        thrA NONE
        thrB NONE
        thrC    5038 ..    5065 + -10.7  -4.08945   ATGCTCTGTCAGTCA        G-GATGAGGTGG GCTGA CCACCTCATCGC        TTTTGCAGGGCTAAT  87 40
        talB    7037 ..    7059 +   -17  -4.35524   GCTGTAATCGTTTTA           CCGTGGCGGC GCT GTCGCCACGG           TTTTCCCTTTCCGCC 100 34
         mog NONE
        proP    9220 ..    9230 +  -5.4  -3.60971   GCAGAACGATCCGTC                 CGAA GGT TTCG                 TTTAGCACTTCACCT  56 100
        dnaK   12006 ..   12042 +   -13  -2.74192   GACAGCCGTTGAAAC   CAGCACGGGCGTAGGAG TTTT CTCC-ACGCCCGTGCGA    TCATGTTAAGGGCTA  81 71
        dnaJ   13238 ..   13257 + -13.6  -5.82316   TCAGACCCGATGAAA            GCGGAGAG GAAA CTCTCCGC             TTTTTTTTGCGTCCT 100 55
        nhaA   14655 ..   14691 + -15.4  -2.79117   GCTGCGATAAAAATC    CATTGCTGCAACAC ATTCATCCA GTGTTGCAGCAATG    CTGTTTCCTTTCTCA  95 31
        ribF   16537 ..   16550 +  -6.7  -3.01712   GGATCTCTATGGTCG               CCACA TTGA TGTGG                TGTTGAAGCAGAAAA  55 65
        ileS NONE
        lspA NONE
        fkpB NONE
        ispH   21439 ..   21456 +  -8.4   -5.0925   GTTAAGCAATGAAAA             GGCCGA CTCTGT TCGGCC              TTTTTGCTTTTCAGA  93 50
        dapB   22602 ..   22643 + -16.1  -4.08767   CTTTCGCTTCTCAGT AAACCTGCTAATTTTGACC ATTT GGTCAAAATTAGCAGGTGG  TTTTCCCGGAATAAA 100 187
        carA NONE
        carB   27325 ..   27379 + -14.9  -5.75945   TGAGTGGCGGTAATA GCCCCTGCGGTGGGACGATTTGCCAG TGTG CTGGCTTAACGCTCC-TCGCAGGGGC TTTTTTTTGAGAGAT 100 48
    PAJ_0022   28938 ..   28956 +  -6.7  -4.62336   TTAGCGTGATTCGAC            CAGGTGCC TGAT GGC-CCTG             TTTTTCCGCTCCCGT  77 91
        yhjC   31211 ..   31224 +  -3.9  -4.32046   TAAGCGGCAGCAATC               TCAAA TAAA TTTGA                TTTAATTTTTAGCCA  65 141
    PAJ_0025   32508 ..   32525 + -12.7  -5.22006   TCTGATGACACACAA             CGGCTCC CCAG GGAGCCG              TTTTTATTATCATGA 100 36
        folA   33231 ..   33250 + -12.2  -5.64274   ACGCGTAGTAAAGAA            CGCCTTGT TGTG ACAAGGCG             TTTTTTTATGGCTGC 100 44
        djlA   41343 ..   41359 +  -9.3  -3.27653   CCCGGTAATCGGTTT              GAGCGCG ACG CGCGCGC              TGTTATCGTCACCGT  65 281
        yabI   48197 ..   48223 + -13.7  -3.10344   TATCGGTTAACGGCG         CGGGATGCCGA GCACA TCGGCTTCCCG         TATGTTCCCTGACAA  88 31
        setA   54728 ..   54766 + -21.2  -3.53444   AAAGACGTTTAATAA  GCAC-GTTCCCCCGGCA GAACAG TGCCGGGGGAACGGTGC   TTTAGAGCACAATCC 100 29
        yybE   57665 ..   57683 +  -7.4  -3.56366   TTGAGCGCGAAGTAT             TGGTCATC ACT GATGTCCA             TTTCGCCACCTTCTT  63 454
        ilvI NONE
        ilvH   70337 ..   70353 + -11.5  -5.95286   CAGCGAAATTTGCAA              CCCGGCG AAA TGCCGGG              TTTTTTCTTTTTAAT 100 58
        fruR   71514 ..   71540 +  -4.5  -3.70511   AATTTCTAAATAAAA        TCAGG-GCAG CAATGCGT CTGCCCCTGA         TTATTACCTGCTGTT  57 28
        mraZ NONE
        mraW NONE
        ftsL NONE
        ftsI   75523 ..   75556 +  -8.8  -3.06915   CCTGCGCGACTTACT     CGGAC-CGTGGGTGC CTGAC GCACCTGCGCGCCCG     TTGCGTGACATGACT  63 41
        murE   76962 ..   76978 +  -5.1  -2.77547   CCACGGTCGCCACAC              TGCTAGG AGG CGTAGCA              TGATTCCGGTTTCAT  49 6
        murF NONE
        mraY NONE
        murD NONE
        ftsW NONE
        murG   83002 ..   83029 + -10.6  -2.73875   GCGCCGCACATTAAC        GCATCAGGTCAGC CTG GCTGACCCG-TGC        TCATATTGAGCACAA  69 27
        murC NONE
        ddlB NONE
        ftsQ NONE
        ftsA NONE
        ftsZ   88810 ..   88822 +  -2.7   -3.0263   TTGGGATTTCCCGCT                CTTTG TGC TAAAG                TGTTCGCCCGCTGGT  43 55
        lpxC   89821 ..   89864 +  -7.6   -5.4833   CTCAGAACGTAAAAA CGGCTGGTTGC-GCTGAC ACTCTCTCCG GTCAGTTGCA-CCAGCCG TTTTTTATTGCCTCG  95 47
        secM   90632 ..   90646 +    -7  -2.53581   TTTTAGATTTCGCAG               TCCGGG TGA CCCGGC               TGAATTGAGAATATA  56 61
        secA   93391 ..   93405 + -11.4  -6.31682   AGCGGTTAACGAAAA               GGAGCC ACT GGCTCC               TTTTTTTTTACTTTT 100 43
        mutT   94321 ..   94334 +  -2.3  -3.86897   ATTATCCTGGTAAAA               CCCGT TCAA ACTGG                TTTGTAAACGGTAGG  54 440
        guaC   96786 ..   96826 + -12.8  -3.28712   TTAAGGTTGCCTGCT GCGTATGCAGTAAGGGC TATACAGC GCCTTTACTGCAT-CGC  TTCTCCCAGCCCAAA  87 37
        ampD NONE
        ampE  103002 ..  103015 +  -9.5  -2.70946   TAGAGGTTGGAATTG               CCCGG AATG CCGGG                ATCTTTCTGCGCCCA  62 500
        pdhR NONE
        aceE NONE
        aceF  112376 ..  112393 + -14.1  -4.87786   GTAAAAAGCGCAAAA             GGCCGGC AAAT GCCGGCC              TTTTTGTAACATTCA 100 37
        lpdA  114091 ..  114108 + -14.1  -5.66684   TCAGAACTGAAATAG             CGGCCCC TTAT GGGGCCG              TTTTTTTATGGCTTA 100 44
        yajO  116738 ..  116756 +  -9.5  -5.58209   TGACTGTGTTAGCAG             GCGGGGC TTTAC GCCCTGC             TTTTTTTCCGTTTAC 100 54
        acnB  119576 ..  119597 + -12.3  -5.64274   CGTTGGTCCATTTAA           GAGGGACGC TCTG GCGTTCCTC            TTTTTTTATGCCTGA 100 49
        yacL  120187 ..  120198 +    -3  -3.54029   CTTAATGATTTAATA                TCAT CATG ATGA                 TTATAATTAATCACA  49 139
       kdgT1 NONE
        ygbK  122749 ..  122768 +  -2.2  -4.45696   TCATTCTCATCTCTT            TTAAAAGC CTTT GATTTTAA             TCTTTTTTATTTCGG  61 325
         tcp  124827 ..  124877 + -12.6   -2.8082   CCGCTCAAGTGCACG GGCGTTTTCAAACTGATCGAACGC GCG GGGATAGATCAGTTGGGGAACGCC ATTCTTGAGTAACTG  74 246
        cueO  131544 ..  131554 +  -4.6  -3.92075   CTCGCGATACGTTTT                 GCCT GCG GGGC                 TTTCTGCATCCAGAT  59 320
         hpt  133582 ..  133594 +  -6.3  -3.56862   AGATTATAAACCTGC                TCAAC AAC GTTGA                TTTCGCAAAGTTTAT  58 303
        yadG NONE
        yadH  135860 ..  135875 + -10.4  -5.71712   TGACGGACAAAAAAA              GCAGCG ATAT CGCTGC               TTTTTTTATGTGGGC 100 46
        hrpB  145477 ..  145495 +  -2.3  -2.59564   CGTCACAGGGCGGAA             CCTCAGG TTAAT TCAGAGG             GTTCTGCCATGCGAC  39 15
        mrcB  148123 ..  148136 +  -8.1  -5.64274   AAGCGGTTAAAAAAA               GGCAC TCCG GTGCC                TTTTTTTGTGCCTGC 100 49
        fhuA  150513 ..  150528 + -11.8  -2.73159   GGTTCTGATAGATGA              GGGCGC TCCG GCGCCC               GTTTACAGGGATTAC  75 33
        fhuC NONE
        fhuD  152227 ..  152239 +  -4.1  -4.29302   GCGCTGGAGAAGGTC                TGATG CGG CATCG                TTATTTTCCTGTCAC  62 23
        fhuB  154215 ..  154232 + -12.7  -2.92111   GCTCGTTAAAAAAAA             GACCGGC GTTT GCCGGTC              TGCATTTTTTACAGC  81 32
        yadR  156314 ..  156341 +  -8.6  -3.79043   CGCGATCAGAAGCCC        TATGGCCAGAAGC GGT GCTT-TGGTCATA        TTTAAATTCCTGGTG  71 281
        degP  161159 ..  161176 + -12.7  -5.24129   GCTTGATGCTTATCA             GGCGGAC TTCG GTCCGCC              TTTTTTATGGCACAG 100 46
        cdaR NONE
    PAJ_0133  163740 ..  163780 + -16.2  -2.65815   ATTGCCAATAAAAAA  GGCCAGACGCGTCAAGTG AATCA CACTTAATGCGGCTGGCC  TGATGTAAATCTGAA 100 49
        rpsB  169916 ..  169933 + -12.7  -4.77173   AGATGTGATCTGTAA             GGGGCCA AACA TGGCCCC              TTTATTTTATCCAAG 100 76
         tsf  170911 ..  170930 + -13.6  -5.36441   CTTAATGATCTGAAA            GAACCGCC AGAT GGCGGTTC             TTTTTTGTCTGCCAC 100 36
        pyrH NONE
         frr  172503 ..  172547 + -11.6   -4.3208   CATCGCCGACCAAAA CGCCGTACAGA-GAGGCATTCT GAC AGAATGTCACCTCTG-GCGGCG TTTTACATTGTGCCC  93 47
         dxr  173880 ..  173900 +  -4.6  -3.85698   ACCAAATTCGGTGTG            GCCTGGCA GACAG TGCCGGGA            TTTGTACCGGGCGCA  59 117
        uppS NONE
        cdsA  175577 ..  175589 +  -4.1  -3.53012   TGTTTATTGCTGTTG                GTGTT TCA GACAC                TTTAAGGGCAAACGA  52 8
        ecfE  176959 ..  176972 +  -2.3  -3.07622   CTCACGTTTGTAACC               GCTGG AACG CGAGC                TTACGTGGGATGTGT  42 28
        yaeT NONE
        ompH NONE
        lpxD  181121 ..  181156 +   -17  -3.47383   CACGGAACCTATTTG    CGGCCTGCCAACGATCA TGA TGATCGGT-GCAGGCCG    TGTTATTGATGTCAT 100 101
        fabZ NONE
        lpxA NONE
        lpxB NONE
        rnhB NONE
        dnaE NONE
        accA  188717 ..  188732 + -10.4  -5.63504   CTTCATGACGATAAA              GCGGAC TTCG GTCCGC               TTTTTTTATGCCATT 100 46
        ldcC NONE
        yaeR NONE
        tilS  193062 ..  193080 +  -5.9  -2.60512   AGGTGGGCGGGAGTG             CATCCCG CCCGA CGGGAAG             TGAATTACTCTTCGC  51 348
        yaeJ  194251 ..  194267 + -13.7  -3.42574   TTCAGCAAAAAAAAA              CGCCCCT TAA AGGGGCG              TTATAGTGCGGTTAC  91 116
        gmhB  200807 ..  200819 +  -6.2   -3.0497   GCCACCTCGCGACAG                GCGG TTAAC CCGC                TGTTCGCACTGCTCT  53 249
        yafD  208693 ..  208710 + -11.3  -4.13014   TCGAATAAGAAAAAA             GGCTGAC ATTT GTCAGCC              TTTTCAACGTATCAG  87 114
        yafS  211866 ..  211882 +  -5.1  -4.07687   ATCGACGTTCTTAAC              CGGCT TCTTCTC AGCCG              TTTTCCAGCCACGCT  64 187
        dnaQ  213161 ..  213185 + -16.5   -5.1417   TCCGCCAAATTTCGA          CGCCATGCTGG TTA TCAGCATGGCG          TTTTTGCTTTTCTAG 100 245
        yncC NONE
        hyuE NONE
    PAJ_0181  218302 ..  218333 + -15.9  -3.12353   GCTTCCGGGCGGCAA      GCGCGTGGCGGCA AAAGGC TGTCGCCACGTGC       TCTCTCTGTTGCTGT 100 43
        yvbU  223952 ..  223966 +  -5.7  -2.70932   GTCTTGGCGCTATCG               CGTGT CAGGA ACACG               TCATTGAAACGGCGG  51 225
    PAJ_0187  225503 ..  225516 +  -2.3  -2.78384   CTGGAAGAGGCAGGA               AGCGA CTTG TCGCA                TATCGTCAAAACCAC  40 265
    PAJ_0188 NONE
        argE  227857 ..  227874 +  -4.7  -3.85698   TTTCACATACTGAAA             CCGCCCG CCGC CGGTTGG              TTTCTGCACCAGCAA  57 349
        dsdC  229529 ..  229550 +  -5.1  -4.24342   GCGACGATGCGCCAG           CCTGAGGGGA ATT TCACC-CAGG           TTTGTTGCTGACGGC  66 145
        hexR  234047 ..  234061 +  -7.8  -3.60818   GAGCACCGTTAACAG               GCACCG TTT TGGTGC               TTTGCCCCGTTTTGG  66 29
        fliY NONE
        yckJ NONE
        yhdY NONE
        glnQ NONE
        pucG NONE
        amaB NONE
    PAJ_0201 NONE
        yedX  240435 ..  240455 +  -4.7  -2.52676   GTTTTTCCGCTGCGC            TTGAGAGCT ATC GGCTATCAA            TACCTTCGGCCCATC  46 60
        katG  242745 ..  242769 + -22.9  -4.77165   CAGTAAACGCCTGAA          TCGCCCCCGGC CTG GCCGGGGGCGA          TTTTATTCTGCCAAC 100 35
    PAJ_0206 NONE
    PAJ_0207 NONE
        mtnD  246850 ..  246862 +  -6.2  -2.54896   ACGCTGCCGAAGCTT                CCGG ACACA CCGG                TGACTTCACTGGCGG  48 228
        mtnK  249061 ..  249079 + -14.6  -3.07135   GGCAGGATAAAAAAA             GGCCGACA TGA TGTCGGCC             TGATTGTTTATGCCG  91 31
        gmhA  252381 ..  252401 + -12.6  -3.08046   GTAACAGCACGACTG            GCCTCCTG AGCGG CAGGAGGC            GTTTTGACATAAGGC  83 37
        yafJ  253213 ..  253240 +  -9.2  -2.88544   GGCCGCTTCGGGTTG        TGTGATGACCGG GCTG CTGTTCATCACA         TATCTGCCGCTGGCA  60 41
        dinB  255286 ..  255299 +  -9.5   -3.7659   GCATTGAGTATGTTC               CGCCC GGCT GGGCG                TTATGGTTTTGTTCT  76 107
    PAJ_0220  261890 ..  261901 +  -2.2   -4.4767   AAGCCTTCATCGAAA                TCAG TTCA CTGG                 TTTTGTAATAACTGG  63 106
         gpt  264543 ..  264566 + -18.2  -3.01422   TTGATGTAACACAAA          CAACGCCCGG TTTT CCGGGCGTTG           TGCTTTCTGCGCCTC 100 41
        yafA  265898 ..  265912 +  -6.4  -3.45324   GTTTGCAAAGATAGC               TGGCAA AAT TTGCCG               TGTTTGCTACAACTA  61 27
         crl  266511 ..  266532 + -14.5  -4.25283   GACAGGAAAAGGAAA           GGGCGAGTT TTGC AACTCGCCC            TTTTAATAGACACAT 100 119
        proB NONE
        proA  270517 ..  270538 + -13.7  -6.26417   TTTTTTAAAATAAAA           CGGGGGCCT GTTC AGGCTCCCG            TTTTTTTTTATGCTG 100 46
          CI  271970 ..  272005 +  -6.2  -2.77182   TCGCCAGCCACCCTA    TCGCCAAAGACTCATTC ACA GGAGGAGT-TATGGCGA    TAATTCACTATGGCA  52 419
    PAJ_0230  272987 ..  273002 +  -6.8  -3.55622   CCGTCATCATTATTT              TGCTGC TGAT GCAGCG               TTTCACCACGTTGCA  61 71
        amsF  275536 ..  275553 + -12.7  -6.02546   CGCTGGCAATCCTAC             GCGAGGC TTCG GCCTCGC              TTTTTTTTGCTTTAA 100 41
        FdnG NONE
        FdnH NONE
        FdnI  280783 ..  280802 +  -5.6  -5.68438   GATGCCTCCTGAAAA            CACGCGTC TGTG GGGGCGTG             TTTTTTATTTGGTGC 100 431
        aspH  283189 ..  283200 +  -2.2  -4.66163   CATGCGGGCAGCCTG                GAGG ATCG CTTC                 TTTTTCAATCGCGCT  65 219
        dhaK NONE
        dhaL NONE
        dhaM  289922 ..  289945 +  -5.2  -4.27211   CGCTAGTGTTCATTA          GCCTCTGGTA TCTG TTTCAGGGGC           TTTAATTTATTTGGC  66 41
        shlB  291991 ..  292003 + -10.5  -2.80074   CACGTCAGCATTTAC                GCCCG CGT CGGGC                TGGTATTCTAAAAGA  71 2
        fhaB  303522 ..  303539 +  -2.7  -3.39482   CCTTAGATTCAGGTG             GTGGA AAAATAGA TCCAC              TTATGGGTCATATTG  47 332
    PAJ_0243 NONE
    PAJ_0244  305985 ..  306016 + -17.3  -3.16564   TTTGGTTCGGTGGAT      GGCAGAGCGCGGC TTCCTT GCCGCGATCTGCC       TTCATCAGGTGCGGA 100 54
        nqo2  310350 ..  310361 +  -4.4  -3.74868   TCTCATCTCTAAGCC                TGTC GCGA GACA                 TTCCTTCTTTTTGAG  55 190
        cspB  310887 ..  310903 + -13.7  -5.67283   TTTACCGTAATAAAA              GGCTGCC ACT GGCAGCC              TTTTTTGTTTCCCTT 100 249
        ydeI  312657 ..  312677 + -12.6  -5.69023   GAGCCATAAAAGCGT            GGGCGAGA GTGAG TCTCGCCC            TTTTTTTAATCTTTT 100 32
        cynX  318474 ..  318511 +  -3.2  -2.94924   ACCAGATTGGTAGGA   CCAATCGGCGCGGCTG AAGTGA CAGATGCGCCACCTGG    GTTTGTCGATCGCGC  45 159
        lldP NONE
        lldR NONE
        lldD NONE
        osmC  322727 ..  322746 + -13.6  -3.29947   ATCGTGCCGAATTCA            GATGCGCC TGCG GGCGCATC             TTCGTGTGCTGCATC  91 93
        celA NONE
        licC NONE
        chbA NONE
        yckE  327650 ..  327666 +  -2.9  -3.15544   GCGCCAGCGCGGCCC              CGATTGC CAT GTCATCG              TTACTCGCCATCAGG  43 308
        yaiB  331912 ..  331935 +  -2.4  -2.83519   CAAAAGTCGTCTGAT          TCTTTTCTGG CATG CCAGAATAAA           TACTGTCTTTATCAC  40 91
        psiF  332431 ..  332456 + -17.5  -4.11216   TGTTTATAAGGGATT         GCGCCGCGCGC GTTC GGGCGCGGCGC          TTTTACCCGTGACGG 100 188
        hcaD  334118 ..  334144 +  -5.9  -5.06414   CATGCACTGCTGCAT        GGCTTC-GATCA CGGC TGAACGGAAGCC         TTTTTCTTCCAGCAC  86 120
        yaiI  335920 ..  335930 +  -8.2  -2.75844   CCACACCGCCTGCTA                 CGCC CAC GGCG                 GTTTGCAGTGCGCCG  57 314
        aroL  337212 ..  337244 +    -7  -3.00525   GTATTGACTATACTT     ATCC-CATGGCAGGC AATC GCCTGTCGTGTGGAA      TGTCATTTAGCGAAG  59 78
        yaiA  337473 ..  337486 +  -3.8  -3.53298   AGTAAGCCTCTGCTC               TGGC AAGGAA GCCA                TTGATTTCCCCTGGT  52 36
        yaiE  338084 ..  338099 +    -4  -3.53224   GGTCACGCAGCGTAT              CGC-TGA ACT TCAGGCG              TTTCACCGAGCCGTC  50 204
         mak  340036 ..  340066 +  -7.4  -3.03282   ATCCCGCGCGCTGCT       GACGCTCTGCCAGG CCT TCAGGCACAGCGAC       TCATTTCCTTCCGTT  59 159
        phoB  346215 ..  346232 +    -2  -4.35518   TGCCGTGGCTGCTGT             TACTGA GCGTAG TCGGTA              TTTTACTGTGGCATT  61 146
        phoR  347430 ..  347446 +  -2.1   -2.6795   TTCATTAACTGCTGA              CGGACCG GAA CGATGCG              CCTTCTTTTTTTGCT  39 33
        sphX  348378 ..  348409 +  -2.2  -4.20696   GTTTCCCCGCTCGCC      CACAGCCAAAGG-GG TTA CCGCCTTCGCCTATG      TTTTCCCGTTCCTGC  57 41
        yxjG  349804 ..  349824 + -12.6  -3.35679   CGGAATGTGTGCAGC            GTGGCGCA ATAAA TGCGCCAC            TTGTGCATACAAACC  87 44
        brnQ  351520 ..  351537 + -12.7  -5.37593   TTGATTCTTCTTTAA             CCACGGG CTTG CCCGTGG              TTTTTTCATTTCACA 100 50
        proY  353133 ..  353147 +  -4.9  -3.33696   GCATCAGCGTAAACG               CCCGG CCTGT CTGGG               TTCATTAGCCCGAAG  52 246
        queA  357273 ..  357301 + -14.6  -3.12395   TTGAGCTTGATACCA        CAGACGGTCGCG CGCGT CGCGGTCGTCTG        ATTTTCGATCGTGGC  91 92
         tgt NONE
        yajC  358728 ..  358738 +    -4  -3.05463   TTCTATGAAGGCGCT                 GTAA TTT TTAC                 TTCCCTAAGGGAACT  47 22
        secD NONE
        secF  361602 ..  361626 + -15.8  -6.15717   TTGCATGATAAAAAA          GCCGCCAGTT CAGAC AACTGGCGGC          TTTTTTTTGTCTTTA 100 44
        ybaD NONE
        ribD NONE
        ribH NONE
        nusB  365290 ..  365305 + -11.8  -4.90869   GCAAATAATCAATAA              GGCCGG CTTG CCGGCC               TTTTTCATTAATGGT 100 33
        thiL NONE
        pgpA  366861 ..  366897 +    -5  -3.70902   TCATTTCGTCCTTCA   GCATGATGGCCGTTCCC CTGC GGGAACGGTCTGCC-GC    TTTGCCTGTCAGACA  59 88
        thiI  373007 ..  373028 +  -7.3  -3.48395   ACCGGGGAAACCCGT           CATGTTTCC TACG GGAAACAGG            TTATGTGGCACCAGT  64 323
        yajQ  374900 ..  374947 +  -4.8  -4.35461   CTCACTTCTCGCGTG CAGCGC-GGCGATACAGCG-TGC TGCGC GCAACGCCG-AGCGCCTGCGCCG TTTTGCTGATGTTGC  67 42
        aldA  378433 ..  378449 +  -5.7  -4.19817   TAGTCAGCTATGACA              CGGCACC GCT GGGGCTG              TTTTAAGTCGGTAAC  69 3
        adhP  379554 ..  379573 +  -8.6    -4.652   GCCGGATGAAAAAAA            GGTG-CCTG AAG CAGGGCACC            TTTTTCACGTGGTTT  83 54
        bolA  389055 ..  389068 +  -9.5  -5.22039   TGCCCGCGTTTTAAA               CGGCC TTCG GGCCG                TTTTTTGCGTTTAAG 100 42
         tig  390664 ..  390687 + -13.8  -5.47431   ACCGGTTGTGCTAAA          GCCCGCGCCT GAAA AGTCGCGGGC           TTTTTTCTGTATTAG 100 52
        clpP  391663 ..  391683 +    -9  -2.72031   GGGTTGAATGAACAT           C-GGCCGTG TACC CACGGCCAG            TGCTGTACTTCTGGT  63 93
        clpX  393034 ..  393050 + -10.9  -4.39571   TGTGCCATCTATAAA              GGGGAAA ATC TTTCCCC              TTTTGCATTTCTCAC  91 60
         lon  395571 ..  395599 +   -14  -5.93809   CCGTTAAAAAGCAGA       GCTGGCAA-CACC AATT GGTGCTTGCCAGC        TTTTTTTTGTGCCGC 100 57
        hupB  396104 ..  396124 + -11.2  -5.71712   CTCATGTAACATACG            GGCACATC GATAA GATGTGCC            TTTTTTTATATCCAG 100 102
        ppiD  398186 ..  398201 + -11.8   -4.4874   ACTGAAACAACCCAA              GGCCGC TTAT GCGGCC               TTTTCCATTTTTAAC 100 63
        ybaV NONE
        ybaW  399366 ..  399379 +  -2.3  -4.15222   CAGTAATCGGCCAGC               GCCCA GGTT TCGGC                TTTATTGAGCCACAT  56 283
        ybaO  401680 ..  401706 + -10.1  -2.54955   GTATTTTATCCGTGA         GTGGCGGCGTT ATCTG GGCGCCGTCAC         CTTACTGATCGTTAT  69 91
        mdlA NONE
        mdlB  405172 ..  405183 +  -5.8  -5.04987   CGTTAGTCAGTGCAG                GGTG ATTG CACC                 TTTTTTGCGCATCTT  85 21
        glnK NONE
        amtB  407120 ..  407135 + -11.8  -4.88228   AACGATAAGAGAAAA              GGGGCG ATTT CGCCCC               TTTTTACTATTCGCT 100 50
        ybaY NONE
        mntB NONE
        mntC NONE
        mntA  413633 ..  413644 +  -5.8   -3.9122   GCGCTGGTTAAAGCG                GGCA GTGC TGCC                 TTCTTTAGCAAAGTC  64 279
        acrR  419297 ..  419307 +  -4.6  -4.42806   CCTAATCTTTACGCT                 GCGT GTC GCGC                 TTTCTTTCAAAGTCG  67 36
        ybaN NONE
         apt  421202 ..  421231 +  -7.1   -3.4647   GCCACTAACCCTCGC       T-TGCGGCCTCGAG CTC CGCCAGGCCGCACA       TCTTTCCCTGTTCAA  64 33
        dnaX NONE
        ybaB  423688 ..  423701 +  -2.3  -2.64099   ATGCAGCTGCCACCA               GGCTT CAAG ATGCC                GTTCTGATGCAAACC  39 5
        recR NONE
        htpG  426298 ..  426317 + -10.7  -5.81412   GTAAGCCAATCAAAA            CCGGTGG CAAGGT CCACCGG             TTTTTTTTGCGTAAG 100 37
         adk  427217 ..  427237 + -12.5  -4.13767   TCGGCTAAGCGGATT            GGGGCTGGC CAG GCTGGCCCC            TTTTGCCCTCAACGC  95 33
         gsk  428758 ..  428795 + -14.1   -2.7898   AAGCCGGAAAGACAA   ACTGCCCCTCAGCAACG CTGC CGCTGCTGAAGGGCAGG    TCATTAGCTGTTGCC  88 39
        ushA  433032 ..  433052 + -12.6  -5.40072   CTGCATTAAGTCCAG            GCAGGGAG AACGC CTCCCTGC            TTTTTTTCAGGCGCG 100 32
        ntcB  434559 ..  434594 +  -2.5  -5.40072   AACAGCGTCGCAAAG    GCGTTTGCCGAGCTGT CGATC ACCG-TAGGCAGGCGC    TTTTTTTGGCCCAGC  82 137
        cueR  440615 ..  440625 +  -4.6  -4.65263   CCATCAGCGTTTCGA                 CTCG CTG CGGG                 TTTCTTTTAACAGCT  71 471
        ybbA NONE
        ybbP  447106 ..  447119 +  -3.1   -3.6502   AGCAGGGGCAACAGC               GCATGC AGT GCA-GC               TTTGAGTCGGGGCTG  50 133
    PAJ_0377  450431 ..  450450 +    -5  -3.57144   TGTTTACTGTTGGCG            CGCATGCGT TCT GCG-ATGCG            TTTGCGAATAAACAG  56 254
        cysS  453005 ..  453020 + -10.4   -5.4251   GGGCAACACAGGAGA              GGGCGA GTCA TCGCCC               TTTTTTGTCTATGAC 100 42
    PAJ_0381  454411 ..  454423 +  -4.1  -4.28432   GTGAAACTCTTCACA                TGCCT GTA AGGTA                TTTTCGATTAAGGTT  63 299
        yicN  456085 ..  456095 +  -2.4  -3.87201   GTTCGAATCCTGTAG                 GGCG CGC CACC                 TTCTCTTCTATTTGC  52 188
        arnT  464212 ..  464248 + -10.2  -2.62192   CCAGTATTTTTCATG    CTTAACTCGCCTGAAG TCATT TTGCAGGCGAGTAAAG    ATTCGTTACATCGGC  69 42
    PAJ_0389 NONE
    PAJ_0390 NONE
    PAJ_0391  478950 ..  478972 + -14.9  -4.78848   TTTTCAGCCATCCAA           CGCCCGATG TACTT CATCGGGCG           TTTTATATTTCAACG 100 96
    PAJ_0392 NONE
    PAJ_0393  480569 ..  480579 +  -2.6  -4.60797   AACAGTTATTCAAGG                 TTTA AAA TAAA                 TTTTCTCTGTGGCGA  65 16
    PAJ_0394  481676 ..  481696 +  -8.2  -4.47217   TGAATAAATCACCAA            TCCCGGCC TCTCT GGCCAGGA            TTTTACTTGATCCTT  80 278
    PAJ_0396  485643 ..  485656 +  -5.9  -3.98256   AAACGCAATCTGTTC               CTCGC TATA GCGGG                TCTTTTTCATGGCGA  66 115
        oppA  495111 ..  495122 +  -5.8  -4.07568   GAGTGCTGTTTGCTC                GCTG GGGC CAGC                 TTTTGGCCCCAGCGA  66 79
    PAJ_0399  496779 ..  496793 +  -4.2  -2.77439   GCTATGCCACTGATG               GGCG TGCTTAC CGCC               ATTGCTGTTTTTCTG  45 353
    PAJ_0400  497988 ..  498022 +  -8.4   -3.5013   AATGTATAAAAATAA     TGCCGCGAACCGCCCT GGA AAGACGGTCCGCGGGA     TTCGTTAATTTGAAA  69 144
        yagG NONE
    PAJ_0403  503171 ..  503184 +  -2.3  -3.09273   GCGCGATCATCAGCA               GCGCT GGAT AGCGG                TATATATTCCGCAAC  42 42
        nagC  504817 ..  504830 +  -2.3  -4.13767   CAAAGGGCAGATCGC               GGGTC TTAA GAGCC                TTTTGCCCTCGCGCA  56 385
    PAJ_0407  512225 ..  512241 +  -2.3  -3.80733   TAACAAGAATACGGG              TACATAG CGG CTATTTA              TTCTTATACGATGCA  52 508
        araE  514470 ..  514484 +  -3.6  -4.45723   TTAAGTCTGCTTTTT               TATTGT TAA ACGATA               TTTTAATCTGTTGTT  63 483
    PAJ_0409  515319 ..  515346 + -12.8  -2.60194   ACATTAACCTTCGCA        TGCATGAGCAGA GTTA TCTGCTCATGCC         GTTCCTTGAAAGGAT  81 66
    PAJ_0410 NONE
    PAJ_0411  518511 ..  518524 +  -3.1  -5.13741   TTTATACTTTTGTCT               TGGTG TTAC CACTA                TTTTTATTAGCTTAA  74 84
        mrfD NONE
    PAJ_0413 NONE
    PAJ_0414 NONE
    PAJ_0415  521206 ..  521216 +  -3.2  -2.63858   GACGTATGAAGATAG                 CGTC AGT GATG                 GTTGTAAATATAATG  42 127
    PAJ_0416  523059 ..  523071 +  -3.5  -4.76274   TGTTAATTAGTAAGT                TTTAT TTC ATAAA                TTTTATATTACTTTC  69 409
    PAJ_0417 NONE
         peh  527516 ..  527542 +  -5.7  -3.82455   GTTAACCGCGTGGTG         GGCTGCCCGCG ACTTA CTCTGGCAGTC         TGTTTTGATCTTCAT  64 36
    PAJ_0421  529557 ..  529574 +  -7.7  -4.19746   GCAAAGAGGGGAAGA             GC-GGCAG CAA CTGCCAGC             TTCTTTTCAACTCCA  74 219
        yneG  531635 ..  531649 + -11.4  -5.66684   CTTTAGTGTTAAAAA               CCCACC GAT GGTGGG               TTTTTTTATGGCTTA 100 502
        phoC  534535 ..  534559 + -20.1  -4.58395   CCCACAGATAAAAAA          CATGGGCGGGA ATC TCCCGCCCATG          TTTTTACAGCGTGGC 100 30
        sdaC  537524 ..  537537 +  -3.9  -3.68725   TTCAGACGTATTCAT               TAAAC AAAG GTTTA                TATTTGTTACGAATT  55 104
        fecB  538956 ..  538975 +   -10  -5.13722   GCTTTGACGATAACT            TCCCGATC TCAG GATCGGGG             TTTTATTTTGATGCC 100 281
        yohN  539635 ..  539654 + -13.6  -5.24129   CTCAATAGCGACACA            GGGATGGC CGAT GCCATCCC             TTTTTTATGCACCGA 100 33
        ybjI  540605 ..  540633 +  -6.1  -2.62735   CCGCCCGCACTACGC       TTACGCGCTGACC GGCCA GG-C-GCGCGTAA       TCATGTCGCGCATCT  51 45
        gntT  543398 ..  543409 +  -7.2  -3.26947   GCCGCGCAAACATGG                CGGC CCCT GCCG                 TTAATCTGACGCTTC  62 64
        crcA  545230 ..  545241 +  -5.8  -4.16943   GTGTATTTTGCCTGG                CTGC GCTG GCAG                 TTTTAAGCTCTGGAG  69 8
        cspE  545631 ..  545646 + -11.8  -5.60993   TCAGAATTCTAAAAA              CCCGCC TTCT GGCGGG               TTTTTTTATGCCGGC 100 49
        phnO NONE
        ybeM  547286 ..  547305 +  -3.4  -3.37493   TTGGGCCTGAAACCT            GACGGCGC CGCT GCGCGATC             TTAATCTGTTACAGA  48 68
        tatE  547653 ..  547672 + -10.8  -6.04324   ACAGCCATAAAAAAA            CCAGATTG CGGG CAATCTGG             TTTTTTGTTTTTTAA 100 81
        ybeL  562063 ..  562085 + -19.2  -5.14563   GAGCCGTAAAAGAAG           CAGGCGGGCA GGG TGCCCGCCTG           TTTTTTAGTGCAGAA 100 32
    PAJ_0461  570003 ..  570013 +  -2.4  -4.41494   GCTGGAATACGCCAA                 CGCC GAT GTCG                 TTTTCCTTGCGGGTA  61 130
        ubiF  572806 ..  572837 + -17.4  -3.54408   GACCGAAAGACAAAA      ACAACAAAGCCCGC AGAA GCGGGCTTTGTTGC       TTAATTTGGCTGGGG 100 83
        nagE  582108 ..  582127 + -12.2  -5.79595   GTATCAACAATAAAA            GGCAGGAA GCGA TTCCTGCC             TTTTTTATTTTAAAC 100 47
        glnS  583940 ..  583955 + -10.4   -5.4505   GCAGAGTAATCGAAA              GGGCGA CTTA TCGCCC               TTTTTTATTGCGGCG 100 60
        seqA NONE
         pgm  589732 ..  589746 +  -8.5    -5.626   TGTTAAATGAAAAAA               GCGCC TAAGT GGCGC               TTTTTTTATGGCATA 100 47
        ybfA  590920 ..  590953 + -16.9  -5.43866   GCCCCTGAATTTCTG     GCCCGTTCCCTG-AAT CTT ATTACGGGGAACGGGC     TTTTTTTGAGCATTA 100 64
        ybgA NONE
        phrB NONE
        ybgI  594212 ..  594224 +  -3.3  -2.75022   ATATCCCCAATCCTG                CCTGA TCC TCCGG                GTTCTGTATCACGCG  43 21
        ybgJ NONE
        ybgK NONE
        ybgL  596693 ..  596713 +  -5.4  -5.60864   CAATAAAACAGCACC           GCC-GGGCT GATA AGCTCAGGC            TTTTTTTGGTCTATC 100 35
    PAJ_0485 NONE
    PAJ_0486 NONE
         pcp NONE
         nei  599950 ..  599971 +  -3.7  -3.29385   GTATAAAAAGACAGG           CGG-GCCT GACGGGA AGGCTCCG           TTAATCATTCCGTTT  48 35
    PAJ_0489  600667 ..  600691 + -11.5   -4.4767   TTCGGGCAAAAAAAA          CGGCTATGC CTTGTCA GCATAGCCG          TTTTGTCGTCGATGG  93 113
        sdhC NONE
        sdhD NONE
        sdhA NONE
        sdhB  605879 ..  605903 + -14.3  -4.07885   AGCGCGTAGTTATAC          CACCGGGAACC TCA GGTTCCCGGTA          TTTTACGGAAGCCTC 100 32
        sucA  608859 ..  608875 +  -3.7  -2.60075   GCAAGACCTGGTTAA              TGACG CACTGAA CGTCA              ATTAATTAAAAGGAA  42 4
        sucB  610120 ..  610155 +    -4  -2.94337   CTGCTGGATGTCTGA    TTCATCACTGGGCACGC GTT GCGTGCCCAATC-TCAA    TACTCTTTTCAGATC  47 26
        sucC NONE
        sucD  612253 ..  612268 + -10.4  -5.66684   GGCGGAATGCATTAA              GCCACC TTCG GGTGGC               TTTTTTTATCGCTTA 100 49
        cydA  614434 ..  614444 +  -2.4  -2.72166   CCGGCACGTGGATAA                 GGAG AAC CGCC                 ATGTTTGATTACGAA  39 26
        cydB NONE
        ybgT  615753 ..  615769 + -15.1  -3.69323   TCGTCTGATGGATAA              GGGCCCG TTC CGGGCCC              TTTCACTGGTGCTGG 100 66
        ybgC  616579 ..  616602 +  -4.6  -2.96924   GTCTATTGTCGCGGA          GTTCAAG-CAG TGA CTGACATGAAC          GTTCTTGATTTGTTC  49 13
        tolQ NONE
        tolR  617805 ..  617815 +  -3.2  -2.74012   CATTTCGGTGATTCT                 GCAT ATC GTGC                 TGATTGCGCTGCTGA  42 114
        tolA  619051 ..  619079 + -10.3  -2.72031   TAATGCAGTAACCGG        CGGCAGGTTGATC TAT GGTTAGCTTGCCG        TACTCTAGTTGTACT  69 38
        tolB NONE
         pal NONE
        ybgF  621858 ..  621879 +  -5.1  -3.03124   TTTGTGCAGGTTTGA           CCGGATATC GAGT GATTTCTGG            TCTTGCCGCATGAAA  51 41
         ogt  627135 ..  627168 + -11.9  -2.65384   ACTCTGCCGCTTTTC     CGCTATCGTGTTT AGCATATA AAACACGATGGCG      ATATTTACGTCCTGT  75 60
        nadA  628289 ..  628301 +  -6.9  -3.35597   TAACGTGAAAGGAAA                CGCGT AAC GCGCG                TCTTTGACAGGTGGC  59 19
        pnuC  629315 ..  629334 +  -3.6  -3.16564   CCTCTGCAATATTAT            GCTTCAGAT CGC GTCTGA-GC            TTAGTCACATCCAGC  46 297
        aroG  635429 ..  635449 + -16.9  -4.56597   GGCGCAATAAAAAAA            GGGCCAGAC ATT GTCTGGCCC            TTTTTGCACGGAAGC 100 45
        ybhT  642451 ..  642470 + -10.7  -3.41051   CTAATCCCCACACAA            CGTCCGC CTCAGT GCGGACG             TTGTCCTCGCCCTGA  78 37
        modA NONE
        modB  644030 ..  644082 +  -2.7  -3.26471   GTAAACGGATGGGGG CTTCATGCTGACGCT-GAACATGGC TCAAC GCC-TGGGCGAGCATCAGCTTGAGG TTGATGTGACGATCC  45 15
        modC  645330 ..  645340 +  -8.2   -3.3323   CGGATTCTACCCACT                 GCGC CAG GCGC                 TTGCCTTTGCTGTTG  62 263
         pgl  647112 ..  647149 +  -7.7  -4.83169   GGATAACCTGCAAAT   TGCCGCTTCCGTAATCGT TCG AC-AGGCCGGAAGCGGCA   TTTTTATGCGGCGAT  85 35
        bioB NONE
        bioF NONE
        bioC NONE
        bioD  653030 ..  653040 +  -5.4  -2.73124   AGAGCGCGGGTAACA                 GATC AAA GATC                 ATTTCCGGGATCGCC  47 358
        uvrB  656573 ..  656596 +  -6.6  -2.57501   AACACCATGTTAGCG          GGCGTCCGGCG TAA TGCCTG-CGCC          ATCTCTTTCATGAGC  50 295
        moaA NONE
        moaB NONE
        moaC NONE
        moaD NONE
        moaE  660398 ..  660418 + -11.1  -3.07787   TTCAGATAATCCACC            CTGCTCTGC GAA GCGGGGCAG            TGTTAAGCTACTCTT  74 193
        yaiW NONE
        ybhL  662786 ..  662800 +  -2.8  -3.53012   CGTCTGGCCTTTGAC               CGTC CAGCGGC GACG               TTTCGAAAAGGCACA  48 460
        ybhQ  665948 ..  665971 + -15.4  -3.92832   GAACCGTCCGATAAC          CAAAGCCACC GTAA GGTGGCTTTG           TTGTTTAGGCCGTTT 100 43
        rhlE NONE
        dusC  668492 ..  668510 +    -8  -3.19246   GGTGAAAACCGGTTA             GCGCAGCG TCC TGCCGCGC             TTGGCTTGCCATTAA  62 25
        ydaN  672289 ..  672313 +  -7.8  -4.66953   GGGCACAAAAAAAAA         GCCAG-CCCGG TTAA CCGGTACTGGC          TTTTTACCCTGTTAA  85 70
        yohF  676423 ..  676437 +  -5.6  -3.65046   TTCAAGGGTTACTGA               TCGTCG GCC CGGCGG               TTATTCCAGTGGCGA  59 26
        yohC  677796 ..  677824 + -10.9  -4.59773   CACCTGTTTTAACGT        GCCGTTGCCGCCT GCA GGGCGGCAACATC        TTTTTAACGCTCAGA 100 29
        pbpG  678916 ..  678951 + -12.6  -3.22448   TCTGAAGTAGAGTAA    TATCCCGTCGGGCCGCC GCG GGCGGCCCGACCA-ATA    TTGATCGGTATTCCT  84 26
        yjeP  681507 ..  681533 +   -13  -4.43213   TCCTCGCTAAATAAA         CGGGCGGTCA TTTTCGC TGGCCGCCCG         TTTTACTCTGTTCAG 100 31
        bglX  685756 ..  685779 +   -16  -2.99161   TTCCTGTCGATGTCA          CCGCTTCCCC GTTC GGGGAGGCGG           GTTTATCCTCCGTTC 100 65
    PAJ_0568 NONE
    PAJ_0569  687019 ..  687034 +  -3.2  -3.46141   TGAACACAGAATAAA              CGCC GGAGACAG GGCG               ATTTTTCCTCCTGGT  50 27
         tar  689097 ..  689124 + -15.6  -4.09685   CAAACTGTAATTCAC        AGTCAGGCCAGC GCCC GCTGGCCTGACG         TTTTCGACGATCGCC 100 31
         idi  689790 ..  689813 +  -7.4  -2.90496   CACCGAGCCCTGGCC          GATGCGGTCA GGGT TAGCCGCATC           TGATTTCAGGACAAA  57 42
        yehZ NONE
        yehY NONE
        yehX NONE
        yehW  693833 ..  693868 +  -5.3  -5.31519   AGGCGGGGATAATAG    CGCGCGCAAGGCA GCCGTCATAG TGCCGAGCGTGCG     TTTTTATTTCAGTGT  85 154
        ydcN NONE
         ttr  695924 ..  695956 +  -4.8  -4.36914   CGCCACGGCGGCTGT      GGCCTGCTGTTG ACCCGACAG CACGAGCAGGCC      TTTTCTGAAGCCAAC  67 98
        dinG  698196 ..  698211 +  -3.2  -3.13164   CCGGCACGCGCAAAC              CGCGTGC GAA GCG-GCG              TTAAGTCGTTGCCAC  46 6
        ybiB  699191 ..  699204 +  -5.9  -4.56597   GCCGGCCTTGAGAAA               CTGGC GGCG GCCGG                TTTTTAACGGCGCGC  75 5
        mdlA  703040 ..  703064 +  -5.6  -3.11683   AACGTCCCTAATCTT          TTTGGCGGGA ATCTC TCCCGCCACC          TCTCCTTTTAAATCT  52 30
        gudP  704444 ..  704476 + -12.1  -5.02074   GCGAGCATTTCGCGC      CGCTGTTCCGG AACCGCACTCC CCGGAACAGCG      TTTTTTACCGCATGA 100 48
        hutC  708974 ..  708985 +  -3.6  -3.05596   CGCCACGCCGTGCTC                GCTG CAGA CGGC                 TTGCGTAACGACGTC  46 171
        hutI NONE
        hutG  712908 ..  712935 +  -7.6  -4.07568   AATAGCACACAGCCG        GGCGCCAAGCCGG GTC CCGGC-TGCCTCC        TTTTACCGCACACCG  73 134
        nocT NONE
        occQ NONE
        occM NONE
        hisP  716575 ..  716586 +  -2.2  -2.92618   TGCAGCGGAGTCTGT                GTGA TGAG TCGC                 GTTGTTGTCTGGGGA  42 22
        hutH  718164 ..  718179 +  -3.2  -4.17657   TGGGGCCGCCCGCGC              GCAGAA TCGG TTCGGC               TTTTGCCGTCTGATA  58 112
        hetM  720151 ..  720183 +   -15  -4.35116   TCCCGCATTCGTGAG     T-CGCGCCGCCAG-CA TGA TGACTGGCGGCGCGCA     TTTTGCTCTCCGCTC 100 41
        ybiN  721299 ..  721321 + -15.6   -3.1552   TCTGTCACGATGAGA           CAGCAGCCCG TTA TGGGCTGCTG           TGTTAATCACTCAGG 100 28
    PAJ_0601  722372 ..  722387 +  -5.4  -2.73771   TTTATTAATTGACAG              CACGGCG CCG CGC-GTG              ATTTCCGCAATATAA  47 391
        ompX  726509 ..  726526 + -12.7   -5.1356   TCGAGTTTAAAAAAA             CGGCCCT GTTA AGGGCCG              TTTTTATTGGTGACA 100 51
        mntR NONE
        ybiR  728928 ..  728962 +  -9.4  -2.95192   AACTGGTCGCCTGAC    TCAGACACATCCTGC CGCGGT GCAGGATGTG-CTGC     CTTTCTCAAGTTACG  66 27
        emrA NONE
        emrB NONE
        nodT  733708 ..  733724 +  -3.8  -3.53811   AGACGGGAAGGCAGC              GAATTT AATGC AAATTC              TTTAAAGACGATAAA  52 426
         hns  734432 ..  734455 + -10.2  -5.95539   TCCTTGTAAGCGGTA          GCCGGGTGCA TTTA TGTTCCCGGC           TTTTTTTATTTAAAA 100 50
        ybiT  736330 ..  736351 + -15.9  -3.62011   ATCGTCTAACAAGAA           CGGGGTAGC GATG GCTACCCCG            TTATCGTTTGGGTCT 100 32
        ybiK NONE
        yliA NONE
        yliB  743157 ..  743176 +  -7.8  -4.18401   CACAGCCAAACCTGA            GCGGGC CGTGTAAT GCCCGC             TTTTGCCGTGTGTGC  75 81
        yliC NONE
        yliD NONE
    PAJ_0621  745617 ..  745627 +  -4.6  -2.91924   CGCCGTTCAGGTAAA                 CGGC GCC GTCG                 ATTTCTGGCGCATCA  46 120
        cynT  747866 ..  747890 + -11.4  -3.27382   TTCGAATAACCGCTT          CCGCCCGC TATCTTACT GCGGGCGG          TCTCTTCTCTTCACG  82 32
        yliI  749271 ..  749296 + -11.9  -3.16881   TTACGTGTGCATAGT         CGGCCTGCGCCA GCA TGG-GCAGGTCG         TTCATGGAATCACTG  74 113
        dacC  751323 ..  751340 + -12.7  -5.48303   TTCAGCTAAAAACAG             GGGACGC CGCG GCGTCCC              TTTTTTTAACCTTGT 100 32
        ybjM  754700 ..  754727 +  -9.1  -4.08767   TAACCGATCATCAAG        GCGCG-GCTGGC ATCAC GCCAGCGCGCAC        TTTTCAGGACGTCAG  78 97
        ybjC NONE
        nfsA NONE
        rimK  757209 ..  757225 +  -5.1  -4.66609   CTTTTCAGTGGTTTT              CGTGG AATCTCA CCACG              TTTTTCCGTAAGCTA  75 47
        ybjN  757771 ..  757788 + -11.3   -5.7946   ACAGGATCTGATTAA             GCCGTCA CCCG TGACGGC              TTTTTTTATTCCCGG 100 43
        potF  759376 ..  759415 +  -7.3  -4.57073   ACAGCATATGTTTTG  TGACAGCAACAGAGGC GCAGTGCAG GCCTCTGTTG-TGCCA  TTTTTAGCGGCACTG  80 45
        potG NONE
        potH NONE
        potI  762448 ..  762464 +  -9.4  -4.93296   GCCATTCTATAGAAG              GGCTGG TTAAT CCAGCC              TTTTTATCGTCATGG 100 55
        ybjO NONE
        rumB  764246 ..  764261 +  -6.8  -3.53012   TCTGATTGATTTTCT              GCCAGC TGCC GTTGGC               TTTCAGGGCCGCCAG  58 120
        ybjQ NONE
        ybjR  770051 ..  770064 +  -2.3  -4.07568   CCAAAAACGCCCGCC               AGTGC GACA GCACC                TTTTCCAGCGCCGGG  56 132
        ybjD  775641 ..  775661 +  -8.3  -4.07568   ATTCGCAAGTAAAAA            TGCCAGC ACGGCAG GCTGGCA            TTTTCAACGGAGCGG  76 43
        clpS NONE
        clpA  778911 ..  778929 + -14.6  -5.95539   GACAGAAAGAGAAAA             GGCCGGAT AAT ATCCGGCC             TTTTTTTGTTTGCCC 100 50
         lrp  785948 ..  785971 + -18.2  -4.30104   GAATACATACAGGAC          CAGCGTCGGG TGAG CCCGACGCTG           TTGTTTCTTACTTTA 100 85
        ftsK  789487 ..  789514 +   -15  -5.07107   CTTTGAAACATAAAT        CAATGAGCCAGT TCTT GCTGGCTCATTG         TTTTTTAGCCGTTTA 100 56
        lolA NONE
        ycaJ  791637 ..  791656 + -12.2  -2.71369   GGTCAATGTTTTCAA            CGCATTCC AGCT GGAATGCG             TCCCTTCTTTCAACT  78 61
        serS  793008 ..  793023 + -10.4  -6.15828   TTATTCTCTGAAAAA              CCCAGC GGCT GCTGGG               TTTTTTTTTGGTCCG 100 91
        ycaD  794537 ..  794561 + -13.6  -4.19817   CCTGAAAGGTTCCTG         CGGGGCGGTAG AGAT CT-CCGCCCCG          TTTTCAATACATGAC 100 99
        serC  802260 ..  802277 + -12.7  -3.86495   ATTGCTGACACCTGA             CTCCGCC ATAC GGCGGAG              TTGTCGTTTTTTTGA  93 60
        aroA  803598 ..  803625 + -10.6  -4.26589   ATAACGCCTGAGTCC        TGTGCCCGGTGAG TAT TTCACCGGGC-CG        TTTTCCCTGTCTCAT  85 30
         cmk  804441 ..  804460 +  -5.7  -3.78087   TAAAGCGTTAGATTA            TGCCC-GC AAAAC GCTGGGCA            TTTAACATTTTGGTT  61 1
        rpsA  806273 ..  806294 + -13.7   -3.6502   GTAATCGACCTTGCA           CCGGGCGGA TTTA TTCGCCCGG            TTTCGGTAAAAGCTG  93 37
        ihfB  806650 ..  806667 +  -9.9     -6.13   ACCGAACCGCCTAAA             CGACATC TCCG GATGTCG              TTTTTTTTTGCCTGT 100 47
        ycaI NONE
        msbA NONE
        lpxK  811888 ..  811907 +  -2.1  -3.53012   CCATCTGATAAGGAA            GAGAATG AGCATA CATTCAC             TTTCGCGACAGCAGG  47 46
        ycaQ  813112 ..  813126 +  -5.7  -3.57883   GGATAATTCGTGATG               CCACA ACCGG TGTGG               TTTACCCGCTCTTAT  59 28
        ycaR NONE
        kdsB  814176 ..  814218 + -17.9  -3.01791   CGCTCTTCTGATTAC CCGATTGAAGGATGCGCGCG GCGT CGTGCGCATCCTTCAA-CGC TGTTACGAAGCGGGT 100 78
        smtA NONE
        mukF NONE
        mukE NONE
        mukB  822448 ..  822475 + -12.1  -5.42975   TAGTTAATCTGGTAA        CGGCATTTGTC ACAGGA GGCAAATGCCG         TTTTTATTTGTATAC 100 77
        ycbB  824372 ..  824386 +  -2.2  -3.70007   AGCCGTGCGCAGCAG               TTATTA CTC TAATAG               TTGATTTTCAATCGT  50 14
        ycbK  825130 ..  825154 +  -2.8  -3.45054   TAGTAACGTCGGCAA         CGCTGCG-GGT GCCG ACCATGGAGCG          TTATGAATTATCACA  49 38
        ycbL  825791 ..  825807 + -12.3  -5.60993   TCCTGCAATAAAAAA              TGGGCCA GAA TGGCCCA              TTTTTTTATACGCGA 100 30
        pepN  834311 ..  834338 + -21.4   -3.6106   CTGAATGCCTGATAA        GAAACGGCGGGC AAAT GCCCGCCGTTTC         TTTAACGCTGTTGCG 100 29
        yibD NONE
        rfbX  841752 ..  841764 +  -3.3  -4.19735   AACAGTCTCCCGACT                TAGCG CCC CGCGA                TTTACTTTTGCGCCA  60 57
        pyrD  842883 ..  842915 +    -9  -4.52142   CATTCGCCATAATAA      TGCGCCGGGGGGTT TATTT ATCCCTCCGGCTCG      TTTATATTTTGTCCT  90 43
        ycbW  843600 ..  843621 +    -8  -4.06055   CTGCAACTCAATATA           GTGCCATC GTGACG GATGGCGC            TTTGCTTTAAGGCGT  73 76
        ycbY NONE
         uup NONE
        pqiA  850139 ..  850153 +  -2.8  -3.33315   AGCGCTGGTCACCGG               TATGGA TCG TCCCTA               TTGTCACGCTGTTAA  47 70
        pqiB NONE
        ymbA  852491 ..  852515 +  -4.3  -5.27335   CGAGTAAAACAAAAG          GGTGGCTGA ACATTTA TTAGTCACC          TTTTTCTTTCCACCA  80 211
         rmf  852758 ..  852776 + -11.7  -4.61873   TGAAAAGGGATATAA             CCTCCGC ACTAA GCGGAGG             TTTTCGTTTCTGGGG 100 52
        ycbG  855852 ..  855867 + -11.8  -5.14563   TCAGGCCAAAAAAAA              CCCCGC ATAA GCGGGG               TTTTTTCATAACGGA 100 101
        yccR  858749 ..  858779 +    -6  -4.52589   GGCTCGGCGGTCAGT       TGCGCGATGCGCTG CAC CAGCTCAATACGCA       TTTTCTCTGCCCGGC  75 134
        helD  863482 ..  863503 +  -7.9  -3.02144   ATAAAATCGGCGGTC           GCCCGGTTG GTGG CGACCGGGA            TATTCCAGACCGTCG  56 124
        yccU  865137 ..  865162 +  -5.4  -3.13403   GGGGCAATAACAATA         G-CGGCGGCAA ACAGA TTGCCGCCCAC         TGTTAGTGACGCAAA  52 31
        yccX  867484 ..  867499 + -11.8  -3.25823   CAGAAAAAGCAAAAA              CCCCGC CTGA GCGGGG               TTCGTATCGCGCCAG  79 416
         agp  870578 ..  870593 + -10.4   -5.4505   CCTGAAAAGAAAAAA              CCCCGT CGAG ACGGGG               TTTTTTATTGCCGGA 100 53
        yedA  874407 ..  874428 +  -5.1  -3.21395   AAAGGATGACGCGAA           GGCGCGA GTCGGTTA TTGCGCC            TGTTCTGAGAGAGAT  52 47
        ycdC NONE
    PAJ_0736  876220 ..  876237 + -12.7   -4.2704   AGTTATAAAAAAAAA             GCCCGAC TTTT GTCGGGC              TTTCTTCATGCTGGG 100 33
    PAJ_0738  878912 ..  878922 +    -4  -4.08216   TTATTGATTGTTTTT                 TACA GGC TGTA                 TTTTACCCCCGCTCA  60 309
        sdiA NONE
    PAJ_0740  881013 ..  881032 +   -15  -3.10464   GCACGGTTGAGTTTA            TGCCCCCG GTGA CGGGGGCA             TCTTAGCGTTACTGA  91 31
        uvrY NONE
        uvrC NONE
        pgsA  885036 ..  885050 +  -2.8  -3.57263   CCAAGGTCGGGGTCG               CGAG TTCGAGT CTCG               TTTCCCGCTCCAAAT  49 265
    PAJ_0750  891705 ..  891728 +    -8  -3.06183   GTCAGAAAAGGTGAA          CGCCCCGGGT TGCA GCCTAGGGCG           TTCGGTGCGAGTAAA  60 63
    PAJ_0751  893208 ..  893221 +  -3.8  -3.17194   CCCTATGAGCGCCCG               CCAG AAAACG CTGG                TTACCTTGAGGCAGT  48 221
    PAJ_0752  894853 ..  894867 + -12.8  -3.25475   AAAATGAGTAATTTT               GCGCCC TAC GGGCGC               TCTTAGTATATTAAA  84 467
    PAJ_0753 NONE
    PAJ_0754  898406 ..  898423 + -10.5  -5.37593   TTCTTAAATTATAAA             CCTCGCC AGAC GGCGGGG              TTTTTTCATTTCCAC 100 522
    PAJ_0755  900328 ..  900340 +  -4.1   -3.7108   ATCCAATGATGTTCG                GTGAC AGC GTTAC                TTTGAATGTGCAGCT  55 58
    PAJ_0756 NONE
    PAJ_0757  901725 ..  901739 +  -2.8  -2.72839   GTTGAATATGAGAAA               TTTGCA TTA TGCAAC               TAATTAAAAATAATT  41 8
    PAJ_0758  902204 ..  902219 + -10.4  -5.43414   TTTTTTTCAAAAAAA              GCCTCC TTAT GGAGGC               TTTTTTATATATGGT 100 47
    PAJ_0759 NONE
    PAJ_0760 NONE
    PAJ_0761 NONE
        clpP NONE
    PAJ_0763  909181 ..  909196 + -11.8   -4.9725   GGTTCGTAACCATCA              GCGGCC TTAG GGCCGC               TTTTTCTCTCGGGAT 100 32
    PAJ_0764  910573 ..  910583 +  -2.4  -2.52543   TCCTTCCCCCTTTAT                 TCGC CCG GCGC                 TGGATTACAACAAAT  39 345
    PAJ_0765  911155 ..  911171 +  -7.9  -3.95584   TAGTTCATTAACAGT              GCCGCTG TCA TGGCGGC              TTTAATTACTCAGCA  70 38
        Gp15  915548 ..  915563 + -10.4  -5.64274   TGTCACGATATTACA              GGACGC TCAG GCGTCC               TTTTTTTATGGGTGA 100 387
    PAJ_0767 NONE
    PAJ_0768 NONE
    PAJ_0769  917676 ..  917691 + -10.4  -5.64274   TTTTGATTACCACAG              GCCACC TTCG GGTGGC               TTTTTTTATGGGTGA 100 44
         gpJ  921053 ..  921082 +    -2  -2.75064   TTTGCCTTCTGGCTA       CTCCCTGTCTTA CCTGCA TCAGGCCGGGGG        TAATTACATCGGGAG  40 162
        gp23  922227 ..  922244 +  -9.8   -5.4505   CCTTATCCTACAAGA             CCCGGC CTCCGT GCCGGG              TTTTTTATTGCCCGG 100 359
    PAJ_0772  923579 ..  923592 +  -4.5  -3.55761   AATCACTAGACTGAT               CCTGT CTCA GCAGG                TTTACGGGGTGGGTG  55 58
        umuC  925319 ..  925336 +  -8.4  -4.60889   GCAGGCAATAAAAAA             GCAGCC GTAACA GGCTGC              TTTTTAAGGGTAATT  83 87
        yrhK  928597 ..  928610 +  -5.3  -2.79809   TTTTTGAGATACTTC               TCATC TCAC GATGA                TGATTCGGCTTTTTG  49 482
        slyA NONE
        yebQ NONE
        emrA NONE
        oprM  937270 ..  937286 +  -7.2  -2.93393   CACATTCCGGTCGTG              CCGCTC CATCA GGGCGG              GTTTGTAAAATAACG  59 78
        ymdC  940498 ..  940517 + -13.6  -3.51597   GCTGCTTTGAAGCAA            GGCGATCG GCAG CGATCGCC             TTATCATTAGCGCTT  91 31
        mdoG NONE
        mdoH  946025 ..  946040 + -10.4  -5.40474   GTAGCAACGAAGAAA              GCGGCA GAAA TGCCGC               TTTTTTTACGCCCGT 100 37
        yceK  946436 ..  946446 +  -4.6  -2.90751   ATCGTCTTCCCATTC                 CTGC GCC GCGG                 CTTTACCTTCTTCGC  46 61
        ybjK  949758 ..  949772 +  -4.2  -3.61894   CATGTACTGTTCAGG               GGCG ATGAGCA CGCC               TTCTTCAACCACCTT  54 121
        yceA  951923 ..  951961 + -13.8  -3.16564   GCCAACCCGCAAATA   GCCGGAGCCGCCTGAAGC CTG GCTTCAGGCGGCTTAAGA   TTACTGACGTACGCC  88 25
        rimJ NONE
        yceH NONE
        mviM  960191 ..  960217 +  -2.1  -3.31144   TGGTCGAATCGATGT         GGCGCGATGCC GAACG GGAATAACGCC         TTGTAACACTCAGCA  45 3
        mviN  961919 ..  961943 + -17.2  -5.38549   GTCACCTGTAAGCAA          GGCCGCAACG GCGCA CGTTGCGGCC          TTTTTGTTGTTTAAC 100 72
         trg  964190 ..  964214 +  -8.5  -5.03314   GCGGACACAAAAAAA          GCCATCTTCTC AGC GAGATGACGGC          TTTTTTACGCCTGCC  93 295
        flgB  966354 ..  966369 +  -3.2  -3.50466   TGAGCGTGTTACAAG              GGCAAT AATT ATGGCC               TTGCTTAATATTTTT  50 18
        flgC NONE
        flgD  967453 ..  967472 +  -4.2  -2.84414   CGTCAGATTCTCTGA            TTCACCTG TAGA CAGGAGAG             GTTTAAATGTCATTT  45 26
        flgE NONE
        flgF NONE
        flgG  970365 ..  970377 +  -3.3   -2.5294   TAAGGTCGTGACTCC                GTGGC GAT GCAAC                ATATTCTCAAGCCTG  42 85
        flgH NONE
        flgI NONE
        flgJ  973191 ..  973204 +  -3.7  -3.01712   TAACAGCAAGAGCCA               GGCGC GCCA GCGCA                TGTTGGCGACCACAC  45 78
        flgK NONE
