal transducing histidine kinase
PAJ_0517	SSF52172	CheY-like
PAJ_0517	SSF53850	Periplasmic binding protein-like II
PAJ_0517	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
PAJ_0518	SSF46894	C-terminal effector domain of the bipartite response regulators
PAJ_0518	SSF52172	CheY-like
PAJ_0520	SSF51569	Aldolase
PAJ_0521	SSF53254	Phosphoglycerate mutase-like
PAJ_0522	SSF74650	Galactose mutarotase-like
PAJ_0523	SSF54211	Ribosomal protein S5 domain 2-like
PAJ_0523	SSF55060	GHMP Kinase, C-terminal domain
PAJ_0524	SSF54197	HIT-like
PAJ_0525	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_0526	SSF46785	"Winged helix" DNA-binding domain
PAJ_0526	SSF50331	MOP-like
PAJ_0528	SSF53850	Periplasmic binding protein-like II
PAJ_0529	SSF161098	MetI-like
PAJ_0530	SSF50331	MOP-like
PAJ_0530	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_0531	SSF56784	HAD-like
PAJ_0532	SSF50974	Nitrous oxide reductase, N-terminal domain
PAJ_0533	SSF49777	PEBP-like
PAJ_0534	SSF53383	PLP-dependent transferases
PAJ_0535	SSF102114	Radical SAM enzymes
PAJ_0536	SSF53383	PLP-dependent transferases
PAJ_0537	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
PAJ_0538	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_0539	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_0540	SSF46600	C-terminal UvrC-binding domain of UvrB
PAJ_0540	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_0541	SSF142338	CofD-like
PAJ_0542	SSF102114	Radical SAM enzymes
PAJ_0543	SSF53218	Molybdenum cofactor biosynthesis proteins
PAJ_0544	SSF55040	Molybdenum cofactor biosynthesis protein C, MoaC
PAJ_0545	SSF54285	MoaD/ThiS
PAJ_0546	SSF54690	Molybdopterin synthase subunit MoaE
PAJ_0550	SSF56024	Phospholipase D/nuclease
PAJ_0551	SSF56219	DNase I-like
PAJ_0553	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_0554	SSF51395	FMN-linked oxidoreductases
PAJ_0555	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_0558	SSF143865	CorA soluble domain-like
PAJ_0558	SSF144083	Magnesium transport protein CorA, transmembrane region
PAJ_0559	SSF141523	L,D-transpeptidase catalytic domain-like
PAJ_0560	SSF48208	Six-hairpin glycosidases
PAJ_0561	SSF51735	NAD(P)-binding Rossmann-fold domains
PAJ_0564	SSF56601	beta-lactamase/transpeptidase-like
PAJ_0565	SSF50182	Sm-like ribonucleoproteins
PAJ_0565	SSF82689	Mechanosensitive channel protein MscS (YggB), C-terminal domain
PAJ_0565	SSF82861	Mechanosensitive channel protein MscS (YggB), transmembrane region
PAJ_0566	SSF55103	FAD-linked oxidases, C-terminal domain
PAJ_0566	SSF56176	FAD-binding/transporter-associated domain-like
PAJ_0567	SSF51445	(Trans)glycosidases
PAJ_0567	SSF52279	Beta-D-glucan exohydrolase, C-terminal domain
PAJ_0570	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
PAJ_0571	SSF55811	Nudix
PAJ_0572	SSF53850	Periplasmic binding protein-like II
PAJ_0573	SSF161098	MetI-like
PAJ_0574	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_0574	SSF54631	CBS-domain pair
PAJ_0575	SSF161098	MetI-like
PAJ_0576	SSF46955	Putative DNA-binding domain
PAJ_0577	SSF47413	lambda repressor-like DNA-binding domains
PAJ_0577	SSF51182	RmlC-like cupins
PAJ_0578	SSF55729	Acyl-CoA N-acyltransferases (Nat)
PAJ_0579	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_0580	SSF47648	Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain
PAJ_0580	SSF52418	Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain
PAJ_0581	SSF53187	Zn-dependent exopeptidases
PAJ_0581	SSF55031	Bacterial exopeptidase dimerisation domain
PAJ_0582	SSF47413	lambda repressor-like DNA-binding domains
PAJ_0582	SSF53822	Periplasmic binding protein-like I
PAJ_0583	SSF51604	Enolase C-terminal domain-like
PAJ_0583	SSF54826	Enolase N-terminal domain-like
PAJ_0584	SSF103473	MFS general substrate transporter
PAJ_0585	SSF111326	Urocanase
PAJ_0586	SSF48557	L-aspartase-like
PAJ_0587	SSF46785	"Winged helix" DNA-binding domain
PAJ_0587	SSF64288	Chorismate lyase-like
PAJ_0588	SSF51182	RmlC-like cupins
PAJ_0589	SSF51338	Composite domain of metallo-dependent hydrolases
PAJ_0589	SSF51556	Metallo-dependent hydrolases
PAJ_0590	SSF51338	Composite domain of metallo-dependent hydrolases
PAJ_0590	SSF51556	Metallo-dependent hydrolases
PAJ_0591	SSF53187	Zn-dependent exopeptidases
PAJ_0592	SSF53850	Periplasmic binding protein-like II
PAJ_0593	SSF161098	MetI-like
PAJ_0594	SSF161098	MetI-like
PAJ_0595	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_0596	SSF48557	L-aspartase-like
PAJ_0597	SSF50475	FMN-binding split barrel
PAJ_0598	SSF51735	NAD(P)-binding Rossmann-fold domains
PAJ_0599	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
PAJ_0600	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_0602	SSF161098	MetI-like
PAJ_0603	SSF53850	Periplasmic binding protein-like II
PAJ_0604	SSF47240	Ferritin-like
PAJ_0605	SSF103481	Multidrug resistance efflux transporter EmrE
PAJ_0606	SSF56925	OMPA-like
PAJ_0607	SSF46785	"Winged helix" DNA-binding domain
PAJ_0609	SSF111369	HlyD-like secretion proteins
PAJ_0610	SSF103473	MFS general substrate transporter
PAJ_0611	SSF56954	Outer membrane efflux proteins (OEP)
PAJ_0612	SSF81273	H-NS histone-like proteins
PAJ_0613	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_0614	SSF69572	Activating enzymes of the ubiquitin-like proteins
PAJ_0615	SSF53218	Molybdenum cofactor biosynthesis proteins
PAJ_0615	SSF63867	MoeA C-terminal domain-like
PAJ_0615	SSF63882	MoeA N-terminal region -like
PAJ_0616	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
PAJ_0617	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_0618	SSF53850	Periplasmic binding protein-like II
PAJ_0619	SSF161098	MetI-like
PAJ_0620	SSF161098	MetI-like
PAJ_0622	SSF102114	Radical SAM enzymes
PAJ_0623	SSF53056	beta-carbonic anhydrase, cab
PAJ_0624	SSF50952	Soluble quinoprotein glucose dehydrogenase
PAJ_0625	SSF56784	HAD-like
PAJ_0626	SSF56601	beta-lactamase/transpeptidase-like
PAJ_0626	SSF69189	Penicillin-binding protein associated domain
PAJ_0627	SSF48317	Acid phosphatase/Vanadium-dependent haloperoxidase
PAJ_0628	SSF116726	TrkA C-terminal domain-like
PAJ_0630	SSF52833	Thioredoxin-like
PAJ_0632	SSF55469	FMN-dependent nitroreductase-like
PAJ_0633	SSF56059	Glutathione synthetase ATP-binding domain-like
PAJ_0635	SSF53850	Periplasmic binding protein-like II
PAJ_0636	SSF50331	MOP-like
PAJ_0636	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_0637	SSF161098	MetI-like
PAJ_0638	SSF161098	MetI-like
PAJ_0640	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
PAJ_0641	SSF53850	Periplasmic binding protein-like II
PAJ_0642	SSF161098	MetI-like
PAJ_0643	SSF161098	MetI-like
PAJ_0644	SSF161098	MetI-like
PAJ_0645	SSF53850	Periplasmic binding protein-like II
PAJ_0646	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_0648	SSF117782	YbjQ-like
PAJ_0649	SSF47090	PGBD-like
PAJ_0649	SSF55846	N-acetylmuramoyl-L-alanine amidase-like
PAJ_0650	SSF53383	PLP-dependent transferases
PAJ_0651	SSF52467	DHS-like NAD/FAD-binding domain
PAJ_0651	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
PAJ_0654	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_0655	SSF50249	Nucleic acid-binding proteins
PAJ_0656	SSF54736	ClpS-like
PAJ_0657	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_0657	SSF81923	Double Clp-N motif
PAJ_0658	SSF50249	Nucleic acid-binding proteins
PAJ_0659	SSF55729	Acyl-CoA N-acyltransferases (Nat)
PAJ_0660	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_0660	SSF90123	ABC transporter transmembrane region
PAJ_0661	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_0661	SSF90123	ABC transporter transmembrane region
PAJ_0662	SSF51905	FAD/NAD(P)-binding domain
PAJ_0663	SSF46785	"Winged helix" DNA-binding domain
PAJ_0663	SSF54909	Dimeric alpha+beta barrel
PAJ_0664	SSF46785	"Winged helix" DNA-binding domain
PAJ_0664	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_0665	SSF89392	Prokaryotic lipoproteins and lipoprotein localization factors
PAJ_0666	SSF48019	post-AAA+ oligomerization domain-like
PAJ_0666	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_0667	SSF46589	tRNA-binding arm
PAJ_0667	SSF55681	Class II aaRS and biotin synthetases
PAJ_0668	SSF103473	MFS general substrate transporter
PAJ_0669	SSF102114	Radical SAM enzymes
PAJ_0670	SSF51998	PFL-like glycyl radical enzymes
PAJ_0673	SSF53383	PLP-dependent transferases
PAJ_0674	SSF55205	EPT/RTPC-like
PAJ_0675	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_0676	SSF50249	Nucleic acid-binding proteins
PAJ_0677	SSF47729	IHF-like DNA-binding proteins
PAJ_0678	SSF56281	Metallo-hydrolase/oxidoreductase
PAJ_0679	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_0679	SSF90123	ABC transporter transmembrane region
PAJ_0680	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_0682	SSF158997	Trm112p-like
PAJ_0683	SSF53448	Nucleotide-diphospho-sugar transferases
PAJ_0685	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
PAJ_0686	SSF140570	MukF C-terminal domain-like
PAJ_0686	SSF46785	"Winged helix" DNA-binding domain
PAJ_0688	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_0689	SSF141523	L,D-transpeptidase catalytic domain-like
PAJ_0689	SSF47090	PGBD-like
PAJ_0690	SSF55166	Hedgehog/DD-peptidase
PAJ_0691	SSF56281	Metallo-hydrolase/oxidoreductase
PAJ_0692	SSF53383	PLP-dependent transferases
PAJ_0693	SSF56935	Porins
PAJ_0694	SSF50249	Nucleic acid-binding proteins
PAJ_0694	SSF55681	Class II aaRS and biotin synthetases
PAJ_0695	SSF51690	Nicotinate/Quinolinate PRTase C-terminal domain-like
PAJ_0695	SSF54675	Nicotinate/Quinolinate PRTase N-terminal domain-like
PAJ_0696	SSF55486	Metalloproteases ("zincins"), catalytic domain
PAJ_0696	SSF63737	Leukotriene A4 hydrolase N-terminal domain
PAJ_0697	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_0698	SSF161098	MetI-like
PAJ_0699	SSF51679	Bacterial luciferase-like
PAJ_0700	SSF53850	Periplasmic binding protein-like II
PAJ_0701	SSF52218	Flavoproteins
PAJ_0702	SSF53448	Nucleotide-diphospho-sugar transferases
PAJ_0704	SSF51395	FMN-linked oxidoreductases
PAJ_0706	SSF141673	MOSC N-terminal domain-like
PAJ_0706	SSF50800	PK beta-barrel domain-like
PAJ_0706	SSF54292	2Fe-2S ferredoxin-like
PAJ_0707	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
PAJ_0708	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_0711	SSF159594	XCC0632-like
PAJ_0713	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
PAJ_0714	SSF54211	Ribosomal protein S5 domain 2-like
PAJ_0716	SSF103088	OmpA-like
PAJ_0716	SSF56925	OMPA-like
PAJ_0717	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_0718	SSF159894	YgaC/TfoX-N like
PAJ_0721	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_0722	SSF52335	Methylglyoxal synthase-like
PAJ_0724	SSF51735	NAD(P)-binding Rossmann-fold domains
PAJ_0725	SSF141255	YccV-like
PAJ_0726	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
PAJ_0726	SSF88697	PUA domain-like
PAJ_0727	SSF54975	Acylphosphatase/BLUF domain-like
PAJ_0728	SSF69721	DsrC, the gamma subunit of dissimilatory sulfite reductase
PAJ_0730	SSF53254	Phosphoglycerate mutase-like
PAJ_0731	SSF53720	ALDH-like
PAJ_0733	SSF52218	Flavoproteins
PAJ_0734	SSF103481	Multidrug resistance efflux transporter EmrE
PAJ_0735	SSF46689	Homeodomain-like
PAJ_0735	SSF48498	Tetracyclin repressor-like, C-terminal domain
PAJ_0739	SSF46894	C-terminal effector domain of the bipartite response regulators
PAJ_0739	SSF75516	Pheromone-binding domain of LuxR-like quorum-sensing transcription factors
PAJ_0740	SSF55729	Acyl-CoA N-acyltransferases (Nat)
PAJ_0742	SSF46894	C-terminal effector domain of the bipartite response regulators
PAJ_0742	SSF52172	CheY-like
PAJ_0743	SSF46600	C-terminal UvrC-binding domain of UvrB
PAJ_0743	SSF47781	RuvA domain 2-like
PAJ_0743	SSF82771	GIY-YIG endonuclease
PAJ_0745	SSF56349	DNA breaking-rejoining enzymes
PAJ_0749	SSF47413	lambda repressor-like DNA-binding domains
PAJ_0749	SSF51306	LexA/Signal peptidase
PAJ_0752	SSF109709	KorB DNA-binding domain-like
PAJ_0752	SSF110849	ParB/Sulfiredoxin
PAJ_0757	SSF47413	lambda repressor-like DNA-binding domains
PAJ_0758	SSF54611	SecB-like
PAJ_0762	SSF52096	ClpP/crotonase
PAJ_0763	SSF56563	Major capsid protein gp5
PAJ_0768	SSF102712	JAB1/MPN domain
PAJ_0768	SSF54001	Cysteine proteinases
PAJ_0770	SSF49265	Fibronectin type III
PAJ_0773	SSF100879	Lesion bypass DNA polymerase (Y-family), little finger domain
PAJ_0773	SSF56672	DNA/RNA polymerases
PAJ_0776	SSF52091	SpoIIaa-like
PAJ_0778	SSF46689	Homeodomain-like
PAJ_0778	SSF51215	Regulatory protein AraC
PAJ_0779	SSF46785	"Winged helix" DNA-binding domain
PAJ_0780	SSF103473	MFS general substrate transporter
PAJ_0781	SSF111369	HlyD-like secretion proteins
PAJ_0782	SSF56954	Outer membrane efflux proteins (OEP)
PAJ_0783	SSF51445	(Trans)glycosidases
PAJ_0784	SSF56024	Phospholipase D/nuclease
PAJ_0786	SSF74650	Galactose mutarotase-like
PAJ_0786	SSF81296	E set domains
PAJ_0787	SSF53448	Nucleotide-diphospho-sugar transferases
PAJ_0790	SSF103473	MFS general substrate transporter
PAJ_0791	SSF46689	Homeodomain-like
PAJ_0791	SSF48498	Tetracyclin repressor-like, C-terminal domain
PAJ_0793	SSF52821	Rhodanese/Cell cycle control phosphatase
PAJ_0794	SSF101874	YceI-like
PAJ_0795	SSF81342	Transmembrane di-heme cytochromes
PAJ_0796	SSF51905	FAD/NAD(P)-binding domain
PAJ_0796	SSF54373	FAD-linked reductases, C-terminal domain
PAJ_0798	SSF54857	DNA damage-inducible protein DinI
PAJ_0799	SSF51556	Metallo-dependent hydrolases
PAJ_0801	SSF55729	Acyl-CoA N-acyltransferases (Nat)
PAJ_0802	SSF46785	"Winged helix" DNA-binding domain
PAJ_0803	SSF51735	NAD(P)-binding Rossmann-fold domains
PAJ_0803	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
PAJ_0806	SSF47170	Aspartate receptor, ligand-binding domain
PAJ_0806	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
PAJ_0807	SSF140566	FlgN-like
PAJ_0808	SSF101498	Anti-sigma factor FlgM
PAJ_0813	SSF117143	Flagellar hook protein flgE
PAJ_0814	SSF117143	Flagellar hook protein flgE
PAJ_0815	SSF117143	Flagellar hook protein flgE
PAJ_0819	SSF64518	Phase 1 flagellin
PAJ_0820	SSF64518	Phase 1 flagellin
PAJ_0821	SSF50249	Nucleic acid-binding proteins
PAJ_0822	SSF55120	Pseudouridine synthase
PAJ_0822	SSF55174	Alpha-L RNA-binding motif
PAJ_0823	SSF52972	ITPase-like
PAJ_0825	SSF57829	Zn-binding ribosomal proteins
PAJ_0826	SSF53659	Isocitrate/Isopropylmalate dehydrogenase-like
PAJ_0827	SSF53901	Thiolase-like
PAJ_0828	SSF52151	FabD/lysophospholipase-like
PAJ_0828	SSF55048	Probable ACP-binding domain of malonyl-CoA ACP transacylase
PAJ_0829	SSF51735	NAD(P)-binding Rossmann-fold domains
PAJ_0830	SSF47336	ACP-like
PAJ_0831	SSF53901	Thiolase-like
PAJ_0832	SSF56752	D-aminoacid aminotransferase-like PLP-dependent enzymes
PAJ_0834	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_0835	SSF48019	post-AAA+ oligomerization domain-like
PAJ_0835	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_0836	SSF51556	Metallo-dependent hydrolases
PAJ_0837	SSF55604	Glucose permease domain IIB
PAJ_0838	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
PAJ_0839	SSF54197	HIT-like
PAJ_0842	SSF56112	Protein kinase-like (PK-like)
PAJ_0843	SSF51445	(Trans)glycosidases
PAJ_0845	SSF51905	FAD/NAD(P)-binding domain
PAJ_0847	SSF46785	"Winged helix" DNA-binding domain
PAJ_0848	SSF69118	AhpD-like
PAJ_0849	SSF141259	CarD-like
PAJ_0849	SSF143517	TRCF domain-like
PAJ_0849	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_0851	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_0853	SSF52467	DHS-like NAD/FAD-binding domain
PAJ_0854	SSF53187	Zn-dependent exopeptidases
PAJ_0854	SSF55031	Bacterial exopeptidase dimerisation domain
PAJ_0855	SSF51197	Clavaminate synthase-like
PAJ_0856	SSF47384	Homodimeric domain of signal transducing histidine kinase
PAJ_0856	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
PAJ_0857	SSF52172	CheY-like
PAJ_0858	SSF48557	L-aspartase-like
PAJ_0859	SSF101322	YcfC-like
PAJ_0860	SSF52402	Adenine nucleotide alpha hydrolases-like
PAJ_0861	SSF55811	Nudix
PAJ_0862	SSF55120	Pseudouridine synthase
PAJ_0863	SSF53659	Isocitrate/Isopropylmalate dehydrogenase-like
PAJ_0864	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
PAJ_0865	SSF49354	PapD-like
PAJ_0865	SSF49584	Periplasmic chaperone C-domain
PAJ_0866	SSF49401	Bacterial adhesins
PAJ_0868	SSF49354	PapD-like
PAJ_0868	SSF49584	Periplasmic chaperone C-domain
PAJ_0869	SSF49401	Bacterial adhesins
PAJ_0871	SSF51905	FAD/NAD(P)-binding domain
PAJ_0872	SSF46689	Homeodomain-like
PAJ_0873	SSF46689	Homeodomain-like
PAJ_0874	SSF56954	Outer membrane efflux proteins (OEP)
PAJ_0875	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
PAJ_0875	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
PAJ_0875	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
PAJ_0876	SSF111369	HlyD-like secretion proteins
PAJ_0877	SSF103473	MFS general substrate transporter
PAJ_0878	SSF101478	ADP-ribosylglycohydrolase
PAJ_0879	SSF53613	Ribokinase-like
PAJ_0880	SSF46785	"Winged helix" DNA-binding domain
PAJ_0880	SSF64288	Chorismate lyase-like
PAJ_0881	SSF103473	MFS general substrate transporter
PAJ_0883	SSF55729	Acyl-CoA N-acyltransferases (Nat)
PAJ_0884	SSF56281	Metallo-hydrolase/oxidoreductase
PAJ_0885	SSF141986	LD-carboxypeptidase A C-terminal domain-like
PAJ_0885	SSF52317	Class I glutamine amidotransferase-like
PAJ_0886	SSF53955	Lysozyme-like
PAJ_0887	SSF100950	NagB/RpiA/CoA transferase-like
PAJ_0887	SSF46689	Homeodomain-like
PAJ_0888	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
PAJ_0889	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
PAJ_0889	SSF52922	TK C-terminal domain-like
PAJ_0890	SSF53067	Actin-like ATPase domain
PAJ_0891	SSF50182	Sm-like ribonucleoproteins
PAJ_0891	SSF82689	Mechanosensitive channel protein MscS (YggB), C-terminal domain
PAJ_0891	SSF82861	Mechanosensitive channel protein MscS (YggB), transmembrane region
PAJ_0892	SSF141371	PilZ domain-like
PAJ_0894	SSF48208	Six-hairpin glycosidases
PAJ_0895	SSF51735	NAD(P)-binding Rossmann-fold domains
PAJ_0896	SSF89550	PHP domain-like
PAJ_0897	SSF89155	TorD-like
PAJ_0898	SSF89796	CoA-transferase family III (CaiB/BaiF)
PAJ_0899	SSF103481	Multidrug resistance efflux transporter EmrE
PAJ_0900	SSF52317	Class I glutamine amidotransferase-like
PAJ_0901	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
PAJ_0902	SSF53720	ALDH-like
PAJ_0903	SSF51182	RmlC-like cupins
PAJ_0904	SSF54427	NTF2-like
PAJ_0904	SSF88697	PUA domain-like
PAJ_0905	SSF53474	alpha/beta-Hydrolases
PAJ_0906	SSF51445	(Trans)glycosidases
PAJ_0907	SSF51261	Duplicated hybrid motif
PAJ_0907	SSF55604	Glucose permease domain IIB
PAJ_0908	SSF50151	SacY-like RNA-binding domain
PAJ_0908	SSF63520	PTS-regulatory domain, PRD
PAJ_0909	SSF46785	"Winged helix" DNA-binding domain
PAJ_0909	SSF53850	Periplasmic binding protein-like II
PAJ_0912	SSF51395	FMN-linked oxidoreductases
PAJ_0913	SSF55729	Acyl-CoA N-acyltransferases (Nat)
PAJ_0914	SSF56349	DNA breaking-rejoining enzymes
PAJ_0915	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
PAJ_0916	SSF55729	Acyl-CoA N-acyltransferases (Nat)
PAJ_0918	SSF103473	MFS general substrate transporter
PAJ_0919	SSF51556	Metallo-dependent hydrolases
PAJ_0920	SSF52317	Class I glutamine amidotransferase-like
PAJ_0921	SSF51569	Aldolase
PAJ_0922	SSF56935	Porins
PAJ_0923	SSF46689	Homeodomain-like
PAJ_0923	SSF51182	RmlC-like cupins
PAJ_0924	SSF52016	LeuD/IlvD-like
PAJ_0925	SSF75304	Amidase signature (AS) enzymes
PAJ_0926	SSF46689	Homeodomain-like
PAJ_0926	SSF48498	Tetracyclin repressor-like, C-terminal domain
PAJ_0927	SSF47413	lambda repressor-like DNA-binding domains
PAJ_0927	SSF51182	RmlC-like cupins
PAJ_0931	SSF51004	C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
PAJ_0933	SSF52141	Uracil-DNA glycosylase-like
PAJ_0934	SSF52467	DHS-like NAD/FAD-binding domain
PAJ_0935	SSF51395	FMN-linked oxidoreductases
PAJ_0936	SSF55729	Acyl-CoA N-acyltransferases (Nat)
PAJ_0937	SSF54506	Diaminopimelate epimerase-like
PAJ_0938	SSF55729	Acyl-CoA N-acyltransferases (Nat)
PAJ_0939	SSF47413	lambda repressor-like DNA-binding domains
PAJ_0939	SSF51182	RmlC-like cupins
PAJ_0940	SSF55729	Acyl-CoA N-acyltransferases (Nat)
PAJ_0941	SSF49401	Bacterial adhesins
PAJ_0942	SSF49401	Bacterial adhesins
PAJ_0943	SSF49401	Bacterial adhesins
PAJ_0944	SSF141729	FimD N-terminal domain-like
PAJ_0945	SSF49354	PapD-like
PAJ_0945	SSF49584	Periplasmic chaperone C-domain
PAJ_0946	SSF49401	Bacterial adhesins
PAJ_0947	SSF49401	Bacterial adhesins
PAJ_0948	SSF141868	EAL domain-like
PAJ_0950	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
PAJ_0951	SSF103515	Autotransporter
PAJ_0951	SSF51126	Pectin lyase-like
PAJ_0952	SSF46785	"Winged helix" DNA-binding domain
PAJ_0952	SSF53850	Periplasmic binding protein-like II
PAJ_0953	SSF103481	Multidrug resistance efflux transporter EmrE
