PAJ_p0001	SSF103481	Multidrug resistance efflux transporter EmrE
PAJ_p0002	SSF103481	Multidrug resistance efflux transporter EmrE
PAJ_p0004	SSF88713	Glycoside hydrolase/deacetylase
PAJ_p0005	SSF50486	FMT C-terminal domain-like
PAJ_p0005	SSF51735	NAD(P)-binding Rossmann-fold domains
PAJ_p0005	SSF53328	Formyltransferase
PAJ_p0006	SSF53448	Nucleotide-diphospho-sugar transferases
PAJ_p0007	SSF53383	PLP-dependent transferases
PAJ_p0008	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
PAJ_p0012	SSF46894	C-terminal effector domain of the bipartite response regulators
PAJ_p0012	SSF52172	CheY-like
PAJ_p0013	SSF47384	Homodimeric domain of signal transducing histidine kinase
PAJ_p0013	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
PAJ_p0014	SSF111369	HlyD-like secretion proteins
PAJ_p0015	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
PAJ_p0015	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
PAJ_p0015	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
PAJ_p0016	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
PAJ_p0017	SSF110857	Gamma-glutamyl cyclotransferase-like
PAJ_p0018	SSF103481	Multidrug resistance efflux transporter EmrE
PAJ_p0019	SSF46689	Homeodomain-like
PAJ_p0021	SSF53474	alpha/beta-Hydrolases
PAJ_p0022	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
PAJ_p0022	SSF51735	NAD(P)-binding Rossmann-fold domains
PAJ_p0025	SSF53383	PLP-dependent transferases
PAJ_p0026	SSF53659	Isocitrate/Isopropylmalate dehydrogenase-like
PAJ_p0027	SSF56796	Dehydroquinate synthase-like
PAJ_p0030	SSF50939	Sialidases
PAJ_p0031	SSF51197	Clavaminate synthase-like
PAJ_p0032	SSF51735	NAD(P)-binding Rossmann-fold domains
PAJ_p0033	SSF51182	RmlC-like cupins
PAJ_p0034	SSF53850	Periplasmic binding protein-like II
PAJ_p0036	SSF52121	Lumazine synthase
PAJ_p0037	SSF54427	NTF2-like
PAJ_p0039	SSF51735	NAD(P)-binding Rossmann-fold domains
PAJ_p0040	SSF52467	DHS-like NAD/FAD-binding domain
PAJ_p0040	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
PAJ_p0041	SSF117856	AF0104/ALDC/Ptd012-like
PAJ_p0042	SSF46785	"Winged helix" DNA-binding domain
PAJ_p0042	SSF53850	Periplasmic binding protein-like II
PAJ_p0043	SSF51735	NAD(P)-binding Rossmann-fold domains
PAJ_p0043	SSF53223	Aminoacid dehydrogenase-like, N-terminal domain
PAJ_p0044	SSF51182	RmlC-like cupins
PAJ_p0045	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
PAJ_p0048	SSF52467	DHS-like NAD/FAD-binding domain
PAJ_p0049	SSF52972	ITPase-like
PAJ_p0050	SSF56935	Porins
PAJ_p0051	SSF56935	Porins
PAJ_p0052	SSF81273	H-NS histone-like proteins
PAJ_p0053	SSF56349	DNA breaking-rejoining enzymes
PAJ_p0057	SSF55920	Creatinase/aminopeptidase
PAJ_p0058	SSF55073	Nucleotide cyclase
PAJ_p0061	SSF56784	HAD-like
PAJ_p0062	SSF51197	Clavaminate synthase-like
PAJ_p0063	SSF100950	NagB/RpiA/CoA transferase-like
PAJ_p0063	SSF46785	"Winged helix" DNA-binding domain
PAJ_p0064	SSF47413	lambda repressor-like DNA-binding domains
PAJ_p0064	SSF53822	Periplasmic binding protein-like I
PAJ_p0065	SSF55604	Glucose permease domain IIB
PAJ_p0066	SSF51445	(Trans)glycosidases
PAJ_p0067	SSF141868	EAL domain-like
PAJ_p0067	SSF55073	Nucleotide cyclase
PAJ_p0067	SSF55781	GAF domain-like
PAJ_p0069	SSF100950	NagB/RpiA/CoA transferase-like
PAJ_p0069	SSF46785	"Winged helix" DNA-binding domain
PAJ_p0070	SSF141868	EAL domain-like
PAJ_p0070	SSF54975	Acylphosphatase/BLUF domain-like
PAJ_p0071	SSF141868	EAL domain-like
PAJ_p0071	SSF55073	Nucleotide cyclase
PAJ_p0071	SSF55781	GAF domain-like
PAJ_p0073	SSF81301	Nucleotidyltransferase
PAJ_p0074	SSF55120	Pseudouridine synthase
PAJ_p0074	SSF55174	Alpha-L RNA-binding motif