        flgL  975919 ..  975947 + -16.8  -5.81412   GGTGCGCTTAGTTTT        TCCCACCGTCCT GATAA GGGACGGTGGGA        TTTTTTTTGCCTGCA 100 64
        rluC  980984 ..  981015 + -13.1  -2.57683   GAAAAGCTGACGCGC      CGGGCATCAATCC GACAGG GGGTTGATGCCTG       CTTCTCGCAGCATAT  81 31
        yceD NONE
        rpmF  982461 ..  982491 +  -3.8  -3.08133   TACCTTGGCACGTTT       GACCCTGGCTATCG ATG CCATGGGCGGGGAC       TTCGGTCCCTGCGTG  47 62
        plsX NONE
        fabH NONE
        fabD NONE
        fabG NONE
        acpP  986537 ..  986562 + -15.5  -4.78848   AGGCTAATGAATATC         TTCAGGCGGTC ATAT GACCGCCTGAG          TTTTATGTTTGCCCC 100 34
        fabF  987853 ..  987867 +  -2.9  -2.81547   ATTTTCCGTAAAATC               TAAAC ATTCC GTTTA               TGATTGCTGTAAAGG  42 23
        pabC NONE
        yceG NONE
         tmk NONE
        holB NONE
        ycfH  992272 ..  992302 + -16.3  -4.67982   TACGAGATTATGTTC       GTTGACCCTGTTG TGATT CGACAGGGTCAAC       TTTTATTGGCTGAAA 100 70
        ptsG  993986 ..  994011 + -14.1  -5.75342   CTGGCACGGCGAAAA         CAGCGTTGAGT CTCG GCTCAACGCTG          TTTTTTTTGCCCGAA 100 55
        ycfF  996424 ..  996437 +  -3.1  -3.35197   CTGAAGGGAACCTTG               CTATG CGTT CATGG                TTGATATGTCTGCCC  47 44
        ycfL  996835 ..  996850 +  -6.8  -4.16305   GTTAACCGTACTGGC              GCGCTA ATGA TGGCGC               TTATTCTTTCTGGCT  71 63
        ycfM  997562 ..  997587 +  -4.7  -2.53263   ATACCTTTCGTCAAT         CGCCAGCGCG AAGGGCG CGTGCT-GCG         TAAATTGCGGCTGAG  46 183
        thiK NONE
        nagZ  999275 ..  999287 +  -4.7  -2.86432   AGCGACGTGGTAATC                ACGGG TTG CCCGG                TGTGATGATCTTCAA  47 28
        ycfP  999854 ..  999886 + -13.4  -3.33261   AAAAAGGCAGATTGA      CGCAACCGGGCGCC CATGC GGTGCCCGATTGTG      TTGTCGGCGTTACCA  91 26
         ndh 1001496 .. 1001508 +  -4.8  -4.68705   AAACGTGGCACTAAC                GCGT CAGGC ACGC                TTTTCTTCCCATTGT  73 151
        ycfJ 1002258 .. 1002275 + -11.3  -5.64274   CCATGAAACACGAAA             GCGCATC TCCG GATGCGC              TTTTTTTATGGGTCA 100 82
        ynjA 1003481 .. 1003500 + -12.8  -3.21695   GCAGGCATAAAAAAA            GCCGCCCT GAGC GGGGCGGC             TTCGCTTGATGCTGG  84 94
        lolC NONE
        lolD 1009252 .. 1009262 +  -5.4  -3.61398   TGACGGCCAGTTAAG                 CGAT CGC ATCG                 TTCTTGCGGGAGCGG  56 173
        lolE 1010581 .. 1010598 +    -4   -4.1891   ACCTTAAACCGACCA             CCGGGC CTCATC GCCCGC              TTTATATTGACCCGC  62 80
        npdA 1011506 .. 1011522 + -10.8  -3.13403   GCCACCGGATTAATC              GCGGGC TACTC GCCCGC              TGTTCATCCAGACAC  76 49
        pepT 1013303 .. 1013330 +  -2.6  -3.25823   CACAGCCATGACCGC        CGG-GTGCGCG CATTCAA CGCGTTCGCCG        TTGATATAGACGGCA  44 225
         icd 1022399 .. 1022426 + -13.6  -5.18371   GCCTTGCCTGATCCA        GCCAGCATAGAT CTCA ATTTATGCTGGC         TTTTCTTTTCTCCAA 100 46
    PAJ_0864 1024168 .. 1024191 +  -8.1  -4.58242   CTTGAAAATATCTCA          GGAGGAAGG GGTAAG CCGTCCTCC           TTTTATCGATTTTTT  81 36
        ubiF NONE
        uidR 1034721 .. 1034731 +  -2.4  -3.28712   ATAAACACCGGTCCT                 CAGG AGA CCAG                 TTCTGCCAAAAGGGC  44 305
        yegT NONE
        yegU NONE
        yegV 1045415 .. 1045428 +  -2.3  -4.58283   GCAATGTCATCTTCG               CAACG GATA CGATG                TTTTTGCAGCCATTC  65 385
        proP 1047179 .. 1047196 + -12.7  -4.17523   GGTATGAGGGTAAAA             CGGGAGC CAAC GCTCCCG              TTTTGAGACTTATTT 100 34
         bls 1050482 .. 1050498 +  -9.3  -3.15663   CGCTGCTGGATACGC              GCCGCGC CGG GCGCGGA              TTCATGCCAGTGGGT  63 468
        mltE 1052439 .. 1052483 + -16.6  -3.09516   TAACAGCTGATCCCC ATGTTTTCTCCTCACCTTCC TTTTT GGCAGGTGAGGAGAGAACAG TTAAGTGGTCAGCAG 100 31
        tktB NONE
         dxs NONE
        glpK 1057001 .. 1057024 + -11.8  -2.56596   ATAAGAGCTGAAAGA          GGATCG-GGCA GCG TGCCGCGATCC          TCCGTTCGTCCCGGC  75 37
        yeaQ 1059491 .. 1059514 + -19.6   -5.0916   CATGATGTAAAAAAA          GGGCCCGCAG GTGA CTGCGGGCCC           TTTTTATATTGGCCA 100 48
        ycdW NONE
        ycdX 1063132 .. 1063146 +  -5.6   -2.6172   GTACTGGCAAACCTA               TCGCCG AGC TGGCGG               ACTTTTAATTTATCT  48 3
        ycdY 1064051 .. 1064101 +  -9.2  -3.07994   GCCATCAGGTAGCCA GTGGCATGATCCAGCGCCTGTACCG GAAG CGGTACCGGCGC---ATCATGCTGC TTCCATCGCATTCCC  63 325
        guaA 1067255 .. 1067267 +  -5.5  -2.76492   GCTTAACTTTTGCGC                CAGCG CGC TGCTG                ATTTCAAATACGTCC  47 322
        aldA 1069272 .. 1069294 + -14.1  -3.73587   TTCTTCTGACCCTGT           GCGGCGTGC CTTAT GCGCGCCGC           TATTTTCCGTCTGTT  95 32
        oxdD 1071313 .. 1071335 + -13.5  -3.31799   GTGGTGAAATAACGC           TCATGGCCG CATGT CGGCCATGA           TTGTCACAGGTTGTG  91 29
        nuoL NONE
    PAJ_0911 1083518 .. 1083541 +  -4.5   -4.6759   AGGAGGAGACATCCA          CCGTTTTCC TGATGC GGATAGCGG           TTTTGTTGGCGTCTT  73 485
        nemA 1084927 .. 1084939 +  -3.3  -3.61398   TTCGATCAGTACGGT                GTCTG TGC CAGTC                TTATTCAGGACAAAG  50 166
         tar 1089922 .. 1089934 +  -3.3  -3.92641   CACTTCCTTAAGACC                GTGTG TCA CTCAC                TTTATAAATAAAATT  55 366
    PAJ_0916 1090703 .. 1090713 +  -6.8   -3.4285   CGAAAAGCGGACCAA                 GCGA GTT TCGC                 TTATGAGTTGAATAA  59 126
    PAJ_0920 1095499 .. 1095509 +  -4.6  -4.24404   AGGCTTAGCGAAAGA                 GGGG AGT TCCC                 TTTTCGACTTTCACT  64 40
        ydhM 1105577 .. 1105596 +  -6.4  -4.32046   CGGCCAGTTTGGTAG            CGCTTTCA TTAG TGGAGGCG             TTTGCTTTTTGAGCG  74 514
    PAJ_0927 1107244 .. 1107255 +  -2.2  -3.10244   AACATGAATCCCAGT                GGTT GATC AGCC                 TGATTTGTTGCAACC  43 307
    PAJ_0928 1108592 .. 1108606 +  -2.8  -3.27364   CGGGCAGGGGGTAAG               GTGGTT GCA AACGAC               GTTGTTTCTTTTCTA  47 52
    PAJ_0929 1109333 .. 1109349 + -13.7   -5.4492   CATCCCTTTCATAAT              GCCCGCA TTG TGCGGGC              TTTTTTGTGTCTGTC 100 94
    PAJ_0931 1112589 .. 1112599 +  -2.4  -2.97667   CAACGATTAAAAGCC                 CGCC GCA GGCC                 TGATTTAGTCCCTCC  42 12
    PAJ_0932 NONE
    PAJ_0933 1114866 .. 1114892 +  -8.8  -3.86015   AAAACCCCGTGCTTC         TAATGGTGGGAG GTG CTCATACCATTA         TTTATGGAGAGAGTG  73 381
    PAJ_0936 1121917 .. 1121931 +  -2.8  -4.21194   GGTTGAATGAGCCTT               CCATTA CAA TAACGG               TTTTGCCTCCTACCC  59 129
    PAJ_0938 1123611 .. 1123635 +  -7.1  -4.21194   AATATGGTACATCGC          CCGGACGTG AACGAAG CACGTCCGC          TTTTCGCTCATAGCG  73 149
    PAJ_0940 1125294 .. 1125334 + -11.9  -2.85124   ATCAAAACGCCTATC  CAGGCCAATACAGGGCGGT TCA GTCGCGCTGTATTGATCTG  ATTTGCCTCATTTTC  76 321
    PAJ_0948 1133593 .. 1133610 +  -4.1  -4.74103   CTCAGGCAGCGTTCT             GTACGTC ATTT GACGTAG              TTTTTGAGTTACCGG  71 8
    PAJ_0949 1134350 .. 1134363 +  -4.5  -3.04517   AGGTTAAAGGATGGG               CTCAG CTAA CTGGG                ATTTTGACAAGCCAT  49 34
        tibC NONE
    PAJ_0951 1140269 .. 1140288 +   -15  -3.86194   ACGACAAATGATAAA            GCCGGGCA TTGC TGCCCGGC             TTTATCAGGCAACTT 100 42
    PAJ_0953 1142317 .. 1142328 +  -4.4  -3.80625   TACCAGATTAAAGAC                CAGT TACG ACTG                 TTTAAGTTCTGAAAC  57 108
    PAJ_0954 1144027 .. 1144053 +  -8.1  -2.76442   CAACTGCGCCGCAAA        G-GTCCGCT-CTG TGC CAGGAGCGGACGC        TGCTTGCATCATGGT  59 241
        yceI 1145745 .. 1145765 +  -5.4  -4.57073   CTTGAAAGCGCCCCA            CGCCGTTA AGCGC TAAGGGCG            TTTTTCAGGGCGCTG  73 36
        gyaR 1149756 .. 1149772 +  -2.9  -3.36492   GGACGCACGTTTGTA              TTAACGC CGG GCGTGAG              TTATCAGGTTGCCGA  47 259
        yveA 1152163 .. 1152186 + -16.8  -3.53343   TAGTGTTTATCGCCT          GCACCTGTGC TCCG GCACAGGTGC           TTTAGCGGCAGCGTT 100 38
        yajD 1154309 .. 1154340 + -19.6  -3.14132   CTGCACGTTGCGCTC      CCCATGCCCAC-CAG CCA CTGTGTGGGCATGGG      TTCGTACAGCAACGG 100 183
    PAJ_0966 NONE
        metE 1156620 .. 1156640 + -16.9  -5.24129   CTGTGTATGAGCAAA            GGCCCGATC GGC GATCGGGCC            TTTTTTGTCACCCAG 100 66
        pad1 NONE
        vdcC NONE
        kdpD 1161257 .. 1161277 +  -6.2  -3.50555   CGATGTCCTGAAAAG           CGGCA-TAG CCAC CTAATGCCG            TTCCTCTTGTTTGCG  56 372
        xylE NONE
        mocC NONE
        ydgJ 1167702 .. 1167738 +  -3.3  -3.83026   TTATAAAACATAAAC    ACGGGATCGGCGCGCCG AAC CAACCCGCCGCACCCGA    TTTACTGTAGAAACA  55 225
         tsr 1170801 .. 1170818 +  -7.7  -4.15543   ATAGCTCGATGAAAA             TGGCTCA GGGC TGAGCCG              TTTTCAGGCTATTTC  75 89
    PAJ_0980 1174898 .. 1174916 +  -3.8  -3.66844   TGATGGCGCGAAAAT             GCAGGTAA TCA TTACTGGC             TTGTTACCCTATCCG  55 89
    PAJ_0981 1177934 .. 1177957 +  -8.2  -3.28712   GATTGTTGCCAAACA          TCGCGCCA-GA AGC TCGTGGCGTGA          TTGTAGAGAAAAAGA  66 366
    PAJ_0982 1181427 .. 1181453 + -10.2  -3.91911   ATAGTTAATCTTTAA         GCATTCAGGG ACGAATC CCCTGGATGC         TTTCATTCAAATGAA  82 37
        ychH 1185750 .. 1185788 + -14.1  -3.33815   TCCGATTTCTGCCCT  TGGCTTTGGCGCGATAGA GTGC TTTATC-CGCCAGAGCCA   TTAGTTGACCAAAAT  83 70
        hemA 1191086 .. 1191121 +  -4.7   -2.7535   CCTGCAGATTTTACG    CGACAGC-CTGGGTCT CAATT AGGCACACTGCTGTCG    TCATCTGTTACGGGA  47 4
        prfA NONE
        hemK NONE
       sirB3 NONE
        ychA NONE
        kdsA 1195214 .. 1195253 + -16.8  -3.05715   AAGCCAGCGGCTGCC  GATAAGAAAAAAGAGCGA ATAG TCGCTCTTTTTTTTTGTC   TTGGATCAGCGGATT 100 39
        chaB 1197057 .. 1197071 +    -7  -3.37796   CTGCCAACGCGGGCG               CGGCAG CCT CCGCCG               TTGTCCCTCATGCGC  62 128
        chaC 1198105 .. 1198121 + -10.1  -3.52475   ATCCTTGAGCAAAAC              GGGTAGC CAG GCTGCCC              TTATCCTGTATTGCC  77 49
        nasR 1208994 .. 1209031 + -15.5  -6.08342   AGTGCTTTGGATAAA   GGCGTCCGTCCCCTTGC GAGA GCAGTGGGGAGGACGCC    TTTTTTTATTTCTTC 100 218
        nrtA NONE
        nrtB NONE
        nasD NONE
        nasB NONE
        nasA NONE
        cysG 1219868 .. 1219893 +  -3.3  -3.57144   AAGCTGGCGGCCTTG         TCTCCGGACGTT GAA AGCGTC-GGAAA         TTTAAAGGTCCCGCC  50 381
        bacC 1221467 .. 1221505 + -12.5  -2.83592   GGGCCGACCTGATGA  TC-GACGGTGGCTTTACC ATCT GGTAAGGCCACCGCCAGG   CTTCGTTTTCCTCTG  80 0
        rbsB 1222485 .. 1222525 +    -4  -2.62184   CTACAAGTCGTAATC CATTGTT-GTCGCGCCCGT ACTG ACGGGCGCCAGGGAGAATG  TCATGTACAACCGAC  44 28
    PAJ_1018 NONE
        rbsA NONE
        rbsC NONE
        fabG 1226657 .. 1226673 +    -3  -2.52606   ATCTGGGTCACATTA              TGCTAA AATAA TTAGCG              CTGGTTTTATCATTC  40 114
        ychO 1228556 .. 1228581 +  -8.9  -4.13945   TGGCGGATGAAAAAA         CGGCCCG-TCAG ACA CAGGCCGGGCCG         TTTTGCAATGAGGGT  80 402
        argM NONE
        astA NONE
        astD NONE
        astB 1235630 .. 1235640 +  -2.4  -4.07568   CTGCCATGAGGGCTG                 CCCG CTT CCGG                 TTTTAAGGAGGAACG  55 49
        astE 1236670 .. 1236687 + -11.3  -3.78775   TATCCAAATAAAAAG             GCGGAAG ACAC CTTCCGC              TTTACTGCTAAAGGC  81 44
         spy 1237458 .. 1237496 + -17.4  -5.80817   AAACACGGTTGAAGA   CCGCCGGCCTTGTCCACG TGA TGTGGGCAGTGTCGGCGG   TTTTTTTATGTTAGA 100 58
         tar 1241498 .. 1241512 +  -7.1  -4.72272   GGCAGCGGCGGGTGA               CGCTG ACTGG CAGCG               TTTTTAATCGGGAAC  83 4
        osmE 1244324 .. 1244345 + -13.7  -5.96219   GCTTTAAATAAGAAA           CGGCTCGCC ATTG GGTGAGCCG            TTTTTTTTATAGCTA 100 47
        yniB 1248972 .. 1249002 + -10.5  -3.57144   ACAATCAGCTCGGCA       TTGCCGTAGAGAA TGCCT TTCTCGGCGGCAA       TTTGCAGCTGCCAGC  74 421
        ydiY 1250993 .. 1251017 + -13.5  -5.92337   GATGTCTGAAAAAGC          GCGGTCTGGCA CAG TGCCTGGCCGC          TTTTTTTTGATCTCT 100 51
        thrS NONE
        infC 1253716 .. 1253739 + -12.4  -4.45738   TTCAAGTAGCAATGA          CCGCGCAGCG CTTG CGTTGTGCGG           TTTGTTGTTCGCCTG  95 44
        rpmI NONE
        rplT 1254613 .. 1254629 +  -9.4  -6.20267   AAAATCGCGCTGAAA              GCCTCC CACGT GGAGGC              TTTTTTTGTTTTTGG 100 242
        pheS NONE
        pheT NONE
        ihfA 1258414 .. 1258443 + -13.7  -5.20328   ACTGATCCCAGTGTT       TCAAAAAGGCCGC GCAA GCGGCCTTTTTCA        TTTCTTTTTTTCGCA 100 36
        btuC NONE
        btuE 1260112 .. 1260154 +    -6  -2.78384   CCATCCCCGGACGGC TGCAACCGGTGAGCGGCACG ATG CAGGCCGGGCAACGGGTGCA TCTGGTGGGGCCGAA  52 66
        btuD 1260835 .. 1260848 +  -4.5  -2.57092   GAGACTTGCCACCTG               GCGCGC TTT GC-CGC               TACATTAATCCGGTT  46 39
        nlpC 1261352 .. 1261371 +  -7.8  -3.89614   GCCGCATCTAATTTC            TCCGCTGG AAAA CCAGTGGG             TTTGTGCGGATTAAA  70 193
        ydiV 1262414 .. 1262424 +  -3.2  -3.22113   TCCTGGTCATCAACG                 CTAC ACT GTGG                 GTTTTATCACACGAT  46 67
        ydiU 1263967 .. 1264017 +  -2.3  -4.90013   GTCCTGCCAGCTGAG GCAGGGATCGGTGATCGACTGAC CGTAA GTCAGGGGTTCACCGCTCACCAC TTTTTGATTGCCTTC  72 93
        ppsA 1268758 .. 1268773 + -10.4  -6.31682   CTCCGATGCCAGAAG              GCCAGC GCAA GCTGGC               TTTTTTTTTGCTTTT 100 54
        ydiJ 1273781 .. 1273796 +    -9  -2.87683   TCATCGCCGTTCAAC              TGGCAG ATCT CTGCCA               TGTCTAAACAGGTAT  65 286
        sufA NONE
        sufB 1276205 .. 1276217 +  -3.3  -2.71364   AGCCATCAGCCTTGA                GCACA GTG TGGGC                TGATTGACGCCGTCA  42 10
        sufC NONE
        sufD NONE
        sufS NONE
        sufE 1279940 .. 1279955 + -10.4  -4.84527   AAGATACACTTCAAA              GACGCC ATCC GGCGTC               TTTTTACTATCTGAC 100 39
        ycfS 1281001 .. 1281019 + -10.3  -4.56597   TGCAGACAAAAAAAA             TGGTGCC ACAAG GGCACCA             TTTTTAAAACCAGAA 100 63
        ribE 1286039 .. 1286063 +  -4.1  -4.07687   GCGTTGCCCACAGGC          CAGCAGGTTGC CGT GTCGCCCGCTG          TTTTCCAGGACGACT  60 78
        ydhB 1290111 .. 1290123 +  -9.1  -2.64218   CAGGCGTGAAATAGC                GTGCG TTG CGCAC                ATTATCGTAGCCAAT  63 207
        ydhD 1292918 .. 1292934 + -13.7  -4.84642   CGGAATAATAAAAAA              GGCCGAC ATC GTCGGCC              TTTTCTTCGTTTAAC 100 33
        ydhF NONE
        sodC 1298018 .. 1298028 +  -6.8  -4.30978   GCGGCATCGGTTGCC                 GCCA GCA TGGC                 TTTTCGTACGTTGAA  71 53
    PAJ_1086 1298650 .. 1298679 +  -4.2   -4.2231   CGTAAGCGCCACAAC       AATCCGGCAAGC GTTTCG GCTTCCCGGGTA        TTTTCCCTGATCGTT  65 81
        slyA 1302295 .. 1302316 +  -6.5  -3.08813   CGACGCACAGTGCCC           GTCACCGGC GTCG GTGGGTGAC            TGTATTAGCGTGGAG  55 44
        ydhH 1304627 .. 1304651 + -11.5  -4.52589   TGACACAATCTGAAA          CGTGCTACTAA TAT TTAGCAGCACG          TTTTATGTCCGGCAA 100 443
        uvsE 1319512 .. 1319538 + -14.4  -3.68351   GGGATGGGTTTCTGC         CGCCAGCGAGTG TGT CCTTCGCTGGCG         TTTCCCTGCTGACAG  95 322
        blaA 1324557 .. 1324569 +  -5.5  -5.28481   TGTTAAAGATACTTT                CTGTC CGT GACGG                TTTTTTAATTCCATG  85 424
        umuD NONE
        umuC 1327152 .. 1327176 +  -2.7  -2.64155   GCGATTTGCCCGTGG          TGAAGTGACGG CGG CCGTCGTGACA          TCGGTTTCAGGCGCG  41 18
        hchA 1328181 .. 1328203 +  -6.3  -3.35798   GCGCCCTGAGCGGTC          GCCTGCAATG CCTT CGT-GCAGGC           TTCTGCATCAGGGCT  59 53
        yezE 1328946 .. 1328969 +  -4.7  -3.28791   ATTAACATTTGTCTA          TTTAGGAAG CGAATA TTTCCTAAA           TTATAGCGCGAAGAT  52 36
        yedX 1332106 .. 1332124 +  -5.2  -3.33631   GCTTCTCCTGCAGGG             TGGCGG AACGCGC CCGCCG             TATTCGTCTTTATTC  54 139
        ydhA NONE
        pdxH 1333313 .. 1333337 +  -9.2   -4.0162   TTTTCCCCCTCATCA          GCGCTGGCAC AGAAG GCGTCAGCGC          TTTATGCTATAGCCC  78 48
        tyrS 1334710 .. 1334726 + -15.1  -5.24129   GGCAGTAACCTTTCA              GGGCCGG TTT CCGGCCC              TTTTTTATGGCAAGG 100 33
        pdxY 1336080 .. 1336106 +    -5   -3.6869   TAATACATTCCCATC         GCTCAGCTGCAG GGC CGGCACCTGACC         TTTGGGGTTGATCTG  56 486
        pyrG 1339204 .. 1339221 + -11.3  -3.85698   ATCAGAAAATAAAAA             GCCTGTG TGTT CACAGGC              TTTATCAGACAACAC  85 41
        ytfQ 1348382 .. 1348397 + -11.8  -4.22652   TTACTAAGCCGCAGG              CCGCCC TTCG GGGCGG               TTTTCCATGATGTAG  91 34
        ytfR NONE
        ytfT NONE
        yjfF 1351948 .. 1351965 + -14.1  -5.08824   TTCAATAAGCTAAGG             GCGGCGC TGAT GCGCCGC              TTTTTTGAGTAGCAG 100 33
        ydaM 1354185 .. 1354208 +  -8.2  -3.04398   TCAGAGTAAAAAAGC          CAGGCTTTAT CACC GTAAGGCCTG           ATTTTCAGCAGCAGA  63 163
        yhcF 1357963 .. 1357987 + -12.2  -3.08046   TTTTGAGAGCGACAG          CAGGCATCTC CCTAT GAGGTGCCTG          ATTTTGACATGCAAA  81 48
        yhcD NONE
        yhcA 1361296 .. 1361328 +  -6.3  -3.14132   CTGGTTCATCGCCAA      CCGTCCCTCTTTT AGTCTTG AGGAGAGGGAGGG      TTAGTGCAAAACGAG  57 289
        ybjR 1363425 .. 1363483 + -10.5  -2.97177   GTGGCGCGTTTCGCC TGTACTCGGCT-TTGCCTTCAATACGTCA ATC TGACGGGTTGAGGGCAGGAGCC-AGCGCA ATTGTTCGTTTTCAC  72 262
       fcy21 1365133 .. 1365168 + -15.5  -2.62933   GCCCGGCCGAATAAC    CGCGAGACGATCGCC AACCGC GGCGATTGTCTCGCA     TCATGTCCAACATTC  95 27
    PAJ_1142 1367394 .. 1367422 + -13.1  -2.81218   CGGCATGTTTTGCAC        CGAAGCCAGGCCT GCC AGGCCTTGCTGCG        CTTTCGCGTATTTCC  81 284
        yjeP 1368839 .. 1368883 + -12.3  -2.57344   CGCACAGAATACAGA TGCGCCGGACG-GGGCATAA GCGCTA TTGTGCCTGTGTCTGGCGCA CTTGTGCAGCCAGTC  78 44
    PAJ_1144 NONE
    PAJ_1145 1370528 .. 1370561 +  -6.1  -3.59202   TCGCGTGGGTGACTG     TGACGTCTTCAAGGTT TCG GAACTTG-AGGCGTCA     TTATCTGTGAGCATG  59 167
    PAJ_1146 1371657 .. 1371674 +  -8.4  -3.89704   CCCGCCGGTTGATGT             CTGCGC CGTTGC GCGCAG              TTATTGATTGTCTTA  73 362
    PAJ_1151 1377311 .. 1377325 +  -5.7  -4.46073   CTTCGCGCCTTCCCG               CCTGT GACTA ACAGG               TTTGTTATATTCCAG  72 112
        yaiL 1378179 .. 1378231 +   -15  -3.54741   AATCAGGCGGGATAA CCGC-TGAGCCTTGCTGC-AAAGTGC TGC GCACTTTCGCCGCAGGGCTCGTGCCG TTTGCAGCCATAATC  93 48
        ycdJ 1380321 .. 1380335 +  -4.2   -3.7282   GTCTTTCGCGATGGG               AGCATC AAT GATGCC               TTCTTCATCCGGTAA  57 478
        fabG 1382658 .. 1382674 +    -3  -3.14344   TGAACCACAGGTGCC             CGT-CAG CTGC CTGGACG              TTCCTGCGCACCATC  45 107
    PAJ_1158 1383573 .. 1383583 +  -2.4  -3.85698   GCAATGAGTGATCCA                 GGCC TGT GCCC                 TTTGTACAAAGAACG  52 74
        araF NONE
        araG 1390104 .. 1390127 +  -3.8  -4.27617   ATCTAATACGCCGCC          AGCAGCGCCAC GCC GTGGT-CTGCA          TTTTGGTCGCATCTG  62 70
        araH NONE
        araC 1392079 .. 1392089 +  -5.4  -3.09193   TCCTTGTCCTGACGA                 GACT ATT AGTC                 TTAAATCAGTCTGGT  51 56
        ydgJ 1393185 .. 1393203 +   -16  -4.12603   AATACGCAAAAAAAA             GGCCGCTG AAT CAGCGGCC             TTGTTGTTTACTGCA 100 43
        fumC 1399015 .. 1399033 +  -4.5   -5.1523   CAGAATCGGTGACGG             GCAGGCC AGCTG GGTTTGC             TTTTTCTCTTCTGCG  81 224
        yhhS 1401446 .. 1401468 +    -4  -4.37658   AGCGCGATTCTCGCT           TACGGGCTTG AAG CAAACCCGAG           TTTTATCCGCAAGTT  65 309
        marA 1408369 .. 1408395 +   -10  -5.24129   TAAAAGCAGTTTACC         GCCAGGGCCAGG CAA TCTGGCCCGCGC         TTTTTTATCGCCCGC 100 38
        ydcN 1417923 .. 1417937 +  -5.6   -4.2074   CAACGCCCGCCGTCT               GCGCCA TAC TGACGC               TTTATCTGTTACCGA  66 132
        ywoC 1418571 .. 1418587 +  -4.4  -3.12999   GCATCACGCCCAGTC              CCTGGA AATCG TTCAGG              TTACGTGTGACCTGA  48 70
        yfjR NONE
        yeaM 1423422 .. 1423479 + -18.4  -3.71378   GTGACTGGGTCCGGC G-GGCGCGCGTGGCTGTTGCCTGACGC GTCTG GCGCAGGGCGACAGCCACGCGCGTGGC TTTGGATCTGGGCTA 100 3
    PAJ_1186 1426659 .. 1426679 +  -9.7  -4.86731   CAACCGCTAATCACT            TGCCCGC CGTCTGT GCGGGCA            TTTTGTTTCAACACC 100 248
        pqqB NONE
        pqqC NONE
        pqqD NONE
        pqqE NONE
        pqqF NONE
        yceI 1432774 .. 1432795 + -13.7  -5.75342   TCCGTTACTTTTCCG           GCCCGGCAC CCAG GTGTCGGGC            TTTTTTTTGCAGCAG 100 43
        pfkA NONE
        sgaT NONE
        fbaA 1436806 .. 1436817 +  -3.6  -4.07568   GTGAATAAACCTGAA                GTGC CCTG GCGC                 TTTTCGGGGCAGGAG  58 60
        ulaC NONE
    PAJ_1197 NONE
        yuxK 1438999 .. 1439013 +  -2.8  -4.15222   GTCGCCATCATTCTG               GCCATT GCC AATGCC               TTTATTCACAGCCGT  59 414
        yliI 1440472 .. 1440494 + -12.1  -5.66684   GCAGGTACAAAAAAA           GGATTTGGC ATTAC GCCAAATCC           TTTTTTTATGCGTTC 100 50
         cat 1441926 .. 1441944 +  -5.3  -3.64703   CGCGGCATCATCCAT             TACCTTG TTGAT CAGGGTA             TTTGCCTGGCCCACG  56 247
        xylA NONE
        rbsB NONE
        rbsA NONE
        rbsC NONE
        rpiR NONE
        rbsK 1449875 .. 1449895 + -14.1  -4.07568   GGCCTGATAAAAAAA            TGCAACGTC AGT GACGTTGCA            TTTTGCCAGCCAGAG 100 34
         tar 1454229 .. 1454246 + -14.1  -4.11216   TTCATTCATTCGGCT             GGCCCGG TGTT CCGGGCC              TTTTGGCCATCGCAA 100 54
    PAJ_1215 1459317 .. 1459341 +  -2.8  -3.34239   ACAACAACCATACCG          GCATAGCGTT CATAA AAAGCAATGC          TCTTATCTAAGTCTC  46 515
        ydfG 1461453 .. 1461467 +  -2.1  -3.17146   ACGCTGTGGATGCTG               GGTGT TAAGC ACATC               TCTGTTATCAACAGG  43 123
        yjiH NONE
        yjiG NONE
        amhX 1465443 .. 1465458 +  -3.2  -5.22794   AGGGTAAAAACGGGA              CAAAGC GTCG GCTATG               TTTTTTGCTGCTTGT  79 387
        ycgZ 1468447 .. 1468465 +    -6  -2.87132   GGTTACATCGAAAAG             TGATACCC CCT GGTTATCA             TGTCTCAAAACCGGA  52 213
        yycE NONE
    PAJ_1233 1473587 .. 1473615 +  -9.5  -2.67696   CCAGCAGGCTAACCG        TTAAGGCCGCAAC CTG GTTGCGGCCAGAG        TCAGTTATTCGTCCT  66 22
        phoA 1477569 .. 1477600 + -17.4  -2.53517   ACCGCATCAGGTACT      CGGTGCCGGTGA ATATTCGC TCACCGGCACCG       CTGTGTTATCTCCGT 100 83
    PAJ_1236 1478718 .. 1478741 +  -5.1  -3.11291   AGTGAAGATTGAAAA          AAGGCGGCC ATGACG GGCCGCCAA           TATTCGCATTATCAC  52 29
        malK NONE
        lamB 1485331 .. 1485341 +  -8.2   -3.1085   CGCACTGTGTTTCAG                 GCCG CGG CGGC                 TATTGCCTGCGTTGC  64 74
        malM 1486337 .. 1486354 + -12.7  -5.26316   TGATTTGTTCCATCT             GGTGCGC TGAG GCGCACC              TTTTTTATGAGGTCA 100 56
    PAJ_1243 1487714 .. 1487733 + -10.7  -4.52589   TTTTTAGCTGTGGCT            GGCGCAG CATGTC CTGCGCC             TTTTCTATACGAAAC  93 140
        malT 1496253 .. 1496269 + -13.7  -3.03635   CTGAGAAAGGCAACA              GGCAGCG ACG CGCTGCC              TGTTCGCGCGGTTTA  86 37
        ydeP 1502344 .. 1502361 +  -4.1  -3.06831   TGGCTTCTGCAGTAA             GATAGTC TTCT GGCTGTC              TTAACTGCGCGTTAA  47 178
        yhiD 1503425 .. 1503438 +  -5.9  -3.28416   AATAAAGAGTTAACA               CCCTC GGGG GGGGG                TTAATCTCGCTAATG  57 236
    PAJ_1252 1504636 .. 1504647 +  -2.2  -2.84689   TGGTTTTACTCCTGT                CACT TCCT GGTG                 CTTATATATATTTTG  40 206
        insK 1506741 .. 1506759 +  -3.8   -4.0162   GAGACTGGAATGATC             ATGCGTGA CTA TTACGCAC             TTTGTAGTCTGGCCA  60 211
    PAJ_1255 1509996 .. 1510014 +  -4.6  -3.02144   ATAGTTCTTATTCTT             TCGGATTG TAT CAATTTGA             TGTTAGAAACAATGA  49 202
    PAJ_1256 NONE
    PAJ_1257 1517390 .. 1517419 + -11.5   -4.1347   GAATTAACGTTTAGC       TGCAGGCTTTTAC TCAG GTAGAAGCCTGCC        TTTATATGATTACAA  91 34
    PAJ_1258 NONE
    PAJ_1259 NONE
    PAJ_1260 NONE
        nlpC 1523406 .. 1523426 +  -4.8  -3.90843   CGGCAGTTTGCCATG           CG-GATGAT TATT ATCATCGCG            TTGTTATGATTGCTT  59 131
    PAJ_1270 1534874 .. 1534901 +  -2.6  -3.49419   AATCGCGTGACTGAT        GAACATGCGG CCAGCCTA CCGCAGGATC         GTTTTTCTACGAGCC  49 113
    PAJ_1271 1537038 .. 1537061 +   -16  -5.75538   ACGGCCTGACCTCTG          CCGTCGCGGG CGCG CCTGCGACGG           TTTTTATTTTTTACG 100 32
        yeaT 1542971 .. 1542984 +  -4.5   -2.8294   GTGTGACAGAGGACA               GGGAC GGAC GTCTC                TCATTCTGGCCGCTG  47 494
    PAJ_1277 NONE
    PAJ_1278 NONE
    PAJ_1279 1545151 .. 1545176 +  -3.9  -3.09516   CAGGCGCGGCATCGG         TCAGCACGAACG TGG CGA-CGAGCTGA         TTCAGTGCTGAGGCC  46 213
         kup 1549438 .. 1549464 +   -18  -5.18371   TGATAAGGGCATTTG         CGGCAGAGCGCG TCA CGGGCTCTGCCG         TTTTCTTTTGTCAGG 100 38
         bls 1552224 .. 1552234 +  -8.2  -2.74523   TGACGAAAGCGTTAA                 GCGC AGC GCGC                 TGATCTTCACGCTGC  61 12
        eanI 1557222 .. 1557241 +    -7  -2.80443   CGTCGCCGTAACTAC            CTGGCCGC TGAC GCTGCCGG             TCTGATAAGATCTAA  57 1
        yhxD 1559490 .. 1559508 + -14.6  -5.49729   GTTTTTAATACGCCA             TGGCCGCA CTG TGCGGCCA             TTTTTTTGCCTGCTT 100 43
        aba2 1563812 .. 1563828 + -13.7  -3.85389   TGGGATAGTCAAAAA              GGGCGGT ATC ACCGCCC              TTTCGCTTATTCGGC  95 33
        ydfG 1572948 .. 1572966 + -11.7  -4.24002   AACCCTGACCGATAA             GCCAGCC GCAAA GGCTGGC             TTTTACGCTTTGCCC  91 33
        ynfB 1573728 .. 1573740 +  -4.7  -3.07236   TGCTTAGACCGCCGC                ACGGG CCG CCCGG                TATTGCCGTAAATTT  49 2
        ynfD 1574098 .. 1574121 + -14.6  -3.76174   CTACACAATAATGTT          CAGGGCGACG ATGA TGTCGCCCTG           TCTTTTCCTGCCTTT  95 30
        yehW 1576880 .. 1576890 +  -2.4   -2.7094   AGCAACATATTCTTT                 CGGC CAT GACG                 GTTATGTGGCTGCAA  39 169
       opuCC 1577669 .. 1577683 +  -4.2  -2.62936   AACATGCTGTAAGGA               GGCATC GTG GATACC               CTTCATTACATCATT  44 29
       opuCB NONE
       opuBA 1579465 .. 1579489 +  -8.5  -2.53343   AATCCATAATGAATC          AGGGCCGCA CGTTGGT TGCGGCCCA          CTTAATCCTGCCTCT  60 32
        ynfM 1584428 .. 1584446 +  -8.8  -3.28712   CGTTTGACGTCAGTA             TGGCGGTT GCT GGCCGCCA             TTCTCAGCCCAGCCC  66 476
        cybB 1585191 .. 1585216 + -12.5  -2.78018   AATTTCATCTTAATC         TGCGCCTGGTG GTTC CACCCGGCGCG          TAATTCCTCCACAAT  80 68
        sotB 1586499 .. 1586534 + -12.6  -4.24342   CGTTCCAACGGGTGA    CAACAGCAGGCTTCGT GATG ACGGAGCCTGCTCTGG     TTTATTCCTCACAGA 100 26
        pepT 1590808 .. 1590818 +  -8.2  -3.60627   CAATCGCCGTTATCC                 GCCG ACG CGGC                 TTTAGGCTGGAATGA  66 110
        ydcI 1598780 .. 1598796 +  -2.9  -4.24204   ACTATTCGTAAATTT              CACAGTT AGC GACTGCG              TTTTGCATGTCGCTC  59 17
         fnr 1600412 .. 1600457 +    -7  -4.86939   ATCAGGCAGCCTGAT GGTTAAGCCGGGTTAATAAA TGTTAT TTTATTGATCCGGCTACATC TTTTTCACTTTCTTA  85 27
        uspE 1601501 .. 1601527 +   -21  -4.15788   AGGCGAAGCTCGCAA         CAAGGGCGACAC ATT GTGTCGCCCTTG         TTTATTACAGCGCTT 100 43
        ydgH 1605951 .. 1605972 + -17.3  -3.77303   TCAAATAAAATACCG           CAGGGCGGC GCCC GCCGCCCTG            TTGTCTGTTTGCATA 100 33
        ydgI 1607568 .. 1607581 +  -8.1  -2.92463   CCAGTACGACACACA               GCAGG TCAT CCTGC                TGTGTCAGTGCTACA  60 51
        rstA NONE
        rstB NONE
    PAJ_1330 1611661 .. 1611678 + -14.1  -3.75153   ACAGTTAAGGTAGCA             GGCGGCC TGAA GGCCGCC              TTTCACTTCCCCCCG  95 33
         asr 1612360 .. 1612378 + -12.4  -4.49958   CGTTAATAATTAAAA             CACCCGGT TCT GCCGGGTG             TTTCTTTACTGGAGT 100 67
        ydgD 1613445 .. 1613468 + -11.7  -5.75342   TGAACACATAAAAAA          GCCCGCATC CATCAA GGTGCGGGC           TTTTTTTTACGCGAG 100 64
        acpD 1618264 .. 1618279 + -11.8  -5.64274   TGTTTGACGCGAGAA              CCGGGC ATCA GCCCGG               TTTTTTTATGCCTGC 100 47
        ldhA 1622593 .. 1622614 +  -3.5  -3.30124   TCAGAATCGGATTAC           CGCCTGACG TATC CGGCCGGTG            TTATCCGGCCTGAAC  48 19
        yhiD 1623883 .. 1623894 +  -5.8   -4.1021   TGCAGGCAGAATAGC                CAGG TCTT CCTG                 TTTATCGTTATCGCC  66 161
        ydaO 1625149 .. 1625172 + -15.3  -5.66684   TTCGTTGAAAGTAAA          GGGCACGCG TCAACT CGCGTGCCC           TTTTTTTATACGTTG 100 51
        ycjI 1629516 .. 1629527 +  -7.2  -3.03124   GCCGCGTCTTCACCT                GCCG GTAA CGGC                 TGTTCCAGCATGGCC  56 340
         tpx 1630794 .. 1630824 + -14.1  -4.81852   CGCTGAAATAATGGC       CACAGCGGATAAG CCAGA CTTATCCGCTGCG       TTTTATTCGTTGTCG 100 30
        pspF 1638264 .. 1638274 +  -8.2  -4.46212   GATCCGGTGTGACTC                 GCGG AAA CCGC                 TTTTATGATAAAAAC  80 443
        sapA NONE
        sapB NONE
        sapC NONE
        sapD NONE
        sapF 1644087 .. 1644097 +  -2.4  -4.39386   GGCATATTGTGGAAA                 ACGC TGA GCGG                 TTTTCCTGATTTCAA  61 47
        fabI 1645048 .. 1645064 +  -2.2  -3.29325   CCCTGCCCGATCCCC              GCGTTA TTCCT TATCGC              TATTAATTATCACCG  45 78
        yciW 1646356 .. 1646400 +  -2.1  -4.62069   GCTGTGCGAGCGGCG TGGCCCGGCCAGGCTCGGCGAT CACC AGCGC-G-GCCTGAC-GCGCCA TTTTTGGCATCGAAA  65 75
        ydeP 1652030 .. 1652044 +  -8.5  -4.74103   TTCTCCAGGCAAAAA               GCCGG TTCGT CCGGC               TTTTTGCCTTGCCGC  88 50
         rnb 1654057 .. 1654090 +  -8.8  -5.14965   TGCCGCCTAAGACAC     CACCGTCGGGACAG CACAGC CTGCTCCGACGGTC      TTTTTTCCTCCGCCT  93 31
        cstA NONE
        ybdD 1656604 .. 1656619 + -11.8  -5.25803   TGAACAGAAAGTGTG              CCCCGC TTCG GCGGGG               TTTTTTCTGCCCGTT 100 38
        yciR 1658743 .. 1658771 +    -6  -4.42653   GTGTAATTATCTAAC       CCGCTTTA-CGCA GTGA TGCGCTATGGCGG        TTTTGTAACTGGACT  72 35
        osmB 1661188 .. 1661208 + -13.3  -4.56978   CTACATAATAAAAAA            CCGGGCTAC CTT GTAGTCCGG            TTTCTTCTTTCAACC 100 78
        ribA 1665655 .. 1665676 + -11.5  -3.97368   GAAGTCCTGAATGAA           ACAGCCGGG TTTC CCCGGCTGA            TTTATCAGTTCAGCA  91 31
        yciN 1673987 .. 1674002 + -11.8  -3.99324   TGCAATAACAACAAA              CCCGGC CGAA GCCGGG               TTTGTACTCATAACA  91 33
        yciK NONE
        btuR NONE
        citN 1678459 .. 1678480 + -15.9   -5.5112   CCCTGACAGCAAAAA           GCCGCAACG ATCA CGTTGCGGC            TTTTTTATTAATCCG 100 60
    PAJ_1386 1681360 .. 1681370 +  -6.8  -3.07291   CTGTGTTGAATATCT                 TCCG GAT CGGA                 TTCAGTAAAGTCATT  54 179
        trpE 1684680 .. 1684690 +  -4.6  -3.14344   ATCGCAATACGATGC                 CGGC GTC GCTG                 TTGCTCGACCGACTG  50 131
        trpD NONE
        trpC NONE
        trpB NONE
        trpA 1689580 .. 1689605 + -16.3  -2.92898   CCCGCTAATTCCCCA         CATGCCTTACC GCCC GGTAAGGCATG          ATTTCCCTGTTTTTT 100 33
        osmY 1690050 .. 1690069 + -10.7  -5.60993   CGGTTAAAAAATGTA            GGGCCAC ATTGAC GTGGCCC             TTTTTTTATCAGAAA 100 44
        ykgJ 1691370 .. 1691387 +  -5.5  -3.90744   GAACATGTACAATCG             CCGTGTT AATT AACCCGG              TTCTTTCAAGGAGAG  61 17
        yciC 1692130 .. 1692181 +  -4.2  -3.06915   ACCGGCTTTATATGC TGTTACGTTGATTGTCCGTGCGCC TTCC GGCGCACTGGCAGGCCATGCAGCC TTAACTGGAATGACT  47 15
        ispZ 1692740 .. 1692763 +   -11  -2.99947   GAACAAAAATAAACC          TGTTGTCCGC TCAG GCGGGCAACG           TCTCTCTCAGACTTA  74 29
        yciA 1693210 .. 1693221 +  -5.8  -4.21462   ACCAGTCCTACCCTG                CCTG ATAA CAGG                 TTTTCGGTGCTGAAT  69 21
        yciI 1694606 .. 1694629 +  -8.8  -6.07627   CGCAGCCAAAAAAGA          GCTTCCGGGC AGCC GCTCAGAAGC           TTTTTTTTTCGAGAT 100 49
         cls NONE
        yciU 1697041 .. 1697058 + -14.1  -5.45802   CACCATGAATATAAA             GCCGGGC GATT GCCCGGC              TTTTTGTTTTACAGC 100 46
        adhE 1708973 .. 1709019 + -10.9   -3.6761   ATCGCATCGCCTTGC GCCCTTAACGAGCGCCATGG AAAAGCAG CCC-GGCGCTCATTGAGGGC TATTTATTCCCCCAC  81 208
         hns 1710538 .. 1710553 +    -9  -6.34616   GCACCAGAAAAAAAA              GGAAGC GATC GCTTCC               TTTTTTTTATTTTCA 100 93
        ychJ 1716629 .. 1716662 +  -3.1  -3.32769   TACAAAAAATGTTGC     GGCTAAGGCAGTTGC CTGC GTAACGGTTTTACCC      TTAATGCTTTGACAG  47 20
        purU 1717572 .. 1717621 +  -4.3  -3.62096   TTGGCTGACATTCCA GCG-CTACGGGCAAAAAGTGGG CAAACGA TTCACCTTTTGCCAGTCGTCGC TTTACAGTCATGGCG  55 58
        xthA 1719309 .. 1719333 + -14.3   -3.0054   TTCTGACAGGATCCT          GACGCGTGGTG AAA TGCCACGCGTC          CTTATTTCACTATTT  90 35
        sppA 1724390 .. 1724414 + -15.7  -4.19704   AGTGCGATAAACCTC          TCAGCCCGACC GCT GGTCGGGCTGC          TTTTCCCTGCCATTG 100 31
        ansA NONE
        pncA 1726152 .. 1726181 +  -9.3  -2.59921   CGTCATCCACGCTAA       ACGCTTCTGTCAG CACC CTGACAGAAGCAC        CTTATCAGACTTAAT  63 69
        gapA 1728249 .. 1728266 + -11.3  -5.54894   GACACTAGAGAATAA             GGGTGAC TTCG GTCACCC              TTTTTTTGATCCCTT 100 49
        yeaD 1729662 .. 1729674 +  -2.6  -3.01712   TTGAAGCCTTTGCAT                GGCG CGAAT CGTC                TCTTCCAACGGGACG  41 511
        yeaG 1733230 .. 1733249 + -10.7  -3.08813   GAGTCTGTAAGCAAA            CCGGTGC GGGATA GCACCGG             TCTCTTAAGGTCGGG  74 44
        yeaH 1734587 .. 1734603 + -10.1  -5.82316   AGCCTGACACATCAA              GCCGACG CTC TGTCGGC              TTTTTTTTGCGTAAT 100 34
        cvrA NONE
        yebV 1737150 .. 1737161 +  -7.2  -4.23892   ACAAACTGAAAACAT                CCCG GTTT CGGG                 TTTTCAGTCGTTAAC  73 314
        amsG 1738712 .. 1738740 + -10.4  -3.88559   CCTACTGATTTAGCA       T-GCGATGCCTGT TTCA GCAGGCATCGCCA        TTTCTCCCGGTAATT  82 33
        cmlA 1740340 .. 1740364 +  -6.3  -2.65264   TAGCCGACGCCATCA          CCGGCCTGCAG CTG CTGTACGCCGA          TAATCTCGCTGCTCA  48 346
        ycgB 1744457 .. 1744473 + -10.1   -5.4756   GCGGAATAAAAAAAA              CCGGACG CCA TGTCCGG              TTTTTTATTAACGTT 100 41
        dsbB 1746121 .. 1746137 + -13.7  -3.91196   CGCTAACGTTAAAAA              GGCTGCC ACT GGCAGCC              TTTAATGTATGTGCA  95 35
        minC NONE
        minD NONE
        minE 1749884 .. 1749912 + -10.4  -4.23213   CGACCGTTTCCTGAT        TTTCCCCTGC GCTGTACTG GCAGGGGAAA        TTTCTTACATCTCGG  85 44
        yoaB 1757391 .. 1757402 +  -4.4   -4.4767   CAGTCTAACGGCATT                TCTG ATGT CAGA                 TTTTGTGCTCAATGA  65 313
        pabB NONE
        yeaB 1759336 .. 1759346 +  -3.2  -4.32046   GCAAATTGCGTTTTA                 GTTG ACG CAGC                 TTTCATTTTTAACCC  63 25
        sdaA 1760974 .. 1760989 + -10.4  -3.33657   ATTAACAATGTTAAA              GCGACC TTCG GGTCGC               TCTCCTTTTTTTATG  75 112
        yoaD 1762706 .. 1762724 + -13.2  -4.67608   TCCGCGCAAAAAAAA             CGCATCAC TCC GTGATGCG             TTTTATCTTCAGGTG 100 68
        manX 1765777 .. 1765799 +  -2.5  -3.06564   GGATCTGGTGGCAAA           GGTGAGCGC ATAAC GCGCCAGCC           GTCTTTTTCTATCCT  42 13
        manY NONE
        manZ 1767505 .. 1767528 + -16.8  -4.22338   CTCTAACCGGCATCA          CATCGGGAGC TGCG GCTCCCGATG           TTTTCAGATTGTGGT 100 35
        yobD 1768076 .. 1768095 +  -4.3  -3.60805   GATCATAAAGTCTGC            GT-CGCAG GGAAA CTGCGTAC            TTTCCGCTAAGCTCT  54 58
        cspC NONE
        yebQ 1774024 .. 1774041 + -12.7  -4.73388   TTCAGCGATAAAAAA             GGCGACG TTGC CGTCGCC              TTTTTCGTGAGGGTT 100 42
        yebS NONE
        yebT 1782621 .. 1782640 +   -15  -5.09259   CAACCTTAAGCCATA            CGGGCAGC CCAG GCTGCCCG             TTTTCTTTTGGCGTG 100 32
        yebU 1784233 .. 1784250 + -14.1  -3.46602   ATGAGAACGGAAGAA             CGCCGGC AGAA GCCGGCG              TTGTGATGTCACGAC  93 139
        betI NONE
        betB NONE
        betA 1792177 .. 1792194 + -12.7  -6.06723   TTCTACGACATCAAA             GCCGGAC TGCT GTCCGGC              TTTTTTTTTGCCGAA 100 45
        mdtJ 1792885 .. 1792903 +  -4.5  -2.67708   CGGTGAGGTGAAGGA             GGCAGAA CATGA TCCTGCC             TGATGTGATCCATTT  46 4
        mdtI 1793229 .. 1793246 + -12.7  -4.96106   CTGGCCTGATAACAG             GGGGACG CTGA CGTCCCC              TTTTTCATCTTTATC 100 32
        trpI 1794688 .. 1794707 +  -7.8  -3.19175   GTCGCTCGCGTTGTC            GCCTCGCGC CTG GC-CGGGGC            TTAGCTGTATTGCAC  62 43
        bcsY 1796780 .. 1796799 + -13.6  -5.63103   ACGCTGATGAAAAGA            TGGCTCGC ACTG GCGAGCCA             TTTTTTTACTTCACA 100 34
         tar 1799369 .. 1799380 +  -7.2  -3.09452   GGCACTGAGTCGTGA                CGGC AGTT GCCG                 TATCTCTTCCGCACT  57 295
        yidP 1803919 .. 1803935 +  -7.9  -2.64561   AGTGAATCTGGCTCA              CACCCTG CAG CAGGGCG              CTATATTTATTGGGG  58 135
         tcp 1805857 .. 1805902 + -12.7  -3.05384   AAACGCCCTTTCGCA CAGGA-GGGAGAAACGCGATCG CGC CGGTTTCGTTTCTGCCATCCTG TTGCGTGAGCCGGGC  83 39
        holE NONE
        exoX 1808939 .. 1808950 +  -5.8  -2.57132   GAGCTCCAGGGCAAC                GCCT TCAT AGGC                 CTTGTAGCGCCCAGA  48 87
        purT 1813046 .. 1813078 +  -6.1  -3.75153   CGTTCAGGGATAGTA      CCATTGCGGTGAGTC AGT GACTCACCGCTCGCG      TTTGACTTCCCGCCG  61 28
        hexR 1816780 .. 1816795 +  -3.2  -3.29511   TATCTAACAAAATCG              CCCTTT CTCG ACAGGG               TTATGGCGCAGTGCC  48 173
        pykA 1818408 .. 1818428 + -16.9  -5.61881   TATTACCATTGGAAA            CGCGACTGC CCT GCAGTCGCG            TTTTTGTTTTTCCAC 100 64
         cmr 1819693 .. 1819713 + -16.9  -3.03829   GCCTCTCTGAAGCTT            TCAGGCCGC AAT GCGGCCTGA            TGATTATTTACGTGG 100 31
        znuC NONE
        znuB 1824705 .. 1824719 +  -2.1   -4.0274   ATGGTGCGCAAACCG              GCGCTG TGAT CAG-GC               TTCTTTGGTGATACC  55 17
    PAJ_1518 1828003 .. 1828013 +  -6.8  -3.16055   AGATAAATTCTTCAA                 TCGC CTG GCGA                 TTACTCCAGGATTTC  57 135
        yecE NONE
        yecN 1831742 .. 1831758 +  -2.1  -4.27259   CAGAATAGCGCCCTT              TCCGCCG TCT CTTCGGA              TTTTCGATATGTCTG  57 80
        yecO NONE
        yecP 1833765 .. 1833785 +  -7.5  -2.52795   CAGGCAAGATGACGT            TGCTGAGCC GCG GCCTCGGCA            TGCATTGACACGCTT  53 330
        gldA 1835535 .. 1835545 +  -2.4  -3.43492   CATTCAGGCGCCGTT                 CCCG CCA CTGG                 TTATCATAGGTGTAG  46 232
        patB 1838579 .. 1838591 +  -3.3  -3.91897   AGCAACGCCATTGCC                CGCAT CCC AAGCG                TTTCTGGCTCGCCCC  56 203
        argS 1841327 .. 1841356 +  -5.7  -2.55392   CATGTAACCTCTTCA      GGCGCTGAGTGCC CACCGT GGC-C-CGGCGCC       TGCCTTCCCTGCCTT  50 34
        aqpZ 1842345 .. 1842390 + -36.5  -3.04263   AATGGCTTCATTATG CAGACCGGCAGCGATCGTGCA CGCC TGCACGATCGCTGCCGGTCTG TCTTAACAATGGAAT 100 52
        basR NONE
        pmrB 1864823 .. 1864835 +  -3.3  -3.52192   CTAAAGCCTGGCAAC                GGCCT GAA ATGCC                TTGTGTGACGTTGAA  50 307
        msrA 1865751 .. 1865770 +  -7.9  -6.38039   CACATTCAAAGAAGA            GTCCAGA CTAACC TCTGGAC             TTTTTTTTTTGCATA 100 333
       ssuD1 NONE
    PAJ_1556 NONE
        soxA 1874584 .. 1874611 +   -12  -3.83323   CTTGCCCGCTAATTT        TACCGGATGCGT CACA GCGCACCCGGTA         TTTCCCTTATCTACA  91 102
        ygcS NONE
        soxC 1877420 .. 1877435 + -11.8  -4.28548   AACGGAGATAAAAAA              CCCGGC CGAA GCCGGG               TTTTGGTCGCTACAT  91 49
        putA 1888211 .. 1888232 + -13.1  -5.78622   ATCGCTTACGTTAAA           GGTTCATGC CCGG GCATGAACC            TTTTTTTTGCGCTGA 100 55
        narV 1888504 .. 1888525 + -12.3  -2.63361   AAGCCTGACCGCAAT           CCGGCCCGCT ATC AGCGG-CCGG           CTTCATTGCGCTTTT  78 39
        yffH 1891364 .. 1891384 +  -8.9  -2.96695   CAGGAACAGGCTAAC            GGGGGAGAG ATG CTCACTCCC            TGCTTTGCTCGCCAG  66 129
        rmlA NONE
        rfbC NONE
        rfbD NONE
    PAJ_1581 1902319 .. 1902335 +    -8  -4.91109   GTTAATAATATAAAA              GGTGCT TTATT AGCACC              TTTTTATCATACAAC  86 195
        fliD NONE
        fliS NONE
        fliT NONE
        amyA 1929810 .. 1929845 + -12.6  -4.27443   ATTCACCCGTGTGAC    TATGCTGAGTGCGGTC TCTG GACCGCATTCAGCCAA     TTATTTTGCTAATGC 100 72
        msgA 1931982 .. 1931992 +  -5.4  -4.74084   AGATGCCACGTCACG                 CAGA TAA TCTG                 TTTTGCTTTTGGTTT  75 289
        fliF NONE
        fliG NONE
        fliH NONE
        fliI NONE
        fliJ NONE
        fliK 1941054 .. 1941077 +  -6.6  -2.71011   ACGCGATAATCTGTT          CAGGCAAGCC GAGA GGCTTGCCCA           TAATTCACAGGAAGT  53 106
        fliL NONE
        fliM NONE
        fliN NONE
        fliO NONE
        fliP NONE
        fliQ NONE
        fliR 1945361 .. 1945371 +  -8.2  -3.73042   TTATTCTTATTAAAC                 CGCG CTT CGCG                 TATTTTAGTCAGGCG  71 169
        rcsA 1946500 .. 1946516 +  -7.2  -5.66684   CCTCCCCTCTAAGAA              CTGGCC CAAAA GGCCGG              TTTTTTTATGGATTA 100 44
         trg 1948394 .. 1948425 + -16.7  -4.49981   CGCTGTCAATAACAC      TCGCCCTCTGAGCC GAACA GGC-CAGAGGGCGA      TTTTGTGATGGTCTG 100 92
        yedP 1950541 .. 1950556 +  -6.1   -3.7732   GACCATTTTTTGACT              CAGCC ATGAAA GGCTG               TTGTTCCTCTCGCAA  61 17
    PAJ_1624 1952108 .. 1952118 +    -4  -3.90318   GAAATGACTGTCATT                 GAAA CCA TTTC                 TTTATAGCATGGTAA  58 323
     ecoRIIM 1955905 .. 1955922 +  -9.1  -3.28791   ACAATTCCTCTCTTT             TCCTGCC GTCC GGCGGGA              TTGTCACAACGCCGT  69 69
         tsr 1957614 .. 1957634 +  -6.8  -4.42667   TTGGGATGTAAAAAA            GCCGCC AGTGTTAAA GGCGGC            TTTTGATCGTTTTGC  74 50
    PAJ_1631 1960077 .. 1960103 + -10.3  -4.40237   CCTGAAGCCCGACAA        TGCCAGCAT-GA CGTT TCGATGCTGGCA         TTTTCCTGTCTGGTC  90 113
        yeeI 1961128 .. 1961149 + -10.9  -5.50313   GCCAGATTTAAGAAG           CCTGCTTAG GAAA CTGAGCAGG            TTTTTTGCTTTTCTG 100 225
        ybdA 1965836 .. 1965860 +  -7.1  -3.95073   TGACTGGCAAAGCCT          GGCTGCAACAT TGA ATGCTGCAGGC          TTTATCGCTATAGCC  69 81
         amn 2031702 .. 2031740 + -14.1  -2.84098   ATAATGAATGAAAAA   GACGGTATTAATGCGAA AACCC TTCCCGTTAATACCGTC   TCGTTAATTAAGACG  88 44
        ompR 2035629 .. 2035644 +  -8.2  -2.87132   GACTTCCTGCCCCCA              TGCGCC TTCG GGCGCG               TGTATCACCACGCGC  62 268
        virA 2044466 .. 2044478 +  -3.3  -3.87641   ACGACTGGGTGAAGA                TGCCG AAA CGGTG                TTTCTGCAGGCTGTT  56 254
    PAJ_1697 2052979 .. 2052992 +  -6.7  -3.63627   GCGCGATCCACCAGC               GCCAT GGAC ATGGC                TTTACGCTCTGCCCG  63 301
    PAJ_1704 2060261 .. 2060275 + -11.4   -4.2558   TGCTAATCAGTGAGC               GCAGCG GCA CGCTGC               TTTTCATGACGGGTG  89 139
         tcp 2086900 .. 2086924 + -15.1  -3.05816   TACAATGGCATTACA          CAGCGAATCTC GAT GAGGTTCGCTG          TTCACTGACGCCTCA 100 247
        yahN 2091783 .. 2091796 +  -2.4  -3.25015   GTGGATAACGGGGCT               TCAG AACAGG CTGA                TTCATCCTGCTTAAA  43 83
        ycdC 2092686 .. 2092706 +  -2.4  -3.14132   ATGATGCAGTCTGGA            ACTGGGCG CAAAA CGCGCAGA            TTGGTACGCAGCAGC  43 169
        alo1 NONE
    PAJ_1731 2095132 .. 2095145 +  -3.7  -4.08767   GTCCGGATGCGCAGG               CCCGG TCAG CAGGG                TTTTAAAGCCCTGCC  60 315
        rhaS NONE
        rhaR 2103770 .. 2103795 +    -9  -4.60797   ACTGATAACGCAAAA         GCCTGATACG CGTTAA CGCATCAGGC          TTTTATCTCTGCGGA  90 20
        aldA 2107191 .. 2107209 +  -7.4  -3.84463   TGGCAACTGAATTCA             CGCGGT GAAGGAA ACCGCG             TTATCTGTTTGTTCT  69 106
        apbA 2112439 .. 2112476 +  -2.5  -2.93623   AGCCGCGTCGTCGCA   GGACGCGCGAGTAACGG AATT TTGTTACACTCGCTGCC    TCATCTTTTGGAGGA  42 62
        lacI 2113585 .. 2113616 +   -10  -2.57132   CTCAGCCATAAAAAA      AAGCCCGCCCAACC TGAA GGTTGCGCGGGCCG       GTTATCAGCAGCGAA  66 57
        sbcB 2118568 .. 2118583 +  -3.2  -3.53012   GGTGCAGCGTTTCCA              GCGC CAGCGCCA GCGC               TTTACCGACGCCGGA  48 408
        ygbI 2124544 .. 2124563 +  -2.8  -3.45005   TCGGTAGAACCAGAT            ACTGGAAG TGAT CTTTCAGG             GTTTTGTTACGTTTT  48 246
        puuD NONE
        puuR NONE
        puuB 2130808 .. 2130836 +  -9.5   -5.2696   ATCCACCAGCGTTTT        GCCCGCTGTAGTT TCC GGCTGCAGCAGGC        TTTTTTCCGTTTTGA 100 479
        hisG NONE
        hisD NONE
        hisC NONE
        hisB NONE
        hisH NONE
        hisA NONE
        hisF 2138064 .. 2138076 +  -3.3  -2.64099   CTGGGAAAAGACCCA                AGGCA TGA TGCCG                GTTATCGTCCAGCAC  42 66
        hisI 2138639 .. 2138679 + -12.9  -3.79113   AATAACGGTGCAATA TACTGCTCAGAATTC-CA CTTTTA TGCGGATTCTGAGCAGTA  TTCTTCTCAAAAAAT  93 36
    PAJ_1773 NONE
        ycjC NONE
        yeaK NONE
        argT 2141740 .. 2141757 +  -3.3  -2.81312   GTGGGCTTTTTCGCT             CTCCTGC CTGT GCAGGGC              TATACTCAATGACTT  43 48
    PAJ_1777 2143126 .. 2143143 + -11.3  -3.35327   GGTGGGGTAAAAAAA             GGCTTCC CGAG GGAAGCC              TTATAGCGCTTTGAT  78 31
    PAJ_1779 2146348 .. 2146361 +  -3.1  -4.31895   TAGATGATAAGGCTG               TTCGC CCGA GTGAA                TTTATTAATATGTCT  62 329
        bcbG NONE
        bcbE NONE
    PAJ_1782 NONE
        kpsT NONE
    PAJ_1784 2151449 .. 2151460 +  -4.4   -3.6692   TGCAAGGCTAACCAT                TGCT CAAC AGCA                 TATTTTGACCTAAAA  54 413
    PAJ_1786 2153621 .. 2153636 + -10.4  -5.18561   AAAACCTAAAAAAAA              CCCGCA AGTA TGCGGG               TTTTTTGGGTATTTA 100 243
        yegH 2174400 .. 2174419 +  -3.5  -3.34233   GATCAAGCCACTGAT            TCAGGCG CGATTT CGCCTCA             TTCTGCAGCTTCTCG  48 90
    PAJ_1805 2178379 .. 2178400 + -12.3  -3.17194   GAATAATGCACATGG           TGGCTCGTG CTTC CGCGAGCCA            TTCAATTCAACGAAT  82 35
        yegE 2181553 .. 2181573 +  -7.5  -2.71924   AACTGCGCCAGGCGG            GCTGCCGCA TCG TGTTGCAGC            ATTTCGGCCGCAATC  56 169
        yegD 2183476 .. 2183489 +  -2.3  -3.46602   ATTTCCTGACAACAG               CGGCT CATC ACCCG                TTATCCTGTGGCAAA  47 200
        mdtA NONE
        mdtB 2188139 .. 2188175 +    -8  -4.15833   CGGGGATACTGGGGT   TCCGCCTGCTGCCGGTCG CGC CG-CTGCC-GCAGGTGGA   TTTTCCGGTCATAAT  75 107
        mdtC NONE
        yegB NONE
        baeS NONE
        baeR 2194645 .. 2194658 +  -3.9  -4.10085   GTCATTTGATTTAGA               TTGAT TCAG ATCAA                TTTACTTCCTTTTTC  60 27
        yegQ 2196255 .. 2196277 + -11.9  -5.49579   GATCCACCTCATTCA           CCCGCCCGG CTCCC CCGTGCGGG           TTTTCTTTTTTCTCC 100 144