PAJ_0955	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
PAJ_0956	SSF101874	YceI-like
PAJ_0958	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
PAJ_0958	SSF88946	Sigma2 domain of RNA polymerase sigma factors
PAJ_0959	SSF48452	TPR-like
PAJ_0960	SSF81342	Transmembrane di-heme cytochromes
PAJ_0961	SSF51735	NAD(P)-binding Rossmann-fold domains
PAJ_0961	SSF52283	Formate/glycerate dehydrogenase catalytic domain-like
PAJ_0964	SSF53927	Cytidine deaminase-like
PAJ_0967	SSF51726	UROD/MetE-like
PAJ_0968	SSF52833	Thioredoxin-like
PAJ_0969	SSF46785	"Winged helix" DNA-binding domain
PAJ_0970	SSF52507	Homo-oligomeric flavin-containing Cys decarboxylases, HFCD
PAJ_0971	SSF143968	UbiD C-terminal domain-like
PAJ_0971	SSF50475	FMN-binding split barrel
PAJ_0973	SSF103473	MFS general substrate transporter
PAJ_0974	SSF103473	MFS general substrate transporter
PAJ_0975	SSF51658	Xylose isomerase-like
PAJ_0976	SSF51735	NAD(P)-binding Rossmann-fold domains
PAJ_0976	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
PAJ_0977	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
PAJ_0978	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
PAJ_0979	SSF55729	Acyl-CoA N-acyltransferases (Nat)
PAJ_0980	SSF161093	MgtE membrane domain-like
PAJ_0980	SSF54631	CBS-domain pair
PAJ_0982	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_0983	SSF53098	Ribonuclease H-like
PAJ_0984	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_0984	SSF81271	TGS-like
PAJ_0985	SSF53178	Peptidyl-tRNA hydrolase-like
PAJ_0987	SSF55073	Nucleotide cyclase
PAJ_0988	SSF53271	PRTase-like
PAJ_0989	SSF54211	Ribosomal protein S5 domain 2-like
PAJ_0989	SSF55060	GHMP Kinase, C-terminal domain
PAJ_0990	SSF89392	Prokaryotic lipoproteins and lipoprotein localization factors
PAJ_0991	SSF51735	NAD(P)-binding Rossmann-fold domains
PAJ_0991	SSF69075	Glutamyl tRNA-reductase dimerization domain
PAJ_0991	SSF69742	Glutamyl tRNA-reductase catalytic, N-terminal domain
PAJ_0992	SSF75620	Release factor
PAJ_0993	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
PAJ_0996	SSF51569	Aldolase
PAJ_0999	SSF140376	ChaB-like
PAJ_1001	SSF56112	Protein kinase-like (PK-like)
PAJ_1003	SSF81606	PP2C-like
PAJ_1004	SSF49879	SMAD/FHA domain
PAJ_1006	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_1007	SSF103088	OmpA-like
PAJ_1008	SSF52172	CheY-like
PAJ_1009	SSF53850	Periplasmic binding protein-like II
PAJ_1010	SSF161098	MetI-like
PAJ_1011	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_1012	SSF50022	ISP domain
PAJ_1012	SSF51905	FAD/NAD(P)-binding domain
PAJ_1012	SSF55124	Nitrite/Sulfite reductase N-terminal domain-like
PAJ_1012	SSF56014	Nitrite and sulphite reductase 4Fe-4S domain-like
PAJ_1013	SSF50692	ADC-like
PAJ_1013	SSF53706	Formate dehydrogenase/DMSO reductase, domains 1-3
PAJ_1014	SSF53790	Tetrapyrrole methylase
PAJ_1015	SSF100950	NagB/RpiA/CoA transferase-like
PAJ_1015	SSF46785	"Winged helix" DNA-binding domain
PAJ_1016	SSF51735	NAD(P)-binding Rossmann-fold domains
PAJ_1017	SSF53822	Periplasmic binding protein-like I
PAJ_1018	SSF141318	TM0957-like
PAJ_1019	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_1021	SSF51735	NAD(P)-binding Rossmann-fold domains
PAJ_1023	SSF56935	Porins
PAJ_1024	SSF53383	PLP-dependent transferases
PAJ_1025	SSF55729	Acyl-CoA N-acyltransferases (Nat)
PAJ_1026	SSF53720	ALDH-like
PAJ_1027	SSF55909	Pentein
PAJ_1028	SSF53187	Zn-dependent exopeptidases
PAJ_1030	SSF82771	GIY-YIG endonuclease
PAJ_1031	SSF103481	Multidrug resistance efflux transporter EmrE
PAJ_1032	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
PAJ_1033	SSF52402	Adenine nucleotide alpha hydrolases-like
PAJ_1034	SSF103473	MFS general substrate transporter
PAJ_1036	SSF118215	Proton glutamate symport protein
PAJ_1038	SSF56784	HAD-like
PAJ_1040	SSF56112	Protein kinase-like (PK-like)
PAJ_1043	SSF52954	Class II aaRS ABD-related
PAJ_1043	SSF55186	ThrRS/AlaRS common domain
PAJ_1043	SSF55681	Class II aaRS and biotin synthetases
PAJ_1043	SSF81271	TGS-like
PAJ_1044	SSF54364	Translation initiation factor IF3, N-terminal domain
PAJ_1044	SSF55200	Translation initiation factor IF3, C-terminal domain
PAJ_1045	SSF143034	L35p-like
PAJ_1046	SSF74731	Ribosomal protein L20
PAJ_1047	SSF46589	tRNA-binding arm
PAJ_1047	SSF55681	Class II aaRS and biotin synthetases
PAJ_1048	SSF46955	Putative DNA-binding domain
PAJ_1048	SSF50249	Nucleic acid-binding proteins
PAJ_1048	SSF54991	Anticodon-binding domain of PheRS
PAJ_1048	SSF55681	Class II aaRS and biotin synthetases
PAJ_1048	SSF56037	PheT/TilS domain
PAJ_1049	SSF47729	IHF-like DNA-binding proteins
PAJ_1050	SSF81345	ABC transporter involved in vitamin B12 uptake, BtuC
PAJ_1051	SSF52833	Thioredoxin-like
PAJ_1052	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_1053	SSF54001	Cysteine proteinases
PAJ_1054	SSF141868	EAL domain-like
PAJ_1056	SSF51569	Aldolase
PAJ_1058	SSF51621	Phosphoenolpyruvate/pyruvate domain
PAJ_1058	SSF52009	Phosphohistidine domain
PAJ_1058	SSF56059	Glutathione synthetase ATP-binding domain-like
PAJ_1060	SSF46548	alpha-helical ferredoxin
PAJ_1060	SSF55103	FAD-linked oxidases, C-terminal domain
PAJ_1060	SSF56176	FAD-binding/transporter-associated domain-like
PAJ_1061	SSF89360	HesB-like domain
PAJ_1062	SSF101960	Stabilizer of iron transporter SufD
PAJ_1063	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_1064	SSF101960	Stabilizer of iron transporter SufD
PAJ_1065	SSF53383	PLP-dependent transferases
PAJ_1066	SSF82649	SufE/NifU
PAJ_1067	SSF141523	L,D-transpeptidase catalytic domain-like
PAJ_1068	SSF58042	Outer membrane lipoprotein
PAJ_1069	SSF50800	PK beta-barrel domain-like
PAJ_1069	SSF51621	Phosphoenolpyruvate/pyruvate domain
PAJ_1069	SSF52935	PK C-terminal domain-like
PAJ_1071	SSF63380	Riboflavin synthase domain-like
PAJ_1073	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
PAJ_1075	SSF103473	MFS general substrate transporter
PAJ_1076	SSF46785	"Winged helix" DNA-binding domain
PAJ_1076	SSF53850	Periplasmic binding protein-like II
PAJ_1077	SSF47413	lambda repressor-like DNA-binding domains
PAJ_1077	SSF53822	Periplasmic binding protein-like I
PAJ_1078	SSF54001	Cysteine proteinases
PAJ_1079	SSF52833	Thioredoxin-like
PAJ_1080	SSF53098	Ribonuclease H-like
PAJ_1081	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
PAJ_1082	SSF51395	FMN-linked oxidoreductases
PAJ_1083	SSF46689	Homeodomain-like
PAJ_1083	SSF48498	Tetracyclin repressor-like, C-terminal domain
PAJ_1084	SSF51430	NAD(P)-linked oxidoreductase
PAJ_1085	SSF49329	Cu,Zn superoxide dismutase-like
PAJ_1088	SSF111369	HlyD-like secretion proteins
PAJ_1090	SSF46785	"Winged helix" DNA-binding domain
PAJ_1092	SSF53067	Actin-like ATPase domain
PAJ_1093	SSF141868	EAL domain-like
PAJ_1093	SSF54975	Acylphosphatase/BLUF domain-like
PAJ_1094	SSF51735	NAD(P)-binding Rossmann-fold domains
PAJ_1095	SSF51011	Glycosyl hydrolase domain
PAJ_1095	SSF51445	(Trans)glycosidases
PAJ_1095	SSF81296	E set domains
PAJ_1096	SSF51445	(Trans)glycosidases
PAJ_1097	SSF51445	(Trans)glycosidases
PAJ_1097	SSF81296	E set domains
PAJ_1098	SSF52317	Class I glutamine amidotransferase-like
PAJ_1098	SSF56634	Heme-dependent catalase-like
PAJ_1102	SSF52317	Class I glutamine amidotransferase-like
PAJ_1103	SSF56601	beta-lactamase/transpeptidase-like
PAJ_1104	SSF53850	Periplasmic binding protein-like II
PAJ_1105	SSF51306	LexA/Signal peptidase
PAJ_1106	SSF100879	Lesion bypass DNA polymerase (Y-family), little finger domain
PAJ_1106	SSF56672	DNA/RNA polymerases
PAJ_1107	SSF52317	Class I glutamine amidotransferase-like
PAJ_1108	SSF46689	Homeodomain-like
PAJ_1108	SSF48498	Tetracyclin repressor-like, C-terminal domain
PAJ_1110	SSF50182	Sm-like ribonucleoproteins
PAJ_1111	SSF50182	Sm-like ribonucleoproteins
PAJ_1112	SSF49472	Transthyretin (synonym: prealbumin)
PAJ_1113	SSF141488	YdhA-like
PAJ_1114	SSF50475	FMN-binding split barrel
PAJ_1115	SSF52374	Nucleotidylyl transferase
PAJ_1115	SSF55174	Alpha-L RNA-binding motif
PAJ_1116	SSF53613	Ribokinase-like
PAJ_1117	SSF47616	GST C-terminal domain-like
PAJ_1117	SSF52833	Thioredoxin-like
PAJ_1118	SSF103473	MFS general substrate transporter
PAJ_1119	SSF52317	Class I glutamine amidotransferase-like
PAJ_1120	SSF48150	DNA-glycosylase
PAJ_1124	SSF142019	Nqo1 FMN-binding domain-like
PAJ_1124	SSF46548	alpha-helical ferredoxin
PAJ_1125	SSF54862	4Fe-4S ferredoxins
PAJ_1128	SSF68989	Hemolysin expression modulating protein HHA
PAJ_1129	SSF53822	Periplasmic binding protein-like I
PAJ_1130	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_1133	SSF103190	Sensory domain-like
PAJ_1133	SSF55073	Nucleotide cyclase
PAJ_1135	SSF46894	C-terminal effector domain of the bipartite response regulators
PAJ_1138	SSF49354	PapD-like
PAJ_1138	SSF49584	Periplasmic chaperone C-domain
PAJ_1139	SSF47090	PGBD-like
PAJ_1139	SSF55846	N-acetylmuramoyl-L-alanine amidase-like
PAJ_1141	SSF46689	Homeodomain-like
PAJ_1142	SSF51735	NAD(P)-binding Rossmann-fold domains
PAJ_1143	SSF50182	Sm-like ribonucleoproteins
PAJ_1143	SSF82861	Mechanosensitive channel protein MscS (YggB), transmembrane region
PAJ_1145	SSF53474	alpha/beta-Hydrolases
PAJ_1146	SSF56281	Metallo-hydrolase/oxidoreductase
PAJ_1147	SSF46785	"Winged helix" DNA-binding domain
PAJ_1147	SSF54909	Dimeric alpha+beta barrel
PAJ_1148	SSF53383	PLP-dependent transferases
PAJ_1149	SSF56112	Protein kinase-like (PK-like)
PAJ_1150	SSF56784	HAD-like
PAJ_1151	SSF50249	Nucleic acid-binding proteins
PAJ_1153	SSF160904	Jann2411-like
PAJ_1154	SSF53474	alpha/beta-Hydrolases
PAJ_1155	SSF55120	Pseudouridine synthase
PAJ_1156	SSF46785	"Winged helix" DNA-binding domain
PAJ_1156	SSF53850	Periplasmic binding protein-like II
PAJ_1157	SSF51735	NAD(P)-binding Rossmann-fold domains
PAJ_1159	SSF50443	FucI/AraA C-terminal domain-like
PAJ_1159	SSF53743	FucI/AraA N-terminal and middle domains
PAJ_1160	SSF53067	Actin-like ATPase domain
PAJ_1161	SSF53822	Periplasmic binding protein-like I
PAJ_1162	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_1164	SSF46689	Homeodomain-like
PAJ_1164	SSF51215	Regulatory protein AraC
PAJ_1165	SSF51735	NAD(P)-binding Rossmann-fold domains
PAJ_1166	SSF51556	Metallo-dependent hydrolases
PAJ_1168	SSF51182	RmlC-like cupins
PAJ_1169	SSF48557	L-aspartase-like
PAJ_1170	SSF56596	Replication terminator protein (Tus)
PAJ_1171	SSF103473	MFS general substrate transporter
PAJ_1172	SSF53474	alpha/beta-Hydrolases
PAJ_1173	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
PAJ_1173	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
PAJ_1173	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
PAJ_1174	SSF111369	HlyD-like secretion proteins
PAJ_1175	SSF46689	Homeodomain-like
PAJ_1177	SSF53067	Actin-like ATPase domain
PAJ_1180	SSF47413	lambda repressor-like DNA-binding domains
PAJ_1180	SSF51182	RmlC-like cupins
PAJ_1181	SSF52499	Isochorismatase-like hydrolases
PAJ_1182	SSF56935	Porins
PAJ_1183	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
PAJ_1183	SSF51735	NAD(P)-binding Rossmann-fold domains
PAJ_1184	SSF51182	RmlC-like cupins
PAJ_1185	SSF110921	2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain
PAJ_1185	SSF51569	Aldolase
PAJ_1185	SSF89000	post-HMGL domain-like
PAJ_1186	SSF51556	Metallo-dependent hydrolases
PAJ_1187	SSF56281	Metallo-hydrolase/oxidoreductase
PAJ_1188	SSF48613	Heme oxygenase-like
PAJ_1190	SSF102114	Radical SAM enzymes
PAJ_1191	SSF63411	LuxS/MPP-like metallohydrolase
PAJ_1192	SSF101874	YceI-like
PAJ_1193	SSF53784	Phosphofructokinase
PAJ_1195	SSF51569	Aldolase
PAJ_1196	SSF55804	Phoshotransferase/anion transport protein
PAJ_1197	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_1199	SSF50952	Soluble quinoprotein glucose dehydrogenase
PAJ_1200	SSF51161	Trimeric LpxA-like enzymes
PAJ_1201	SSF56634	Heme-dependent catalase-like
PAJ_1202	SSF51658	Xylose isomerase-like
PAJ_1203	SSF53822	Periplasmic binding protein-like I
PAJ_1204	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_1206	SSF46689	Homeodomain-like
PAJ_1206	SSF53697	SIS domain
PAJ_1207	SSF53613	Ribokinase-like
PAJ_1208	SSF50129	GroES-like
PAJ_1208	SSF51735	NAD(P)-binding Rossmann-fold domains
PAJ_1209	SSF48317	Acid phosphatase/Vanadium-dependent haloperoxidase
PAJ_1210	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
PAJ_1211	SSF46894	C-terminal effector domain of the bipartite response regulators
PAJ_1211	SSF52172	CheY-like
PAJ_1213	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_1214	SSF51161	Trimeric LpxA-like enzymes
PAJ_1216	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
PAJ_1217	SSF46785	"Winged helix" DNA-binding domain
PAJ_1217	SSF53850	Periplasmic binding protein-like II
PAJ_1218	SSF51735	NAD(P)-binding Rossmann-fold domains
PAJ_1219	SSF46785	"Winged helix" DNA-binding domain
PAJ_1219	SSF53850	Periplasmic binding protein-like II
PAJ_1222	SSF53187	Zn-dependent exopeptidases
PAJ_1222	SSF55031	Bacterial exopeptidase dimerisation domain
PAJ_1223	SSF52833	Thioredoxin-like
PAJ_1226	SSF46785	"Winged helix" DNA-binding domain
PAJ_1229	SSF81321	Family A G protein-coupled receptor-like
PAJ_1230	SSF53927	Cytidine deaminase-like
PAJ_1231	SSF55729	Acyl-CoA N-acyltransferases (Nat)
PAJ_1232	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
PAJ_1234	SSF51395	FMN-linked oxidoreductases
PAJ_1235	SSF53649	Alkaline phosphatase-like
PAJ_1236	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
PAJ_1236	SSF88946	Sigma2 domain of RNA polymerase sigma factors
PAJ_1237	SSF161098	MetI-like
PAJ_1238	SSF160964	MalF N-terminal region-like
PAJ_1238	SSF161098	MetI-like
PAJ_1239	SSF53850	Periplasmic binding protein-like II
PAJ_1240	SSF50331	MOP-like
PAJ_1240	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_1241	SSF56935	Porins
PAJ_1243	SSF53474	alpha/beta-Hydrolases
PAJ_1244	SSF46689	Homeodomain-like
PAJ_1245	SSF51445	(Trans)glycosidases
PAJ_1246	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
PAJ_1247	SSF46894	C-terminal effector domain of the bipartite response regulators
PAJ_1247	SSF48452	TPR-like
PAJ_1247	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_1248	SSF103473	MFS general substrate transporter
PAJ_1249	SSF51445	(Trans)glycosidases
PAJ_1250	SSF50692	ADC-like
PAJ_1250	SSF53706	Formate dehydrogenase/DMSO reductase, domains 1-3
PAJ_1253	SSF53098	Ribonuclease H-like
PAJ_1254	SSF56349	DNA breaking-rejoining enzymes
PAJ_1257	SSF51445	(Trans)glycosidases
PAJ_1258	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_1258	SSF90123	ABC transporter transmembrane region
PAJ_1259	SSF111369	HlyD-like secretion proteins
PAJ_1260	SSF56954	Outer membrane efflux proteins (OEP)
PAJ_1261	SSF54001	Cysteine proteinases
PAJ_1262	SSF55811	Nudix
PAJ_1263	SSF53850	Periplasmic binding protein-like II
PAJ_1264	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_1264	SSF90002	Hypothetical protein YjiA, C-terminal domain
PAJ_1265	SSF51735	NAD(P)-binding Rossmann-fold domains
PAJ_1266	SSF51735	NAD(P)-binding Rossmann-fold domains
PAJ_1267	SSF103473	MFS general substrate transporter
PAJ_1268	SSF88713	Glycoside hydrolase/deacetylase
PAJ_1269	SSF75304	Amidase signature (AS) enzymes
PAJ_1270	SSF46785	"Winged helix" DNA-binding domain
PAJ_1270	SSF48008	GntR ligand-binding domain-like
PAJ_1272	SSF55298	YjgF-like
PAJ_1273	SSF51905	FAD/NAD(P)-binding domain
PAJ_1274	SSF53720	ALDH-like
PAJ_1275	SSF51419	PLP-binding barrel
PAJ_1276	SSF46785	"Winged helix" DNA-binding domain
PAJ_1276	SSF53850	Periplasmic binding protein-like II
PAJ_1277	SSF82153	FAS1 domain
PAJ_1278	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
PAJ_1278	SSF88946	Sigma2 domain of RNA polymerase sigma factors
PAJ_1280	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
PAJ_1283	SSF47413	lambda repressor-like DNA-binding domains
PAJ_1284	SSF55729	Acyl-CoA N-acyltransferases (Nat)
PAJ_1285	SSF51445	(Trans)glycosidases
PAJ_1285	SSF52279	Beta-D-glucan exohydrolase, C-terminal domain
PAJ_1286	SSF103473	MFS general substrate transporter
PAJ_1287	SSF55729	Acyl-CoA N-acyltransferases (Nat)
PAJ_1288	SSF46894	C-terminal effector domain of the bipartite response regulators
PAJ_1288	SSF75516	Pheromone-binding domain of LuxR-like quorum-sensing transcription factors
PAJ_1289	SSF51735	NAD(P)-binding Rossmann-fold domains
PAJ_1290	SSF56601	beta-lactamase/transpeptidase-like
PAJ_1291	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
PAJ_1292	SSF51905	FAD/NAD(P)-binding domain
PAJ_1293	SSF55486	Metalloproteases ("zincins"), catalytic domain
PAJ_1294	SSF51735	NAD(P)-binding Rossmann-fold domains
PAJ_1295	SSF47741	CO dehydrogenase ISP C-domain like
PAJ_1295	SSF54292	2Fe-2S ferredoxin-like
PAJ_1295	SSF55447	CO dehydrogenase flavoprotein C-terminal domain-like
PAJ_1295	SSF56176	FAD-binding/transporter-associated domain-like
PAJ_1296	SSF51338	Composite domain of metallo-dependent hydrolases
PAJ_1296	SSF51556	Metallo-dependent hydrolases
PAJ_1297	SSF51735	NAD(P)-binding Rossmann-fold domains
PAJ_1298	SSF103481	Multidrug resistance efflux transporter EmrE
PAJ_1301	SSF103473	MFS general substrate transporter
PAJ_1302	SSF161098	MetI-like
PAJ_1303	SSF53850	Periplasmic binding protein-like II
PAJ_1304	SSF161098	MetI-like
PAJ_1306	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_1306	SSF54631	CBS-domain pair
PAJ_1307	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_1308	SSF53067	Actin-like ATPase domain
PAJ_1309	SSF46785	"Winged helix" DNA-binding domain
PAJ_1309	SSF53850	Periplasmic binding protein-like II
PAJ_1310	SSF103473	MFS general substrate transporter
PAJ_1311	SSF81342	Transmembrane di-heme cytochromes
PAJ_1312	SSF103473	MFS general substrate transporter
PAJ_1313	SSF57716	Glucocorticoid receptor-like (DNA-binding domain)
PAJ_1314	SSF53850	Periplasmic binding protein-like II
PAJ_1315	SSF53187	Zn-dependent exopeptidases
PAJ_1315	SSF55031	Bacterial exopeptidase dimerisation domain
PAJ_1316	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
PAJ_1317	SSF53474	alpha/beta-Hydrolases
PAJ_1319	SSF103473	MFS general substrate transporter
PAJ_1320	SSF46785	"Winged helix" DNA-binding domain
PAJ_1320	SSF53850	Periplasmic binding protein-like II
PAJ_1321	SSF160443	SMR domain-like
PAJ_1322	SSF46785	"Winged helix" DNA-binding domain
PAJ_1322	SSF51206	cAMP-binding domain-like
PAJ_1323	SSF52402	Adenine nucleotide alpha hydrolases-like
PAJ_1324	SSF52467	DHS-like NAD/FAD-binding domain
PAJ_1325	SSF51735	NAD(P)-binding Rossmann-fold domains
PAJ_1325	SSF52283	Formate/glycerate dehydrogenase catalytic domain-like
PAJ_1326	SSF159871	YdgH-like
PAJ_1328	SSF52172	CheY-like
PAJ_1329	SSF47384	Homodimeric domain of signal transducing histidine kinase
PAJ_1329	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
PAJ_1330	SSF55486	Metalloproteases ("zincins"), catalytic domain
PAJ_1332	SSF50494	Trypsin-like serine proteases
PAJ_1333	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_1334	SSF52218	Flavoproteins
PAJ_1337	SSF51735	NAD(P)-binding Rossmann-fold domains
PAJ_1337	SSF52283	Formate/glycerate dehydrogenase catalytic domain-like
PAJ_1340	SSF52402	Adenine nucleotide alpha hydrolases-like
PAJ_1341	SSF143865	CorA soluble domain-like
PAJ_1341	SSF144083	Magnesium transport protein CorA, transmembrane region
PAJ_1342	SSF53850	Periplasmic binding protein-like II
PAJ_1343	SSF53187	Zn-dependent exopeptidases
PAJ_1344	SSF51604	Enolase C-terminal domain-like
PAJ_1344	SSF54826	Enolase N-terminal domain-like
PAJ_1345	SSF52833	Thioredoxin-like
PAJ_1346	SSF46689	Homeodomain-like
PAJ_1346	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_1346	SSF55021	ACT-like
PAJ_1346	SSF55785	PYP-like sensor domain (PAS domain)
PAJ_1353	SSF46689	Homeodomain-like
PAJ_1353	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_1354	SSF53850	Periplasmic binding protein-like II
PAJ_1355	SSF161098	MetI-like
PAJ_1356	SSF161098	MetI-like
PAJ_1357	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_1358	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_1359	SSF51735	NAD(P)-binding Rossmann-fold domains
PAJ_1360	SSF69118	AhpD-like
PAJ_1361	SSF53850	Periplasmic binding protein-like II
PAJ_1362	SSF55604	Glucose permease domain IIB
PAJ_1363	SSF50692	ADC-like
PAJ_1363	SSF53706	Formate dehydrogenase/DMSO reductase, domains 1-3
PAJ_1364	SSF50249	Nucleic acid-binding proteins
PAJ_1367	SSF141868	EAL domain-like
PAJ_1367	SSF55073	Nucleotide cyclase
PAJ_1367	SSF55785	PYP-like sensor domain (PAS domain)
PAJ_1368	SSF52096	ClpP/crotonase
PAJ_1369	SSF53639	AraD/HMP-PK domain-like
PAJ_1371	SSF55159	eIF1-like
PAJ_1372	SSF51366	Ribulose-phoshate binding barrel
PAJ_1373	SSF81901	HCP-like
PAJ_1375	SSF48317	Acid phosphatase/Vanadium-dependent haloperoxidase
PAJ_1376	SSF142695	RibA-like
PAJ_1377	SSF52016	LeuD/IlvD-like
PAJ_1377	SSF53732	Aconitase iron-sulfur domain