        yegS 2197274 .. 2197295 + -10.1   -3.1247   TGCTGAGCTAAGTTA           ACCGGGAGT GAAG ACTCCCGGC            TTAGATGTAAACAGT  73 30
        ydfI NONE
        ydfH 2199880 .. 2199904 +  -9.9  -3.73775   AAGCGCTGACGCCCT          GCCCGGGTTAG CAG CCAGTCCGGGC          TTTCATCACCATCGA  76 283
    PAJ_1820 NONE
    PAJ_1821 2203133 .. 2203144 +  -7.2  -3.07043   TTCAGGATACGTTGT                GGCG TTAA CGCC                 TGTTCAACTGATCAG  59 18
        ywkB 2204706 .. 2204729 +  -6.6  -3.92592   GCCGGATATTAAAAA          GCCCCGCAAC ATAG GTTACAGGGC           TTTCGTCTTACGCGT  66 29
    PAJ_1825 2208121 .. 2208141 + -10.3  -3.53444   GCGTGGTGACCACCA            GCGCGCCGG TGA CCGGTACGC            TTTGCGCCAGCGTAA  72 402
        metG 2211106 .. 2211121 +  -4.7  -3.14344   GCCGGGGATGGCGCT              TCAGC CACACC GCTGA               TTGCTGGCGGGCCTG  50 68
        yohJ NONE
        yohK NONE
         cdd 2213343 .. 2213358 +  -5.4  -3.21416   CCAGAAATTTCATAG              GATCTG GCGC CAGGTC               TTCGTCATCACAATA  52 99
        sfcA 2215140 .. 2215171 + -16.6  -3.27525   CCTCTATCTAAAGAC      ACGGCGCTGGATCC CTGC GGATCCAGCGCTGC       TTAAATTTACACCAG 100 30
        sanA 2216215 .. 2216230 + -11.8  -3.13164   AAGGGCGCAAAAAAA              GCGGCC CTGA GGCCGC               TTACATCATTGCCAC  79 252
        yneJ 2225509 .. 2225531 +  -5.6  -4.00465   ATGCATCCATTGCAG          GCGGCGGAA TAGAGT TTCCGC-GC           TATTTTTAACTTATC  64 14
        adhC NONE
        yeiG 2227592 .. 2227617 + -17.7  -2.72144   TAGGGTGATCTCACA         CAGGGGATTGC CAGT GCAATCCCCTG          ATTTCAAGACAGTCC 100 33
        yeiH 2233703 .. 2233722 + -12.8  -3.29043   CCTCTCCCTTCCTGA            CCGGCCCT TGAC GGGGCCGG             TTATGGCGGCCACTT  87 50
        yfcI 2234924 .. 2234934 +  -8.2  -3.53012   CGCTAAAAATTTCCT                 GCGC ACC GCGC                 TTTGCCACAGCGCCA  69 199
         nfo 2235847 .. 2235876 + -15.1  -3.12327   CAACGTTAAGAAATA       AGACAAAGGAGCC TTGC GGCTCCTTTGTCG        TCTTACCTGTCAGGC 100 32
        yyaJ 2245771 .. 2245799 +  -8.9  -3.83026   GACCGATAGCCATCA        TCTGACGGGTC TTTCTCT GGCTCGTCAGA        TTTGCTCTGCAAAAC  76 71
        yeiP 2248113 .. 2248137 +  -2.1  -2.76418   TACGCCGGGTTGACA          GGTAGTATTAT ATT ATAACACCGCC          CTCTTTCTCTACAGG  40 53
        yeiR NONE
        yeiU 2249897 .. 2249936 +  -9.4  -3.28791   AATAGTAATTAATTA  GCGAGGGCGGAATTATGAT TAA ATTATAAC-CCGCCCTCAC  TTATAAAAAACCCAT  69 39
         rtn 2251010 .. 2251025 + -10.4  -6.15828   CAGAGAAAAACAGAA              CGCTGC CCAG GCAGCG               TTTTTTTTTAATCCC 100 66
         rtn NONE
        yejA 2254744 .. 2254758 +  -2.8  -3.53012   CCGGTCGATCAGGCG               CTGG CGAATAT CCAG               TTTGGCCAGACCAGC  49 151
        yejB NONE
        yejE NONE
        yejF 2258441 .. 2258453 +  -4.8  -4.13945   AGGCAGGGCTGCCCT                TCGC ACTCG GCGA                TTTTGCCGTCAACCT  61 115
        yejH 2262809 .. 2262832 +   -11  -3.09175   CCGCTATAATGCCGC          CCGCTTTTGC ATGT GCATAAGCGG           TGTTGAATAACCCTT  74 73
        rplY 2263197 .. 2263228 + -18.2  -4.30441   CGAATGCGTTGAAAG      TAGAAGGGCCGGTT GCGA AACCGGCCCTTTTA       TTTTGCCTGTTATCC 100 45
        yejL NONE
        yejM 2266602 .. 2266618 +    -8   -5.4833   TTATCCCTTAAAAAA              CCAACC TTTAC GGTTGG              TTTTTTATTGCCTGC  95 193
        fecI NONE
        fecR 2278978 .. 2279001 +  -3.1  -3.01712   CGCGGTGGTTATCTT          GCACCTGGCA CTGAT TGCCATG-GC          TATTACCCACACCAC  43 289
        tonB NONE
        exbB NONE
        exbD 2281229 .. 2281271 + -11.5  -2.59526   GGTTTTTTGCTGGAA CCTATTATCAAATATCCGT CATGA ACGGGAATTTGATAAAAGG TCAATTGCCTTTATC  75 329
        ybdG 2286641 .. 2286670 +  -4.3  -2.82516   ATAAAAAAAGCTTAT       TCTGTTTCCTC CTGAAATC GAGGGTACAGA        TATGATCATCCAAGC  45 277
        ybjJ 2313137 .. 2313154 +  -6.9  -2.75039   GCTGTGGCTGTCAGT             GCGCGCA ACGT TGCGCGA              TAATTCAGGTATCTG  54 5
        yojN NONE
        rcsB 2316489 .. 2316513 + -15.7  -4.21194   TAAAGATTAAGTCCT          CAGGCGGTGCG TTT CGCACCGCCTC          TTTTCCCTGCTACCC 100 31
        ubiG 2323145 .. 2323175 + -10.5  -2.87146   ACGCCTGATAATCCT      GCAGCGTGTGGC TCTGCCCT GCC-CACGCTGC       TGTCATCCTGTTGTC  71 33
        nrdA 2325885 .. 2325910 + -11.9  -3.04398   CTGTAAGATCTGACG         GTCGGGCGGGAG CCA TTCCCGCCC-AC         ATTTTCCCGCGAGGC  78 28
        nrdB NONE
        yfaE 2327380 .. 2327402 +  -9.9  -6.22802   CAGGCAGTTAAAAAA           CCGTCATTC CAACC GAATGGCGG           TTTTTTTTTCTGGCG 100 51
        mdoD 2331338 .. 2331365 +  -8.5  -5.75342   CCGCCTCACGTGAAA        TGCATCTCAGGC CAACC GCC-GGGATGCA        TTTTTTTTGCCCGAC 100 46
        yfbQ NONE
        yfbR 2352600 .. 2352616 + -10.8  -3.11341   CGCCGCTCTGACAAT              GGCGGC TTCAC GCCGCC              CTTTTACCTAGCCTT  76 30
        ackA 2355929 .. 2355952 + -14.6  -4.17048   CGCCTGATCTCCTTT          CGTCGTCAGC TCCG GCTGACGGCG           TTGTTTTGACACCCA 100 34
         pta 2358153 .. 2358173 + -14.1  -5.65177   CTTCCCGTTGAACAA            GAGCATGCA GAC TGCATGCTC            TTTTTTTATGCCTAT 100 44
        puuE 2362409 .. 2362463 +  -6.2  -2.70932   TCCTGGGCAAGTATT AGGTTTCGCGGGCTGACGCGCCGC ACGTTCC GCTGCGGGTCAGCCCCTGGCATCA TGATTGCAAGGCAAA  51 24
      potD-A 2363553 .. 2363581 +  -4.4  -2.72511   TGGGCCGCGAAATAA        CCCGCTGCCGGA CCCGC TCCGGCAGCCCC        CTTTCAGGAGATCGG  44 26
        potH NONE
        potC 2365732 .. 2365758 + -11.6  -3.57918   GTTCCGGTTATTAAA         CCGCCCACAT TGTTAAC GTGTGGGCGG         TTGTCTGATCTGGAT  83 59
    PAJ_1940 2368084 .. 2368099 +  -3.2  -3.73224   TCATCGGTAAACTCA              TCACAG CGGG CGGTGA               TTTCATCCGGGGTCA  53 293
        yfcH 2370379 .. 2370396 + -12.7  -3.53783   AAAAGCTGAGGATCA             GGGGAGC AATT GCTCCCC              TTCGCTTTTTTACTG  89 32
        ydeW 2376043 .. 2376061 +  -3.1  -3.69216   GCGCTGCTGCTGCCC             TCCCG AGAGATGGA CGGGA             TATTTTCCCTGCGCG  50 340
        yyaM 2390222 .. 2390261 +  -2.9  -5.19251   TGCCCGCTCCGGCCT GCATCGCGGC--ATTATCC AGCC GGATAAAAGGCCGCAGTGC  TTTTTGTTGCTCTTC  81 140
        tctC 2393525 .. 2393547 +  -6.2  -3.83502   AAACCCTGGGCTTCC           CGTTAGCGAC CTC GCTGCTGACG           TTTGGTATCGGCCTG  64 312
        tctA 2395222 .. 2395243 +    -8  -4.81814   GTTCGAAACACACAA           GCCCCGTGG ATTTC CCA-GGGGC           TTTTGTTATCATAGT  85 51
         div 2396589 .. 2396605 +  -5.1  -4.24342   TGCTGGCTTCATTCA              TTTCCCG ATG CGGAAAA              TTTATTGCTCCGCAG  66 263
        mocR 2398441 .. 2398474 +  -8.9  -3.66654   GTATTTACGCATTGT     CAGCGT-GGCGTTGGT GCC ACCAAAGCCAAAGCTG     TTTGACATTACCGTG  74 142
        yfcK 2401847 .. 2401860 +  -6.7  -3.30124   AGGCCGTCTGACGGG               CCTGT AAAA ACAGG                TTATCCCACATGCCA  59 70
        yfcN 2407266 .. 2407278 +  -3.3  -3.54146   GCTGCTTTCTGTTCA                GGCTG ACG CAGAC                TATTTGCTTAAGAAA  50 171
         tar 2409264 .. 2409289 +  -9.8  -3.69684   CGGGGGTCGTTTTCA         TGTTCGGGCCA GTAAA TGGCCCG-ACA         TTATTACATCGCTTT  76 74
        fadL 2415524 .. 2415540 + -12.3   -5.5112   AAACGCATAAAAAAA              GCGACAC TGA GTGTCGC              TTTTTTATTGCTAAC 100 47
        yfdC 2424738 .. 2424751 +  -5.2  -2.79796   GTGTAGTGAATCCTG               CCGC CTAACT GCGG                TATACTGCGCTGGCG  49 71
    PAJ_1998 2426061 .. 2426077 +  -5.1  -3.07994   TGGCATTTGAAGAGT              CTGCATT AAA AATGCCG              TTCAATCCAATTAGA  51 144
        nagC 2433622 .. 2433639 +  -4.1  -3.59979   GGCGATGATTAACAG             GCCTG GCTTCCCA CAGGC              TTTCAGATCCGACCA  52 133
        yhjX 2448569 .. 2448590 + -15.9  -2.60032   ACGCCAGTAATTTCA           GAGGCCAGG ACAG CCTGGCCTC            CCTTTTTAGCCGCGA 100 31
        emrB NONE
        emrA 2455544 .. 2455561 +  -7.7  -2.78025   TCGTACTGCTTTGGG             TCGGCAC CTTT GTGCTGA              TGCTGTAGTTTTTGC  59 270
        ypdA NONE
        ypdB 2460656 .. 2460670 +    -5   -3.7347   TTCCCGCAACACTTC               GAGGAT TTG ATCTTC               TTCTTCGCTGTTGGC  59 523
        yghZ 2464190 .. 2464212 +  -3.2  -2.70932   GGCCGCAATTGAGTC           CGCGCTGCTG TAA CCGCACCGCC           TGGTTCGCCAGGCGG  42 13
        ypeC 2464739 .. 2464773 +    -7  -2.77182   CCTGTTGGCCCGAAC     GGGTTGGCAGGCCACC TGA GGTGTAGTGCCAGCTC     TACTTCACTCTGGCC  57 47
        nupC 2468384 .. 2468403 + -13.6  -5.38047   TTCTGCCCACATTAA            GGCGAGTC AAAC GACTCGCC             TTTTTTGTCTCCCTC 100 48
        insK 2469777 .. 2469789 +  -4.1  -3.38046   CACCTCCGCATCGTT                CAGTT ATC GACTG                TGTTTGCCATACAGG  50 80
    PAJ_2036 2471021 .. 2471047 +  -4.5  -4.11805   CGCTGAAAAAGACGG        CAAACTCAGCGT GATG ACG-TGCGTTTG         TTTCTCTCCTGTCCT  62 473
        yrhG NONE
        yfeC 2472536 .. 2472556 + -13.3  -5.90981   CGAACAATAAAAAAA            CCGGAAGCG CGA TGCTTCCGG            TTTTTTTTCGTCTCA 100 31
        flxA 2475372 .. 2475389 +  -3.3  -3.67597   TGTCTATATCTAAAA             CGCCGGT CTTG ACTCGCG              TTGTTGCGTCAGCAA  53 28
        yfeH 2477408 .. 2477441 +   -14  -2.77899   AAACGCGTAGGAAAT     CGCTGCCTCGTT TGCTCAATAT AACGAGGCAGCG      TAATTACTCACCGCG  88 44
        cysZ 2481784 .. 2481797 +  -3.9  -3.33298   CTTATTGCCATGAGA               CATAT AGAT ATATG                ATTTCTTTCCTTCCG  50 80
        cysK 2482875 .. 2482890 + -10.4  -5.24129   ATAAATGCCTAAAAA              GCACCC GGAT GGGTGC               TTTTTTGTGGCCCAG 100 57
        ptsH 2483549 .. 2483567 + -14.6  -3.91541   GTGCAACATCTTGAT             CGCGGACA AAC TGTCCGCG             TTATTGCTTTCGTAG 100 85
        ptsI NONE
         crr 2485929 .. 2485946 + -12.7  -5.82172   GAAGTAAACGAAAAA             CGGCACC TGAG GGTGCCG              TTTTTTTATGTTCGT 100 34
        amiA NONE
        hemF 2496843 .. 2496862 + -12.8  -3.65812   CGCGAAGGTGAAAAT            CGGGGCTG CATG CGGCCCCG             TTGTGTTACAGCGGC  90 99
        talA 2500474 .. 2500499 + -10.3  -2.70932   TTTTCCCCCTCTTTT         ACCGGGCGGGA GCAC TCCCGCCCTGA          TGCTTAACAAGGGAG  69 41
        tktB 2502574 .. 2502604 + -16.9   -4.3739   GGTCGCCTGGCCAAC       ACGACGTGCCAGC CCTGC GCTGGCACGTCGC       TTTTCTGAACGCCTG 100 77
    PAJ_2068 NONE
        citA NONE
        citB 2506718 .. 2506772 +  -6.3  -3.53091   GGCGCATGTACAAAC GC-ACCTGACCGAACGGGTGTCCCGC GCTC GCCCTGCGCCAGTTCAGTCAGGTGGC TTTCAGGGGCAAAAT  61 18
        ampH 2508117 .. 2508156 + -11.4  -2.62263   CCGCTCACCGCTGAT  GAGGCTGACTGGCTCACCC AAA GCGTGGGCCAGTC-GTCAC  TGCTGTGCCAGGCAT  75 41
        yulB NONE
        yneA NONE
        rbsA NONE
        rbsC NONE
    PAJ_2077 NONE
        alsE 2515723 .. 2515736 +  -2.3  -2.55253   CTGGCGCAGGAGTCT               GCATG AAAT CACGC                TGGCTTGGCATTGAT  39 20
        alsK NONE
        rbsK 2517585 .. 2517610 + -14.7  -2.95298   GCGCGTAACATTCAG         GCAGAGGCGCC TGGT GGCGCGTCTGC          TCTGTACTCCATCAG  91 33
        narQ 2522296 .. 2522320 +  -3.5  -3.17219   GCTTTCCATCGCGTC          CGGCGCTGC CGCGTGA GTAGTGCTG          TTGCTCGCCATTGTG  46 6
        narP 2523213 .. 2523226 +  -2.4   -3.7175   ACGTAAAGTAGAGTC               CTAC CCGTGC GTAG                TTTGCGTGGATTTTT  50 101
        acrD 2526462 .. 2526483 + -11.5  -4.77079   ATCAGGCAAAAAAAA           CGGCCTCTG TTCG CAGCGGCCG            TTTTATTCGTGTGTG 100 68
        yffB NONE
        dapE 2528708 .. 2528739 + -11.4  -3.10894   AAGAAAAAATAACGG      TCATGCGCCCCCGC CATC GCGAGGGCGCGCGG       TTACATCATCATAAT  79 240
    PAJ_2093 2533678 .. 2533694 +  -9.3  -4.41494   CAATCGCACCACTGA              CGCGGCC GGC GGCAGCG              TTTTCATTCGCGGTG  83 169
        gcvR 2536022 .. 2536032 +  -5.4  -3.16093   CAGGTGAGGAATACG                 TCTG AAA CAGA                 TAATTTTCCATTTGG  52 85
         bcp 2536576 .. 2536607 + -15.9  -2.73124   AAGTCAGCCTGATGT      CTTCAGGGCGCGG CATCGT CCGCGCCCTGAAC       GTTTAGCGACTCAGC 100 29
        yisR 2542587 .. 2542625 +  -7.3  -3.54307   GATAGCGTTATCCGC   GATGCTGATGCGAATGC GCTCG GCCGTCGCCTCAGCCTC   TTTCAGAGGCGTGTT  63 255
        yfgC NONE
        yfgD 2551858 .. 2551874 +  -2.9  -4.64861   AGCGGTACTGGAAAT              CCTTTAG AGG CCAAGGG              TTTCTTTTACGAAGG  65 19
        purM NONE
        purN 2556646 .. 2556670 + -15.7  -4.09685   ACGCCCACGAGTAAC          AGGCAGGGAGC CAG GCTCCCTGCCC          TTTTCAGCCATAGCG 100 27
         ppk NONE
         ppx NONE
        tehB 2565633 .. 2565643 +  -4.6  -4.58283   TAAATATTGCTGTCG                 CCCG TCT TGGG                 TTTTTACAGGAATTA  71 92
        mgtE 2567825 .. 2567837 +  -3.3  -4.63527   GCGCGTCGTCGCATC                CTGCC TCC GCCAG                TTTTTCCAGTAATGC  67 442
        cinB 2573297 .. 2573318 + -11.6  -5.31456   ATGCGGTAAATAAAA           TCAGCCGG ATAGCA CCGGCTGA            TTTTTTCTGGCTTAA 100 287
        ydeD 2574736 .. 2574752 + -10.8  -3.68366   GCTAAAATGCAAAAA              GCCCGC ATAAC GCGGGC              TTCGTTTTACACTGC  81 149
        trbJ 2581589 .. 2581604 +    -9  -3.53012   ACAAATGCAAAAGCG              TGACGC TGAT GCGTCA               TTTGAGGCGCGCCCG  71 156
        trbL 2583569 .. 2583604 + -10.3  -3.68244   GGTGATCGCTGACCA    GCCCCACGCAACCCC GCCTCA GTGCTGGCGTGGGGC     TTTGCCATTAGTAAT  79 362
    PAJ_2136 2589424 .. 2589442 +  -6.7  -3.95584   GACTCTTTGGTGATG             GTCACGT CGTGC ACGTGGC             TTTCATTGATGCCCG  66 132
        xseA 2592377 .. 2592388 +    -3  -3.16534   AAAACCGAAACGAAA                GAAA AGCA TTTC                 TTAACTATACTTCCT  45 10
        prt1 2593787 .. 2593802 + -11.8  -5.08255   ATAAGCACAAAAAAA              GGGCCG CGAG CGGCCC               TTTTATTTTACCCGT 100 366
        sseA 2614939 .. 2614963 + -14.2  -2.60212   TTGCGAAATAAGAAG          ACGCGCGGCC GGTGA GGCCGCGCGC          GTTGTCAGATAATAC  88 97
        suhB 2620762 .. 2620783 + -17.3   -4.4846   AGCGCTAAAAGAAAA           GGCGGCACG ATAA CGTGCCGCC            TTTCTTATTGCCTTG 100 33
        csiE NONE
         hmp 2629354 .. 2629370 +  -5.1  -2.90496   GCCGATTTTTCCGGT              TTGTGCG GTG CGCATGA              TGGTTTCGACGCAGG  48 323
        yfhD 2639313 .. 2639333 +   -14   -5.1356   AATGAATTAACTTTC            GCGCTGCG CCTGA CGCAGCGC            TTTTTGTTGCTGGCG 100 31
        yfhH 2641651 .. 2641667 +  -3.8   -2.8511   GTTTACCTGCATCAT              TTTTGT GATAA ACAAAA              TATGCTACTGTCCTG  45 169
        yfhL 2642471 .. 2642489 +  -5.2  -3.82097   ATAGCCATTAGCGAC             GCGCTTCT CGC AGCAGTGC             TTTCATGGCTTTCAC  61 410
        nadB 2653855 .. 2653866 +  -2.2  -4.08216   ACGATAAGCGAGTAA                C-GCG CTT CGCAG                TTTTCAGCCCACTGG  56 404
        srmB 2655722 .. 2655751 + -12.3  -4.83615   ATCAGCACGGACTTA       AAAAAATCGCCTC CAGT GAGGCGATTTTTG        TTTTTATAAGGCCTG 100 41
         ung 2657252 .. 2657273 + -15.1  -3.55444   CGCCATAATCACAAA           CGGCCGCGT CAGA GCGCGGCCG            TTTGCAGGGTAAGAC 100 42
        ppnK 2658897 .. 2658912 +  -3.2  -4.04318   AGCGCGCCCTCTTTA              CTGGAT AAAA AACCAG               TTTATACTGTATGAA  58 46
        recN 2660637 .. 2660647 +  -6.8  -2.65442   ATATGCACTTTTTTA                 CCAC AGC GTGG                 TCATATGCATGCTCT  53 40
        smpA 2661245 .. 2661260 + -10.4  -4.77036   ACAGAACGTAAAAAA              GGCGCT AATC AGCGCC               TTTTTCATGCTCGGA 100 111
        smpB 2663095 .. 2663120 + -14.7   -5.7827   AATGAAGTCTACTAA         GCCCGCACAGC ACAA GCTCTGCGGGC          TTTTTTATTTCTATT 100 468
    PAJ_2203 2664465 .. 2664498 +  -2.3  -2.89527   CTAATTACGTAAAAA     TAATCGCGAAGGTCG GACT CGAACATCGCAACTA      TCCTTATGATCTTAA  40 37
    PAJ_2207 2669284 .. 2669299 +  -3.4  -4.48072   CATCTAAATACACTG              TTAATT TCGG AATTAA               TTTTCTAGTCGATAT  63 91
    PAJ_2208 2670889 .. 2670907 +   -11  -2.67694   CGCCCAAGCCGAGGA             TCGCCGTT GGC GACGGCGA             TGATGTCCTCATGCT  67 339
    PAJ_2210 2675084 .. 2675109 +    -9  -4.10552   GGATACTTACAATAA         TACCTCTGCC ATTACC GGCAGAGGCA          TTTGCTTTCATGGAA  78 522
    PAJ_2214 2682701 .. 2682711 +  -3.2  -2.72463   CAGCACGGAAATTCA                 TCTC CGT GAGG                 TGGTTAAAGCTGCAT  42 290
        ycfQ 2684749 .. 2684760 +  -5.8  -3.09492   TTGTTGAGGCCGCGC                TCGC CGGG GCGA                 TATTGCCGTTGCAGC  53 48
        mhpC 2685819 .. 2685838 +   -10   -3.1247   GGATAACAAAACCAT            CGGCACAGC TTT GCTG-GCCG            TTCGGTGTGGACAAT  70 57
        cirA 2688709 .. 2688720 +  -2.2  -2.55351   GCCCCGTCAAGGCGC                CGTC ACAG GATG                 ATTGATCTCAGCGAG  39 65
        fatB NONE
        fatD NONE
        fatC 2691848 .. 2691862 +  -2.8  -3.08464   ACATCAACGAAACCC               TGCC CTCATCA GGCA               TTACCTCAATCATCG  43 92
        fecE 2692556 .. 2692578 + -13.4  -2.78996   GCGCACCGGGCGAAA           CGCCGGTGGT TAT GCCATCGGCG           CTTTCAGTCAACCTG  85 45
        rraA NONE
        serA 2695172 .. 2695215 + -14.1  -4.59853   CGCAAAAGGAAGCCA CCGTATGATATGCCTGACCAC ACCG GAGGTCAGGCATA-CAT-CGG TTTTTACCCGGTTGC 100 18
         gnl NONE
        ttuB 2697516 .. 2697529 +  -9.5  -3.95448   CATCCCCTCCCCTGA               GGCGC TCCG GCGCC                TTTACCTTTTCCTGT  79 42
    PAJ_2229 2701919 .. 2701939 +  -9.7  -5.00616   GGGTTTTGTTGAAAA            GGGCGCATA GCG TATGCACCC            TTTTTTGACCGACGA 100 128
        ydeP 2704003 .. 2704017 +  -2.9  -4.12254   GTCCCGTAGCGGCCA               TAATC AAACA GATTA               TTGTTTATGATGATG  58 505
        ycaN 2706535 .. 2706571 +  -8.6  -3.37236   CTTACGCCACAGGGT   GGTC-GGGCTGATGCCA AGGA TGGCTGCCGCCCTGACC    TTATCCCCTTGAGTT  62 57
        ompC NONE
    PAJ_2241 2715431 .. 2715441 +  -8.2  -2.84988   CGGCCTGATTCAGAG                 GCGC TTA GCGC                 TGCTTCGGTTTTAGT  62 189
        rimL 2719781 .. 2719795 +  -3.4  -5.10933   TCCATGCTTTCTGTC               GCCGCG TGA CGTTGC               TTTTCTTTTGGCTAA  75 48
        baeR NONE
        baeS 2721805 .. 2721821 +  -5.1  -4.19238   GCCAAGTATCGCGTC              CCATTCC TGG GGAATGA              TTTTGAGCTTACCGC  64 109
    PAJ_2247 NONE
        fhuB NONE
        fecE 2726212 .. 2726230 +  -6.6  -4.63527   GGTCGCGTGCTACGG             CGCACTTG AGA CGAGGGCG             TTTTTGCCGTGCTGG  77 205
        dppA NONE
        yddR NONE
        yddQ NONE
        dppD NONE
        oppF NONE
        speG 2738068 .. 2738086 +  -8.8  -3.36175   TTTCATCTGTCTCAA             TCGGGCTA TCA TCGCCCGA             TTCTGCCGCTTTATT  66 513
        ygaM 2741393 .. 2741413 + -14.7  -5.65177   CTGCCGTTATCATCA            GCCTCGCTC AAT GAGCGGGGC            TTTTTTTATGCCTGT 100 49
        nrdH 2741897 .. 2741908 +  -7.2  -2.63089   AATCCGTGGCGATGG                GCGG ATAG CCGC                 ATGTTTCCACTGGTC  56 18
        nrdI NONE
        nrdE NONE
        nrdF 2745624 .. 2745639 +  -2.5  -3.54543   GATGACTGGAAATTA              TCGCG ATAAGG CGTGA               TTTCAAGCCATGAAT  47 250
        proV NONE
        proW 2748120 .. 2748140 +    -9  -3.29144   ATCCTGAATCTTGAG           C-GCGGCAG TCAG CTGCCGCCG            TTATCGCGACAATAA  69 34
        proX 2749189 .. 2749208 + -11.4  -4.78149   CGGCAGGCAGACGAA            GGGCGGAC ACCT GTCTGCCC             TTTTTCCGTTATGAC 100 45
        ygaY 2750739 .. 2750751 +  -4.1  -2.59742   ACTCAGCAATGACGC                TGCCA CCG TGGTA                ATTATAAAAGTTGAA  44 249
        mprA 2751376 .. 2751395 + -10.7  -5.08824   ACCCTCTTTTATCCG            GCCAGCG CTTAGT CGCTGGC             TTTTTTGGCTCGGGC 100 85
        emrA 2752827 .. 2752842 +  -6.8  -2.53876   CATCACGTCTTTCGG              GGTGGC AAAC GCCATC               TCGATTCCGATAACG  52 215
        emrB 2754202 .. 2754238 + -10.2  -4.56597   CTAGACGAACGCGAT   GGGGTTCTGGCGTGG AAGTCACG CC-CGCCAGAACCCG    TTTTTACGCCCAGCG 100 37
        ykvN 2756141 .. 2756152 +  -3.6  -3.35867   ACCCGCTTTGCGGAA                GGCT TCGA GGCC                 TTCATTAAAGGTTGC  48 352
        trxC 2757604 .. 2757621 + -12.7  -4.39571   CCTGTAAGCGCAAAA             GGCCAGC CCGT GCTGGCC              TTTTCCCTTTGTCCG 100 34
        yfiP 2758368 .. 2758384 +    -3  -3.63515   AGGTAACACTCGCTC              TGACAG GCCGA TTGTCA              TTATTCAGGCTGGGA  51 35
        yfiQ NONE
        pssA 2762605 .. 2762631 + -12.3    -2.914   TACTGTAAACCCTCA         GAATGCCGCAG CCTGC CTGCGGCACTC         CTTTCCTCTGCTACA  80 33
        azlB 2766208 .. 2766251 + -22.8  -3.76224   TTTTCACCGGTTACG CACGTAAAAAAGCCCTGAAC GAAA GTTCAGGGCTTTTTTACTTG TTTGATGCCTGGCAG 100 424
        yfiO 2777510 .. 2777526 +  -9.4    -5.252   TGAGCCACAAAAAAA              GCAGCC CTGGA GGCTGC              TTTTTTATGCGCATA 100 54
        yfiA 2778113 .. 2778128 + -11.8   -5.4505   TCCTCACCTTCCTGA              CGCGCC TACG GGCGCG               TTTTTTGTTGACAGC 100 47
        pheA 2779512 .. 2779529 + -11.3  -4.78149   AGTAATCAGTAAAAA             GGCATCC AACT GGATGCC              TTTTTAGCTTATGGC 100 36
    PAJ_2294 2782856 .. 2782872 +    -3  -4.91084   CAGGGGCACATGCGC             CGT-CAC CGCC GTGGACG              TTTTGTTCTTACGTG  71 320
        ypjD 2787979 .. 2787991 +  -4.1  -3.52472   GTTGATTGTCACACT                CATCA TTA TGGTG                TTGGTTTCAGCCTAT  52 81
        yfjD 2789365 .. 2789382 +  -9.8  -4.34402   GCTGTTATAAAAAAA             CGCCGC TCATGT GCGGCG              TTTTACTGTCCGGAC  85 163
        mutS 2805630 .. 2805659 +  -4.2   -5.1244   GCGTCAACCTTCTCT       TGCGCCTGCG TTTCCCATTC TGCTGGCGCA        TTTTTCTGTTACTGC  77 76
    PAJ_2315 2806269 .. 2806303 +  -7.8  -3.41527   GCAAAAGTTATTGCG     CAGGCAGGGGTAACTT AGC GGGTTGCGCCTTCCTG     TTATCCTCACACTTC  64 13
    PAJ_2316 2807085 .. 2807104 +  -9.3   -4.2586   CGCAGATAAAAAAAA            GCGATGG GGTTAA CCATCGC             TTTCTGTTGATGTGC  80 43
         iap 2820180 .. 2820190 +  -8.2  -3.53012   CTGAGCCAACAGCGT                 CGGG CGC CCCG                 TTTCCCCACGCGGCG  69 338
        tdcF 2821810 .. 2821824 +  -5.8  -3.25223   AAAAACGTCTCTCCA               CATTAT TTA ATAATG               TTGGTGATATCCCTC  55 99
        glnH 2822731 .. 2822743 +  -9.1  -3.02698   AGGTCACGCCTGTGT                CCTCC TGA GGAGG                CTTTCTATGCGCTAC  66 54
        yckJ NONE
        yecS NONE
        glnQ NONE
    PAJ_2338 2826125 .. 2826137 +  -6.9  -4.25104   CCGGGTGGTGGACAG                CGTCG AGA CGGCG                TTTTGATCGCAGCCG  71 7
    PAJ_2342 2831586 .. 2831618 +  -3.4  -3.27271   GACGATCCGGGTCAT     GGC-TGAGCGCATTT TGGG AAAGGCGCGCAAGTC      CTTTTACTATTCTGG  48 20
        ygcM 2832093 .. 2832147 +  -8.5  -2.78463   TAATCTGCTCTGTAC GGCAGC-GCAGGGCCGGTCACCCGCTT ACT GACCTGTTGATCGGCC-TGCTGCCGCC TCTCCTGCACGACAT  62 38
         ppa 2832860 .. 2832882 + -14.9  -2.52742   GCGAAGCAATAACGG           TCAGGCGGC GAGAG GCCGCCTGA           GTCTTATCAGGCGAT  89 29
        yjiH NONE
    PAJ_2347 2834899 .. 2834934 + -13.2  -2.91383   GCTGTAATGCTGTGG    CTGCACAGGCTGCGGT CAGC GCCGCGACCTGTGCCG     TCTATACCTCGGACT  85 34
        barA 2847105 .. 2847115 +  -6.8  -2.54812   TTTGCCACACCAATC                 GGCA CCT TGCC                 CTTGATGCTCTGGCT  50 308
        garD 2856244 .. 2856255 +  -5.8  -3.96624   GTAGCGCAGCCCTGG                CTGG TGGC CCAG                 TTTGTCCTGCACGTC  64 346
        queF 2859699 .. 2859714 +  -4.6  -2.62184   GTTCCACTTGAGTCA              GCCCTG CCGA CAAGGC               TACTCTGGGCAAGGC  46 79
        ygdH 2861196 .. 2861206 +  -8.2  -2.63257   TCAGGAGGCAGCCGC                 CGGG CTG CCCG                 TACCTTATGTCACAT  61 42
         xni 2861981 .. 2862008 + -22.8  -3.17723   GACTAGCATCGTCAA        CCGATCGGGCGC CATC GCGCCCGATCGG         TTCGATTAGCGCTCG 100 35
        csdA 2866430 .. 2866441 +  -2.2  -3.18024   GCGCAGCGCCATCGA                TCTG TTAT CGGA                 GTTTTAATAATGAAC  43 7
        ygdK 2866900 .. 2866926 +  -7.8  -2.77013   ACGGTATCAGGGTTA         AGCCTGGCGCGC CGC GCGCGCCAGAAA         CTTCTTCAGGGCATG  59 25
        dsdA 2871001 .. 2871041 +  -8.1  -3.62572   GCCTCTGAACAGCAG  GCCAACCTGCGCGGCCTGA TCC TGAAGCCGCGTGGGATCGC  TTTCCGGTCCTGGTG  68 51
        argA 2873923 .. 2873942 +   -15  -3.36749   AACCTGACAGTTACC            GGGCGGCA GCCA TGCCGCCC             TTGCTGTTACGCCTG  93 34
        mutH 2893633 .. 2893643 +  -4.6  -2.65942   ACAGCCTTATTCTCG                 CGTC CCT GGCG                 GTATTTAAATGTGAG  46 40
        ygdQ 2894438 .. 2894458 +  -9.6  -3.12437   GCACTAATGTTGTCA            AGGGCGGC TCCGC GCCGCCCG            GTTATTTTCAGATTG  70 34
        ygdR 2894782 .. 2894811 +    -7   -3.6979   ATGCGAAAAGTATCG       GCCTGTCGCCCC TCCCCC GCGTCGGCAGGC        TATTTCTCTCTGTTA  67 41
         tas 2895945 .. 2895991 + -12.3  -2.84325   ACCTATCCAGCCCCC TGACGGGGACGACCAGCCGTGC GGTG GCACGGCTGG-CCTGTCAGTCA TCGTCTTTCAACAGG  80 23
        lysR 2898650 .. 2898662 +  -3.3  -3.60098   AAAAACTGCCTATCA                GGCTC AGG GAGAC                TTTGCGATCGGCCAT  50 387
    PAJ_2400 2900550 .. 2900561 +  -7.2  -3.74693   TAGCGGATAGGTAAT                GCGG TTCT CCGC                 TTTGCTGACCTCGCC  67 133
        fldB 2908111 .. 2908132 +    -8  -3.72576   CTGCATCAGCCAGAG           CCGTAAGG TCTTGC CCTTGCGG            TTTCGTGCGACCAGC  69 248
        ygfZ 2910305 .. 2910325 +  -2.5  -5.08824   GCCAGCAATTAACAG            GTAGATTGC GCA GTGATCCAC            TTTTTTCAGTACGCG  75 438
        glvR NONE
        bglA 2913012 .. 2913034 + -15.6  -2.82623   AAGCTGTAAGTCGTT           TGCCGCAGCG CCC TGCTGCGGCA           TCATTCTAGCGCCCG  95 32
        ygfE 2923837 .. 2923850 +  -8.1  -4.03234   GGCATGATATAATGC               GTCGC TTAA GCGAC                TTTGTCTGGGGGACA  73 295
        ygfA 2924642 .. 2924656 +  -2.8  -3.61517   TTGCAGGTACTGAGC               GGCA ATGTTGA TGCC               TTGTTCAGCGAAAAT  50 203
        iciA 2928162 .. 2928175 +  -3.7   -3.5764   TGTGCAGAAGTATCT               GCCAC AGCC GCGGC                TTTAAACATGCGGTT  52 419
        yggG 2938047 .. 2938068 + -13.1  -2.89564   TAAGTCAGAATCAGA           GGGATAACC CTGA GGTTATCCC            TCTGTCGCATCAGCC  81 38
        metK 2943114 .. 2943133 + -12.8  -6.60239   AAAACGTCTCAAAAA            GCCCTGCC TCGC GGCGGGGC             TTTTTTTTTCTTTTT 100 46
        galP 2944948 .. 2944971 +  -8.2  -5.45652   AATATGTCCCCTAGA          GCCAGTCA AGGTAAGC TGACTGGC           TTTTTTCTTGCCGCT 100 50
         tar 2947098 .. 2947110 +  -4.9  -2.69468   ACAATAAGGCAGTTC                CATTA AAA TAATG                TCATGTCTGCCCGTC  46 20
        sprT 2947737 .. 2947748 +  -5.8  -2.80245   GCGGATTCTCATTCC                GCCT GAGC AGGC                 ATTCTGTTACCCTGC  52 41
        nucM 2948538 .. 2948558 + -11.1  -3.70902   ACTGTTTCACAGCCC            CGCCGCG TCAACCT CGCGGCG            TTTAGCTCTCAGGGA  81 59
        yggJ 2949290 .. 2949301 +  -2.2  -2.52896   CGGCACTTCAGGTGA                GGTT TGGT GACC                 TGGGTTAAGCGATAC  39 6
        gshB NONE
        yqgE NONE
        yqgF 2951489 .. 2951504 +  -7.5  -3.55444   TCAAAGGTTTGCATT              CCGGC CTGCGC GCCGG               TTTGCAAAATAGCGG  63 80
        yggS NONE
        yggT 2953693 .. 2953704 +  -3.6  -3.51034   GGCATGGATCTGTTC                CCGG GTCT CTGG                 TATTTGCTGTAAATG  50 2
        yggV NONE
        yggW 2955931 .. 2955953 +  -6.2  -3.99917   ACTTTAATGATGCTG           GCAGTCAGCA CCT TTCTGACCGC           TTTATGCCCTTTTTT  64 493
        sgcA 2957324 .. 2957346 +  -5.5  -3.14693   CACGCCGATCTCGGT           TCGGTCACG CCAGA CGTGGCAGA           TGTGTTCGTGATGGC  52 171
        sgaT 2958904 .. 2958921 + -12.7  -5.00884   GATTGACAGGCATCA             GGGGCTG ACTC CAGCCCC              TTTTTTCAACAACGT 100 35
        melA 2963562 .. 2963598 +  -3.6  -2.62983   CGGGGACTGGCTGCC    CGCCTGGCTGCACA AATAATGCC TGTGTCTCCGGGCG    TGCTGTCCGGCTGCG  42 7
        melB 2965209 .. 2965227 +  -5.9  -4.28254   CGCACGGGACAGACA             GGCCGGT ATGAA ACAGGCC             TTTTCAATCTTCCGG  69 157
        mutY NONE
        yggX 2966677 .. 2966696 +  -7.8  -4.11216   AAGCATAACTTTTTT            TGGCCTCA GTAC TGGGGCCG             TTTTCCAGGTCAGGC  73 33
        mltC 2968081 .. 2968106 + -11.8  -2.62263   GCCTGACGGGCCGGC         CGGATGCGCC TTCCCT GGCGCAGCCG          TCCTCTGCGCGGCAT  75 304
        yhdH 2972598 .. 2972639 + -15.1  -2.52516   CCCGGCTCATCCAGA CTGAGCCTACGGGCGGG CTATCTTC CCCGCCCGCAGGCTCGC  ATTACTGCTGACAAG  95 184
        ytfG 2981174 .. 2981220 + -11.6  -3.91144   CGTTTTGCCCTGCGA TCGCGCCGTTGTTTACCGGAG CAGAGT CGCCGGCAGGCAACGGCG-GA TTTCTCCCCTGTCGG  88 59
    PAJ_2473 2983181 .. 2983194 +  -3.8  -4.14511   CCCGATCGTCTGCTC               CTGC CAGCAC GCAG                TTTTCACGTAGCCTT  60 416
        treF 2985354 .. 2985372 + -14.6  -4.58395   GAAGCACGTAAAAAA             GCCGGGAA CAT TTCCCGGC             TTTTTACCGCCTGCG 100 49
        yfdX 2991095 .. 2991126 + -14.7  -5.29782   GTTATTTAACTGCTC      TGTCGCTTTCATT ATTTCG AATGAAAGCGACA       TTTTTTATACATATC 100 64
         tcp 2993096 .. 2993126 + -12.4  -3.03441   CGCGTTTTATCGCCT       CACCCGGGCCAGCG CCT CGCTGGCCCGGCCA       TGTTACAGCATGATA  81 65
        mcpB 2995276 .. 2995302 + -10.8  -3.03829   CTGAGATGTTATCGC         CACGCCAGCG CCCCACC CGCTGGCGCG         TGATTGTTTGGCTCG  74 81
        tlpA 2997433 .. 2997453 +  -9.7  -3.96469   ACGTGGAAAAGTCAT            GCCAGCG CTGAATA CGCTGGC            TTCTTCTTGCCCTGT  81 41
    PAJ_2485 2998641 .. 2998662 +  -9.4  -3.24245   TGCCCTGCGGGAAAT           GCGCGAGG CCCTTT CTTCGCGC            TTCCCTTATACATCC  67 44
    PAJ_2486 3000444 .. 3000455 +  -5.8  -3.91032   CGCAAAAGGTTCAAA                GGCA TAAA TGCC                 TTTATAGCCTCGTTC  64 343
        iolT 3002390 .. 3002425 + -15.6  -3.65046   GTCATGCAGTATAAC    CGCCCCGGATA-CAG AGACAGG CTGATATCCGGGGCG    TTATTACCGTCAAGC 100 223
        ygaY NONE
        eamA 3006274 .. 3006326 +  -4.8  -3.25823   TGAACTGCAGCGCCA GGTCG-CAGTCGCCATTACGTATCA GTTC TGATACGCCCTGTGGGCTGGCGACC TTGATCTCAAAAAGG  50 460
       cndP1 NONE
        citH 3009543 .. 3009572 +  -7.1  -2.62244   GCGGGTGACGTGAGA       GGACAGGTGTACA GGGT TGTGCACCTGACG        GATTTTATTACCGCG  56 28
    PAJ_2495 3010681 .. 3010711 +  -8.4  -4.63218   GTATACGGCGTATTG      TGAGCCAGAACCG CCCAGA TGGTTCTGGC-CA       TTTTGTTGGCCAGCG  82 316
    PAJ_2497 3013064 .. 3013074 +  -2.4  -2.97667   CAACGATTAAAAGCC                 CGCC GCA GGCC                 TGATTTAGTCCCTCC  42 12
    PAJ_2498 NONE
    PAJ_2499 3015405 .. 3015424 + -11.4  -5.64274   GAAATCTGCCCGGAG            GGCCTGCG CTGC TGCAGGCC             TTTTTTTATGGCTGA 100 445
    PAJ_2501 NONE
    PAJ_2502 NONE
    PAJ_2503 3021899 .. 3021919 +  -4.6  -3.15366   CCGACGGCAACACGC            CGGTGCCG GGCTA CAGTACCG            TGTTCCCGTTTTACA  50 346
    PAJ_2504 3024811 .. 3024828 +  -6.3  -3.28712   TTATGAAAAAACTGA             CCA-TGGC GCC GCCACTGG             TTGTCGAGGACAAGG  59 35
    PAJ_2506 3030617 .. 3030636 +  -8.6  -3.44284   AATTCAACAAATGCT            CAACACCT GTCA GGGTGTTG             TCTTGTTCATCGGCA  66 82
    PAJ_2507 NONE
    PAJ_2508 3033684 .. 3033701 +  -5.5  -4.11394   TATCCCTCATCACCG             TTGTGGC CATG GCCGCGA              TTTTGGGACTGGCAT  64 88
    PAJ_2509 3035511 .. 3035545 +   -13  -2.93623   TAAAGTCAGATATGA     GAGCTAGTCCGGTAAG TCA TTTATAGGACTAGCTC     TAGTCTTTTACACCA  83 38
    PAJ_2510 3038442 .. 3038458 +  -3.8  -2.58579   TATCATGCACTTAAT              TAAGAT GTGAA ATCTTA              CTTATAGAGAATTGG  44 57
    PAJ_2511 3040371 .. 3040398 +    -7  -4.24342   GATTCTCACCCCTGA        GGGATACTTTCCC TTT GGGACGGT-TCCC        TTTATTAATAAGGAA  73 371
    PAJ_2512 3041567 .. 3041598 + -12.4  -2.93853   CTGACTCACCCTTGC      GGGGATTTATCTCC CTGC GGAGACAAATCCTC       CTTTAATTAAAGAGG  81 294
    PAJ_2513 3043058 .. 3043091 + -11.1  -5.40072   TTTTCCACTCACCGG     TGGCGCA-CTGTCC GCCACCG GGACAGATGCGCCG     TTTTTTTAGAGACGC 100 44
    PAJ_2514 3044128 .. 3044156 +   -14  -5.03314   CGCCATCATCCCCCT       GAGGGCACTCTCC TCAG GGAGA-TGCCCTC        TTTTTTAAACGTAAA 100 61
    PAJ_2515 3045172 .. 3045197 + -11.1  -4.56597   CAGGTCTGTCAGACA         ATGGCCACAGC ATCT GCTGTGGCCGC          TTTTTCACCCGAAGG 100 67
    PAJ_2516 3046038 .. 3046053 + -11.8  -6.12458   TTGCGCAAAGTTAAA              GGCCGG GCAA CCGGCC               TTTTTTATTTTTTTG 100 87
    PAJ_2518 3048891 .. 3048918 + -12.9  -3.08015   CATCAAGGTTGAAAA        TAAACAAGGGG ACTCCC CCCCTTGTTTA         TATTGCAATACTTAC  83 29
    PAJ_2523 3055412 .. 3055432 +  -3.3  -3.06796   TTCATGCATTTAGCT            CTAACTATG CGT TATAGTAAG            TTAAGTGGAATGCAA  45 194
    PAJ_2524 3056797 .. 3056816 +    -7  -3.67588   GGACGGACGGAAAAG            GACGGCCG CTGA TGGCCGCC             TTTGCATGGCATTTC  67 340
        umuC 3067475 .. 3067490 +    -9  -3.74749   AGAACAGAAATAATG              CCCCAT ACTT ATGGGG               TTTCGCGTTTGTCCT  74 68
    PAJ_2533 3071309 .. 3071320 +  -5.8  -3.55444   GGTAGTGTGGTCTGT                TCGC GTTT GCGA                 TTTACCAGATAAGCA  59 232
    PAJ_2538 3076980 .. 3076997 +  -4.2  -2.72379   TCAGACAGCAAATGG             CTCTTT CCCAAA AAAGAG              TAATTACAGGGTTAA  44 5
    PAJ_2539 3078126 .. 3078156 + -12.6  -3.60805   TAATGGATGTGAGAA       GTCCAGAGGATGCT AGG AACATCCTCCGGAC       TTTAAAGTCCCGTGT  89 161
    PAJ_2540 NONE
    PAJ_2541 NONE
    PAJ_2542 NONE
        pleD 3081644 .. 3081660 +  -9.3  -3.17571   AGCTTGCGCATCACC              GGCGCGG CAA CCACGCC              TTCACTTCCGCCGTT  63 107
        ftnA 3094771 .. 3094792 + -17.3   -2.7314   TCCGCCTAAAATAAA           CCGGCCCAC GCAG GTGGGCCGG            TAGTGTGATTTGCGC 100 32
        cytR 3099911 .. 3099921 +  -2.4  -3.44848   CGGGAATGACCTGTT                 CCGC TCC GCTG                 TGTTTGATCAACGCC  47 153
        yxeP NONE
        ylaC 3117823 .. 3117855 + -12.1  -3.01712   CCAGCGTAACGACTG     CCGCCTCGGCCCGTG AATCC CA-GGGCC-AGGCGG     TATTGAGCCGGAAAC  81 69
    PAJ_2575 3122630 .. 3122654 +  -4.9  -3.65827   GTGTTTGAGTAGCTA          CAGATGACGGC AAA GTGGTCACCTG          TTTCAGTCACAGTTG  57 47
    PAJ_2576 NONE
        sfmC 3123866 .. 3123891 +  -2.6  -4.08767   AGTGGCGCAGCGCTG         CGGC-TCAGTA AAGTG TAATGATGCCG         TTTTCGCCGCATCCC  56 15
        fimD NONE
    PAJ_2579 3127790 .. 3127811 +  -2.9  -3.04715   CACCATAAACGCCTG           GGTGTCGCT CATC ATCAACACC            GTTTTGCCGAAGGTG  42 520
        ptsG 3131990 .. 3132011 +  -5.1  -3.87815   GACGCTGTCCGGGAT           GACAGG-CTG ATG CAGGCCTGGC           TTTCTGACGATGGCG  61 16
    PAJ_2584 3133121 .. 3133132 +  -2.2  -3.53012   CAGAGAAGCGAGTAT                GTGA AAAA TCGC                 TTTCGGGCGCAGCGG  47 58
    PAJ_2585 3133977 .. 3133988 +  -7.2  -2.72049   GTCCACAAAGCCTGG                CCCG GTGG CGGG                 TGATTAGCGGATATC  56 52
        pcaH NONE
        pcaG 3139157 .. 3139176 +  -7.8  -3.16881   GCCCACGACAATGTC            CTTGCCGC TTCG GCGGCAAA             TTCATAACATGAGTC  62 51
        ydcI 3140249 .. 3140260 +  -7.2  -3.61398   TCTTTGATTTCATCC                CGGC TGAC GCCG                 TTATTGAACGCGGCC  63 150
        pcaR NONE
        metC 3147493 .. 3147506 +  -2.3  -3.19293   GTCGTGATATTACAC               CCGGT CATG GCTGG                TTAGCTGTTAACATT  43 74
        yghB 3148327 .. 3148373 + -10.1  -3.22521   GAAACACGCCTGACA GCGGGTTGCGTCAGGCGGGCGGT TCG GCCA-CCGTCTGGCGC-ACCCGA TTCACTTCCTCTCCC  73 28
        dkgA 3150307 .. 3150328 + -13.7  -5.64274   GAGTGGGTACGCATC           GCCTCTCCC GGCT GGGGGAGGC            TTTTTTTATGGCTGC 100 67
        fliC 3151719 .. 3151741 + -17.8  -3.01791   ATCTCCGAAGGGCAC           GGGCAGGAGA GGC TCTCCTGCCC           TGTTGAAGCACGAGT 100 40
        licR NONE
        frvA NONE
        frwB NONE
        fruA 3160538 .. 3160560 +  -5.5  -2.72043   CTTGACCACGGAAAA           GCCTTTCCG CTGAT TGGACAGGC           CTTTCGCGCCGGGTT  48 287
         fba 3162208 .. 3162238 + -16.9  -4.57569   CAGCCTGACGAACCA       GCGGAGACGGTAC TTCCT GTACCGGCTCCGC       TTTTTGCCCGCGTCC 100 148
        mdaB 3163904 .. 3163916 +  -6.3  -3.08966   ATCGCACGCATCTCA                GCAAA ATT TTTGC                TTAAATAGCGTTTCA  55 9
        ygiN 3164286 .. 3164300 +  -8.5  -4.66163   ACACGCACAAAAAAA               GCCCC ATTCA GGGGC               TTTTTCCATCAGGCT  88 51
        tolC 3170466 .. 3170486 + -19.7  -3.65991   CTAACTGATCGCCCT            GCGGGCCGC TTT GCGGCCCGC            TTCTCTTAAAAACGT 100 33
        ygiB 3171260 .. 3171278 +    -3  -3.29144   CACCTCCAGCCGTTC             GCTGGG AGGCTAA CCCCGC             TTATGCAACGCATCG  47 13
        ygiC 3172451 .. 3172472 + -15.9  -3.57144   GAGTAGCGCTTTCCT           CCAGGCCAG CACG CTGGCCTGG            TTTCCCGCTAGCCGA 100 35
        yqiC 3175171 .. 3175183 +  -9.1  -3.72893   TCACCGGACGGCTGT                CGCCT TTG AGGCG                TTTGGTGGACGCATC  71 331
        ygiM 3181498 .. 3181516 +  -5.3  -4.18401   CACCGCTCGCTATCA            GGGG-ATC GTAA GATGCCCC             TTTTGGCCTGTCTGC  66 47
         cca 3182843 .. 3182880 + -10.5  -2.54896   CTGTCGAACAGGGCT   TAGCGTAACGCGGCCAG TTGC CCGACCGCGTTACCCTG    TGGCTTACATGAAAA  69 18
        ygiH 3184977 .. 3184990 +  -9.5  -5.21709   GTAAGCGTAAAAAAA               GCCGG TTAA CCGGC                TTTTTTGATCTCAGA 100 37
        rpsU 3186564 .. 3186590 + -12.3  -3.94823   CGAGTCAAGTAAAAG         GCCGTGCTTTC CGAAA GGAAGCGCGGC         TTGTTGTCGTTTATG  91 81
        dnaG 3188426 .. 3188436 +  -2.4  -3.64393   GGCTGAAAAATTGAG                 GGGC TAA GCAC                 GTTTTGTTTCTGTTG  50 81
        rpoD 3191040 .. 3191055 + -11.8   -5.4251   CTAAGTCAGTTAAAA              CCCCGG TTCG CCGGGG               TTTTTTATATCTGCC 100 37
    PAJ_2637 3194046 .. 3194060 +  -7.2  -3.68619   AAGAAAAGATAAAGA               TCAGTA AGT TACTGA               TTTCACTCACTTCAA  67 466
    PAJ_2638 3195448 .. 3195475 + -17.2  -3.40899   ACTGATTTTGGCCCC        TTCCCTTCTTCC GCAG GGAAGAAGGGAA         TTCTCATGCAAAATT 100 36
          CI 3215426 .. 3215457 +  -7.8  -3.01712   AGAATGCGGTACAAC      GCGG-GCCGCCTGCC TCA GGCCGCCCGCTCCGC      TCTTAGCGGCAAGGG  60 92
         tsr 3226656 .. 3226691 + -16.2  -2.65476   TTAATCTTCTCCTTT    TGCCACTGCCGTCAGCC TTT GGCTGGCG-CAGTGGCC    GTTATAATCCCTCAT 100 37
        ycgZ 3230387 .. 3230417 +  -3.2  -3.53444   TAGCGGTTTTCAGAT      GCGCTACGGAGGG CGAGCT CCCCCCTTA-CGC       TTTACGACAACATGC  50 159
        yddU 3237920 .. 3237930 +  -5.4  -4.63527   CATCATGCCCGAAGC                 GATC GTT GATC                 TTTTTGAAGTGATCG  73 407
        ddlA 3241053 .. 3241081 +  -7.4  -2.64616   GTTAATTAATCGCCG       CCAGCGGC-CTGC TCAG GCAACGTCGCTGG        TCATCTCACTGCGCG  56 32
        yfiH 3247161 .. 3247175 +  -2.2  -2.72463   ATGCCATTTCACTTT               TTTTTA ACA TAGAAA               TGGTTGAAGCTAACT  39 130
        fadH 3249225 .. 3249248 +  -5.3  -4.56597   CCAGGCCACCGCACT          GGCGTTAAC GCTTTA GTTAACGCA           TTTTTACGGCGCGCA  73 10
        ygjP 3250989 .. 3251014 +  -6.1  -3.61398   TGGTTTTGGTGAGCG         CCCCCAGGA AACGGCGC TCCTGCGGG          TTATTCAGCACCGGC  58 69
        ygjR 3253952 .. 3253977 + -13.3  -6.20267   CTTACACTGAATAAG         CGGCTGACGTC TTCT GACTTCAGCCG          TTTTTTTATTTTTCA 100 231
         alx 3255006 .. 3255025 +   -15  -3.27704   AAACACAGTGAAAAA            GGGCGGCA GACA TGCCGCCC             TTGCGTTTACAGCGT  93 110
        exuT 3261101 .. 3261120 +   -15  -4.90381   CGTAGCTGATCCTGA            GGGCTGGC CCGT GCCAGCCC             TTTTCTTCTCTTGCC 100 32
        exuR 3262139 .. 3262154 +  -6.2  -3.29511   GGGCTTATCAAATCG              CTGATT TAAC AATCAG               TTCTGGAAGGATCCA  57 206
        yqjA 3262927 .. 3262958 +  -2.3   -4.2558   ACGCCGCGCGAACCA      GCGTGGTGAGGGCT CATGA AACCTTTAC-ACGC      TTTTCCTAAACGCTG  57 7
        yqjB 3263406 .. 3263442 + -12.4  -3.05384   AAACTAAGGCGGGTT   ATCAGCGCACTGCGGAG GGTT CTT-GCAGTGCGCTGAA    TTAAGTCAGGCAACA  81 142
        yqjC 3263835 .. 3263845 +  -2.4  -3.15574   AGCTTAAGAAGTTAC                 AGGC GGA GCCC                 TATTAATCGGATTCA  43 9
        yqjD NONE
        yqjE NONE
        yqjK 3264884 .. 3264903 +  -9.3  -5.75538   CGTTGAATCCCCAAA            GCCAGTC CAGTGC GACTGGC             TTTTTCTTTTTTCAG 100 35
        yqjF 3265516 .. 3265541 + -12.5  -4.73108   ACACCGCTTTTCTGA         CGCACCGGTTG CTTT CTGCCGGTGCG          TTTTGCTTTTATGAG 100 54
    PAJ_2699 NONE
    PAJ_2700 3267319 .. 3267342 +  -6.6  -2.76315   ACAAGGTTATGGATA          TCGCGGGCGG GCGC CTGCCAGTGA           ATTTGGCCATCTTCC  51 333
        yqjG 3269539 .. 3269550 +  -5.8   -2.7169   CGTATTCAGCTTACG                GCTG GACA CAGC                 GTCTTTATCGCCCTT  48 367
        yraM NONE
        yraN 3278256 .. 3278271 +  -3.2  -2.75844   AATCGCTGCTGCAGA              GGCGTT ACCC GATGCC               ATTTCGCGTGCAGCA  43 102
        diaA NONE
        yraP 3279423 .. 3279445 + -11.3  -5.45652   GGCGCAGACAGAAAA          GCCGC-ACCC TGTT GGGTTGCGGC           TTTTTTATTGCGGGT 100 80
        yhaJ 3281538 .. 3281552 +  -7.1  -5.42259   CCTGCGGGGCCAGCA               CGGTG TACAC CACCG               TTTTTTTCGCCGTCA  91 238
        yihV NONE
        yihW 3300944 .. 3300959 + -11.8  -3.36803   GCCCTGAGCAATTAA              CCCCGG CAAG CCGGGG               TTATCGGTAAAATTA  82 34
        yjgA 3303465 .. 3303495 +  -9.6  -4.78237   CTGACCTTTCCGCTG       ATTTGCGGCTGAGC AGC GCCCAGCCGCAGGG       TTTTCTTCTCCCGTC 100 37
         fbp 3306077 .. 3306095 +  -9.5  -4.74103   AGGGCTAAACATCAA             GGGCGCG CGTGA TGCGCCC             TTTTTGCGTTACGAC 100 33
        yeaL 3308784 .. 3308799 +  -3.2  -2.91695   AGGAGCATTCCGAAA              CGCC AAAAAGGG GGCG               TACTTTCACAGTCAG  43 46
         ppa 3309469 .. 3309492 + -12.5  -5.73339   TTCCTTTGTCATACA          TACAGGCCC TGCTAC GGGCCTGTA           TTTTTTTGTCGTTAT 100 100
        ytfL 3319049 .. 3319065 + -15.1  -3.63298   GAGTAGAAACACTAA              GGGCGCC AAC GGCGCCC              TGTTATTTAGTTGAA 100 35
        ytfJ 3320337 .. 3320354 +  -2.6  -3.80625   ATTGGTTGGCCCAAA             GCGCGG ATAGAG CTGTGC              TTTCCCTTCTGCCAC  51 213
        cpdB 3323175 .. 3323193 + -13.1   -4.5442   CAGTAAGAGGGCTAA             GGGCGGC ATCGC GCCGCCC             TTTTATCCTTACAGG 100 35
        ytfB 3324700 .. 3324751 +  -3.6  -5.17786   GGCAGCTTTTTACGG GTAGAATAAGCGATAACCGGTGGC TCAC GTCACCGGCTGTCCGTTATCCCGC TTTTTGATTTTATTG  75 17
         tsr NONE
        yjfO 3330970 .. 3330982 +  -4.7  -3.54424   AGCTGCGATCGAAAT                GGCGG TTA CAGCC                TTTAACGGCGTCAAA  54 232
        yjeS 3350281 .. 3350297 + -10.9  -2.62616   TCGAACTCGCGACCC              CGACCTT GGC AAGGTCG              TGCTCTACCAACTGA  72 398
        engC 3352093 .. 3352118 +  -9.7  -3.44622   CGCATCCCGGCTTTA         TCATTTCCCCG AGGG CGGGGATGTGA          TTGATTCTCCGGGTG  74 80
         psd NONE
        yjeP 3356714 .. 3356732 +   -16   -4.4261   CGGGTTATAAAAAAA             CGCCCGGT CTG ACCGGGCG             TTTTCCTGTTCGGGC 100 31
        argR 3359034 .. 3359047 +  -3.8  -4.79667   ATTACCCATCTGTAG               TGGC ATTTTA GCCA                TTTTTAATAACTTTT  71 342
        yhcN 3359501 .. 3359519 + -10.2  -2.72839   CCTGACAGGTAACCA             GCGGTCCC AAT GCGACCGC             TGGTTAAACATCCTT  69 51
        aaeR 3367702 .. 3367717 + -11.8  -4.24204   CGCAAAAGCTAAAAA              CCCGCC AGTT GGCGGG               TTTTGCGTCTCGGTC  91 29
        yedY 3381565 .. 3381586 +  -2.9  -4.02535   AAAGTCCTGCTACAT           CTGGCGG CTTTCTTA CCGCTGG            TTTACTTGATTATGG  56 74
        yedZ NONE
        aroQ NONE
        accB 3383259 .. 3383269 +  -3.2  -3.41602   GCCGGTAGAATTTGA                 CGAG CCA CTTG                 TTGTCATCGAATAAC  48 1
        accC 3384667 .. 3384683 + -13.7  -5.45802   GCTGAGTCAGTCTGA              GGCCGGA TAT TCCGGCC              TTTTTCTTTTCCCGC 100 48
        yhdT NONE
        panF NONE
        prmA 3387324 .. 3387344 +  -8.9  -3.07005   CAGGTACCAACAGCA            GCCCTGGCG GAT CGGTAGGGC            TGTTAAACATTCGTT  66 55
        dusB NONE
         fis 3389014 .. 3389033 +   -15  -5.38054   TCAGGCCGTTAATCT            CGCCAGCC TCAG GGCTGGCG             TTTTTATTTGTGCCC 100 48
        yhdW 3390605 .. 3390615 +    -4  -3.70919   TCTACGGTGCCCCAG                 CAAA GCT TTTG                 TTATTGAGGTTTAAA  55 69
        yhdX NONE
        yhdY NONE
        yhdZ 3393709 .. 3393737 + -17.5  -3.54424   CCCTCTTATCTCTCC        CCGCATCTTCGTC TAC GACGGAGGTGCGG        TTTCCCCCCATGACG 100 42
        yrdA 3401222 .. 3401237 +  -6.8  -3.15663   TAATGATGAGGGTAA              TGGCGG CACA TCGCCA               TTAATGCCACTCGAT  54 459
         def 3405234 .. 3405258 + -20.1  -3.44622   GGCACGCCAGACTTT          GCAGCGCGTCA TCT TGACGCGCTGC          TTGCTTCTGAGCATC 100 91
         fmt 3406140 .. 3406158 + -13.1  -4.45544   CTGGACTGACCCTCA             GGCCCGG CAAAA CCGGGCC             TTTTGCTTGATGGCA 100 32
        rsmB NONE
        trkA NONE
        mscL 3409403 .. 3409418 +  -7.5  -5.24129   AATTTAAACGACGAA              GCCGC TTCAAC GCGGC               TTTTTTGTGCCCAAA  91 34
        rplR 3416864 .. 3416874 +  -8.2  -3.18912   CTTATAGATGCGCAG                 GCCG GGA CGGC                 TTACTCGCTGAATGC  60 153
        rpsS 3421622 .. 3421633 +  -7.2  -3.51934   GGGGCCAGGATGTAA                CGGC GTTC GCCG                 TCTTTGTACAGAACC  64 252
        tapD 3425121 .. 3425131 +  -5.4  -2.80077   TCATCATATCCCGAC                 TGAC GTA GTCA                 TGAATTTTGTCGGCA  47 140
        slyX 3434210 .. 3434220 +  -4.6   -4.0896   CCTCAAACTTATCGC                 CCGC TAC GTGG                 TTTTCCAGCGCGTTT  61 508
        yheS 3439150 .. 3439172 + -13.5  -3.76167   AACTGGAAGCCATGC           TCACCGCCT GATAA AGGCGGTGA           TGTTTCTTGCTCTTG  93 15
        cytR 3444145 .. 3444173 +  -2.4  -4.34402   GCCAGAAGGGCATGG       GC--GAGACCGGCG CCG CATCGGTCTCCAGC       TTTTCGTATGCGGCG  61 312
        yheT NONE
        yheU NONE
        prkB 3446691 .. 3446715 + -10.7  -2.72463   AACGCATTGAATAAA          ATCAGAGGCCG CGC TGGCCTCTGAA          TAATTACAGCTCGAT  72 27
         crp 3448069 .. 3448100 + -14.6  -3.27382   CGCTAAGCCTGACTG      TTCACGGCGTGATG GCGA CATTATGCCGTGAA       TGTCTTGTGTTGAGC  93 35
        yhfK 3450594 .. 3450606 +  -7.7  -3.21416   GCCAGGCGCCATGGT                TGAGG CTA CCTCA                TTGGTGGTCAGCATG  57 426
        tsgA 3455256 .. 3455266 +  -2.4  -4.13767   CCTGTCTTCTCACCG                 CGTC AAA GCCG                 TTTTCCGCTGGCAGG  56 182
        mrcA 3469595 .. 3469606 +  -2.2  -3.71649   TCTTTAAGTTCCCGA                TCGG CAGC CTGA                 TTTACGGTTTCACCC  51 370
        yrfF 3472411 .. 3472434 +    -6  -2.54193   CTGCAACTGTGCTAC          CCTGTTGC GCTGACAA GCAACGGG           TGAATTGCCATGATG  50 46
        yrfG NONE