PAJ_1378	SSF46785	"Winged helix" DNA-binding domain
PAJ_1378	SSF53850	Periplasmic binding protein-like II
PAJ_1379	SSF56712	Prokaryotic type I DNA topoisomerase
PAJ_1379	SSF57783	Zinc beta-ribbon
PAJ_1381	SSF52096	ClpP/crotonase
PAJ_1382	SSF51735	NAD(P)-binding Rossmann-fold domains
PAJ_1383	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_1385	SSF55120	Pseudouridine synthase
PAJ_1385	SSF55174	Alpha-L RNA-binding motif
PAJ_1386	SSF50494	Trypsin-like serine proteases
PAJ_1387	SSF55821	YrdC/RibB
PAJ_1388	SSF89550	PHP domain-like
PAJ_1389	SSF56322	ADC synthase
PAJ_1390	SSF47648	Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain
PAJ_1390	SSF52418	Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain
PAJ_1391	SSF51366	Ribulose-phoshate binding barrel
PAJ_1392	SSF53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes
PAJ_1393	SSF51366	Ribulose-phoshate binding barrel
PAJ_1395	SSF56925	OMPA-like
PAJ_1399	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
PAJ_1400	SSF74653	TolA/TonB C-terminal domain
PAJ_1401	SSF54909	Dimeric alpha+beta barrel
PAJ_1402	SSF56024	Phospholipase D/nuclease
PAJ_1403	SSF102816	Putative dsDNA mimic
PAJ_1404	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_1405	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_1406	SSF161098	MetI-like
PAJ_1407	SSF161098	MetI-like
PAJ_1408	SSF53850	Periplasmic binding protein-like II
PAJ_1409	SSF53850	Periplasmic binding protein-like II
PAJ_1411	SSF53720	ALDH-like
PAJ_1411	SSF56796	Dehydroquinate synthase-like
PAJ_1412	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_1412	SSF57716	Glucocorticoid receptor-like (DNA-binding domain)
PAJ_1413	SSF81273	H-NS histone-like proteins
PAJ_1414	SSF51735	NAD(P)-binding Rossmann-fold domains
PAJ_1415	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
PAJ_1415	SSF51735	NAD(P)-binding Rossmann-fold domains
PAJ_1415	SSF52413	UDP-glucose/GDP-mannose dehydrogenase C-terminal domain
PAJ_1416	SSF53448	Nucleotide-diphospho-sugar transferases
PAJ_1417	SSF52172	CheY-like
PAJ_1418	SSF52151	FabD/lysophospholipase-like
PAJ_1419	SSF103642	Sec-C motif
PAJ_1419	SSF54427	NTF2-like
PAJ_1420	SSF53328	Formyltransferase
PAJ_1420	SSF55021	ACT-like
PAJ_1422	SSF56219	DNase I-like
PAJ_1424	SSF56712	Prokaryotic type I DNA topoisomerase
PAJ_1425	SSF55469	FMN-dependent nitroreductase-like
PAJ_1426	SSF52096	ClpP/crotonase
PAJ_1427	SSF53774	Glutaminase/Asparaginase
PAJ_1428	SSF52499	Isochorismatase-like hydrolases
PAJ_1430	SSF51316	Mss4-like
PAJ_1431	SSF51735	NAD(P)-binding Rossmann-fold domains
PAJ_1431	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
PAJ_1432	SSF74650	Galactose mutarotase-like
PAJ_1433	SSF51430	NAD(P)-linked oxidoreductase
PAJ_1434	SSF56935	Porins
PAJ_1435	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_1437	SSF116726	TrkA C-terminal domain-like
PAJ_1437	SSF56176	FAD-binding/transporter-associated domain-like
PAJ_1440	SSF103473	MFS general substrate transporter
PAJ_1441	SSF50621	Alanine racemase C-terminal domain-like
PAJ_1441	SSF51419	PLP-binding barrel
PAJ_1442	SSF51905	FAD/NAD(P)-binding domain
PAJ_1442	SSF54373	FAD-linked reductases, C-terminal domain
PAJ_1444	SSF46785	"Winged helix" DNA-binding domain
PAJ_1444	SSF48008	GntR ligand-binding domain-like
PAJ_1445	SSF158442	DsbB-like
PAJ_1447	SSF56529	FAH
PAJ_1448	SSF160191	YcgL-like
PAJ_1449	SSF63848	Cell-division inhibitor MinC, C-terminal domain
PAJ_1450	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_1451	SSF55229	Cell division protein MinE topological specificity domain
PAJ_1452	SSF47819	HRDC-like
PAJ_1452	SSF53098	Ribonuclease H-like
PAJ_1453	SSF56801	Acetyl-CoA synthetase-like
PAJ_1455	SSF53067	Actin-like ATPase domain
PAJ_1456	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_1457	SSF55298	YjgF-like
PAJ_1459	SSF56322	ADC synthase
PAJ_1460	SSF55811	Nudix
PAJ_1461	SSF143548	Serine metabolism enzymes domain
PAJ_1462	SSF141868	EAL domain-like
PAJ_1463	SSF54631	CBS-domain pair
PAJ_1463	SSF56176	FAD-binding/transporter-associated domain-like
PAJ_1464	SSF52728	PTS IIb component
PAJ_1464	SSF53062	PTS system fructose IIA component-like
PAJ_1468	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
PAJ_1471	SSF46785	"Winged helix" DNA-binding domain
PAJ_1471	SSF55781	GAF domain-like
PAJ_1472	SSF103473	MFS general substrate transporter
PAJ_1474	SSF50156	PDZ domain-like
PAJ_1474	SSF52096	ClpP/crotonase
PAJ_1475	SSF48657	FinO-like
PAJ_1476	SSF55781	GAF domain-like
PAJ_1477	SSF48695	Multiheme cytochromes
PAJ_1479	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
PAJ_1480	SSF103473	MFS general substrate transporter
PAJ_1482	SSF46689	Homeodomain-like
PAJ_1482	SSF48498	Tetracyclin repressor-like, C-terminal domain
PAJ_1483	SSF53720	ALDH-like
PAJ_1484	SSF51905	FAD/NAD(P)-binding domain
PAJ_1484	SSF54373	FAD-linked reductases, C-terminal domain
PAJ_1485	SSF103481	Multidrug resistance efflux transporter EmrE
PAJ_1486	SSF103481	Multidrug resistance efflux transporter EmrE
PAJ_1487	SSF46785	"Winged helix" DNA-binding domain
PAJ_1487	SSF53850	Periplasmic binding protein-like II
PAJ_1488	SSF51735	NAD(P)-binding Rossmann-fold domains
PAJ_1490	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
PAJ_1491	SSF55785	PYP-like sensor domain (PAS domain)
PAJ_1492	SSF51735	NAD(P)-binding Rossmann-fold domains
PAJ_1492	SSF56327	LDH C-terminal domain-like
PAJ_1493	SSF55604	Glucose permease domain IIB
PAJ_1494	SSF64288	Chorismate lyase-like
PAJ_1495	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
PAJ_1498	SSF81296	E set domains
PAJ_1499	SSF46575	DNA polymerase III theta subunit-like
PAJ_1500	SSF53098	Ribonuclease H-like
PAJ_1501	SSF50993	Peptidase/esterase 'gauge' domain
PAJ_1501	SSF53474	alpha/beta-Hydrolases
PAJ_1502	SSF158682	TerB-like
PAJ_1503	SSF51246	Rudiment single hybrid motif
PAJ_1503	SSF52440	PreATP-grasp domain
PAJ_1503	SSF56059	Glutathione synthetase ATP-binding domain-like
PAJ_1504	SSF51569	Aldolase
PAJ_1505	SSF51735	NAD(P)-binding Rossmann-fold domains
PAJ_1505	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
PAJ_1506	SSF46689	Homeodomain-like
PAJ_1506	SSF53697	SIS domain
PAJ_1507	SSF50800	PK beta-barrel domain-like
PAJ_1507	SSF51621	Phosphoenolpyruvate/pyruvate domain
PAJ_1507	SSF52935	PK C-terminal domain-like
PAJ_1508	SSF103473	MFS general substrate transporter
PAJ_1510	SSF51261	Duplicated hybrid motif
PAJ_1511	SSF53807	"Helical backbone" metal receptor
PAJ_1512	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_1513	SSF81345	ABC transporter involved in vitamin B12 uptake, BtuC
PAJ_1514	SSF46785	"Winged helix" DNA-binding domain
PAJ_1514	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_1515	SSF46929	DNA helicase RuvA subunit, C-terminal domain
PAJ_1515	SSF47781	RuvA domain 2-like
PAJ_1515	SSF50249	Nucleic acid-binding proteins
PAJ_1516	SSF53098	Ribonuclease H-like
PAJ_1517	SSF75625	YebC-like
PAJ_1519	SSF55811	Nudix
PAJ_1520	SSF50249	Nucleic acid-binding proteins
PAJ_1520	SSF55261	GAD domain-like
PAJ_1520	SSF55681	Class II aaRS and biotin synthetases
PAJ_1521	SSF117396	TM1631-like
PAJ_1522	SSF161084	MAPEG domain-like
PAJ_1523	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
PAJ_1524	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
PAJ_1526	SSF56796	Dehydroquinate synthase-like
PAJ_1528	SSF110395	CutC-like
PAJ_1529	SSF53383	PLP-dependent transferases
PAJ_1530	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
PAJ_1531	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
PAJ_1531	SSF52374	Nucleotidylyl transferase
PAJ_1531	SSF55190	Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain
PAJ_1532	SSF81338	Aquaporin-like
PAJ_1535	SSF160544	EscU C-terminal domain-like
PAJ_1536	SSF75708	Chemotaxis phosphatase CheZ
PAJ_1537	SSF52172	CheY-like
PAJ_1538	SSF52172	CheY-like
PAJ_1538	SSF52738	Methylesterase CheB, C-terminal domain
PAJ_1539	SSF47757	Chemotaxis receptor methyltransferase CheR, N-terminal domain
PAJ_1539	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
PAJ_1540	SSF47170	Aspartate receptor, ligand-binding domain
PAJ_1540	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
PAJ_1541	SSF47170	Aspartate receptor, ligand-binding domain
PAJ_1541	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
PAJ_1542	SSF50341	CheW-like
PAJ_1543	SSF47226	Histidine-containing phosphotransfer domain, HPT domain
PAJ_1543	SSF47384	Homodimeric domain of signal transducing histidine kinase
PAJ_1543	SSF50341	CheW-like
PAJ_1543	SSF55052	CheY-binding domain of CheA
PAJ_1543	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
PAJ_1544	SSF103088	OmpA-like
PAJ_1546	SSF160930	FlhC-like
PAJ_1547	SSF63592	Flagellar transcriptional activator FlhD
PAJ_1548	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
PAJ_1549	SSF56784	HAD-like
PAJ_1550	SSF46894	C-terminal effector domain of the bipartite response regulators
PAJ_1550	SSF52172	CheY-like
PAJ_1551	SSF47384	Homodimeric domain of signal transducing histidine kinase
PAJ_1551	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
PAJ_1552	SSF55068	Peptide methionine sulfoxide reductase
PAJ_1553	SSF53850	Periplasmic binding protein-like II
PAJ_1554	SSF46689	Homeodomain-like
PAJ_1554	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_1554	SSF53850	Periplasmic binding protein-like II
PAJ_1555	SSF51679	Bacterial luciferase-like
PAJ_1556	SSF51905	FAD/NAD(P)-binding domain
PAJ_1557	SSF51679	Bacterial luciferase-like
PAJ_1559	SSF103473	MFS general substrate transporter
PAJ_1560	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
PAJ_1560	SSF56645	Acyl-CoA dehydrogenase NM domain-like
PAJ_1561	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_1562	SSF54909	Dimeric alpha+beta barrel
PAJ_1566	SSF47598	Ribbon-helix-helix
PAJ_1566	SSF51730	FAD-linked oxidoreductase
PAJ_1566	SSF53720	ALDH-like
PAJ_1566	SSF81935	N-terminal domain of bifunctional PutA protein
PAJ_1567	SSF103501	Respiratory nitrate reductase 1 gamma chain
PAJ_1569	SSF55811	Nudix
PAJ_1571	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_1572	SSF161098	MetI-like
PAJ_1573	SSF53850	Periplasmic binding protein-like II
PAJ_1574	SSF53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes
PAJ_1576	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
PAJ_1576	SSF88946	Sigma2 domain of RNA polymerase sigma factors
PAJ_1578	SSF53448	Nucleotide-diphospho-sugar transferases
PAJ_1579	SSF51182	RmlC-like cupins
PAJ_1580	SSF51735	NAD(P)-binding Rossmann-fold domains
PAJ_1583	SSF56801	Acetyl-CoA synthetase-like
PAJ_1584	SSF56801	Acetyl-CoA synthetase-like
PAJ_1585	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
PAJ_1585	SSF52922	TK C-terminal domain-like
PAJ_1586	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
PAJ_1587	SSF51735	NAD(P)-binding Rossmann-fold domains
PAJ_1588	SSF51735	NAD(P)-binding Rossmann-fold domains
PAJ_1589	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
PAJ_1590	SSF51161	Trimeric LpxA-like enzymes
PAJ_1591	SSF53383	PLP-dependent transferases
PAJ_1592	SSF53448	Nucleotide-diphospho-sugar transferases
PAJ_1593	SSF53448	Nucleotide-diphospho-sugar transferases
PAJ_1594	SSF64518	Phase 1 flagellin
PAJ_1595	SSF64518	Phase 1 flagellin
PAJ_1596	SSF64518	Phase 1 flagellin
PAJ_1597	SSF64518	Phase 1 flagellin
PAJ_1599	SSF101116	Flagellar export chaperone FliS
PAJ_1601	SSF51011	Glycosyl hydrolase domain
PAJ_1601	SSF51445	(Trans)glycosidases
PAJ_1604	SSF54857	DNA damage-inducible protein DinI
PAJ_1607	SSF48029	FliG
PAJ_1610	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_1614	SSF101801	Surface presentation of antigens (SPOA)
PAJ_1614	SSF103039	CheC-like
PAJ_1615	SSF101801	Surface presentation of antigens (SPOA)
PAJ_1620	SSF46894	C-terminal effector domain of the bipartite response regulators
PAJ_1621	SSF47170	Aspartate receptor, ligand-binding domain
PAJ_1621	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
PAJ_1623	SSF56784	HAD-like
PAJ_1624	SSF53448	Nucleotide-diphospho-sugar transferases
PAJ_1627	SSF52980	Restriction endonuclease-like
PAJ_1628	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
PAJ_1629	SSF47170	Aspartate receptor, ligand-binding domain
PAJ_1629	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
PAJ_1630	SSF109604	HD-domain/PDEase-like
PAJ_1632	SSF55486	Metalloproteases ("zincins"), catalytic domain
PAJ_1633	SSF89447	AbrB/MazE/MraZ-like
PAJ_1634	SSF53800	Chelatase
PAJ_1635	SSF103473	MFS general substrate transporter
PAJ_1636	SSF81345	ABC transporter involved in vitamin B12 uptake, BtuC
PAJ_1637	SSF53807	"Helical backbone" metal receptor
PAJ_1638	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_1639	SSF49764	HSP20-like chaperones
PAJ_1641	SSF55804	Phoshotransferase/anion transport protein
PAJ_1641	SSF63520	PTS-regulatory domain, PRD
PAJ_1642	SSF74650	Galactose mutarotase-like
PAJ_1642	SSF88688	Families 57/38 glycoside transferase middle domain
PAJ_1642	SSF88713	Glycoside hydrolase/deacetylase
PAJ_1644	SSF52794	PTS system IIB component-like
PAJ_1645	SSF55804	Phoshotransferase/anion transport protein
PAJ_1646	SSF69304	Tricorn protease N-terminal domain
PAJ_1649	SSF69255	gp5 N-terminal domain-like
PAJ_1649	SSF69279	Phage tail proteins
PAJ_1649	SSF69349	Phage fibre proteins
PAJ_1650	SSF69279	Phage tail proteins
PAJ_1652	SSF141571	Pentapeptide repeat-like
PAJ_1653	SSF141571	Pentapeptide repeat-like
PAJ_1654	SSF69255	gp5 N-terminal domain-like
PAJ_1654	SSF69279	Phage tail proteins
PAJ_1654	SSF69349	Phage fibre proteins
PAJ_1655	SSF56112	Protein kinase-like (PK-like)
PAJ_1656	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_1656	SSF81923	Double Clp-N motif
PAJ_1659	SSF160719	gpW/gp25-like
PAJ_1660	SSF144059	ImpE-like
PAJ_1662	SSF81606	PP2C-like
PAJ_1663	SSF49879	SMAD/FHA domain
PAJ_1664	SSF47090	PGBD-like
PAJ_1665	SSF141452	Hcp1-like
PAJ_1670	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_1671	SSF103088	OmpA-like
PAJ_1676	SSF53167	Purine and uridine phosphorylases
PAJ_1677	SSF57997	Tropomyosin
PAJ_1679	SSF46894	C-terminal effector domain of the bipartite response regulators
PAJ_1679	SSF52172	CheY-like
PAJ_1680	SSF53613	Ribokinase-like
PAJ_1681	SSF51569	Aldolase
PAJ_1682	SSF51182	RmlC-like cupins
PAJ_1683	SSF53822	Periplasmic binding protein-like I
PAJ_1685	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_1686	SSF158472	HAMP domain-like
PAJ_1686	SSF47384	Homodimeric domain of signal transducing histidine kinase
PAJ_1686	SSF52172	CheY-like
PAJ_1686	SSF55785	PYP-like sensor domain (PAS domain)
PAJ_1686	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
PAJ_1687	SSF161098	MetI-like
PAJ_1688	SSF161098	MetI-like
PAJ_1689	SSF53850	Periplasmic binding protein-like II
PAJ_1690	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_1691	SSF56281	Metallo-hydrolase/oxidoreductase
PAJ_1692	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_1693	SSF51338	Composite domain of metallo-dependent hydrolases
PAJ_1693	SSF51556	Metallo-dependent hydrolases
PAJ_1694	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_1695	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_1699	SSF159709	PhnH-like
PAJ_1701	SSF46785	"Winged helix" DNA-binding domain
PAJ_1701	SSF64288	Chorismate lyase-like
PAJ_1702	SSF52499	Isochorismatase-like hydrolases
PAJ_1704	SSF48317	Acid phosphatase/Vanadium-dependent haloperoxidase
PAJ_1704	SSF51126	Pectin lyase-like
PAJ_1705	SSF46785	"Winged helix" DNA-binding domain
PAJ_1705	SSF54909	Dimeric alpha+beta barrel
PAJ_1706	SSF53383	PLP-dependent transferases
PAJ_1707	SSF53187	Zn-dependent exopeptidases
PAJ_1707	SSF55031	Bacterial exopeptidase dimerisation domain
PAJ_1708	SSF51735	NAD(P)-binding Rossmann-fold domains
PAJ_1708	SSF52283	Formate/glycerate dehydrogenase catalytic domain-like
PAJ_1709	SSF55729	Acyl-CoA N-acyltransferases (Nat)
PAJ_1710	SSF51905	FAD/NAD(P)-binding domain
PAJ_1711	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_1712	SSF161098	MetI-like
PAJ_1713	SSF161098	MetI-like
PAJ_1714	SSF53850	Periplasmic binding protein-like II
PAJ_1715	SSF51905	FAD/NAD(P)-binding domain
PAJ_1716	SSF56784	HAD-like
PAJ_1717	SSF53720	ALDH-like
PAJ_1718	SSF53720	ALDH-like
PAJ_1719	SSF53850	Periplasmic binding protein-like II
PAJ_1720	SSF46785	"Winged helix" DNA-binding domain
PAJ_1720	SSF53850	Periplasmic binding protein-like II
PAJ_1722	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_1723	SSF53822	Periplasmic binding protein-like I
PAJ_1724	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
PAJ_1725	SSF54292	2Fe-2S ferredoxin-like
PAJ_1726	SSF50494	Trypsin-like serine proteases
PAJ_1726	SSF54060	His-Me finger endonucleases
PAJ_1727	SSF46785	"Winged helix" DNA-binding domain
PAJ_1727	SSF54909	Dimeric alpha+beta barrel
PAJ_1729	SSF46689	Homeodomain-like
PAJ_1729	SSF48498	Tetracyclin repressor-like, C-terminal domain
PAJ_1730	SSF55103	FAD-linked oxidases, C-terminal domain
PAJ_1730	SSF56176	FAD-binding/transporter-associated domain-like
PAJ_1731	SSF53448	Nucleotide-diphospho-sugar transferases
PAJ_1732	SSF51735	NAD(P)-binding Rossmann-fold domains
PAJ_1732	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
PAJ_1733	SSF54909	Dimeric alpha+beta barrel
PAJ_1734	SSF53639	AraD/HMP-PK domain-like
PAJ_1735	SSF51658	Xylose isomerase-like
PAJ_1736	SSF53067	Actin-like ATPase domain
PAJ_1737	SSF46689	Homeodomain-like
PAJ_1737	SSF51182	RmlC-like cupins
PAJ_1738	SSF46689	Homeodomain-like
PAJ_1738	SSF51215	Regulatory protein AraC
PAJ_1740	SSF53720	ALDH-like
PAJ_1743	SSF141452	Hcp1-like
PAJ_1744	SSF141452	Hcp1-like
PAJ_1745	SSF51679	Bacterial luciferase-like
PAJ_1746	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
PAJ_1746	SSF51735	NAD(P)-binding Rossmann-fold domains
PAJ_1747	SSF47413	lambda repressor-like DNA-binding domains
PAJ_1747	SSF53822	Periplasmic binding protein-like I
PAJ_1750	SSF56601	beta-lactamase/transpeptidase-like
PAJ_1750	SSF69189	Penicillin-binding protein associated domain
PAJ_1751	SSF53098	Ribonuclease H-like
PAJ_1753	SSF51658	Xylose isomerase-like
PAJ_1754	SSF53639	AraD/HMP-PK domain-like
PAJ_1755	SSF142764	YgbK-like
PAJ_1756	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
PAJ_1756	SSF51735	NAD(P)-binding Rossmann-fold domains
PAJ_1757	SSF100950	NagB/RpiA/CoA transferase-like
PAJ_1757	SSF46785	"Winged helix" DNA-binding domain
PAJ_1759	SSF54368	Glutamine synthetase, N-terminal domain
PAJ_1759	SSF55931	Glutamine synthetase/guanido kinase
PAJ_1760	SSF52317	Class I glutamine amidotransferase-like
PAJ_1761	SSF47413	lambda repressor-like DNA-binding domains
PAJ_1762	SSF51905	FAD/NAD(P)-binding domain
PAJ_1763	SSF51735	NAD(P)-binding Rossmann-fold domains
PAJ_1764	SSF53850	Periplasmic binding protein-like II
PAJ_1764	SSF54913	GlnB-like
PAJ_1765	SSF53720	ALDH-like
PAJ_1766	SSF53383	PLP-dependent transferases
PAJ_1767	SSF54211	Ribosomal protein S5 domain 2-like
PAJ_1767	SSF56784	HAD-like
PAJ_1769	SSF52317	Class I glutamine amidotransferase-like
PAJ_1770	SSF51366	Ribulose-phoshate binding barrel
PAJ_1771	SSF51366	Ribulose-phoshate binding barrel
PAJ_1772	SSF101386	all-alpha NTP pyrophosphatases
PAJ_1772	SSF141734	HisI-like
PAJ_1774	SSF47413	lambda repressor-like DNA-binding domains
PAJ_1775	SSF55826	YbaK/ProRS associated domain
PAJ_1776	SSF53850	Periplasmic binding protein-like II
PAJ_1777	SSF53187	Zn-dependent exopeptidases
PAJ_1778	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
PAJ_1778	SSF51735	NAD(P)-binding Rossmann-fold domains
PAJ_1780	SSF53448	Nucleotide-diphospho-sugar transferases
PAJ_1780	SSF56112	Protein kinase-like (PK-like)
PAJ_1781	SSF53448	Nucleotide-diphospho-sugar transferases
PAJ_1783	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_1784	SSF53448	Nucleotide-diphospho-sugar transferases
PAJ_1787	SSF51735	NAD(P)-binding Rossmann-fold domains
PAJ_1788	SSF53448	Nucleotide-diphospho-sugar transferases
PAJ_1790	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
PAJ_1792	SSF51126	Pectin lyase-like
PAJ_1792	SSF51327	Head-binding domain of phage P22 tailspike protein
PAJ_1793	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
PAJ_1794	SSF53448	Nucleotide-diphospho-sugar transferases
PAJ_1795	SSF53448	Nucleotide-diphospho-sugar transferases
PAJ_1797	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_1798	SSF52788	Phosphotyrosine protein phosphatases I
PAJ_1801	SSF54631	CBS-domain pair
PAJ_1801	SSF56176	FAD-binding/transporter-associated domain-like
PAJ_1803	SSF51283	dUTPase-like
PAJ_1804	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_1805	SSF48317	Acid phosphatase/Vanadium-dependent haloperoxidase
PAJ_1806	SSF55073	Nucleotide cyclase
PAJ_1806	SSF55785	PYP-like sensor domain (PAS domain)
PAJ_1807	SSF53067	Actin-like ATPase domain
PAJ_1808	SSF111369	HlyD-like secretion proteins