        hslR 3473512 .. 3473527 + -10.4  -3.40403   CGGGCGATGAGTAAA              CCGGCT ACTG AGCCGG               TTATCGTCCGCCAAA  75 27
        hslO 3474471 .. 3474489 +  -3.2  -4.49088   TCACTGCTATGCCAT             TAATTTAC TTA GCAAATTA             TCTTTTTTTACTTTC  66 74
        pckA 3476324 .. 3476359 + -16.3   -3.6682   GTCCTCAGCGTTAAT   CA-CAGCGGCGCGG-CT TAAC AGACCGCGCCGCTGCTG    TTTAACTCAGTGCAA 100 27
        yjbE 3479292 .. 3479316 + -10.2  -4.11773   GTCATCGCCGTATAA          GGGTTTTTTA ACAGG TAAAAAACCC          TTTTCCCACCTCTTT  85 92
        greB NONE
        yhgF 3482430 .. 3482453 +   -11  -2.92792   GACGCGGGCGCGGTT          GCAGGTGTGG GGCT TCACGCCTGC           TGCTTTGCACTGGCT  74 166
        ycjM 3484371 .. 3484385 +  -2.1   -3.5627   GCTTCTTCTTGGCAT              CCATCG GCGA CG-TGG               TTTCGGCCGTGGTAT  48 139
        gntX NONE
        yhgI 3486827 .. 3486855 + -18.9  -2.61727   CTTTCTACTGATGTT        TCCGCGCGACAGC CCG GCTGTCGCGCGCA        TCCGTTATCCTGCCT 100 30
        glpD 3495227 .. 3495258 + -15.2  -5.86332   GTCAGCGCTGAAAGC      GCGGTGCAACAGGT TGCG GCCTGTTGTGCCGC       TTTTTTTTGCCTTAG 100 47
        yhgN 3508802 .. 3508819 +  -4.8  -2.64747   GATACAGATGGACAA             GGC-CGC CAGCT GCGCGCC             GTTATAATGCAGTGG  43 256
        yhhY 3513292 .. 3513313 + -17.3   -4.2828   GAAAACATAAGATTA           CGGGCAGCC AAAG GGCTGCCCG            TTTTCATCAGTAACC 100 31
        yhhA 3515904 .. 3515923 +  -4.2  -3.93583   CAGCGCGGCGGCTGC            CTGGGC AATGGCGC GCCCGG             TTTCTGCATCCGTTC  59 367
        yhhK 3526487 .. 3526505 + -11.7  -2.94595   AAAGACAATAAAAAA             GGGCGAC CTGAA GTCGCCC             TGTCTCGTCAGGCTT  78 44
        yhhF NONE
        yhhL 3532398 .. 3532416 +  -9.5  -3.74693   GCGAGGCATCGTTGA             CGGCGGC TTCAC GCCGCTG             TTTGATGAACTGGCG  75 320
        yhhN 3533248 .. 3533262 +  -3.5  -3.72576   GCCACTTTATGATTG               TCCGC TCCCT GTGGA               TTTACTAAGAAAGCG  53 3
        zntA 3535653 .. 3535670 + -14.1  -3.62597   GGATTAACAACCTGA             CGGCGGC AGGT GCCGCCG              TTATTCGCCCATCCC  95 34
        yhhQ 3536843 .. 3536864 + -10.9  -3.44443   ATCTTCTGACAATAC           TCAGGTTGC GTTT GCAGCCTGA            TTCCTGTTGTATAAA  79 75
        dcrB 3537523 .. 3537558 + -13.3  -2.79965   CCGCCCTGAAAACAG    CGAGCCGCGTGGAAA AGCACG TCTCCACACGGCTCG     ATTCTGGTTCTTTTC  85 83
        iolD 3541900 .. 3541916 + -13.7  -4.33203   CAAATACTGATTTCC              GGGCCGT CTG ACGGCCC              TTGTTTCTTCTCTTC 100 31
         idh NONE
        iolE 3543930 .. 3543954 +  -5.6  -3.27475   CCAGGCCCTGTGTAA          GGCTGTGCCC TCATC GGATGCAGCC          TGTTATAGTGGCCAG  54 68
        hexR 3545126 .. 3545147 + -14.5  -5.93809   GTCCTCAGGCTCAAT           GCTGGTCAC TTAG GTGACCAGC            TTTTTTTTATCGGCA 100 173
        yicE 3550039 .. 3550053 +  -4.2  -3.92869   ATGCCCCCTGCCCTT               GATGTC TCC GACAGC               TTTCTCACTGGATCC  57 94
        yhhT 3551457 .. 3551469 +  -2.7  -4.26079   ATGGGCGCTGTCGCG                TTTGT TCC ACAGA                TTTTCCATCATTTCC  61 191
        uxuA 3553776 .. 3553788 +  -7.7  -3.04792   GCCAAATCGCTCATT                GTCCT CGC AGGAC                TATTGCCGCTGCTCC  60 499
         rtn 3555476 .. 3555508 +    -7  -3.15861   GGCGCGCTGATTCAG     CCGTTGCAGC-GTAG GCAT CGACTGCTGCAACAG      TTGCTGGCACTCCTC  60 190
        proP 3557689 .. 3557711 + -14.9  -2.84218   CGAGTAACGCCTCTC           TCTCCCGCC CCTGA GGCGGGAGA           ATCTTTTGCTGCCTC  90 34
        hemB 3558795 .. 3558830 + -16.2  -2.86071   TGCTCTGAGCCATGG    CCCTTCTGCGACGGTG CCTG CACCCTCGCAGAAGGC     GTTATTCCTGTCCGG 100 33
        tetD 3560007 .. 3560019 +  -3.3  -3.85133   GGCACGCCAAACTTT                TCGGC AAA GCGGA                TATTTTCGTCTTTGC  53 493
    PAJ_2976 NONE
        ddpX NONE
        yddS NONE
        yddR NONE
        yddQ NONE
        yddP NONE
        yddO NONE
        dadA 3571302 .. 3571321 +  -2.8  -3.84514   AACCTGCCAGCCATG            CAGCGTCTG CAC CAG-CTCTG            TTTGCTGCTTGCGGT  53 269
        pitA 3574025 .. 3574042 + -12.7   -4.7254   TTCGGCGGCATACCA             GGGCGAC TTCG GTCGCCC              TTTTTAATGCCAGAT 100 41
        uspA 3575424 .. 3575451 +  -3.4  -3.14132   TCTTTGCCAGACGGC        GA-GCCGGTGC CAGCAGT GCGTCGGCATC        TTCATCCGCCCCCAC  46 207
        yhiR 3579326 .. 3579350 +  -7.8  -2.62616   GCCTTTCCCGTTTAG          CGTCGCCG GTTCAGTTA CGGCGGCG          TGATATCGCAGGTCA  58 42
    PAJ_2991 3580336 .. 3580359 +  -4.6  -3.05384   CACCGGCCTGCTTTG          CTACTGTAGCG GCC TGC-ACGGTAG          TTGAGTGACCGCGCC  47 175
         gor 3582599 .. 3582637 + -10.9  -2.53995   TTGCGCGCATAACGT  AGC-GCTGCCCGCTGACC CTGT GATCTGCGGGCAGCAGCC   TCAATTAAAATAGGT  72 46
        suhB 3585098 .. 3585108 +  -6.8  -3.34344   TACAGCAAATTATTA                 TGCG TCT CGCA                 TTAATTAAGAAGTCC  59 282
       cysA2 3586209 .. 3586225 +  -3.7  -3.13403   CGCCAGACAAGATCC              GCTTTTT ACG GGAAAGC              TATTCATGAAAACGC  46 0
        potH NONE
        potC 3587928 .. 3587938 +  -3.2  -3.54638   TCCTTTGCAGGAAAA                 GGCT GAC AGTC                 TTTAACACGCGTTAT  50 20
    PAJ_2999 NONE
        ugpQ NONE
        ompF 3591192 .. 3591207 + -11.8  -5.42259   CGCTCATTTAGCGAG              GCCGGC AAAT GCCGGC               TTTTTTTACGCCTGC 100 86
        ptxR 3596408 .. 3596420 +  -4.8  -5.46706   CGTCCAGGGGGTTGC                CGTC GATCA GACG                TTTTTCTTTTCCGCT  85 81
        msbA 3608106 .. 3608120 +  -4.2  -3.57144   TGGCGAAATCCATCC               CCTGAT AAA AACAGG               TTTCGAAGTGAAGCC  54 249
        ypfH 3609792 .. 3609805 +  -2.3  -2.74144   GCTTGCAGGACTAAA               CAGCA GACA TGCCG                GTTTGGCCCTCAGGC  39 27
        crcB 3610545 .. 3610559 +  -9.2  -3.76492   ATGGTGACCTGCCAG               CGGCCT TAA GGGCCG               TTTAATGCCCTTCAC  74 282
        yeiK 3611559 .. 3611584 +  -4.7  -2.84602   GGCTCCTGTCATCCA         CCGTTAGCGAT CAAA ATCGATAACGC          CTTTAATCAACTCAC  47 56
        yjjM NONE
        yjjL NONE
         mqo 3622205 .. 3622234 + -10.1  -2.87931   GCAGCTCGCAAAACA       TCATCGCTACG TGCGCATT CGTGGCGATGA        TGTGTCGGAAATCCA  71 47
        yjiR 3624770 .. 3624781 +  -3.6  -3.19192   GACATAAACGCATAG                CGCC ATGA GGTG                 TTAAGTTCCGTCGAC  46 290
        aes1 3626208 .. 3626237 +  -3.5  -4.46212   CCACCCGGCCCAGGG       CGGTTAATGCGGC GATA GTGTCATTGACCG        TTTTATCATCGCGCA  66 184
        yhjC NONE
        yhjD 3629055 .. 3629069 +  -2.8  -3.55444   TGCGTCACTTAACGC               TGCC ATTCTCC GGCA               TTTAACACATCACAA  49 160
        yhjE 3630556 .. 3630571 + -11.8  -5.42265   GCTAAAGATACTCAA              CCCGGC TCAG GCCGGG               TTTTTTATCGTTTCC 100 52
        aapJ NONE
    PAJ_3036 NONE
    PAJ_3037 NONE
        bacC NONE
       argH2 3636319 .. 3636333 +  -8.6  -4.40561   ACTACGCTCTTTACC               TTACGC CAG GCGTAA               TTATTTTTGAGCCGC  80 11
        setB 3637674 .. 3637697 + -19.6   -4.7173   CTTAATACATAAAAA          GGGCGCAGCC AGAT GGCTGCGCCC           TTTTTGCATGTGCTG 100 78
        ilvY NONE
        yifB 3648871 .. 3648897 +   -10  -2.71731   CGCTCTTCTTCTGTC         GCTGGCTCACGC TTG GCGAGGTCCAGC         TCATTAAACGCTACG  62 230
        hdfR 3650055 .. 3650074 +  -6.4  -5.24799   GCAGGCAAAAAAAAA            TCCTTCGC CGAA GCAAAGGA             TTTTTCTCTTTCTGG  91 106
        trmA 3660386 .. 3660405 + -13.6  -4.86621   TAAAGCGTAAAAAAA            CGGGAACC TGAA GGTTCCCG             TTTTTAATTACCGAT 100 38
        sthA 3663445 .. 3663468 +  -2.3  -4.41348   TCGGCTCATCAAACA          GCGGGACCT CGATAA AGGCTTCGC           TTTCTTTCACCAACG  63 448
        argE 3670139 .. 3670154 +  -7.5  -2.87051   TTAACAGCAAAATGC              CCCGC CATTCT GCGGG               ATTTGATAATAAGAA  57 69
         ppc 3673112 .. 3673135 +  -8.8  -2.71011   CCATTCTCGTCAGGA          CGGTCCGCTCA GCC TGTGCGG-CCG          TCCTTAACCCACCCT  61 43
         tsr 3675150 .. 3675167 +  -8.4  -5.61596   ATGAGACATTCAGAA             CCGACG CGGACA CGTCGG              TTTTTTTATGGCCAT 100 84
        metJ 3680495 .. 3680510 + -10.4  -5.06414   TCAGACATAAAAAAA              CCCAGC CTGA GCTGGG               TTTTTCTTGCCGCCG 100 44
        priA 3683255 .. 3683291 +  -2.2  -3.94812   TGCAAATTAAGTAAC    GGCCCGGCATCG CAATCGATAACAA TGGTGCCTGGCC    TGTTTTTACCTCAGA  52 95
        cytR 3684388 .. 3684401 +  -2.3  -3.64488   AAGGATGAGAGATAA               GCGAA AAGT TCCGC                TATTTTCAGGGGATT  50 26
        ftsN NONE
        hslV NONE
        hslU 3687481 .. 3687501 + -14.7  -5.28176   ATGTGCTGTATCAAA            GCCCGGCCA GTT TGGCTGGGC            TTTTTTCTGCATGCG 100 54
        rraA 3688116 .. 3688132 + -13.7  -4.68506   GTCAGCAAACGAAAA              CGGGTGC CAG GCACCCG              TTTTTCGCATTAGTT 100 42
        glpF NONE
        glpK NONE
        glpX 3692474 .. 3692485 +  -5.8  -3.14132   GTAACCCCCCAATCA                GTGC GCCC GCAC                 TTCCTGCGAGCCAAG  52 194
         fpr NONE
        yiiQ 3695699 .. 3695709 +  -2.4  -3.88766   GACAACGTTGCCCCG                 GGGC AGC GCCA                 TTTCATGTATCGCGT  52 105
        tpiA 3696530 .. 3696547 + -12.7  -5.66684   TTGAGCACAGCATAA             GCGGCCT CATC AGGCCGC              TTTTTTTATGGGTTG 100 48
        cpxR NONE
        cpxA 3704602 .. 3704621 + -12.8  -3.51825   AATTTGCTATGCTTC            GGCCCTCG TTAT CGGGGGCC             TTATGCTTAACATCG  89 39
        yibK 3705337 .. 3705353 +  -2.1  -4.62069   TTCACGAATTTTCGG              ATGGCGG TCG CCGCTGG              TTTTTCCGGTGCCGC  65 265
        yibP 3709844 .. 3709856 +  -4.1  -3.63627   CCGCTAAGCTCGCCA                TCGTC ATT GATGA                TTTCGGCTATCGACC  55 108
        yibQ 3710797 .. 3710809 +  -3.3  -3.72695   ATCACCTTTCCAGAC                TGCCC CGA GCGCA                TTTCATCAAAACCCT  53 149
        hldD NONE
        rfaF NONE
        rfaC NONE
        wcaL NONE
        rfaL NONE
        yibD 3719602 .. 3719616 + -11.4   -5.7946   GAAGCGAATCAGTGA               CGGCAC CGA GTGCCG               TTTTTTTCTTCAGGG 100 26
        rfaB 3722024 .. 3722067 +  -2.3  -4.16921   GCTCATAGCATCAAT C-AGTCGTTCCCATGAACCG ATAAG CAGATCAAGGGAACGGCACG TTTTAAGCGTTGTTC  57 54
        yibD 3724388 .. 3724407 +  -3.4  -2.82327   TTTGCCCTACAATCG            GCTCACTG AATT CTGAGAGC             ATTTGAGTATGACAA  43 71
        rfaQ NONE
        rfaG NONE
        kdtA NONE
        kdtX NONE
        coaD 3729226 .. 3729237 +  -5.8  -3.37017   CCACCAGGCTCTGCT                GGCA AAAC TGCC                 TTAGTGTTGACAGTT  57 10
       coaBC NONE
         dut 3733319 .. 3733329 +  -4.6  -4.28188   CATTTTATTTCTCAT                 CGCC ATA GGTG                 TTTATCTTGTGGCTG  64 71
        slmA 3733997 .. 3734013 + -15.1  -2.78384   CTGGTGTAACAGGCA              GGCGGGC AGC GCCCGCC              TGTAATCAGACGCCG  95 32
        nupC 3736772 .. 3736789 + -14.1  -3.16564   TATCTGATCATCTTA             CGGCGGC CTGG GCCGCCG              TTAATGGCATCAGAA  90 34
        yicC 3738296 .. 3738310 +   -10  -4.86822   ATAACAATAATAAAA               CCCGTA ATT TACGGG               TTTTATTGTCTCATT 100 67
    PAJ_3131 3738927 .. 3738944 + -10.5  -5.03715   AAATAACACCCCTCA             GTCCGGC ACCT GCCGGGC              TTTTTTACGCCTGCT 100 35
    PAJ_3132 NONE
    PAJ_3133 NONE
    PAJ_3134 3743156 .. 3743167 +  -5.8  -3.76968   AGTAATAGCTAATTT                CGCT TTAT AGCG                 TTTACTACGTCACTT  61 445
         ddg 3745628 .. 3745643 + -10.4  -4.32046   ACGTATAAAGACAAA              GCAGGC TCTG GCCTGC               TTTACTTTTTCAGGC  90 33
        wzxC 3747085 .. 3747103 + -10.3  -5.40072   GAAAAAAGGGCTTCA             CGTGCTG CCAGT CAGCACG             TTTTTTTGAGAACAC 100 66
        yicG 3748284 .. 3748296 +  -6.9  -4.07568   CTCTTTATCGGCCAG                GGCGC GAA GTGCC                TTTTGGGGCAACGCG  68 191
         gmk 3750662 .. 3750677 +  -3.3  -2.78816   CAAACTGTTGGCAGT              CTGAA CCCAGT TTCAG               TATGATGCCGAGTCA  43 22
        rpoZ 3751165 .. 3751178 +  -3.1  -3.29144   CATCACCCATCCTGT               TGCAG TAGC CTGTA                TTCTGGCAGAAATGA  47 195
        spoT NONE
        trmH NONE
        recG 3755920 .. 3755931 +  -4.4  -4.19735   CACTTTTTTTGCCAC                CGTT AGCA AACG                 TTTGCTTTTGAGCCG  62 41
        yicE 3757369 .. 3757386 + -12.7  -2.91255   GAAAAGTCGTTTTAA             GGCAGGC TGCG GCCTGCC              TGCTATTTATGCTGA  81 26
        yicH 3759164 .. 3759190 + -14.5  -3.95584   AGGTGAGGTAAAACA        C-ACAGGGCCGC AATC GCGGCCCTGTCG         TTTAATTGATGCGCG 100 30
        glnA 3766083 .. 3766100 + -11.3  -5.24129   GCCGTGGAAACTTTA             GCCCATC TTCG GATGGGC              TTTTTTCTCCGCGAA 100 116
        ntrB NONE
        ntrC 3768663 .. 3768688 + -14.7  -5.36441   AATAAGAAATCCACT         GCCGGAACAGC GCAG GCTGCTCCGGC          TTTTTTATATGACGC 100 36
        engB 3772177 .. 3772206 + -10.1  -4.35327   TTTACCTGATTTTTT       GTGAGCAACAAAG GTTT TTTTGTTGCTCTC        TTTCATTTTTAGTCA  90 195
        mobA NONE
        mobB 3778938 .. 3778975 + -14.3    -4.015   TGCCAGATCGCAGAC   GTAAAAAAGCCCTGAAC GTCA GTTCAGGGCTTCTTCAC    TTGTTTGATGCCTGG 100 291
        yieO 3786367 .. 3786401 +  -4.3  -3.53012   AACGCCAACCGCCAT    CGC-GTCGT-TGCTGGT AAA AACAGCATGCGGCGGCG    TTTCCAGCGCCAGCA  52 271
    PAJ_3171 3791926 .. 3791939 +  -6.7  -3.57387   TTTTTCCACTCCAGA               GCGAA ACGT TTCGC                TTTCAGGAGTGTATT  61 58
        qseB NONE
        qseC 3794658 .. 3794685 + -12.1   -3.7108   GCTGCACTGGTGAAA        C-GCTGTGCCTG ACAGG CAGGCACAGCCG        TTTAAATCTCGACCT  88 28
        yieN NONE
        yieM 3799788 .. 3799805 +  -2.1  -3.98661   GCGCTAAGCGAGACA             GCAGAAAT TCC ATTT-TGC             TTTATAGTAAATATC  55 34
       sumf2 3801981 .. 3802039 + -13.9  -4.25256   CAGGTCACTCTGTGG CGTAAACGTTAAGGCAACCGGCAGCGGC TTAT GCCGCTGCCGGT-GTGTTGCCAGTTACG TTATTTTGCTGCACA 100 14
        asnC 3802658 .. 3802669 +  -3.6  -3.14564   CCTTGTTTTCCACAG                GTGG ATCA CCGC                 TTGATCACAGCGTAC  46 125
        mioC 3803209 .. 3803219 +  -2.4  -4.21317   AAGATACTGTTTTTC                 CCCG GAT CTGG                 TCTTTTATTTTGTGG  57 80
        gidA 3805472 .. 3805492 +  -3.1  -3.04398   TGCTGCGCAAAAGCG            CCTGATCTG AAC CGGGGCGGG            ATTTTCCGCCCCCGC  43 21
        gidB 3806271 .. 3806289 +  -3.2  -4.02396   CTGACGCGGAAATTA             TCTGAAAA ACT TTTTCACA             TTTAACTTTTATTTC  58 146
        atpI NONE
        atpB NONE
        atpE 3808341 .. 3808376 +  -8.4  -3.41126   GTCGCCTAAAGCCCC    TGTGTTCACTC-CGTAC CTG GTGCGAGAGTGAACGGA    TTCTGCCGTTTATCG  66 32
        atpF NONE
        atpH NONE
        atpA 3811014 .. 3811049 +   -14  -3.53224   CCCAGTCCTGGTAAT    GTCTGGCGGCTTGTCT GAAA GGGCAAGCCGCAAGGC     TTTGAGGAGAAGCTA  93 27
        atpG 3811912 .. 3811925 +  -3.1  -2.73635   TTACCGAGATCGTCT               CG-GGA GCC TCCGCG               GTTTAACCAGGTTTG  41 6
        atpD 3813354 .. 3813365 +  -2.2  -3.53012   GAAAAAGCGAAGAAA                CTGT AATA ACGG                 TTTCCCAGGAGGAAA  47 20
        atpC 3813826 .. 3813846 + -13.3  -5.81412   TTGTGCGTCACGAAA            TGCCAGCCC ATT GGGTTGGCA            TTTTTTTTGCGTGGC 100 48
        glmU 3815419 .. 3815431 +  -3.3  -2.62184   GGGGAACCGGCAAAG                CCGGA CTA TCAGG                TCATATGACAACGCA  42 109
        glmS 3817313 .. 3817350 + -11.3  -4.67692   CGGTCGAGTAAAGCC   TCTCACGCGTGAATCCC ACCA GGGATTCACGCGTTCCA    TTTATTTGATTTTGC 100 30
        pstS 3818993 .. 3819017 + -12.2   -2.5955   CAGTCTGGTCAGCCT         TCAGGGGCGGC GTCT GCCGCCC-TGA          TAACTTCTGAGGACT  78 63
        pstC NONE
        pstA 3820899 .. 3820915 +  -5.8  -2.52464   ACGGTTAACTACCGA              CACTGC CCTGT GCGGTG              TCGATTAAGAGAGAA  50 33
        pstB 3821630 .. 3821640 +  -4.6  -2.90496   AAGACTACATCACAG                 GTCG CTA CGGC                 TGATTTGACAGGAGA  47 12
        phoU 3822400 .. 3822435 +  -8.3  -3.24924   AACCTTCTTGATTCT    G-CACAACCGTGTGCT ATTCA GGCGCACGGTTGCGGC    TATTCTGCATAGACC  64 30
        yjhB 3823765 .. 3823785 +  -8.2  -3.68351   CCTGACTAATGTAAA            CCGGCCTC ACAAA GAAGCCGG            TTTACGTGGTGAGCC  71 45
        xylF NONE
        xylG NONE
        xylH NONE
        xylR 3832390 .. 3832407 +    -7  -3.14051   CCGTCTCACTTCTGC             GCATCG GCTTGA CGATGC              TCTTAGTGAAGATGC  60 259
        hpa4 NONE
    PAJ_3209 3834400 .. 3834411 +  -5.8  -4.71828   CACGATTCAGTTTGA                TCGC TGCC GCGA                 TTTTGTTAATGAAAT  78 26
        yneA 3835737 .. 3835779 +  -5.5  -3.33661   AATTCTCACCATCAA TGCTGATGCTGGCCAGGTTC AACA GAACCCGGCCAGT-TCCCCG TATTCTGATTAGGTA  54 39
        rbsA 3837285 .. 3837303 +  -2.3  -4.63218   AAAGGAGGCAGTAAA             TGCGTGA TTTCC TCCCGCG             TTTTATTCACACCCA  63 19
        rbsC 3839300 .. 3839322 +    -4  -2.80077   AGCTCCGCAATAAAG           CGCCTGCTGT CAC ACGAAAGGCG           TAAGTTTTGTAAACC  45 0
        rpiR NONE
    PAJ_3214 3841134 .. 3841146 +  -9.1  -2.91912   AAGGAGAGGATACGA                GCCAG CGC CTGGC                TGTCTGACTGGGTCA  61 376
        pilJ 3846147 .. 3846178 + -10.8  -4.14511   CGTAGTTTTTGTTAT      GCCGGATCGCCTGT TTGC ACGGGCGATCCCCC       TTTTGACCTGCCGTT  87 36
        ybhD 3847693 .. 3847704 +  -2.2  -4.60041   GCGTGAACCTGGTTT                GATC CACC GGTC                 TTTTTCCAGCTGACT  65 516
        ccpA 3856284 .. 3856324 +    -9  -3.39895   TTAGGCGCGCTGTCG CGGTTGTGCCAG-GTCAGC CCTG GCTGACGCTGGGCCAGCTG  TTGATTAATGGCAGG  66 318
         tag 3860149 .. 3860167 +  -4.6  -3.61356   CATCAAACCAACTGC             TTTTGTCA TCC TGACAACA             TTTAACGTCGATCCT  55 2
        yiaD 3860988 .. 3861007 +  -2.8  -4.30844   GGCAAAGTCAGACTC            GCTGTC CTTTTTTC GACGGC             TTTTGGTAATAAAAT  59 63
        rafR 3862108 .. 3862122 +  -6.4  -2.84634   AACGCGAACGTTTTT               GCCATG TTG TATGGC               TGTGGTAGTCTCGCG  54 39
        kdgR 3863264 .. 3863277 +  -5.3  -3.82067   TTTGCTACTTTGCTT               TGGAA CCGG TTCCA                TTTAACGTTTTTATA  61 101
    PAJ_3235 NONE
        kdgK NONE
        ttuB 3866377 .. 3866398 +  -9.4  -2.80821   CGTTAGCCTCTTCTC           CGGGCGAC CTTAGC GTTGCCCG            TCATCTATTTACAGG  65 50
        tkrA 3867412 .. 3867442 + -14.7  -2.85061   AATCCCCACGGCTTT       CCATTGCGCCCGC CGGGA GCGGGCGTTATGG       TGGTTCTCCCATTAT  90 39
        avtA 3868813 .. 3868825 +  -2.6  -4.00465   AACCTGATATTGAGG                GGCT GCCGA GGCC                TGTTTTTGCATTATC  56 107
        eamA 3869821 .. 3869855 +  -6.5  -4.64157   TCTAAAGTATCAGGC    TGAGGTTGCAGGCCTC TGAC GAG-CATACAACCTCA     TTTTCTGATTGTTTA  77 36
        yfcI 3872382 .. 3872407 + -16.2  -4.11394   CGTATCCATAAAAAA         CGGCCACAGC ACGTAG GCTGTGGCCG          TTTTCAAAATGACGT 100 155
        yidQ 3873548 .. 3873582 +  -9.3  -2.77235   AAGGCAATCTGCTTC    CCGTCTGGTGA-CCAG ACGA CCGCATCACCAGACGG     TGCTTCACTGCTTCG  60 73
    PAJ_3246 3875807 .. 3875824 + -11.3  -4.60797   TCGGGCAAAAAAAAA             CCCTTCC GGTG GGAAGGG              TTTTGTCTGTCGCAG 100 299
        rpmH 3882727 .. 3882740 +  -2.3  -3.93695   TCGTGCTAAAGGCCG               CGCTC GTCT GACCG                TTTCTAAGTAATAAA  52 32
        rnpA 3883131 .. 3883159 +  -3.9  -2.56596   CGGTTCCTGATCGTC       CTGAT-ACGCGT CTATCA ACGCGGCATCAG        TCCATTACTGGGGCC  44 31
        yidC 3885039 .. 3885057 + -11.7   -5.1471   ATACGGTTATGCTCA             GGCGGTC AAAGC GACCGCC             TTTGTTTTTTGTAGT 100 69
        trmE 3886455 .. 3886512 +    -7  -2.79008   CGGCAAATAACACTG CAC-ATGGCCCGTAAGCGGC-CCGGT AAAACGAA GCCGTCGCCGTTTACGGGCCAACGCG TCATGTGTTGCTTAT  57 31
        ycdI 3887287 .. 3887313 + -10.9  -2.99273   TCGTCTGATATCCCA         GCGCGTTACGA CTTTT TCGTAACGCCC         GTTTCTGCTGGTGAC  74 33
        yieE 3888242 .. 3888257 +  -2.5  -3.04398   CCAGGGCGCTCAGTG              TGCGT CGATAA ACGCG               ATTTTAAGCACAAAC  42 71
        yieH 3890744 .. 3890760 +  -5.7  -2.51535   AGGCCAAGACCGCCA              GCGCAGT TAC GCCGCGC              CTGTCTGTTTCCATG  48 408
        glyQ NONE
        glyS 3894654 .. 3894671 + -11.3  -5.62045   CGACGATGTTGAAAA             GGGACGA GAAA TCGTCCC              TTTTTTATTCTGTGT 100 48
        pagC 3896766 .. 3896782 +  -6.6  -2.71364   CTGATTGCACGTTTA              TGCAGA TTTGC TCTGCA              TCCTTCGCGGCGTGC  53 37
        fdhD 3899768 .. 3899799 +  -3.7  -4.13945   GTTATCAGGCCGTCA     CGGGCT-CGCTGACTG CGC CTG-C-GCGAAGCCCG     TTTTGCGGTCAGCAT  60 76
        sodA 3900619 .. 3900640 + -14.5  -5.78622   ACCCAAGAGACCTGA           CCGGCAGAA CCTG TTCTGCCGG            TTTTTTTTCGCCTGA 100 47
        ybjX 3902062 .. 3902076 +  -4.2  -4.66833   AATTTCGCGGCTGAA               CGGCAA TTT TTGCAG               TTTTTGCGCTTCCAG  71 183
        yiaG 3908659 .. 3908683 + -12.2  -3.09015   CCCGGCTTTTGTTGG         C-GCCGGTCAC GTGA GTGACCGGCCG          TTCAATACCTCTCCC  81 56
        ohrR 3913883 .. 3913905 +  -3.4  -3.06492   CCTATCCCCAATGGT           TTCGGTATTG AAG CAACGCTGAA           TATTCACCTGCCTGA  45 401
        yhjW 3916194 .. 3916211 +  -9.9  -5.78622   ACCATATTTAAGAAA             CCTGTCT GCAA AGACAGG              TTTTTTTTCGCCTGA 100 238
        dppA 3918879 .. 3918902 + -16.8  -3.16564   GGTTTTTTCGGCCCT          CAGGCGATCG CCAC CGATCGCCTG           TTGCCTGCTCTTTTT 100 67
        dppB 3920064 .. 3920074 +  -3.2  -3.44284   CACAAGAAATAAGGG                 GGCA TCA TGTC                 TGTTGTTGATCCCGC  48 29
        dppC NONE
        dppD NONE
        dppF 3923344 .. 3923356 +  -2.7  -5.41143   TCTACTGTAGCAGGA                TGAAG TCG CTTTA                TTTTTTTACCCCGTG  80 380
    PAJ_3287 NONE
        yhjQ 3925220 .. 3925234 + -11.4  -3.53091   TATTAAATGTAATGA               CCTGGC CAG GCCAGG               TTTAAAAAAACAGCT  83 35
        bcsA NONE
       acsAB NONE
        bscS 3934327 .. 3934342 +  -5.4  -4.43501   GGCGGCATTGAGCGC              CATCCT GGCG GGGATG               TTTTCTGGCTGGCTT  69 360
        celY 3935513 .. 3935524 +  -2.2  -5.20534   TGAGGGGATGCTGCT                GAGG CAAC TCTC                 TTTTTGTTACTTCCT  76 86
        yhjK 3937888 .. 3937898 +    -4   -3.3579   CGTTAGTGGATACCT                 GTTT ATG AAAC                 TATTTAAAAGCCTTT  50 246
        dctA 3939204 .. 3939234 +   -17  -3.68351   TTTAATCCTCTCAAA       TGCCCGCTGTCA CTTGCCC TGACAGCGGGCA       TTTGGATAATAAACC 100 54
        yhjJ 3940925 .. 3940938 +  -6.7  -4.62069   CAGCGCCACCGACCT               CCTGA TCCA TCAGG                TTTTTGCCCTGAGCC  77 21
        yhjH NONE
        yhjG 3946873 .. 3946922 + -10.7  -3.85698   ATGTGATAACCAAAA GCGGTTTTCACCGGCCCGA AAGGTTGTAGCA ACGGGCAGGTGAATACCGC TTTATCAAAAGCCGC  77 66
         rep 3949508 .. 3949534 +  -7.9  -4.68384   AGCAGACGGCACAAA        CGCTCGGCCAGC CTCG GC-GGCAGGGCG         TTTTGTTGCGTGAGT  83 250
        trxA 3952541 .. 3952586 + -13.3  -3.06991   CTGGCGTAATCGGGC CGGGCGTCCGGCAGTGGTTAA ATTT TTGCCTGCTGCTGGACGTTCG CTTTTAAGCGTGCTA  86 32
         rho 3954146 .. 3954166 +  -7.6  -5.72207   CTTGATCCTGTAGAG            CGTCATCT GAGCA AGATGGCG            TTTTTTTACTTTAAA 100 36
        wecA NONE
        wzzE NONE
        wecB NONE
        wecC NONE
        rffG 3960057 .. 3960069 +  -3.4  -2.61264   AACAAAAGGAGCAGA                GATG AAAGG CATC                ATTCTCGCTGGCGGC  42 43
       rmlA2 NONE
        rffC NONE
        rffA NONE
        wzxE NONE
        wecF NONE
        wzyE NONE
        wecG 3967162 .. 3967178 + -10.9  -2.71011   GTTATCACTGGCGTG              GCGATCT GTA AGATCGC              TGATTAACGCCAGGT  72 15
        cyaA NONE
        yifL NONE
        dapF NONE
        yigA 3977422 .. 3977436 +  -3.5  -3.01712   GAACGCTGGGTGGAG              CGC-GC ATGA GCAGCG               TGTTGCAGGAGACCG  45 17
        xerC NONE
        yigB NONE
        uvrD 3981380 .. 3981417 +    -2  -3.29144   GGTTTTCAGGAATAA   CATCTAAGGCTATC TCATTACGCT GGTAGCCTTAGCGG    TTATCAGCGACCTCC  45 143
        corA 3982518 .. 3982535 +  -9.1   -3.1582   TTTAATCATCAGCAC             GGGCTGT TAAT ACGGCCC              ATTTTGCTGGCCTGC  67 36
        abrB 3983999 .. 3984015 +  -2.1  -3.43445   CTATCAGCATGCCGC              TCTGGGC ATC GACCTGA              ATTTTCTTCCTCATC  46 367
    PAJ_3334 3985748 .. 3985777 + -12.9  -3.27164   ATTCAGGCAGGATAA       CGCGTGGCAGT ACTCAAAC GCTGCCACGCG        TTCAGTTCTGTGATC  87 40
        pldA 3987189 .. 3987225 +    -3  -4.56775   GTTACGGCGGCGCTA   CGC-TGGGCTGGAGTTAT CCC ATCAC-CCAGCACGTGCG   TTTTTACACCCAGCT  65 82
        recQ NONE
        rhtC 3990235 .. 3990247 +  -7.7  -3.05384   GGTCAATCGCGCCCG                CAGTG CGC CACTG                TTGGATGCCCAACCA  57 446
        pldB NONE
        yigL 3992704 .. 3992720 +  -9.3  -5.00616   AGCCCGGTAAAGCCC              GCGGCCG TCC CGGCGGC              TTTTTTCGGCGCCAG  90 253
        yigM 3995156 .. 3995207 + -22.4  -4.05446   CTGTGAACGCCCCTG AGC-CTGACCGGAAGCAGACCGCAT GAC AGGCGGGCTGCTTCCGGTCAGAGCG TTTCTGATTAAGCGG 100 112
        metE 3999142 .. 3999159 + -14.1  -5.10497   CGTTGTCAGTATGTT             GGGGCGC CTGA GCGCCCC              TTTTTTCAGTCACTT 100 62
         udp 4001087 .. 4001110 + -18.2  -2.79183   TCCCCTGTTTTAACA          GACAGGCCCG TGAT CGGGCCTGTC           TGTCCTGCCACTCAC 100 42
        rmuC NONE
        ubiE NONE
        yigP NONE
        ubiB 4005854 .. 4005869 +  -3.2  -3.79747   TGTCGCTGATTCGGA              CCCG AATAAACA CGGG               TTTCGTGGTGCATGA  55 68
        tatA 4006219 .. 4006233 +  -2.8  -3.61398   TGGTATTGGTGTTCG               TGATCG GGC TGATCG               TTCTTGGCCCGCAAC  49 69
        tatB NONE
        tatC 4007610 .. 4007635 + -16.3  -3.69332   GCGGGAGAGGAAAGT         CAAAAACCGCC GCCA GGCGGTTTTTG          TTTAGGGTGTTATTG 100 66
        tatD 4008579 .. 4008601 + -12.1  -4.12942   CCTCGAACGTGCCTT           CGGTGATGA TCACT TCATCACCG           TTTTGCGGCGTTTCG  87 153
        ubiD NONE
         fre 4011443 .. 4011457 +  -3.5  -4.17516   GAATCACAGATGTAT               GGCGA TGCCT TTGCC               TTTATCTGATTTCGC  60 2
        pepQ 4016402 .. 4016416 +  -3.5  -3.95022   GCGCGACCTGCATCT               TGCCT GATGG AGGCG               TTTGATATTCCTGCG  55 19
        yigZ NONE
        trkH NONE
        hemG 4019285 .. 4019297 +  -6.2   -3.0497   GCCACCTCGCGACAG                GCGG TTAAC CCGC                TGTTCGCACTGCTCT  53 247
        murB NONE
        birA 4026882 .. 4026899 +  -9.1  -3.86524   GAAAAATAAAATAAA             GCCTGCT TTTT GGCAGGC              TTTATCGCCACCTGT  76 39
        tufA 4030860 .. 4030877 + -11.3  -4.87273   CAATGCACGTGGAAA             GGGCATC ATTT GATGCCC              TTTTTGTACGCTGTT 100 60
        secE NONE
        nusG 4032019 .. 4032047 + -13.3  -5.35224   TTGGCTGTTGCAGCA        GGCGCGAAATT TAACTAT AATTTCGCGCC        TTTTGTTTTTATGCG 100 59
        rplK NONE
        rplA 4033284 .. 4033316 + -10.6  -3.85209   AATTGCTACTTGAAA      CGGGCGAAAAATTC ACCTA GAATCTTACGCCCG      TTGTTCTGCATTAAT  82 39
        rplJ 4034183 .. 4034197 +  -3.4  -3.93768   CGCGATGCAAAAGAA               GCGGCT TAA GGCCTC               TCTTTTCTTCGCACT  55 17
        rplL 4034658 .. 4034683 + -15.5  -4.62069   TAGTTTCAGACTGAT         GGCTGGTGACT TTTT GGTCACCAGCC          TTTTTGCGCTCCAGG 100 66
        rpoB NONE
        rpoC 4043341 .. 4043356 + -10.4  -6.38655   ACGCCTGATAAAAAA              CCCTGC TCTG GCAGGG               TTTTTTTTTATCTTT 100 48
        yjiR 4045299 .. 4045310 +  -7.2    -3.695   GCCGTAATACTCATT                GCCG TGCG CGGC                 TTTCCACTCTTTAAC  67 69
        nudC 4049759 .. 4049780 +  -5.9  -3.14132   CTGCCGCGCTGAGGC           GTGAG-AGTG CTA CACTACTCGC           TTGATACCGAGAGAG  55 22
        hemE NONE
         nfi NONE
        yjaG 4052316 .. 4052328 +  -4.7  -4.18494   TGCAGGCTGAAGAGT                GCCCG AAG CTGGC                TTTTCCCTCGCACTC  64 147
        hupA 4052686 .. 4052701 + -11.8  -4.86731   TAACGTTTTAAAACA              GGGGCG ATTT CGCCCC               TTTTGTTTAGGGGCC 100 56
        yjaH 4053398 .. 4053414 + -13.7  -3.90738   CTGAGGCAATAAAAA              GGGGCAC TGG GTGCCCC              TTTGATCATTATTTA  95 37
        fecB NONE
        modA 4065282 .. 4065299 +  -2.6  -3.98952   GTTTTCTGTCCCTCA             GCCAGT GACAGA ACAGGC              TTTCAATTTCTTTTC  56 18
        metA 4066422 .. 4066445 +  -9.6  -5.92337   TTAGCGACAACTGAA          CCGTGTTAGCC GCT GGC-AGCACGG          TTTTTTTTCGTCTGT 100 48
        aceB 4068237 .. 4068252 +  -4.6  -3.09933   TCCTTTCTGACTCTG              CCAGGC TACC GCCTGC               TTCCCTGACTTAAGG  50 2
        aceA 4069596 .. 4069620 +  -9.9  -4.58395   TTGAGTCTGTGTCTT          TCCCGCCCG GCATCTG CGGGCGGGC          TTTTTCAGGAGTGAA  91 42
        aceK 4071479 .. 4071490 +  -5.8  -3.76413   AACATTGGAAAACTC                CAGC AGGC GCTG                 TTTCACGTTTTCAAG  61 61
        yfeW 4077112 .. 4077125 +  -4.5  -4.30987   TAGGGCGGCGCTGGC               CAGTC CACA GGCTG                TTTCTTATAAAGGCT  64 74
        metH 4081912 .. 4081933 + -10.1  -5.26875   GCCGACTAAAAAAAC           AAGGCAGCC TGAT GGCTGCCTC            TTTTTTAGTTAAACC 100 32
        lysC 4090150 .. 4090166 + -11.5  -4.56597   CGCCACTGGGTTAAA              GCCGGGC TCT GTCCGGC              TTTTTCACGACAGGC 100 50
     slc10A2 4091189 .. 4091208 + -12.8  -2.56715   GTACAACCGACATCA            CGGGGGCC GTAT GGCCCCTG             TAAATTAATCCCCGT  81 51
        psiE 4095078 .. 4095091 +  -2.3  -3.33261   AGTAACCGGCTTAAA               CGCGA GTAA TCACG                TTCTCAGCATTCAGG  45 17
        ubiC NONE
        ubiA 4096669 .. 4096687 + -11.7  -4.93968   CACGCGGATAAAAAA             GGCGACC TCAAT GGTCGCC             TTTTTCGTTGTCGCT 100 115
        dgkA 4099642 .. 4099671 +  -2.9  -4.59424   CGATAAGCGTTCCAT       CTCGGCTCAAA TAACTGAT TTTGACCTGAG        TTTTGGTTTCCATTT  65 35
        lexA 4100414 .. 4100443 +  -7.9  -3.14463   CTTGTCCTTACTTTT       CCGCTGTGGGTT GACCTGA AACCC-CGGCGG       TTCATCGCACGGATT  62 86
        dinF 4101876 .. 4101892 +  -9.4  -4.11838   AATTAACTTTGAATG              GCGCTG ATGAC CAGCGC              TTTATATCGTGATTT  78 115
        yjbJ 4102270 .. 4102294 +  -2.9  -3.27923   CGCGCTTTTTCCCTT          CAGTGTGAT GGTCGTG ATCACAATG          TTCATGCTGTTCACA  46 125
    PAJ_3420 4104477 .. 4104503 + -20.2  -3.49858   ATCTCCGCCATTCAC         GGGCGGGCGATA CCT TGTCGCCCGCCC         TTATGCTATCCTTGC 100 40
        dusA 4105567 .. 4105582 + -10.4  -5.40474   CCTAGTTCTGCCAAA              CCAGCC ATCA GGCTGG               TTTTTTTAACACCAT 100 36
        yjbO 4106139 .. 4106158 + -13.6  -5.27335   TGAAAAATAAAAGAA            GGGCTTCC TGCG GGAAGCCC             TTTTTATTTCACGGA 100 179
        dnaB 4108651 .. 4108708 +  -4.7  -2.73875   CAATACGACGACGAG TAATGC-TGCTGTGTGCCGACATGCACG ATC TGTGCATGTCGGCCCCCGCCGTGCGAAA TAGTGTTGGACAAGC  46 23
         lrp 4109403 .. 4109424 +  -6.5  -3.68569   CTGTCAACCTGTTGC           CAGCG-CAGC CCG GCTGGCGCAG           TTATTGCATCAGTGC  63 158
    PAJ_3426 4110073 .. 4110086 +  -2.3  -3.75678   GCCCCGGGCGGTACA               GGGTT TAGT GGCCC                CTTTTTATTTCAAGA  50 18
        tyrB 4111339 .. 4111360 +   -13  -5.79595   CCGTCACAGGTTCTG           GCCGCCAG CATTGT CTGGCGGC            TTTTTTATTTTCAGG 100 48
        yjbQ NONE
        yjbR 4112371 .. 4112386 +  -2.5  -3.89346   TGCTCGCCACAGAAA              TCCAG CATTTC CTGGG               TTTCTGCAATGCCGC  54 212
         ssb 4118198 .. 4118213 +  -7.5  -5.69262   TTCTACCCTATAAAA              GCCCC CTTACC GGGGC               TTTTTGTTTTTCTGC 100 60
         ada 4120405 .. 4120418 +  -3.7  -3.06686   TCAGGCGTTTATGAG               GCGAC TGCT GGCGC                TGATTTATGTGCGCT  45 27
    PAJ_3437 NONE
    PAJ_3438 4125160 .. 4125188 + -19.1  -2.70354   CGCTACACAGCAATA        TAAAAAACCCCGC TTT GCGGGGTTTTTTA        TGAGTTTATCAGGGC 100 41
        soxR NONE
        gst3 4127519 .. 4127536 + -11.3  -3.69283   ATGCACGTTGCCCGA             TGACGCC GCCC GGCGTCA              TTCTTGCCTGCCTTC  81 40
        yjcD 4129199 .. 4129224 + -11.1  -2.66009   CGATCTGACTGTCAA         ACCGGACGTTC AGCG GAGCGTCCGGA          ATTATCCGCTTTTTG  72 33
        yjcE 4131194 .. 4131205 +  -4.4   -4.0371   TTCCAGCGGCAGCCA                CAGT AACG ACTG                 TTTATCTAACCGCTG  61 231
        cidA NONE
        ywbG NONE
    PAJ_3448 4133235 .. 4133262 +  -2.8  -3.94812   CTTAACTTACAGCGC        GTTGTCCGTTTTG GCA CAAAAT-GACATC        TCTTTTTACGTAAAG  54 2
        yfaZ 4133919 .. 4133944 + -16.1  -5.60993   GTGGCCTGAGAAAAA         GGGCAGGGACC TCGC GGACCCTGCCC          TTTTTTTATGCCCGG 100 43
        gltP 4139943 .. 4139962 +   -10  -5.75945   GGTTAGCAAGACAAA            GGCTCAAC GGTG GTTGGGCC             TTTTTTTTACCCCGT 100 46
        yfeU NONE
        scrA 4142581 .. 4142596 +  -7.5  -4.65895   GTATAAATACCAAAA              GCCGC CCTAAA GCGGC               TTTTTAAATGCAACA  80 189
         aer 4144413 .. 4144436 +  -3.7  -3.53444   AGCGACCGTTTCCAG          CGCCTCACC ATGGTC GGCGATGCG           TTTAACCGCCAGTCG  50 154
        yicM 4146549 .. 4146567 +  -8.1  -5.09204   GTTAATGTGACTCAT             GGCAGCG ATATA TGCTGCC             TTTTTATTGCAGTCT  90 36
        ybiJ 4146977 .. 4147010 + -16.7  -3.91897   ATGCTTGAAGTTGTG     TGCTGACAGGACGCC TATG GGCGTCCTGGCGGCG      TTTGTGGATGCCCGC 100 40
    PAJ_3461 NONE
    PAJ_3462 NONE
        adhB 4152870 .. 4152899 + -20.9  -3.09648   AGTAGACCTCAGTGT       TTCAGCCTTCCCC GCAG GGGGAAGGCTGAA        TGTTCAGATATGTTC 100 36
        phnB 4157242 .. 4157273 + -11.6  -3.53563   TGCAGTCTGTAAAGA      CG-CGAGGCCTTCCT CAT GGGAAGGCCTCAACG      TTTGCCGCCACCTCT  83 46
        marA 4161105 .. 4161119 +  -3.4  -4.77036   TCCATGCATCGTCAG               GGCTGC CTC GCGTCC               TTTTTCCTGCTCCCA  69 81
        ptxR 4162180 .. 4162191 +  -2.2  -2.92513   GCAAATATCGCGCGC                CGAC TGTT GTTG                 TCTCGTTACCATTGT  42 74
        mdtG 4163479 .. 4163496 + -12.7  -3.10499   GCAGGCATAAAAAAA             GGCGGAC CGGA GTCCGCC              TCTGTTCAGGTGTTA  84 40
    PAJ_3476 NONE
        xylR 4170761 .. 4170780 +  -9.2  -2.60496   AAGAACCCGTGACCT            GACGGCGC CGCA GCGCCATC             CTGTTTAACGCAGAC  63 24
        msmE NONE
        yurN NONE
        araQ 4176087 .. 4176105 +  -3.1  -2.60685   GCGTAACGGAAGGTG             CGGTG AAGTAAGCG CACCG             GTTCATCTCTCATTC  41 15
         pgl 4177510 .. 4177532 +  -2.5   -3.1855   CAACTGCTGCGTATC           CGCGCTGCC GCCCA GGTCGCGGG           TTAAATGTTCACCGG  43 69
    PAJ_3485 4178375 .. 4178388 +  -3.1  -3.33162   GGCAGCATTTTGCCA               TGCTG TTGC CAGTA                TTCTGCGCTGGCATA  47 219
        yeaT 4179713 .. 4179734 +  -7.2  -2.78438   TAGATCGACTGTGAG           CACGCCTC TGGTCT GAGGCGCG            GTTTAACCTCTGGTG  57 132
         tar 4181598 .. 4181614 +  -8.7  -3.30243   CGTAAGTCACCATTT              CATCCTG ATC CAGGGTG              TTGTCACGAATAAAT  66 426
        scrK 4183764 .. 4183796 +  -7.7  -3.06796   CGGCCGCTCATCCAG     CGGGC-CTGTCATC ACTAAA GGGGACAGCGCCCG      TTACCTCAGGTCGGG  60 122
        lacZ NONE
        lacY 4188565 .. 4188600 +  -7.7  -2.70932   TGATCCCTTCCTCAA   GACAACCGGACAGGCGT CATG ACGCAT--CCGGTTGTC    TGCTTGCCGACCGCG  58 38
        scrY 4190327 .. 4190342 + -11.8  -3.53012   CTGGTTCTGATCAGT              CGGCCC TGCG GGGCCG               TTTCAGCCGGGCCGA  83 119
        scrA NONE
        scrB 4193315 .. 4193326 +  -7.2  -2.75975   GCGTGGCAGAAGAGA                CGCG CGAA CGCG                 TGATGTCTCTTGCGC  57 173
        scrR 4194704 .. 4194716 +  -6.3  -5.09225   GCGGGCAAATAAATT                TCATC ATT GATGA                TTTTTTCGCTGAGGT  86 516
       sqrdl 4199530 .. 4199542 +  -6.9  -3.62597   GACGTCAATATTTTG                TGCCC GGA GGGCG                TTATTGCAGAGTAAC  63 144
        yhaJ 4201434 .. 4201449 +  -4.6  -3.03007   TCGTGACAGAGGGAT              CGCGAT GAGG AACGCG               TCTTCAGGGGCTATT  49 35
        iucA NONE
        iucB NONE
        iucC NONE
        iucD NONE
        iutA 4212122 .. 4212134 +  -4.1  -2.95483   GGTCGCACCTTTGGG                CTGAA CTA TTCGG                TACTGTTTTAAGTCT  47 2
         tcp 4214027 .. 4214049 + -12.7  -4.11484   TCTGATAGTGGCGAA           GCAGTGGCC CGGGC GGCCGCTGC           TTTTAAAGGATTACG 100 36
        yiaJ 4228409 .. 4228424 +  -6.1  -3.68366   GCCTGAAAACGCCCG              GCCTG CCGAGC CAGGC               TTAGTTTTCAGGTAG  61 35
         cex 4234802 .. 4234814 +  -5.5  -4.56597   GTAATAATGTTGTCC                TGCTG TTC CAGCG                TTTTTCCCCAGACAG  73 519
    PAJ_3532 NONE
        acpD 4237055 .. 4237066 +  -4.4  -4.67982   CGTCAGGACTATGCT                GGAT GACG ATCC                 TTTTGTTGCATCAGC  71 235
        feoA NONE
        feoB 4242937 .. 4242976 +    -8  -3.08133   TAAAAAAGAGTATTC  GATATATCAGCCGCGTGAA TAT TTATCGTGGC-GATATATC  TTCAATACATCGATG  60 259
        fcbD NONE
    PAJ_3539 4245820 .. 4245857 + -10.9  -2.75074   TAAGTTAAGCTTTTA   TGAAAGGTATTATTATT TTTG AGAAATAATACCTTTCA    TCATATTGAAATACA  74 38
        yibD 4247316 .. 4247339 +  -5.9  -4.16016   CCGGATCGTCAGCAT          CAGGCGCTG TTTTTC CAGCGTCAG           TTTGTTAAGGCATGC  69 136
    PAJ_3541 4250124 .. 4250148 + -11.5  -5.30575   AAACTGGAAGTTAAA          GAGGGTGAGAT TAT ATGTCACCCTC          TTTTTTAAATTTTTA 100 519
        fxsA 4257553 .. 4257571 + -11.7   -5.4659   AATCTCATCCTCTTA             GCGCGAC ATCAG GTCGCGC             TTTTTGTTTGTCTTC 100 39
        groS 4258059 .. 4258075 +  -5.1  -2.75064   TCTGGCGATTGTTGA              AGCGTAA GTT TTACGCG              TAATTCACTGAACGA  49 19
        groL 4259791 .. 4259814 +   -16  -5.45802   CTTGCGTCATAAGAA          CCCCCGATCG GAAA CGGTCGGGGG           TTTTTCTTTTGCAGA 100 53
        yjeI 4260338 .. 4260359 +   -13  -5.49809   CAACATTTTTTGAGA           CGACCGGC CAATGT GCCGGTCG            TTTTTTTAGCGTTTA 100 57
         efp 4262112 .. 4262131 + -13.6  -5.47821   AAAATAACCTTGAAA            GGCGCATC CTGT GATGCGCC             TTTTTTTGAGTGAGT 100 34
        ecnA 4262329 .. 4262345 +  -2.3  -3.56643   CAGGCTCGCGACGTT              GCATA ATCAGTC TATGC              TTTAAAAGCTGTACC  47 71
        ecnB 4262619 .. 4262629 +  -6.8  -4.87133   CGGCCTGGCGTGCCT                 GCTG CAC CAGC                 TTTTGTTTCACACCT  84 122
        poxA 4264250 .. 4264270 +    -9  -3.75332   GTTTAAGCGGATAAA            CAAGGCCT CAAGT GGGCCTTG            TTTGCGTTCACCGCT  74 76
        yhcM 4268611 .. 4268623 +  -4.8  -3.61103   AGAGCGAAGAGTACC                TGCG GCTGG CGCA                TTTACCCTGAGATTC  55 3
        rplM NONE
        rpsI 4269726 .. 4269753 + -11.4  -5.19328   CAGACACAGTTGGCA        CAAAAAACCCGC TCCG GCGGGTTTTTTA         TTTTTATTCTCAGGT 100 56
        sspA NONE
        sspB 4271150 .. 4271169 + -12.2  -5.51402   TGAAATAACACAGAA            TACCCGTC ACCT GACGGGTA             TTTTTTTGCCTGTCT 100 33
        arcB 4282377 .. 4282390 +  -4.5  -3.35616   TCGGACCCAAAACGT               TTCGG GTCA CCGGA                TCTTATCTCATCATC  52 453
        mtgA 4283589 .. 4283606 +  -4.7  -3.83026   CAAACAGTTCAATGA             CGGCGGC CAGG GCTTCCG              TTTCCTGTGGACCGC  57 66
        yrbF NONE
        yrbE NONE
        yrbD NONE
        yrbC NONE
        yrbB 4294893 .. 4294913 +  -8.2    -4.323   GCCTTTCTCGTCAAA            GCCCCGGT CCCGT ACAGGGGC            TTTTGCGTATTTAAG  80 54
        yrbA 4295223 .. 4295237 +  -2.8  -4.88407   AGAGTGGGCGCGTGA               CCGT AAACTCA ACGG               TTTTTGATTCCCTCC  71 4
        murA 4296593 .. 4296613 + -11.2  -5.78622   GTCATGCTAATGAAA            CCAGCCTT ATGAC AAGGCTGG            TTTTTTTTCGGCTAC 100 50
        rplU NONE
        rpmA 4299016 .. 4299036 + -16.9  -4.78149   ACGCACGAATTGAAG            GCCCCGCAA CTG TTGCGGGGC            TTTTTACATTCTGCG 100 72
        yhbZ 4300394 .. 4300424 + -15.4  -4.42062   GCTAGACCGCTTATG       ACTGCCCCCTTTCC ACC GGAACGGGGGCAGA       TTTCTTTCAGGGCTG 100 36
        greA 4303541 .. 4303555 + -12.8  -4.41548   TAAAGAAAGGAAAAA               GGCCGC GCT GCGGCC               TTTTATCCCATGTAA 100 78
        rrmJ 4304850 .. 4304865 +  -7.6   -3.2614   GTCGAATGGCCGTAG              GGTTGA TTAT TCAACC               TTCCTGTCGGAAGTG  62 231
        hflB 4306713 .. 4306729 + -10.8  -5.14477   CGTCTTTTAATAAAA              CCCCGG CTGGT CCGGGG              TTTTTTACATCTATA 100 48
        folP NONE
        glmM NONE
        secG 4309909 .. 4309924 + -10.4  -5.64873   TCCAGTGATAAAAAG              CCCCGA ATAT TCGGGG               TTTTTTGTTATTAGC 100 435
        yhbC NONE
        nusA NONE
        infB 4314678 .. 4314702 + -16.5  -3.90922   GCGTTAATGATGCAA          TTTGGGAGGCC GCT GGCCTCCCGAA          TTATTTGGGAGAAAT 100 47
        rbfA NONE
        truB NONE
        rpsO 4316551 .. 4316567 + -10.8   -5.0133   GAGTTTCATGAAAAG              GGGGCC TTTAT GGCCCC              TTTTTTCGAGCAATG 100 110
         pnp 4318917 .. 4318943 + -18.8  -4.57353   AGTCTTTCCTGATTT         GCCTCTCCTTGC CTG GCAGGGAGAGGC         TTTTGTGTCATCGCG 100 40
        nlpI 4319950 .. 4319973 +  -3.8  -4.70583   TGTAAAACCTGTCAA          GTCATCATCT TCAG GGATGAGGGC           TTTTCTGTTCGTCAA  71 59
        deaD 4322012 .. 4322031 + -13.6  -5.67967   TCGTCGTAATAAAAA            GGGAAGCC TGCG GGCTTCCC             TTTTTTTGTCCTGAT 100 51
        yhbT 4325796 .. 4325811 +  -2.5  -2.77999   CGCGAAAGCCGCACA              GGCAC GCGCGG GTGTC               TCATGTTAATACGTA  40 1
        yhbS 4326483 .. 4326498 +  -2.4  -3.28712   GCAGGGCCCGGGCCC              CGCGCC CACA GGCATG               TTGTCCAAGGCGGCG  44 188
        yhbP 4327206 .. 4327216 +  -6.8  -3.87815   TCCGCCGGCGTACGG                 CTGG TGA CCAG                 TTTGTCACCGTCAAC  66 129
        yraR 4328465 .. 4328496 +  -5.8  -3.42503   CAGATTTTCTGATTT      CG-GCTGCCGCGC CACAGGA GCGTGGCATCGCG      TTCTGCCTCTTCAAA  56 45
        nahA 4333675 .. 4333689 +  -5.6  -2.90075   TGAATAAGCGGGTGT               CCTTCG CGC CGCAGG               TGTCCTTGGCCGCGG  49 38
        bisC 4337634 .. 4337651 + -11.3  -5.75342   TCTTGATTACACCGA             CCTGCGT AGAT ACGCAGG              TTTTTTTTGCCCGAA 100 163
        ftsI 4339690 .. 4339707 + -12.7  -5.75945   TCGTTATTACACCAA             CCCACGC AGAT GCGTGGG              TTTTTTTTGCCCACT 100 203
        mdtA NONE
        mdtB NONE
        mdtC NONE
        oprM NONE
         aas NONE
        ygeD 4352274 .. 4352297 + -16.7  -3.96452   CCCTTGATGTCACCA          CGGCGGGGC GCGCTG GCCCCGCCG           TTTGGCTTTTCCTTC 100 34
         tar 4354289 .. 4354311 + -19.2  -5.24129   GCCAGACTGAAAGCC           GCGTGCGCAC GCA GTGCGCACGC           TTTTTTATCAGCGAC 100 84
        yjgD 4358047 .. 4358064 + -12.7  -3.97088   CCACTAATCAACACC             GGCGGAG CCTG CTCCGCC              TTTCCTGTTCTCCGG 100 34
        miaE 4359121 .. 4359151 +  -2.2  -2.76671   ATATCCGGCGCGCTG       CAGGCGAGGGGGGC AAT GCCGCCGCCGCCCA       TCACTTTTCCCTGAT  39 290
    PAJ_3641 4360907 .. 4360917 +  -2.4  -4.37092   TTTGGCCAGGCGCTC                 CAGC TCG GCGG                 TTTTATCCACCAGAT  63 263
        yjgP 4366969 .. 4366995 +  -5.8  -3.40309   CGTGCGCGCTTTACA         CGCGGAGGATCG GTC TGATGTTTCGCG         TTCTCGATCGTTATA  57 8
        yjgQ 4368080 .. 4368096 + -11.5  -5.64274   GCTGACAGTCAGAAA              GGCCGCG CGA TGCGGCC              TTTTTTTATGGCTGG 100 43
        rbsB 4376159 .. 4376188 + -15.8  -3.33696   TTAAGTAACGCCTGA       CTCGCCGC-CTGC ACTCA GCAGTGCGGCGAG       TTCGTTGACGGAGGG 100 33
        sgcQ 4378189 .. 4378209 + -15.5  -3.73072   TCAGGCCGCACCTGA            GGGAGGTGA TAT TCACCTCCC            TTTAATCACAGGGTT 100 314
    PAJ_3658 4382558 .. 4382584 +   -13  -4.09864   AAGCACAAGTAGCGT         TGAGGTGGCAGC CCG GCTGCCACCGTA         TTTTACCGACTGCGT 100 29
    PAJ_3665 NONE
    PAJ_3666 4390051 .. 4390072 +    -3  -4.04579   TGTGAGCAGGTGCCA           GCCTTG TTGAGCGGCC CAAGGC            TTTAATCTTTCTGCC  56 426
    PAJ_3672 NONE
    PAJ_3673 NONE
    PAJ_3674 NONE
    PAJ_3675 NONE
    PAJ_3676 4409505 .. 4409515 +  -3.2  -4.57073   AAGGAAATATTATGA                 GCTT ATT GAGC                 TTTTTCAGAAAAATC  66 491
    PAJ_3680 4415083 .. 4415094 +    -3  -4.37092   TATTCATTTAAAAAA                TATG GAGG CATA                 TTTTATGGCGAACAT  62 241
    PAJ_3681 NONE
    PAJ_3682 NONE
    PAJ_3683 4419146 .. 4419168 + -11.3   -4.2828   TCGTTAAGGTTCAGG           CTCCCCTCT CTGGA GGAGGGGAG           TTTTACTACATCACG  87 461
    PAJ_3689 4427540 .. 4427570 +  -6.1  -3.72027   GTTGCTGGCGGCTTT       TGTGCTGATCCCG GATAG CTGGATCAACACG       TTATTCATGAGCCAT  61 63
        rbsK NONE
        dapA NONE
        yiaL NONE
        yjjL 4432016 .. 4432034 + -11.7  -3.30124   AGCTAACAAGCCCAA             CCCTGGC GGCCA GCCAGGG             TTGTACCAAATGGCA  82 35
    PAJ_3694 NONE
    PAJ_3695 4435245 .. 4435263 +   -11  -3.14132   CCAGCACTTTTTCTC             CGTTGCCA CGC TGGCAGCG             TTCATCCACGCGCAA  76 221
       acpP3 NONE
    PAJ_3697 NONE
    PAJ_3698 4437644 .. 4437665 +  -6.5  -4.09739   TGCAGTACGCGACGA           CGCT-GCTGG CAC CCGGCTGGCG           TTTTCACAGCATTCA  68 172
        ycdQ 4439937 .. 4439966 +  -6.3  -3.13522   GAACGTATGGGAGTG       GCGCCATGAGAGG CCTG CTATTCCTGGCGC        TGTTGATCAGCCCGT  57 443
    PAJ_3700 NONE
    PAJ_3701 NONE
    PAJ_3702 NONE
        fabF NONE
    PAJ_3704 NONE
        fabG NONE
        fabF 4447084 .. 4447098 +  -2.8  -3.86194   TCAAACGCTGGCACT               GATATG TAT CAGATC               TTTCTGGGAAAGATT  54 24
        acpT 4447667 .. 4447695 +    -6  -3.05069   GGCGGCTGGCATAAA       GGGCTGGCCACGTT CTC ACCG-GGC-AGCCC       TGATTGTTTAGTGAC  53 27
        yieL 4449376 .. 4449415 + -15.1  -2.57132   GCTTCAACGCTGACC  GCGCACAGGATGAGCAG AGCATC CTGTGTATCCTGTGCGC   ATTCTCCCCAACGCG  95 46
        ydiV 4451420 .. 4451440 +  -6.2  -4.99947   AAATTTAAAGCAGTT           TG-TGCGAG ATGT CTCGCAGCA            TTTTGTTTAATTACA  81 388
        hprA NONE
        yneB NONE
         tdh NONE
        xylB 4456000 .. 4456013 +  -5.3  -3.51475   TAACTAAACAAGAAT               CGTTA TTTA TAACG                TCTCTTTATTGTTTC  56 54
        dgoT 4457557 .. 4457587 +  -3.9  -4.93365   GCTGAATTCGGGAAA       GGCACCGATCC TGCGCGTAC GGCTCGGTGCG       TTTTTGATTGTGCCG  74 206
        mmuP 4461519 .. 4461554 +   -11  -3.08679   ATCGACTAACGCAGA    CAGACGCTGCCGCGCA CTGA TGTACGGCAGCGACAG     TATTGAATCCGAGGA  74 32
        gabT 4463406 .. 4463419 +  -3.8  -3.96148   ATACCTTTACCACTG               CGCA GCAGAA TGCG                TTTATCGTAGCAACG  58 515
        proW NONE
        nrtD 4474473 .. 4474507 +  -3.7  -5.86465   AATTCATTGCCTGCA    CATTGA-AAGCCAGTT GTTT AACTGGCTTGTTCGTG     TTTTTTTCTCTTATT  91 215