PAJ_1809	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
PAJ_1809	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
PAJ_1809	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
PAJ_1810	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
PAJ_1810	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
PAJ_1810	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
PAJ_1811	SSF103473	MFS general substrate transporter
PAJ_1812	SSF158472	HAMP domain-like
PAJ_1812	SSF47384	Homodimeric domain of signal transducing histidine kinase
PAJ_1812	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
PAJ_1813	SSF46894	C-terminal effector domain of the bipartite response regulators
PAJ_1813	SSF52172	CheY-like
PAJ_1815	SSF111331	NAD kinase/diacylglycerol kinase-like
PAJ_1816	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
PAJ_1816	SSF51735	NAD(P)-binding Rossmann-fold domains
PAJ_1817	SSF46785	"Winged helix" DNA-binding domain
PAJ_1817	SSF48008	GntR ligand-binding domain-like
PAJ_1818	SSF53613	Ribokinase-like
PAJ_1819	SSF53613	Ribokinase-like
PAJ_1823	SSF51905	FAD/NAD(P)-binding domain
PAJ_1823	SSF52833	Thioredoxin-like
PAJ_1824	SSF52833	Thioredoxin-like
PAJ_1825	SSF55729	Acyl-CoA N-acyltransferases (Nat)
PAJ_1826	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_1827	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
PAJ_1827	SSF50249	Nucleic acid-binding proteins
PAJ_1827	SSF52374	Nucleotidylyl transferase
PAJ_1827	SSF57770	Methionyl-tRNA synthetase (MetRS), Zn-domain
PAJ_1830	SSF53927	Cytidine deaminase-like
PAJ_1831	SSF51735	NAD(P)-binding Rossmann-fold domains
PAJ_1831	SSF53223	Aminoacid dehydrogenase-like, N-terminal domain
PAJ_1834	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_1835	SSF53822	Periplasmic binding protein-like I
PAJ_1836	SSF47413	lambda repressor-like DNA-binding domains
PAJ_1836	SSF53822	Periplasmic binding protein-like I
PAJ_1838	SSF55620	Tetrahydrobiopterin biosynthesis enzymes-like
PAJ_1839	SSF103473	MFS general substrate transporter
PAJ_1840	SSF46785	"Winged helix" DNA-binding domain
PAJ_1840	SSF53850	Periplasmic binding protein-like II
PAJ_1841	SSF50129	GroES-like
PAJ_1841	SSF51735	NAD(P)-binding Rossmann-fold domains
PAJ_1842	SSF53474	alpha/beta-Hydrolases
PAJ_1843	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_1844	SSF81345	ABC transporter involved in vitamin B12 uptake, BtuC
PAJ_1846	SSF46785	"Winged helix" DNA-binding domain
PAJ_1846	SSF53850	Periplasmic binding protein-like II
PAJ_1849	SSF51658	Xylose isomerase-like
PAJ_1850	SSF52794	PTS system IIB component-like
PAJ_1851	SSF53613	Ribokinase-like
PAJ_1852	SSF55594	HPr-like
PAJ_1852	SSF55804	Phoshotransferase/anion transport protein
PAJ_1854	SSF51569	Aldolase
PAJ_1855	SSF47413	lambda repressor-like DNA-binding domains
PAJ_1855	SSF53822	Periplasmic binding protein-like I
PAJ_1856	SSF103473	MFS general substrate transporter
PAJ_1859	SSF50104	Translation proteins SH3-like domain
PAJ_1859	SSF50249	Nucleic acid-binding proteins
PAJ_1860	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_1861	SSF48317	Acid phosphatase/Vanadium-dependent haloperoxidase
PAJ_1862	SSF54001	Cysteine proteinases
PAJ_1863	SSF141868	EAL domain-like
PAJ_1864	SSF53850	Periplasmic binding protein-like II
PAJ_1865	SSF161098	MetI-like
PAJ_1866	SSF161098	MetI-like
PAJ_1867	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_1869	SSF103473	MFS general substrate transporter
PAJ_1870	SSF55120	Pseudouridine synthase
PAJ_1870	SSF55174	Alpha-L RNA-binding motif
PAJ_1871	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_1871	SSF57829	Zn-binding ribosomal proteins
PAJ_1872	SSF50715	Ribosomal protein L25-like
PAJ_1874	SSF158651	YejL-like
PAJ_1875	SSF53649	Alkaline phosphatase-like
PAJ_1877	SSF111283	Putative modulator of DNA gyrase, PmbA/TldD
PAJ_1878	SSF111283	Putative modulator of DNA gyrase, PmbA/TldD
PAJ_1879	SSF52833	Thioredoxin-like
PAJ_1880	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_1880	SSF90123	ABC transporter transmembrane region
PAJ_1881	SSF56935	Porins
PAJ_1882	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
PAJ_1882	SSF88946	Sigma2 domain of RNA polymerase sigma factors
PAJ_1884	SSF74653	TolA/TonB C-terminal domain
PAJ_1887	SSF51011	Glycosyl hydrolase domain
PAJ_1887	SSF51445	(Trans)glycosidases
PAJ_1888	SSF103473	MFS general substrate transporter
PAJ_1889	SSF50182	Sm-like ribonucleoproteins
PAJ_1890	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_1890	SSF90123	ABC transporter transmembrane region
PAJ_1891	SSF51197	Clavaminate synthase-like
PAJ_1892	SSF143631	ApbE-like
PAJ_1893	SSF56935	Porins
PAJ_1894	SSF111369	HlyD-like secretion proteins
PAJ_1895	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_1895	SSF90123	ABC transporter transmembrane region
PAJ_1896	SSF56954	Outer membrane efflux proteins (OEP)
PAJ_1898	SSF103473	MFS general substrate transporter
PAJ_1899	SSF47226	Histidine-containing phosphotransfer domain, HPT domain
PAJ_1899	SSF47384	Homodimeric domain of signal transducing histidine kinase
PAJ_1899	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
PAJ_1900	SSF46894	C-terminal effector domain of the bipartite response regulators
PAJ_1900	SSF52172	CheY-like
PAJ_1901	SSF47384	Homodimeric domain of signal transducing histidine kinase
PAJ_1901	SSF52172	CheY-like
PAJ_1901	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
PAJ_1902	SSF101904	GyrA/ParC C-terminal domain-like
PAJ_1902	SSF56719	Type II DNA topoisomerase
PAJ_1903	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
PAJ_1904	SSF48168	R1 subunit of ribonucleotide reductase, N-terminal domain
PAJ_1904	SSF51998	PFL-like glycyl radical enzymes
PAJ_1905	SSF47240	Ferritin-like
PAJ_1906	SSF54292	2Fe-2S ferredoxin-like
PAJ_1907	SSF53218	Molybdenum cofactor biosynthesis proteins
PAJ_1909	SSF74650	Galactose mutarotase-like
PAJ_1909	SSF81296	E set domains
PAJ_1910	SSF55729	Acyl-CoA N-acyltransferases (Nat)
PAJ_1911	SSF53474	alpha/beta-Hydrolases
PAJ_1917	SSF54862	4Fe-4S ferredoxins
PAJ_1919	SSF50692	ADC-like
PAJ_1919	SSF53706	Formate dehydrogenase/DMSO reductase, domains 1-3
PAJ_1919	SSF54292	2Fe-2S ferredoxin-like
PAJ_1919	SSF54862	4Fe-4S ferredoxins
PAJ_1920	SSF140490	Nqo1C-terminal domain-like
PAJ_1920	SSF142019	Nqo1 FMN-binding domain-like
PAJ_1920	SSF142984	Nqo1 middle domain-like
PAJ_1921	SSF52833	Thioredoxin-like
PAJ_1922	SSF143243	Nqo5-like
PAJ_1922	SSF56762	HydB/Nqo4-like
PAJ_1923	SSF56770	HydA/Nqo6-like
PAJ_1925	SSF46785	"Winged helix" DNA-binding domain
PAJ_1925	SSF53850	Periplasmic binding protein-like II
PAJ_1926	SSF53383	PLP-dependent transferases
PAJ_1927	SSF109604	HD-domain/PDEase-like
PAJ_1928	SSF56784	HAD-like
PAJ_1929	SSF116960	YfbU-like
PAJ_1931	SSF53067	Actin-like ATPase domain
PAJ_1932	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_1932	SSF53659	Isocitrate/Isopropylmalate dehydrogenase-like
PAJ_1932	SSF75138	HprK N-terminal domain-like
PAJ_1933	SSF50331	MOP-like
PAJ_1933	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_1934	SSF53383	PLP-dependent transferases
PAJ_1935	SSF53383	PLP-dependent transferases
PAJ_1936	SSF53850	Periplasmic binding protein-like II
PAJ_1937	SSF161098	MetI-like
PAJ_1938	SSF161098	MetI-like
PAJ_1939	SSF50129	GroES-like
PAJ_1939	SSF51735	NAD(P)-binding Rossmann-fold domains
PAJ_1940	SSF47413	lambda repressor-like DNA-binding domains
PAJ_1941	SSF55811	Nudix
PAJ_1942	SSF47616	GST C-terminal domain-like
PAJ_1942	SSF52833	Thioredoxin-like
PAJ_1943	SSF51735	NAD(P)-binding Rossmann-fold domains
PAJ_1944	SSF103473	MFS general substrate transporter
PAJ_1945	SSF53067	Actin-like ATPase domain
PAJ_1946	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
PAJ_1946	SSF51735	NAD(P)-binding Rossmann-fold domains
PAJ_1947	SSF100950	NagB/RpiA/CoA transferase-like
PAJ_1948	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_1949	SSF161098	MetI-like
PAJ_1950	SSF161098	MetI-like
PAJ_1951	SSF53850	Periplasmic binding protein-like II
PAJ_1952	SSF52507	Homo-oligomeric flavin-containing Cys decarboxylases, HFCD
PAJ_1953	SSF53271	PRTase-like
PAJ_1953	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
PAJ_1955	SSF110997	Sporulation related repeat
PAJ_1956	SSF53244	MurD-like peptide ligases, peptide-binding domain
PAJ_1956	SSF53623	MurD-like peptide ligases, catalytic domain
PAJ_1957	SSF52096	ClpP/crotonase
PAJ_1959	SSF55120	Pseudouridine synthase
PAJ_1960	SSF51735	NAD(P)-binding Rossmann-fold domains
PAJ_1960	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
PAJ_1961	SSF51735	NAD(P)-binding Rossmann-fold domains
PAJ_1961	SSF52283	Formate/glycerate dehydrogenase catalytic domain-like
PAJ_1962	SSF103481	Multidrug resistance efflux transporter EmrE
PAJ_1963	SSF47384	Homodimeric domain of signal transducing histidine kinase
PAJ_1963	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
PAJ_1964	SSF46894	C-terminal effector domain of the bipartite response regulators
PAJ_1964	SSF52172	CheY-like
PAJ_1965	SSF53850	Periplasmic binding protein-like II
PAJ_1969	SSF46785	"Winged helix" DNA-binding domain
PAJ_1969	SSF53383	PLP-dependent transferases
PAJ_1970	SSF53901	Thiolase-like
PAJ_1971	SSF51905	FAD/NAD(P)-binding domain
PAJ_1975	SSF55166	Hedgehog/DD-peptidase
PAJ_1976	SSF103263	Chorismate synthase, AroC
PAJ_1977	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
PAJ_1979	SSF160443	SMR domain-like
PAJ_1980	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
PAJ_1981	SSF53254	Phosphoglycerate mutase-like
PAJ_1982	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
PAJ_1982	SSF51735	NAD(P)-binding Rossmann-fold domains
PAJ_1982	SSF52096	ClpP/crotonase
PAJ_1984	SSF53901	Thiolase-like
PAJ_1986	SSF56935	Porins
PAJ_1988	SSF48452	TPR-like
PAJ_1990	SSF52833	Thioredoxin-like
PAJ_1992	SSF82093	Heme chaperone CcmE
PAJ_1996	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_1999	SSF51695	PLC-like phosphodiesterases
PAJ_2000	SSF50331	MOP-like
PAJ_2000	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_2001	SSF161098	MetI-like
PAJ_2002	SSF160964	MalF N-terminal region-like
PAJ_2002	SSF161098	MetI-like
PAJ_2003	SSF53850	Periplasmic binding protein-like II
PAJ_2004	SSF46785	"Winged helix" DNA-binding domain
PAJ_2004	SSF53067	Actin-like ATPase domain
PAJ_2006	SSF49401	Bacterial adhesins
PAJ_2007	SSF49401	Bacterial adhesins
PAJ_2008	SSF49401	Bacterial adhesins
PAJ_2009	SSF49354	PapD-like
PAJ_2009	SSF49584	Periplasmic chaperone C-domain
PAJ_2010	SSF49401	Bacterial adhesins
PAJ_2011	SSF49401	Bacterial adhesins
PAJ_2012	SSF49354	PapD-like
PAJ_2012	SSF49584	Periplasmic chaperone C-domain
PAJ_2013	SSF141729	FimD N-terminal domain-like
PAJ_2014	SSF49401	Bacterial adhesins
PAJ_2015	SSF49401	Bacterial adhesins
PAJ_2018	SSF103473	MFS general substrate transporter
PAJ_2019	SSF63829	Calcium-dependent phosphotriesterase
PAJ_2021	SSF46785	"Winged helix" DNA-binding domain
PAJ_2021	SSF55781	GAF domain-like
PAJ_2022	SSF103473	MFS general substrate transporter
PAJ_2023	SSF111369	HlyD-like secretion proteins
PAJ_2024	SSF53383	PLP-dependent transferases
PAJ_2025	SSF55729	Acyl-CoA N-acyltransferases (Nat)
PAJ_2026	SSF55781	GAF domain-like
PAJ_2026	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
PAJ_2027	SSF52172	CheY-like
PAJ_2028	SSF53067	Actin-like ATPase domain
PAJ_2029	SSF52467	DHS-like NAD/FAD-binding domain
PAJ_2029	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
PAJ_2030	SSF51430	NAD(P)-linked oxidoreductase
PAJ_2032	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
PAJ_2035	SSF53098	Ribonuclease H-like
PAJ_2036	SSF81301	Nucleotidyltransferase
PAJ_2038	SSF46955	Putative DNA-binding domain
PAJ_2039	SSF48163	An anticodon-binding domain of class I aminoacyl-tRNA synthetases
PAJ_2039	SSF52374	Nucleotidylyl transferase
PAJ_2041	SSF46785	"Winged helix" DNA-binding domain
PAJ_2041	SSF53850	Periplasmic binding protein-like II
PAJ_2044	SSF47781	RuvA domain 2-like
PAJ_2044	SSF50249	Nucleic acid-binding proteins
PAJ_2044	SSF52113	BRCT domain
PAJ_2044	SSF56091	DNA ligase/mRNA capping enzyme, catalytic domain
PAJ_2045	SSF64383	Cell-division protein ZipA, C-terminal domain
PAJ_2047	SSF53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes
PAJ_2048	SSF55594	HPr-like
PAJ_2049	SSF47831	Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain
PAJ_2049	SSF51621	Phosphoenolpyruvate/pyruvate domain
PAJ_2049	SSF52009	Phosphohistidine domain
PAJ_2050	SSF51261	Duplicated hybrid motif
PAJ_2051	SSF158472	HAMP domain-like
PAJ_2051	SSF47384	Homodimeric domain of signal transducing histidine kinase
PAJ_2051	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
PAJ_2052	SSF46894	C-terminal effector domain of the bipartite response regulators
PAJ_2052	SSF52172	CheY-like
PAJ_2053	SSF53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes
PAJ_2054	SSF50331	MOP-like
PAJ_2054	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_2055	SSF161098	MetI-like
PAJ_2056	SSF161098	MetI-like
PAJ_2057	SSF53850	Periplasmic binding protein-like II
PAJ_2060	SSF55729	Acyl-CoA N-acyltransferases (Nat)
PAJ_2061	SSF53187	Zn-dependent exopeptidases
PAJ_2063	SSF102886	Coproporphyrinogen III oxidase
PAJ_2064	SSF51735	NAD(P)-binding Rossmann-fold domains
PAJ_2064	SSF53223	Aminoacid dehydrogenase-like, N-terminal domain
PAJ_2064	SSF53659	Isocitrate/Isopropylmalate dehydrogenase-like
PAJ_2065	SSF51569	Aldolase
PAJ_2066	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
PAJ_2066	SSF52922	TK C-terminal domain-like
PAJ_2069	SSF103190	Sensory domain-like
PAJ_2069	SSF55785	PYP-like sensor domain (PAS domain)
PAJ_2069	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
PAJ_2069	SSF55890	Sporulation response regulatory protein Spo0B
PAJ_2070	SSF52172	CheY-like
PAJ_2071	SSF56601	beta-lactamase/transpeptidase-like
PAJ_2073	SSF100950	NagB/RpiA/CoA transferase-like
PAJ_2073	SSF46785	"Winged helix" DNA-binding domain
PAJ_2074	SSF53822	Periplasmic binding protein-like I
PAJ_2075	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_2078	SSF51366	Ribulose-phoshate binding barrel
PAJ_2079	SSF53067	Actin-like ATPase domain
PAJ_2080	SSF53613	Ribokinase-like
PAJ_2081	SSF55811	Nudix
PAJ_2083	SSF159871	YdgH-like
PAJ_2084	SSF158472	HAMP domain-like
PAJ_2084	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
PAJ_2085	SSF46894	C-terminal effector domain of the bipartite response regulators
PAJ_2085	SSF52172	CheY-like
PAJ_2086	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
PAJ_2086	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
PAJ_2086	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
PAJ_2087	SSF52833	Thioredoxin-like
PAJ_2088	SSF53187	Zn-dependent exopeptidases
PAJ_2088	SSF55031	Bacterial exopeptidase dimerisation domain
PAJ_2089	SSF53474	alpha/beta-Hydrolases
PAJ_2090	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_2090	SSF55729	Acyl-CoA N-acyltransferases (Nat)
PAJ_2092	SSF56104	SAICAR synthase-like
PAJ_2095	SSF51569	Aldolase
PAJ_2096	SSF55021	ACT-like
PAJ_2097	SSF52833	Thioredoxin-like
PAJ_2099	SSF48208	Six-hairpin glycosidases
PAJ_2100	SSF103473	MFS general substrate transporter
PAJ_2101	SSF46689	Homeodomain-like
PAJ_2101	SSF51215	Regulatory protein AraC
PAJ_2102	SSF103190	Sensory domain-like
PAJ_2102	SSF55073	Nucleotide cyclase
PAJ_2103	SSF56300	Metallo-dependent phosphatases
PAJ_2104	SSF50331	MOP-like
PAJ_2104	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_2105	SSF161098	MetI-like
PAJ_2106	SSF161098	MetI-like
PAJ_2107	SSF53850	Periplasmic binding protein-like II
PAJ_2108	SSF47413	lambda repressor-like DNA-binding domains
PAJ_2108	SSF53822	Periplasmic binding protein-like I
PAJ_2109	SSF48452	TPR-like
PAJ_2110	SSF52833	Thioredoxin-like
PAJ_2111	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_2113	SSF53271	PRTase-like
PAJ_2114	SSF55326	PurM N-terminal domain-like
PAJ_2114	SSF56042	PurM C-terminal domain-like
PAJ_2115	SSF53328	Formyltransferase
PAJ_2116	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_2117	SSF161098	MetI-like
PAJ_2118	SSF161098	MetI-like
PAJ_2118	SSF50969	YVTN repeat-like/Quinoprotein amine dehydrogenase
PAJ_2119	SSF140356	PPK N-terminal domain-like
PAJ_2119	SSF143724	PHP14-like
PAJ_2119	SSF56024	Phospholipase D/nuclease
PAJ_2120	SSF109604	HD-domain/PDEase-like
PAJ_2120	SSF53067	Actin-like ATPase domain
PAJ_2121	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
PAJ_2122	SSF158791	MgtE N-terminal domain-like
PAJ_2122	SSF161093	MgtE membrane domain-like
PAJ_2122	SSF54631	CBS-domain pair
PAJ_2125	SSF48452	TPR-like
PAJ_2126	SSF53474	alpha/beta-Hydrolases
PAJ_2127	SSF103481	Multidrug resistance efflux transporter EmrE
PAJ_2128	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_2128	SSF89550	PHP domain-like
PAJ_2130	SSF101082	Typo IV secretion system protein TraC
PAJ_2133	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_2134	SSF56349	DNA breaking-rejoining enzymes
PAJ_2135	SSF52317	Class I glutamine amidotransferase-like
PAJ_2135	SSF52402	Adenine nucleotide alpha hydrolases-like
PAJ_2135	SSF54810	GMP synthetase C-terminal dimerisation domain
PAJ_2137	SSF51412	Inosine monophosphate dehydrogenase (IMPDH)
PAJ_2137	SSF54631	CBS-domain pair
PAJ_2139	SSF55486	Metalloproteases ("zincins"), catalytic domain
PAJ_2140	SSF50998	Quinoprotein alcohol dehydrogenase-like
PAJ_2141	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_2142	SSF50998	Quinoprotein alcohol dehydrogenase-like
PAJ_2143	SSF48452	TPR-like
PAJ_2144	SSF52954	Class II aaRS ABD-related
PAJ_2144	SSF55681	Class II aaRS and biotin synthetases
PAJ_2145	SSF51604	Enolase C-terminal domain-like
PAJ_2145	SSF56014	Nitrite and sulphite reductase 4Fe-4S domain-like
PAJ_2146	SSF47413	lambda repressor-like DNA-binding domains
PAJ_2147	SSF48452	TPR-like
PAJ_2148	SSF102114	Radical SAM enzymes
PAJ_2149	SSF54919	Nucleoside diphosphate kinase, NDK
PAJ_2150	SSF53955	Lysozyme-like
PAJ_2150	SSF56601	beta-lactamase/transpeptidase-like
PAJ_2151	SSF48239	Terpenoid cyclases/Protein prenyltransferases
PAJ_2152	SSF52821	Rhodanese/Cell cycle control phosphatase
PAJ_2154	SSF53187	Zn-dependent exopeptidases
PAJ_2155	SSF53383	PLP-dependent transferases
PAJ_2157	SSF46785	"Winged helix" DNA-binding domain
PAJ_2158	SSF75217	alpha/beta knot
PAJ_2159	SSF56655	Carbohydrate phosphatase
PAJ_2164	SSF63520	PTS-regulatory domain, PRD
PAJ_2165	SSF103473	MFS general substrate transporter
PAJ_2166	SSF53383	PLP-dependent transferases
PAJ_2167	SSF46458	Globin-like
PAJ_2167	SSF52343	Ferredoxin reductase-like, C-terminal NADP-linked domain
PAJ_2167	SSF63380	Riboflavin synthase domain-like
PAJ_2168	SSF54913	GlnB-like
PAJ_2169	SSF46689	Homeodomain-like
PAJ_2169	SSF52172	CheY-like
PAJ_2169	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_2171	SSF47384	Homodimeric domain of signal transducing histidine kinase
PAJ_2171	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
PAJ_2172	SSF109736	FGAM synthase PurL, linker domain
PAJ_2172	SSF52317	Class I glutamine amidotransferase-like
PAJ_2172	SSF55326	PurM N-terminal domain-like
PAJ_2172	SSF56042	PurM C-terminal domain-like
PAJ_2172	SSF82697	PurS-like
PAJ_2174	SSF53850	Periplasmic binding protein-like II
PAJ_2174	SSF53955	Lysozyme-like
PAJ_2175	SSF53927	Cytidine deaminase-like
PAJ_2177	SSF46689	Homeodomain-like
PAJ_2177	SSF53697	SIS domain
PAJ_2178	SSF54862	4Fe-4S ferredoxins
PAJ_2179	SSF56214	4'-phosphopantetheinyl transferase
PAJ_2180	SSF63892	Pyridoxine 5'-phosphate synthase
PAJ_2182	SSF50249	Nucleic acid-binding proteins
PAJ_2182	SSF57863	ArfGap/RecO-like zinc finger
PAJ_2183	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_2183	SSF54814	Prokaryotic type KH domain (KH-domain type II)
PAJ_2184	SSF54768	dsRNA-binding domain-like
PAJ_2184	SSF69065	RNase III domain-like
PAJ_2185	SSF51306	LexA/Signal peptidase
PAJ_2186	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_2186	SSF54980	EF-G C-terminal domain-like
PAJ_2189	SSF89069	N-terminal, cytoplasmic domain of anti-sigmaE factor RseA
PAJ_2190	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
PAJ_2190	SSF88946	Sigma2 domain of RNA polymerase sigma factors
PAJ_2191	SSF46977	Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain
PAJ_2191	SSF51905	FAD/NAD(P)-binding domain
PAJ_2191	SSF56425	Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain
PAJ_2192	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
PAJ_2193	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_2194	SSF51998	PFL-like glycyl radical enzymes
PAJ_2195	SSF52141	Uracil-DNA glycosylase-like
PAJ_2196	SSF51064	Head domain of nucleotide exchange factor GrpE
PAJ_2196	SSF58014	Coiled-coil domain of nucleotide exchange factor GrpE
PAJ_2197	SSF111331	NAD kinase/diacylglycerol kinase-like