        inaA 4479087 .. 4479116 +  -2.7  -3.43338   CCAGGTCGGATTGCC       GCCCTCGCAGGGGA ATT TCGCC-GCCAGCGC       TTCGTTGATATCAAT  48 306
         gno 4481354 .. 4481367 +  -5.9   -2.6381   TATCTACGTGGATGG               CGGCT GGCT GGCCG                TGCTGTAAGCGTTAT  51 4
        idnD 4482440 .. 4482450 +  -2.6  -2.87683   AAAGTATTAGTTCAG                 TTTT CAT AAAA                 TATCTCAGAACCTGT  42 17
        ydfJ 4484009 .. 4484029 +  -7.6  -3.72695   GGTTGAACCCTGTCT           GTCACTGCG TTAG CGCAG-GAC            TTTGCTGGAAAGGAT  68 46
        ycbG 4485044 .. 4485066 + -10.5  -3.09878   TGGCAGAATAAACAA           GGGAGCCAG TGGAC CGGGCTCCC           TCTTCAATCAATGCA  73 271
        ampC NONE
        yohN 4488032 .. 4488050 + -13.1  -4.87328   TATCTCTTCTTTCAA             CGGCCGC GTTAA GCGGCCG             TTTTCTATTTCTGTC 100 61
    PAJ_3737 4489192 .. 4489211 +  -6.4  -2.83403   TGCATGACATCAGCA            CGGGACAG CGCA TTGTCCTG             CTTTAATGCCGAAAA  54 367
    PAJ_3740 4494892 .. 4494924 +  -5.4   -4.3898   CAGCGAAGAGTGGGC     GCGG-GGTAGAGGAC TGCA GACCACAACCGCCGC      TTTTCTGGCGATGCT  70 394
        ydfJ NONE
        purR NONE
        yeiK 4499127 .. 4499146 + -13.6  -2.70022   CTCCCCGAGTAAAAC            CCAGGCGA TTCG TCGCCTGG             ATTCTCTGCCGTCAG  84 29
        jen1 4500764 .. 4500785 +  -5.1  -3.85567   CCACGCTTAACATCC           GC-GCTTTGG CAC CCAGGGCGGC           TTTGAGTTTGCGGTT  59 249
        yjjZ 4502956 .. 4502966 +  -3.2  -4.01088   ACCAATTCCGCCACC                 TTCG CAT CGAG                 TTGTCTTTTCATATC  58 181
        holD NONE
        rimI NONE
        yjjG 4506048 .. 4506064 +  -7.9  -5.15634   ATCTGGAAAGGAAAA              GGCCCTT AAG ACGGGCC              TTTTTTCATCGAGTG  90 59
        serB 4508037 .. 4508067 + -12.4  -3.29144   GGATTGCCGCCTCAC       CCGCTGCAGCGCGC AAT GAGCGCCTCAGCGG       TTATGCGGGCAGTGC  85 166
        radA 4509331 .. 4509357 +  -2.9   -3.4486   GTTGTGCAAAAGGGC        CGGTGAG-GGAC AACT GTCCTCACGTCG         TTGATCATTTTTTGC  49 64
        nadR 4510642 .. 4510670 +  -2.3  -3.81154   TTTTACCTTCATACC        GGGGCGGGG AAGGAACAAGA CGTCGCCCC        TTTAATGGCTATTTT  52 44
        yqeI 4512364 .. 4512377 +  -3.1  -4.00486   CGCTGTCGTCGCGCG               CACGGC CTG GCC-TG               TTGTTATCTTATGAA  56 505
      f17a-A 4513190 .. 4513210 +  -6.1  -2.98823   ATCTAGCGTTATTTT            GTTGCTGAT GCT GTCAGCCAC            TCTGTGTCAGGCGAG  53 88
        mrkB NONE
        htrE 4516361 .. 4516372 +  -2.2  -3.18433   GCGGTGATCACCTAC                G-CGG ATG CCGTC                TGTCGTTTTTAGAAT  43 2
    PAJ_3761 NONE
        ecpD 4518531 .. 4518552 +  -4.3  -3.55444   TGGCCTTCCAGCACG           CGCTGGTGA GCGG TCTCAAGCG            TTTCCACACTCAGGC  54 117
        ptxR 4520490 .. 4520509 +   -15  -2.51413   CTGAAGAAAAGAGAA            GGGCGGCA TCGC TGCCGCCC             CTGTGTTACTTAATA  89 37
        rbkS NONE
        fucP NONE
    PAJ_3769 4527309 .. 4527323 +  -2.8  -4.88129   TTTAATGCAAATTAA               CCACAT AAA ATGTAG               TTTTTAATGATTTTT  71 501
         ddc NONE
        alcA NONE
        rhbF 4532728 .. 4532749 +   -13  -5.47914   CTCCTATCACATCAG           CGCGGTCG CTCAGT CGACCGCG            TTTTTTATCGTTTTT 100 53
         cmr 4534438 .. 4534464 +    -5  -2.61681   GAGCGTAAAGCTCGC         CAGCGTGCTCAG GCG CGGAGTGAGCTG         ATTATGGGCTTCCAG  46 450
         slt 4550306 .. 4550337 + -13.1  -2.80816   CTACTAGCTGTGTTA      AGCTTCCGTACTC TTTAGC GAGTACGGAAGCC       TCTCATGAATCAACC  81 34
        trpR 4551005 .. 4551030 +  -6.7  -3.62478   CTGACGGGCATTCAT         CACGCGCTGGC GTGC GCCAGTTCGCG          TTTCGAGGTTGGTTA  60 368
        gpmB 4551983 .. 4552011 +  -6.9  -3.14468   GTAGGCGGTTCGCTG       CGCTTT-TTACC GCCGTG GGTAATAAAGCG        TTCGATGTCCTGCCC  54 119
        creA 4553462 .. 4553505 + -15.4  -2.52635   TTATGCCGTGGCACT AAGGCAATCATTAAACGCCC GTAA GGGCGTTAAATGATTGCCAG CTTAATCCTGCAGGT  95 24
        lasT NONE
        arcA 4553464 .. 4553503 - -22.4  -3.14211   ATGCCGTGGCACTAA  GGCAATCATTAAACGCCC GTAA GGGCGTTAAATGATTGCC   AGCTTAATCCTGCAG 100 29
         rob 4551643 .. 4551668 -  -9.7  -3.08464   GCAGGAGGCACTTAA         TGCCTGCCTGGC GCT GCC-GGCAGGGA         GCCGCCCGCTACTGG  66 285
        yjjX 4550612 .. 4550645 - -10.3  -2.62439   AACAGCCTGAAAGAG     GCGCCTCC-GGCACTG AAG CAGTGGCTGGAAGCAC     ACCTGACGCGTCGCT  69 43
    PAJ_3781 NONE
        ntaR NONE
        amiC 4540631 .. 4540646 -  -3.2  -2.81187   AAATAGGCGATCATA              GGAAGT CCTT ACTGCC               GCCCCACAGAGGGAT  43 58
        braD NONE
        livM NONE
        braF NONE
        braG 4536444 .. 4536460 -  -9.4  -2.55551   TACAACGTGAAGGCA              GGCCAG GCGAT CTGGCC              TGCCGGGGAGGAGAT  63 42
        foxA 4534023 .. 4534039 - -10.8  -2.89564   GCCTGAGGTGAGACA              GGCGGC CAGGT GCCGCC              TGTGGGAAGGATCAG  74 37
        deoR 4522386 .. 4522400 -  -8.6  -2.61548   CGCGACGAGAATTTA               GCAACA GCC TGTTGC               CGCCGCGTGACAGAA  61 46
        yjjK 4520490 .. 4520509 -   -15   -4.0865   CTGAAGAAAAGAGAA            GGGCGGCA TCGC TGCCGCCC             CTGTGTTACTTAATA 100 31
         qor 4518450 .. 4518479 - -16.4  -3.02147   CGTAACATAACCATA       CGCGGGTGCCCG TATTGT CTGGCACCCGCG        AGTGATCAGTAAACC 100 31
         smp 4506048 .. 4506064 -  -7.9  -4.55128   ATCTGGAAAGGAAAA              GGCCCTT AAG ACGGGCC              TTTTTTCATCGAGTG  81 104
        rsmC 4503117 .. 4503133 -  -5.1  -3.01791   ATTTTGGTGCGAAGA              GAGGG ACTTGAA CCCTC              ACGTCCGTTAGGACA  51 247
        yddV 4501180 .. 4501213 - -14.7  -3.14132   TCCTGTTTTCACTAA     GTGC-CGCCGGATAAC ATG GCTATCCGGCACGCAC     TTATATGACGTCACT  91 26
        ybaK 4500494 .. 4500519 -  -8.3  -3.53012   CCTTTGGCCGCGAAA         CGCG-CGGAATT AAA ATTTCCGGCGCG         ATGGCAAAGCAGACA  69 43
    PAJ_3741 4494204 .. 4494222 -  -4.4  -3.09015   GCCAGAGCCATCGAA             TCCGCCAG CGG CTGGCGCT             TCCTGGCCATCAACA  47 323
    PAJ_3739 4491825 .. 4491837 -  -4.1  -4.82901   TCGCGGTCAGAAAAA                GTATC ACT GACAC                GAATTCAGACAACGT  71 241
        mdoB 4489503 .. 4489517 -  -4.9  -2.87211   AGCCTCTTTTACACA               GCCCG CTTAC CAGGC               AGTGTAAAAGGTGGA  47 66
        yecA 4485044 .. 4485066 - -10.5  -4.27512   TGGCAGAATAAACAA           GGGAGCCAG TGGAC CGGGCTCCC           TCTTCAATCAATGCA  85 33
        rspA 4478928 .. 4478971 - -12.4  -3.93262   CCTGAACACAGTAAA GCCGACCTGAACGGCCTG TTGTGGTC CAGGCCGGCCAGGCCAAC AATGCCAGGGAAAAG  91 84
    PAJ_3725 NONE
    PAJ_3724 4468737 .. 4468756 -  -2.2  -3.90291   AGTGGTGCAAGTAAA            TTTATTCA GTAA TGAATTAA             AGCAGCATGAATTCA  52 397
        kduI NONE
        kduD 4467038 .. 4467053 -  -3.2  -3.70902   CCGGGCAGACGTAAA              GGCTTA ATGC TCAGCC               TTAACGCGCGAGCCA  53 26
        yteR NONE
    PAJ_3720 4463009 .. 4463026 - -10.5  -3.92373   CACTGCACGGATAAA             GCCCGAC GTCA GCCGGGC              TGGCGATATCCGTAA  82 71
        yerI 4458907 .. 4458918 -  -3.6  -3.53012   CGGCGGTGCGTTAAA                CGCC AATC GGCA                 GCGCGGCACCTTCAA  50 9
        oruR 4457717 .. 4457728 -  -5.8   -4.0942   GAGTGACTACAGAAA                CAGG CCGT CCTG                 AGACTTGCGGCAATC  66 5
    PAJ_3709 4449155 .. 4449175 -  -2.5  -4.17556   CAGACCGTGAATAAA            CAGCTGAAA AAC TTTACGCTG            GTGGTGGGCGATAAA  56 322
        exuT 4424930 .. 4424954 -  -7.9  -4.66833   CCTGAAGCTGAAAAA         GGAGGCACGT CCCTTC ACGTGCC-CC          GGGACACATTCCGCG  85 47
        yahN 4423684 .. 4423697 -  -3.7   -4.3467   ACTTTTACAGGAAAA               CCCCC TCTC GCGGG                TCTGTTAATATTTCT  63 442
    PAJ_3686 4421691 .. 4421704 -  -8.1   -3.3487   AGTGAAGCAAATACA               GCCCT TATC AGGGC                TTCACTTAATACAGC  64 342
    PAJ_3685 4420227 .. 4420242 -  -3.2  -3.33839   AAAATTAATAAGATA              CCAGGA TTGA TCTTGG               CGGTGAAAAATACTC  48 423
    PAJ_3684 4418752 .. 4418778 -  -4.4  -3.45849   GTTATACCACGATAA         CGACGCTGCT GGGTATG ACCAGCGTCA         TGGGCACGGATGTGC  52 426
    PAJ_3679 4413138 .. 4413153 -  -2.5  -3.93695   GTTATCACTTACAAA              GCCTG GCGTTT CAGAC               GCGTTCAGCGCGGCT  52 30
        yjiW 4411465 .. 4411504 -  -5.6  -3.66356   ACTCTTAACGTTAAA  GACCCAACTCGCTCCCGC CTCC GCAGGAGCAAGCCCCATC   AACCCTTACCACTCC  59 31
    PAJ_3677 4410361 .. 4410382 -  -2.1  -3.12351   TTCCGCCATACTGAA           CGCGATATC TTCA GGCAACGCG            ATGGCAGTGGCGTTA  43 286
    PAJ_3671 NONE
    PAJ_3670 NONE
    PAJ_3669 NONE
    PAJ_3668 NONE
        mcrB 4390660 .. 4390671 -  -5.8  -3.16039   AAGCATCTGCACCAA                TGCC GCAC GGCA                 TGATTCAGGTTGTTC  55 281
        yjjA 4387364 .. 4387386 - -14.9  -3.88137   AGAAGGGGCGATAAA           CCTGCCAGC GCGGA GCTGGCAGG           CGGCTGTCAGGAGAT 100 32
    PAJ_3663 NONE
        marC 4385776 .. 4385801 -  -2.5  -2.63435   TTAATGATTGATAAT         CCTACTGTAAC CCGC GCCAGAGCAGG          TCAAAATGCCGGTTT  39 118
        yddS 4384130 .. 4384143 -  -4.5  -2.90392   CATGCGTCAAGCATA               GCCAGC GGG GC-GGC               AGCCGTCAGTAAAGA  47 63
        yjgR 4382509 .. 4382533 -    -5  -4.29738   CTACACCCAGGAAAA          GAACACCG TCACCAATC CGGTGTCC          ACCAGCTGGAAGCAC  64 79
    PAJ_3657 4379850 .. 4379861 -  -2.2  -5.60993   TTGCCGACAAAAAAA                GGAC TATA ATCC                 CATTTATCGCTACCT  83 67
        yjiN 4377935 .. 4377953 -  -5.2  -5.49234   ACAGGCAACAAAAAA             CCCCGC GGGTGAG GCGAGG             TTTTTTGTTTACGTC  87 318
        rbsK 4375983 .. 4375996 -  -3.8  -3.35996   CACCGGTATCGATAA               CGGT TATGTC ACCG                CCGTCCTGCAGCAGG  48 173
        cytR 4373802 .. 4373816 -  -4.2  -5.04601   CGCAGAAATTAAAAA               GCGC GTTATTT GCGC               TAAAGTTGTGCACTT  77 62
        rbsA NONE
        rbsC NONE
        pteR NONE
    PAJ_3648 NONE
        argE 4368467 .. 4368492 -  -7.5  -3.05463   ATCCTCGCCATTCAA         GATCGCAGTGG CTCA CCACGGCTATC          TCGTCTGCCTTAATC  59 273
        pepA 4364063 .. 4364082 -   -15  -4.54026   GTTTAAAGAAAAGAA            GGGCGGAG TAAG CTCCGCCC             CGATGGGTTCGGTGG 100 50
        holC NONE
        valS 4360674 .. 4360693 -   -15  -5.31456   TGAAGCCATAAAAAA            GCCCACGC CAAA GCGTGGGC             TGTAGCAAACACGAA 100 50
        yjgM 4358519 .. 4358560 -  -2.9  -4.46212   TGGTCTATCAGAAAA TCACCTCAAGCCGTTACGCC AAA GGCCTG-CTGCGTGAAGTGA CCACCCACGAACCCG  64 327
        argI 4356243 .. 4356259 - -12.3  -5.93809   TGCGGACAAAAAAAA              GCCCCTT AGA AAGGGGC              TTTTTTAAGATCGGT 100 211
        pyrB NONE
        pyrI 4354758 .. 4354777 -  -3.5  -4.36914   CTGCCCGCCATAAAA            CGCGGTT CATTAT AAGCGCG             GCAGGGCCGATTAAA  63 36
        yjgF 4354287 .. 4354313 - -12.2  -2.82505   ACGCCAGACTGAAAG         CCGCGTGCGCAC GCA GTGCGCACGCTT         TTTTATCAGCGACGC  80 31
        galR 4333725 .. 4333744 -  -7.1  -3.68073   CACCCCAGCCAATAA            GCGG-GCG TCCTT CGCGCCGC            AGGTGACCTTTGCCG  67 306
        nrdD 4328891 .. 4328907 -  -2.2  -2.78725   ACATCGTAGTAACGA              TGGATG CGCAT CATCCC              AGCTGTCCGCTATCC  40 19
        nrdG 4328397 .. 4328430 -    -8  -2.95538   TGCCGAAGAAAATAC     GGGGTTCACGCTGA TCGAGT CCGGCGCGATCCCC      CGTGTTTCAGCGTAG  60 32
        yhbO 4327109 .. 4327134 - -13.3  -3.25202   GAGGCGTAAATAAAG         CGCCCCCTTCC TGGC GGAAAAGGGCG          TGGGCCGTTACAGTG  88 33
        yhbQ 4325789 .. 4325806 -  -6.9  -2.77787   AACAGGACGCGAAAG             CCGCACA GGCA CGCGCGG              GTGTCTCATGTTAAT  54 523
        yhbU NONE
        yhbV NONE
        yhbW 4322012 .. 4322031 - -13.6  -5.06414   TCGTCGTAATAAAAA            GGGAAGCC TGCG GGCTTCCC             TTTTTTTGTCCTGAT 100 72
        yhbY 4303534 .. 4303563 - -15.9  -4.45117   TACAGTGTAAAGAAA       GGA-AAAAGGCCGC GCT GCGGCCTTTTATCC       CATGTAAGAGCATGG 100 57
        dacB 4301294 .. 4301317 - -11.7  -5.88565   GCGATAATAAAAAAA          CGCAGCAGG TGGTCG CCCGCTGCG           TTTCCTAACATAAAT 100 40
        ybdB 4300015 .. 4300031 -  -2.2  -3.87815   GGCGAGCTGGAGAAA              TACAGC GATAA GCTGTT              TAACAAGCCGCGCTG  54 425
    PAJ_3590 4298428 .. 4298447 -  -7.2  -3.23296   AACAACACCGAGTAA            GCGAA-GGT CAG ACCGTTCGC            CTGGAAAAGCTGGAC  60 125
        ispB 4297122 .. 4297148 -  -6.5  -2.58861   GAGGAGTGGGAGAAG         GTCACGGAGCC GTGGT GGCTCCGTCAT         GAACAGAAATCAGAA  53 35
        sfsB 4296593 .. 4296613 - -11.9  -3.91911   GTCATGCTAATGAAA            CCAGCCTTA TGA CAAGGCTGG            TTTTTTTTCGGCTAC  88 54
        yrbG NONE
        kdsD NONE
        kdsC NONE
        yrbK NONE
        yhbN NONE
        yhbG NONE
        rpoN 4285671 .. 4285685 -  -2.8  -2.72144   TCATTTCTGTCAAAC               CAGC TGTTTAC GCTG               ATTTGAAGGCGGTAT  41 5
        yhbH 4285292 .. 4285312 - -11.8  -4.53163   GCACAGATGACAAAA            CGGGGCGG TTAAT CCGCCCCA            TCCTTTCAGCTTTGC 100 69
        ptsN 4284697 .. 4284710 -  -9.5  -2.71712   TCTCCCGTTTTAAAG               CCGGC TTAC GCCGG                TAAATCACGCGCTTT  66 39
        yhbJ NONE
        ptsO 4283145 .. 4283180 - -14.9  -2.79796   CCGTACTGGACGACA    GTGACAGC-CGGATGC GTGGA GCATCCACGCTGTCAC    AGCAAACGGCAAAAA  81 396
        gltA 4273092 .. 4273104 -  -4.8  -3.14132   CTGTGCTCTCAGCAA                CAGC CTGCT GCTG                AGAGGATAAGGATGC  50 112
        cysJ 4271211 .. 4271233 -  -8.5  -5.65177   ACAGGCATAAAAAAA          TCCGGG-AAC ACAG GTTGCCCGGA           TTTTTGCTTTCTGCC 100 48
        yhcB 4266897 .. 4266919 - -15.6  -2.93708   GGTTCGCAAAAACAG           CGGGCACAGC GTC ACTGTGCCCG           ATCGTGCTTAGTCGC 100 33
        degQ 4265391 .. 4265425 -  -8.7  -2.88243   GGGAGAATAACATGA    GAGCGGCGGACACA CACGTGCT TGTGTCCGCCA-TC     GTGCGGGGTTTATCT  62 35
        degS 4264250 .. 4264270 -  -8.3  -3.92522   GTTTAAGCGGATAAA            CAAGGCC TCAAGTG GGCCTTG            TTTGCGTTCACCGCT  73 39
         blc 4262531 .. 4262555 - -14.4  -4.20696   GCAGTAACGGTAAAA          CCGGTACGAA CGTTT TTCGTACCGG          CCTTTCTCTAGCCCT 100 33
        yjeK 4260146 .. 4260161 -  -6.8  -3.53224   GAGCCGGTGGCGAAA              CCAGCGC GCT GCGC-GG              TGCGGCTAACGACCT  58 332
        aspA 4255268 .. 4255294 - -12.4  -5.47159   TTTAACAAACAAAAA         GGCACATCGT TTTGATT ACGATGTGCC         TTTTACATCAGTAAG 100 489
        dcuA 4253883 .. 4253895 -  -3.3   -2.6381   ATAACGCCGATAGTA                GCACG TTC CCTGC                CCGGCTGGAGTTACA  42 36
        cutA NONE
        dsbD NONE
        yjdC 4250949 .. 4250976 -  -8.5  -5.50499   CCAGATTTAAAAAAA        CCCGTTGATAT TCAGTG ATATCATCGGG         TTTATTTAACGTACT 100 270
        cspB 4239365 .. 4239379 -  -8.5  -5.65177   ACAGGCATAAAAAAA               CCCGC ACAAG GCGGG               TTCTTTTCACAACGA 100 101
         tcp 4237190 .. 4237229 - -15.7  -4.25104   TTCTGGTCACTAAAA  CGCGATGCTGCGGGGCA GGCACT TGCCCCGCAGCAATGCA   ATCAGAAGGACTGCC 100 27
        glxA 4233952 .. 4233969 -    -4  -3.60296   CAGTCTCATCTCAAA             GCCGGG CCTCAT CCCGCC              TTTGGGCCGGGGCTG  52 347
        yajO 4231781 .. 4231798 - -11.3  -5.44119   GGCAGCGTAAAAAAA             GGGATGC CGGA GCATCCC              TTTCGCCTCAGGCTT 100 33
        oprB 4230211 .. 4230244 - -10.9   -4.4648   ACGTGCACGATAAAA     CCAGCCAGCCGGATG CGGT CACCTGCCCGGCTGG      CATGAAGGCGGAATC  91 39
    PAJ_3527 NONE
         pat 4228404 .. 4228424 -  -8.2  -3.05046   TCACCGCCTGAAAAC            GCCCGGCC TGCCG AGCCAGGC            TTAGTTTTCAGGTAG  63 26
        rbsA NONE
        rbsC NONE
    PAJ_3522 NONE
         gnl 4222535 .. 4222563 -  -4.7  -2.89102   GACCGAAAAATTAAT        CAATAAAAATCAG TAT CTTATATTTATTG        TCGGCTTTTGTGATC  47 139
        dlgD NONE
        yiaL NONE
        ttuB NONE
         lyx NONE
        sgbH NONE
        sgbU NONE
        sgbE NONE
        yagU 4215298 .. 4215310 -  -3.3  -3.33922   ATTTTGCCGAAAAAT                GGCGA CGA TCGAC                GGAGTTAGGCGCACA  48 112
        exoZ 4213848 .. 4213880 - -11.4  -2.52464   GCGTTCGTTAACGGA     GCAGTCCACCACGCTG CAA CAGC-TGGTGG-CCGC     CTTTACCATCCGTTC  67 205
    PAJ_3506 4205965 .. 4205977 -  -4.7  -4.79667   AAAAGTCAGGAAAAA                CCCTG AAT CTGGG                TTGGGGACAGGACAA  74 3
        mdtG 4202842 .. 4202860 -    -3  -2.70932   CCTTTTGGTTAATGA             GCCGATAA GGT TGAGCGGC             GACGTGCACGCCAGA  41 0
        yqjH 4201572 .. 4201593 -  -5.9  -3.97368   TCCTCAAGGCAGAAA           TCGC-CTGCA CAC TGCAACGCGA           GGTCTTCATCTAACA  66 361
        padC 4199922 .. 4199934 - -10.5  -5.75342   CTTTTTTAAAAAAAA                GGGGG GTT CCCCC                TTTAATAGCTAATTA 100 38
    PAJ_3498 NONE
       ethE1 4195651 .. 4195664 -  -8.1  -3.02144   GCAGGGCGCTGAACA               GCTGG AACA CCAGC                GGCGACAGGACCAGA  60 259
        dsbG 4194151 .. 4194182 - -10.2  -3.15663   ATCCAGGGGCAGGAA      CCGGCGGACA-GACA GAT TATCTTGCCCGCCAG      GCTGCGCTACCGTTC  68 63
        yghU 4181243 .. 4181262 -  -6.3  -4.36914   TTCTGGCGGAGAAAA            CACGGGC GTTATT GCCCGGG             TCGCGAGCATGCCGT  74 421
        yeaU 4177394 .. 4177429 - -12.7  -3.73068   CCTGCAATTGAACAA   CCTGACGATTCAGCGGC CTGA GCCGCTG--CCGTCAGG    CTGGCATCCGGACAG  85 64
    PAJ_3479 NONE
        lacK 4170412 .. 4170424 -  -6.2  -3.23216   GTCCAGCAGGATGAA                GCGG GCGGT CCGC                TAACGTTGCAGGCGC  55 386
        yjhC 4167250 .. 4167264 - -12.8  -5.84381   GGAGGAATAAAAAAA               CCGGCC TGA GGCCGG               TTTAAGTAGGGTACC 100 98
    PAJ_3474 4165943 .. 4165957 -  -4.3  -4.34771   GAAAACTCAGGAAAA               CAATC AGATA GATTG               TTGTCAGTCATAAAG  65 239
         gcd 4163479 .. 4163496 - -12.7  -5.64274   GCAGGCATAAAAAAA             GGCGGAC CGGA GTCCGCC              TCTGTTCAGGTGTTA 100 42
        qseB NONE
        qseC 4158238 .. 4158250 -  -7.7  -2.70525   TGTTTGGAAATCAAT                CCCAA AGG TTGGG                CAGTAATGTACTCAG  58 211
         tsx 4157242 .. 4157273 - -13.1  -3.35597   TGCAGTCTGTAAAGA      CG-CGAGGCCTTCC TCATG GGAAGGCCTCAACG      TTTGCCGCCACCTCT  87 61
         tar 4154548 .. 4154566 -  -4.5  -3.89346   CGGTCAGGGCACAAA            GGCG-CGG TCAG CCGTCACC             ACGATTGGCGGGCCG  59 127
        yyaJ 4152537 .. 4152549 -  -3.3   -4.3739   CAGCCTGCCATAAAA                CCGAT GGC AGCGG                CTATAAACGCTTCTA  64 379
        sbmA 4147464 .. 4147495 - -14.5  -3.30124   CTGGATTCGCGATAA      TTTGCCTGCGGCA TGAGGC TGCCGCAGGCGAA       GAGCCTGGTTATGAC  93 34
    PAJ_3457 4143988 .. 4144007 - -13.6  -3.84825   GCCAGCGAGATTAAA            GCGCTGGT TGAA ACCAGCGC             CAGCCGGGTCAATTC  88 299
         acs 4136030 .. 4136046 -  -2.2   -3.6393   GTGACTACAGAAACA              CACTAC GTAGG GAAGTG              GTGGCGGAAAGCCTG  50 59
        yjcH NONE
        actP 4133919 .. 4133944 - -16.1  -4.82901   GTGGCCTGAGAAAAA         GGGCAGGGACC TCGC GGACCCTGCCC          TTTTTTTATGCCCGG 100 50
        ywbI 4130624 .. 4130637 -  -8.1  -3.26164   AGACGATGGATAAGA               GTGCC CATC GGCAC                GAACTTCAGCATGCA  62 441
        soxS 4125691 .. 4125720 - -13.5  -2.83403   GTTGGGGCACTAAAT       GCGGCGTGCGCCT GGGC AGGCGCACGGAGC        GCGTCAGCTAACCGG  85 29
        yjcB 4125158 .. 4125190 - -16.5  -3.32498   GACGCTACACAGCAA      TATAAAAAACCCCGC TTT GCGGGGTTTTTTATG      AGTTTATCAGGGCAT 100 32
    PAJ_3434 4118891 .. 4118927 -  -2.3  -3.62224   ATAGTCGGCTAAGAA   GACGTGTGCCGATCAA ACGACG TTGAGCGG-ACAGGCC    TCAGCGCCATTCGGC  50 26
    PAJ_3433 4118198 .. 4118213 -  -7.5   -4.4009   TTCTACCCTATAAAA              GCCCC CTTACC GGGGC               TTTTTGTTTTTCTGC  76 71
        uvrA 4114534 .. 4114564 -   -17   -3.6608   ATGAGTGCATTTAAA       GAACGCCGCAAC TTTATCC GTTGCGGCGTTC       TGTTATTTTTCCAGC 100 28
        yahK 4112185 .. 4112213 - -15.4   -3.4072   GATGCCGGACGATAA        CTGCCCTTTCCC GAGGT GGGAAAGGGCAA        ACGGCAGGGTTATGC 100 35
         qor 4106136 .. 4106161 - -11.9  -5.34655   GAATGAAAAATAAAA         GAAGGGCTTCC TGCG GGAAGCCCTTT          TTATTTCACGGAATT 100 31
         zur 4102156 .. 4102172 -  -9.5   -4.1673   GAAGGTTCTAACAAA              GATTACC GCT GGTAATC              ACGCTTTTCAGGGAC  83 94
        plsB 4096669 .. 4096687 - -11.7    -5.252   CACGCGGATAAAAAA             GGCGACC TCAAT GGTCGCC             TTTTTCGTTGTCGCT 100 47
    PAJ_3410 4093145 .. 4093177 -  -4.8  -2.87132   GGGCTGCGGGAGATA     CCCGGTTGCTGACCC TGGC AGGTCAGC-ATAGGG      ACGGGTTTAAGACGT  47 84
        yjbB 4091189 .. 4091208 - -10.6  -2.67705   GTACAACCGACATCA            CGGGGGCC GTAT GGCCCCTG             TAAATTAATCCCCGT  69 30
         pgi 4086387 .. 4086404 -  -9.1  -5.60689   TCATAGAATAAAAAA             GGCGACT AAAT AGCCGCC              TTTTTGTGCCTGTGG 100 45
        yjbE NONE
        ymcC NONE
        ymcB NONE
        yjbH 4081911 .. 4081934 -  -8.8  -5.52384   CGCCGACTAAAAAAA          CAAGGCAGCC TGAT GGCTGCCTCT           TTTTTAGTTAAACCG 100 29
        iclR 4076744 .. 4076766 -  -2.5  -3.55622   TGCAATTGCTGGAAA           CGATCCGCC GGCAG GGCGCGCCG           CTGATTACGCGCGAC  48 459
        uidB NONE
        uidC 4072325 .. 4072344 -  -8.6  -4.25104   CGGTTTTTATTAAAA            GTGACATC ATAC GATGCCAC             TTTTGAAACACCTGT  77 61
        uxuR 4070975 .. 4070990 -  -6.8  -3.46534   CAATGCGATCAAACA              GCTGGC TGCG GCCAAC               ATCTTTCCCGGCGAC  58 436
        purH 4054697 .. 4054707 -  -2.6   -4.3129   TACCGATGATTAAAA                 TTTT CAT AAAA                 GGCTCCACAGAATTA  62 38
        purD 4053398 .. 4053414 - -13.7  -5.10461   CTGAGGCAATAAAAA              GGGGCAC TGG GTGCCCC              TTTGATCATTATTTA 100 34
         rsd 4048232 .. 4048252 -  -7.5  -3.84451   GGCGTTAAACGTAAA            GCCCACTCA GCA TAAGGGGGC            TTTTGGCTAATCACA  69 64
        thiC NONE
        thiE 4045276 .. 4045309 -  -5.9  -5.67063   CTGAGCATAAAAAAA     CCGCGC-CAGCCGTAA TAC TCATTGCCGTGCGCGG     CTTTCCACTCTTTAA 100 393
        coaA 4026878 .. 4026903 -   -12  -5.26119   GTTTGAAAAATAAAA         TAAAGCCTGC TTTTTG GCAGGCTTTA          TCGCCACCTGTTATT 100 36
        fadB NONE
        fadA 4011487 .. 4011505 -  -9.5   -5.5112   CGCAGCAAGAAAAAA             CCCGCCC CTGAC AGGCGGG             TAAATCCCACAATAA 100 53
        rfaH NONE
        ysgA 3999026 .. 3999058 -  -8.9  -4.07687   ACTGCGGCCTGAAAA      CCCGCGGCTGGCGCG AAA CCCGACAGGCGCTGG      CTAACATGGTCAAAG  75 136
        metR NONE
        yehS 3995069 .. 3995081 -  -4.7  -3.10499   CAACAGCGCAAGATA                GTCCG TGG CGGGC                CTTGCCAGCGAGTAA  50 159
        glpT 3992492 .. 3992507 - -11.8  -3.40403   TGCGCCGGAGCAGAA              GGCCGG TTAA CCGGCC               TTCTGACGGCTAGGC  82 35
        rhtB 3989388 .. 3989412 -  -3.5  -4.09685   TCTGATTTTGCAAAA          GATGGCCTGGC TAC ACCAAATCATC          ATGGTCGGTGGCGGA  60 504
        yigI 3985748 .. 3985777 - -12.2  -3.42699   ATTCAGGCAGGATAA       CGCGTGGCAG TACTCAAACG CTGCCACGCG        TTCAGTTCTGTGATC  85 39
        ytfH 3984530 .. 3984540 -    -4  -3.35679   GCTGGGTATCCATAA                 TTCA TCC TGAA                 AATTTGTACTGTACC  50 133
        rarD NONE
        hemC NONE
        hemD NONE
        hemX NONE
        hemY 3968586 .. 3968599 -  -9.5  -5.76633   GCAGACACAAAAAAA               CCGGG CGAG CCCGG                TTTTTTACTTAACGC 100 93
        rhlB NONE
        gppA 3949225 .. 3949246 -  -8.7  -4.28018   AAGAGCGCATGAAAA           CCGGCCA GAGTCGGG TGGCCGG            ATTACGTGCAATGCT  79 79
        ppiC 3946493 .. 3946513 -  -7.5  -4.24002   TCTTAAACTGCAAAA            CGGTCTGGC CAC GCCAAACCT            GTTCGTGTTCGATAC  74 345
        kdgK 3942739 .. 3942750 -    -3  -2.59177   ATGCGACAGAGCAAT                TATG CAGG CATA                 TCTTCCTGCGGAATA  41 13
    PAJ_3297 3941861 .. 3941873 -  -7.7  -4.07568   TCGCGGCCGTGAAAA                CAGCA TCC TGCTG                TCGCTGTTTAAAAGA  73 380
        xynB 3940896 .. 3940914 -  -7.4  -3.26471   CCAGCCGGACAGTAA             CGCTGC CGGTGAT GCAGCG             CCACCGACCTCCTGA  60 45
        spoT 3912125 .. 3912137 -  -3.3  -2.53876   GCTGATCGTAATCGA                TTGGG GAT CCCCA                GGTCGGGCTTATCGT  42 278
        tnaA 3910063 .. 3910085 -    -7  -2.53995   AGGCAGGGTAATGGA           GCAGCCGT GGCCAAA ACAGCTGC           TCACTGTACAGGTAT  56 43
        tnaB 3908531 .. 3908545 - -11.4  -4.07568   TTTCTTCGGTTAAAA               GCTGGG AAG CCCAGC               GTACGCGTCCTTCCG  86 223
        yiaF 3906503 .. 3906531 - -14.6  -4.90013   TAATTTAATGAAAAA        CGGGCCGGATCA CATTT TGATCAGGCCCG        TTTGAATGCGGAATC 100 95
        mtlA 3904190 .. 3904211 -  -9.4  -5.00616   TCCGCCCCCAAAAAA           TGGGACGG GCACAA CCGCCCCA            GGGAAATGTCGGACC 100 44
        mtlD NONE
        mtlR 3902352 .. 3902369 - -12.7  -3.06515   GGTTAGCGTGAAAAG             GGGAGCC TTGA GGCTCCC              GGCGGGATTTAGCTG  83 34
        yibL 3901883 .. 3901899 -  -3.6   -4.2558   TACTGGCCAGCAAAA              CAGCGA TCGGG CCGCCG              CCTGAAACATGATCA  60 38
        fdhE NONE
        yibF 3896824 .. 3896834 -  -2.4  -3.43961   TCAGAATACGCATAA                 CGCC GCT GGCC                 CTTCAGAAACCCGGC  45 67
        mipA 3894654 .. 3894671 - -11.3  -4.12188   CGACGATGTTGAAAA             GGGACGA GAAA TCGTCCC              TTTTTTATTCTGTGT  87 215
        yiaH 3890361 .. 3890380 -  -4.8  -2.60555   GAACCTGACAACCTA            GCCTCAGG TTAC CCAGTGGC             GCCTGTCCAGCCGAC  46 9
        yieG 3888150 .. 3888171 -  -4.3  -4.86001   ATGACGGGACAAAAA           TGATGCGTC TGAC GACGCTGCA            TGGACGCGCGCTGGC  78 90
        dnaA NONE
        dnaN 3879493 .. 3879509 -  -2.2   -4.1552   CACTGCCCGAATAAA              GCCCGT GTGCT ACAGAC              GCATCGGCATGACGA  57 18
        recF NONE
        gyrB 3875807 .. 3875824 - -11.3  -6.06723   TCGGGCAAAAAAAAA             CCCTTCC GGTG GGAAGGG              TTTTGTCTGTCGCAG 100 46
        yidA 3874793 .. 3874820 -  -2.6    -3.767   TATTTACCGATGAAA        CGGC-AGCGTCAG GTG CTTTCACTCGCCG        TTTCATCCTGCGTCA  51 49
        yidR 3873101 .. 3873126 -  -4.7  -3.72695   ACGCTGGCGAGCAAA         CTCAG-CCAGGT GTG ACCAGGACTGAA         GGGATGACGATATGA  57 380
        ibpA 3872382 .. 3872407 - -16.2  -5.28176   CGTATCCATAAAAAA         CGGCCACAGC ACGTAG GCTGTGGCCG          TTTTCAAAATGACGT 100 57
    PAJ_3241 3869701 .. 3869716 -  -2.5  -3.90112   TGTTGTTGAACGAAA              CGCTG TCACTC CAGCA               GGTTGTCGGCGCTGC  54 177
    PAJ_3230 3858653 .. 3858673 -  -6.1  -3.14522   TTAACTTACACCGAA            CACCGGATA AAA TTTCCAGTG            CAGAAGCGGATATTG  55 148
        dnaT NONE
        dnaC 3857320 .. 3857342 - -11.3  -3.46336   ACGGTAAGGTAAAGA          GCTGGCCCGC GTTC GCGGGC-AGC           CAAATCAGTATTCAT  79 30
        xylR 3855920 .. 3855937 -  -6.3  -3.08312   AAGGCACTGACTGAA             CAG-ACGC GTA GCGTACTG             GACTCTTATGTCATG  52 86
        celA NONE
        celB NONE
        bglA NONE
        chbA NONE
        lamB 3849683 .. 3849698 -    -4  -2.56449   AGGGGATGACAACAT              GC-CGTT TGC AACGCGC              CAATGCCGATCGGCC  44 136
        citH NONE
        modA 3847111 .. 3847135 -  -3.5  -2.66272   CGGTAGTGAAACGCA         CCGTTG-GCC TGATCC GGCGCAGCGG          ACGCATTCAGTCCTA  42 67
    PAJ_3216 NONE
    PAJ_3215 3840655 .. 3840671 -  -2.1  -4.15565   CGCATTACGCTAAAA              CCCAGAG TGG CGCTGCG              TAATAAAGATGATGT  57 277
        xylA NONE
        xylB 3824008 .. 3824024 - -12.3  -4.52857   ATCGCTCAGATAAAA              GGGCAAC ATT GTTGCCC              TCGGGTTGGATTACT 100 39
    PAJ_3190 3810112 .. 3810122 -  -4.6  -3.12936   ACGTAAACTGGAAGA                 GCAC GGC GCGC                 TGGCTAACACCATCG  50 277
         kup 3794659 .. 3794683 - -15.8  -2.73124   CTGCACTGGTGAAAC          GCTGTGCCTG ACAGG CAGGCACAGC          CGTTTAAATCTCGAC 100 29
        ygiW 3792063 .. 3792082 -  -9.3  -4.78752   ATCAGAAGGTAAAAA            TGGACCG TCTGAG CGGTCCA             TTGGGGCAGAATCAG 100 37
        rbsD 3791487 .. 3791502 -  -3.2  -3.30159   GTAACGGTTGCATAA              TGGCCT CAGA AGGTCA               CACCTGCGCTCAGGA  48 15
        rbsA NONE
        rbsC NONE
        rbsB 3788064 .. 3788085 - -15.9  -3.11366   GGAGTCCAAAATAAG           TGCGCCACC GACG GGTGGCGCA            ATGCCCTGCTTTTCT 100 46
        rbsK NONE
        rbsR 3786115 .. 3786129 -  -2.8  -5.69262   CGATAAAAAGAAAAA               GGCT TAAACCG AGCC               TCGCGGTACCAGCTC  85 14
        yihD NONE
        rdoA NONE
        dsbA 3775519 .. 3775549 - -13.5  -4.17701   CGCACAAATTACAAA      TG-AAAACGCCAGC GTAT GCTGGCGTTTTGCA       AAAAACTCAGCGTAA 100 46
        polA 3772053 .. 3772079 - -18.8  -5.46657   CAGCCCAATAAAAAA         CGCCCCAGTCAC AGA ATGACTGGGGCG         GCTAAATTCAGCCAA 100 349
        yihI 3770266 .. 3770289 - -12.4  -2.71731   TTTACCTGTTAAGCA          TGGCATGCGC ATGC GCGCATGCCG           ATCAATACAGCTTAG  78 37
        hemN 3768661 .. 3768690 -  -9.9   -2.8071   GGAATAAGAAATCCA       CTGCCGGAACAGC GCAG GCTGCTCCGGCTT        TTTTATATGACGCGT  68 28
        typA 3762295 .. 3762312 - -12.7  -6.15828   CGCAGGAAAAAAAAA             GCCCCGT TTAA ACGGGGC              TTCCTACAGCGCAGT 100 40
        yihX NONE
         rbn NONE
         dtd NONE
        yiiD 3759162 .. 3759190 - -13.2   -4.1899   TCAGGTGAGGTAAAA       CACACAGGGCCGC AATC GCGGCCCTGT-CG        TTTAATTGATGCGCG 100 27
    PAJ_3142 3752538 .. 3752553 -  -7.6   -3.6422   TACCGGCTGAAAACA              TCAAGC ATGA GCTTGA               TCGCATGAAACTGAC  68 57
        yicF 3747997 .. 3748007 -  -4.6  -4.18018   TCCTGCTACTGAAAA                 CGCC TCT GGCA                 CATGAGCTGGTGATC  64 50
    PAJ_3129 3736551 .. 3736572 -  -5.7  -4.25681   ATCGAACTGAAGAAA           GTGGCGGCA GGCA TGACGCCGC            GTGGATTAGGCATCC  69 252
         rph 3734684 .. 3734701 -  -8.4  -5.71712   CCTCAGATAAAAAAA             GGCGAC TCTGCG GTCGCC              TGTTACTTTATTTTT 100 33
        pyrE 3733993 .. 3734013 - -11.8  -3.02263   ACAGCTGGTGTAACA            GGCAGGCG GGCAG CGCCCGCC            TGTAATCAGACGCCG  78 31
        radC 3730678 .. 3730696 -  -8.8  -2.75343   CCGAGATTCTCAAAG             GTGGCGTA GTA TACGCCGC             TCGGCCCAAGTGCTC  62 109
        rpmB NONE
        rpmG 3730074 .. 3730103 - -19.5  -4.08706   TGCGCATTACACAAA       CAAAAAACCCGGC CTGA GCCGGGTTTTTTG        CAGAAAACCAAAATT 100 39
        mutM 3728915 .. 3728945 -  -8.1  -3.45027   ACGCTTGATGAAAGA       GTTGCGCTGGCGC GTCAG GCGACCGCGCATC       TGGCGAACGTTGAGG  66 318
        rfaF 3722026 .. 3722064 -  -9.5  -2.80988   TCATAGCATCAATCA   GTCGTTCCCATGAACCG ATAAG CAGATCAAGGGAACGGC   ACGTTTTAAGCGTTG  68 116
    PAJ_3110 3719504 .. 3719516 -  -4.9  -4.13767   GGGGCCATTGCAAAA                CAAAA AAG TTTTG                GCAAATGCGCTATCC  61 73
         kbl NONE
         tdh 3710676 .. 3710710 - -15.1  -4.09739   TGAACTGTTCTAAAA     CACTCAGCACCAGGC ATTAA ACCTGGTGCTGAGCA     ATCACATTACGCAGA 100 75
        yibN NONE
        grxC 3707491 .. 3707518 -  -2.6  -3.17194   AGTCCTGTAAGTTAA        TATGTCTGGCGT AATT ACGCCTGAAGTA         ACGGATCTAAACCTG  45 12
        secB NONE
        gpsA 3705938 .. 3705953 -  -3.2  -5.24129   TCTCCCGATAAAAAA              GCGC ATTGATCG GCGC               TGCAGGTGATGATGC  79 54
        cysE 3704982 .. 3705003 -  -4.3   -5.0538   CCGCAGCGCAAAAAA           TCCGCATTC CGAT GATGGCGGA            AAGCCGTAGCATGAA  81 116
        cpxP 3701792 .. 3701810 - -14.6  -5.94713   ACCTGATAAAAAAAA             CCCCCTCA TCA TGAGGGGG             AAGACAGGGATGTGT 100 71
        ymdF 3700768 .. 3700807 - -15.8  -5.31456   TGAAGGGATAAAAAA  GTACTTCGCCCCGTC-CTC ATA GAGAGACGGGGCGAATTGC  CTACCTTGGGTAAGC 100 82
        fieF 3699624 .. 3699634 -  -2.4  -3.88062   AGATAGTATATCAAA                 GGCC TGC GGCT                 GAATTGATTCAGGTC  52 117
        pfkA 3698519 .. 3698541 - -11.3  -3.43117   ATACGGAAGGTATAA           GGGCATGCC TGAAG AGCATGCCC           GTTAATGCAGTGAAA  78 41
         sbp 3697383 .. 3697398 - -10.4  -5.64274   TCACGCATAAAAAAA              CCAGCG TTTC CGCTGG               TTTAGATTGTGTCAG 100 48
         cdh 3696530 .. 3696547 - -12.7    -3.484   TTGAGCACAGCATAA             GCGGCCT CATC AGGCCGC              TTTTTTTATGGGTTG  89 17
        yiiR 3694304 .. 3694318 -  -7.1  -3.14564   GTATGGGCTCATTAA               CCGGA CGTGT TCCGG               CATTAATCGAAAGTG  54 204
        emrD 3692090 .. 3692106 -  -4.4  -4.28548   ATTGAGGCAGGAAAA             GTCCTGC CCCT GCAGG-C              GATGGCGCGAAACGA  65 214
        yiiU 3688110 .. 3688139 - -15.9  -3.77607   AATAATGTCAGCAAA       CG-AAAACGGGTGC CAG GCACCCGTTTTTCG       CATTAGTTGAGGCTT 100 39
        rpmE 3680495 .. 3680510 - -10.4  -5.76633   TCAGACATAAAAAAA              CCCAGC CTGA GCTGGG               TTTTTCTTGCCGCCG 100 64
        metB NONE
        metL 3676260 .. 3676273 -  -9.5  -2.79796   TGTTAGGGCAGGACA               GGCGC CGAA GCGCC                TGGAGAAAAGCAACG  68 41
        metF 3675150 .. 3675167 -  -9.1  -3.41393   ATGAGACATTCAGAA             CCGACGC GGAC ACGTCGG              TTTTTTTATGGCCAT  69 43
        argC NONE
        argB NONE
        argG 3665677 .. 3665704 -   -17  -3.57561   CTTCAAGTCGTTAAA        CCAGGGGCGGCC TGAA AGCCGCCCCTGA         GGTCATACTGAGAGG 100 62
        argH 3664115 .. 3664138 -  -2.4  -4.52949   TCGCCAAAAAAAAGA          CGAGAAGCGCT GTC AG-GCTTCCCT          AAAACGCGTAGAGGG  63 166
        oxyR 3662658 .. 3662669 -  -5.8  -3.22886   ATCTGATAGAAGACA                TCCC GACC GGGA                 TCTATACCATTCCGG  54 361
        yijC NONE
        yijD 3660386 .. 3660405 - -13.6  -5.49809   TAAAGCGTAAAAAAA            CGGGAACC TGAA GGTTCCCG             TTTTTAATTACCGAT 100 33
        btuB NONE
        murI 3656008 .. 3656026 -  -7.4  -3.65426   TGATAAATTGTTAAA             GAGCAGTG CCA CACTTCTC             TGTGGCGCGGGCTGC  67 372
        yifE 3648670 .. 3648683 -  -5.9   -4.7254   AGCTTGCAGTAAAAA               GGGGC TTTC ACCCC                TTCTCGTTAATCGTC  78 32
        ilvG NONE
        ilvM NONE
        ilvE 3643682 .. 3643711 -  -4.9  -4.21812   CTCCAGTGAAAATAA       GTTCGCGGACATC CAGC GACATCCGCGCAG        GTCTGGTTATGCGTT  64 32
        ilvD NONE
        ilvA 3640213 .. 3640229 - -13.7  -5.60993   TTGCGTACAAAAAAA              GCGGCTC GGG GAGCCGC              TTATCAGTGCGTTCT 100 55
        ilvC 3637674 .. 3637697 - -19.6  -5.10064   CTTAATACATAAAAA          GGGCGCAGCC AGAT GGCTGCGCCC           TTTTTGCATGTGCTG 100 68
        ltrA 3630556 .. 3630571 - -11.8  -3.21872   GCTAAAGATACTCAA              CCCGGC TCAG GCCGGG               TTTTTTATCGTTTCC  79 48
        fabG 3626067 .. 3626083 - -15.1  -3.31322   CGGAAGCTGGCACAA              GGGCGGC AAA GCCGCCC              TAAAATTACAGCGCC 100 31
        yliJ 3623985 .. 3624009 -  -4.2  -4.26076   CCAGTTTCACGAAAA          CCGTTGCG CCCGATTTT CGCATCGG          CTGGATTGCAGCCGG  65 488
        yfiK 3622203 .. 3622236 - -11.1  -4.09685   CGGCAGCTCGCAAAA     CATCATCGCTACG TGCGCATT CGTGGCGATGATG      TGTCGGAAATCCAGA  87 81
        yebN 3618584 .. 3618596 -  -7.7  -2.88822   GGGGCGAGATAACGA                GGTGA TAA TCACC                GGTCAATCCCTGACC  59 256
        ycgM NONE
        bioH NONE
    PAJ_3021 3615050 .. 3615071 -  -3.8  -3.81951   CTGGATACCACCAAA           TCATTCAGC CTGGC GCTGA-TGA           TTTGCGCCTGCGTCA  55 113
        yjjN 3611379 .. 3611393 -  -5.6  -2.78384   CTTCGTGTCATTACA               GAAGGC ATT GCCTGC               GGCCAGACGGTGCGT  47 194
    PAJ_3014 3607710 .. 3607731 -  -2.1  -4.14739   TGATGCAGGGCAAAA           CGGTGATTG CCAT CGCCCACCG            CCTGTCCACCATTGC  56 173
        yhhY 3605331 .. 3605342 -  -2.2  -2.70774   GAGTTTAATCACAAT                CTCC CTCC AGAG                 TATCAGCGGGTGATA  39 158
        rpfG NONE
        kdpA NONE
        kdpB NONE
        kdpC 3599328 .. 3599360 -  -3.4   -4.2828   GCTCATCCATCAAAA     TTACTGCCG-GATGG CGCG CCAGCGCGGCATCAA      GGTCGAACTCCGCAT  60 316
        kdpD NONE
        yqhA 3596357 .. 3596378 - -13.7  -3.36515   CTTCAGGCTGAAACA           GGCCTCCCC CACC GGGGAAGCC            GTGGAACCAGACGGC  91 61
        ygaY NONE
       sod22 3592305 .. 3592321 - -10.1  -5.19261   AAATCCATTAAAAAA              CGCGCCA TTT TAGCGCG              TTTATTGGCGAATTA 100 417
        xynB 3590930 .. 3590944 -  -3.4  -4.08216   GCAGCGTGGCGAAAA               CCTGCA GGG CGCTGG               GAATTTTGCCGGGGG  58 319
        nagC 3582600 .. 3582636 - -16.6  -2.59431   TGCGCGCATAACGTA   GC-GCTGCCCGCTGACC CTGT GATCTGCGGGCAGCAGC    CTCAATTAAAATAGG 100 27
         rnz 3579756 .. 3579784 -  -8.7  -2.72144   CGACGCTGTTCAAAG        CTGAGGCGCACCC ACC GCGCACGCCTCTG        TTATGGCTGGTACCC  59 431
        prlC NONE
        yhiQ 3575055 .. 3575079 -  -3.3  -3.68529   ACCCTATCACCGAAA          CCCTGAGCGGC AGT GGCGACCTGGG          GCAGGTGCTGGTGGA  50 242
        uspB 3574025 .. 3574042 - -12.7  -2.62184   TTCGGCGGCATACCA             GGGCGAC TTCG GTCGCCC              TTTTTAATGCCAGAT  81 29
        yhiN 3571011 .. 3571032 -  -5.7  -3.65902   GTGATTTCAGGCAAA           CCGCCCGAG ATTG CCCATGCGG            ACTATGCGGTTTCGC  58 73
    PAJ_2975 3561074 .. 3561124 - -10.6  -3.36694   ACGTATTGGCAAACA CACTGCATCATCAATGCTATTT TGCATTC AGACAGCATTGATGGGGCAGTG AATACTTACGGACAG  75 54
        csgA 3560279 .. 3560325 - -10.8  -3.05597   TGGATGTTGCAAAAT TTCACGCTGACGGGCTGCCA TTATCCC TGTCAGCCCGTCAGCGTTGC TGCAACCTTTACCTC  74 39
    PAJ_2973 3559500 .. 3559510 -  -5.4  -4.18488   ATTTAGCGGAATAAA                 CGAA ACC TTCG                 GGGTTGGTCATTTAG  64 71
        uxuR 3550837 .. 3550857 -  -4.7  -3.08798   ACCTGGCATTGAAGA            CGCTAATCA GCC TGATCACCG            GCATCGCGGTCTGGC  47 448
        mmsA 3546380 .. 3546394 -  -7.1  -3.04144   CCTTTATCGTCAATA               CGCTG TCACT CAGCG               CCCACTCAACCCAAC  59 31
        iolB 3545416 .. 3545438 - -12.1    -5.252   GAGTTCCATAAAAAA           GGGTTCATG ATGAA CATGAACCC           CTTTGATCCCTGCCA 100 111
        iolC 3537523 .. 3537558 - -17.7  -2.78032   CCGCCCTGAAAACAG    CGAGCCGCGTGGAAA AGCACG TCTCCACACGGCTCG     ATTCTGGTTCTTTTC 100 39
        sirA 3535649 .. 3535674 -  -8.9  -2.82895   CGCGGGATTAACAAC         CTGACGGCGGC AGGT GCCGCCGTTAT          TCGCCCATCCCTTTC  65 22
        yhhM 3532104 .. 3532138 -  -5.5  -3.37344   TTCCCACGTAAGTAA     GTCGTCACGGCGGGC ACCTG GCCCGCCGTCAGTGC     CGGGCGGGCGTAAAC  54 19
        ftsY NONE
        ftsE NONE
        ftsX 3527542 .. 3527571 -  -8.5  -3.02829   GACAGCGGGGCAATA       TCCTCTGCACCCA TTGT CGGCAGCAGAGGA        TGATTATAACAAAAA  63 55
        rpoH 3526487 .. 3526505 - -12.4  -5.66338   AAAGACAATAAAAAA             GGGCGACC TGA AGTCGCCC             TGTCTCGTCAGGCTT 100 33
        livK 3524446 .. 3524471 - -13.3  -4.64846   TCAGAAACCAGAAAA         CCCCTCTCCTG CTAG CAGGAGAGGGT          TAGCAAGGCGAAAGC 100 109
        livH NONE
        livM 3522216 .. 3522229 -  -3.1    -4.183   TCAACGGCTAATAAA               GGC-TG ACT CATGCC               TGCTCTCCTTGTTTA  59 19
        livG NONE
        livF 3520682 .. 3520712 - -10.3  -3.86897   GGCAGCGCTGAGAAA       CAGCGCCCACACC TTTAC GAGGAGGGCGCTG       CCGGATCCTGGCCTG  82 63
        ugpB 3519131 .. 3519148 - -12.7  -5.00884   ACTTTGGGGAAAAAA             GGCCAGC CGGA GCTGGCC              TGCACACCGGATTAC 100 37
        ugpA NONE
        ugpE NONE
        ugpC NONE
        ugpQ 3515498 .. 3515533 -  -7.5  -3.06573   AGGAACAACGAGACA    GTGCCCAGCAGCGAGT GATTA AATCGCAGCCGGGC-C    AGCAGCAGAATCAAC  57 51
         ggt 3513287 .. 3513318 - -14.4  -3.95836   AGGGTGAAAACATAA      GATTACGGGCAGCC AAAG GGCTGCCCGTTTTC       ATCAGTAACCTGCGC 100 27
        yhhW NONE
        gntR 3510541 .. 3510558 -  -3.5  -3.36327   CCATGTTACCGATAA             CAATGGTG GAG CAC-ATTG             TCCTGGTGGCATTCC  48 105
        gntK NONE
        gntU 3508575 .. 3508618 - -12.7  -2.73542   CTGAAGTTGTAACCA TGGT-CGATTGTAACCGGGCA GCCC TGCCCGGTTACAA-CGCATCA GGAAAGCAGCGTAAA  81 23
         asd 3506614 .. 3506631 - -11.3  -3.61715   GATTTGTGGGAATAA             GACCGGA CAAG TCCGGTC              TTTTGATGCTTTCAG  81 43
        glgB NONE
        glgX NONE
        glgC 3500249 .. 3500270 -  -7.3  -2.56914   GACCTCATTAAGTTA           CCAGGCACGA TCC TCGTGCC-GA           TGGGTTGTGTGCCGC  56 48
        glgA NONE
        glgP 3495918 .. 3495931 -  -5.9  -3.53855   TTTCGGAAAAATATA               CGCCC TCAC AGGCG                AGGGTTTGCTCGAGG  59 424
        glpE 3493104 .. 3493123 -  -3.6  -2.71712   CGCGGCTGGTTAAAT            TGGGTAAT GCGC ATTACTCA             CTCTCCGTGTTACGC  42 49
        glpG NONE
        glpR 3491473 .. 3491492 -  -9.3  -4.58395   GGCAGGTTTGAAAAA            CGCCAGT GATCTG ACTGGCG             TGCAGGTCTCAGCAG  90 34
        malP NONE
        malQ 3486745 .. 3486768 -  -4.5  -4.09117   GGCATTGAGAAAGAA          CTGCTGGCGG CGTTC CCGC-AGCTG          AAAGGCGTGCGCGAT  61 117
        bioH 3484631 .. 3484671 -  -4.6  -3.52459   ACTAATCGCATAGAA GTGCAGCGGCCTTGC-TCA CTCA TGAAGTATTGCCGCTGCGC  AGAAATTTGCCAGTA  55 51
        yhcN 3484202 .. 3484239 -  -2.7    -4.386   TAAGCGGTGAGAAAA   TTG-ATGGCACCCAGC CAGTAAC GCTGGATGCCTGGCAA   TTCATGTGGCTACGA  62 44
        ompR NONE
        envZ 3476326 .. 3476356 - -19.1  -2.72344   CCTCAGCGTTAATCA      CAGCGGCGCGG-CT TAAC AGACCGCGCCGCTG       CTGTTTAACTCAGTG 100 30
        nudE 3469226 .. 3469237 -  -5.8   -3.3854   AACCATCATGGATAA                TGGC GAGA GCCA                 CGAACTGTTTTAATC  57 94
        yrfD 3465770 .. 3465783 -  -2.3  -2.71785   GGGTAAAAGATTAAC               CGCCA CCAT CAGCG                ATCCTCCTTTCGCAG  39 20
    PAJ_2896 NONE
    PAJ_2895 3464488 .. 3464504 -  -4.3   -3.7732   CGTTGAGATGAACAA              CTGCCCG GTA CTGACAG              CTCAAGGGTACGCGA  55 276
        hofQ 3462998 .. 3463016 -    -6  -3.53012   CCGTCGTTCGCGAAA             CTGTAATG CGT CAGTACAG             CGTTGTGACATTACG  59 160
        aroK 3462280 .. 3462290 -  -5.4  -2.74515   AAAGAGCCTTCAAAC                 GTTG GAT CAAC                 TTTTTTCCAACATGT  48 21
        aroB 3461105 .. 3461116 -  -7.2  -3.53012   TGCCTCCTCCGTAAA                GCGG CATC CCGC                 ACTGCGCACCTGCGC  64 68
        damX 3460005 .. 3460028 -   -16  -4.07885   GATCTGCGCTTAAAA          CGGGACCGGC AACG GCCGGTCCCA           CATCATTTATTGGCT 100 32
         dam NONE
         rpe NONE
         gph 3457718 .. 3457735 -  -6.9  -3.00946   TGTCCTGATAAATTA             CCGCCCG ATAG CGGGCAA              AAGTTCGTCAAAAGA  55 5
        trpS 3456652 .. 3456671 -   -15  -5.26119   GTGGTAAAAACAAAA            CGGCGAGC CTAT GCTCGCCG             TTTACATGCCTGACT 100 47
        codA 3454982 .. 3455003 -  -5.1  -4.60041   ACCGATTGTGAAAAA           CAGCGGCGTT CAC AGCGC-GCTG           TTAACCGCAAACGGC  73 156
        ppiA 3453045 .. 3453061 -  -2.3  -3.32946   GCTCTAAGTATAAGA              GCAAA TTTTCCC TTTGC              CGGAGACGAGATGGC  45 52
        yhfG NONE
         fic 3452197 .. 3452248 -   -10   -3.4252   GGGGATGCAGGATAA CCGGTTTC-TTGCAGGGCGACGCAC CTG GTGCGCCGCCCTGTGGCGTAAGCGG ATCAGGGGGCTTTGG  73 27
        pabA 3451503 .. 3451519 -  -3.7  -2.91703   AAAGGCAAACACAAC              TTTACTG GTG CAGGAAA              TTAGCCAACAGCTGG  43 10
        argD 3450145 .. 3450163 -  -8.8  -2.70932   TCTGGCCTGGAACCA             GCGGCC TCATCAT GGCCGC             TGGCTGTTGCGCAGT  59 57
        yhfA 3446692 .. 3446714 - -13.5  -4.68384   ACGCATTGAATAAAA           TCAGAGGCC GCGCT GGCCTCTGA           ATAATTACAGCTCGA 100 30
        yfiK 3443750 .. 3443765 -  -5.4   -2.8007   GCAACCGATGAATGA              GCTG-GG CGC CCGCAGC              GTACAGTTGCTGCTG  47 121
        tauA NONE
        tauB NONE
        tauC NONE
        tauD 3439074 .. 3439097 -  -4.6  -4.82901   GCCGCGCTACAAAAA          CA-GGCCGA GAGTAAA TCGGCCCTG          GAAGAGGTGGAGATG  74 154
        kefG NONE
        kefB NONE
        yheV 3434441 .. 3434455 -  -4.2  -3.46509   GTGCAATAACACCAA               CCAGAA AGG TTCGGG               GCTGAGTACAAGAGG  52 139
        slyD 3433771 .. 3433797 - -11.7  -4.76041   GACAGGCAGGAAAAA        GT-AAGGCCACC CGGA GGTGGCCTTGAC         ATGCAGATTTGAACT 100 40
        fkpA 3432374 .. 3432393 -   -15  -4.40003   TGTCATAAACAGAAA            CCGCCACC CGAA GGTGGCGG             TAGACAGATTACTGC 100 34
        yheO NONE
        yheN NONE
        yheM NONE
        yheL 3430401 .. 3430418 -  -9.9  -3.12104   ACACGTAATAAATCA             CCTCGTA GAAT TACGAGG              AGGCAGAATTTTAGG  70 85
        rpsL NONE
        rpsG 3429353 .. 3429387 -    -4   -4.2528   TTCTAAGTTAATAAA     GCCCAGCAGGTAAGCC ACT GGGACGCCCGCTGGGT     TAATAACACCTACGC  62 46
        fusA 3427193 .. 3427212 -  -5.7  -3.85165   CAGTTCAAATTTAAA            CCGTAGC TTATTT GCTACGA             GCTTCAATAACGGCC  64 13
        tufA 3425881 .. 3425900 -   -10  -5.81032   TAAGCCCAAAAAAAA            GAGAGCAC CTAA GTGCCCTC             TTCTGTCTTGCTGTG 100 72
         bfd 3425565 .. 3425584 -  -4.2  -3.73224   TCATGTCCCAGGAAA            GAAAGCGC TCAG GCGATCTC             TTTATACTGCGGAAC  55 14
         bfr NONE
        rpsJ NONE
        rplC NONE
        rplD NONE
        rplW NONE
        rplB NONE
        rpsS NONE
        rplV NONE
        rpsC NONE
        rplP NONE
        rpmC NONE
        rpsQ 3418830 .. 3418853 - -15.4    -5.252   GATGGGTAGAAAAAA          TGAACGGCTC TTGC GAGCCGTTCA           TTCGATTTTTAAAGA 100 53
        rplN NONE
        rplX NONE
        rplE NONE
        rpsN NONE
        rpsH NONE
        rplF NONE
        rplR 3415813 .. 3415823 -  -3.2  -3.32963   ACCTCTACCTTAGAA                 CTGA AGG CCAG                 CTTCACGGGCAGCAT  48 9
        rpsE NONE
        rpmD NONE
        rplO NONE
        secY 3413335 .. 3413345 -  -2.4  -2.61452   ACCACCTGAATTAAC                 GGCC GTA GCCC                 TTCAGGTTAGCTTTC  39 10
        rpmJ 3413124 .. 3413153 - -12.3   -4.6645   TACAGACATACAAAA       GATTG-GCTGGCTA ATC TAGCCAGCTCAACC       CGACTTTGCAAGAAA 100 53
        rpsM NONE
        rpsK 3412267 .. 3412285 -  -4.4  -5.07053   AACTATCCTAAAAAA             CGGGGCGT TAT ACGCGACG             TTTTTTCGGCGGACG  77 14
        rpsD 3411616 .. 3411634 - -10.4  -3.14132   TCTCTTTGGTACTAA             GCTTTACT TGG AGTAAAGC             TCGACGATCAGGTGT  73 10
        rpoA NONE
        rplQ 3410144 .. 3410157 -  -9.5  -5.60689   GCAGACAATAAAAAA               CCCGC CGAA GCGGG                TTTTTCACGTTGCAA 100 45
        yhdN 3409658 .. 3409679 -  -2.2  -4.14627   TGTTGATAGAAATAA           GGCTGTTA AAGATG CAGCAGCC            ACTATTATACGCGGA  57 61
        yhdL 3409326 .. 3409339 -  -3.1   -3.5394   AAACCGGCCCCCAAA               CCTTC AAAC GAAGA                ACTGCTTCTGACCGA  48 55
         smf NONE
         smg NONE
        yrdD NONE
        yrdC NONE
        aroE 3400885 .. 3400901 -  -6.5  -3.53343   AATTGTTGGTGTAAA              GCCGTCA CAC TGATGGC              ACAGGTTAGCCCCAT  61 121
        yhdA 3377980 .. 3377993 -  -2.3   -3.6392   CATACTAAAGGATAA               TCCTG CAAG CTGGA                GGCGGAAAATAAAAT  50 309
        mreB 3376808 .. 3376832 - -10.8  -3.25072   TCGACTACAAGGTAA          GAAAGTACGG GCGGG CCGCACTTTC          CTGGGCTGGTCACAT  76 117
        mreC NONE
        mreD NONE
        yhdE NONE
        cafA 3373024 .. 3373041 -  -4.1  -3.31792   CGAGCAGCGCCACAA             TCACAAC GACT GTCGCGA              GCAGCAGTAACAGAA  50 192
        yhdP 3369209 .. 3369221 -  -3.3  -2.82623   GTGCTCGGATAATCA                TAGCC TGC GGCAA                TTATGTTACGCCGTC  43 46
        tldD 3367702 .. 3367717 - -11.8  -4.87318   CGCAAAAGCTAAAAA              CCCGCC AGTT GGCGGG               TTTTGCGTCTCGGTC 100 39
        aaeX 3366360 .. 3366370 -  -2.4  -4.78326   CCTCAAACAAATAAA                 CGGG ATA CCAG                 ATAAAATACACAGCA  67 2
        aaeA NONE
        aaeB NONE
        gabD 3361748 .. 3361760 -  -4.1  -3.54424   GCGTACGCCTTTAAA                GCAAA GCG TTCGC                AAAATTGCCGTAAAA  52 145
        yhcO 3361452 .. 3361466 -  -2.8  -4.15833   AGCACGACCTGAAAA               TGCTCA GCG TCAGCA               AACGGTGACGTTGCG  59 108
        yfcI 3359930 .. 3359944 -  -6.4  -3.61589   TGAACATCAAATCAA               CCATCG CAA CGATGA               GTCTGCTCTCCGTGA  61 518
         mdh 3356714 .. 3356732 -   -16  -5.60993   CGGGTTATAAAAAAA             CGCCCGGT CTG ACCGGGCG             TTTTCCTGTTCGGGC 100 49
         orn 3350204 .. 3350235 -  -5.2  -3.48024   CTGTAGTACTAAAGA      TCATCATC-CAGCCT GGC AGGCTGCGACAAAGA      AAGTGACAAAACTGG  56 470
        yjeF NONE
        yjeE NONE
        amiB 3345079 .. 3345096 -  -9.8  -3.28712   CCTTGTGGCTGACAA             CCCGGC ACGGCG GCCGGG              CTAACAATCAGGATG  73 33
        mutL NONE
        miaA 3342232 .. 3342249 -  -4.1  -3.83561   GGTTCTGAAAAAAAC             TGCGTAA AAAT TTGCGCA              CGTAACTTGCCAATT  57 49
         hfq 3341803 .. 3341840 -  -8.6  -4.96848   TCGCTTATATAAAAA   GACCAGGAT-GGAAAAC CTGAC GCTTTCCGATCCTGGTT   AAACGGTGCCGCCTT  88 39
        hflX 3340482 .. 3340503 -  -2.3  -3.27215   AAATCCTCAGAGTAA           GTTCGATTT GGCA ATATCAAAC            AATATAACTGGTCAG  45 20
        hflK NONE
        hflC 3338053 .. 3338072 - -13.6  -5.81412   TGCATCCAAAAAAAA            GGCCGACA ACAT TGTCGGCC             TGTTAGTTATATCAG 100 44
        yjeT 3337812 .. 3337830 -  -3.1  -2.69468   GAGGCTGAGATACCA             TTCAGAC GGCGA GGCTGAA             CGCATCAGAGTTCGC  41 30
        purA 3336338 .. 3336364 -   -10  -5.06585   CAAATTACATAAAAA         CAAAGGCCGGAC AAT GTCCGGCCACAG         GATGATTATGCGTTG 100 31
        yjeB NONE
         rnr 3333218 .. 3333243 - -16.9  -3.46205   GAAATGAATGGATAA         CAGCCCCTGCA TGCA CGCAGGGGCTG          ATGTGCGCATCAGGC 100 35
        rlmB 3332403 .. 3332413 -  -6.8  -3.10164   TCACTCAGTATGTAA                 GGTG AGC CACC                 ATTATGACCGGACAG  57 63
        aidB 3330309 .. 3330326 -  -4.1  -3.83188   CACAGGCAGAAAACA             CGGCCCAG AGC CTGAGC-G             ACAAGGGACATCATT  55 436
        yjfP 3327448 .. 3327505 -  -3.9  -3.65902   GGGATTTCATTTAAA TTGTCGGGAGACGCCCGCTTTCCGCCC TTGT GTGCGGAAAGCGGGAATACAGAGGCAA ACAGAGGCTGAAACG  55 62
        rpsF NONE
        priB NONE
        rpsR 3326313 .. 3326341 -  -6.8    -3.281   CGTTAATGGACAACA       GCCGT-TACTGAT GACG ATCAGTGTACGGC        AGCAGAGACAGGTAA  59 1
        rplI 3325784 .. 3325803 - -13.6  -5.45802   TCGTTAAAACAAAAA            CGCCGACA CTAG TGTCGGCG             TTCAGGTGTGGCAGG 100 51
        fklB 3322922 .. 3322938 -  -4.4  -4.26903   CTCACCGGATGAAAA             CCGCTCA ATCC TG-GCGG              CCTATATCAGCGCAG  65 289
        cysQ 3320151 .. 3320181 -  -7.5  -3.09516   TGTTGCAGGACTGAA       GGCGGGAAGCG GGAGGGCTG CGCCTCCCGCA       CTGGGTTAAAACAGC  59 31
        ytfK 3319049 .. 3319065 - -15.1  -3.51406   GAGTAGAAACACTAA              GGGCGCC AAC GGCGCCC              TGTTATTTAGTTGAA 100 32
        ytfM NONE
        ytfN NONE
        ytfP 3311298 .. 3311320 -  -9.2  -4.82518   AAAACAGGAATAAAA           GGGTTCATCA AGA TCATGAACCC           TTTTATCTGAATGGC 100 73
    PAJ_2737 3309469 .. 3309492 - -12.5  -2.87132   TTCCTTTGTCATACA          TACAGGCCC TGCTAC GGGCCTGTA           TTTTTTTGTCGTTAT  80 71
         tar 3306077 .. 3306095 -  -8.8  -3.45839   AGGGCTAAACATCAA             GGGCGC GCGTGAT GCGCCC             TTTTTGCGTTACGAC  69 34
         mpl 3303382 .. 3303398 -  -3.6  -4.93365   GCGCAGAAGGAAAAA              GCCGGT AACAA ACCGCC              AAAATCTGCCCGTCA  76 166
        pmbA 3301402 .. 3301421 - -10.7  -5.60993   CTTTTTATAAAAAAA            CGGAGGG TCGATG CCCTCCG             CTTGCTATCGCATAA 100 58
        cybC 3300944 .. 3300959 - -11.8  -3.39895   GCCCTGAGCAATTAA              CCCCGG CAAG CCGGGG               TTATCGGTAAAATTA  82 38
        yihU NONE
        yihT NONE
        yihS NONE
        yihR NONE
        yihQ NONE
    PAJ_2721 3292088 .. 3292099 -  -5.8  -3.05384   CGCTGCCCCACTGAA                CCTG TCAG CAGG                 GCCGCTTTTTCAGGA  53 35
        yihP 3290668 .. 3290683 -  -3.2  -3.89617   AGTCACAAAGCCAAA              TTAGCG CTGA CGCTTA               CGTGCATCGATCTCC  55 10
        yihO 3289119 .. 3289164 -  -6.2  -4.89838   GGAATAAACAGAAAA CCGGGTTGCTGGTCAGCC-GTC ACAA AACTGGCAAAC-AGCAACCCTG AGGGCAAGGTAACAG  81 47
    PAJ_2718 NONE
    PAJ_2717 3286390 .. 3286404 -   -10  -3.14931   CCGATCGGGCATTAA               CGCGAT CAG ATCGCG               ACCGGAAAAATCGCG  70 16
    PAJ_2716 NONE
        selA NONE
    PAJ_2714 3283299 .. 3283331 -  -9.1  -4.09243   CAGACTGCCGGAAAA     CAGGCG-GCAGGTC TATTAT GCCCTGCGCGCCCG      TAATCTGTCCTTGAA  78 60
        licR 3280990 .. 3281010 -  -3.1  -4.08767   GTCACCCGGGTAAAA            TATCGCGGC ATT GCCGTGGCA            GATACGGCCCGCGAA  58 344
        yhaK 3279423 .. 3279445 - -11.3  -4.60797   GGCGCAGACAGAAAA          GCCGC-ACCC TGTT GGGTTGCGGC           TTTTTTATTGCGGGT 100 148
        yraL 3274403 .. 3274418 - -11.8  -5.18355   GCCAAAAAGCAAAAA              CCCCGC TTGC GCGGGG               TTTGCATTAAGAAGT 100 477
       opgD2 3272312 .. 3272338 - -11.7  -2.78032   GTCGCGTTAAAAGAT         TAACGCCCATC TGTTC AATGGGCGTTA         TTTAAAAGTTATTTC  76 34
        tdcB NONE
        tdcC 3269231 .. 3269267 - -17.4  -4.14511   AATTGGATGTGAAAA    GACCTGACGTGCGCTG GCTAA CAGCACATGTCAGGTC    AAACAGGACTGAATG 100 45
        arnA 3266550 .. 3266572 -  -2.1  -4.72846   TCAGATACTGAAAAA          GC-TTCT-CTG CGG CAGGAGAAAGC          TGAACTCGAGGCCGA  69 498
        uxaC NONE
        uxaB NONE
        uxaA 3255006 .. 3255025 -   -15  -4.75356   AAACACAGTGAAAAA            GGGCGGCA GACA TGCCGCCC             TTGCGTTTACAGCGT 100 32
        ynfJ 3250609 .. 3250621 -  -2.6  -4.56775   ACTGGCGCTGAAAAA                CCGC TACAT GCGA                AATGCTCCGCCGATC  65 346
        ygjO 3249161 .. 3249173 -  -3.3  -3.05715   AACCGGTGCAGGTAA                TTGGC GGG GCCGA                TGTGGCGCAAGAGCT  43 93
         hel 3245396 .. 3245416 -    -9  -4.67755   ACAGCGATGTAAAAA            GAGCCTAC TCATT GCAGGCTC            TCTGTATTGACACAT 100 40
         can NONE
        ychM 3242693 .. 3242713 - -12.7  -6.02919   TTACAAATAAAAAAA            TCGGATATC CGA GATATCCGA            TTTTTCACGTTTTGT 100 63
        yneF 3241016 .. 3241028 -  -5.5  -3.15574   GGAACGTCATCAACA                GAACG CGT CGCTC                AAAACCAGCGTTAAT  52 62
        pleD 3237154 .. 3237184 - -10.4  -3.24232   GTGCCTGGAAACAGA       GCGCATTGTGGAAA GCC CTTCCGCCATGCGC       GGACTTGAAATGCTT  70 396
         tcp 3233848 .. 3233866 -   -11  -5.67283   AATGCAAACAAAAAA             CCCCGCAT CCA ATACGGGG             TTTTAAAAGGCATCG 100 112
        yciR 3230459 .. 3230486 -  -3.2  -5.93809   CGCCGACAAAAAAAA        TGCCCGCACCTC GTTA AAGGGTCGGGCC         GGAGTTCTCAGGGAA  95 410
        ycgZ 3228350 .. 3228362 -  -2.6  -3.48395   ATTGTGCCCATACAA                CCGG GCAAA CCAG                CCTCAAACGCTCAGG  49 201
    PAJ_2667 NONE
         tar 3221915 .. 3221950 - -14.8  -2.88544   CCTCAGGCGCATATA    GCCTGACTGACCGC ATAAATGA ACGGTCAGCCAGGC     GTGACGCATCGCTTC  90 50
        ybaR 3220014 .. 3220034 - -16.9  -2.76418   GCGTGACAGAAAGAG            CGGGCCTGA ACA TCAGGCCCG            ATGCGGTTAATGTCC 100 32
        licR NONE
        hrsA NONE
        fruA NONE
        fbaA 3215425 .. 3215453 - -15.9  -3.31799   CAGAATGCGGTACAA        CGCGGGCCGCCTG CCT CAGGCCGCCCGCT        CCGCTCTTAGCGGCA 100 138
    PAJ_2659 NONE
    PAJ_2658 NONE
    PAJ_2657 3213465 .. 3213475 -  -3.2  -3.17723   CCACGGGTAAGCGAA                 CGAC ATC ATCG                 CGTATTCCCGTAGTG  46 20
           A 3211193 .. 3211212 -  -5.8  -4.41348   CCTCCCCCAAATAAA            TACTGTAC ATAC ATACAGTA             TCATAGCATTCGTTA  72 223
         tum 3210874 .. 3210885 -  -3.6  -4.42653   ATGTCAGCGATAAAA                CGCA CTGG CGCG                 GTTTTGCTGTTGCCC  63 118
           X 3210023 .. 3210047 - -10.7  -3.57144   TGTGTGACGTCCAAA          CCACATCAGGA CGA TCCCGATGAGG          TAATTAATCAGAGAA  79 60
       nucD3 3209332 .. 3209343 -  -5.8  -4.56133   GGGCAATAAGCAAAA                TGGC GATC GCCA                 GTGCAAGCAGTCGCA  75 41
           R 3208307 .. 3208324 -  -2.6  -4.46212   CGTTGCAGGAGAAAA             GCGGCA ATCGAA TGCCGT              TTACCCAGGGATGGC  62 72
           V NONE
           W NONE
           J NONE
           I NONE
           H NONE
    PAJ_2646 3203740 .. 3203765 - -15.5  -2.54523   GCATATGCGAATTCA         GTAGCCGTCGA AGTA CCGACGGCTAC          TAGCATATACCATCT  95 422
    PAJ_2645 3202258 .. 3202299 -  -4.6  -3.13504   CCGTGATGAAAATCA GACA-TCTGTAGCACTCC GTGTTGTG GGTGTGCT-CAGAGTGTC AGGTCAGTGAAAAGG  50 69
          FI NONE
         FII 3200537 .. 3200561 - -11.3  -2.54574   CATCCCAATCAAGAG          GGGCCAGCGCA GGA CGCGCCGGCCG          TTGTTATTACACCAG  72 32
    PAJ_2642 NONE
    PAJ_2641 NONE
           D 3196143 .. 3196157 -  -3.6  -3.85724   AAAAAGCAACTTAAA               TTAGAC TTA ATCTAA               CCAGCCTGTTTTTCC  55 22
           B 3195839 .. 3195852 -  -9.5  -5.64274   GCAGCCATAAAAAAA               CCCGC TTTC GCGGG                TTGGGCTTACAGCAG 100 32
         mug 3191040 .. 3191055 - -11.8  -4.21275   CTAAGTCAGTTAAAA              CCCCGG TTCG CCGGGG               TTTTTTATATCTGCC  91 69
         gcp 3184977 .. 3184990 -  -9.5  -5.47399   GTAAGCGTAAAAAAA               GCCGG TTAA CCGGC                TTTTTTGATCTCAGA 100 36
        folB 3183742 .. 3183765 -  -8.1  -4.86773   TAAAACTATGAAAAA          GGCGCTAGC TGTTGC GCTATCGCC           TTAAATCTTATCTGC  86 158
        uppP 3182431 .. 3182441 -  -6.8  -4.56775   ACGCCGGTGGAAAAA                 TGGC CCA GCCA                 TCACGGACATGGCCC  76 469
        ygiF NONE
        glnE 3176375 .. 3176398 -  -2.4  -3.20322   GCGGATGATAACACA          GTTGC-GACAG GTG CTATCAGCATC          ACGCCGTGAGAGAGT  43 24
        hldE 3174867 .. 3174897 - -14.7  -4.42464   AACCGGCTAAATAAA      GGGCGGGCGGGAGC CCGG GCTCCCGCC-GCCA       TGACTCAGTCGCCGC 100 30
        ribB 3173412 .. 3173434 - -13.5  -3.56937   GAAGAGGTAAAGCAA           TCAGGCCAG TATTT CTGGCCTGA           CAGTAAGCCGTTTAG  91 37
        ygiD 3172240 .. 3172259 -  -5.6  -3.46106   GGAAAACGGCAAAGA            GATCGCCC GTGT GGACGGTC             CTTACGGCGAAGAAG  54 246
        nudF NONE
        yqiB 3167513 .. 3167548 -  -4.6  -2.89981   CACAATGAGATCATA    GTCGCGCTGTTGTGCGA TGA TCGCATC-CAGCACGGC    GTCATAACTCGACCA  47 197
         icc NONE
        yqiA 3166239 .. 3166257 -  -2.4  -3.84406   GTCTGATTAGAAGAA             GAAAATGG TTG CGATTTCC             GCGTTACTCAAGCGT  52 33
        parE 3164286 .. 3164300 -  -8.5  -5.65177   ACACGCACAAAAAAA               GCCCC ATTCA GGGGC               TTTTTCCATCAGGCT 100 46
        pheC 3162208 .. 3162238 - -16.9  -2.78216   CAGCCTGACGAACCA       GCGGAGACGGTAC TTCCT GTACCGGCTCCGC       TTTTTGCCCGCGTCC 100 200
        parC 3154122 .. 3154137 -  -3.2  -2.78216   CAGCCGGATGAATTA              CGCG TCGCTGTC CGCG               CTGCCGGGACGTGCC  43 7
        plsC 3153317 .. 3153337 -  -4.7  -2.54919   ATCCATGCAGAATAG            TCCGATAAA GGG CTTATCGGT            TAGATTTTACCGTTT  46 25
        sufI 3151285 .. 3151299 -  -2.7  -4.12198   TACAACCTGCTAAAA               GCGGG AACAA CCGGC               ACCACGCTCAACGTC  58 487
        yqhC 3148316 .. 3148345 -   -10   -3.8709   AAACGTCGCCAGAAA       CACGCCTGACAGC GGGTT GC-GTCAGGCGGG       CGGTTCGGCCACCGT  79 17
        pcaI NONE
        pcaJ NONE
        catF NONE
        pcaB NONE
        catD 3139634 .. 3139650 -  -3.6  -3.22906   TGATGGGGATAAAAT              CAGGGC AGATG GCGCTG              GGGATTGGGCGCATG  48 509
        vllY 3135649 .. 3135673 -  -9.9   -3.1506   AAACTGGCCCATCAA          CGTCTTACCGC ATG GCGGTCAGCCG          CACGGGAGCATTGGC  70 5
        pcaK 3133733 .. 3133747 - -11.4  -3.72405   CGGATAAAACGAGAA               GGCGCA ACG TGCGCC               CGCCGTTCCGTGCGG  80 270
        exbB NONE
        exbD 3128806 .. 3128823 -  -5.5  -5.77988   ACAGACATAAAAAAA             GCGCG GCGGAATG CGCGC              TTTTTAGCCGTGATA 100 136
        citH 3127241 .. 3127274 -  -5.9  -4.21194   CCTCACCACGCAAAA     CACGCCGCCTGCGGGA AAC TACAGC-GACAGCGTG     GTGGTGGATATTGCG  69 43
        ydcR 3118842 .. 3118852 -  -2.4  -4.41348   CGCTGGGGAAACAAA                 GCCG GAT CGGG                 AAACGCTGAACCAAA  61 423
        ytmO 3114363 .. 3114390 -  -7.6  -3.53012   CGCGGTCGTCGCAAA        CTCCTGGCCGGA GAGT TCAGGCCAGGTA         TGTAATTCACGTCGC  66 99
        yxeP NONE
        yxeK NONE
        fliY NONE
    PAJ_2567 NONE
        yecS NONE
        gluA NONE
        fliY 3107729 .. 3107746 -  -9.1  -6.01187   AAGGAAATAAAAAAA             CCCGCCA GAGC TGACGGG              TCGGTGCACATTCAT 100 77
    PAJ_2563 3106639 .. 3106669 -  -3.8  -2.81055   CAAGATAAGACAGGA       TATTTCGCCGGCTC GGC GCGGCGGCGGGATA       TGAAAAATCTTAATA  45 167
    PAJ_2562 NONE
        fbpC NONE
        potD NONE
        modB NONE
    PAJ_2558 3099669 .. 3099702 -  -3.7  -3.70902   GCGTTTAGATCCAAA     CCTGCCGCCCGGTAA TCTG CTGCTGAACGGCAAG      CTGGTGGTACGCGAC  55 112
        exuT NONE
        yicI 3094771 .. 3094792 - -17.3  -4.64861   TCCGCCTAAAATAAA           CCGGCCCAC GCAG GTGGGCCGG            TAGTGTGATTTGCGC 100 47
    PAJ_2553 3093138 .. 3093150 -  -6.9  -3.91897   GGCGTCAGTCAGAAA                CGGCA GGC CGCCG                CGCCGGTAGCGCGTC  66 119
        prfC 3091305 .. 3091318 -  -3.8  -3.54459   GGAATGGCCCTGAAA               GCAC GAATTA GTGC                TCGCGGGTTTTACGG  52 19
        osmY 3090089 .. 3090107 -  -5.3  -3.02263   ACATCGTTGCGAATA             TGAAGCA TCCTT TGCCTCA             CAATAACATTCGCAC  51 360
        yjjU NONE
        yjjV 3088063 .. 3088073 -  -8.2  -2.57931   TGGAGCCCGTATAAG                 CCCG CGA CGGG                 AATGTTATTATTATA  61 74
        deoC 3087088 .. 3087104 - -13.7  -4.58303   GGAAAGAGGAGAAAA              GGCGGCA AGA TGCCGCC              CGGGGATATCAGTAG 100 34
        deoA 3085620 .. 3085632 -  -5.5  -4.81814   AGCACCATAATAAAA                GCACG TTT CATGC                CAGTCTCCTGCGCCA  75 118
        deoB NONE
        deoD 3083594 .. 3083647 -  -5.9  -2.79492   GCGGGAAGCGTAAAT CTTCTG-ACGCGCTCACCCGGCAACG TCG CGCTGCCGGATGAGCAAGAGCATCAA TGAGCGTGGAGATTA  52 38
        mrdA 3081146 .. 3081160 -  -6.4  -3.09635   AGCGCCATTATTCAA               CGCATC AGC GATACG               CTGGACCAGGCGCCG  52 424
    PAJ_2537 3074652 .. 3074663 -    -3   -3.1247   ATCGTTCAGATCGAA                TACA TGTG TGTA                 ATCAGTGTGAACATT  45 65
    PAJ_2536 3073476 .. 3073486 -  -2.4  -3.85698   CTTGTTTTTGACAAA                 GGGG TTT CCCT                 GGTGCTGAAGCACCA  52 80
    PAJ_2535 3072205 .. 3072229 -    -7  -3.01791   ATTCTCCGGTTAACA          GGCGGGCTGC ACCCG GCAGCGCGCG          TTGTTCATAATCAGA  59 36
    PAJ_2534 3071423 .. 3071438 - -10.4  -2.62184   TGGTGCCTGAGACGA              CAGCCG GCTG CGGCTG               CACGTCAGATTTCTT  69 222
    PAJ_2532 NONE
    PAJ_2531 3068764 .. 3068794 -  -7.6  -3.41051   GGATCTCTACCAGAA       TGCGCAGCCC TGACAGCTATG AGGCTGCGCA       CGTCCGGTGCGTGGC  64 120
    PAJ_2529 3065120 .. 3065142 -  -7.6  -2.71364   CCACTCCGGGAAGGA           CCGTCACACC GCC GGAGTGAGGG           AAGGACTGAATCAGG  58 36
    PAJ_2528 3063592 .. 3063615 -  -9.5  -3.85698   GGCTTCCGCCAGAAA          CCGCCCCAG GTTCTG CTGGGCCGG           CCCCGGGTTATCCCG  79 251
    PAJ_2527 3061812 .. 3061861 -  -5.5  -3.88291   CAGCATTCCCATAAA GCGATTGCGGTGCCCGGCAAGCAC GAG GTCCACGCCCAGCTCCGCGAT-GC ACTTCTCCACGTCCT  61 314
    PAJ_2526 NONE
    PAJ_2525 3059588 .. 3059603 -  -7.5  -4.57569   GCAGGTCCGGAAAAA              GCGCG TTCAGG CGCGC               GCCCAGCTGCCAGCG  80 94
    PAJ_2522 3053175 .. 3053194 -  -4.2  -3.16039   AATCATCCTGATTAA            GCCGAATA CTTT TTCTCGGC             AGCGTCGATTTCATC  48 2
    PAJ_2521 NONE
    PAJ_2520 3050834 .. 3050844 -    -4  -2.80443   CGATAGTTCATCAGA                 TCAT CAA ATGA                 CAGATGAACGCCGTA  45 186
        oxyD 3048891 .. 3048918 - -13.6  -4.15106   CATCAAGGTTGAAAA        TAAACAAGGGGA CTCC CCCCCTTGTTTA         TATTGCAATACTTAC 100 23
    PAJ_2517 3046038 .. 3046053 - -11.8  -3.84451   TTGCGCAAAGTTAAA              GGCCGG GCAA CCGGCC               TTTTTTATTTTTTTG  88 294
    PAJ_2505 3025209 .. 3025257 - -14.5  -2.66517   AGTCATTAATAAGAC CCTTCGTTATCGCCCGGCACC GGGGTTT GGTGTCGGGCGGGAACGGAGG CTGCGGGTGCGGGCG  90 128
    PAJ_2500 3014922 .. 3014950 -   -11  -2.57132   TTCGCTTTGCACAAG       CCCGGCGG-TGCC GCAA AACATCCGCCGGG        TACTCTGCGAGGCAC  72 524
    PAJ_2496 3010172 .. 3010189 -  -5.5  -2.71731   GGCATCGTTGAAGGA             CTGGTCA GGCA TGACCTG              CGTCGCTACGGGGCA  46 477
        yybE 3005717 .. 3005739 -  -5.5  -2.82516   GGTTCCATGATGATA           TTCGGCGAG CATCT CTCACCGCA           AAAAATGCTTGCTCT  49 60
        ytfH 3002847 .. 3002862 -  -2.6  -4.49556   TCCTCAGGAAAGAAA              GAATCCA TGG TGG-TTC              TCCTTTGCAGATGAA  65 308
    PAJ_2487 3000187 .. 3000214 - -18.6  -2.81256   ACAGATGATGAATCA        CACTTACGGGCA TAAT TGCCCGTAAGTG         CATCAACGAAGCCTG 100 156
        ydaM 2988579 .. 2988589 -  -5.4  -3.29263   ACAGCGCTGGCAGAA                 TGGT GAT ACCA                 CATAAGCCTGGCAGA  54 74
        mhpC 2987646 .. 2987659 -  -9.5  -6.38492   AGGAATAAAAAAAAA               CGCCC TGAC GGGCG                TTGCTTTCAGATTAT 100 50
        ymdF 2986754 .. 2986781 -  -7.8  -3.90762   GAGCGCTGAAAAAGA        CACCGGAAAG GGGGCGTT CTTTCCGGTA         AGATTCGTGCGACCT  70 152
        yciF NONE
        yciE 2985345 .. 2985381 - -16.7  -2.82742   ACCGCCGCAGAAGCA    CGTAAAAAAGCCGGGAA CAT TTCCCGGCTTTTTACCG    CCTGCGGCACCGCAA 100 46
    PAJ_2474 2982638 .. 2982656 -  -6.6  -3.41073   GACTGGAGTGAAAGA             CGCTTCCA TGC CGGAGGCG             AAGTGGGTGCCGCCT  58 218
        ytfH 2979326 .. 2979336 -  -2.4   -5.1861   CTTAGCACGAAAAAA                 CGCG CAA CCCG                 CTGTTTTTAGCTGTT  76 486
        cydA 2977497 .. 2977518 -  -2.1  -3.73775   GCCATCCTTATTAAA           GGGAAACAG CAGG CCGATGCCC            AGGTCGAAACCGTCC  50 107
        cydB 2976332 .. 2976349 - -12.7  -4.68593   GTTACTATTTAAAAA             GCCAGCC CGAA GGCTGGC              TGAGTAGACAGGCAG 100 269
         rob 2974921 .. 2974934 -  -9.5  -5.15526   ACAGAAAACGAAAAA               GGCGC TCAG GCGCC                TTTTAAGGGGATAGC 100 417
        yqjH 2973880 .. 2973904 - -11.5  -3.38522   GAGTCAGTGGAAAGA          GCCTGATGG TAGTGGG CCATCAGGC          GAAATTCAATCAACG  82 60
        yqjI 2973165 .. 2973177 -  -4.1  -3.59979   GCGGCGTATTTGAAA                TCACC CTG GATGA                ACATCTGCTGTGGGA  52 173
        speC 2968501 .. 2968511 -  -8.2   -2.5602   GAAGCAGCGAAGGGA                 CCGC GCA GCGG                 CGGGTGGGCAGGACG  60 207
        melR 2960891 .. 2960902 -  -4.4  -3.68761   AGTTCAAAAGCAGAA                GCAA GCCT TTGC                 CACGTTCTGCTTTAT  55 150
        trmB NONE
        yggL 2959746 .. 2959760 -  -2.7  -2.76361   TACGAATCATACAAT               CTCCC TGTCT GGGTG               TGAAAGCGACACTGC  42 48
        yggN 2958952 .. 2958969 -  -9.1  -5.04325   GCTAAAGCAGAAAAA             CGCCAGCC CGT GGC-GGCG             TGACGTTCAGGATGA 100 80
        farR 2955036 .. 2955057 -  -3.7  -3.95424   ATGAGCAATACGAAA           CCTCGGCCTA TGC TAAACCG-GG           CTACCGCTGTGAGCA  58 484
        yggR 2951061 .. 2951073 -  -3.3  -4.25283   ACTTCGGCACCAAAA                GCATC GGC GTTGC                GGTTGGTCAGCAGCT  61 383
        speA 2939066 .. 2939100 - -13.6  -6.02914   TTGAGATAAAAAAAA     TCCCCTCCGCGTCG TTAGGCC CGACGAGGAAGGGA     TGGGTTGCTGCCGAT 100 83
        speB 2938042 .. 2938073 -   -16  -3.45134   GCAAGTAAGTCAGAA      TCAGAGGGATAACC CTGA GGTTATCCCTCTGT       CGCATCAGCCTTTAT 100 30
        tktA 2934950 .. 2934966 -  -7.9  -3.29461   TAATTTTGTCGATAA              GGGGGCA AAC TGCACCC              CCTTTCATCTGGGCG  64 73
         epd 2933663 .. 2933681 -  -3.1  -3.31144   CGTTGATTCTCATAA             GTTTTGC CAGAC GCAAACC             GCGTCTTACCTGAAA  47 31
         pgk 2932417 .. 2932432 - -11.8  -3.67792   GGACAGCGATTTAAA              CGCCCG GTTT CGGGCG               AGTTTTCAGGCGATG  85 65
        fbaA 2931210 .. 2931231 - -14.5   -6.2845   AAGGATAAAAAAAAA           GTCCCGATC GGAC GATCGGGAC            TGAGTCGTTCGTCTG 100 77
        mscS 2929655 .. 2929682 -   -15  -4.71426   CTGCTATTAACAAAA        TTAATGGGCGAC CGCT GCCGCCCATTAA         CGTTACTGCGTTGCG 100 28
        argO 2928849 .. 2928864 -  -2.5  -3.37732   ACATGAAGCCCACAA              GCGCA TCATAT TACGC               GTTGTTTGGAGTGAA  45 99
        yggE 2927928 .. 2927961 - -22.5  -4.08945   AGGATGCGGGTAAAA     GGCGCAGCCGGCACA GGGA TGTGCCGTCTGCGCC      GGTCCGTCAGGTTGA 100 129
        rpiA 2925997 .. 2926020 -  -9.4  -5.72207   TTTAAATCAAAAAAA          GCGGGCGCCC TGTT GTGCGCCCGG           TGCTTTATTTTTTGA 100 30
        serA 2924466 .. 2924489 -   -11  -4.25056   TATGGGATGAATAAA          CCCGGGCA TGCTTGTG TGCCCGGG           TAGGTGACAGCGTGG  87 43
        ygfB NONE
        pepP 2921138 .. 2921151 -  -4.5  -3.34947   TAAGAATGGTCATAA               CGCGCG TGC CGC-CG               CCATCAGCGCTTCGA  52 6
        ubiH 2919961 .. 2919979 -    -3  -3.05384   GTGCCTCTCAGTTAA             CGCTTAAC CCA GCCGAGCG             TACGCTCGGCCAGAA  43 3
        visC 2918704 .. 2918721 - -11.3  -5.67063   GTGAGCATAAAAAAA             GCCAGCA ATTA TGCTGGC              TTTTTGCGGGTGAGC 100 45
        gcvT NONE
        gcvH 2916769 .. 2916796 -   -15  -2.95656   AATGCAAGTCAGATA        TC-TGCGGCCTCA GTT TGAGGCCGCACGA        CGATTACTCGTCAAT  91 29
        gcvP 2913803 .. 2913819 - -13.7  -5.61596   ACCTCCATAAAAAAA              GGGCCGA AAA TCGGCCC              TCATAATTAAACGCG 100 51
        ygfF 2912796 .. 2912813 -  -5.5  -5.27399   GAAGAGATGAAAAAA             GCCGTCA TTCA TGACGGG              GTGGATCTCATGGGG  86 252
        yqfA 2909550 .. 2909566 -  -2.9  -3.55444   TCCCCAGGCCGCAAA              CATGCAG GCG CTGGACG              CGATTAGCTTTAAAA  50 386
        ygfY NONE
        ygfX 2907872 .. 2907882 -  -8.2  -4.04474   AGATTCTGACAGAAA                 CCGC CGA GCGG                 CTTTAAGCCGCGCGC  76 170
        xerD NONE
        dsbC 2905567 .. 2905587 - -12.6   -3.5393   AGGAGCGGCGGTAAA            TCTGCCGG TAACC CCGGCAGA            TCGGCTACCGCTTCA  89 76
        recJ 2903854 .. 2903890 -    -8  -3.66178   CGTGGCAAGGTTAAA   CTGGCAACGGCGGGA ATGTGAGG CCCCGCCGTCACC-G    CTGGCTAACTGAGCG  68 30
        prfB NONE
        lysS 2901029 .. 2901046 - -10.5  -5.73978   AGCAGAAATAAAAAA             GGCCGGA ATCA CCCGGCC              TTTAACCAGCATCTG 100 45
    PAJ_2401 2900111 .. 2900121 -  -6.8  -3.01712   CGTCCTTCCGTAACA                 GCCA TAT TGGC                 GACAAAGTGAATCTT  53 343
        ydhP 2898038 .. 2898059 -  -2.9  -3.65351   GGATGGTGATGGAAA           CCCACAG-CG CGG CGTCCGTGTG           CGCGATGGTGCAGGC  50 251
        lysA 2895893 .. 2895907 -  -2.8  -2.78395   AACGCTCAGCAATGA               GGTTCT GGA AGAACT               CGAAGCGATCCATCG  41 135
        nudH 2891718 .. 2891728 -  -2.4  -3.97947   CTGAGTGAGCATAAA                 GGGC GTG GCCT                 ATCCTCTTTTACGTC  55 24
        ptsP 2889411 .. 2889434 -  -3.7  -3.07132   GATGCACATAAATTA          GGGCTGGGC ATCATA GCACAGCCA           GTTTTCTGAGTAGCC  45 59
         lgt NONE
        thyA 2887641 .. 2887668 - -17.1  -5.88197   GGAAAGATAAAAAAA        GCCCCGGTATG CAAAGT CATACCGGGGC         TTAGTATCAGGAAAC 100 43
        ppdA NONE
        ppdB NONE
        ygdB NONE
    PAJ_2385 2885705 .. 2885715 -  -3.2  -4.49756   CGTGAAACATGAAAA                 CTCC TGT GGAA                 AATCAAAACGGCATA  66 122
        recC 2882245 .. 2882269 -  -7.8   -4.1899   TTACGTTACCCAAAA         GCCGCC-TTGC CAGC GCATTGGCGGC          TGAAAATACAACAAA  75 78
        ptrA NONE
        recB NONE
        recD 2873872 .. 2873900 -  -4.5  -3.43654   GAAAGAGATGTACAA        CTATCAGCGCC GCTCAAA GGTGCTGATGG        CGGATTTAACCTGAC  52 74
        amiC 2870967 .. 2870981 -  -9.2  -2.73124   CGTTATCTGGCAAAG               GGGCGC TGA GCACCC               GGCGGCCTCTGAACA  63 437
        mltA 2867716 .. 2867738 -    -7  -2.89055   CAAACCTGTTACAGA          GT-GCGGGC CAGAAC GCCCGCCAC           ATCAAAAATTAGTTA  57 34
        ygdL 2866756 .. 2866779 - -13.9  -3.17075   CGCCGTTGAAGGCAA          GACGCCAGC TCAGTT GCTGGCGTC           CGATCCGCTCGATCT  78 143
        ygdI 2864534 .. 2864556 -  -2.2   -3.4252   CTTTACGTATTAGAA           TTTATAAT CCGAGAC ATTATAAA           TTGTCCGTTGATGAA  45 276
        gcvA NONE
        ygdD NONE
        mtfA 2861985 .. 2862004 -   -15  -2.53382   AGCATCGTCAACCGA            TCGGGCGC CATC GCGCCCGA             TCGGTTCGATTAGCG  89 35
         syd 2857669 .. 2857695 - -16.7  -5.64274   GCAGGCATAAAAAAA         GGGAGCACTGT ATTAA ACAGTGCTCCC         GGTTCGTTTGCAGCT 100 520
        yqcC NONE
        truC NONE
        yqcA 2855986 .. 2856018 - -18.5  -3.01712   CCTGTTGTCGCAACA     CCGCTGCCG-CCGG TGTAAT CCGGACGGCAGCGG      AACAGCGTAGCAGCC 100 50
        gudP NONE
        gudX 2851164 .. 2851183 - -11.4  -2.90392   TATCCCTTAAGCAGA            GGCCCGGCC AAA GGCCGG-CC            GTTTACGGTCAAATG  76 322
        gudD 2849817 .. 2849829 -  -3.3  -3.52177   GCCCAAAAAAGTTAA                CGCAC CAG GCACG                GACGCTTGTTATCAA  50 9
        garL 2849009 .. 2849019 -    -4  -2.73441   GATTACTTTTTAAAT                 TTGT CGC ACAA                 CGCCTGCGTGGCACT  44 2
        garR 2848061 .. 2848088 - -11.2  -2.75521   ATCAGAGCGTGAAAT        CGGCCCGGCCTC CACA GAAGCCGGGCAA         GGCATTAGCGAGAGA  74 30
        garK 2846847 .. 2846869 -  -9.9  -4.56978   CTGCGAAAGAACAAA          CGGCCCTGTC AGGT GA-AGGGCCG           TGAATACGCTTAGTG  91 35
        rumA NONE
        relA 2840381 .. 2840412 - -14.5  -2.50077   CGGTGATAAAAGCAG      CCAGGCGCACGTC GGTCAA GACATGCGCCTGA       TAACGGACGATTAGT  89 36
        mazG 2839462 .. 2839479 -  -2.7  -4.87803   TAGCGGTAAACAAAA             TTTTGAC CTGC GTCACAA              ATCTGACGTCAGGCT  71 88
        pyrG 2837636 .. 2837668 - -21.5  -3.09968   TAGTCAATCCTAAGA      CAAACAACGCGCGAA AAG TTCGCGCGTTGTTCG      TTAAACTTATTTCGC 100 32
         eno 2836257 .. 2836273 - -10.8  -5.60993   CCGGGCATAAAAAAA              CCCGCC ACGTG GGCGGG              TTATGATCAGAAGTC 100 55
    PAJ_2348 2834445 .. 2834456 -  -5.8  -3.34962   CCGCACAGGGCACAA                CGGT AAAC ACCG                 GCGTGATCTCAGGCG  57 517
        ygcF 2832659 .. 2832669 -  -6.8  -3.72576   GTTCCGGCCAGCAAA                 GTCG ATC CGAC                 CTATGATGCGATTCA  63 245
        cysJ NONE
        cysI NONE
        cysH 2826193 .. 2826216 -   -16  -4.35116   GAGGCCATAGCAAAA          CGGGCGACCC CAGA GGATCGCCCG           TTACCAGAACTAAGC 100 48
        kipR 2820238 .. 2820254 -  -6.6  -3.64703   GTCGGCTCAGGTAAA              GTCAGA CAGCT TCTGAC              CCGCGTTAATTAAGG  63 0
    PAJ_2330 2818717 .. 2818739 -  -4.8  -4.08692   TAACGCCCGGCAAAA           GCTCAGAACA AAA TGTGCTTAGC           GAATGATCTTATGAG  62 74
        cysG NONE
        cysD NONE
        cysN NONE
        cysC 2814171 .. 2814226 -    -2  -3.51934   TGTTCTGCATAAATA TCCTGTCAACGCGAAGGCGGCAAAACG AAAGG CGCTTTGCCGCTGTCT-GTT--CAGGA ACTGATAATATCGCG  47 20
        ygbE 2813744 .. 2813756 -  -3.3   -3.4331   ACTGGCAGTAAAAAT                GGCGT GCA ATGCC                GTTTATGCAGACAAA  48 114
        ftsB NONE
        ispD NONE
        ispF NONE
        truD 2811032 .. 2811086 -   -10   -3.4647   TGGAACAGTGAAATA CG-CACACTGCCATGCCAACGGGCCGC CTAC GCGGCTCGTTGGCA-GCCTG-GCGACG AGGCCGGTTCTGATA  74 59
        surE NONE
         pcm 2809411 .. 2809433 -  -3.4  -2.63616   AGTAGCAATATCAAC           TACCTGATTC CAT GAAACAGTTA           TGAAGAAATGCTAAC  42 48
        nlpD NONE
        rpoS 2807085 .. 2807104 -  -9.3  -6.02914   CGCAGATAAAAAAAA            GCGATGG GGTTAA CCATCGC             TTTCTGTTGATGTGC 100 52
        mltB 2801602 .. 2801615 -  -3.1  -3.65542   GGTAGTTTTAAAACA               GCGATC CCT GA-CGC               GCCTTGCTGACCGCC  51 4
        phnA 2801127 .. 2801138 -  -7.2   -4.3208   CTTTATAAGGGAAAA                GCCC GGTC GGGC                 TGACAGGAATAAGAT  76 70
         tam 2800204 .. 2800220 -  -2.1  -4.20516   CGCTTAGTCAACAAA              TTGCGCG TTA CGCTCCA              GTTTAGCCGTTGCGT  57 28
        ygaD 2799602 .. 2799621 -    -8  -2.70932   TGTTGCGGGTAATTA            TACTGTAT AGTC ATACAGTA             TCAAGTTTAATTTTG  58 32
        recA 2798430 .. 2798452 - -17.8  -4.27316   GGCGTTAATGTAAAA           CAGGAGCGGA AAA TCCGCTCCTG           CTTCAGGCTTTAATA 100 35
        recX NONE
        alaS 2795027 .. 2795050 - -12.4  -4.74132   ACATCGTATTAAAAA          GCGCCGGAAC ATCA GTTCTGGCGC           TTGCTACGATGAATT 100 52
        csrA 2794604 .. 2794638 -  -7.9   -4.1552   GACGGTGGGAACAAA    GGGT-AGCGTCTCGCA CAGG TGCGAGACGCTGAATC     TGTCAAACGTTGGTT  75 28
        yqaB NONE
        yqaA NONE
        gshA 2789960 .. 2789979 -  -2.2  -3.30903   AAAATTTTTTGAGAA            CGAT-GAAA CTT TTCCGATCG            CCCAGCGTCTGAATA  45 123
        luxS 2789365 .. 2789382 -  -9.8  -5.60993   GCTGTTATAAAAAAA             CGCCGC TCATGT GCGGCG              TTTTACTGTCCGGAC 100 53
         ffh 2785543 .. 2785556 -  -2.3  -3.85724   AAAAAGCAACCTAAA               CCGAG TAAT CCCAG                GCTTTTTTGTGGAAC  52 44
        rpsP NONE
        rimM NONE
        trmD 2783803 .. 2783813 -  -5.4  -3.53811   CTTATCCTGGGTAAA                 CTGA TAG TCAG                 GGAAGATCACTCTCC  56 32
        rplS 2783367 .. 2783389 - -15.6    -5.252   CACTGGCATAAAAAA           GGGGCTGGCA CAT TGCCAACCCC           TTGTTTGCTATTAAC 100 66
        aroF NONE
        tyrA 2779512 .. 2779529 - -11.3  -4.81685   AGTAATCAGTAAAAA             GGCATCC AACT GGATGCC              TTTTTAGCTTATGGC 100 34
        rluD 2775637 .. 2775647 -  -6.8  -2.93252   ATTGTGGAATAATCA                 GGCT CAT AGCC                 AGTCCAGCTGATCCT  55 18
        yfiH 2774831 .. 2774845 -  -5.7  -4.35116   TACTGGAGATTAAAA               TGAGG TCATT CCTCA               AATATTCAAGGTTAA  72 95
        clpB 2772183 .. 2772197 - -12.8  -5.24129   TCCGCGTACAAAAAA               CGGGCG TAA CGCCCG               TTTTTAATAAATATG 100 44
        yphC 2764067 .. 2764079 -  -3.4  -3.61894   AATTTTCTGTAACAA                CTGA AAGTG TCAG                ACCACCGCGCCAGCC  53 120
        kgtP 2762608 .. 2762628 - -12.6   -3.3506   TGTAAACCCTCAGAA            TGCCGCAG CCTGC CTGCGGCA            CTCCTTTCCTCTGCT  87 39
        yfiF 2755607 .. 2755617 -  -6.8  -2.72991   TCAGACGCTGAAGGA                 GCTG GAG CAGC                 GCGGATTGATCACCC  51 306
        yahK 2753808 .. 2753833 -  -5.4  -2.86747   CACTTACCACAATTA         CGCTGTCGGGT TTGAC ACCCGACCG-G         ATGGCGGCGGCGTCC  47 434
        ygaC NONE
        mmuP NONE
        mmuM 2738018 .. 2738051 -  -2.3  -4.41206   AAGGATCCGATAAAA     GTCAGGAAGCACAGT GTAA ACCGCCCTTCCCACC      TTTTCATCTGTCTCA  61 71
        mgtB 2728305 .. 2728318 -  -4.5  -3.23733   GGCATGGGACAAAAG               CGCAA TGGC TCGCG                AAGGCACACAAACGG  50 401
        yqeI NONE
    PAJ_2250 2726732 .. 2726745 -  -6.7  -4.06055   ATTTTCGAAATCAAA               CGCTT GTAT AAGCG                CGTATCGGCGACGGC  68 256
    PAJ_2246 2721304 .. 2721316 -  -3.3  -4.08216   CGACGTGCTGGAAAA                CGTTG GCG CATCG                TTTTGTCACCCGTTT  58 427
        acrB 2715389 .. 2715417 -  -6.7  -2.59683   ATCTGACCCGACAAG       CGGACGAATGGC TATGTT GCC-CTCGCCCG        GCCTGATTCAGAGGC  53 43
    PAJ_2239 NONE
    PAJ_2238 NONE
    PAJ_2237 NONE
    PAJ_2236 2708471 .. 2708496 -  -3.3  -5.52384   GCTTGAGTAAAAAAA         GCCTTGTTA TATTCAGG TCACAAGGC          TTGAGAGGCGAGGTA  81 49
    PAJ_2235 2706474 .. 2706490 -  -3.6   -3.8647   ATTGACCACATCAAA              GCCGCT TCGCC AGCCGC              GGTTAGCTGTTAAGA  55 28
        ycaK NONE
    PAJ_2232 2703483 .. 2703497 -  -2.7   -4.2536   TAGGCAAAAAAAAAC               CCGCC GTTGT GCCGG               AAACGTCCGAGGCTG  61 239
      tp53I3 2701919 .. 2701939 - -11.9  -4.07568   GGGTTTTGTTGAAAA            GGGCGCATA GCG TATGCACCC            TTTTTTGACCGACGA  91 95
        bglG 2699603 .. 2699643 -    -9  -6.20267   TTAAAAATAAAAAAA  CCTGAGAACGGCCC CCTTGTGTGTCAT GGGCCGCGCTCAGG  TTTTGCCTGCGCAAT 100 68
        ttuB 2697583 .. 2697596 -  -9.5  -5.93809   CGGCTACAAAAAAAA               GCGCC CGTA GGCGC                TTTACTGGTTTTTCA 100 52
        yagI 2692556 .. 2692578 - -10.5  -3.54424   GCGCACCGGGCGAAA           CGCCGGTGG TTATG CCATCGGCG           CTTTCAGTCAACCTG  77 104
    PAJ_2213 2678709 .. 2678721 -  -7.7  -3.35371   CACACTTTCAATCAA                CTGCT GAT AGCAG                GTTTCCTGTAACGCC  64 162
    PAJ_2212 2676104 .. 2676115 -  -2.2  -3.32844   TTGTCCATCTGATAA                CACC TTAA AGTG                 GGGAAAAAACAGGCA  45 18
    PAJ_2211 2675084 .. 2675109 - -11.9  -3.83568   GGATACTTACAATAA         TACCTCTGCCA TTAC CGGCAGAGGCA          TTTGCTTTCATGGAA  88 326
    PAJ_2209 2670378 .. 2670388 -  -6.8  -3.05715   AATGCGTTTATCGAA                 CGGT TCA ACCG                 GACGTACGGGACAGA  54 462
         cll 2666574 .. 2666586 -  -2.7  -3.31144   TTGTTACTCCCATAA                CAATG CCT CATTA                AGAGGAAGTTGCATA  47 1
    PAJ_2205 NONE
    PAJ_2204 2664465 .. 2664498 -  -6.7   -4.7078   CTAATTACGTAAAAA     TAATCGCGAAGGTCG GACT CGAACATCGCAACTA      TCCTTATGATCTTAA  80 123
        yfjG NONE
        yfjF 2661233 .. 2661272 - -15.2  -3.44792   CGAACGTAAAAGACA  GAACGTAAAAAAGGCGCT AATC AGCGCCTTTTTCATGCTC   GGAAATCGAACCGAG 100 44
        grpE 2657248 .. 2657277 - -19.4  -2.85508   TAAACGCCATAATCA       CAAACGGCCGCG TCAGAG CGCGGCCGTTTG        CAGGGTAAGACAGTA 100 42
        grcA 2655728 .. 2655745 - -11.3  -5.47821   ACGGACTTAAAAAAA             TCGCCTC CAGT GAGGCGA              TTTTTGTTTTTATAA 100 195
        yfiC 2653381 .. 2653414 -  -3.1  -4.60797   GCGCTACAGAGAAAA     GAGAGCCGCGG GCTGCATTTTAT CCGCGACTATC      CGGATTTGCTCCCTG  67 69
        rpoE NONE
        rseA NONE
        rseB NONE
        rseC 2648740 .. 2648756 -  -9.4  -3.62644   GCCATAATGACAGAA              GCCGCA GCAAG TGCGGC              TTGAGTGAGGATCAG  74 37
        lepA NONE
        lepB 2645679 .. 2645696 -  -3.3   -3.5032   TCTGCATACCAAACA             GGGCTGG AGAA CCAACTC              ATTCTGTTTGGTGTG  50 94
         rnc NONE
         era NONE
        recO NONE
        pdxJ NONE
        acpS 2641705 .. 2641729 -  -3.6  -4.63527   TCAGCAGGTGAAAAA         CAGCCAGA-GT AAGG ACGTCTCGCTG          CCCTGTTTGGGACCG  66 379
        yfhB NONE
        tadA 2639364 .. 2639385 -  -2.9  -4.59773   GCGCATGCGGAAAAA           GTCGCTCAGC ATT GCCGCGC-AC           TCCTCTTCCAGCACT  65 165
        purL 2633654 .. 2633673 - -10.7   -5.4505   GTGGGGAATAAAAAA            GGGAGGC ACTCAG GCCTCCC             GGTCTTTTTTCACCG 100 44
        yfhK NONE
        yfhG NONE
        yfhA 2629652 .. 2629668 -  -2.1  -4.15841   TTATTAAAGTATAAA              TGTCGCT GGC AGCGCCG              CAGACTATGGGGGCA  57 46
        glnB 2628859 .. 2628869 -  -4.6  -3.15544   CGCGAGCCGGACGAA                 CCCG ATG CAGG                 CCGCTACGATGCGCA  47 417
       glyA1 2626244 .. 2626261 - -11.3   -5.4833   GCAGGCAATAAAAAA             GGATGGC CATG GCCATCC              TCTTGTCAGACTGTG 100 57
        hcaT 2624652 .. 2624663 -  -2.2  -2.78384   CTGCTGCGCACCACA                CAGC AGGC ACTG                 GACGCTTTCGAGCAG  39 376
    PAJ_2163 NONE
        yohM 2622018 .. 2622031 -  -4.5  -3.36401   CGCAGAAATTAAAAG               GGTCGG ATA CCG-CC               GGTAAAACCAGGCTG  52 5
    PAJ_2161 2620762 .. 2620783 - -17.3  -5.08255   AGCGCTAAAAGAAAA           GGCGGCACG ATAA CGTGCCGCC            TTTCTTATTGCCTTG 100 44
        yfhQ 2619041 .. 2619074 -    -7   -3.3903   CAACTATTTAACCAA     GTAAATTACTCAAGT ATTTA ACCTG-GTAATTTAC     TCAACTATTATTCGC  62 33
        yfhP 2618403 .. 2618436 - -11.7   -2.8655   CGTATTTATAGCAGA     TTCAGCCCCTACCGC GTTA GCAGTAAGGGCCGGA      GAAGAGGAGGATTAC  76 37
        iscS 2617198 .. 2617211 -  -5.3  -2.64155   CGGCTGGCAAATGCA               TCATG ACTT CATGA                GTTCACGCAGGCGCG  48 12
        pepB 2615755 .. 2615773 - -14.6  -3.87815   TTCTACCTTGAGAAA             GCGGTGAC CAG GTCACCGC             TGGATTACGCTTATT 100 36
        sseB 2614938 .. 2614963 -   -14  -4.08958   ATTGCGAAATAAGAA         GACGCGCGGCC GGTGA GGCCGCGCG-C         GTTGTCAGATAATAC 100 30
        yfhM 2608989 .. 2609008 -  -9.2  -5.19328   AGGCCAGAATAAAAA            GCGGCAGG GCTA CCCACCGC             TTTTTGATGTGCCTG 100 64
        pbpC 2606561 .. 2606579 -  -8.1   -4.1552   GACGTTCTGAAGAAA            CCGAGGGC GCGC GCCC-CGG             CTAAGAAACGGCGCC  75 153
         ndk 2605971 .. 2606006 - -17.8  -6.09196   GGGAAAAGAAAAAAA    TTGCGCCTTCACTAAG CTGG CTCAATGAAGGCGCAA     TATTGTACAACATCT 100 118
        yfgB NONE
    PAJ_2147 NONE
        yfgA NONE
        ispG 2601701 .. 2601741 -  -9.8  -5.53288   CTTAATGCAAAAAAA CCTGTCCGGCATCATACCT CATG AGG-ATGAAACCGCACAGG  TTCAGCTAAAAAAGT 100 65
        hisS NONE
        yfgM NONE
        yfgL 2598477 .. 2598511 - -13.6   -4.7254   ATGCCTGACTAAAAA     CGAAACGGCCCCTGAT GAA ATCAGGAGCCGTTGTG     CCAGGGAACCACCCT 100 58
        engA 2596862 .. 2596879 - -12.7  -5.78622   TTAGGGCAAAAAAAA             GAGGGCC ACCT GGCCCTC              GATCAATTAACGCTT 100 32
        qumA 2593787 .. 2593802 - -11.8  -5.73339   ATAAGCACAAAAAAA              GGGCCG CGAG CGGCCC               TTTTATTTTACCCGT 100 49
        guaB 2589348 .. 2589369 - -12.9  -4.08485   GTGACTTAAAGTAAA           GCGCCCGGC TGTT GCCGGGCGG            GAAATCTTACGGGGT 100 40
        guaA 2587667 .. 2587684 - -10.5   -4.8143   CCAATAACGGAAAAA             GCCCGCA TTTA CGCGGGC              TTAGGGGTGTTTTAA 100 75
    PAJ_2134 2586165 .. 2586180 - -10.4  -5.93809   TCGGGACAAAAAAAA              GCCCAC CGGA GTGGGC               ATTTCGCGACAAAAA 100 62
    PAJ_2133 NONE
    PAJ_2132 2583814 .. 2583848 -  -6.9  -3.28637   GACCAAGACCAGCAA     GCGATGAGCTGCGCC AACAA GGCGCGGCGCTTAGC     GCGCATGCTGGAGAT  59 123
    PAJ_2129 NONE
    PAJ_2128 2574736 .. 2574752 - -11.5  -4.87318   GCTAAAATGCAAAAA              GCCCGCA TAA CGCGGGC              TTCGTTTTACACTGC 100 409
    PAJ_2125 2569691 .. 2569719 -  -9.4  -3.06762   AAGCAAGCAGAGATA        CTCGCCGCGCGC ATTCA GCGCGCGACCGG        TCTGGGCTGCCCTCT  66 197
    PAJ_2124 2568402 .. 2568413 -  -3.6   -4.3208   TGGTACAATCGAAAA                CGGG CGGC CCCA                 AAATGGTGGTGCTAC  63 277
        alpA 2567204 .. 2567225 -  -5.8   -3.4252   GCTCATGTACGATAA           CATGGCGC TGGGCG GCGTCATG            ATGCTGGCGATGGTG  56 209
        pstC NONE
       pstA1 NONE
       pstB1 2556647 .. 2556669 - -19.2  -3.17051   CGCCCACGAGTAACA           GGCAGGGAGC CAG GCTCCCTGCC           CTTTTCAGCCATAGC 100 30
         upp 2553998 .. 2554015 -  -8.4  -5.81412   TTCAGGCAAAAAAAA             GCCGAC TCTCTG GTCGGC              TGGTTCATTCCTTTA 100 123
        uraA 2552630 .. 2552647 - -11.3  -3.32022   TCGGCCAGAGATGAA             TCGGGCA TCCC TGCCCGA              CTTTTGACAGCTGAC  78 48
         hda 2551749 .. 2551766 -  -8.4  -3.56643   CTGACATCGGGGAAA             GCGCGT TGCTGG ACGCGC              TGCTGGAAAATCCCA  66 120
        ccpA NONE
    PAJ_2107 NONE
        cysT NONE
        cysW NONE
        fbpC 2544743 .. 2544772 -  -6.4  -4.21194   CGCCATCAGGTAAAA       CGGCA-ACGCCAG GGTGG CCAGCGCCTGCCG       CAGCGTCTGATACTC  71 241
         icc NONE
        ydaM 2542204 .. 2542226 -  -6.2  -4.43189   ATTAATGGCAGAAAA           GCTGCTGATC GGC GATAAGCTGC           CGTTAACCGAGGTAG  72 209
        yicJ NONE
    PAJ_2099 2537752 .. 2537771 -  -3.4  -4.21827   GGAAAGATGTGAAAA            GCAGTCTG TGGC CTGACAGC             TTTCGTTGACCGGGC  60 179
        perM 2536506 .. 2536537 -  -7.4   -4.4267   TGGCAAAATCGAAAA      GGT-GTTCGACGATT TCA AAACGTCAAACCACC      ACGACATCGTGATGG  77 98
        dapA NONE
        nlpB 2533282 .. 2533300 -   -16  -5.43974   AAAACGAAATAAAAA             GGCCGGAG AAT CTCCGGCC             TGGGGTAATTTTTTA 100 38
        purC 2532411 .. 2532428 - -11.3   -5.1166   CACCAAAATGAAAAA             GGAGAGC CTGC GCTCTCC              TTTTCGTGACTTGCT 100 50
        ypfJ NONE
        ypfI NONE
        ypfH 2528702 .. 2528742 -  -5.5   -5.4505   TGGCCGAAGAAAAAA TAACGGTCATGCGCCCCCGC CATC GCGAGGGCGC--G-CGGTTA CATCATCATAATGAC  87 23
        yhcN 2520052 .. 2520070 - -11.7  -5.69473   GAGATCACAAAAAAA             CCGGCCA TTGGC TGGCCGG             TAAACACTACAGGGA 100 56
        ansP 2518316 .. 2518335 -  -9.3  -5.83822   CACAGGCAAAAAAAA            TGCCAGC ACGCTG GCTGGCA             TTCTATGCGAAACGT 100 46
        yffH 2517580 .. 2517616 - -11.6  -3.01712   GGCCTGCGCGTAACA   TTCAG-GCAGAGGCGCC TGGT GGCGCGTCTGCTCTGTA    CTCCATCAGAGCGTG  78 31
        ypfG 2508038 .. 2508054 -  -7.9  -3.91716   TGACGGCGTAAACAA              CCTGCTC GCT GAGCTGG              TGGGCAATCAGAACG  69 335
        cimH 2502575 .. 2502603 - -20.4  -3.01712   GTCGCCTGGCCAACA        CGACGTGCCAGC CCTGC GCTGGCACGTCG        CTTTTCTGAACGCCT 100 167
        maeB 2496842 .. 2496863 -  -7.1  -4.19238   GCGCGAAGGTGAAAA           TCGGGGCTG CATG CGGCCCCGT            TGTGTTACAGCGGCT  73 30
    PAJ_2062 2495742 .. 2495764 -  -4.1  -5.00616   CGTTTCGTCAAAAAA          TCGCGTCGGC TATC GCC-ACGGGA           ATAATCAACTACTTT  76 95
        ypeA NONE
        yfeZ NONE
        yfeY 2493053 .. 2493063 -  -2.4  -3.62418   ATAACTCAGCGTAAA                 CCCG TAA CGGT                 TTTATATATCGTTTG  50 151
        cysP NONE
        cysU NONE
        cysW NONE
        cysA 2489140 .. 2489158 -   -16   -4.7373   TCAGGTCATTAAAAA             GGCGGGAC ACT GTCCCGCC             CTGCGTGAAAAAAGA 100 46
        cysM 2488111 .. 2488155 -    -8  -3.55622   GCCAACTCCGTTAAA TAAAAAAGGCTTATGC-GCCC CGGT GGGCAACACTCGCCTTTTTTA ACGCATCGGTATTGA  66 49
        cpxR NONE
        cpxA 2485929 .. 2485946 - -12.7  -5.04222   GAAGTAAACGAAAAA             CGGCACC TGAG GGTGCCG              TTTTTTTATGTTCGT 100 49
        zipA 2479705 .. 2479721 - -10.8  -5.39721   CCATCAGATAAAAAA              CCCCCG ACAGG CGGGGG              TTTATCATAACAAAT 100 55
        ligA NONE
        ypeB 2477408 .. 2477441 -   -14  -2.84795   AAACGCGTAGGAAAT     CGCTGCCTCGTT TGCTCAATAT AACGAGGCAGCG      TAATTACTCACCGCG  88 29
        yfeR 2475308 .. 2475319 -  -5.8  -3.25449   AAAAAGAAGGTAATA                CTGC ATCT GCAG                 ATGGCGTTAACCGCC  54 72
        gltX 2472536 .. 2472556 - -12.6  -5.95946   CGAACAATAAAAAAA            CCGGAAGC GCGAT GCTTCCGG            TTTTTTTTCGTCTCA 100 121
        mntH 2465536 .. 2465567 -  -7.3  -3.54879   TTTAAAAGCTAAAGA      TG-GGCTGCCTGAC GGGTT GCCAGGCAGCGGCA      TTACATTCCCATCAT  64 26
        mdmC 2464558 .. 2464576 -  -8.1  -3.52906   CTATGCTTATAAAGA             GCGTCGC TGGTG GCGACAC             GAAGCGTGGCGACGT  64 222
        ipdC 2461292 .. 2461312 - -14.1  -3.28924   GACTCGTGTGTACAA            CAGCCTAAC CGC GTTAGGCTG            GCCTGCACAGAGGCA  93 53
         glk 2460180 .. 2460200 - -16.9  -3.46068   GGCGGAATGGAAACA            GCCCTTCCC ACC GGGAAGGGC            AACGGCAGGCATTAG 100 37
        rimL 2456944 .. 2456954 -  -3.2  -3.63837   ATAACGTGCCAATAA                 CAAC TTT GTCG                 ATAGGAGCAGAAAAT  53 44
        yfdZ 2455127 .. 2455147 -  -8.9  -2.62983   GCCATGTTGACAGCA            TTGCACCCG CGA CGGGCGCGA            CATTCTCGGCGATTT  59 498
        ttgV 2451394 .. 2451406 -  -3.3  -4.11295   TTAAAGGGAGACAAA                TGGCG TCG CCCCA                TAATAATCATGCTGG  58 376
    PAJ_2020 2450452 .. 2450468 - -10.8  -2.52795   AAGCCTCTCAATTTA              GCCCGC GTTAA GCGGGC              TTTTTTTGCTTATCC  72 35
        yvrE 2448565 .. 2448594 -  -4.1  -2.50994   TGCAACGCCAGTAAT       TTCAGAGGCCAGG ACAG CCTGGCCTCCCTT        TTTAGCCGCGAAACA  44 27
    PAJ_2017 NONE
    PAJ_2016 2444753 .. 2444773 -  -5.5  -4.36411   TATGAATTATGAAAA            TAGAAAAGC ATT GCTTTTTTA            GTTGTTTGTAAGGCA  69 95
        smfA 2443192 .. 2443228 - -23.2  -3.48593   TATGCCTGTAGATAA    CTCCCCTACCCGGTCA TGAGC TGACCGGGTAGGGGAA    ACGTTTGTGATCAGC 100 43
        prsH NONE
        papC NONE
        papD NONE
    PAJ_2011 NONE
        smfA 2437743 .. 2437764 -  -9.3  -3.18264   TGTGCCAGTCATCAA           CGACCCGCC CAGC GCCGGGCCG            CCCCCCGCCAGGGCT  67 380
        yfcS NONE
        mrfE NONE
        mrfF NONE
        yfcQ 2434573 .. 2434585 -  -7.7  -3.09092   AATAAAAAAAACGCA                TGAGG TTT CCTCA                CAGACTATTCATTAC  60 150
    PAJ_2005 2433546 .. 2433563 - -12.7  -2.74784   AGTGGTTAAAATGCA             GCGCCCA TGAG TGGGCGC              ATTCAGCGTGAAAAC  81 178
        malE NONE
        ugpA NONE
        ycjP NONE
        lacK NONE
        glpQ 2426721 .. 2426733 -  -4.9  -5.47431   TTAACATATAAAAAA                GAAAA TAT TTTTC                GGCATGCATATATAA  85 312
        ccmA 2422903 .. 2422919 -  -2.9  -2.83964   GACGACACAACATTA              CTGCCAC TCC ATGGCAT              GCAGGCGAACGGTTT  42 6
        ccmB 2422221 .. 2422235 -  -5.6  -3.72593   AATAAACGCTAATAA               CACGTC TAA GGCGTG               CTGATTTAGTGCAGC  59 31
        ccmC NONE
        ccmD NONE
        ccmE NONE
        ccmF NONE
        dsbE NONE
        ccmH NONE
        ccmI NONE
        vacJ 2415513 .. 2415551 - -16.2  -2.73124   TCTGATGCGCGAAAC   GCATAAAAAAAGCGACAC TGA GTGTCGCTTTTTTATTGC   TAACGGGAACGTCAC 100 143