PAJ_2198	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_2200	SSF54285	MoaD/ThiS
PAJ_2201	SSF55961	Bet v1-like
PAJ_2202	SSF74982	Small protein B (SmpB)
PAJ_2203	SSF56349	DNA breaking-rejoining enzymes
PAJ_2208	SSF53098	Ribonuclease H-like
PAJ_2210	SSF53448	Nucleotide-diphospho-sugar transferases
PAJ_2212	SSF51556	Metallo-dependent hydrolases
PAJ_2215	SSF46689	Homeodomain-like
PAJ_2215	SSF48498	Tetracyclin repressor-like, C-terminal domain
PAJ_2216	SSF53474	alpha/beta-Hydrolases
PAJ_2217	SSF56935	Porins
PAJ_2218	SSF53807	"Helical backbone" metal receptor
PAJ_2219	SSF81345	ABC transporter involved in vitamin B12 uptake, BtuC
PAJ_2220	SSF81345	ABC transporter involved in vitamin B12 uptake, BtuC
PAJ_2221	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_2222	SSF46785	"Winged helix" DNA-binding domain
PAJ_2222	SSF55781	GAF domain-like
PAJ_2223	SSF89562	RraA-like
PAJ_2224	SSF51735	NAD(P)-binding Rossmann-fold domains
PAJ_2224	SSF52283	Formate/glycerate dehydrogenase catalytic domain-like
PAJ_2225	SSF63829	Calcium-dependent phosphotriesterase
PAJ_2226	SSF103473	MFS general substrate transporter
PAJ_2227	SSF103473	MFS general substrate transporter
PAJ_2228	SSF50151	SacY-like RNA-binding domain
PAJ_2228	SSF63520	PTS-regulatory domain, PRD
PAJ_2229	SSF52096	ClpP/crotonase
PAJ_2230	SSF50129	GroES-like
PAJ_2230	SSF51735	NAD(P)-binding Rossmann-fold domains
PAJ_2231	SSF46785	"Winged helix" DNA-binding domain
PAJ_2232	SSF51126	Pectin lyase-like
PAJ_2233	SSF52218	Flavoproteins
PAJ_2234	SSF46785	"Winged helix" DNA-binding domain
PAJ_2234	SSF53850	Periplasmic binding protein-like II
PAJ_2235	SSF159800	PrpR receptor domain-like
PAJ_2235	SSF46689	Homeodomain-like
PAJ_2235	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_2236	SSF51338	Composite domain of metallo-dependent hydrolases
PAJ_2236	SSF51556	Metallo-dependent hydrolases
PAJ_2238	SSF89562	RraA-like
PAJ_2239	SSF51735	NAD(P)-binding Rossmann-fold domains
PAJ_2239	SSF52283	Formate/glycerate dehydrogenase catalytic domain-like
PAJ_2240	SSF56935	Porins
PAJ_2241	SSF51316	Mss4-like
PAJ_2242	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
PAJ_2242	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
PAJ_2242	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
PAJ_2243	SSF55729	Acyl-CoA N-acyltransferases (Nat)
PAJ_2244	SSF46894	C-terminal effector domain of the bipartite response regulators
PAJ_2244	SSF52172	CheY-like
PAJ_2245	SSF158472	HAMP domain-like
PAJ_2245	SSF47384	Homodimeric domain of signal transducing histidine kinase
PAJ_2245	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
PAJ_2246	SSF56059	Glutathione synthetase ATP-binding domain-like
PAJ_2247	SSF53807	"Helical backbone" metal receptor
PAJ_2248	SSF81345	ABC transporter involved in vitamin B12 uptake, BtuC
PAJ_2249	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_2251	SSF46894	C-terminal effector domain of the bipartite response regulators
PAJ_2252	SSF56784	HAD-like
PAJ_2252	SSF81653	Calcium ATPase, transduction domain A
PAJ_2252	SSF81665	Calcium ATPase, transmembrane domain M
PAJ_2253	SSF53850	Periplasmic binding protein-like II
PAJ_2254	SSF161098	MetI-like
PAJ_2255	SSF161098	MetI-like
PAJ_2256	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_2257	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_2258	SSF55729	Acyl-CoA N-acyltransferases (Nat)
PAJ_2259	SSF82282	Homocysteine S-methyltransferase
PAJ_2261	SSF159894	YgaC/TfoX-N like
PAJ_2263	SSF52833	Thioredoxin-like
PAJ_2264	SSF52218	Flavoproteins
PAJ_2265	SSF48168	R1 subunit of ribonucleotide reductase, N-terminal domain
PAJ_2265	SSF51998	PFL-like glycyl radical enzymes
PAJ_2266	SSF47240	Ferritin-like
PAJ_2267	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_2267	SSF54631	CBS-domain pair
PAJ_2268	SSF161098	MetI-like
PAJ_2269	SSF53850	Periplasmic binding protein-like II
PAJ_2270	SSF103473	MFS general substrate transporter
PAJ_2272	SSF46785	"Winged helix" DNA-binding domain
PAJ_2273	SSF111369	HlyD-like secretion proteins
PAJ_2274	SSF103473	MFS general substrate transporter
PAJ_2275	SSF50129	GroES-like
PAJ_2275	SSF51735	NAD(P)-binding Rossmann-fold domains
PAJ_2276	SSF46785	"Winged helix" DNA-binding domain
PAJ_2277	SSF55315	L30e-like
PAJ_2277	SSF75217	alpha/beta knot
PAJ_2278	SSF52833	Thioredoxin-like
PAJ_2280	SSF51735	NAD(P)-binding Rossmann-fold domains
PAJ_2280	SSF52210	Succinyl-CoA synthetase domains
PAJ_2280	SSF55729	Acyl-CoA N-acyltransferases (Nat)
PAJ_2280	SSF56059	Glutathione synthetase ATP-binding domain-like
PAJ_2281	SSF56024	Phospholipase D/nuclease
PAJ_2282	SSF103473	MFS general substrate transporter
PAJ_2283	SSF50129	GroES-like
PAJ_2283	SSF51735	NAD(P)-binding Rossmann-fold domains
PAJ_2284	SSF46785	"Winged helix" DNA-binding domain
PAJ_2284	SSF54909	Dimeric alpha+beta barrel
PAJ_2285	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_2285	SSF81923	Double Clp-N motif
PAJ_2287	SSF64438	CNF1/YfiH-like putative cysteine hydrolases
PAJ_2288	SSF55120	Pseudouridine synthase
PAJ_2288	SSF55174	Alpha-L RNA-binding motif
PAJ_2289	SSF48452	TPR-like
PAJ_2290	SSF69754	Ribosome binding protein Y (YfiA homologue)
PAJ_2291	SSF48600	Chorismate mutase II
PAJ_2291	SSF53850	Periplasmic binding protein-like II
PAJ_2291	SSF55021	ACT-like
PAJ_2292	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
PAJ_2292	SSF48600	Chorismate mutase II
PAJ_2292	SSF51735	NAD(P)-binding Rossmann-fold domains
PAJ_2293	SSF51569	Aldolase
PAJ_2294	SSF55729	Acyl-CoA N-acyltransferases (Nat)
PAJ_2295	SSF50104	Translation proteins SH3-like domain
PAJ_2296	SSF75217	alpha/beta knot
PAJ_2297	SSF50346	PRC-barrel domain
PAJ_2297	SSF50447	Translation proteins
PAJ_2298	SSF54565	Ribosomal protein S16
PAJ_2299	SSF47446	Signal peptide-binding domain
PAJ_2299	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_2301	SSF54631	CBS-domain pair
PAJ_2301	SSF56176	FAD-binding/transporter-associated domain-like
PAJ_2302	SSF63411	LuxS/MPP-like metallohydrolase
PAJ_2303	SSF55931	Glutamine synthetase/guanido kinase
PAJ_2305	SSF56784	HAD-like
PAJ_2306	SSF117130	CsrA-like
PAJ_2307	SSF101353	Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS)
PAJ_2307	SSF50447	Translation proteins
PAJ_2307	SSF55186	ThrRS/AlaRS common domain
PAJ_2307	SSF55681	Class II aaRS and biotin synthetases
PAJ_2309	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_2309	SSF54752	RecA protein, C-terminal domain
PAJ_2310	SSF142433	CinA-like
PAJ_2311	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
PAJ_2312	SSF57783	Zinc beta-ribbon
PAJ_2312	SSF82057	Prokaryotic SH3-related domain
PAJ_2313	SSF53955	Lysozyme-like
PAJ_2314	SSF48334	DNA repair protein MutS, domain III
PAJ_2314	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_2314	SSF53150	DNA repair protein MutS, domain II
PAJ_2314	SSF55271	DNA repair protein MutS, domain I
PAJ_2315	SSF47413	lambda repressor-like DNA-binding domains
PAJ_2316	SSF142823	ComB-like
PAJ_2317	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
PAJ_2317	SSF88946	Sigma2 domain of RNA polymerase sigma factors
PAJ_2318	SSF51261	Duplicated hybrid motif
PAJ_2319	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
PAJ_2320	SSF64167	SurE-like
PAJ_2321	SSF55120	Pseudouridine synthase
PAJ_2322	SSF69765	IpsF-like
PAJ_2323	SSF53448	Nucleotide-diphospho-sugar transferases
PAJ_2326	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_2327	SSF50447	Translation proteins
PAJ_2327	SSF50465	EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
PAJ_2327	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_2328	SSF52402	Adenine nucleotide alpha hydrolases-like
PAJ_2329	SSF53790	Tetrapyrrole methylase
PAJ_2329	SSF75615	Siroheme synthase middle domains-like
PAJ_2331	SSF53187	Zn-dependent exopeptidases
PAJ_2332	SSF46785	"Winged helix" DNA-binding domain
PAJ_2332	SSF55781	GAF domain-like
PAJ_2333	SSF55298	YjgF-like
PAJ_2334	SSF53850	Periplasmic binding protein-like II
PAJ_2335	SSF161098	MetI-like
PAJ_2336	SSF161098	MetI-like
PAJ_2337	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_2338	SSF51419	PLP-binding barrel
PAJ_2339	SSF52402	Adenine nucleotide alpha hydrolases-like
PAJ_2340	SSF55124	Nitrite/Sulfite reductase N-terminal domain-like
PAJ_2340	SSF56014	Nitrite and sulphite reductase 4Fe-4S domain-like
PAJ_2341	SSF52218	Flavoproteins
PAJ_2341	SSF52343	Ferredoxin reductase-like, C-terminal NADP-linked domain
PAJ_2341	SSF63380	Riboflavin synthase domain-like
PAJ_2342	SSF54001	Cysteine proteinases
PAJ_2343	SSF55620	Tetrahydrobiopterin biosynthesis enzymes-like
PAJ_2344	SSF50324	Inorganic pyrophosphatase
PAJ_2345	SSF102114	Radical SAM enzymes
PAJ_2347	SSF53187	Zn-dependent exopeptidases
PAJ_2347	SSF55031	Bacterial exopeptidase dimerisation domain
PAJ_2348	SSF56219	DNase I-like
PAJ_2349	SSF51604	Enolase C-terminal domain-like
PAJ_2349	SSF54826	Enolase N-terminal domain-like
PAJ_2350	SSF52317	Class I glutamine amidotransferase-like
PAJ_2350	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_2351	SSF101386	all-alpha NTP pyrophosphatases
PAJ_2352	SSF109604	HD-domain/PDEase-like
PAJ_2352	SSF55021	ACT-like
PAJ_2352	SSF81271	TGS-like
PAJ_2352	SSF81301	Nucleotidyltransferase
PAJ_2353	SSF50249	Nucleic acid-binding proteins
PAJ_2353	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
PAJ_2354	SSF158472	HAMP domain-like
PAJ_2354	SSF47226	Histidine-containing phosphotransfer domain, HPT domain
PAJ_2354	SSF47384	Homodimeric domain of signal transducing histidine kinase
PAJ_2354	SSF52172	CheY-like
PAJ_2354	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
PAJ_2355	SSF110738	Glycerate kinase I
PAJ_2356	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
PAJ_2356	SSF51735	NAD(P)-binding Rossmann-fold domains
PAJ_2357	SSF51621	Phosphoenolpyruvate/pyruvate domain
PAJ_2358	SSF51604	Enolase C-terminal domain-like
PAJ_2358	SSF54826	Enolase N-terminal domain-like
PAJ_2359	SSF51604	Enolase C-terminal domain-like
PAJ_2359	SSF54826	Enolase N-terminal domain-like
PAJ_2360	SSF103473	MFS general substrate transporter
PAJ_2363	SSF52218	Flavoproteins
PAJ_2364	SSF55120	Pseudouridine synthase
PAJ_2365	SSF158452	YqcC-like
PAJ_2367	SSF55620	Tetrahydrobiopterin biosynthesis enzymes-like
PAJ_2368	SSF102405	MCP/YpsA-like
PAJ_2369	SSF47807	5' to 3' exonuclease, C-terminal subdomain
PAJ_2369	SSF88723	PIN domain-like
PAJ_2370	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
PAJ_2372	SSF46785	"Winged helix" DNA-binding domain
PAJ_2372	SSF53850	Periplasmic binding protein-like II
PAJ_2373	SSF50182	Sm-like ribonucleoproteins
PAJ_2374	SSF53383	PLP-dependent transferases
PAJ_2375	SSF82649	SufE/NifU
PAJ_2376	SSF69572	Activating enzymes of the ubiquitin-like proteins
PAJ_2377	SSF50685	Barwin-like endoglucanases
PAJ_2378	SSF53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes
PAJ_2379	SSF53187	Zn-dependent exopeptidases
PAJ_2380	SSF53633	Carbamate kinase-like
PAJ_2380	SSF55729	Acyl-CoA N-acyltransferases (Nat)
PAJ_2381	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_2382	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_2382	SSF52980	Restriction endonuclease-like
PAJ_2383	SSF63411	LuxS/MPP-like metallohydrolase
PAJ_2384	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_2384	SSF52980	Restriction endonuclease-like
PAJ_2387	SSF54523	Pili subunits
PAJ_2388	SSF54523	Pili subunits
PAJ_2389	SSF55831	Thymidylate synthase/dCMP hydroxymethylase
PAJ_2391	SSF47831	Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain
PAJ_2391	SSF51621	Phosphoenolpyruvate/pyruvate domain
PAJ_2391	SSF52009	Phosphohistidine domain
PAJ_2391	SSF55781	GAF domain-like
PAJ_2392	SSF55811	Nudix
PAJ_2393	SSF52980	Restriction endonuclease-like
PAJ_2395	SSF50182	Sm-like ribonucleoproteins
PAJ_2396	SSF51430	NAD(P)-linked oxidoreductase
PAJ_2397	SSF50621	Alanine racemase C-terminal domain-like
PAJ_2397	SSF51419	PLP-binding barrel
PAJ_2398	SSF46785	"Winged helix" DNA-binding domain
PAJ_2398	SSF53850	Periplasmic binding protein-like II
PAJ_2399	SSF103473	MFS general substrate transporter
PAJ_2400	SSF50494	Trypsin-like serine proteases
PAJ_2401	SSF51182	RmlC-like cupins
PAJ_2402	SSF50249	Nucleic acid-binding proteins
PAJ_2402	SSF55681	Class II aaRS and biotin synthetases
PAJ_2403	SSF75620	Release factor
PAJ_2404	SSF64182	DHH phosphoesterases
PAJ_2405	SSF52833	Thioredoxin-like
PAJ_2405	SSF54423	DsbC/DsbG N-terminal domain-like
PAJ_2406	SSF56349	DNA breaking-rejoining enzymes
PAJ_2407	SSF52218	Flavoproteins
PAJ_2409	SSF109910	YgfY-like
PAJ_2410	SSF101790	Aminomethyltransferase beta-barrel domain
PAJ_2410	SSF103025	Folate-binding domain
PAJ_2412	SSF46689	Homeodomain-like
PAJ_2412	SSF53697	SIS domain
PAJ_2413	SSF51445	(Trans)glycosidases
PAJ_2414	SSF51735	NAD(P)-binding Rossmann-fold domains
PAJ_2415	SSF53383	PLP-dependent transferases
PAJ_2416	SSF51230	Single hybrid motif
PAJ_2417	SSF101790	Aminomethyltransferase beta-barrel domain
PAJ_2417	SSF103025	Folate-binding domain
PAJ_2418	SSF51905	FAD/NAD(P)-binding domain
PAJ_2419	SSF51905	FAD/NAD(P)-binding domain
PAJ_2420	SSF53092	Creatinase/prolidase N-terminal domain
PAJ_2420	SSF55920	Creatinase/aminopeptidase
PAJ_2421	SSF101327	YgfB-like
PAJ_2422	SSF102829	Cell division protein ZapA-like
PAJ_2423	SSF100950	NagB/RpiA/CoA transferase-like
PAJ_2424	SSF51735	NAD(P)-binding Rossmann-fold domains
PAJ_2424	SSF52283	Formate/glycerate dehydrogenase catalytic domain-like
PAJ_2424	SSF55021	ACT-like
PAJ_2425	SSF100950	NagB/RpiA/CoA transferase-like
PAJ_2425	SSF75445	D-ribose-5-phosphate isomerase (RpiA), lid domain
PAJ_2426	SSF46785	"Winged helix" DNA-binding domain
PAJ_2426	SSF53850	Periplasmic binding protein-like II
PAJ_2429	SSF50182	Sm-like ribonucleoproteins
PAJ_2429	SSF82689	Mechanosensitive channel protein MscS (YggB), C-terminal domain
PAJ_2429	SSF82861	Mechanosensitive channel protein MscS (YggB), transmembrane region
PAJ_2430	SSF51569	Aldolase
PAJ_2431	SSF53748	Phosphoglycerate kinase
PAJ_2432	SSF51735	NAD(P)-binding Rossmann-fold domains
PAJ_2432	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
PAJ_2433	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
PAJ_2433	SSF52922	TK C-terminal domain-like
PAJ_2435	SSF52768	Arginase/deacetylase
PAJ_2436	SSF50621	Alanine racemase C-terminal domain-like
PAJ_2436	SSF51419	PLP-binding barrel
PAJ_2437	SSF55973	S-adenosylmethionine synthetase
PAJ_2438	SSF103473	MFS general substrate transporter
PAJ_2439	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
PAJ_2441	SSF54060	His-Me finger endonucleases
PAJ_2443	SSF75217	alpha/beta knot
PAJ_2443	SSF88697	PUA domain-like
PAJ_2444	SSF52440	PreATP-grasp domain
PAJ_2444	SSF56059	Glutathione synthetase ATP-binding domain-like
PAJ_2445	SSF143456	VC0467-like
PAJ_2446	SSF53098	Ribonuclease H-like
PAJ_2447	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_2448	SSF51419	PLP-binding barrel
PAJ_2450	SSF52972	ITPase-like
PAJ_2451	SSF102114	Radical SAM enzymes
PAJ_2452	SSF46785	"Winged helix" DNA-binding domain
PAJ_2452	SSF64288	Chorismate lyase-like
PAJ_2453	SSF55804	Phoshotransferase/anion transport protein
PAJ_2457	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
PAJ_2458	SSF46689	Homeodomain-like
PAJ_2458	SSF47454	A DNA-binding domain in eukaryotic transcription factors
PAJ_2458	SSF51182	RmlC-like cupins
PAJ_2459	SSF51735	NAD(P)-binding Rossmann-fold domains
PAJ_2459	SSF56327	LDH C-terminal domain-like
PAJ_2460	SSF103473	MFS general substrate transporter
PAJ_2461	SSF48150	DNA-glycosylase
PAJ_2461	SSF55811	Nudix
PAJ_2462	SSF111148	YggX-like
PAJ_2463	SSF53955	Lysozyme-like
PAJ_2464	SSF52172	CheY-like
PAJ_2464	SSF53383	PLP-dependent transferases
PAJ_2464	SSF55904	Ornithine decarboxylase C-terminal domain
PAJ_2465	SSF50129	GroES-like
PAJ_2465	SSF51735	NAD(P)-binding Rossmann-fold domains
PAJ_2466	SSF46785	"Winged helix" DNA-binding domain
PAJ_2467	SSF63380	Riboflavin synthase domain-like
PAJ_2468	SSF46689	Homeodomain-like
PAJ_2468	SSF55136	Probable bacterial effector-binding domain
PAJ_2471	SSF46785	"Winged helix" DNA-binding domain
PAJ_2472	SSF51735	NAD(P)-binding Rossmann-fold domains
PAJ_2473	SSF46785	"Winged helix" DNA-binding domain
PAJ_2474	SSF55729	Acyl-CoA N-acyltransferases (Nat)
PAJ_2475	SSF48208	Six-hairpin glycosidases
PAJ_2476	SSF47240	Ferritin-like
PAJ_2477	SSF47240	Ferritin-like
PAJ_2479	SSF53474	alpha/beta-Hydrolases
PAJ_2480	SSF55073	Nucleotide cyclase
PAJ_2480	SSF55785	PYP-like sensor domain (PAS domain)
PAJ_2482	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
PAJ_2483	SSF55785	PYP-like sensor domain (PAS domain)
PAJ_2483	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
PAJ_2484	SSF55785	PYP-like sensor domain (PAS domain)
PAJ_2484	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
PAJ_2485	SSF55144	LigT-like
PAJ_2487	SSF51658	Xylose isomerase-like
PAJ_2488	SSF103473	MFS general substrate transporter
PAJ_2489	SSF46785	"Winged helix" DNA-binding domain
PAJ_2490	SSF103473	MFS general substrate transporter
PAJ_2491	SSF103481	Multidrug resistance efflux transporter EmrE
PAJ_2492	SSF46785	"Winged helix" DNA-binding domain
PAJ_2492	SSF53850	Periplasmic binding protein-like II
PAJ_2493	SSF53187	Zn-dependent exopeptidases
PAJ_2494	SSF103473	MFS general substrate transporter
PAJ_2497	SSF51004	C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
PAJ_2499	SSF52141	Uracil-DNA glycosylase-like
PAJ_2500	SSF55729	Acyl-CoA N-acyltransferases (Nat)
PAJ_2504	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_2506	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
PAJ_2510	SSF56349	DNA breaking-rejoining enzymes
PAJ_2511	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_2515	SSF160940	Api92-like
PAJ_2516	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
PAJ_2517	SSF51735	NAD(P)-binding Rossmann-fold domains
PAJ_2518	SSF103473	MFS general substrate transporter
PAJ_2519	SSF52402	Adenine nucleotide alpha hydrolases-like
PAJ_2519	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
PAJ_2521	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
PAJ_2522	SSF51621	Phosphoenolpyruvate/pyruvate domain
PAJ_2523	SSF51306	LexA/Signal peptidase
PAJ_2524	SSF56349	DNA breaking-rejoining enzymes
PAJ_2525	SSF53254	Phosphoglycerate mutase-like
PAJ_2526	SSF51604	Enolase C-terminal domain-like
PAJ_2526	SSF54826	Enolase N-terminal domain-like
PAJ_2527	SSF64182	DHH phosphoesterases
PAJ_2529	SSF51004	C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
PAJ_2530	SSF100879	Lesion bypass DNA polymerase (Y-family), little finger domain
PAJ_2530	SSF56672	DNA/RNA polymerases
PAJ_2531	SSF55729	Acyl-CoA N-acyltransferases (Nat)
PAJ_2532	SSF103481	Multidrug resistance efflux transporter EmrE
PAJ_2533	SSF46689	Homeodomain-like
PAJ_2533	SSF48498	Tetracyclin repressor-like, C-terminal domain
PAJ_2538	SSF46785	"Winged helix" DNA-binding domain
PAJ_2539	SSF56349	DNA breaking-rejoining enzymes
PAJ_2540	SSF54631	CBS-domain pair
PAJ_2540	SSF81606	PP2C-like
PAJ_2543	SSF55073	Nucleotide cyclase
PAJ_2544	SSF56519	Penicillin binding protein dimerisation domain
PAJ_2544	SSF56601	beta-lactamase/transpeptidase-like
PAJ_2545	SSF53167	Purine and uridine phosphorylases
PAJ_2546	SSF143856	DeoB insert domain-like
PAJ_2546	SSF53649	Alkaline phosphatase-like
PAJ_2547	SSF52418	Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain
PAJ_2547	SSF54680	Pyrimidine nucleoside phosphorylase C-terminal domain
PAJ_2548	SSF51569	Aldolase
PAJ_2549	SSF51556	Metallo-dependent hydrolases
PAJ_2550	SSF52151	FabD/lysophospholipase-like
PAJ_2552	SSF50447	Translation proteins
PAJ_2552	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_2552	SSF54980	EF-G C-terminal domain-like
PAJ_2553	SSF141571	Pentapeptide repeat-like
PAJ_2554	SSF47240	Ferritin-like
PAJ_2555	SSF51011	Glycosyl hydrolase domain
PAJ_2555	SSF51445	(Trans)glycosidases
PAJ_2555	SSF74650	Galactose mutarotase-like
PAJ_2556	SSF103473	MFS general substrate transporter
PAJ_2557	SSF47413	lambda repressor-like DNA-binding domains
PAJ_2557	SSF53822	Periplasmic binding protein-like I
PAJ_2558	SSF56281	Metallo-hydrolase/oxidoreductase
PAJ_2559	SSF161098	MetI-like
PAJ_2560	SSF53850	Periplasmic binding protein-like II
PAJ_2561	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_2562	SSF55729	Acyl-CoA N-acyltransferases (Nat)
PAJ_2562	SSF69593	Glycerol-3-phosphate (1)-acyltransferase
PAJ_2563	SSF51182	RmlC-like cupins
PAJ_2564	SSF53850	Periplasmic binding protein-like II
PAJ_2565	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_2566	SSF161098	MetI-like
PAJ_2567	SSF55729	Acyl-CoA N-acyltransferases (Nat)
PAJ_2568	SSF53850	Periplasmic binding protein-like II
PAJ_2569	SSF51679	Bacterial luciferase-like
PAJ_2570	SSF53187	Zn-dependent exopeptidases
PAJ_2570	SSF55031	Bacterial exopeptidase dimerisation domain