        yfcZ 2413543 .. 2413560 -  -9.8   -5.1166   CACGAAAATGAAAAA             CGCCGC GGAGCA GCGGCG              CCGAAATGTTTAACG 100 35
        fadI NONE
        fadJ NONE
        sixA 2408873 .. 2408902 -  -9.3   -3.9009   AAGTGAGGTGAGAAA       TCTGGCG-CAGCGC AGC GCGCTGGCGGCAAA       AGAAATCGAAGCGCT  73 416
        yfcB NONE
        aroC NONE
        mepA 2403507 .. 2403517 -  -5.4  -3.44146   CGGGCTGACAACGAA                 CCAT TCC ATGG                 GAACCCTTACAGTAA  54 32
        yfcA NONE
        yfcM NONE
        yfcL 2401805 .. 2401824 -   -15  -2.84504   AGCGGGGAAATAGCA            CAGGGCGG TCTG CCGCCCTG             ACTACTCAGGCCGTC  90 31
        fabB 2398342 .. 2398363 -  -6.5  -4.80487   GATAATCAAAACAAA           GAAGGCCGG CAAG CCGACCTTT            TCGCAGGGTTCACGT  80 79
        tctD NONE
        qseC 2389913 .. 2389927 -  -2.8  -3.23708   GGCGTGCAAAAATTA               GGTG CCAGCAT CACC               AGCATCTTTATGAAT  46 186
        pdxB 2387854 .. 2387871 - -12.7  -4.16226   GACATAAAAACAGAA             GGCGGTG ATGT CACCGCC              CGGGGATTCAGAATT 100 79
         usg NONE
        truA NONE
        dedA 2385224 .. 2385235 -  -3.6  -4.10657   TGATACTGCTGAAAA                CCGC TTCA GCAG                 ACGGTAAATGTCGCT  58 119
        accD 2384196 .. 2384210 -  -3.5  -2.85078   TATACCCGATGAAAG               CCGCA AGGTA TACGG               TGCATTGGTGGAAGG  43 68
        folC NONE
        dedD 2381958 .. 2381982 -  -2.8  -5.28176   TGCATCCATAAAAAA          GGCGATGA AAAAATCCG TCTTCGCC          TGTGTCATTTTCACC  77 155
        cvpA NONE
        purF 2379762 .. 2379785 - -18.2  -3.48115   CCGGCAGAAAACACA          GAGGGCGGGA TAAA TCCCGCCCTC           CTTTTTGCATTCAGG 100 46
        ubiX 2379078 .. 2379110 -    -2   -4.1822   TTTTAGTTCAAGAAA     TGCAGGAACA-GTGA TCGC TCCCGCGTTTCTGCA      CCAAAGAAGGGCGAA  57 50
        argT 2377946 .. 2377973 - -13.5  -2.90496   GTGGGGTGGAAACGA        CGCTGCGCCGTC GTGCA GACGG-GCAGCG        CAGCTTCTGTTCTCG  85 134
        hisQ NONE
        hisM NONE
        hisP 2375277 .. 2375310 -    -3  -5.00884   AGCTGTCTGAAAAAA     TGCAGGGCAAGTAT TTCTTC ATTCCCGCCCCGCT      GTTCGCCGACAGCCC  74 449
        dalD 2373199 .. 2373211 -  -2.6  -3.53224   TATTCGCCCCCTAAA                CCAC GGCCA GCGG                TTGTTCTGGCTGGAC  49 8
        xylB NONE
        rbtT 2370369 .. 2370379 -  -5.4  -3.05046   GGATGTGGTGAAAAG                 CTGA GGA TCAG                 GGGAGCAATTGCTCC  51 52
        yfcF NONE
        yfcD 2367618 .. 2367636 -  -7.4  -3.30159   CCAACTGCTGCAGAA             CAGCGATT TCA AAGCGCTG             TGGGACCAGTATCGG  59 403
    PAJ_1939 2365732 .. 2365758 - -10.9  -3.72576   GTTCCGGTTATTAAA         CCGCCCACA TTGTTAACG TGTGGGCGG         TTGTCTGATCTGGAT  81 81
        mocR 2359417 .. 2359443 -  -5.9  -4.91473   CAATCTAAAAAGAAA         TGGCTTACAAA TTTAC TTTGCAGGCCA         TTGTATTTTATTGTC  81 118
       fbpC1 2358153 .. 2358173 - -14.1  -3.61398   CTTCCCGTTGAACAA            GAGCATGCA GAC TGCATGCTC            TTTTTTTATGCCTAT  93 37
        yfbV 2353858 .. 2353881 - -10.3  -3.75193   AATTACACAGGGAAA          GCGATGCGG GCGTAG CCACATCGC           TTTTCATTGATTTAA  79 79
        yfbU NONE
        yfbT 2352492 .. 2352504 -  -3.3  -5.00616   CGCGGCTGGAAAAAA                CCCTG AAT CAGCG                TCGTTCGCCCGAAAT  74 145
        lrhA 2348736 .. 2348765 -  -9.4  -5.82388   AAAGGTCAAAAAAAA       GCCTCCTGTTCT TTTTAC AGAACAAGAGAC        CTGTTTACAGCCATT 100 85
        nuoA NONE
        nuoB 2346976 .. 2346992 -  -2.1  -3.51411   AGGCGCTCAAATGAA              GGCGTCA GGA TGGTGCC              ATGCATTAATTTGTG  47 83
        nuoC NONE
        nuoE NONE
        nuoF NONE
        nuoG 2340435 .. 2340445 -  -2.4  -2.75183   ACCTGGAGTTAACCA                 GCTC ATT GCGC                 CGCCTCCTGCAGAGA  40 17
        nuoH NONE
        nuoI NONE
        nuoJ NONE
        nuoK NONE
        nuoL 2336224 .. 2336234 -  -2.4  -2.92667   TCAATCTTTAAATTA                 CCAG CAA CAGG                 GCCAGAACCACGACG  42 7
        nuoM NONE
        nuoN 2332989 .. 2333006 - -11.3  -6.02914   TTCAGACAAAAAAAA             TCAGGCC CGAG GGCCTGA              TTCAGTATGACAATC 100 46
        xynB 2331881 .. 2331907 -  -2.8  -4.26076   TTATCCTTACTAAAA         TGGGCCGCCTGC CCG GGAGGCATCACA         TCACTTTACCGCGCC  59 21
        elaA 2331338 .. 2331365 -  -6.3  -3.59979   CCGCCTCACGTGAAA        TGCATCTCAGGC CAACC GCCGG-GATGCA        TTTTTTTTGCCCGAC  61 67
        elaB 2328955 .. 2328976 -  -9.4  -3.74347   TTGAGAAAGCGCAAA           CGGACAGG AGTGAG CCTGCCCG            TTGTACGTATTGCAC  74 53
        cinA 2327380 .. 2327402 -  -7.7  -5.09895   CAGGCAGTTAAAAAA           CCGTCATTC CAACC GAATGGCGG           TTTTTTTTTCTGGCG  90 215
        gyrA 2319536 .. 2319564 - -16.8  -5.75342   CTGCCGCAAAAAAAA       CGGCAGGTC-GGG TGAT CCCTGACCTGCCG        TTGCTATTAACGTAC 100 51
        rcsC 2316105 .. 2316119 -  -3.5  -4.05027   GACAATGAACAATAA               CCCAG CCATT CTGAG               CTCGGTGCTGGATCT  60 429
        yeeJ 2298093 .. 2298118 - -10.3  -5.60993   CGTTGCAGAAAAAAA         GCAGCGGAAGC TTGC GCAACCGCTGC          TGTGGGTAAGTGCTT 100 58
        cyaE NONE
        cyaB NONE
        lktD 2292593 .. 2292615 -  -6.1  -2.88544   TTTTACCCTTATATA           TCGCCGGGC TTATT GCCCGGCTT           TTTTTTGCCTGAACG  52 207
        ompC 2291052 .. 2291077 - -14.7  -4.29106   CGGCAGATTAATAAA         TCAGGGAGCGC ACGG GCGCTCCCTGT          GACATTTAGAACTGG 100 31
        apbE 2289432 .. 2289443 -  -2.2  -2.58215   CATCACTAAACAGAT                CCAGC ATA GC-GG                TTCTCTCAGTCAGTC  39 35
        alkB NONE
        yojI 2286701 .. 2286718 -  -4.1  -2.79809   TAAAAACCTGAAGGA             TGCAGAA AATT TACTGCA              CTCAGGTATCAATAA  45 367
        yicJ NONE
        abfA 2280964 .. 2280995 -  -2.2  -5.48787   ATAACAGATAAAAAA      CACAGGCTGTTC-GA TAG TCAGGAATGCCTGTG      CCGAGCGGGTTAATC  79 476
        pupA 2273935 .. 2273947 -  -6.3  -2.79823   CGTGGTAAAATTAAT                TGTCA GGA TGACA                GCCAGTAATAATATA  54 158
        yddA NONE
        trxA NONE
        pmbA NONE
        tldD 2268095 .. 2268124 -  -5.5  -2.85585   GCTTAAAACACATGA       TCGCTGCAGGCTC TGGC GCGTCCGCAGCGC        GCGCAAACGCTGGCA  49 124
    PAJ_1876 2266602 .. 2266618 -    -8  -5.02074   TTATCCCTTAAAAAA              CCAACC TTTAC GGTTGG              TTTTTTATTGCCTGC  90 379
        ndpA 2263197 .. 2263228 -   -16  -2.73159   CGAATGCGTTGAAAG      TAGAAGGGCCGGTT GCGA AACCGGCCCTTTTA       TTTTGCCTGTTATCC 100 67
        rsuA NONE
         bcr 2258907 .. 2258942 -  -7.4  -3.94933   CTAAGCGGAAAAAGA    GGATGCCCGACGCCCGC TTA GCGGGCGACG-GTACGC    GGACGTGAGGCGTAG  69 7
        yejG 2258138 .. 2258175 -  -7.6  -2.75877   CGTACAAAAACAGAT   TCTGACGCTGCTACGG GGATTA CAGCAGCGGCGTCAGC    TGAGTTATCTGTTTA  54 188
        yeiW 2246708 .. 2246725 -  -4.7  -3.90766   CACCTATAAACAGAA             CGCCGCG GCTT CAGGGCG              TTATAGAATCAAATC  59 245
    PAJ_1857 2245519 .. 2245564 -  -3.1  -2.79796   CTGTATCCGACCAGA CTTCGCGC-GACAGGTACTG CCTTTTC CAGCGCCTGGCTGCGCGCCG GGTCGTCTGTTGGGC  41 499
        rbsR 2242646 .. 2242675 -  -4.5  -3.73873   TCAAAGTGAACACAA       TATGAAAACG-TTA CTG CAATCGTTTTCACA       TAAGATAAATTGGCA  57 186
        dapA 2241567 .. 2241580 -  -5.9  -3.72576   CTGCCGGTCAGTAAA               CCGGG TTAT CCCAG                AGATACGTTGAATAG  61 104
        dcuA 2240063 .. 2240073 -  -3.2  -3.36492   TGCTTAAGGTTATAA                 CAGC CTT GCTA                 AACCTGCTGCAAAAA  48 9
        fruB NONE
        fruK NONE
        fruA 2235848 .. 2235875 - -18.6   -4.2204   AACGTTAAGAAATAA        GACAAAGGAGCC TTGC GGCTCCTTTGTC         GTCTTACCTGTCAGG 100 36
        yeiE NONE
        lysP 2229594 .. 2229613 - -12.8  -5.09426   CGTAAGCTTAAAAAA            CGCCCGGC GTTC ACCGGGCG             CTTTCAGGCATTGTT 100 39
        btuC NONE
        fepC 2227594 .. 2227615 - -14.5  -2.89564   GGGTGATCTCACACA           GGGGATTGC CAGT GCAATCCCC            TGATTTCAAGACAGT  90 31
        yjiJ 2223350 .. 2223360 -    -4  -2.53112   AGGGAATCCAGCAAT                 CAAT CCG ATTG                 GAGATGAAAGCTTTT  44 40
        folE NONE
        yeiB 2221334 .. 2221357 -  -2.4   -4.4773   TCACATCAATGAAAA          CGGTTACATA CAAT TCTGTAACCT           TTGTGATGGCGGTCA  61 41
        galS 2220064 .. 2220079 -  -7.5  -3.72241   CATGAACCATGTAAA              CCGGC GACCAG GCCGG               TGCCCTCAACAGGAG  67 136
        mglB 2218839 .. 2218858 - -12.8  -5.39721   TGATGACATAAAAAA            GGCGCAGC AGCT GCCGCGCC             CGTCTGCAAAGAGTT 100 39
        mglA NONE
        mglC 2216215 .. 2216230 - -11.8  -5.41746   AAGGGCGCAAAAAAA              GCGGCC CTGA GGCCGC               TTACATCATTGCCAC 100 46
         mrp 2207747 .. 2207759 -  -6.9  -2.71924   CAGCGGGCGTTAAAG                CGCGC GAA ACGCG                ATATCGCCCGGAATC  53 7
        ahpC 2206340 .. 2206359 - -13.6  -5.00616   TTCCTGGTCAAAAAA            TCGGGTGC CGCA GCACCCGA             TGAGAAAATGATCGA 100 56
        ahpF 2204706 .. 2204729 -   -11   -4.8048   GCCGGATATTAAAAA          GCCCCGCAAC ATAG GTTACAGGGC           TTTCGTCTTACGCGT 100 46
        thiM NONE
        thiD 2199623 .. 2199644 - -11.6  -3.27923   TTTGAAGAGGATTAA           CGCCTTGC CAGTCT GCAAGGCG            AAACACGATGGGCTA  82 38
         udk NONE
         dcd NONE
        asmA 2174206 .. 2174244 -  -5.3  -3.29144   GGATCGCCTGCAGAA   TATTCCCCAGGAAGG TGAAGAGAT CCTCCTTGGGGATTA   CCGCTTACGTACTCT  52 113
        amsG 2170487 .. 2170533 -  -9.5  -4.03234   TTTTTTTTAGAGAAA TCTGCCCGCCG-GAACCTGAAGT GGC ACTTC-GGCGCGCGGCTGACAGA GGCTCTTTTGCGGCT  81 39
        amsH NONE
        amsI NONE
        amsA 2166466 .. 2166485 - -12.1  -4.28548   AGCCAGGGATCAAAA            GGGGCGG TCAAAC CCGCCCC             TTTTCTTTCAGCTCT  95 40
        amsC 2165041 .. 2165056 -  -4.7  -5.08088   AACGCCGAAGAAAAA              CCTGT GTTGTT ACAGG               CGACCGCCCCGCGAA  80 77
        amsB NONE
        wcaA 2163210 .. 2163224 -  -2.1  -2.98088   CCTCAAATTTATACA               CAATC CTGCC GATCG               GCTTAACGGTGTTTC  42 28
        amsD 2162084 .. 2162099 -  -3.9  -3.14132   TCCCGTCGTCATGAA              GGCCG TAAACT CAGCC               ATAAAAGGTGTCCCA  48 73
        amsF 2159789 .. 2159822 -  -5.2  -3.79862   ACAGCAAATAAAAAT     CCTGCACCAACATC CCAGAT GCTGTTGGTGTTGG      CTGCCGTATCAGGGC  61 53
        amsJ NONE
        amsK 2157076 .. 2157089 -  -2.3  -3.65542   GCCACCGCTAAAATA               GCGTT GATG ATCGC                CAACAGCCCCAGCTC  50 145
        amsL 2155840 .. 2155859 -   -15  -4.97405   AGCCATAAAAAGAAA            CGGGCGAC CTAA GTCGCCCG             TTGTTATTGGCATCA 100 38
        galF NONE
        galE 2153621 .. 2153636 - -10.4  -5.91981   AAAACCTAAAAAAAA              CCCGCA AGTA TGCGGG               TTTTTTGGGTATTTA 100 38
    PAJ_1785 2150968 .. 2151012 -  -8.8  -4.23999   GCACAGCCAAAATAA CTTATTGCGAAATGTCACATA TAGT TTTGCG-CATTTCGCAATCAG GATAATGCCAATCGC  79 71
         gnd 2143126 .. 2143143 - -11.3  -5.40072   GGTGGGGTAAAAAAA             GGCTTCC CGAG GGAAGCC              TTATAGCGCTTTGAT 100 50
        yeeZ 2129955 .. 2129975 -  -6.1  -3.50393   CCTGACCGCAGATAA           CCGCCTGC TATACG GC-GGCGG            CGTCGTTTACGGCGC  56 438
        puuA 2125997 .. 2126021 - -14.4  -5.52909   TAACATGCAAAAAAA          TAACCGACGC GGTGA GCGTCGGTTA          TGTTCTGAATTTGCA 100 109
        yeeF 2124327 .. 2124367 - -12.7  -4.02005   AAAAGCGAATAAGAA CAGCCCTGCTCTGT-CCC GTTATT GGGCACAGAGCAGGACCA  GGGGGATTACACTTC 100 32
        ygbJ NONE
        ygbK NONE
        ygbL NONE
        ygbM 2119674 .. 2119690 -  -4.3  -3.48378   TAAAGACGACCAGAA              CTGCACC GCT GCCGCAG              CACCGGTGTGATTTT  52 52
        ygbN 2118027 .. 2118046 -  -7.8  -3.63991   GATGATGCTGAACAA            CAGCGCTG GCTG CAGCACCG             TCGCGAAGTACTGAA  63 212
        dacD 2115109 .. 2115127 -  -2.2  -3.53257   AAGGCAAAAAGAAAC             GCCACCGC GAT GCGCAAGC             CGTGCACGCTACGGT  47 306
        yeeA NONE
        yeeX 2113587 .. 2113614 -   -17  -5.96219   CAGCCATAAAAAAAA        GCCCGCCCAACC TGAA GGTTGCGCGGGC         CGGTTATCAGCAGCG 100 63
        yhbW 2110143 .. 2110168 - -11.1   -4.7373   TTATTTTAGTAAAAA         CCCCACGCAGC GAGG ACTGTGTGGGG          TTATTAATCTGGCAA 100 53
    PAJ_1744 NONE
    PAJ_1743 2108690 .. 2108704 -  -2.8  -3.83262   GAAATGCCATAATAA               CCTCTT TTT AAGATG               TAACAGTTCCTTTGA  54 41
    PAJ_1742 2107730 .. 2107755 -    -9  -3.50929   TAAAGTAGATGATAA         CAAGCCAGGT GCTGGA ACCCGGCTCG          CACAATTTGACTTAT  71 124
        yjiW 2107187 .. 2107199 -  -6.3  -3.17723   TTATTGGCAACTGAA                TTCAC GCG GTGAA                GGAAACCGCGTTATC  57 156
        rhaT 2103770 .. 2103795 - -11.9  -4.32482   ACTGATAACGCAAAA         GCCTGATACGC GTTA ACGCATCAGGC          TTTTATCTCTGCGGA  93 42
        rhaB NONE
        rhaA NONE
        rhaD NONE
        yiiL 2097790 .. 2097813 -   -16  -3.92075   ATCTGTATCTATAAA          CCCGCTCAGG GAAA CCCGAGCGGG           CTTTATGTTTTTTGC 100 118
        yjhC 2094854 .. 2094879 - -11.1  -2.53715   CTGATCAGCATCAAC         CGGCCCCGGCAC TAA GC-CCGGGGCCA         CATCCGGATCATGGA  72 68
         lrp 2090285 .. 2090295 -  -3.2  -4.47707   CCGGATGAAAAAGAA                 CGTC AAC GACA                 CGACCATCGTGACCC  63 77
    PAJ_1726 2087157 .. 2087179 -    -4  -3.02461   CAAGCCTTGGGAATA           TGCAGCCCCA GCT TGAGGCGTCA           GCCAGTGACGTTTTC  47 48
        paaE 2086953 .. 2086965 -  -5.5  -5.03145   CAACGTCGGAAAAAA                GAGGA TGC TCCCC                GCAAGCCTTCGTCTG  82 48
        mocB NONE
        mglA NONE
        rbsC 2080072 .. 2080082 -  -4.6  -4.57353   TGGCACCAGAGAAAA                 CCCC CAC GGGA                 TTCCGTTTAAACGCT  71 213
         nac 2078254 .. 2078285 -  -8.1  -3.04263   AGCTCATCTTCAAGA      TCGCGAATATGGCG ACTGA CGCCAGATT-GCGA      AGTAAATAGCGTGCT  60 320
         cbl NONE
        gabD 2075749 .. 2075775 - -19.6  -5.96219   GACGCACAAAAAAAA         GCGCCAGCATAA CGA TTATGCTGGCGC         CTGAATTCAGTTATT 100 51
        betB NONE
    PAJ_1716 NONE
        puuB NONE
        yliB NONE
        yliC NONE
        dppC NONE
        yliA 2066734 .. 2066744 -  -2.4  -4.07568   TTTTGCTTGCCAAAA                 TGGC GGT GCCG                 GTTATTCGGCTTTCA  55 27
       sardH NONE
    PAJ_1709 NONE
        ycdW NONE
        hipO NONE
        gabT 2060905 .. 2060944 -  -4.9  -5.00884   ACGCTTTGCAAAAAA  TG-CGCCAGCGTTGACCC CGGCT GCGCGCACGCTGGCGGCA  CTGCCGGGATGATGC  80 62
         lrp 2059888 .. 2059909 -  -2.9  -4.16943   CGGTACAGGTGAAAA           GCTACACGGC GCT GCC-CGAAGC           CAGTCTTGAACTGGA  58 333
        codB NONE
        ycdL 2055695 .. 2055735 - -14.7  -2.89102   GACGTAAAAATGAAT  TTGCGCCAGCCTGTCCCGC TCA GGGCGACAGGCTGGCAGAA  CAGCCCGTTAAGGCT  90 33
        phnF NONE
        phnG NONE
        phnH NONE
        phnI 2052870 .. 2052897 -  -2.6  -4.43877   TAAGTGGGAAACAAA        GCCTGCGGCT TCAACGTT ATCCGCATGC         GACAGAACAAATTCC  62 246
        phnJ NONE
        phnK NONE
        phnL NONE
        phnM NONE
        phnN NONE
        phnP NONE
        phnC NONE
        phnD 2046051 .. 2046061 -  -2.4  -3.90291   ATGGCTGCAAGCAAA                 CTGC CCT GCCG                 TTAGCCGCGCGCGCC  52 26
        ptxC NONE
        phnE 2044042 .. 2044059 -  -5.5  -4.26076   TCAGGCGCAGCAAAA             GTGGCCA CAGC TGGCAAC              CTTGCTGATCAGCGG  67 157
        rbsA NONE
        rbsC NONE
        rbsB 2037948 .. 2037967 - -11.4  -3.53091   AGCTCTCCCGTTAAA            GCGGCACC CGAC GATGCCGC             GCGCCGGTTTTATTT  83 35
    PAJ_1682 NONE
        fbaA NONE
        rbsK 2035214 .. 2035240 -  -4.5  -3.71873   TCACCCACAGCGAAA        CGATGG-ACGTGT TTG AC-CGCACCATCG        ATGTGCTGATTATGC  57 108
        yieG 2032857 .. 2032887 -   -20  -4.19238   GTTCTAATGTTAAAA       CCGTTACAGCATAT TCA ATATGCTGTAACGG       TTGGATTAATCAGGC 100 35
    PAJ_1677 2031702 .. 2031740 - -12.6   -4.9445   ATAATGAATGAAAAA   GACGGTATTAATGCGAAA ACC CTTCCCGTTAATACCGTC   TCGTTAATTAAGACG 100 51
        yeeO 2028100 .. 2028110 -  -6.8  -4.41241   CAAATTTTTAGAAAA                 CACG AAG CGTG                 TCATTTATTAAAAAA  74 334
    PAJ_1674 NONE
    PAJ_1673 2026165 .. 2026179 -  -2.8  -2.57132   GGCTCTGTTCATAAT               CATCCT TTG AAGACG               GTTTTATTGCTTAAC  40 29
    PAJ_1672 NONE
        ytxE 2023463 .. 2023479 -  -7.9  -3.29558   CCACAATCGAGAACA              CCGGGCC AAT GACCCAG              ATAATAAACGAAAGT  64 109
    PAJ_1670 NONE
    PAJ_1669 NONE
    PAJ_1668 NONE
    PAJ_1667 NONE
    PAJ_1666 2016026 .. 2016045 - -13.6  -3.61517   ATTTGCTCGCAAGAA            GCACGCTC CGAA GAGCGTGC             TTAGCGTTTCAACGA  91 41
    PAJ_1665 2014971 .. 2014990 - -13.6  -3.73414   CATAGCAGAGTGAAA            CGCCTCCT GATA AGGAGGCG             TTTTTTCTTATGCTT  93 33
    PAJ_1664 2013589 .. 2013601 -  -4.9  -3.64257   ATATAATTAAATTAA                TGATA GGG TATCA                ATTTTAGTCTTTTAA  57 423
    PAJ_1663 NONE
        pppA NONE
    PAJ_1661 NONE
    PAJ_1660 NONE
    PAJ_1659 NONE
    PAJ_1658 NONE
    PAJ_1657 NONE
        clpV NONE
        pknA 2000762 .. 2000778 -  -2.3  -3.15013   ACGTGAGAACATAGA              CATACCT GTT AAATATG              GGGATCAAGTAACCA  43 17
    PAJ_1654 1998292 .. 1998302 -  -5.4  -2.77999   GACCCACCAATATCA                 GCTT CAA AAGC                 AAGCAAATAATAATG  49 424
    PAJ_1653 NONE
    PAJ_1652 NONE
    PAJ_1651 1991650 .. 1991668 -  -4.5  -3.38812   TGGCTGGGAACAATA             CGCATGC CGATC GCATTCG             TTGAATTTTGCAGAC  52 366
    PAJ_1650 NONE
    PAJ_1649 1988636 .. 1988663 - -12.8  -5.03961   AACCAAACAAGAAAA        CAAGGGTGCTAA ACTT TAAGCACCCTTG         TTTATTAAATTACAG 100 418
    PAJ_1648 NONE
    PAJ_1647 1986778 .. 1986789 -  -7.2  -3.45027   AGGCGGCAGGAAACA                GCGC AAAA GCGC                 CTTCATTAAACTGAT  64 60
        rhsD 1981576 .. 1981597 -  -6.6  -4.38712   GTCATTTTGATAAAA           CGCCAAAG TAGATG CTTTGGCA            GAGTGTAAGACTACG  74 293
        fryA NONE
        frwB NONE
        fruA 1976395 .. 1976417 -  -4.8  -2.94561   GTCTAATAAATAGCA           GGGAAACTCA GGA TGGGTTTCCA           GTACCTGAATAAGAT  49 170
        ybgG NONE
        licR NONE
    PAJ_1640 1970557 .. 1970583 -  -3.8  -2.58544   TGCCATGGTGATAAC         CTCCTGAATTAA TCG TTCATTCAAAAG         CTCATCTGAGTGGGG  44 219
         ibp 1970013 .. 1970041 - -10.2  -2.50074   CGCTTGATAACATAG        TGCGGAGAGCGC TGTTC ACGCTCCCCGCT        GTCGGGTCAAACTGC  69 43
        fepC 1968493 .. 1968508 -  -8.2  -2.71364   TGAGGTCGTTAATGA              CCGCCC GCTC AGGCGG               TGCATTAAAGGTAAC  61 144
        yadT 1967628 .. 1967638 -  -3.2  -4.24963   CAGAAGGACGCAAAA                 GCAC AAG ATGC                 AATAAAAACGGTAAG  60 50
        fecD 1966457 .. 1966467 -  -2.6   -2.5294   TATTTGTCAGAATAC                 TATT ATT AATA                 CCTCCTGATACTTTC  40 214
        hemH 1962753 .. 1962782 - -22.3  -5.00616   TGCGCGTCTAAAAAA       CGGGGCCAGAATG CACA CATTCTGGCCCCG        TCACGGCTGGCGTTA 100 75
        pemI 1961355 .. 1961367 - -10.5  -3.00239   AGTGAAACAGTAAAC                CCCGC TGC GCGGG                CAAAGTTTCCGCCGT  72 180
        yedJ 1957614 .. 1957634 -  -6.8  -5.08824   TTGGGATGTAAAAAA            GCCGCC AGTGTTAAA GGCGGC            TTTTGATCGTTTTGC  87 387
         vsr 1953355 .. 1953383 -  -3.7  -3.21099   TTCGGTCATCAGCAA        CGGGTTATGTCTG CAT CAGCCGCAACGCG        TCATCCTCGACGAAG  46 407
        yedI 1952208 .. 1952234 - -13.8  -4.65933   TATGTCGAAAACAAA         TCAGGCGGATAA GAA TTATCCGCCTGG         GGCGCTGAGTGGATT 100 215
        yodC 1951854 .. 1951887 - -13.2  -3.11325   GAGAGTGTAATAAAT     CCAGTCAGGCCGCC GTCGTT AACGGCCTGACTGA      CAGAAATCAGGAAGT  88 32
        dsrB 1948394 .. 1948425 - -16.7  -2.63073   CGCTGTCAATAACAC      TCGCCCTCTGAGCC GAACA GGC-CAGAGGGCGA      TTTTGTGATGGTCTG 100 58
    PAJ_1608 1936024 .. 1936052 -  -3.7  -4.34402   TGCTGCACAGCAAAA        CGATCAGGAAGCT TAC AGCGTCCAGCTCA        GCAAAGATGAGATGG  63 432
        fliE 1933829 .. 1933842 -  -2.3  -5.24416   TAAGGATAAGAAAAA               GCAGC GCTG GATGC                CCTATCACAAACACG  76 114
        yaiB 1930776 .. 1930792 -  -4.4  -3.87815   GCTGAGCCGGATAAA             GCCGTCG CTGC CGA-GGC              CATAGAACGTTATCT  57 240
        yedD 1929684 .. 1929705 -  -8.1  -2.96711   GGCATAAGTCAGAGA           CCATTACCA CCGA TGATAATGG            CAGCGCGCTGTTTAG  58 166
        fliC 1924766 .. 1924785 - -13.6  -6.09888   CGGCAATAAAAAAAA            CGCCCTCA TTGC TGAGGGCG             TTTTTATTAATACAG 100 53
        fliC 1923526 .. 1923545 - -12.2  -5.07011   GACACAAATGAAAAA            CGCCTTCA TAAC TGAAGGCG             TTTTTGTTAATACAG 100 53
        fliC 1922240 .. 1922259 - -13.6   -5.8187   CAGGCAATAAAAAAA            CGCCCTCA TCAC TGAGGGCG             TTTTTATTAATACAG 100 53
        fliC 1920470 .. 1920489 - -13.6  -5.65513   GATTAAGCAAAAAAA            CGCCCTCA GAAA TGAGGGCG             TTTTTATTAATACAG 100 53
    PAJ_1593 NONE
        rfbC 1913010 .. 1913020 -  -2.4  -3.08294   CTTCATATAAAGAAC                 CCGC CTC GCTG                 ACTTACCGCTGTGGC  42 59
        spsC 1911763 .. 1911790 -  -7.1  -4.17516   GGTAAAGGAGACAAA        CATGCCAGA TACGCGCACC TCTGGCATG         TTTATTTATTAACAT  73 58
         maa NONE
    PAJ_1589 1909455 .. 1909470 -  -7.6  -2.83164   GTATCCAGCATGATA              TCGAAG GTAT CTTCGA               GTGCGGCGATCATGC  59 193
        fabG NONE
        fabG NONE
    PAJ_1586 NONE
    PAJ_1585 NONE
        fadD NONE
    PAJ_1583 NONE
    PAJ_1582 1902319 .. 1902335 -    -8  -4.79752   GTTAATAATATAAAA              GGTGCT TTATT AGCACC              TTTTTATCATACAAC  85 99
    PAJ_1577 1897723 .. 1897739 -  -4.4  -2.55351   GCTCTGTACAGGAAG              GCTAAC GTAAT GTCAGC              AAACGCTGCCGTGTG  44 10
        fliA NONE
        fliZ 1896217 .. 1896252 -  -9.8  -3.05844   TGCTGCAGCGCAACA    TCCCCATTTTCCCC CGCGAAGT GGGAAAAATGGGGG     TGGGAGACATCATGT  69 76
        dcyD 1895067 .. 1895083 -  -5.1  -3.06796   CGTTATTTTACCTAA              GGCGTTA AAA TAACGGC              TGAATTATAACCCTT  51 55
        fliY NONE
        yecS NONE
        yecC 1892734 .. 1892756 - -13.4  -3.67558   GAGACAGCGCAATAA           GCGCCGCCAA CTT CTGGCGGCAC           CGGGTTTATTGATTA  93 31
        ycfT 1891415 .. 1891434 -   -15  -3.91689   AGAAAGGATACGAAA            CGGGCCAG CATG CTGGCCCG             GTACGTCAGGATGAT 100 31
        ycfT 1888211 .. 1888232 - -13.1  -3.60098   ATCGCTTACGTTAAA           GGTTCATGC CCGG GCATGAACC            TTTTTTTTGCGCTGA  89 381
        putP 1882268 .. 1882289 - -13.7  -5.78622   GCAGGCCAAAAAAAA           GCCCGCCCT TTAC AGGGCAGGC            TTTTCAACACGTTCA 100 45
        ycdN 1881287 .. 1881298 -  -7.2  -3.53224   GACGCGCCTGGTAAA                CGCG TTAG CGCG                 CAGCGGCTGAGGTTC  64 18
        ycdO NONE
        ycdB 1878770 .. 1878780 -  -3.2  -5.24129   GCGGGGGATAAAAAA                 CCTG AGA CAGA                 AATACGGCACGCTGG  79 76
        phoH 1877420 .. 1877435 - -11.8  -5.38951   AACGGAGATAAAAAA              CCCGGC CGAA GCCGGG               TTTTGGTCGCTACAT 100 55
        flbD 1868263 .. 1868273 -  -3.2   -3.2511   CTTTAGTCATAAAAC                 GTCA TTG CGAC                 CACACCGCGTCACGT  46 16
        ssuA 1867174 .. 1867208 - -18.7   -3.1372   TATCCCCTACCAATA     CAAAAGGCCTGCCGG TGTAC CCGGCAGGCCCTTTA     ACACATTCACCCGTT 100 39
        otsB NONE
        otsA 1859655 .. 1859678 - -15.4   -4.1043   GTCAAATACGACAAA          CAGCAAGCCA TCCC TGGCTTGCTG           CGGCATCAGGCGAGT 100 31
        flhD NONE
        flhC 1857716 .. 1857735 - -10.7  -6.11644   GGAGGCAAAAAAAAA            GCAGCGG GATTAA CCGCTGC             TGGATGACTTCCACA 100 53
        motA NONE
        motB 1855477 .. 1855490 -  -3.8  -2.73364   TGCTCACGGGAATCA               CCTC TGCTGT GAGG                GGGCTGCTGTAGTGA  44 9
        cheA 1853471 .. 1853482 -  -7.2  -2.77899   TTTCGTTATCAATCA                GGCG GCAG CGCC                 GGCCACACGTTTTTC  57 11
        cheW 1852910 .. 1852941 - -15.2  -3.71751   ACACAAGACACAGAA      CCTCACGGGCCAGC CTGG ACTGACCCGTGAAG       AAGGATTATGCCGTA 100 31
         tsr NONE
         tsr NONE
        cheR NONE
        cheB NONE
        cheY NONE
        cheZ 1846160 .. 1846180 - -11.9  -3.03336   AAGAGAAAAGAGAAG            TGGCCTGTC AGA AACAGGCCA            TCTTAGAAGGGGCGG  78 88
        flhB NONE
        flhA NONE
        flhE 1842088 .. 1842099 -  -7.2  -3.91897   GGGGCGACCGATAAA                CGCG CGCC CGCG                 GGTTTCGCGCCCATC  69 340
        yecM 1838360 .. 1838372 -  -4.7  -3.61398   GCGCTGCTGGAAGAA                GCGGC AAA GCGGC                TTAAACGCGCGGTTG  54 51
        cutC 1836337 .. 1836360 -  -7.4  -5.00884   ATTTTGGGCAAAAAA          TACCCCAGCA AATT TACTGGGGTT           TGGTACTTGCAAACA  88 85
    PAJ_1527 1834906 .. 1834916 -  -2.4  -4.56597   GCCGTTTCGGAAAAA                 CGCG TGA CGCC                 GGCGGTGGAAGCGGT  65 441
        yrhP 1833131 .. 1833154 -  -5.2  -3.64812   CTTCAGCTAAAAAAT          CAGCTGGTCA GCGG TGGCGAGCTG           GTACTGGAAACGCTG  56 335
        aspS NONE
        nudB 1827969 .. 1827982 -  -3.7  -4.62069   TCGCCACGGGAAAAA               CGCGC AGCG GCGAG                CATTCAGATAAATTC  66 29
        yebC NONE
        ruvC 1826393 .. 1826412 - -12.2  -5.34555   TTATACCATAAAAAA            GGCTGGAT GAAT ATCCAGCC             TGATAGCGATGACGA 100 52
        ruvA 1825735 .. 1825751 -  -3.5  -3.39732   GAATTACCTCAAATA              GCGGCGC GGA GCGCTTC              ACGGATCAACGTTTC  48 2
        ruvB 1824637 .. 1824661 -  -2.6  -2.78384   CGGCGTTTTATGACA          CGCCCGCCGG CCCTT CCGTCGTGCT          GTGCGCCGCCATCCT  39 78
        znuA 1822076 .. 1822090 -  -4.2   -3.4178   ACGATCCCAGCATAA               CGCG GTGGGGG CGCG               GCAAATTATTAAATG  50 86
        yebA 1820772 .. 1820790 - -14.6  -5.76633   CCAGAGATAAAAAAA             TCGACGGC AAT GCCGTCGA             TTTTAGCGAAAAACT 100 40
        msbB 1819490 .. 1819504 -    -7  -4.45945   AGTGATGAAGGAAAA               GGCAGC GTG GCGGCC               ATGCTGGGCATGGTC  74 238
         zwf 1813899 .. 1813915 - -10.8  -5.75342   TTGGTGCAAAAAAAA              GCCCGC TCGCG GCGGGC              TGGGTGGTTATTCAA 100 33
         eda 1812993 .. 1813024 -    -7  -3.76837   GATACAACTGAAGAA      GCCGTTGCGCGTGC CGTT GCCAGCGCGGCGGC       TGTCAGCGTTCAGGG  67 99
        yebE NONE
        ptrB 1808824 .. 1808850 -  -7.8  -2.65126   GATAACGTGAAAGAT         TTGCGCCCACCG TTA CGGCAGGCGCTG         CGCAAGTGTCTTAGT  53 36
        yobA 1807416 .. 1807428 -  -4.8  -2.64274   ATGCCGTGAAATGCA                GTGC GCGCA GCAC                CAGCCACAACAGGGT  46 48
        yebZ NONE
        yebY 1805991 .. 1806017 -  -8.8  -5.58209   TGAAAGGCAAAAAAA         GACCGAACAC GATTCCT GTATTCGGTC         CAGGGAAATGGCTCT 100 204
        aglA NONE
        aglB 1799843 .. 1799874 - -15.2  -3.34398   TGTCTGCGCTAAAGA      CAGCCAGCCTGAAC GCGA ACCCAGGCTGGCTG       ACGGGCGGTCTAGCT 100 35
    PAJ_1491 1799122 .. 1799135 -  -5.2  -3.91412   AGCACACGGCAGAAA               GGCG TCGTCG CGCC                GATCAGAACGCTGCC  61 28
        dltE 1794534 .. 1794549 -  -7.5  -3.73816   AAGATGATATTCAAA              GCGGC ATACTG GCCGC               ACCAATGGGGTTTGT  67 184
        betT 1786048 .. 1786073 - -15.5  -5.44119   CCGACTCTAAAAAAA         GCCCGTAAACC ACCT GGCTTACGGGC          TGCTGACTCAGGCGT 100 33
        ycaD 1784233 .. 1784250 - -14.1  -3.76168   ATGAGAACGGAAGAA             CGCCGGC AGAA GCCGGCG              TTGTGATGTCACGAC  95 357
        yebR 1778002 .. 1778027 -  -6.9  -3.15996   GAGCAGGCATGAACA         GGCGACATTAT AATG ACAACATCGCC          AAATGCCATGCAATC  57 48
        proQ NONE
         prc 1775145 .. 1775163 - -11.7  -6.02345   TAATGATAAAAAAAA             GCACCGC GCTGG GCGGTGC             TTTGGGTAACCCGGG 100 49
        htpX 1774024 .. 1774041 - -12.7  -5.28176   TTCAGCGATAAAAAA             GGCGACG TTGC CGTCGCC              TTTTTCGTGAGGGTT 100 39
        kdgR 1771646 .. 1771661 - -11.8  -3.06915   ACTGATCGCACTGAA              GCGGGC CACG GCCCGC               TTTTTCAGTTTAAAG  78 30
        yebO 1770429 .. 1770448 -  -3.4  -4.98255   GCGGAACCACAAAAA            CCGCCTCT GGAA AGTGGCGT             ACGATCTGCTTGATG  73 482
        rrmA 1767586 .. 1767600 -  -2.1    -4.067   GTAAAGGAAGAAGAA               TGTCA TTGAC CGACA               TCGTCATCGCCCTCT  56 465
        yoaE 1762706 .. 1762724 - -13.2  -5.75342   TCCGCGCAAAAAAAA             CGCATCAC TCC GTGATGCG             TTTTATCTTCAGGTG 100 46
        yoaH 1757087 .. 1757103 -  -5.1  -5.29846   AAGTCGAAATAAAAA              TTATCGC CGC GCGTTAA              CCCCGGTTCCGGGCG  85 41
        yoaA 1754417 .. 1754442 -  -6.9  -4.46926   CATCTTAGCATAAAA         TTACGCGTCAG GTTG CTGACGAATAA          AGGCAATAGCCTGCG  74 0
        yeaZ NONE
        yeaY 1752973 .. 1752999 -   -18   -5.4659   CAATACAAATAAAAA         GCCCGGCAGCGA GCA CCGCTACCGGGC         TGAATAAAACAGGTA 100 45
        fadD 1751096 .. 1751113 -  -9.8  -5.28166   TAAAAGCAATAAAAA             CGCCGG ACAGAG CCGGCG              TTCAACCTGAATCCT 100 50
         rnd 1749800 .. 1749814 -  -4.2  -3.97834   CAACTCGACCAGAAA               GGGGAT GAT ATCTCC               ATTCTGGAACTGAAC  59 128
        ycgL 1747516 .. 1747532 - -15.1  -2.61144   TCAGGTTGCAAACAG              CGCGCCG CAG CGGCGCG              ACTGTGCAATTATTA  95 111
        ycgM NONE
        ycgN 1746121 .. 1746137 - -13.7  -4.66833   CGCTAACGTTAAAAA              GGCTGCC ACT GGCAGCC              TTTAATGTATGTGCA 100 41
        fadR 1744457 .. 1744473 -  -9.4  -6.09888   GCGGAATAAAAAAAA              CCGGAC GCCAT GTCCGG              TTTTTTATTAACGTT 100 33
        dadA NONE
        dadB 1739997 .. 1740010 -  -3.7  -3.99986   GTAAGAAAATGCAAA               GCCGG ATTA CCGCC                GTTAACTGATTTTAA  58 27
        mipA 1730073 .. 1730097 -  -9.3  -3.08278   AGAGCAGACAAACGA          TCAGAGGGCAA CGC CTGCCCTCTTA          GGGTGCAAATCAGAA  66 35
        yeaE 1729168 .. 1729188 -  -9.9  -3.84451   CGTCTGAAAGGGAAA            GTGAATTAA CGC TTAATTCAC            ACCACGTCCAGGGGC  79 22
        msrB NONE
        yeaC 1726154 .. 1726179 - -16.3  -2.76492   TCATCCACGCTAAAC         GCTTCTGTCAG CACC CTGACAGAAGC          ACCTTATCAGACTTA 100 38
        ydjA 1721806 .. 1721820 -  -4.2  -3.57406   GGGCGATCAGAAATA               GCGC ACGAACG GCGC               AGTGTCGGGATGTAT  52 2
        topB NONE
        ynjH 1718856 .. 1718867 -    -3  -4.40804   GACCATCCGACAAAA                TTTC CGGC GAAA                 GAGAAGTTTTATCGC  64 493
    PAJ_1421 1716417 .. 1716429 -  -7.7  -3.04144   GGCTGAGCCTGAACA                TCACG CAG CGTGA                ACCGGGGCGTGATGA  56 317
        ychK NONE
         hnr NONE
        galU 1712916 .. 1712930 -  -2.8  -3.50588   AGCCGATACCAAATA               CAGTGA CTT TCATTG               AGCTATCCTGTGTTT  49 45
         udg NONE
        rfbB 1710538 .. 1710553 -    -9   -5.9873   GCACCAGAAAAAAAA              GGAAGC GATC GCTTCC               TTTTTTTTATTTTCA 100 38
         tdk 1708522 .. 1708538 -  -4.4    -4.371   TGGATGAGATCAAAA              CGGAAC TGGGT ATTCCG              GCATCGATTCGTGAA  68 510
        ychE 1704939 .. 1704986 - -10.8  -3.11084   AGAGAGACAAATAAT TGCATCAATACGGTGCAAAAAA ATCG TCTTTTGCACCCTATTGGTTCA TTTCTTGTTAAATGC  76 57
        oppA NONE
        oppA 1700977 .. 1701006 -  -7.7  -5.52986   ATTGCATTAAAAAAA       GTACTGGCGGCGCG TAA CGCGCCGCC-GCTG       TTCTTGGTGTTTTAT 100 40
        oppB NONE
        oppC NONE
        oppD NONE
        oppF 1697041 .. 1697058 - -14.1  -4.24745   CACCATGAATATAAA             GCCGGGC GATT GCCCGGC              TTTTTGTTTTACAGC 100 34
        tonB 1693157 .. 1693171 -  -7.1  -3.28712   CGTCGCGGTGGACAA               CGAGG GGCAT CCTCG               CCAACTGCCAGCAGG  56 184
        ompW 1690050 .. 1690069 - -11.4  -2.92111   CGGTTAAAAAATGTA            GGGCCACA TTGA CGTGGCCC             TTTTTTTATCAGAAA  76 34
        trpH NONE
        yciO 1680890 .. 1680901 -    -3  -4.08767   GTGATGCGGTGAAAA                TGTA CGGA TACA                 GCTATATCTCCGCCA  58 336
        rluB 1678459 .. 1678480 - -15.9   -4.8048   CCCTGACAGCAAAAA           GCCGCAACG ATCA CGTTGCGGC            TTTTTTATTAATCCG 100 62
        sohB 1673983 .. 1674006 - -16.8  -3.95324   CACCTGCAATAACAA          CAAACCCGGC CGAA GCCGGGTTTG           TACTCATAACATCGG 100 29
        topA 1670739 .. 1670756 - -12.7  -5.27923   TAAGGCGAGAAAAAA             GGCCAGC GTGT GCTGGCC              TCTGAGGATTACTTT 100 34
        cysB 1669557 .. 1669573 -  -9.4  -6.23545   TTCAAACAAAAAAAA              GGCTGC GCAAG GCAGCC              TGAGACTAAGGGATT 100 52
        acnA 1665656 .. 1665675 -   -15  -3.90856   AAGTCCTGAATGAAA            CAGCCGGG TTTC CCCGGCTG             ATTTATCAGTTCAGC 100 31
        pgpB 1664015 .. 1664026 -  -5.8  -3.29471   GCCGCATCAGACGAA                GAGC TTTT GCTC                 AGTTTCAAGATAAAG  57 62
        yciS NONE
        yciM 1662430 .. 1662453 - -12.6  -3.38281   GCATTGAAAACCGAA          GACAATAACC AACA GGTTATTGTC           CATCCAGTCCGCGAA  87 18
        pyrF NONE
        yciH 1661188 .. 1661208 - -11.1  -5.60689   CTACATAATAAAAAA            CCGGGCTAC CTT GTAGTCCGG            TTTCTTCTTTCAACC 100 35
        araD NONE
        paaF 1658677 .. 1658706 -  -4.3  -4.18494   TATTTTTACGCAAAA       CCAATGCCC GCCGATCAGTTT GGGCACTGG        CTGGCTCAGCATCCT  61 57
        malX 1647822 .. 1647852 - -10.5  -3.94409   CACAGGAGTGACAAA      CGGCAAAGGCATCG TGCT CG-CACCTTTGCCG       GGTGAAGGGGGATTA  82 38
        ywfK 1645963 .. 1645977 -  -2.7  -3.53012   CTGCGCTGCTGCAAA               GCTGG TTTGC CCTGC               GTCAACAGCTGCAAG  48 351
        pspA 1635997 .. 1636015 -    -3  -3.96148   CCTGTCCAGCAGAAA             GCGGCG TCTTATT CGCTGC             GGTTCATTTTGGCTT  54 15
        pspB NONE
        pspC NONE
        pspD NONE
        ycjX NONE
        ycjF 1632614 .. 1632635 -  -6.5  -3.34398   TTGGCGCGCTAAACA           GGGAACGTT GAAT AACGGCCCC            AATCTATAGTCAGTT  59 35
        tyrR 1630791 .. 1630827 -  -6.5  -2.94232   CTGCGCTGAAATAAT    GGCCACAGCGGATAAGC CAG ACTTATCCGCTGCGTTT    TATTCGTTGTCGCCG  55 25
        ycjG 1628862 .. 1628879 -  -8.4  -2.89742   GTCAACGGGGACACA             TCCGGC ATCGGA GCCGGA              AACCCAGGCGCTGTG  58 298
        mppA 1626673 .. 1626690 - -12.7  -3.70051   AAAGATGTCAAAAGA             CGGCCTG ATGT CAGGCCG              CTGTGACTTAGTGTT  90 33
        ydaN 1625381 .. 1625398 - -12.7  -6.06723   GCGGGCAAAAAAAAA             GCCGGCT AGTT AGCCGGC              GTATTTCGAATTAAA 100 224
        ydbJ NONE
        ydbH NONE
        ydbL 1618264 .. 1618279 - -11.8  -3.32844   TGTTTGACGCGAGAA              CCGGGC ATCA GCCCGG               TTTTTTTATGCCTGC  82 60
        hrpA 1613445 .. 1613468 - -10.3  -5.47431   TGAACACATAAAAAA          GCCCGCATCC ATCAA GG-TGCGGGC          TTTTTTTTACGCGAG 100 53
        pntA NONE
        pntB 1601504 .. 1601524 - -16.9  -3.63569   CGAAGCTCGCAACAA            GGGCGACAC ATT GTGTCGCCC            TTGTTTATTACAGCG 100 33
        ydaL 1598493 .. 1598505 -  -6.2  -2.52464   TTTCCCCCGAAGGGA                CGGC TCCGC GCCG                CCTGGCCCAGCAGAT  48 305
        pcaK NONE
        ydcJ 1594370 .. 1594386 -  -2.9  -2.70932   TTTTTGTTCGAACGA              CCGATCA TCC TGACCTG              GGCAAGCTGTTATTG  41 440
        pnbA 1592500 .. 1592515 -  -6.1  -2.89564   GGCGTATGGGATATA              TCGGC AGAAAG GCCGA               AAATGTAACAGCGCT  52 150
         tar 1590744 .. 1590764 - -12.6  -4.76041   TACAGGCAGTAAAAA            CCGCCTTC GCGAT GAAGGCGG            TGGTCAGATGCGGGT 100 41
        dppA NONE
        ybiI 1587404 .. 1587418 -  -5.6  -3.40522   ATGCCGGGATCATAA               GTCAGC GAA GCTGGC               TGTCTTTACTGCCGC  54 12
        ynfL 1581478 .. 1581491 -  -8.1   -3.0263   ACGATTTTGGTAATA               CTGGC AGGC GCCAG                CTGGGCCCGTTTGGA  60 282
         mlc 1580371 .. 1580384 -  -6.7  -2.80575   AAAAGGGGGAGCAGA               TTGCG TTAG CGCAA                GGTTAGTGTTGCTTA  54 38
        ynfK 1579466 .. 1579488 -   -12  -2.87541   ATCCATAATGAATCA           GGGCCGCA CGTTGGT TGCGGCCC           ACTTAATCCTGCCTC  80 120
        emrY 1574094 .. 1574124 -  -3.2  -3.88232   TCCTCTACACAATAA      TGTTCAGGGCGAC GATGAT GTCGCCCTGT-CT       TTTCCTGCCTTTTGC  55 80
        ynfA 1572948 .. 1572966 - -11.7  -3.36175   AACCCTGACCGATAA             GCCAGCC GCAAA GGCTGGC             TTTTACGCTTTGCCC  82 28
        guaD NONE
         xdh 1568592 .. 1568602 -  -3.2  -4.36914   GGCTCCTGCACAAAA                 CTGC CCT GCAA                 CAGTGCCTGTTCTAC  63 480
        yqeB NONE
         dcp 1563812 .. 1563828 - -13.7  -4.70659   TGGGATAGTCAAAAA              GGGCGGT ATC ACCGCCC              TTTCGCTTATTCGGC 100 32
    PAJ_1291 1560781 .. 1560797 -  -3.6  -4.66537   GCCCGTAATAGAAAA              GCTGCC GGGCA GGCAGT              GTTGGCTCACGGAGA  69 434
        ampC 1559095 .. 1559121 -  -7.2  -3.90112   TTCTGGGTAACGAAA        GCCGCGCTGGC GTATTT GCC-GCGCGGG         GCCTGTATCATTAAC  69 435
        eanR 1556929 .. 1556944 -  -4.6  -3.85698   TTTTTTGTTGATAAA              GCCCGC GCGC GCGAAC               TGCTGGGTGAGCACT  57 299
        yagG NONE
        bglX 1553021 .. 1553047 -  -7.2  -2.57132   TCCGGTGTCCACAAG         GGCCTCCAGCAA TAA CTGCTGCACGCC         TGGCAGATTCAGGCT  56 42
        hipB NONE
        hipA 1550299 .. 1550311 -  -4.7  -4.29738   GCAGATGCAGTAAAA                CCCTG ACG CGGGG                CACCAGAAGGCCATT  64 39
         tcp 1544964 .. 1544976 -  -6.2    -3.484   GGCAGGACAGGATAA                CGCC ATTCG GGCG                GCGGGTTGAGCGGGT  59 93
    PAJ_1275 NONE
        aldA NONE
       sardH NONE
        tdcF 1536617 .. 1536633 -  -6.5  -3.01831   CTGGCAAAAATATGA              GCGAGAC TTC ACCTCGC              AACATGAAGAGAGCC  53 504
    PAJ_1269 1532083 .. 1532103 -  -3.3  -3.13164   CCTCTAAGGAGTTAA           GCGCAGAC GGAATG GTCTGC-C            GTAAACGTGCCTGCG  46 1
    PAJ_1268 1531183 .. 1531205 -  -9.9  -4.65182   GATAAAGGAAAGAAA           CTTAACGCG GTTTG CGCGCTAAG           AAGTCATCTGCGATT  91 4
        yaaU NONE
    PAJ_1266 NONE
        fabG 1528130 .. 1528158 -  -8.1  -2.70932   GCGCCCGGTTAAGCA        GCGCCAGCTGC TGCAGGC GGAGCTGACGC        TGGGGCAGATTGTTT  58 107
        yjiA NONE
    PAJ_1263 NONE
    PAJ_1262 1525040 .. 1525066 - -12.6  -3.51411   AGCCTGTGAAATTAA         TAAATACATCAT TAG ATGATGTATTTA         AATTTTCAAGTATCG  89 147
    PAJ_1254 1507249 .. 1507263 -   -10  -3.35679   CGGCCGGATGGAGAA               CGTGAC GCC GTCACG               ATTTGCGGCCTCAAC  73 49
        yddW 1497736 .. 1497769 -    -6  -2.78216   CACGGGTATTAACGA     CGCGGGTAGAAAGGC GAATT GCCTTG-TAGCCGCG     CGCCCGGGCAAGCTG  52 313
         fsr 1496246 .. 1496276 -   -14  -3.86897   GTTACGTCTGAGAAA       GGCAACAGGCAGCG ACG CGCTGCCTGTTCGC       GCGGTTTAGTTAACC 100 31
        malP NONE
        malQ 1488599 .. 1488609 -  -6.8   -4.2803   TACGCTAACTCAAAA                 GCCA GAA TGGC                 GTCCATTTTACAGAG  71 214
    PAJ_1244 1487478 .. 1487488 -  -2.4  -3.76224   CGCTGATTGAGCAAA                 GCGC GCC GGGC                 GAAGGGGAAGTCTGC  51 108
        malE NONE
        malF NONE
        malG 1478720 .. 1478739 - -12.1   -5.1615   TGAAGATTGAAAAAA            GGCGGCC ATGACG GGCCGCC             AATATTCGCATTATC 100 67
        namA 1473356 .. 1473369 -  -3.7  -2.74461   TACCGACGGGCAAAC               GCCGG ACAT CCGCC                TGATTCCCGAAGCCT  43 276
        ykkB 1471275 .. 1471307 -  -5.7  -4.27441   ACCATTATTAATAAA      TTATATGGAGTTACG GCG CAAAATTCCATATAA      AAGGGCGCTAAGGGG  69 435
    PAJ_1230 1470442 .. 1470456 -  -2.8  -4.22673   AGAGAAAATAAAACA               CTGTAC TAA GTAAAG               GATAAGGTTTCTAAA  59 355
    PAJ_1229 NONE
    PAJ_1228 1468446 .. 1468466 -  -2.5   -4.2349   TGGTTACATCGAAAA            GTGATACCC CCT GGTTATCAT            GTCTCAAAACCGGAC  57 103
        arsR 1467309 .. 1467330 -  -4.5   -3.5525   AGACAGCCCTGCAAA           CAGATATGA AAAA TCATATGTG            TTTGAGTAAATTTTT  55 39
        arsB NONE
        arsC 1465482 .. 1465497 -  -3.2  -4.07568   TGCTTGTCGGCAAAA              CGCTGA AAAA TCAGTG               ACCGGTCCGGTTGCC  58 20
        cynR 1461307 .. 1461319 -  -4.1  -4.09739   TGAAGCGCCTGAAAA                CGTTG ACA CAACA                GAAATAACTATCAGA  60 252
        yagP 1459558 .. 1459571 -  -6.7  -3.54741   CATCATCCCTGTAAA               GGGTT ATTC AACCC                ACCTCCAACACCGCC  61 89
    PAJ_1216 1458828 .. 1458842 -  -3.5  -4.17048   TCTTTGGCAAAATAA               CGATG TTGAG CACCG               GGAATGCAGGCTTTA  60 148
        lacA 1457154 .. 1457180 -  -5.1  -3.01791   ACGCGGCGGTGAATA         GCCACAGCG TACAGAAAG CACTGCGGC         AGCCTCGCTTATCTT  51 194
        ybbL NONE
        ybbM 1455098 .. 1455123 -  -4.9  -5.16071   AACGATGAACAAAAA         TTAACAAAAAA AGCA TTTTTTGCCAA          TGGTTAAGCATAAAT  80 186
        phoP 1454158 .. 1454174 -  -3.6  -3.02511   GTCACTCTCTGAACA              GGCGCA TGCGC TGCGCG              GAATGGTTGAGGCTT  44 241
        ybjG 1451073 .. 1451094 -  -5.7   -3.3506   GGGAAAGGGTCAGAA           GGGCGCGCC ACTA AGAGCACCC            GGCGTCGCCCGTTTC  57 245
        yncB 1449875 .. 1449895 - -14.1  -5.60993   GGCCTGATAAAAAAA            TGCAACGTC AGT GACGTTGCA            TTTTGCCAGCCAGAG 100 46
        katA 1441727 .. 1441744 - -12.7  -3.53779   TGCGCAAAAGAGTAA             CGGTGGC TTAC GCCACCG              TCAGATGTGCGGGTT  89 39
        leuA 1423035 .. 1423050 -    -6  -2.62263   ATCGCTTGTACATTA              CCGGCG CAGT CGCCGC               ACGCACGCTGTTTAT  48 487
        yncD 1418928 .. 1418955 -  -2.8  -2.98368   ACGCAACCCAGAAAG        GATCGGGTTATCC AGC AGATAACGC-ATC        AGAAGCCGGCATCTC  43 513
        ydcO 1415636 .. 1415650 -  -4.2  -3.10164   CCATCCAGGACTTAA               CCTTGC CCG GGAAGG               GCGAGTACCAGTCAA  48 378
        srfA NONE
        srfB NONE
        srfC 1408641 .. 1408657 -  -2.1  -4.79223   CTACATTACCAAAAA              GCAGGCG CGT CGCCTTG              GCTGGAATCCAGCGA  67 521
        acrA 1406542 .. 1406554 -  -4.1   -3.5616   GGGAAAAATCCATAA                CAACC TCA GGTTA                TCGCGCGGCAGTCGC  52 23
        mexB 1403350 .. 1403372 -  -6.9  -2.80816   GCCGGAGGGATGACA           GCAGGCGGT GTTCA ATCGCCCGC           TGTCGACTCCGTTAT  54 37
    PAJ_1172 1401836 .. 1401849 -  -9.5  -5.44119   GCGAGTGCAAAAAAA               GCCGC TGAT GCGGC                TTTTTTTATGTGTTG 100 162
         tus 1398712 .. 1398729 -  -4.1  -3.44622   CAGGCTCACAAGCAA             GGCTTAA CGCT TAAAGCC              TCGGCGCTGAAACTG  50 146
        manA 1395979 .. 1395990 -  -3.6  -3.43042   CGGCGGATGAAAAAG                CGCC CACA GGCA                 TTTTTAGCTAATAGA  48 80
        ydgA 1394385 .. 1394401 - -15.1    -5.252   CATTGGCATAAAAAA              GGCGGCC AAA GGCCGCC              TGATTCCAGAAGATA 100 45
         add 1393185 .. 1393203 -   -16  -5.85178   AATACGCAAAAAAAA             GGCCGCTG AAT CAGCGGCC             TTGTTGTTTACTGCA 100 33
        araB NONE
        araA 1383818 .. 1383837 - -11.4  -5.66684   CAAGCCATAAAAAAA            CGGGCCAG CAAT CTGACCCG             TTCGCAACGTCTCAG 100 46
        nahR 1380668 .. 1380680 -  -3.4  -2.93367   CAACAATCGTAGACA                TCAG TGGGC CTGA                GGCGTGAACAGGCGC  45 170
        rluA 1379749 .. 1379761 -  -6.2  -3.54424   GCCGAGGCGTGGAAA                CGGG ATCTG CCCG                ATGCGGAGATTCGCT  58 234
    PAJ_1153 1377758 .. 1377770 -  -2.6  -5.64304   GAAGAGAACAAAAAA                GCCC AGCAA GAGC                GTGACAAGCAGCTCA  86 500
    PAJ_1150 NONE
    PAJ_1149 NONE
        gabT NONE
         lrp 1372656 .. 1372672 -  -2.1  -3.65314   GGGAAGTGGGAACAA              CCGTCCA GTA CAGTCGG              CACCCCTCACAGAAA  50 160
        ykgD 1365133 .. 1365168 - -16.2  -2.76696   GCCCGGCCGAATAAC    CGCGAGACGATCGCCA ACCG CGGCGATTGTCTCGCA     TCATGTCCAACATTC 100 78
        yqeI NONE
    PAJ_1134 1354052 .. 1354106 - -10.9  -5.00616   TTTCGTCGTAAAAAA TGCACTGCACGACGTCAAGATTATCA ACAT TGAGA-TCTCAGCGTCGTGCAGTGGA CAAGGGTGAAAAATC 100 64
        ydgT 1346520 .. 1346534 -  -7.2  -3.31726   CGCTTTCAGACAATA               TTCTGA ACC TCAGAA               TTATACCACGTAGCG  62 26
        ydgK 1345907 .. 1345932 -  -2.5  -4.43844   TTATCATTGATAAAA         CGCGGTATCAC AACT GTGACACAACA          TTGTCTACGGACAAC  61 78
        rnfA 1345287 .. 1345303 -  -3.7  -2.65298   CGCACTCATCAGAAT              TTCACCA AAC CGGTAAA              GCCCATAAACGCCAG  42 2
        rnfB NONE
        rnfC NONE
        rnfD NONE
        rnfG NONE
        rnfE NONE
         nth 1339204 .. 1339221 - -11.3  -5.56263   ATCAGAAAATAAAAA             GCCTGTG TGTT CACAGGC              TTTATCAGACAACAC 100 48
        tppB 1336397 .. 1336408 -  -4.4  -2.74605   TTTCGTGAAAAGTCA                TGAC CTCA GTCA                 GGCTTTGTCTGCTGC  44 23
         gst 1335624 .. 1335639 - -11.8  -5.06103   AGAAGCTGTAAAAAA              GGGCCG GTTA CGGCCC               TCATCGTATCAGTTA 100 34
        ygdR NONE
        ygdI 1330823 .. 1330842 - -12.1   -5.7946   CGGGCAATAAAAAAA            GCCGCCC TGTTCG GGGCGGC             ACATTTATTAGTTTG 100 33
        ycgZ 1329392 .. 1329419 -  -9.9  -3.47307   GTAACAGCACCAGAA        GCAGTAACAGC GGTTAT GCCGCTACTGC         TCTGACAAAGATGAC  74 71
         bla 1321902 .. 1321935 - -11.7  -4.05321   GACAAAGAAAGAGAA     GATTTCCGTAACGGC CGCT GCCGCAACGGAAAGC      CGGTTGGCTCAGGCA  91 201
    PAJ_1102 1320917 .. 1320932 -    -4  -4.05788   CCGTGGCAAACGAAA              TC-GCCA ATC TGGCCGA              TGCGATTCAGGACGC  60 172
        ymgB 1319743 .. 1319759 - -13.7  -5.29782   GACAGGCATAAAAAA              GCCCCTG AAT CAGGGGC              AAATTTTTAGGGAAG 100 81
        ymdF 1317695 .. 1317711 -  -3.6  -4.18161   GAGAAAGGGTGAAAA              TCGCCA GTCCA TGGCGT              ATTACCTCCTTAAGG  60 55
        katE 1314853 .. 1314868 -  -3.9  -5.64274   TCAGGCAGAAAAAAA              CCGCC TTTAAC AGCGG               TTTTGACGCAAACAG  91 113
        treZ NONE
        treY 1310129 .. 1310141 -  -4.7  -3.45366   CTCTCAATTAACGAA                CCCCG TTA CGGTG                TTTCAATCCATGTAC  55 51
        glgX NONE
        yxbG 1307059 .. 1307075 - -12.3   -3.0263   ATTACCTGGTTAACA              GGCGTGA CGC TCACGCC              TGTTAATATTAACGC  81 84
        ycgF 1304627 .. 1304651 - -13.7  -3.70811   TGACACAATCTGAAA          CGTGCTACTAA TAT TTAGCAGCACG          TTTTATGTCCGGCAA  93 79