PAJ_2571	SSF51679	Bacterial luciferase-like
PAJ_2572	SSF53187	Zn-dependent exopeptidases
PAJ_2572	SSF55031	Bacterial exopeptidase dimerisation domain
PAJ_2574	SSF141868	EAL domain-like
PAJ_2574	SSF55073	Nucleotide cyclase
PAJ_2576	SSF49401	Bacterial adhesins
PAJ_2577	SSF49354	PapD-like
PAJ_2580	SSF103473	MFS general substrate transporter
PAJ_2583	SSF55604	Glucose permease domain IIB
PAJ_2584	SSF53822	Periplasmic binding protein-like I
PAJ_2586	SSF103473	MFS general substrate transporter
PAJ_2587	SSF51658	Xylose isomerase-like
PAJ_2587	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
PAJ_2588	SSF49482	Aromatic compound dioxygenase
PAJ_2589	SSF49482	Aromatic compound dioxygenase
PAJ_2590	SSF46785	"Winged helix" DNA-binding domain
PAJ_2590	SSF53850	Periplasmic binding protein-like II
PAJ_2591	SSF53474	alpha/beta-Hydrolases
PAJ_2591	SSF69118	AhpD-like
PAJ_2592	SSF48557	L-aspartase-like
PAJ_2593	SSF53901	Thiolase-like
PAJ_2594	SSF100950	NagB/RpiA/CoA transferase-like
PAJ_2595	SSF100950	NagB/RpiA/CoA transferase-like
PAJ_2596	SSF46785	"Winged helix" DNA-binding domain
PAJ_2596	SSF55781	GAF domain-like
PAJ_2597	SSF53383	PLP-dependent transferases
PAJ_2599	SSF46689	Homeodomain-like
PAJ_2600	SSF51430	NAD(P)-linked oxidoreductase
PAJ_2601	SSF64518	Phase 1 flagellin
PAJ_2602	SSF49503	Cupredoxins
PAJ_2603	SSF69593	Glycerol-3-phosphate (1)-acyltransferase
PAJ_2604	SSF101904	GyrA/ParC C-terminal domain-like
PAJ_2604	SSF56719	Type II DNA topoisomerase
PAJ_2605	SSF46785	"Winged helix" DNA-binding domain
PAJ_2605	SSF52794	PTS system IIB component-like
PAJ_2605	SSF63520	PTS-regulatory domain, PRD
PAJ_2606	SSF55804	Phoshotransferase/anion transport protein
PAJ_2607	SSF52794	PTS system IIB component-like
PAJ_2609	SSF51569	Aldolase
PAJ_2610	SSF53850	Periplasmic binding protein-like II
PAJ_2611	SSF52218	Flavoproteins
PAJ_2612	SSF54909	Dimeric alpha+beta barrel
PAJ_2613	SSF54211	Ribosomal protein S5 domain 2-like
PAJ_2613	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
PAJ_2613	SSF56719	Type II DNA topoisomerase
PAJ_2614	SSF53474	alpha/beta-Hydrolases
PAJ_2615	SSF56300	Metallo-dependent phosphatases
PAJ_2617	SSF55811	Nudix
PAJ_2618	SSF56954	Outer membrane efflux proteins (OEP)
PAJ_2620	SSF52440	PreATP-grasp domain
PAJ_2620	SSF56059	Glutathione synthetase ATP-binding domain-like
PAJ_2621	SSF53213	LigB-like
PAJ_2622	SSF55821	YrdC/RibB
PAJ_2624	SSF52374	Nucleotidylyl transferase
PAJ_2624	SSF53613	Ribokinase-like
PAJ_2625	SSF81301	Nucleotidyltransferase
PAJ_2625	SSF81593	Nucleotidyltransferase substrate binding subunit/domain
PAJ_2626	SSF55154	CYTH-like phosphatases
PAJ_2628	SSF81301	Nucleotidyltransferase
PAJ_2628	SSF81891	Poly A polymerase C-terminal region-like
PAJ_2630	SSF55620	Tetrahydrobiopterin biosynthesis enzymes-like
PAJ_2632	SSF53067	Actin-like ATPase domain
PAJ_2634	SSF117023	DNA primase DnaG, C-terminal domain
PAJ_2634	SSF56731	DNA primase core
PAJ_2634	SSF57783	Zinc beta-ribbon
PAJ_2635	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
PAJ_2635	SSF88946	Sigma2 domain of RNA polymerase sigma factors
PAJ_2636	SSF52141	Uracil-DNA glycosylase-like
PAJ_2640	SSF69279	Phage tail proteins
PAJ_2645	SSF46689	Homeodomain-like
PAJ_2645	SSF53041	Resolvase-like
PAJ_2647	SSF88874	Receptor-binding domain of short tail fibre protein gp12
PAJ_2650	SSF160719	gpW/gp25-like
PAJ_2653	SSF53955	Lysozyme-like
PAJ_2657	SSF57716	Glucocorticoid receptor-like (DNA-binding domain)
PAJ_2661	SSF51569	Aldolase
PAJ_2662	SSF52794	PTS system IIB component-like
PAJ_2663	SSF55804	Phoshotransferase/anion transport protein
PAJ_2664	SSF52794	PTS system IIB component-like
PAJ_2664	SSF63520	PTS-regulatory domain, PRD
PAJ_2665	SSF52091	SpoIIaa-like
PAJ_2666	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
PAJ_2668	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
PAJ_2671	SSF141868	EAL domain-like
PAJ_2671	SSF55073	Nucleotide cyclase
PAJ_2671	SSF55781	GAF domain-like
PAJ_2671	SSF55785	PYP-like sensor domain (PAS domain)
PAJ_2672	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
PAJ_2673	SSF141868	EAL domain-like
PAJ_2673	SSF55781	GAF domain-like
PAJ_2674	SSF103190	Sensory domain-like
PAJ_2674	SSF55073	Nucleotide cyclase
PAJ_2675	SSF52440	PreATP-grasp domain
PAJ_2675	SSF56059	Glutathione synthetase ATP-binding domain-like
PAJ_2676	SSF55073	Nucleotide cyclase
PAJ_2678	SSF53056	beta-carbonic anhydrase, cab
PAJ_2679	SSF56784	HAD-like
PAJ_2680	SSF64438	CNF1/YfiH-like putative cysteine hydrolases
PAJ_2681	SSF51395	FMN-linked oxidoreductases
PAJ_2681	SSF51905	FAD/NAD(P)-binding domain
PAJ_2682	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
PAJ_2684	SSF54631	CBS-domain pair
PAJ_2684	SSF81340	Clc chloride channel
PAJ_2685	SSF51735	NAD(P)-binding Rossmann-fold domains
PAJ_2685	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
PAJ_2688	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
PAJ_2688	SSF51735	NAD(P)-binding Rossmann-fold domains
PAJ_2689	SSF51556	Metallo-dependent hydrolases
PAJ_2690	SSF103473	MFS general substrate transporter
PAJ_2691	SSF46785	"Winged helix" DNA-binding domain
PAJ_2691	SSF48008	GntR ligand-binding domain-like
PAJ_2701	SSF50486	FMT C-terminal domain-like
PAJ_2701	SSF53328	Formyltransferase
PAJ_2702	SSF47616	GST C-terminal domain-like
PAJ_2702	SSF52833	Thioredoxin-like
PAJ_2704	SSF53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes
PAJ_2705	SSF74650	Galactose mutarotase-like
PAJ_2705	SSF81296	E set domains
PAJ_2706	SSF53790	Tetrapyrrole methylase
PAJ_2707	SSF53822	Periplasmic binding protein-like I
PAJ_2708	SSF52980	Restriction endonuclease-like
PAJ_2709	SSF53697	SIS domain
PAJ_2711	SSF51182	RmlC-like cupins
PAJ_2712	SSF46785	"Winged helix" DNA-binding domain
PAJ_2712	SSF53850	Periplasmic binding protein-like II
PAJ_2713	SSF52794	PTS system IIB component-like
PAJ_2713	SSF55804	Phoshotransferase/anion transport protein
PAJ_2713	SSF63520	PTS-regulatory domain, PRD
PAJ_2714	SSF51569	Aldolase
PAJ_2715	SSF53383	PLP-dependent transferases
PAJ_2716	SSF51338	Composite domain of metallo-dependent hydrolases
PAJ_2716	SSF51556	Metallo-dependent hydrolases
PAJ_2719	SSF103473	MFS general substrate transporter
PAJ_2720	SSF103473	MFS general substrate transporter
PAJ_2722	SSF51011	Glycosyl hydrolase domain
PAJ_2722	SSF51445	(Trans)glycosidases
PAJ_2722	SSF74650	Galactose mutarotase-like
PAJ_2723	SSF74650	Galactose mutarotase-like
PAJ_2724	SSF48208	Six-hairpin glycosidases
PAJ_2725	SSF51569	Aldolase
PAJ_2726	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
PAJ_2726	SSF51735	NAD(P)-binding Rossmann-fold domains
PAJ_2727	SSF53613	Ribokinase-like
PAJ_2728	SSF100950	NagB/RpiA/CoA transferase-like
PAJ_2728	SSF46785	"Winged helix" DNA-binding domain
PAJ_2729	SSF47175	Cytochromes
PAJ_2730	SSF111283	Putative modulator of DNA gyrase, PmbA/TldD
PAJ_2731	SSF158710	PSPTO4464-like
PAJ_2732	SSF51984	MurCD N-terminal domain
PAJ_2732	SSF53244	MurD-like peptide ligases, peptide-binding domain
PAJ_2732	SSF53623	MurD-like peptide ligases, catalytic domain
PAJ_2733	SSF56655	Carbohydrate phosphatase
PAJ_2734	SSF47170	Aspartate receptor, ligand-binding domain
PAJ_2734	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
PAJ_2736	SSF50324	Inorganic pyrophosphatase
PAJ_2738	SSF110857	Gamma-glutamyl cyclotransferase-like
PAJ_2741	SSF54631	CBS-domain pair
PAJ_2741	SSF56176	FAD-binding/transporter-associated domain-like
PAJ_2744	SSF56655	Carbohydrate phosphatase
PAJ_2745	SSF55816	5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain
PAJ_2745	SSF56300	Metallo-dependent phosphatases
PAJ_2746	SSF54534	FKBP-like
PAJ_2748	SSF55653	Ribosomal protein L9 C-domain
PAJ_2748	SSF55658	L9 N-domain-like
PAJ_2749	SSF46911	Ribosomal protein S18
PAJ_2750	SSF50249	Nucleic acid-binding proteins
PAJ_2751	SSF54995	Ribosomal protein S6
PAJ_2752	SSF53474	alpha/beta-Hydrolases
PAJ_2753	SSF103190	Sensory domain-like
PAJ_2753	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
PAJ_2754	SSF159871	YdgH-like
PAJ_2755	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
PAJ_2755	SSF56645	Acyl-CoA dehydrogenase NM domain-like
PAJ_2756	SSF75217	alpha/beta knot
PAJ_2757	SSF50249	Nucleic acid-binding proteins
PAJ_2758	SSF46785	"Winged helix" DNA-binding domain
PAJ_2759	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_2761	SSF117892	Band 7/SPFH domain
PAJ_2762	SSF117892	Band 7/SPFH domain
PAJ_2763	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_2763	SSF54980	EF-G C-terminal domain-like
PAJ_2764	SSF50182	Sm-like ribonucleoproteins
PAJ_2765	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_2766	SSF118116	DNA mismatch repair protein MutL
PAJ_2766	SSF54211	Ribosomal protein S5 domain 2-like
PAJ_2766	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
PAJ_2767	SSF53187	Zn-dependent exopeptidases
PAJ_2767	SSF54106	LysM domain
PAJ_2768	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_2769	SSF53613	Ribokinase-like
PAJ_2769	SSF64153	YjeF N-terminal domain-like
PAJ_2770	SSF46548	alpha-helical ferredoxin
PAJ_2771	SSF53098	Ribonuclease H-like
PAJ_2772	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_2774	SSF50182	Sm-like ribonucleoproteins
PAJ_2774	SSF82689	Mechanosensitive channel protein MscS (YggB), C-terminal domain
PAJ_2774	SSF82861	Mechanosensitive channel protein MscS (YggB), transmembrane region
PAJ_2775	SSF51735	NAD(P)-binding Rossmann-fold domains
PAJ_2775	SSF56327	LDH C-terminal domain-like
PAJ_2776	SSF46785	"Winged helix" DNA-binding domain
PAJ_2776	SSF55252	C-terminal domain of arginine repressor
PAJ_2777	SSF159871	YdgH-like
PAJ_2780	SSF53720	ALDH-like
PAJ_2782	SSF111369	HlyD-like secretion proteins
PAJ_2784	SSF46785	"Winged helix" DNA-binding domain
PAJ_2784	SSF53850	Periplasmic binding protein-like II
PAJ_2785	SSF111283	Putative modulator of DNA gyrase, PmbA/TldD
PAJ_2787	SSF50249	Nucleic acid-binding proteins
PAJ_2788	SSF52972	ITPase-like
PAJ_2791	SSF53067	Actin-like ATPase domain
PAJ_2792	SSF141868	EAL domain-like
PAJ_2792	SSF55073	Nucleotide cyclase
PAJ_2793	SSF56524	Oxidoreductase molybdopterin-binding domain
PAJ_2795	SSF52304	Type II 3-dehydroquinate dehydratase
PAJ_2796	SSF51230	Single hybrid motif
PAJ_2797	SSF51246	Rudiment single hybrid motif
PAJ_2797	SSF52440	PreATP-grasp domain
PAJ_2797	SSF56059	Glutathione synthetase ATP-binding domain-like
PAJ_2800	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
PAJ_2801	SSF51395	FMN-linked oxidoreductases
PAJ_2802	SSF46689	Homeodomain-like
PAJ_2803	SSF53850	Periplasmic binding protein-like II
PAJ_2804	SSF161098	MetI-like
PAJ_2805	SSF161098	MetI-like
PAJ_2806	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_2807	SSF51161	Trimeric LpxA-like enzymes
PAJ_2808	SSF51735	NAD(P)-binding Rossmann-fold domains
PAJ_2808	SSF53223	Aminoacid dehydrogenase-like, N-terminal domain
PAJ_2809	SSF55821	YrdC/RibB
PAJ_2810	SSF57783	Zinc beta-ribbon
PAJ_2812	SSF102405	MCP/YpsA-like
PAJ_2813	SSF56420	Peptide deformylase
PAJ_2814	SSF50486	FMT C-terminal domain-like
PAJ_2814	SSF53328	Formyltransferase
PAJ_2815	SSF48013	NusB-like
PAJ_2815	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
PAJ_2816	SSF116726	TrkA C-terminal domain-like
PAJ_2816	SSF51735	NAD(P)-binding Rossmann-fold domains
PAJ_2817	SSF81330	Gated mechanosensitive channel
PAJ_2820	SSF64263	Prokaryotic ribosomal protein L17
PAJ_2821	SSF47789	C-terminal domain of RNA polymerase alpha subunit
PAJ_2821	SSF55257	RBP11-like subunits of RNA polymerase
PAJ_2821	SSF56553	Insert subdomain of RNA polymerase alpha subunit
PAJ_2822	SSF55174	Alpha-L RNA-binding motif
PAJ_2823	SSF53137	Translational machinery components
PAJ_2824	SSF46946	S13-like H2TH domain
PAJ_2825	SSF57840	Ribosomal protein L36
PAJ_2826	SSF103491	Preprotein translocase SecY subunit
PAJ_2827	SSF52080	Ribosomal proteins L15p and L18e
PAJ_2828	SSF55129	Ribosomal protein L30p/L7e
PAJ_2829	SSF54211	Ribosomal protein S5 domain 2-like
PAJ_2829	SSF54768	dsRNA-binding domain-like
PAJ_2830	SSF53137	Translational machinery components
PAJ_2832	SSF56053	Ribosomal protein L6
PAJ_2833	SSF56047	Ribosomal protein S8
PAJ_2834	SSF57716	Glucocorticoid receptor-like (DNA-binding domain)
PAJ_2835	SSF55282	RL5-like
PAJ_2836	SSF50104	Translation proteins SH3-like domain
PAJ_2837	SSF50193	Ribosomal protein L14
PAJ_2838	SSF50249	Nucleic acid-binding proteins
PAJ_2839	SSF46561	Ribosomal protein L29 (L29p)
PAJ_2840	SSF54686	Ribosomal protein L16p/L10e
PAJ_2841	SSF54814	Prokaryotic type KH domain (KH-domain type II)
PAJ_2841	SSF54821	Ribosomal protein S3 C-terminal domain
PAJ_2842	SSF54843	Ribosomal protein L22
PAJ_2843	SSF54570	Ribosomal protein S19
PAJ_2845	SSF50104	Translation proteins SH3-like domain
PAJ_2845	SSF50249	Nucleic acid-binding proteins
PAJ_2846	SSF54189	Ribosomal proteins S24e, L23 and L15e
PAJ_2847	SSF52166	Ribosomal protein L4
PAJ_2848	SSF50447	Translation proteins
PAJ_2849	SSF54999	Ribosomal protein S10
PAJ_2851	SSF47240	Ferritin-like
PAJ_2853	SSF50447	Translation proteins
PAJ_2853	SSF50465	EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
PAJ_2853	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_2854	SSF50447	Translation proteins
PAJ_2854	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_2854	SSF54211	Ribosomal protein S5 domain 2-like
PAJ_2854	SSF54980	EF-G C-terminal domain-like
PAJ_2855	SSF47973	Ribosomal protein S7
PAJ_2856	SSF50249	Nucleic acid-binding proteins
PAJ_2857	SSF75169	DsrEFH-like
PAJ_2858	SSF75169	DsrEFH-like
PAJ_2859	SSF75169	DsrEFH-like
PAJ_2861	SSF54534	FKBP-like
PAJ_2863	SSF54534	FKBP-like
PAJ_2865	SSF51735	NAD(P)-binding Rossmann-fold domains
PAJ_2866	SSF52218	Flavoproteins
PAJ_2867	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_2868	SSF51197	Clavaminate synthase-like
PAJ_2869	SSF161098	MetI-like
PAJ_2870	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_2871	SSF53850	Periplasmic binding protein-like II
PAJ_2872	SSF47413	lambda repressor-like DNA-binding domains
PAJ_2872	SSF53822	Periplasmic binding protein-like I
PAJ_2874	SSF53474	alpha/beta-Hydrolases
PAJ_2875	SSF118001	YehU-like
PAJ_2876	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_2877	SSF82784	OsmC-like
PAJ_2878	SSF46785	"Winged helix" DNA-binding domain
PAJ_2878	SSF51206	cAMP-binding domain-like
PAJ_2880	SSF53383	PLP-dependent transferases
PAJ_2881	SSF52317	Class I glutamine amidotransferase-like
PAJ_2882	SSF140931	Fic-like
PAJ_2884	SSF50891	Cyclophilin-like
PAJ_2885	SSF103473	MFS general substrate transporter
PAJ_2886	SSF51556	Metallo-dependent hydrolases
PAJ_2887	SSF52374	Nucleotidylyl transferase
PAJ_2888	SSF56784	HAD-like
PAJ_2889	SSF51366	Ribulose-phoshate binding barrel
PAJ_2890	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
PAJ_2891	SSF110997	Sporulation related repeat
PAJ_2892	SSF56796	Dehydroquinate synthase-like
PAJ_2893	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_2897	SSF53067	Actin-like ATPase domain
PAJ_2898	SSF53955	Lysozyme-like
PAJ_2898	SSF56601	beta-lactamase/transpeptidase-like
PAJ_2899	SSF55811	Nudix
PAJ_2901	SSF56784	HAD-like
PAJ_2902	SSF55174	Alpha-L RNA-binding motif
PAJ_2903	SSF118352	HSP33 redox switch-like
PAJ_2903	SSF64397	Hsp33 domain
PAJ_2904	SSF53795	PEP carboxykinase-like
PAJ_2904	SSF68923	PEP carboxykinase N-terminal domain
PAJ_2905	SSF47384	Homodimeric domain of signal transducing histidine kinase
PAJ_2905	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
PAJ_2906	SSF46894	C-terminal effector domain of the bipartite response regulators
PAJ_2906	SSF52172	CheY-like
PAJ_2908	SSF46557	GreA transcript cleavage protein, N-terminal domain
PAJ_2908	SSF54534	FKBP-like
PAJ_2909	SSF158832	Tex N-terminal region-like
PAJ_2909	SSF47781	RuvA domain 2-like
PAJ_2909	SSF50249	Nucleic acid-binding proteins
PAJ_2909	SSF53098	Ribonuclease H-like
PAJ_2910	SSF51445	(Trans)glycosidases
PAJ_2911	SSF159871	YdgH-like
PAJ_2912	SSF53474	alpha/beta-Hydrolases
PAJ_2913	SSF53271	PRTase-like
PAJ_2914	SSF117916	Fe-S cluster assembly (FSCA) domain-like
PAJ_2914	SSF89360	HesB-like domain
PAJ_2915	SSF51445	(Trans)glycosidases
PAJ_2916	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
PAJ_2917	SSF100950	NagB/RpiA/CoA transferase-like
PAJ_2918	SSF144091	Rhomboid-like
PAJ_2919	SSF52821	Rhodanese/Cell cycle control phosphatase
PAJ_2920	SSF51905	FAD/NAD(P)-binding domain
PAJ_2920	SSF54373	FAD-linked reductases, C-terminal domain
PAJ_2921	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
PAJ_2922	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
PAJ_2923	SSF51161	Trimeric LpxA-like enzymes
PAJ_2923	SSF53448	Nucleotide-diphospho-sugar transferases
PAJ_2924	SSF51445	(Trans)glycosidases
PAJ_2924	SSF81296	E set domains
PAJ_2925	SSF51011	Glycosyl hydrolase domain
PAJ_2925	SSF51445	(Trans)glycosidases
PAJ_2925	SSF81296	E set domains
PAJ_2926	SSF51735	NAD(P)-binding Rossmann-fold domains
PAJ_2926	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
PAJ_2929	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_2930	SSF47413	lambda repressor-like DNA-binding domains
PAJ_2930	SSF53822	Periplasmic binding protein-like I
PAJ_2931	SSF51182	RmlC-like cupins
PAJ_2932	SSF55729	Acyl-CoA N-acyltransferases (Nat)
PAJ_2933	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
PAJ_2935	SSF51695	PLC-like phosphodiesterases
PAJ_2936	SSF50331	MOP-like
PAJ_2936	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_2937	SSF161098	MetI-like
PAJ_2938	SSF161098	MetI-like
PAJ_2939	SSF53850	Periplasmic binding protein-like II
PAJ_2940	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_2941	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_2944	SSF53822	Periplasmic binding protein-like I
PAJ_2945	SSF55729	Acyl-CoA N-acyltransferases (Nat)
PAJ_2946	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
PAJ_2946	SSF88946	Sigma2 domain of RNA polymerase sigma factors
PAJ_2948	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_2949	SSF47364	Domain of the SRP/SRP receptor G-proteins
PAJ_2949	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_2950	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
PAJ_2954	SSF55008	HMA, heavy metal-associated domain
PAJ_2954	SSF56784	HAD-like
PAJ_2954	SSF81653	Calcium ATPase, transduction domain A
PAJ_2954	SSF81665	Calcium ATPase, transmembrane domain M
PAJ_2955	SSF64307	SirA-like
PAJ_2957	SSF55724	Mog1p/PsbP-like
PAJ_2958	SSF53613	Ribokinase-like
PAJ_2959	SSF52467	DHS-like NAD/FAD-binding domain
PAJ_2959	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
PAJ_2960	SSF51735	NAD(P)-binding Rossmann-fold domains
PAJ_2960	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
PAJ_2961	SSF51658	Xylose isomerase-like
PAJ_2962	SSF46689	Homeodomain-like
PAJ_2962	SSF53697	SIS domain
PAJ_2963	SSF51182	RmlC-like cupins
PAJ_2964	SSF53720	ALDH-like
PAJ_2967	SSF46785	"Winged helix" DNA-binding domain
PAJ_2967	SSF48008	GntR ligand-binding domain-like
PAJ_2968	SSF51658	Xylose isomerase-like
PAJ_2969	SSF141868	EAL domain-like
PAJ_2970	SSF103473	MFS general substrate transporter
PAJ_2970	SSF103661	Proline/betaine transporter ProP, C-terminal cytoplasmic domain
PAJ_2971	SSF51569	Aldolase
PAJ_2972	SSF46689	Homeodomain-like
PAJ_2974	SSF51735	NAD(P)-binding Rossmann-fold domains
PAJ_2976	SSF46689	Homeodomain-like
PAJ_2977	SSF55166	Hedgehog/DD-peptidase
PAJ_2978	SSF53850	Periplasmic binding protein-like II
PAJ_2979	SSF161098	MetI-like
PAJ_2980	SSF161098	MetI-like
PAJ_2981	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_2982	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_2983	SSF51905	FAD/NAD(P)-binding domain
PAJ_2983	SSF54373	FAD-linked reductases, C-terminal domain
PAJ_2984	SSF160996	HI0933 insert domain-like
PAJ_2984	SSF51905	FAD/NAD(P)-binding domain
PAJ_2987	SSF52402	Adenine nucleotide alpha hydrolases-like
PAJ_2988	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
PAJ_2989	SSF55486	Metalloproteases ("zincins"), catalytic domain
PAJ_2990	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
PAJ_2992	SSF56281	Metallo-hydrolase/oxidoreductase
PAJ_2993	SSF51905	FAD/NAD(P)-binding domain
PAJ_2993	SSF55424	FAD/NAD-linked reductases, dimerisation (C-terminal) domain
PAJ_2994	SSF53067	Actin-like ATPase domain
PAJ_2995	SSF56655	Carbohydrate phosphatase
PAJ_2996	SSF50331	MOP-like
PAJ_2996	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_2997	SSF161098	MetI-like
PAJ_2998	SSF161098	MetI-like
PAJ_2999	SSF53850	Periplasmic binding protein-like II
PAJ_3000	SSF51695	PLC-like phosphodiesterases
PAJ_3001	SSF56935	Porins
PAJ_3002	SSF53474	alpha/beta-Hydrolases
PAJ_3004	SSF103473	MFS general substrate transporter
PAJ_3005	SSF46785	"Winged helix" DNA-binding domain
PAJ_3005	SSF53850	Periplasmic binding protein-like II
PAJ_3007	SSF47384	Homodimeric domain of signal transducing histidine kinase
PAJ_3007	SSF55781	GAF domain-like
PAJ_3007	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
PAJ_3009	SSF56784	HAD-like
PAJ_3009	SSF81653	Calcium ATPase, transduction domain A
PAJ_3009	SSF81660	Metal cation-transporting ATPase, ATP-binding domain N
PAJ_3009	SSF81665	Calcium ATPase, transmembrane domain M
PAJ_3011	SSF109604	HD-domain/PDEase-like
PAJ_3012	SSF55729	Acyl-CoA N-acyltransferases (Nat)
PAJ_3013	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_3013	SSF90123	ABC transporter transmembrane region
PAJ_3014	SSF51658	Xylose isomerase-like
PAJ_3014	SSF55729	Acyl-CoA N-acyltransferases (Nat)
PAJ_3015	SSF53474	alpha/beta-Hydrolases
PAJ_3017	SSF53590	Nucleoside hydrolase
PAJ_3018	SSF50129	GroES-like
PAJ_3018	SSF51735	NAD(P)-binding Rossmann-fold domains
PAJ_3019	SSF46785	"Winged helix" DNA-binding domain
PAJ_3019	SSF48008	GntR ligand-binding domain-like
PAJ_3020	SSF103473	MFS general substrate transporter
PAJ_3022	SSF53474	alpha/beta-Hydrolases
PAJ_3023	SSF56529	FAH
PAJ_3025	SSF51905	FAD/NAD(P)-binding domain
PAJ_3027	SSF53383	PLP-dependent transferases
PAJ_3028	SSF47616	GST C-terminal domain-like
PAJ_3028	SSF52833	Thioredoxin-like
PAJ_3029	SSF54506	Diaminopimelate epimerase-like
PAJ_3030	SSF51735	NAD(P)-binding Rossmann-fold domains
PAJ_3031	SSF46785	"Winged helix" DNA-binding domain
PAJ_3031	SSF53850	Periplasmic binding protein-like II
PAJ_3033	SSF103473	MFS general substrate transporter
PAJ_3034	SSF46785	"Winged helix" DNA-binding domain
PAJ_3034	SSF53850	Periplasmic binding protein-like II
PAJ_3035	SSF53850	Periplasmic binding protein-like II
PAJ_3038	SSF51735	NAD(P)-binding Rossmann-fold domains
PAJ_3039	SSF56059	Glutathione synthetase ATP-binding domain-like
PAJ_3040	SSF103473	MFS general substrate transporter
PAJ_3041	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
PAJ_3041	SSF51735	NAD(P)-binding Rossmann-fold domains
PAJ_3042	SSF46785	"Winged helix" DNA-binding domain
PAJ_3042	SSF53850	Periplasmic binding protein-like II
PAJ_3043	SSF53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes
PAJ_3043	SSF55021	ACT-like
PAJ_3044	SSF143975	IlvD/EDD N-terminal domain-like
PAJ_3044	SSF52016	LeuD/IlvD-like
PAJ_3045	SSF56752	D-aminoacid aminotransferase-like PLP-dependent enzymes
PAJ_3046	SSF55021	ACT-like
PAJ_3047	SSF52467	DHS-like NAD/FAD-binding domain
PAJ_3047	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
PAJ_3048	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_3048	SSF54211	Ribosomal protein S5 domain 2-like
PAJ_3050	SSF53850	Periplasmic binding protein-like II
PAJ_3051	SSF53681	Aspartate/glutamate racemase
PAJ_3052	SSF56935	Porins
PAJ_3053	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
PAJ_3055	SSF46689	Homeodomain-like
PAJ_3056	SSF51905	FAD/NAD(P)-binding domain
PAJ_3056	SSF55424	FAD/NAD-linked reductases, dimerisation (C-terminal) domain
PAJ_3057	SSF46785	"Winged helix" DNA-binding domain
PAJ_3057	SSF53850	Periplasmic binding protein-like II
PAJ_3058	SSF48557	L-aspartase-like
PAJ_3059	SSF52402	Adenine nucleotide alpha hydrolases-like
PAJ_3059	SSF69864	Argininosuccinate synthetase, C-terminal domain
PAJ_3060	SSF53633	Carbamate kinase-like
PAJ_3061	SSF51735	NAD(P)-binding Rossmann-fold domains
PAJ_3061	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
PAJ_3062	SSF53187	Zn-dependent exopeptidases
PAJ_3062	SSF55031	Bacterial exopeptidase dimerisation domain
PAJ_3063	SSF51621	Phosphoenolpyruvate/pyruvate domain
PAJ_3064	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
PAJ_3065	SSF51730	FAD-linked oxidoreductase
PAJ_3066	SSF51735	NAD(P)-binding Rossmann-fold domains
PAJ_3066	SSF53633	Carbamate kinase-like
PAJ_3066	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
PAJ_3067	SSF53383	PLP-dependent transferases
PAJ_3068	SSF47598	Ribbon-helix-helix
PAJ_3069	SSF143800	L28p-like
PAJ_3070	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_3071	SSF47413	lambda repressor-like DNA-binding domains
PAJ_3071	SSF53822	Periplasmic binding protein-like I
PAJ_3072	SSF110997	Sporulation related repeat
PAJ_3073	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
PAJ_3074	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_3075	SSF89562	RraA-like
PAJ_3077	SSF81338	Aquaporin-like
PAJ_3078	SSF53067	Actin-like ATPase domain
PAJ_3079	SSF56655	Carbohydrate phosphatase
PAJ_3080	SSF103473	MFS general substrate transporter
PAJ_3081	SSF52343	Ferredoxin reductase-like, C-terminal NADP-linked domain
PAJ_3081	SSF63380	Riboflavin synthase domain-like
PAJ_3084	SSF51351	Triosephosphate isomerase (TIM)
PAJ_3085	SSF54197	HIT-like
PAJ_3086	SSF53850	Periplasmic binding protein-like II
PAJ_3087	SSF53784	Phosphofructokinase
PAJ_3088	SSF160240	Cation efflux protein cytoplasmic domain-like
PAJ_3088	SSF161111	Cation efflux protein transmembrane domain-like
PAJ_3091	SSF46894	C-terminal effector domain of the bipartite response regulators
PAJ_3091	SSF52172	CheY-like
PAJ_3092	SSF47384	Homodimeric domain of signal transducing histidine kinase
PAJ_3092	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
PAJ_3093	SSF75217	alpha/beta knot
PAJ_3094	SSF51161	Trimeric LpxA-like enzymes
PAJ_3095	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
PAJ_3095	SSF51735	NAD(P)-binding Rossmann-fold domains
PAJ_3096	SSF54611	SecB-like
PAJ_3098	SSF52833	Thioredoxin-like
PAJ_3099	SSF52821	Rhodanese/Cell cycle control phosphatase
PAJ_3100	SSF51261	Duplicated hybrid motif
PAJ_3101	SSF88713	Glycoside hydrolase/deacetylase
PAJ_3102	SSF50129	GroES-like
PAJ_3102	SSF51735	NAD(P)-binding Rossmann-fold domains
PAJ_3103	SSF53383	PLP-dependent transferases
PAJ_3104	SSF51735	NAD(P)-binding Rossmann-fold domains
PAJ_3105	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
PAJ_3106	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
PAJ_3107	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
PAJ_3109	SSF53448	Nucleotide-diphospho-sugar transferases
PAJ_3110	SSF88713	Glycoside hydrolase/deacetylase
PAJ_3111	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
PAJ_3112	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
PAJ_3113	SSF53448	Nucleotide-diphospho-sugar transferases
PAJ_3114	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
PAJ_3115	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
PAJ_3116	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
PAJ_3117	SSF53448	Nucleotide-diphospho-sugar transferases
PAJ_3118	SSF52374	Nucleotidylyl transferase
PAJ_3119	SSF46946	S13-like H2TH domain
PAJ_3119	SSF57716	Glucocorticoid receptor-like (DNA-binding domain)
PAJ_3119	SSF81624	N-terminal domain of MutM-like DNA repair proteins
PAJ_3120	SSF57829	Zn-binding ribosomal proteins
PAJ_3121	SSF143800	L28p-like
PAJ_3122	SSF102712	JAB1/MPN domain
PAJ_3122	SSF47781	RuvA domain 2-like
PAJ_3123	SSF102645	CoaB-like
PAJ_3123	SSF52507	Homo-oligomeric flavin-containing Cys decarboxylases, HFCD
PAJ_3124	SSF51283	dUTPase-like
PAJ_3125	SSF46689	Homeodomain-like
PAJ_3125	SSF48498	Tetracyclin repressor-like, C-terminal domain
PAJ_3126	SSF53271	PRTase-like
PAJ_3127	SSF54211	Ribosomal protein S5 domain 2-like
PAJ_3127	SSF55666	Ribonuclease PH domain 2-like
PAJ_3132	SSF81606	PP2C-like
PAJ_3133	SSF56112	Protein kinase-like (PK-like)
PAJ_3134	SSF50249	Nucleic acid-binding proteins
PAJ_3134	SSF56112	Protein kinase-like (PK-like)
PAJ_3138	SSF47781	RuvA domain 2-like
PAJ_3138	SSF50249	Nucleic acid-binding proteins
PAJ_3138	SSF56091	DNA ligase/mRNA capping enzyme, catalytic domain
PAJ_3139	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_3140	SSF63562	RPB6/omega subunit-like
PAJ_3141	SSF109604	HD-domain/PDEase-like
PAJ_3141	SSF55021	ACT-like
PAJ_3141	SSF81271	TGS-like
PAJ_3141	SSF81301	Nucleotidyltransferase
PAJ_3143	SSF75217	alpha/beta knot
PAJ_3144	SSF50249	Nucleic acid-binding proteins
PAJ_3144	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_3147	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
PAJ_3147	SSF55729	Acyl-CoA N-acyltransferases (Nat)
PAJ_3148	SSF69500	DTD-like
PAJ_3150	SSF56784	HAD-like
PAJ_3151	SSF50447	Translation proteins
PAJ_3151	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_3151	SSF54980	EF-G C-terminal domain-like
PAJ_3152	SSF54368	Glutamine synthetase, N-terminal domain
PAJ_3152	SSF55931	Glutamine synthetase/guanido kinase
PAJ_3153	SSF47384	Homodimeric domain of signal transducing histidine kinase
PAJ_3153	SSF55785	PYP-like sensor domain (PAS domain)
PAJ_3153	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
PAJ_3154	SSF46689	Homeodomain-like
PAJ_3154	SSF52172	CheY-like
PAJ_3154	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_3155	SSF102114	Radical SAM enzymes
PAJ_3157	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_3158	SSF47807	5' to 3' exonuclease, C-terminal subdomain
PAJ_3158	SSF53098	Ribonuclease H-like
PAJ_3158	SSF56672	DNA/RNA polymerases
PAJ_3158	SSF88723	PIN domain-like
PAJ_3159	SSF52833	Thioredoxin-like
PAJ_3160	SSF56112	Protein kinase-like (PK-like)
PAJ_3162	SSF53448	Nucleotide-diphospho-sugar transferases
PAJ_3163	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_3165	SSF103473	MFS general substrate transporter
PAJ_3166	SSF47413	lambda repressor-like DNA-binding domains
PAJ_3166	SSF53822	Periplasmic binding protein-like I
PAJ_3167	SSF53613	Ribokinase-like
PAJ_3168	SSF53822	Periplasmic binding protein-like I
PAJ_3170	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_3172	SSF102546	RbsD-like
PAJ_3173	SSF101756	Hypothetical protein YgiW
PAJ_3174	SSF52172	CheY-like
PAJ_3175	SSF47384	Homodimeric domain of signal transducing histidine kinase
PAJ_3175	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
PAJ_3177	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_3178	SSF53300	vWA-like
PAJ_3179	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
PAJ_3179	SSF56436	C-type lectin-like
PAJ_3180	SSF46785	"Winged helix" DNA-binding domain
PAJ_3180	SSF54909	Dimeric alpha+beta barrel
PAJ_3181	SSF52218	Flavoproteins
PAJ_3182	SSF51905	FAD/NAD(P)-binding domain
PAJ_3183	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
PAJ_3185	SSF81336	F1F0 ATP synthase subunit A
PAJ_3186	SSF81333	F1F0 ATP synthase subunit C
PAJ_3187	SSF81573	F1F0 ATP synthase subunit B, membrane domain
PAJ_3188	SSF47928	N-terminal domain of the delta subunit of the F1F0-ATP synthase
PAJ_3189	SSF47917	C-terminal domain of alpha and beta subunits of F1 ATP synthase
PAJ_3189	SSF50615	N-terminal domain of alpha and beta subunits of F1 ATP synthase
PAJ_3189	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_3191	SSF52943	ATP synthase (F1-ATPase), gamma subunit
PAJ_3192	SSF47917	C-terminal domain of alpha and beta subunits of F1 ATP synthase
PAJ_3192	SSF50615	N-terminal domain of alpha and beta subunits of F1 ATP synthase
PAJ_3192	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_3193	SSF46604	Epsilon subunit of F1F0-ATP synthase C-terminal domain
PAJ_3193	SSF51344	Epsilon subunit of F1F0-ATP synthase N-terminal domain
PAJ_3194	SSF51161	Trimeric LpxA-like enzymes
PAJ_3194	SSF53448	Nucleotide-diphospho-sugar transferases
PAJ_3195	SSF53697	SIS domain
PAJ_3195	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
PAJ_3196	SSF53850	Periplasmic binding protein-like II
PAJ_3197	SSF161098	MetI-like
PAJ_3198	SSF161098	MetI-like
PAJ_3199	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_3200	SSF109755	PhoU-like
PAJ_3201	SSF103473	MFS general substrate transporter
PAJ_3202	SSF53067	Actin-like ATPase domain
PAJ_3203	SSF51658	Xylose isomerase-like
PAJ_3204	SSF53822	Periplasmic binding protein-like I
PAJ_3205	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_3207	SSF46689	Homeodomain-like
PAJ_3207	SSF53822	Periplasmic binding protein-like I
PAJ_3208	SSF55729	Acyl-CoA N-acyltransferases (Nat)
PAJ_3209	SSF74650	Galactose mutarotase-like
PAJ_3210	SSF53822	Periplasmic binding protein-like I
PAJ_3211	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_3213	SSF46689	Homeodomain-like
PAJ_3213	SSF53697	SIS domain
PAJ_3214	SSF82784	OsmC-like
PAJ_3215	SSF103473	MFS general substrate transporter
PAJ_3216	SSF48613	Heme oxygenase-like
PAJ_3217	SSF55785	PYP-like sensor domain (PAS domain)
PAJ_3217	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
PAJ_3218	SSF46785	"Winged helix" DNA-binding domain
PAJ_3218	SSF53850	Periplasmic binding protein-like II
PAJ_3219	SSF53850	Periplasmic binding protein-like II
PAJ_3220	SSF103473	MFS general substrate transporter
PAJ_3221	SSF56935	Porins
PAJ_3222	SSF46973	Enzyme IIa from lactose specific PTS, IIa-lac
PAJ_3223	SSF51445	(Trans)glycosidases
PAJ_3225	SSF52794	PTS system IIB component-like
PAJ_3226	SSF47413	lambda repressor-like DNA-binding domains
PAJ_3226	SSF53822	Periplasmic binding protein-like I
PAJ_3227	SSF46785	"Winged helix" DNA-binding domain
PAJ_3227	SSF53067	Actin-like ATPase domain
PAJ_3228	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_3231	SSF48150	DNA-glycosylase
PAJ_3232	SSF103088	OmpA-like
PAJ_3233	SSF47413	lambda repressor-like DNA-binding domains
PAJ_3233	SSF53822	Periplasmic binding protein-like I
PAJ_3234	SSF47413	lambda repressor-like DNA-binding domains
PAJ_3234	SSF53822	Periplasmic binding protein-like I
PAJ_3235	SSF51658	Xylose isomerase-like
PAJ_3236	SSF53613	Ribokinase-like
PAJ_3237	SSF103473	MFS general substrate transporter
PAJ_3238	SSF51735	NAD(P)-binding Rossmann-fold domains
PAJ_3238	SSF52283	Formate/glycerate dehydrogenase catalytic domain-like
PAJ_3239	SSF53383	PLP-dependent transferases
PAJ_3240	SSF103481	Multidrug resistance efflux transporter EmrE
PAJ_3241	SSF51556	Metallo-dependent hydrolases
PAJ_3243	SSF49764	HSP20-like chaperones
PAJ_3245	SSF82171	DPP6 N-terminal domain-like
PAJ_3247	SSF56784	HAD-like
PAJ_3248	SSF54211	Ribosomal protein S5 domain 2-like
PAJ_3248	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
PAJ_3248	SSF56719	Type II DNA topoisomerase
PAJ_3249	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_3250	SSF55979	DNA clamp
PAJ_3251	SSF48295	TrpR-like
PAJ_3251	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_3253	SSF54211	Ribosomal protein S5 domain 2-like
PAJ_3255	SSF116878	TrmE connector domain
PAJ_3255	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_3256	SSF55469	FMN-dependent nitroreductase-like
PAJ_3257	SSF56214	4'-phosphopantetheinyl transferase
PAJ_3259	SSF56784	HAD-like
PAJ_3261	SSF55681	Class II aaRS and biotin synthetases
PAJ_3262	SSF109604	HD-domain/PDEase-like
PAJ_3265	SSF56925	OMPA-like
PAJ_3266	SSF47616	GST C-terminal domain-like
PAJ_3266	SSF52833	Thioredoxin-like
PAJ_3267	SSF144020	FdhE-like
PAJ_3268	SSF53927	Cytidine deaminase-like
PAJ_3269	SSF46609	Fe,Mn superoxide dismutase (SOD), N-terminal domain
PAJ_3269	SSF54719	Fe,Mn superoxide dismutase (SOD), C-terminal domain
PAJ_3272	SSF158668	MtlR-like
PAJ_3273	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
PAJ_3273	SSF51735	NAD(P)-binding Rossmann-fold domains
PAJ_3274	SSF52794	PTS system IIB component-like
PAJ_3274	SSF55804	Phoshotransferase/anion transport protein
PAJ_3276	SSF47413	lambda repressor-like DNA-binding domains
PAJ_3278	SSF53383	PLP-dependent transferases
PAJ_3279	SSF109604	HD-domain/PDEase-like
PAJ_3280	SSF46785	"Winged helix" DNA-binding domain
PAJ_3281	SSF53649	Alkaline phosphatase-like
PAJ_3282	SSF53850	Periplasmic binding protein-like II
PAJ_3283	SSF161098	MetI-like
PAJ_3284	SSF161098	MetI-like
PAJ_3285	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_3286	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_3288	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_3289	SSF141371	PilZ domain-like
PAJ_3289	SSF53448	Nucleotide-diphospho-sugar transferases
PAJ_3291	SSF48452	TPR-like
PAJ_3292	SSF48208	Six-hairpin glycosidases
PAJ_3293	SSF141868	EAL domain-like
PAJ_3293	SSF55073	Nucleotide cyclase
PAJ_3294	SSF118215	Proton glutamate symport protein
PAJ_3295	SSF63411	LuxS/MPP-like metallohydrolase
PAJ_3296	SSF53474	alpha/beta-Hydrolases
PAJ_3297	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
PAJ_3298	SSF53613	Ribokinase-like
PAJ_3299	SSF141868	EAL domain-like
PAJ_3301	SSF54534	FKBP-like
PAJ_3302	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_3303	SSF109604	HD-domain/PDEase-like
PAJ_3303	SSF53067	Actin-like ATPase domain
PAJ_3304	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_3305	SSF52833	Thioredoxin-like
PAJ_3306	SSF50249	Nucleic acid-binding proteins
PAJ_3306	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_3306	SSF68912	Rho N-terminal domain-like
PAJ_3308	SSF160355	Bacterial polysaccharide co-polymerase-like
PAJ_3309	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
PAJ_3310	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
PAJ_3310	SSF51735	NAD(P)-binding Rossmann-fold domains
PAJ_3310	SSF52413	UDP-glucose/GDP-mannose dehydrogenase C-terminal domain
PAJ_3311	SSF51735	NAD(P)-binding Rossmann-fold domains
PAJ_3312	SSF53448	Nucleotide-diphospho-sugar transferases
PAJ_3313	SSF55729	Acyl-CoA N-acyltransferases (Nat)
PAJ_3314	SSF53383	PLP-dependent transferases
PAJ_3319	SSF48452	TPR-like
PAJ_3321	SSF69618	HemD-like
PAJ_3322	SSF53850	Periplasmic binding protein-like II
PAJ_3322	SSF54782	Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain
PAJ_3325	SSF54506	Diaminopimelate epimerase-like
PAJ_3327	SSF47823	lambda integrase-like, N-terminal domain
PAJ_3327	SSF56349	DNA breaking-rejoining enzymes
PAJ_3328	SSF56784	HAD-like
PAJ_3329	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_3330	SSF143865	CorA soluble domain-like
PAJ_3330	SSF144083	Magnesium transport protein CorA, transmembrane region
PAJ_3332	SSF103481	Multidrug resistance efflux transporter EmrE
PAJ_3333	SSF46785	"Winged helix" DNA-binding domain
PAJ_3334	SSF54427	NTF2-like
PAJ_3335	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
PAJ_3336	SSF56931	Outer membrane phospholipase A (OMPLA)
PAJ_3337	SSF47819	HRDC-like
PAJ_3337	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_3340	SSF53474	alpha/beta-Hydrolases
PAJ_3341	SSF56784	HAD-like
PAJ_3342	SSF103473	MFS general substrate transporter
PAJ_3343	SSF103481	Multidrug resistance efflux transporter EmrE
PAJ_3345	SSF46785	"Winged helix" DNA-binding domain
PAJ_3345	SSF53850	Periplasmic binding protein-like II
PAJ_3346	SSF51726	UROD/MetE-like
PAJ_3347	SSF53474	alpha/beta-Hydrolases
PAJ_3348	SSF53167	Purine and uridine phosphorylases
PAJ_3350	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
PAJ_3351	SSF55718	SCP-like
PAJ_3352	SSF56112	Protein kinase-like (PK-like)
PAJ_3356	SSF51556	Metallo-dependent hydrolases
PAJ_3357	SSF82679	N-utilization substance G protein NusG, N-terminal domain
PAJ_3358	SSF143968	UbiD C-terminal domain-like
PAJ_3358	SSF50475	FMN-binding split barrel
PAJ_3359	SSF52343	Ferredoxin reductase-like, C-terminal NADP-linked domain
PAJ_3359	SSF63380	Riboflavin synthase domain-like
PAJ_3360	SSF53901	Thiolase-like
PAJ_3361	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
PAJ_3361	SSF51735	NAD(P)-binding Rossmann-fold domains
PAJ_3361	SSF52096	ClpP/crotonase
PAJ_3362	SSF55920	Creatinase/aminopeptidase
PAJ_3363	SSF54211	Ribosomal protein S5 domain 2-like
PAJ_3363	SSF54980	EF-G C-terminal domain-like
PAJ_3365	SSF52218	Flavoproteins
PAJ_3366	SSF56176	FAD-binding/transporter-associated domain-like
PAJ_3366	SSF56194	Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase, MurB, C-terminal domain
PAJ_3367	SSF46785	"Winged helix" DNA-binding domain
PAJ_3367	SSF50037	C-terminal domain of transcriptional repressors
PAJ_3367	SSF55681	Class II aaRS and biotin synthetases
PAJ_3368	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_3369	SSF50447	Translation proteins
PAJ_3369	SSF50465	EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
PAJ_3369	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_3371	SSF50104	Translation proteins SH3-like domain
PAJ_3371	SSF82679	N-utilization substance G protein NusG, N-terminal domain
PAJ_3372	SSF46906	Ribosomal protein L11, C-terminal domain
PAJ_3372	SSF54747	Ribosomal L11/L12e N-terminal domain
PAJ_3373	SSF56808	Ribosomal protein L1
PAJ_3374	SSF160369	Ribosomal protein L10-like
PAJ_3375	SSF48300	Ribosomal protein L7/12, oligomerisation (N-terminal) domain
PAJ_3375	SSF54736	ClpS-like
PAJ_3376	SSF64484	beta and beta-prime subunits of DNA dependent RNA-polymerase
PAJ_3377	SSF64484	beta and beta-prime subunits of DNA dependent RNA-polymerase
PAJ_3378	SSF46785	"Winged helix" DNA-binding domain
PAJ_3378	SSF53383	PLP-dependent transferases
PAJ_3379	SSF51391	Thiamin phosphate synthase
PAJ_3382	SSF55811	Nudix
PAJ_3383	SSF51726	UROD/MetE-like
PAJ_3385	SSF82282	Homocysteine S-methyltransferase
PAJ_3386	SSF47729	IHF-like DNA-binding proteins