        slyB 1302279 .. 1302308 - -12.2  -3.51096   CAAAGAAAAGTAATA       CCGACGCACAGTG CCCGT CACCG-GCGTCGG       TGGGTGACTGTATTA  86 38
        ydhI NONE
        ydhJ NONE
        ydhK 1298278 .. 1298289 -  -7.2  -2.76087   AACATATCGCGAAAG                GCCG TGAG CGGC                 TGAGTCGGGACGTGG  54 331
        ydhM 1295416 .. 1295432 -  -5.1  -2.90496   TGGTTTTTTAAACCA              GTGGC GCTTTCA GCCAC              TGTTCGATGGTAATA  49 1
        nemA 1294232 .. 1294258 -   -13  -3.04652   TCGCCAAAGAATAAC         CGCAGCCGTGAA AGA CTCACGGCTGCC         TGCGTTTTACAGTGC  83 32
        gloA 1293714 .. 1293736 - -19.2  -3.43564   TAAGGTAAGCGAGAA           TCAGCCCGCG TTG CGCGGGCTGA           TGTTGACGGCTTAGC 100 36
         rnt 1292918 .. 1292934 - -13.7  -5.64873   CGGAATAATAAAAAA              GGCCGAC ATC GTCGGCC              TTTTCTTCGTTTAAC 100 47
        ydhO 1291332 .. 1291356 - -12.2   -5.5604   TGAACTAATAAAAAA         GCCGGGA-AGG TTTC CCTGTCCCGGC          TGCGTTCCGTCGGTA 100 58
        purR 1289898 .. 1289921 -  -9.6  -3.57144   TGGGTGATGCGCAAA          CGCTCAATCA GGAG TGGTTGAGCG           AGGATTAGCGACGGT  74 242
        ydhC 1287645 .. 1287674 -  -9.1  -2.72344   TGGTACGGCGAATCA       GGGCCCGGCACAG GAGG CGCTGGCGGGCCC        GTCACGTGTTGATCA  63 64
         cfa 1286269 .. 1286289 -  -3.1  -3.86897   GCCACGGCGCATAAA            CGGGCGCAA TCA TCGCGCCAC            CCGCAATCCCCCCTC  54 14
    PAJ_1072 1285144 .. 1285173 -  -3.5  -4.70887   TGATTAATAAAGAAA       TGAGGACTGCTTC AGAC GAAGCAGGGCTTA        GTGTAACTGGCGCGA  69 311
        mdtK 1283588 .. 1283606 -   -11   -3.0976   GCTAAGAGCGCAACA             CGCTGTCA GGG CGACAGCG             GGGACGAATATTAAC  76 156
        pykF 1281536 .. 1281551 - -10.4  -5.64304   GAAGACAATAAAAAA              GCGCCT TTGA AGGCGC               TTTTTAAAAAAGAGG 100 55
         lpp 1281001 .. 1281019 - -10.3  -6.02914   TGCAGACAAAAAAAA             TGGTGCC ACAAG GGCACCA             TTTTTAAAACCAGAA 100 44
        ydiK 1269097 .. 1269123 -  -8.8  -5.63103   CGCTAATGAAAAAAA        GGCTGGC-GAT ATCTTA ATCAGCCAGCC         CACTTAACGAGTACT 100 60
        ydiA 1265059 .. 1265091 -  -5.5  -4.39318   TAATGAAAGTCAAAA      TGACGGCAGCG GGACGTTACAG CGCCGCCGTCG      GCAAATGACTAATAC  69 34
        aroH 1263417 .. 1263428 -  -7.2  -2.64218   AGCGGCTATGAGAAT                GCGC TGAT GCGC                 GTCTGGGGAGAGCGG  53 498
        ydiZ 1249533 .. 1249552 -   -10  -3.64599   TTAGCACAGCGCAAA            GTCTGCGC CTGC GCACAGAC             TACTCTGTTGAACGT  76 25
        yniA 1248169 .. 1248186 -  -6.9  -4.70515   CACAGTGAAAAGAAA             CCCGGCA TTGA TGCCGTG              ATGCTCGATTTTATT  79 420
        yniC 1247094 .. 1247122 -  -2.3  -3.27406   CCGTCATGATAAAAC        CTGGCTGCAAAAA CTG TCGATGCATCCAG        TATAGGGATTTATCC  45 118
        ydjM 1246500 .. 1246512 -  -3.3  -2.60075   TGCCGGGCAATTAAC                GCTCA GAT TGCGC                AGAAATGAGACGGCT  42 8
        ydjN 1244921 .. 1244943 - -14.9  -4.28389   AAAAACAGAGAGAAA           GACCTGGCG GTGTA CGCCAGGTC           TGGCGTGATTAGCTG 100 34
         bcr NONE
        nadE 1241262 .. 1241273 -  -5.8  -2.52933   TCTCAAGGGATTAAT                CAGG TGCA CCTG                 GCCGTAAACCAGATG  48 349
        yddG 1238445 .. 1238455 -  -2.4  -2.96722   CTGAGATTTATAAAC                 GTCG GGT CGCC                 AGCCAGCAAAGTATT  42 7
         cho 1237082 .. 1237112 - -15.4  -2.64735   ACGGTATGGATATGA       TGTTCGGCGGTCTG AAT CTGACCGCCGATCA       AAAAACCAAAATGCA  80 420
        ompF 1228556 .. 1228576 - -10.4  -5.14563   TGGCGGATGAAAAAA            CGGCCCGT CAGAC ACAGGCCG            GGCCGTTTTGCAATG 100 52
        yulB 1219338 .. 1219349 -  -3.6  -4.21194   CGCCATTATCGAAAA                CGGC ACGC GCCA                 GGATCAGCGGGTGTT  63 219
        yiaD NONE
    PAJ_1006 NONE
    PAJ_1005 NONE
    PAJ_1004 NONE
        pppA 1200567 .. 1200578 -  -2.2  -2.54098   TCCTTTAATCAATAG                CCTG AGGG CAGA                 AAACGTGCTGAGTCA  39 7
    PAJ_1002 NONE
        pkn3 1198104 .. 1198122 -  -4.4  -4.25848   AATCCTTGAGCAAAA             CGGGTAGC CAG GCTGCCCT             TATCCTGTATTGCCG  62 45
        chaA 1195226 .. 1195241 -    -9  -5.55769   GCCGATAAGAAAAAA              GAGCGA ATAG TCGCTC               TTTTTTTTTGTCTTG 100 51
        lolB NONE
        ispE 1188051 .. 1188094 - -11.2  -3.48276   TTTGCGTCCAGAGAA TGAACG-TCATGACAGTAACC GGC GAATACTGTCGTGAACGTTCA CACGGGTATGTGAGT  79 87
         prs 1187043 .. 1187063 - -18.3  -5.23292   GGAGACAAAAGAAAA            GGCCGGGCA TAA TGCCCGGCC            TGCGAAGATTAATGT 100 34
        yedQ 1185426 .. 1185439 -  -5.3  -3.65754   ATAAAGGAGGTGAAA               GATGA AACG TCATC                ACTCACGCATGGCAG  56 283
         pth 1184556 .. 1184573 -  -4.2  -2.94099   TTCGCGCATTATACA             CAGATT CGCGAC AATCTG              GGCGATTAGACAGGC  47 31
        engD 1183301 .. 1183318 - -11.3  -5.01811   TTATGAAATGAAAAA             TCCACGC AATT GCGTGGA              TTTTATAGGGTTTTT 100 88
    PAJ_0983 1181810 .. 1181821 -  -2.2  -3.78953   ACTCCCAGCACCAAA                GAGA GAGT TCCC                 AAAATGCCCAATGAT  50 128
    PAJ_0979 NONE
        otsA 1170762 .. 1170774 -  -9.1   -3.4072   CAGCCGTTATCACAA                CGCTG TAC CAGCG                GCTGCGATTCAATAG  69 162
        yfcJ 1160731 .. 1160746 -  -6.1   -3.0873   GAAATCATGGCAACA              TCCCC AGTTGA GGGGA               TATGGACGGTGCATC  52 390
        hosA 1157984 .. 1157997 -  -3.8   -3.1505   ATCATGCCCGATCAA               GGCA CAACCC TGCC                ATTAAATCTGTTTCT  48 60
         gpo 1156889 .. 1156905 -  -5.1  -4.40358   ATCCAGGCCATAAAA              TCCCGAT CGA ACCGGAA              GCGTTCTCCGCACTG  69 468
        ribD 1152663 .. 1152683 -  -9.6  -3.18383   ATTGCTACGGACGAA            GCCGGGCC GTTCT GGCCGGGC            GGTAAGTGCCATCAC  70 110
        ymjA 1152115 .. 1152125 -  -8.2  -3.22476   ATTACCGATGAGGAA                 GCGG AAT CCGC                 ATCCTTTAGCCAACA  64 110
        yceJ NONE
    PAJ_0959 NONE
        rpoE NONE
    PAJ_0957 1145737 .. 1145757 -  -5.3  -3.53444   TCATGTGCCTTGAAA            GCGCCCCAC GCC GTTAAGCGC            TAAGGGCGTTTTTCA  56 18
        yaeR 1144028 .. 1144051 - -11.8  -2.72043   AACTGCGCCGCAAAG          GTCCGCT-CTG TGC CAGGAGCGGAC          GCTGCTTGCATCATG  75 146
        oxyR 1140262 .. 1140295 - -22.7  -3.99324   CGGTAGGACGACAAA     TGATAAAGCCGGGCA TTGC TGCCCGGCTTTATCA      GGCAACTTAAGTTGC 100 80
        fimA NONE
    PAJ_0946 NONE
    PAJ_0945 NONE
    PAJ_0944 NONE
    PAJ_0943 NONE
    PAJ_0942 NONE
        fimH 1125101 .. 1125124 -  -9.6  -2.54192   CACAGCATGACCAAT          GCCCGC-TCTG TGC CAGAAGCGGAC          CTTGCTGAACTAGGC  66 249
    PAJ_0939 1123513 .. 1123542 -  -5.7  -2.55544   CGATCAGTCAACTCA       CGTA-TCGGGAAGC GCA GCCTCCAGACCACG       ATGCATAACCCAGAT  50 330
    PAJ_0937 1121411 .. 1121426 -  -2.5  -3.73345   AATGACTAAAATTAA              TGGCG GCGAGA CACCA               ACTACAGAAAGTGTT  51 493
        lldD 1119343 .. 1119380 -  -9.2   -3.2048   TTGAAAGGTTACTAA   GTCCAACGTCCGCT CCTCGCTCAT AGCGGACATTGGCC    TGACGCCAGTCCGCT  67 277
    PAJ_0934 1115287 .. 1115298 -  -2.2  -2.74322   TTTAACGCTGTAAAC                CACC ATCC GGTA                 AAAGTTGCATTGCGA  39 127
    PAJ_0930 1109758 .. 1109771 -  -3.7  -2.78018   AGGCTGTATGAATGA               TGCGG CAAA CCGCG                TATCTGACTATTTTG  43 420
    PAJ_0925 1102946 .. 1102968 - -14.9  -3.62275   AGCGACGATCTTAAA           TGCCCCACG GGGTT CGTGGGGCA           CGATCCTTGTTACAG  95 35
        ilvD 1101755 .. 1101770 -  -4.6  -4.66953   CCAACACTGTAAAAA              GGGCTG CAGC CAGACC               TTTCGCCATTATTTA  73 258
        yeaM 1100000 .. 1100025 -  -5.5  -2.62043   CGGACAATTAAGGGA         TGAG-TGCCTGT CAG ACAGGCAGCTTA         AAAGGGGAGAATATT  48 420
        fhuA 1097170 .. 1097184 -  -2.8  -3.88396   GCTTAAATGAAAATA               CGAACA GCG TGCTCA               GACAACATTTTCCCT  54 236
        dapA 1095406 .. 1095426 -  -5.3  -5.11613   AGAGCAGTTAAAAAA            GGCGCGG GAACAAA CAGCGCC            ATTTATTGAAAAGAG  84 323
    PAJ_0919 NONE
        yjhB 1091694 .. 1091714 -  -7.5  -4.20516   GCGCCACTGAATAAA            GCACGACCA AAA CAGCCGTGC            CTTATCAGGCTAAAG  73 49
    PAJ_0917 1090703 .. 1090713 -  -6.8  -3.21938   CGAAAAGCGGACCAA                 GCGA GTT TCGC                 TTATGAGTTGAATAA  57 70
    PAJ_0914 1086413 .. 1086437 -  -8.5  -3.31726   GCTGTCTATATAACA          GCCCCACTGCG CGT CATAGTGGAGC          TTAATACATATGAAG  66 455
    PAJ_0913 1084954 .. 1084973 -  -8.5  -3.97947   CTTATTCAGGACAAA            GCGGGCC TTTCAC AGCCCGC             TACCTCACTGTGTCT  76 398
        nhaR 1077704 .. 1077714 -    -4  -4.30576   CTGGCACCAGGAAAA                 TTGA TAT TCAA                 TACGAAATTGTGCAG  62 238
        licT 1076639 .. 1076652 -  -5.9   -2.8474   CGTCATCCACAATGA               CCGGC GTTA ACCGG                CTGGATCGTTTTCTG  52 91
        bglF 1074753 .. 1074764 -  -7.2  -3.53012   GCTTTGCTCCTTAAA                CCGC CGCG GCGG                 TGAGTGTCAGAAAGG  64 9
        bglB 1073212 .. 1073244 - -19.3  -3.29268   AGAGATTGAAATACA      CTGACCTGCTGACAG CGC CTGTCAGCAGGTCAC      CTCAGTGACGTTTAA 100 46
         bah 1072182 .. 1072194 -  -3.3  -3.14132   TGCGTCGCCCATCAA                CCTGC CGG GCACG                GATTAAAGCGCGACA  46 9
    PAJ_0904 1071310 .. 1071338 -  -8.8  -3.90744   CCTGTGGTGAAATAA        CGCTCATGGCCG CATGT CGGCCATGATTG        TCACAGGTTGTGGGT  73 118
    PAJ_0901 1066942 .. 1066954 -  -6.2  -4.07568   GCCCGGCGGTTAAAA                GCGC TCAGG GCGC                ATAGTGGCGGGTACA  66 17
        eamA NONE
        yfdE 1063567 .. 1063584 -  -9.1  -3.72576   CTGCGGCCGATGAAA             GCGCC-GC GCA GCTGGCGC             TGTTTGACGTGTACC  71 194
        treA 1059491 .. 1059514 - -19.6  -5.48825   CATGATGTAAAAAAA          GGGCCCGCAG GTGA CTGCGGGCCC           TTTTTATATTGGCCA 100 52
        ycgR NONE
        ynaI 1056999 .. 1057026 -   -15  -3.68261   GCATAAGAGCTGAAA        GAGGATCG-GGCA GCG TGCCGCGATCCTC        CGTTCGTCCCGGCGC  95 41
        deoR 1052130 .. 1052141 -  -5.8  -3.16564   CGGTCAGCCGAGCAA                CGCA GAGC TGCG                 CGATCCGGCCAGAAA  52 368
        ldcA NONE
    PAJ_0884 1049509 .. 1049544 -  -6.6  -2.82516   TTGTCTACCATGACA    GCGACGCGCTGGTGCC CTGC AGCCGCAGCGCGAAGC     GTGACGTGGACGTCC  54 521
    PAJ_0882 1047179 .. 1047196 - -12.7  -4.15565   GGTATGAGGGTAAAA             CGGGAGC CAAC GCTCCCG              TTTTGAGACTTATTT 100 511
        yegW 1044575 .. 1044587 -  -3.3  -3.54459   GGAAGGGCTGGCAAA                CAGGC CGC GGCTG                GCAATCGATTTTGGG  50 480
        mexA NONE
        acrB NONE
        oprM 1035043 .. 1035057 -  -8.5  -3.06815   ACTCTCCTGAATACA               GGCCG ATATG CGGCC               CTTTTTATTGACTTA  63 210
        icaR 1033933 .. 1033946 -  -5.3  -3.50877   GCATGCGACAAAAAG               GGTTT TATC AAACC                TCCATTCAGAGTATC  54 525
        yqeH NONE
        fimA 1030038 .. 1030066 -  -3.7  -5.41143   GATTCCTCAAAAAAA        CGTGCGCCCCA TAATAAC CGTGGCGCACC        CGAACAGAACTAACG  81 35
        hifB 1029000 .. 1029013 -  -2.4  -3.74526   GCAGCAAGGCAACAA               CCTT TGACGG AAGG                CAAGGTTCCGCATCC  50 269
        hifC NONE
    PAJ_0866 NONE
        fimB 1024598 .. 1024622 - -10.1  -3.65991   ACTGTCTGAACAGAA          GATCATTGATG AGG CATCAATGTTC          AACGCCTTATTGAAG  79 100
        rluE NONE
        ymfB NONE
        trmU NONE
        ycfC 1018015 .. 1018027 -  -4.7  -3.18912   CCACTGACTCAGTAA                GCCAG TGG CAGGC                GGGATAAAAGGGCTT  50 6
        purB 1016564 .. 1016581 -  -9.1  -2.54193   CAGCAGGTTAACGCA             GACCGGC GGCA ACCGGTC              TGCAGGCAGGATTTT  63 39
        phoP NONE
        phoQ 1014334 .. 1014347 -  -3.1  -3.51329   TACCCGCAAGTATAA               CA-GCC CGC GGCGTG               AACTACTCGCGGCGA  49 28
        ycfD 1013112 .. 1013141 - -25.1  -4.66938   AGCCTGAATATAAAA       GGCCGCGTTGCCC GACA GGGCAACGCGGCC        GTTAAAACCGTGGCA 100 52
         mfd 1003481 .. 1003500 - -12.1  -5.64274   GCAGGCATAAAAAAA            GCCGCCC TGAGCG GGGCGGC             TTCGCTTGATGCTGG 100 52
    PAJ_0847 1002258 .. 1002275 - -11.3  -4.02719   CCATGAAACACGAAA             GCGCATC TCCG GATGCGC              TTTTTTTATGGGTCA  87 155
         tar  993986 ..  994011 - -13.4  -4.11216   CTGGCACGGCGAAAA         CAGCGTTGAG TCTCGG CTCAACGCTG          TTTTTTTTGCCCGAA 100 74
        yceF  980725 ..  980739 -  -9.2  -2.74605   CCCTTGTAAAAGCCA               GCCCGG TTA CCGGAC               GTACCCACCAGATTC  60 276
         rne  976124 ..  976139 - -11.8   -5.4833   GCATGCAATAAAAAA              CCCGGC CGGA GCCGGG               TTCATGTGTGCTGCT 100 49
        flgA  965078 ..  965091 -  -2.3  -3.51825   CCACCTGAATCATAA               TAGCG TAAT CGCTT                AGCTGATTCTTCTAT  47 69
        flgM NONE
        flgN  964190 ..  964214 - -10.7  -5.71712   GCGGACACAAAAAAA          GCCATCTTCTC AGC GAGATGACGGC          TTTTTTACGCCTGCC 100 103
    PAJ_0804  959629 ..  959640 -  -2.2  -4.64861   CTGGCCGAAAAGAAA                CAGC GCCG ACTG                 ATGGTGGCCTTTAAT  65 155
        yceB  957000 ..  957019 -   -15  -3.45118   GCATCTGATAAGCAA            TCCGCGCC GAAA GGCGCGGA             TCAGGCAGGCGATAA  93 56
        pyrC  955832 ..  955842 -  -6.8  -3.60505   ACTACAGTATAAATA                 TGCC GGA GGCA                 AGTGAAATTATTTTA  61 33
        dinI  955503 ..  955520 -  -8.4  -5.82172   ATGAAGATAAAAAAA             CCGGGT GGCGAA ACCCGG              CAAAAAACAGCACAG 100 47
        yceP  954587 ..  954604 - -12.7   -5.4756   AAGCCCAATAAAAAA             GGCACCC TGAA GGGTGCC              TTGCTGATGCAGCAG 100 43
        solA  953139 ..  953158 -  -2.2  -3.40611   GGTATCTTAAGAATA            TGTAGA AATAAGAA TCTACA             GAATGAAACACAAAA  45 277
        yceJ NONE
        yceI  951924 ..  951960 - -17.3  -2.62667   CCAACCCGCAAATAG    CCGGAGCCGCCTGAAGC CTG GCTTCAGGCGGCTTAAG    ATTACTGACGTACGC 100 27
        htrB  949281 ..  949292 -  -7.2  -4.87893   AACCGTAACGAAAAA                CGCC AGCT GGCG                 TGAGCGACTCTTCTC  86 422
        smvA  946991 ..  947011 -  -6.1  -4.37658   AACCTTTTCAGAAAA            CCTGCCCAC AGC ATGAACAGG            ACGATCGTGATCAGG  72 466
        msyB  946025 ..  946040 - -10.4  -4.34737   GTAGCAACGAAGAAA              GCGGCA GAAA TGCCGC               TTTTTTTACGCCCGT  90 376
        mdoC  940498 ..  940517 - -13.6  -3.33696   GCTGCTTTGAAGCAA            GGCGATCG GCAG CGATCGCC             TTATCATTAGCGCTT  91 32
        ascF  937215 ..  937227 -  -4.1  -3.53012   TGGTCTGCCGGGAAA                TAGCG CCG CACTA                GCCGGTATGGCAGGG  52 513
        araC  931606 ..  931616 -  -6.8  -4.65895   CTCCTGAGGCAAAAA                 GCCA TTG TGGC                 AAGGCTCAGCTCAGG  77 36
        ymgB  930526 ..  930539 -  -6.7  -3.01089   GAGAAAGCGAAATGA               CTCCA TCCA TGGAG                AAAGGACTATACCGT  55 32
        ybaR  928849 ..  928877 -    -8  -3.85698   GTGGCCCGCTACAAA        GCCCGCCGCCAG CAAGC CTGACTGCGGCC        TGCTGCGCTCAGGCA  70 54
    PAJ_0774  925319 ..  925336 -  -8.4   -5.4833   GCAGGCAATAAAAAA             GCAGCC GTAACA GGCTGC              TTTTTAAGGGTAATT 100 99
    PAJ_0749  890033 ..  890056 -  -3.1    -5.252   TATGGGTATAAAAAA          GACATCGCC TGACTG AGCGACATC           TTAAAGCTGTGAGCG  77 49
    PAJ_0748  888753 ..  888766 -  -2.3  -2.96042   AATAGCCATCACACA               CCTGC CTTA GCACG                AAGCCAGATGCAGAC  42 5
    PAJ_0747 NONE
    PAJ_0746  886660 ..  886677 -  -9.1  -4.42619   CAACAGGTTAGAAAA             GCCGCGA CAGG TCACGGC              GCTATAACCAATTTC  83 367
    PAJ_0745  885013 ..  885029 - -10.9  -2.62616   TCAGTTGGTAGAGCA              CGACCTT GCC AAGGTCG              GGGTCGCGAGTTCGA  72 381
        yecF  880929 ..  880941 -  -3.3  -4.04397   ACTGGCAGAAAAATA                CCGTG GTG CACGC                CGCTTCAGCCCGGAG  58 125
        cycA  876609 ..  876632 -  -4.4  -3.86935   GAAGCAGGAGAAGAA          CAGGCCGGTC GTGG GAACGGCGCG           CGCAGATAACCGCCC  57 193
        wrbA NONE
        yccJ  872022 ..  872045 - -18.2  -5.64274   TCAGCGATAAAAAAA          GCATGGCGGG ATAG CCCGCCATGC           TGCTAAACGTTCTTT 100 28
        ssdA  870578 ..  870593 - -10.4  -5.79595   CCTGAAAAGAAAAAA              CCCCGT CGAG ACGGGG               TTTTTTATTGCCGGA 100 42
        yccA  867484 ..  867499 - -11.8   -5.2197   CAGAAAAAGCAAAAA              CCCCGC CTGA GCGGGG               TTCGTATCGCGCCAG 100 50
        yccK  867004 ..  867023 -  -4.2  -4.11394   ATCGCATGGTTAAAA            GCCGGTGGG CCG CGCAC-GGC            CCATGTGGAAAAGGT  61 96
        yccW NONE
        yccV  865137 ..  865160 -  -8.9  -3.56318   GGGGCAATAACAATA          GCGGCGGCAA ACAGA TTGCCGCC-C          ACTGTTAGTGACGCA  71 30
        yccT  863848 ..  863859 -  -4.4  -3.23393   GTGTATTCCATAACA                GCAT CCTG ATGC                 AAAGGAGCAAAAACG  48 78
        mgsA  862904 ..  862926 -  -9.2  -3.54741   CATCAGCTGCGCAAA           CCCTTAAACA GCC TGGTTAAGGG           CAATAAAAAATCCAT  68 484
        yccF NONE
        yccS  858324 ..  858349 -  -7.5  -3.53012   CTGCGTCTCTGCAAA         CCGCCCAACGT GAGC ACAATGAGCGG          CTGGGTAAGGTGCGG  61 313
        sulA  857165 ..  857181 -  -2.4  -2.87683   ACAGTGTTTTATACA              TAAATT CTAAC AATTTA              CCCTGAACTTCTGTG  40 156
        ompA  855852 ..  855867 - -11.8  -5.78622   TCAGGCCAAAAAAAA              CCCCGC ATAA GCGGGG               TTTTTTCATAACGGA 100 45
        ycbZ  853355 ..  853370 -  -4.6  -2.79209   GAATCACGAATATTA              GCGAAC AGTT GTACGC               TGAGCAAACAGGATT  47 39
        fabA  852758 ..  852776 - -11.7  -3.59984   TGAAAAGGGATATAA             CCTCCGC ACTAA GCGGAGG             TTTTCGTTTCTGGGG  83 46
        ycbX  843524 ..  843544 - -11.8  -5.19212   ACCAGCAGGAAAAAA            CCACGCGC TATGC GCGCGCGG            TGTAATTCAGAGCAC 100 32
        ssuE NONE
        ssuA NONE
        ssuD NONE
        ssuC NONE
        ssuB  834311 ..  834338 - -21.4  -3.31322   CTGAATGCCTGATAA        GAAACGGCGGGC AAAT GCCCGCCGTTTC         TTTAACGCTGTTGCG 100 27
        pncB  830168 ..  830191 -  -5.8  -3.16881   GATTTATTGCAGGAA          GGCGGGGCGC GATA ACGCCCCGAT           AACAAAGACGCTAGC  55 36
        asnS  828581 ..  828613 - -12.1  -4.97402   CAAAATTTACAAAAA      TAAAAAAAGGCCGGC GAT GCCGACCTCTTTATA      TATATGAATTTCTTA 100 57
        ompF  827190 ..  827205 - -10.4   -5.4756   AACGGCAATAAAAAA              CGGAGC CGAA GCTCCG               TTTTTTGTACTGCAT 100 49
        aspC  825791 ..  825807 - -12.3   -5.4505   TCCTGCAATAAAAAA              TGGGCCA GAA TGGCCCA              TTTTTTTATACGCGA 100 46
        ycbC  814185 ..  814210 - -14.7  -3.07113   GATTACCCGATTGAA         GGATGCGCGCG GCGT CGTGCGCATCC          TTCAACGCTGTTACG  91 36
        ycaO  798999 ..  799020 - -13.1  -5.16071   AAGGATCAATAAAAA           GGCACTGAA CAGG TTCAGTGCC            TCAGGCATGATTGTC 100 72
        focA NONE
        pflB  795427 ..  795449 - -13.5  -3.05521   AGCAGACTTTGAATA           TGAGGCTCC ATGAA GGAGCCTCA           GAAAGGGCTGATGGC  86 49
        pflA  794169 ..  794181 -  -4.8  -3.35813   TGCGATGCTAACCAA                TGCC GCGAT GGCA                CCTGCCTTGTTTGTT  49 409
        trxB  783852 ..  783872 - -12.6  -5.55769   GGTGATAATAAAAAA            GGCGACTG AAAAA CAGTCGCC            TCAAACAATTAAGAT 100 56
        cydD NONE
        cydC  780270 ..  780284 -  -4.2   -3.1733   GCTTTTACAAAACTA               TAACGC AAA GCGTTG               CTGGAAACGCCAGTA  48 8
         aat  779273 ..  779292 -  -7.1  -2.97676   AGTTATGTAAAGAAC            CGTCGGC AATAAA GCCAACG             CATCGCCGTGCTTCG  59 276
        infA  778911 ..  778929 - -14.6  -4.87328   GACAGAAAGAGAAAA             GGCCGGAT AAT ATCCGGCC             TTTTTTTGTTTGCCC 100 82
        cspD  775641 ..  775661 -  -8.3  -4.86621   ATTCGCAAGTAAAAA            TGCCAGC ACGGCAG GCTGGCA            TTTTCAACGGAGCGG  88 59
        ybjE NONE
        poxB NONE
        ltaE  769479 ..  769490 -  -7.2  -3.62046   TGAGCTGGTGAACAA                CGGC TATC GCCG                 TACCCTGACCGGCCT  63 503
        ybjP  768087 ..  768101 -  -2.8  -3.54424   GGGCATTTCTGGAAA               GGCA GGCTGAA TGCC               GTCTGAACGCGTCCG  49 82
        artP NONE
        artI NONE
        artQ NONE
        artQ NONE
        artM  765044 ..  765063 - -13.6  -2.85658   GATTATAAAATTAAT            CAGGCAGG CTGC CCTGCCTG             CGGGTTAATTTCGCC  85 30
        artJ  764195 ..  764205 -  -2.4  -3.99592   ACCGATCAGCAGAAA                 CGCC GCT GGCC                 CATGAGCGTTATTCA  55 34
        grxA  754700 ..  754725 - -13.3  -2.53641   TAACCGATCATCAAG         GCGCGGCTGGCA TCA CGCCAGC-GCGC         ACTTTTCAGGACGTC  84 61
        ybjL  752208 ..  752231 -   -11  -5.68039   AAAGGCATAAAAAAA          CCCGCTGG GAAAAAGA CCAGCGGG           CTCCACAATTTGGGG 100 115
        ybjG  751323 ..  751340 - -12.7  -2.96405   TTCAGCTAAAAACAG             GGGACGC CGCG GCGTCCC              TTTTTTTAACCTTGT  83 31
    PAJ_0625  748937 ..  748970 -  -8.3  -3.28924   TATGGCGTTTTATAA     CAGCGCACGTTTTCCA CAG TGGAAAA-ATTCGCTG     TTTATTGGCGCGCTG  62 240
        yliG  745423 ..  745438 - -11.8  -4.72497   CAGGGATGAAGAAAA              GGCCGC TGCG GCGGCC               ATTTTCAAAGCATAC 100 106
        moeA NONE
        moeB  736330 ..  736351 - -15.9  -3.94877   ATCGTCTAACAAGAA           CGGGGTAGC GATG GCTACCCCG            TTATCGTTTGGGTCT 100 143
        ybiF  724521 ..  724534 -  -3.9   -3.4512   AAAGAGTTAATAATA               TGTTA AATT TAACA                ACGCTTTAAAGGTAA  52 184
         dps  723828 ..  723843 - -11.8  -5.14477   CACAGACGTAAAAAA              GGCGGG TTTC CCCGCC               TGTTGACACCTCAGT 100 49
        glnH  722742 ..  722760 - -13.2  -5.08824   TTGCGATGGAAAAAA             GCAGGGAA ATC TTCCCTGC             TGAAAAAAGTAAAAC 100 52
        glnP  721883 ..  721899 -  -6.5  -2.84919   ATCCATCGACAATCA              GCTCACC GCT GGTGATC              TCTTCCAGCTTGTTA  54 177
        glnQ  721299 ..  721321 - -14.9  -2.82516   TCTGTCACGATGAGA           CAGCAGCCC GTTAT GGGCTGCTG           TGTTAATCACTCAGG  90 36
    PAJ_0597  717760 ..  717780 -  -8.9  -2.57132   CTTTGTGCTGAGAAT            CGCCAGTTG GCC CAGCCGGCG            GTGCTGGATAACTAC  59 326
        hutF NONE
        ydjR  708413 ..  708431 -  -3.2  -4.13282   AGCACAGCTGCAAAA             TTCTGA TGATGGG TCAGAA             CAAAGCCGATCCCGA  58 406
        hutH NONE
        hutU  704508 ..  704518 -  -2.4  -3.40307   GCGACTCAATAAAAT                 CGGC GTT GCAG                 GTTATTGCATCGGTA  45 27
        idnR  700453 ..  700466 -  -2.4  -4.37886   GCAGGCGCGATAAAA               TAGC GAATGG GCTA                AATCAAAATGGAATA  61 73
        hipO  699019 ..  699049 - -11.9  -3.05022   CTGGGTAGAGAGACA      GCCGG-AGGTAGCG GTGC CGCTACCCGCCGAC       AAGTCGGCCGCCGAG  73 184
        ycgE  693557 ..  693568 -  -5.8  -3.53224   TACCGTCGGGGCAAA                GAGC CTGG GCTC                 GCCCATCATCATCGG  56 334
         dld  681507 ..  681533 - -10.8  -4.41348   TCCTCGCTAAATAAA         CGGGCGGTCA TTTTCGC TGGCCGCCCG         TTTTACTCTGTTCAG  91 56
        yohD  676238 ..  676264 -  -2.3  -4.71426   CGCCGATGAACAAAA        TGACCGATG-GCG ATG CGCACAA-GGTCA        AAATGCCTGAGATCC  69 177
    PAJ_0560  673671 ..  673686 -  -6.1  -4.57341   AATTTGGGCGAAAAA              CAGCC CATTAT GGCTG               CCAAAGCGTGACGTC  75 17
        ybiS  672289 ..  672313 -   -10  -6.22802   GGGCACAAAAAAAAA         GCCAGC-CCGG TTAA CCGGTACTGGC          TTTTTACCCTGTTAA 100 51
        pitA  669447 ..  669460 -  -3.1  -2.66274   GTTGCCATAACGAAT               CACCT GGTC AGATG                TGGATAAACAGCCCG  41 19
    PAJ_0555  668275 ..  668293 -  -2.3  -3.38294   TGTTACAGAAATATA             CCCGGCT GGAAA AACAGGG             CGATACCGGCATGTA  46 254
        ybhP NONE
        ybhO NONE
        ybhN  662357 ..  662384 - -15.6  -3.60048   TCGCCGCTAAAAAAC        GGGCTGCTCTGG TTTG CCAGAGCAGCCG         CTCCCCGGTTACGAC 100 34
        ybhK  656027 ..  656039 -  -3.3  -4.81852   GCATAACGAAGAAAA                CGGCA TCG TGCCT                CAGGGCCTGAACAAG  70 291
        braG  652199 ..  652215 -  -2.1  -3.26649   ACAGCGTTACAGCAA              CGTCCCG CTG CGCTACG              AACAGGTCAATCCAC  44 493
        bioA  647688 ..  647704 -  -2.9  -4.42238   TCATCTTAACCAAAA              GCCGG TTTACGT CCAGC              CGTTGCAACATTAAG  62 36
        ybhB  647112 ..  647149 -  -7.7  -2.77233   GGATAACCTGCAAAT   TGCCGCTTCCGTAATCGT TCG ACAGGC-CGGAAGCGGCA   TTTTTATGCGGCGAT  59 40
        ybhA  644838 ..  644850 -  -3.3  -3.53343   AATTTGCCCGTCAAA                TCGGC ATT GCGGA                TCCGTATTGCCTCGG  48 302
        modE  641359 ..  641375 -  -4.3  -4.06562   AACCGGAATGATAAA              TCAACGC AAA GCGGCGA              CGATGGCGTGGCTGG  60 9
        modF  639786 ..  639801 -  -8.2  -3.94634   TATGATGGTAAACAA              CGCCGC TGGC ACGGCG               TCAGGGCACTCAAAT  73 35
        galT NONE
        galK NONE
        galM  636309 ..  636362 -  -5.4  -2.78384   TTGCGTTCTACCATA GCGGAAAACGGCGCACTGCGTAA GTCTGTCTG TGACGCACTGCG-CGTTTTTCAC ACGGTGGCTCAGCGT  49 34
        gpmA  635429 ..  635449 - -16.9   -5.7946   GGCGCAATAAAAAAA            GGGCCAGAC ATT GTCTGGCCC            TTTTTGCACGGAAGC 100 45
        ybgS  633671 ..  633687 - -12.3  -4.77173   GCGGGATAAAATAAA              GGAGAGC CAG GCTCTCC              TTATCAGCTCAACAG 100 48
        fimZ NONE
        bvgS NONE
        zitB  629000 ..  629032 - -17.1  -3.32268   CAAGGATGTGGATAA      TCAGCGCACGAAAAC AGG GTTCTCGTGCGCTGT      CTGCTCAGTGATGAT 100 30
         ada NONE
         trg  622985 ..  622999 - -12.8  -5.60993   TCTGCCATAAAAAAA               GCGCCC TGT GGGCGC               TTGTGTGGCGTGAGG 100 52
    PAJ_0499  610469 ..  610479 -  -6.8  -3.55444   TGGTCAGCCGGTAAA                 CCAG ATT CTGG                 TTGAAGCGGCAACCG  61 486
        gltA  600667 ..  600691 - -12.2  -5.75342   TTCGGGCAAAAAAAA          CGGCTATGCC TTGTC AGCATAGCCG          TTTTGTCGTCGATGG 100 71
        kdpE  589732 ..  589746 -  -8.5  -5.37593   TGTTAAATGAAAAAA               GCGCC TAAGT GGCGC               TTTTTTTATGGCATA 100 31
        ybfF  586367 ..  586408 -  -2.9  -2.99871   GCGCAGATTAAAGTA TTGACTCTTCCCGCGGGCA ACCG CGCCCACGGCAAAAATTTA  GCGCGCCATCATACT  43 93
        ybfE NONE
        fldA  585147 ..  585203 - -11.6  -4.54727   GCGCTGAAATGAAAA CCGATGTCCTTGCGATGCGCCAGCG GCGATGTT CGCT-GCGCATGGCATGGAAAGCGG ACGAGTCGCATTTCG 100 194
         fur  584550 ..  584567 - -11.3   -5.5353   GACAGCAATAAAAAA             GCCGATG TGAA CATCGGC              TTTTTTACTTTATAC 100 51
        nagB NONE
        nagA NONE
        nagC NONE
        nagD  575647 ..  575659 -  -4.8  -3.96531   GCAGAGAGCCATAAA                GGTG AGACG CACC                ACAGAATCTGGCAGT  62 60
        asnB  573681 ..  573702 - -10.1  -5.64873   GGCAATAACAAAAAA           GATGGGCCG TATA CGGCCCATA            TTGTCACTCAGTATA 100 45
        yleA  569942 ..  569972 - -15.5  -3.60884   TGCAAAACAGCAGAA       TGTGCGGCGGC GAATGCTGG GCCGCCGCACA       AAACGAAGCATCAGG 100 36
        ybeZ NONE
        ybeY  568198 ..  568223 -  -6.8  -3.02166   CTGGTAAGGAAATTA         CGCTGCCGGC CTGTTC ACCAGCAGCA          GGGTGGCCTGAATCA  55 46
        corC NONE
         lnt  565724 ..  565746 - -15.6  -2.54059   CAGACAGATGAAGAG           GCGGCGAAAC AGC GCTTCGCCGC           AGAGGATTAGCGGTT  95 32
        gltI  564253 ..  564269 - -12.3  -5.00884   AGCTCCGGTAAAAAA              GGGTAGC AGA GCTACCC              TGAAGATTGATGAGC 100 143
        gltJ NONE
        gltK NONE
        gltL  562062 ..  562086 - -15.7  -4.18506   TGAGCCGTAAAAGAA          GCAGGCGGGCA GGG TGCCCGCCTGT          TTTTTAGTGCAGAAT 100 29
        leuS  558693 ..  558726 - -10.3  -4.25104   CCGCGCGGATGAAAA     CCACAGCCGGCGGTGA TCA CCACCGCCAGC-ATGA     CAAACAACCTGATAA  85 68
        rlpB NONE
        holA NONE
        nadD  556456 ..  556470 -    -5  -3.09581   GAAACCCGGAAGACA               GCCAAA AAA TTTAGC               GGCGCAGTATATCAC  50 48
        ybeB NONE
        ybeA NONE
        mrdA NONE
        mrdB NONE
        rlpA  551304 ..  551320 -  -7.3  -4.35885   ACTCATCATAACAAA              TGCCTGA TTT TCAGACA              TCCGGCTTAGTGAAT  76 83
        dacA  549956 ..  549981 -  -8.9  -5.36441   CCGGTACATAAAAAA         CAGGCTCCCGC CGAA GCGGGAGCATC          ATATTAACCTGTAAT 100 78
        ybeD  549618 ..  549650 -  -7.8  -3.80877   GTAGGGCAGAAAATA     CGGGTCA-GC-GCG TTATCTG CGCAGCCTGACCCG     CTGACCGGTGTTGAC  70 45
        lipB  548815 ..  548828 -  -3.9   -2.6294   GACACCACCGATAAG               TTACA TATT TGTAA                ATACGCATTCACCGT  44 45
        lipA  547653 ..  547672 - -10.8  -5.65177   ACAGCCATAAAAAAA            CCAGATTG CGGG CAATCTGG             TTTTTTGTTTTTTAA 100 61
        eutG  540545 ..  540556 -  -7.2  -3.59979   TGCTTGCAGGTGAAA                CGCC CTTT GGCG                 GGGCGGAACAGGGGG  63 74
        ybdR  534535 ..  534559 - -20.1   -5.4251   CCCACAGATAAAAAA          CATGGGCGGGA ATC TCCCGCCCATG          TTTTTACAGCGTGGC 100 29
        ydiK  531635 ..  531649 - -11.4  -4.59773   CTTTAGTGTTAAAAA               CCCACC GAT GGTGGG               TTTTTTTATGGCTTA 100 38
        yegS  529337 ..  529352 -  -3.2  -4.13767   GTCGCTATGCTAAAA              CCTCAG CCTG CTGATG               TTGCCCGTTAAGGGT  58 33
    PAJ_0420  527189 ..  527200 -  -5.8  -4.25104   GCCTGCGTATCAAAA                GCGA TCGC TCGC                 GGGGCGGGCAGGTGC  69 387
    PAJ_0418  525217 ..  525231 -   -10  -3.14132   TGCCTGTTTGATGAA               GCCCAT TTT ATGGGC               TTTTTTTATGCACCG  70 92
        ydeU NONE
        ydhS  504106 ..  504118 -  -7.7  -3.29511   GGTACTGGGTGAGAA                CGGAT TTT ATCCG                GAGATAGTGCATTTA  59 464
    PAJ_0401  498775 ..  498790 -    -9  -3.76373   TCTGTAACAGTTAAA              CAGGCT CAAT AGCCTG               TGTACCAAACCGCCT  74 57
        rhsD  487741 ..  487770 - -10.8  -4.62069   GGCTGACGGTAAAAA       GCCGGAAG-GATC GTTAA GATCGCCTCCGGC       TATTATTATTCGTAG 100 281
    PAJ_0395 NONE
        gtrA NONE
        yfdH NONE
    PAJ_0385  458953 ..  458966 -  -3.1  -3.36452   ACCTGTGAAGATGAA               TTCAC GAAG GCGAA                TATGACGATGGGCGC  47 125
        folD NONE
        ybcJ  454138 ..  454159 - -13.7  -3.18869   GAAGAAAGGATTTAA           GGTGCCCCG GGGA CAGGGCACC            TGACGCTCAGGCAAC  88 32
        ppiB NONE
        lpxH  450160 ..  450199 -  -5.1  -3.40403   CTTCCTGGATGAGAA  GCTAACCGA-TTCGCCCT GTCAG AAGTCGAAATCGATCAGC  TGAATGCCGCTGGCA  54 4
        purE NONE
        purK  447003 ..  447031 - -21.7  -5.24531   ACGGCGCATAAAAAA        CGCCGTGCGCGGC AAG GCTGCGCACGGCG        TCAGTCCGTCTTAAA 100 36
        tesA NONE
        ybbO  442470 ..  442485 -    -6  -2.72639   ATGTTTAAAGAATAT              GGGGCC GACT GGCCCT               GCTTCAAGCTGTATT  51 53
        ybbN  441542 ..  441562 - -13.3  -3.25942   AGGTTGTCAGATGAA            CGGGCCAAA TCG TTCGGCCCG            TTTTCTGCTTACATC  88 39
        ybbK NONE
        ybbJ  439821 ..  439836 - -10.4  -4.71426   TTTCTATGAAGAAAA              GGGCGT AGTC ACGCCC               CCGCTGCGCGGCGAT  95 334
        copA  435935 ..  435949 -  -4.2  -2.72511   TTCACTGTTTGAAAG               CCACCA TGC TAGCGG               GATCCCGTTGCGAAA  44 62
        ybaP  435069 ..  435086 -  -5.5  -3.01791   ATTCCTCTTTGAAGA             GCCGATA TGAC TGTCGGC              TCTCTTTTTTTTGCC  51 46
        ybaK NONE
        ybaL  428759 ..  428794 -   -22  -4.33258   AGCCGGAAAGACAAA    CTGCCCCTCAGCAACG CTGC CGCTGCTGAAGGGCAG     GTCATTAGCTGTTGC 100 30
    PAJ_0357  423715 ..  423729 -  -3.5  -3.64703   CCGTTCTGATGCAAA               CCAGC CCCCT GCTAG               AGTCTTTAATGGAGT  53 100
        priC  419476 ..  419504 -  -2.9   -2.6914   CATGGGCCAGATAAG        CGTGCCATCCGGG AAT CCCCTCCAGCACG        GATAGCGCATTAAGT  41 35
        ybaM  418956 ..  418979 -  -8.2  -2.88544   GGCGACGGCCAGAGA          TCC-TCAGCGC CGC GCGCTAATGGA          AATTATCTTCCACAA  57 329
        acrA  417279 ..  417294 -  -2.5  -2.73799   TCGATAAAGAACTTA              GCCAT GTATCA ACGGC               TCCTGTTATGACGAT  39 31
        acrB  414104 ..  414119 - -11.8   -5.9873   TGAGGACAAAAAAAA              GGCCGC TAAC GCGGCC               TTTATGTCTACGGAT 100 40
       rpmE3 NONE
       rpmJ3  413391 ..  413420 - -13.6  -5.67063   CTGAGCATAAAAAAA       GCCGGAATGGCG GGTGAG CGACATTCCGGC        TAAGGTTCACGACAC 100 44
        ybaJ NONE
         hha  409423 ..  409435 -  -9.1  -4.95155   CCCAGATGATAAAAA                GGCGA ATC TCGCC                TGGGCCGTTCCATTG 100 103
        ybaZ  408313 ..  408327 -  -2.8  -3.96148   CGGTTGCAGGACAAA               CAGCAA CGA TTGCTC               AGCCTAACGTCAGTG  56 502
        tesB  407120 ..  407135 - -11.8  -4.76193   AACGATAAGAGAAAA              GGGGCG ATTT CGCCCC               TTTTTACTATTCGCT 100 32
       cys11 NONE
        ybaX  399146 ..  399168 - -11.9   -3.1706   AACTCATGTCATCAA           GGCGGCGGC TATCT GTCGCCGCC           GCGCCCGAGGTTACG  79 36
    PAJ_0321  389055 ..  389068 -  -9.5  -3.53012   TGCCCGCGTTTTAAA               CGGCC TTCG GGCCG                TTTTTTGCGTTTAAG  74 233
        yajG  387851 ..  387871 -  -9.6  -2.58663   ACTGACCTTGAGAAG            GGCCCGGC GTCAT GCCGGGCA            GGGGACAAAATTAGC  66 36
        ampG  386238 ..  386255 - -10.5  -2.60615   ACCGGTTTTAAATAT             CAGGGGG TAAT CCCCCCG              GTGAGTGAAATAATT  69 7
        cyoA NONE
        cyoB NONE
        cyoC NONE
        cyoD NONE
        cyoE  381111 ..  381138 -   -15  -5.07486   CAGTCGTAACAAAAA        GAAA-GGGCGCGA AAA TCGCGCCCGTTTC        ATGCTGTTGCAGTAC 100 44
        yajR  379554 ..  379573 -  -8.6  -5.52384   GCCGGATGAAAAAAA            GGTG-CCTG AAG CAGGGCACC            TTTTTCACGTGGTTT 100 112
        acoR  374617 ..  374636 -  -4.8  -3.05715   AAGCGCGGCATTGAA            GGCGCGGC CCTG GACGTGCC             GGAAGAAATTGAGCA  47 275
        panE NONE
        thiJ  372712 ..  372759 - -11.3  -4.08216   TTACCGCCCTTAAAA GGCA-CGCTGTGCCCGCGCACCC GACC GGG-AAGCGGGCACAGTGCTACC TGTACCGCTTTTCAG  87 51
        xseB NONE
        ispA NONE
         dxs  367930 ..  367970 - -14.9  -3.13403   TGGTTTTCATGAAGA  CTCCTGCTATGTCTAACCC AGG GGATTAAGCATAGCAGGAA  TGACGCGCTCCACAG  91 57
        yajO  366960 ..  366971 -  -7.2  -3.35679   CCCGCTTACTGATAA                CCCG TTGC CGGG                 TGCGGTTGATAGGCC  62 4
    PAJ_0300  365900 ..  365912 -  -6.2  -3.15579   CGAAGCCCTGATCAA                GCGC CACCT GCGC                CCAATGCCGCGCATT  55 420
        yajI  361602 ..  361626 - -15.8  -5.31275   TTGCATGATAAAAAA          GCCGCCAGTT CAGAC AACTGGCGGC          TTTTTTTTGTCTTTA 100 38
        yajB  355432 ..  355446 -   -10   -3.8709   AAATGCGCTCACAAA               CCTGAC GCC GTCAGG               GGAAGGTTACAACTG  79 32
        suhB NONE
         agp  352987 ..  353006 -   -10  -5.26907   CAACACAAAATAAAA            TCGGCGAA ATGA CTCGCCGA             AACGGGACAGGGCAA 100 171
    PAJ_0283  351523 ..  351534 -  -7.2  -2.71011   ATTCTTCTTTAACCA                CGGG CTTG CCCG                 TGGTTTTTTCATTTC  56 39
        sbcD NONE
        sbcC NONE
        tolA  339633 ..  339647 -   -10  -3.59262   GCTGAGATTGTCAAA               CTGCTG GAG CAGCAG               GATCCCGTGGCTGCC  72 336
        rdgC  337912 ..  337934 - -12.7  -4.04071   AAAGACTAAGAAGAA           CGGCCGCAG GCAAT CTGCGGCCA           AATGCATTAACGCTG 100 32
    PAJ_0269  335548 ..  335581 - -19.5  -2.98942   AGCGGCGTACAGACA     GGCGGTCCCGCCGCC ATGA GCCCGCGGGACCGCC      AGCAGTTTGCCAATG 100 77
        proC  334038 ..  334066 -   -14  -3.04517   ATGGGCCCGTAAAAC        CGTCTGGCAAAC GGCAT GTTTGCCAGACA        TGTCGGTTAACTGCG  90 32
    PAJ_0263  328496 ..  328506 -  -6.8  -2.74947   CAATAAAAAAATGAT                 GCCT GTC AGGC                 GAAATACCAGGCGGG  54 20
        ascG  327300 ..  327320 -  -2.6  -5.44119   GCTACCGCAAAAAAA            GCTTCT TTTGGTATC AGAAGC            TGATTCGCAGTAACG  82 98
        lrhA  316233 ..  316251 -  -3.1  -3.39842   CTATTTAAAAAATCA            CTGCCAGT TCAG ACCGGC-G             AAGTCGGCCAGGGCA  47 4
        yahJ  314556 ..  314573 -  -4.9  -3.57263   ATCTTTATGGCGAAA             CCTTATC GGCA GATAAAG              TTGCCTCTATGATCG  55 208
        dbpA  312336 ..  312346 -  -8.2  -3.06696   GGTGGTTTTAAGACA                 GGCG ATA CGCC                 GCCGCCGCAGAGCAA  60 362
        cheV  310887 ..  310903 - -13.7  -4.65916   TTTACCGTAATAAAA              GGCTGCC ACT GGCAGCC              TTTTTTGTTTCCCTT 100 257
       syrM1  308330 ..  308349 -  -9.3   -3.5013   CGTTAAAGTAAGCAA            TCCCAGC CCGGCT GCTGGGA             TTTTTTGCCTGTTAC  71 74
        dhaD  285007 ..  285032 - -10.4   -2.7169   TGAAAGACCATAGGA         TCCCCCCAGC AGCGCA GCCAGGGGGA          AGTCGTTGCCCGGAG  69 70
        dhaR  282833 ..  282852 -  -2.2  -4.35742   ACCCAATGACGAAAA            TGACAAAA CGGG TTTCATCA             ACCGCATTTTTAAAT  63 236
        phoE  266511 ..  266532 - -14.5  -4.25388   GACAGGAAAAGGAAA           GGGCGAGTT TTGC AACTCGCCC            TTTTAATAGACACAT 100 129
        pepD  262313 ..  262335 - -10.7  -5.45652   AGGGGCAATAAAAAA           GGGTTTATG ATGAA CATAAACCC           TCAGAGACGTTATCG 100 49
        ocd2 NONE
        tdcB  259916 ..  259929 -  -2.3  -2.72461   TAATGGCGGCTAAAG               CTGGG GAAG CGCAG                TAAGTTGGTGATTTA  39 190
        rbsA NONE
        rbsC NONE
    PAJ_0216  255818 ..  255849 - -15.8   -3.5393   AGGACGTCGGCGAAA      GTCAGGCCGCGCCA GGGA TGGCGCGTCCTGGC       GGTCCGGCAGAAATC 100 358
        yafK  253130 ..  253151 - -11.6  -3.91798   TAACGGGGAATGAAA           CCTGGCAC CGGATC GTGCCAGG            CGAATGGGCTTTATT  83 36
        fadE  249061 ..  249079 - -14.6  -5.67063   GGCAGGATAAAAAAA             GGCCGACA TGA TGTCGGCC             TGATTGTTTATGCCG 100 33
    PAJ_0209  246248 ..  246259 -  -3.6  -4.08216   CGATCTGGGCGAAAA                CCCG GATG CGGA                 AACGGTCATCAACGC  60 462
        ybdL  243548 ..  243558 -  -2.4   -3.5365   CTAAAGTCGACATAA                 CCGC TCC GCTG                 CCGCATCAAGTGTGG  47 0
        yafV  242738 ..  242777 - -11.4  -2.84051   CGACCTGCAGTAAAC  GCCT-GAATCGCCCCCGGC CTG GCCGGGGGCGATTTTATTC  TGCCAACGTAAAGCC  76 20
         ggt  231469 ..  231482 -  -5.2  -3.33922   ACTCCTGTCAAAAAC               CGGC GGCGCT GCCG                TTGCTACGCGGATCG  54 4
        gatA  229364 ..  229416 - -11.8  -2.62263   ACGCGCGGCAGAGCA CGGTCCCGCCGGAAAGCCAGCCGG GGATG CCGCCTCGCTTTCCTGAGGGGCCT GCACTGGTCACCGGG  75 481
    PAJ_0190  227538 ..  227558 - -10.3  -2.52464   CGGCCGGTTAAGCCA            CGCAGGGCG GAA CGCCCCGTG            TGGCCTGAGCCTATC  69 57
        glnQ NONE
        htxA NONE
        fliY  219130 ..  219146 - -13.7  -3.75115   CCTCCAGAAAATGAA              CGCGTGC CCG GCACGCG              TTTGAGATTAAGGCT  93 33
        fucA  218262 ..  218304 - -10.5  -4.86001   AGCACTGGATAAAAA CGCATCCCGCTTCAGAAGCG TAAT CGCTTCCGG-GCGGCAAGCG CGTGGCGGCAAAAGG 100 100
        pucI  214137 ..  214154 -  -7.7  -5.86061   GGCTATTAAAAAAAA             CGACTCC AGTC AGAGTCG              TTTATATGGTTATTG 100 69
        fsaB  213045 ..  213076 -   -13  -3.13522   ATGTTGTGATTAATA      TGCGCCTCGTTCCC GACG GGGAACAAAGCGCG       GAGCGGTAGTTCAGT  84 255
        rnhA  211642 ..  211658 -  -2.2  -3.99481   CTGAGCAAAAGACAA              TTGCCC CAGAC GGTCAA              CGCGACGCGCCAGTT  55 56
        gloB  210395 ..  210406 -  -4.4  -4.07885   GATCGTGGGGTAAAA                TTGC AGCA GCAA                 ACTTCAGATTGGATA  60 166
        mltD  208693 ..  208710 - -11.3  -5.64873   TCGAATAAGAAAAAA             GGCTGAC ATTT GTCAGCC              TTTTCAACGTATCAG 100 37
        yafC  206488 ..  206509 - -11.6   -3.6715   CCACTTAATTGGAAA           GCCCTGAC TTAACG GTCAGGGC            TTTTTCCATTTCTGA  85 106
        metN NONE
        metI NONE
        metQ  197271 ..  197289 -   -16  -4.06384   GCGCAATATCAGAAA             GGGCGGCT ATA AGCCGCCC             TGAGGAGAGATGTAA 100 48
        rcsF NONE
        yaeB  196080 ..  196093 -  -2.3  -3.34716   TCACTGGCTAAAAAG               CGGGT TTTA ACGCG                GATCGATAGCCACCA  45 18
        proS  194251 ..  194267 - -13.7  -6.15828   TTCAGCAAAAAAAAA              CGCCCCT TAA AGGGGCG              TTATAGTGCGGTTAC 100 37
        yaeP NONE
         rof  193048 ..  193074 -  -9.3   -2.7728   TTGAAACCTGAATGA         GGTGGGCGGGA GTGCA TCCCGCCCGAC         GGGAAGTGAATTACT  65 36
    PAJ_0156  187541 ..  187553 -  -5.5  -3.77196   TGACCAGCTATTAAA                CCGAC TCC GTCAG                TCCCTGGAACCTCAT  59 419
    PAJ_0139  169539 ..  169550 -  -7.2  -4.24413   CTGACCAAGAAAGAA                GCGC TGAT GCGC                 GCTCGTGAACTGGCC  74 440
         map  167993 ..  168007 -  -9.2  -5.71983   GTAACCATAAAAAAA               CCGGCA GAG CGCCGG               CCTTTTATCAGGGGA 100 45
        glnD NONE
        dapD  164379 ..  164401 - -15.6  -3.02684   CTGTAAACAAAAGAT           GACGGGCTGC CGT ACAGCCCGTC           CGACAGATTAGTCGA 100 33
        yaeH  163740 ..  163780 - -16.2  -5.45652   ATTGCCAATAAAAAA  GGCCAGACGCGTCAAGTG AATCA CACTTAATGCGGCTGGCC  TGATGTAAATCTGAA 100 45
        mtnN  157228 ..  157251 - -16.8  -2.94099   GTGGGGCAGCATACA          GGCTGCTGCT CAAC AGCAGCAGCC           AGCACAACAACAGCC 100 43
        btuF  156024 ..  156082 -  -5.6  -4.19506   ACCCTAACGCCAAAA CCACCTGCGGCTGCGGGTCGTCATTCAG TAT CTGATTATCGGGCCGCCTCAGCGGGCGG CCTCGGCTACCATTC  66 425
        hemL  154215 ..  154232 - -12.7  -5.75342   GCTCGTTAAAAAAAA             GACCGGC GTTT GCCGGTC              TGCATTTTTTACAGC 100 34
        ligT  142441 ..  142452 -  -7.2  -2.53409   GATTAAGGCAGTAAG                GGCC AACT GGCC                 AGCGTGCGGTAGCGG  56 1
        sfsA  141684 ..  141715 -  -2.3  -2.63079   CCCTGACAGAAGGTA      GTCATATCACAGA AGGATG CCAGTGATATTAC       AATGTTACGTCAACC  39 22
        dksA  140949 ..  140987 - -21.2  -3.15249   CATAGGCGTTATGAA   TCACACGGCGGAAAAAGT GGG ACTTCTTCCGCCGTGTGG   CTGCAGTCAGACGGC 100 45
        gluQ  140008 ..  140030 -  -2.7  -3.10597   GGGTGTAGGTAAAAT          CAGC-GGCTA ATCA TAGCCTGTTG           TGAATCATTTGAGAA  45 50
        pcnB NONE
        folK NONE
        panB  137248 ..  137262 -  -8.5  -3.13639   AACTTCAGCAATATA               GCGGC GGATG GCCGC               CCGGATGTCGCCGGT  64 175
        panC NONE
        panD  135860 ..  135875 - -10.4  -5.64274   TGACGGACAAAAAAA              GCAGCG ATAT CGCTGC               TTTTTTTATGTGGGC 100 46
         can  132842 ..  132878 -  -4.4  -3.24755   ACTGGGCAAAGAAAT   CACC-GACCATTACCGC GACA GCGGCAGTGATATGGTG    CTGGTGGGGCTACTT  49 521
        mdeA  131069 ..  131085 -  -4.3   -4.3739   TATTCTTTCAGAAAA              CGGCAAA CCG CCCGCCG              CCCATCGTCAGGGAT  68 190
        yacC  129060 ..  129074 -  -5.6  -2.62184   CCTTTCGTGACATCA               CCCCGA AAA TCGGCG               GGACATCATAGCTAA  48 93
        speE NONE
        speD  127294 ..  127314 -  -5.3  -4.56607   TGACGAAGGAGAAAA            TGGCCCCCA ACG CAGGGGGCA            GGGCAGCGGTAGGGT  73 43
        rhlA NONE
        rhlB  124385 ..  124412 -  -8.4   -3.5882   CACAGTATTCTTAAA        GCCGCGAGCGAGG TCG CCTCGCTGGCA-C        AATATATGGATGGGC  66 272
        ycaN  114192 ..  114211 -  -2.1  -4.61231   TTACACGGGCAAAAA            TGGCGTAG TCAAT CC-CGCCA            TTAACGCATTTTTTA  63 483
        aroP  104907 ..  104917 -  -2.6  -3.17136   AACAGAAAAGAAGTA                 TTAA TGT TTAA                 TCAGCAGGATGAGCG  45 153
        yicJ NONE
    PAJ_0087  102321 ..  102362 -  -8.8  -4.59773   GGGCATGGTGAAAAA GCGTTGCCTGCCTGGTT TGCATCATT AACC-GACAGGCATCGC TCTCAATACCATGTG  83 172
        nadC   99984 ..  100002 -   -16  -2.91702   AATAGCACAAAACAG             GCCGTGCC AGC GGCACGGC             ACAAGCCATTATTTA 100 34
        ppdD NONE
        hofB NONE
        hofC   96608 ..   96621 -  -3.8  -4.27316   CGGCCGAAGGCAAAA               CGGT GAAGCT ACCG                TTGCGCGGGCCGGTA  63 219
        coaE NONE
        yacF NONE
        yacG   93911 ..   93930 - -10.7  -3.10612   GCGAACTTTAACAGA            GTGGGGC AACAAA GCCCCAC             GTCTCACTCAGCGCT  76 33
    PAJ_0071   87215 ..   87231 -  -5.1  -3.55761   TACCGAGCTTTTAAA              TCTGGTC AAT GACGAGA              TTTTGCAGTTACAGG  56 365
        leuA NONE
        leuB NONE
        leuC NONE
        leuD   62461 ..   62485 - -12.7  -5.58454   GCCAGATGAAAAAAA          GCCCGAACGGC AGA GCCGAACGGGC          TGGTTACATTATTTA 100 45
        fadH NONE
        aroE NONE
        ydiM   57983 ..   57996 -  -3.7  -2.72379   TTAACTGTTCAACTA               GCCGC TGTA GCGGA                TTGACGGCGTGTTTC  42 5
        aroD   57165 ..   57191 - -19.6  -3.72893   GATGTCGCCAGGAAA         CATGCCCAAAGC GCG GCTTTGGGCATG         TCCGCCGCTAGGAAA 100 33
        dgoT   54728 ..   54766 - -21.2  -3.65603   AAAGACGTTTAATAA  GCAC-GTTCCCCCGGCA GAACAG TGCCGGGGGAACGGTGC   TTTAGAGCACAATCC 100 27
        yabN   51573 ..   51583 -  -2.4  -3.56643   CTGACACTGTGGAAA                 GGGG CAC CCCG                 TTGAGAACGCCACAT  47 71
        tbpA NONE
        thiP NONE
        thiQ   48037 ..   48050 -  -3.7  -4.62069   GGCGCAGTGGAAAAA               CGCGC GACT GGGCG                ACGGCGTATTTGCCA  69 163
        polB NONE
        rapA   41816 ..   41833 -  -6.9  -5.44119   TCTATTCCAAAAAAA             GAGGGCC TTGC GGCCCTG              AACTTATTGATGCGT  93 29
        rluA   41152 ..   41167 -    -4  -4.80882   ATGGCAGATTAAAAA              TC-GGCA GGC TGCCTGA              AGGTCATGGCATTAC  71 3
         imp NONE
        surA NONE
        pdxA NONE
        ksgA NONE
        apaG   34149 ..   34169 - -12.5  -2.95388   TATCCAACTCAGACA            GTCGCCCGC CAG GCGGGCGAA            GGGCGCCAGTATCAA  81 37
        apaH   33231 ..   33250 - -12.2   -4.0031   ACGCGTAGTAAAGAA            CGCCTTGT TGTG ACAAGGCG             TTTTTTTATGGCTGC  95 44
    PAJ_0023   29006 ..   29037 - -11.6  -3.18383   AGCGCGATTGATCAA      TGCTCCCCTGCCAGC GCT GC-GGCAGGGGAAAA      TGGCTCGCTGCATGC  79 42
        rpsT   15103 ..   15117 -  -8.5  -5.64274   GCAGGCATAAAAAAA               CCGGC TTAGC GCCGG               TTCTTTCAACAAAGC 100 57
    PAJ_0009    9781 ..    9793 -  -6.2  -4.13767   GTTGTTAGCGTAAAA                GGCG CTGCC CGCC                TCAATGCAGAATAAG  66 26
        yaaH    9147 ..    9176 - -18.7  -4.01564   TAAAACAGGCATAAA       CACGCACGCGGAGC CGG GCTCCGCGTGC-TG       CCTCGACCATTTGCT 100 40
        yaaA    4922 ..    4934 -  -4.7  -3.96327   ATTCTGGATCAGAAA                CTGGC ATT GCCTG                CCGAGCTGGCTGAGC  59 186