PAJ_3388	SSF51246	Rudiment single hybrid motif
PAJ_3388	SSF52440	PreATP-grasp domain
PAJ_3388	SSF56059	Glutathione synthetase ATP-binding domain-like
PAJ_3389	SSF52335	Methylglyoxal synthase-like
PAJ_3389	SSF53927	Cytidine deaminase-like
PAJ_3390	SSF53807	"Helical backbone" metal receptor
PAJ_3391	SSF53850	Periplasmic binding protein-like II
PAJ_3392	SSF52317	Class I glutamine amidotransferase-like
PAJ_3393	SSF51645	Malate synthase G
PAJ_3394	SSF51621	Phosphoenolpyruvate/pyruvate domain
PAJ_3396	SSF46785	"Winged helix" DNA-binding domain
PAJ_3396	SSF48008	GntR ligand-binding domain-like
PAJ_3398	SSF103473	MFS general substrate transporter
PAJ_3399	SSF56601	beta-lactamase/transpeptidase-like
PAJ_3400	SSF46785	"Winged helix" DNA-binding domain
PAJ_3400	SSF55781	GAF domain-like
PAJ_3401	SSF47644	Methionine synthase domain
PAJ_3401	SSF51717	Dihydropteroate synthetase-like
PAJ_3401	SSF52242	Cobalamin (vitamin B12)-binding domain
PAJ_3401	SSF56507	Methionine synthase activation domain-like
PAJ_3401	SSF82282	Homocysteine S-methyltransferase
PAJ_3404	SSF159270	YmcC-like
PAJ_3406	SSF53697	SIS domain
PAJ_3407	SSF53633	Carbamate kinase-like
PAJ_3407	SSF55021	ACT-like
PAJ_3409	SSF109755	PhoU-like
PAJ_3410	SSF53649	Alkaline phosphatase-like
PAJ_3412	SSF64288	Chorismate lyase-like
PAJ_3414	SSF69593	Glycerol-3-phosphate (1)-acyltransferase
PAJ_3416	SSF46785	"Winged helix" DNA-binding domain
PAJ_3416	SSF51306	LexA/Signal peptidase
PAJ_3418	SSF69047	Hypothetical protein YjbJ
PAJ_3419	SSF46785	"Winged helix" DNA-binding domain
PAJ_3420	SSF56925	OMPA-like
PAJ_3421	SSF51395	FMN-linked oxidoreductases
PAJ_3423	SSF50129	GroES-like
PAJ_3423	SSF51735	NAD(P)-binding Rossmann-fold domains
PAJ_3424	SSF48024	N-terminal domain of DnaB helicase
PAJ_3424	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_3425	SSF46785	"Winged helix" DNA-binding domain
PAJ_3425	SSF54909	Dimeric alpha+beta barrel
PAJ_3427	SSF53383	PLP-dependent transferases
PAJ_3428	SSF111038	YjbQ-like
PAJ_3429	SSF142906	YjbR-like
PAJ_3430	SSF50129	GroES-like
PAJ_3430	SSF51735	NAD(P)-binding Rossmann-fold domains
PAJ_3431	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_3432	SSF50249	Nucleic acid-binding proteins
PAJ_3433	SSF49899	Concanavalin A-like lectins/glucanases
PAJ_3434	SSF52499	Isochorismatase-like hydrolases
PAJ_3435	SSF46689	Homeodomain-like
PAJ_3435	SSF51215	Regulatory protein AraC
PAJ_3440	SSF46689	Homeodomain-like
PAJ_3441	SSF46955	Putative DNA-binding domain
PAJ_3442	SSF47616	GST C-terminal domain-like
PAJ_3442	SSF52833	Thioredoxin-like
PAJ_3445	SSF46785	"Winged helix" DNA-binding domain
PAJ_3445	SSF53850	Periplasmic binding protein-like II
PAJ_3449	SSF56925	OMPA-like
PAJ_3452	SSF56801	Acetyl-CoA synthetase-like
PAJ_3453	SSF118215	Proton glutamate symport protein
PAJ_3454	SSF53697	SIS domain
PAJ_3455	SSF55604	Glucose permease domain IIB
PAJ_3456	SSF55785	PYP-like sensor domain (PAS domain)
PAJ_3456	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
PAJ_3457	SSF46689	Homeodomain-like
PAJ_3457	SSF51182	RmlC-like cupins
PAJ_3458	SSF103473	MFS general substrate transporter
PAJ_3459	SSF159871	YdgH-like
PAJ_3460	SSF90123	ABC transporter transmembrane region
PAJ_3462	SSF51905	FAD/NAD(P)-binding domain
PAJ_3462	SSF54373	FAD-linked reductases, C-terminal domain
PAJ_3463	SSF46626	Cytochrome c
PAJ_3464	SSF103473	MFS general substrate transporter
PAJ_3465	SSF47170	Aspartate receptor, ligand-binding domain
PAJ_3465	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
PAJ_3466	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
PAJ_3467	SSF111364	Tsx-like channel
PAJ_3468	SSF47384	Homodimeric domain of signal transducing histidine kinase
PAJ_3468	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
PAJ_3469	SSF46894	C-terminal effector domain of the bipartite response regulators
PAJ_3469	SSF52172	CheY-like
PAJ_3470	SSF46689	Homeodomain-like
PAJ_3471	SSF46785	"Winged helix" DNA-binding domain
PAJ_3471	SSF53850	Periplasmic binding protein-like II
PAJ_3472	SSF103473	MFS general substrate transporter
PAJ_3473	SSF50998	Quinoprotein alcohol dehydrogenase-like
PAJ_3475	SSF51735	NAD(P)-binding Rossmann-fold domains
PAJ_3475	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
PAJ_3476	SSF53067	Actin-like ATPase domain
PAJ_3477	SSF46785	"Winged helix" DNA-binding domain
PAJ_3477	SSF53067	Actin-like ATPase domain
PAJ_3478	SSF50331	MOP-like
PAJ_3478	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_3479	SSF55729	Acyl-CoA N-acyltransferases (Nat)
PAJ_3480	SSF53850	Periplasmic binding protein-like II
PAJ_3481	SSF160964	MalF N-terminal region-like
PAJ_3481	SSF161098	MetI-like
PAJ_3482	SSF161098	MetI-like
PAJ_3483	SSF51126	Pectin lyase-like
PAJ_3484	SSF53659	Isocitrate/Isopropylmalate dehydrogenase-like
PAJ_3486	SSF46785	"Winged helix" DNA-binding domain
PAJ_3486	SSF53850	Periplasmic binding protein-like II
PAJ_3487	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
PAJ_3488	SSF47616	GST C-terminal domain-like
PAJ_3488	SSF52833	Thioredoxin-like
PAJ_3489	SSF53613	Ribokinase-like
PAJ_3490	SSF49303	beta-Galactosidase/glucuronidase domain
PAJ_3490	SSF49785	Galactose-binding domain-like
PAJ_3490	SSF51445	(Trans)glycosidases
PAJ_3490	SSF74650	Galactose mutarotase-like
PAJ_3491	SSF103473	MFS general substrate transporter
PAJ_3492	SSF56935	Porins
PAJ_3492	SSF57997	Tropomyosin
PAJ_3493	SSF55604	Glucose permease domain IIB
PAJ_3494	SSF49899	Concanavalin A-like lectins/glucanases
PAJ_3494	SSF75005	Arabinanase/levansucrase/invertase
PAJ_3495	SSF53822	Periplasmic binding protein-like I
PAJ_3496	SSF52833	Thioredoxin-like
PAJ_3496	SSF54423	DsbC/DsbG N-terminal domain-like
PAJ_3497	SSF52799	(Phosphotyrosine protein) phosphatases II
PAJ_3497	SSF56281	Metallo-hydrolase/oxidoreductase
PAJ_3499	SSF51905	FAD/NAD(P)-binding domain
PAJ_3500	SSF50814	Lipocalins
PAJ_3501	SSF46785	"Winged helix" DNA-binding domain
PAJ_3501	SSF53850	Periplasmic binding protein-like II
PAJ_3502	SSF63380	Riboflavin synthase domain-like
PAJ_3503	SSF103473	MFS general substrate transporter
PAJ_3505	SSF55729	Acyl-CoA N-acyltransferases (Nat)
PAJ_3508	SSF51905	FAD/NAD(P)-binding domain
PAJ_3509	SSF56935	Porins
PAJ_3510	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
PAJ_3513	SSF53639	AraD/HMP-PK domain-like
PAJ_3514	SSF51658	Xylose isomerase-like
PAJ_3515	SSF51366	Ribulose-phoshate binding barrel
PAJ_3517	SSF53067	Actin-like ATPase domain
PAJ_3518	SSF103473	MFS general substrate transporter
PAJ_3519	SSF51197	Clavaminate synthase-like
PAJ_3520	SSF89733	L-sulfolactate dehydrogenase-like
PAJ_3521	SSF63829	Calcium-dependent phosphotriesterase
PAJ_3522	SSF53822	Periplasmic binding protein-like I
PAJ_3524	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_3525	SSF46785	"Winged helix" DNA-binding domain
PAJ_3525	SSF55781	GAF domain-like
PAJ_3526	SSF55729	Acyl-CoA N-acyltransferases (Nat)
PAJ_3527	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_3529	SSF51430	NAD(P)-linked oxidoreductase
PAJ_3530	SSF51445	(Trans)glycosidases
PAJ_3531	SSF46689	Homeodomain-like
PAJ_3531	SSF52317	Class I glutamine amidotransferase-like
PAJ_3532	SSF53474	alpha/beta-Hydrolases
PAJ_3533	SSF52218	Flavoproteins
PAJ_3534	SSF47170	Aspartate receptor, ligand-binding domain
PAJ_3534	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
PAJ_3535	SSF50249	Nucleic acid-binding proteins
PAJ_3536	SSF50037	C-terminal domain of transcriptional repressors
PAJ_3537	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_3538	SSF53448	Nucleotide-diphospho-sugar transferases
PAJ_3540	SSF53448	Nucleotide-diphospho-sugar transferases
PAJ_3543	SSF52833	Thioredoxin-like
PAJ_3543	SSF74863	Thiol:disulfide interchange protein DsbD, N-terminal domain (DsbD-alpha)
PAJ_3544	SSF54913	GlnB-like
PAJ_3546	SSF48557	L-aspartase-like
PAJ_3548	SSF50129	GroES-like
PAJ_3549	SSF48592	GroEL equatorial domain-like
PAJ_3549	SSF52029	GroEL apical domain-like
PAJ_3549	SSF54849	GroEL-intermediate domain like
PAJ_3551	SSF102114	Radical SAM enzymes
PAJ_3552	SSF50104	Translation proteins SH3-like domain
PAJ_3552	SSF50249	Nucleic acid-binding proteins
PAJ_3555	SSF50814	Lipocalins
PAJ_3556	SSF55681	Class II aaRS and biotin synthetases
PAJ_3557	SSF50156	PDZ domain-like
PAJ_3557	SSF50494	Trypsin-like serine proteases
PAJ_3558	SSF50156	PDZ domain-like
PAJ_3558	SSF50494	Trypsin-like serine proteases
PAJ_3560	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_3561	SSF52161	Ribosomal protein L13
PAJ_3562	SSF54211	Ribosomal protein S5 domain 2-like
PAJ_3563	SSF47616	GST C-terminal domain-like
PAJ_3563	SSF52833	Thioredoxin-like
PAJ_3564	SSF101738	SspB-like
PAJ_3565	SSF52218	Flavoproteins
PAJ_3565	SSF52343	Ferredoxin reductase-like, C-terminal NADP-linked domain
PAJ_3565	SSF63380	Riboflavin synthase domain-like
PAJ_3566	SSF51395	FMN-linked oxidoreductases
PAJ_3566	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
PAJ_3566	SSF69336	Alpha subunit of glutamate synthase, C-terminal domain
PAJ_3567	SSF47226	Histidine-containing phosphotransfer domain, HPT domain
PAJ_3567	SSF47384	Homodimeric domain of signal transducing histidine kinase
PAJ_3567	SSF52172	CheY-like
PAJ_3567	SSF55785	PYP-like sensor domain (PAS domain)
PAJ_3567	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
PAJ_3568	SSF53955	Lysozyme-like
PAJ_3569	SSF55594	HPr-like
PAJ_3570	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_3571	SSF55804	Phoshotransferase/anion transport protein
PAJ_3572	SSF69754	Ribosome binding protein Y (YfiA homologue)
PAJ_3574	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_3577	SSF56784	HAD-like
PAJ_3578	SSF53697	SIS domain
PAJ_3580	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_3584	SSF52091	SpoIIaa-like
PAJ_3585	SSF82657	BolA-like
PAJ_3586	SSF55205	EPT/RTPC-like
PAJ_3587	SSF47413	lambda repressor-like DNA-binding domains
PAJ_3588	SSF48576	Terpenoid synthases
PAJ_3589	SSF141091	L21p-like
PAJ_3591	SSF110324	Ribosomal L27 protein-like
PAJ_3592	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_3592	SSF82051	Obg GTP-binding protein N-terminal domain
PAJ_3593	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
PAJ_3594	SSF56601	beta-lactamase/transpeptidase-like
PAJ_3595	SSF46557	GreA transcript cleavage protein, N-terminal domain
PAJ_3595	SSF54534	FKBP-like
PAJ_3596	SSF75471	YhbY-like
PAJ_3597	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
PAJ_3598	SSF140990	FtsH protease domain-like
PAJ_3598	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_3599	SSF51717	Dihydropteroate synthetase-like
PAJ_3600	SSF53738	Phosphoglucomutase, first 3 domains
PAJ_3600	SSF55957	Phosphoglucomutase, C-terminal domain
PAJ_3602	SSF74942	YhbC-like, C-terminal domain
PAJ_3602	SSF75420	YhbC-like, N-terminal domain
PAJ_3603	SSF47794	Rad51 N-terminal domain-like
PAJ_3603	SSF50249	Nucleic acid-binding proteins
PAJ_3603	SSF54814	Prokaryotic type KH domain (KH-domain type II)
PAJ_3603	SSF69705	Transcription factor NusA, N-terminal domain
PAJ_3604	SSF46955	Putative DNA-binding domain
PAJ_3604	SSF50447	Translation proteins
PAJ_3604	SSF52156	Initiation factor IF2/eIF5b, domain 3
PAJ_3604	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_3605	SSF89919	Ribosome-binding factor A, RbfA
PAJ_3606	SSF55120	Pseudouridine synthase
PAJ_3606	SSF88697	PUA domain-like
PAJ_3607	SSF47060	S15/NS1 RNA-binding domain
PAJ_3608	SSF46915	Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3
PAJ_3608	SSF50249	Nucleic acid-binding proteins
PAJ_3608	SSF54211	Ribosomal protein S5 domain 2-like
PAJ_3608	SSF54791	Eukaryotic type KH-domain (KH-domain type I)
PAJ_3608	SSF55666	Ribonuclease PH domain 2-like
PAJ_3610	SSF48452	TPR-like
PAJ_3611	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_3612	SSF51679	Bacterial luciferase-like
PAJ_3615	SSF55718	SCP-like
PAJ_3616	SSF55729	Acyl-CoA N-acyltransferases (Nat)
PAJ_3617	SSF82771	GIY-YIG endonuclease
PAJ_3618	SSF50475	FMN-binding split barrel
PAJ_3619	SSF52317	Class I glutamine amidotransferase-like
PAJ_3620	SSF51735	NAD(P)-binding Rossmann-fold domains
PAJ_3621	SSF102114	Radical SAM enzymes
PAJ_3622	SSF51998	PFL-like glycyl radical enzymes
PAJ_3623	SSF51445	(Trans)glycosidases
PAJ_3623	SSF55545	beta-N-acetylhexosaminidase-like domain
PAJ_3624	SSF47413	lambda repressor-like DNA-binding domains
PAJ_3624	SSF53822	Periplasmic binding protein-like I
PAJ_3625	SSF50692	ADC-like
PAJ_3625	SSF53706	Formate dehydrogenase/DMSO reductase, domains 1-3
PAJ_3626	SSF56519	Penicillin binding protein dimerisation domain
PAJ_3626	SSF56601	beta-lactamase/transpeptidase-like
PAJ_3627	SSF111369	HlyD-like secretion proteins
PAJ_3628	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
PAJ_3628	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
PAJ_3628	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
PAJ_3629	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
PAJ_3629	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
PAJ_3629	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
PAJ_3630	SSF56954	Outer membrane efflux proteins (OEP)
PAJ_3631	SSF56801	Acetyl-CoA synthetase-like
PAJ_3631	SSF69593	Glycerol-3-phosphate (1)-acyltransferase
PAJ_3632	SSF103473	MFS general substrate transporter
PAJ_3633	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
PAJ_3634	SSF55298	YjgF-like
PAJ_3635	SSF54893	Aspartate carbamoyltransferase, Regulatory-chain, N-terminal domain
PAJ_3635	SSF57825	Aspartate carbamoyltransferase, Regulatory-chain, C-terminal domain
PAJ_3636	SSF53671	Aspartate/ornithine carbamoyltransferase
PAJ_3637	SSF53671	Aspartate/ornithine carbamoyltransferase
PAJ_3638	SSF89946	Hypothetical protein VC0424
PAJ_3639	SSF47240	Ferritin-like
PAJ_3640	SSF55729	Acyl-CoA N-acyltransferases (Nat)
PAJ_3642	SSF46589	tRNA-binding arm
PAJ_3642	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
PAJ_3642	SSF50677	ValRS/IleRS/LeuRS editing domain
PAJ_3642	SSF52374	Nucleotidylyl transferase
PAJ_3643	SSF102400	DNA polymerase III chi subunit
PAJ_3644	SSF52949	Macro domain-like
PAJ_3644	SSF53187	Zn-dependent exopeptidases
PAJ_3647	SSF53187	Zn-dependent exopeptidases
PAJ_3647	SSF55031	Bacterial exopeptidase dimerisation domain
PAJ_3648	SSF52317	Class I glutamine amidotransferase-like
PAJ_3649	SSF51556	Metallo-dependent hydrolases
PAJ_3651	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_3652	SSF47413	lambda repressor-like DNA-binding domains
PAJ_3652	SSF53822	Periplasmic binding protein-like I
PAJ_3653	SSF53822	Periplasmic binding protein-like I
PAJ_3654	SSF53613	Ribokinase-like
PAJ_3655	SSF51366	Ribulose-phoshate binding barrel
PAJ_3659	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_3660	SSF53850	Periplasmic binding protein-like II
PAJ_3667	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_3668	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_3670	SSF103088	OmpA-like
PAJ_3671	SSF58113	Apolipoprotein A-I
PAJ_3672	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
PAJ_3673	SSF116734	DNA methylase specificity domain
PAJ_3674	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_3677	SSF56112	Protein kinase-like (PK-like)
PAJ_3681	SSF53383	PLP-dependent transferases
PAJ_3682	SSF56801	Acetyl-CoA synthetase-like
PAJ_3683	SSF103481	Multidrug resistance efflux transporter EmrE
PAJ_3684	SSF46785	"Winged helix" DNA-binding domain
PAJ_3684	SSF53850	Periplasmic binding protein-like II
PAJ_3686	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
PAJ_3688	SSF103473	MFS general substrate transporter
PAJ_3690	SSF46785	"Winged helix" DNA-binding domain
PAJ_3690	SSF53613	Ribokinase-like
PAJ_3691	SSF51569	Aldolase
PAJ_3692	SSF51197	Clavaminate synthase-like
PAJ_3693	SSF103473	MFS general substrate transporter
PAJ_3695	SSF69593	Glycerol-3-phosphate (1)-acyltransferase
PAJ_3696	SSF47336	ACP-like
PAJ_3698	SSF56801	Acetyl-CoA synthetase-like
PAJ_3699	SSF53448	Nucleotide-diphospho-sugar transferases
PAJ_3700	SSF89392	Prokaryotic lipoproteins and lipoprotein localization factors
PAJ_3701	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
PAJ_3703	SSF53901	Thiolase-like
PAJ_3704	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
PAJ_3705	SSF51735	NAD(P)-binding Rossmann-fold domains
PAJ_3706	SSF53901	Thiolase-like
PAJ_3707	SSF56214	4'-phosphopantetheinyl transferase
PAJ_3708	SSF53474	alpha/beta-Hydrolases
PAJ_3708	SSF81296	E set domains
PAJ_3709	SSF55729	Acyl-CoA N-acyltransferases (Nat)
PAJ_3710	SSF141868	EAL domain-like
PAJ_3711	SSF51735	NAD(P)-binding Rossmann-fold domains
PAJ_3711	SSF52283	Formate/glycerate dehydrogenase catalytic domain-like
PAJ_3712	SSF51569	Aldolase
PAJ_3713	SSF50129	GroES-like
PAJ_3713	SSF51735	NAD(P)-binding Rossmann-fold domains
PAJ_3714	SSF53067	Actin-like ATPase domain
PAJ_3715	SSF103473	MFS general substrate transporter
PAJ_3716	SSF46689	Homeodomain-like
PAJ_3717	SSF56112	Protein kinase-like (PK-like)
PAJ_3719	SSF53383	PLP-dependent transferases
PAJ_3721	SSF48208	Six-hairpin glycosidases
PAJ_3722	SSF51735	NAD(P)-binding Rossmann-fold domains
PAJ_3723	SSF51182	RmlC-like cupins
PAJ_3726	SSF161098	MetI-like
PAJ_3727	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_3728	SSF69349	Phage fibre proteins
PAJ_3729	SSF51604	Enolase C-terminal domain-like
PAJ_3730	SSF51735	NAD(P)-binding Rossmann-fold domains
PAJ_3731	SSF50129	GroES-like
PAJ_3731	SSF51735	NAD(P)-binding Rossmann-fold domains
PAJ_3732	SSF103473	MFS general substrate transporter
PAJ_3733	SSF48008	GntR ligand-binding domain-like
PAJ_3734	SSF101327	YgfB-like
PAJ_3734	SSF103642	Sec-C motif
PAJ_3735	SSF56601	beta-lactamase/transpeptidase-like
PAJ_3737	SSF55729	Acyl-CoA N-acyltransferases (Nat)
PAJ_3738	SSF53649	Alkaline phosphatase-like
PAJ_3739	SSF53448	Nucleotide-diphospho-sugar transferases
PAJ_3740	SSF51004	C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
PAJ_3741	SSF53254	Phosphoglycerate mutase-like
PAJ_3742	SSF103473	MFS general substrate transporter
PAJ_3743	SSF47413	lambda repressor-like DNA-binding domains
PAJ_3743	SSF53822	Periplasmic binding protein-like I
PAJ_3744	SSF53590	Nucleoside hydrolase
PAJ_3745	SSF103473	MFS general substrate transporter
PAJ_3746	SSF55826	YbaK/ProRS associated domain
PAJ_3747	SSF55073	Nucleotide cyclase
PAJ_3749	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
PAJ_3750	SSF102220	DNA polymerase III psi subunit
PAJ_3751	SSF55729	Acyl-CoA N-acyltransferases (Nat)
PAJ_3752	SSF56784	HAD-like
PAJ_3754	SSF56784	HAD-like
PAJ_3755	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_3755	SSF54211	Ribosomal protein S5 domain 2-like
PAJ_3756	SSF47413	lambda repressor-like DNA-binding domains
PAJ_3756	SSF52374	Nucleotidylyl transferase
PAJ_3756	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_3757	SSF46894	C-terminal effector domain of the bipartite response regulators
PAJ_3758	SSF49401	Bacterial adhesins
PAJ_3759	SSF49354	PapD-like
PAJ_3759	SSF49584	Periplasmic chaperone C-domain
PAJ_3760	SSF141729	FimD N-terminal domain-like
PAJ_3761	SSF49401	Bacterial adhesins
PAJ_3762	SSF49354	PapD-like
PAJ_3762	SSF49584	Periplasmic chaperone C-domain
PAJ_3763	SSF50129	GroES-like
PAJ_3763	SSF51735	NAD(P)-binding Rossmann-fold domains
PAJ_3764	SSF46785	"Winged helix" DNA-binding domain
PAJ_3764	SSF53850	Periplasmic binding protein-like II
PAJ_3765	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_3766	SSF100950	NagB/RpiA/CoA transferase-like
PAJ_3767	SSF53613	Ribokinase-like
PAJ_3768	SSF103473	MFS general substrate transporter
PAJ_3769	SSF74650	Galactose mutarotase-like
PAJ_3770	SSF53383	PLP-dependent transferases
PAJ_3771	SSF51905	FAD/NAD(P)-binding domain
PAJ_3772	SSF55729	Acyl-CoA N-acyltransferases (Nat)
PAJ_3773	SSF103473	MFS general substrate transporter
PAJ_3774	SSF56935	Porins
PAJ_3775	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_3776	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_3778	SSF48371	ARM repeat
PAJ_3779	SSF53822	Periplasmic binding protein-like I
PAJ_3780	SSF46785	"Winged helix" DNA-binding domain
PAJ_3780	SSF48008	GntR ligand-binding domain-like
PAJ_3781	SSF160467	PH0987 N-terminal domain-like
PAJ_3781	SSF50891	Cyclophilin-like
PAJ_3781	SSF51230	Single hybrid motif
PAJ_3781	SSF51246	Rudiment single hybrid motif
PAJ_3781	SSF52440	PreATP-grasp domain
PAJ_3781	SSF56059	Glutathione synthetase ATP-binding domain-like
PAJ_3782	SSF48435	Bacterial muramidases
PAJ_3782	SSF53955	Lysozyme-like
PAJ_3783	SSF48295	TrpR-like
PAJ_3784	SSF52972	ITPase-like
PAJ_3785	SSF53254	Phosphoglycerate mutase-like
PAJ_3786	SSF46689	Homeodomain-like
PAJ_3786	SSF55136	Probable bacterial effector-binding domain
PAJ_3788	SSF46894	C-terminal effector domain of the bipartite response regulators
PAJ_3788	SSF52172	CheY-like
PAJ_3789	SSF75217	alpha/beta knot