PAJ_p0075	SSF103515	Autotransporter
PAJ_p0075	SSF52266	SGNH hydrolase
PAJ_p0076	SSF46689	Homeodomain-like
PAJ_p0076	SSF53697	SIS domain
PAJ_p0077	SSF56935	Porins
PAJ_p0078	SSF53807	"Helical backbone" metal receptor
PAJ_p0080	SSF53448	Nucleotide-diphospho-sugar transferases
PAJ_p0081	SSF54665	CO dehydrogenase molybdoprotein N-domain-like
PAJ_p0081	SSF56003	Molybdenum cofactor-binding domain
PAJ_p0082	SSF55447	CO dehydrogenase flavoprotein C-terminal domain-like
PAJ_p0082	SSF56176	FAD-binding/transporter-associated domain-like
PAJ_p0083	SSF47741	CO dehydrogenase ISP C-domain like
PAJ_p0083	SSF54292	2Fe-2S ferredoxin-like
PAJ_p0084	SSF81345	ABC transporter involved in vitamin B12 uptake, BtuC
PAJ_p0085	SSF81345	ABC transporter involved in vitamin B12 uptake, BtuC
PAJ_p0086	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_p0087	SSF53807	"Helical backbone" metal receptor
PAJ_p0095	SSF55298	YjgF-like
PAJ_p0097	SSF109709	KorB DNA-binding domain-like
PAJ_p0098	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_p0100	SSF53720	ALDH-like
PAJ_p0101	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_p0102	SSF53850	Periplasmic binding protein-like II
PAJ_p0103	SSF161098	MetI-like
PAJ_p0104	SSF161098	MetI-like
PAJ_p0105	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_p0106	SSF47413	lambda repressor-like DNA-binding domains
PAJ_p0106	SSF51182	RmlC-like cupins
PAJ_p0109	SSF51971	Nucleotide-binding domain
PAJ_p0109	SSF54373	FAD-linked reductases, C-terminal domain
PAJ_p0110	SSF54285	MoaD/ThiS
PAJ_p0111	SSF110399	ThiG-like
PAJ_p0112	SSF69572	Activating enzymes of the ubiquitin-like proteins
PAJ_p0113	SSF55729	Acyl-CoA N-acyltransferases (Nat)
PAJ_p0115	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
PAJ_p0116	SSF54427	NTF2-like
PAJ_p0117	SSF88697	PUA domain-like
PAJ_p0118	SSF52833	Thioredoxin-like
PAJ_p0119	SSF50475	FMN-binding split barrel
PAJ_p0120	SSF50129	GroES-like
PAJ_p0120	SSF51735	NAD(P)-binding Rossmann-fold domains
PAJ_p0122	SSF48576	Terpenoid synthases
PAJ_p0123	SSF51905	FAD/NAD(P)-binding domain
PAJ_p0124	SSF51905	FAD/NAD(P)-binding domain
PAJ_p0125	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
PAJ_p0126	SSF48576	Terpenoid synthases
PAJ_p0131	SSF51735	NAD(P)-binding Rossmann-fold domains
PAJ_p0131	SSF52283	Formate/glycerate dehydrogenase catalytic domain-like
PAJ_p0132	SSF56601	beta-lactamase/transpeptidase-like
PAJ_p0133	SSF81340	Clc chloride channel
PAJ_p0134	SSF81340	Clc chloride channel
PAJ_p0139	SSF103088	OmpA-like
PAJ_p0140	SSF141452	Hcp1-like
PAJ_p0141	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_p0141	SSF81923	Double Clp-N motif
PAJ_p0142	SSF69255	gp5 N-terminal domain-like
PAJ_p0142	SSF69279	Phage tail proteins
PAJ_p0143	SSF51261	Duplicated hybrid motif
PAJ_p0143	SSF53955	Lysozyme-like
PAJ_p0159	SSF160719	gpW/gp25-like
PAJ_p0162	SSF49777	PEBP-like
PAJ_p0163	SSF103473	MFS general substrate transporter
PAJ_p0164	SSF103473	MFS general substrate transporter
PAJ_p0166	SSF54197	HIT-like
PAJ_p0168	SSF46785	"Winged helix" DNA-binding domain
PAJ_p0168	SSF53850	Periplasmic binding protein-like II
PAJ_p0169	SSF51735	NAD(P)-binding Rossmann-fold domains
PAJ_p0170	SSF51735	NAD(P)-binding Rossmann-fold domains
PAJ_p0171	SSF117457	FumA C-terminal domain-like
PAJ_p0173	SSF51395	FMN-linked oxidoreductases
PAJ_p0173	SSF51905	FAD/NAD(P)-binding domain
PAJ_p0173	SSF56425	Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain
PAJ_p0174	SSF143631	ApbE-like
PAJ_p0175	SSF52172	CheY-like
PAJ_p0176	SSF103190	Sensory domain-like
PAJ_p0176	SSF55785	PYP-like sensor domain (PAS domain)
PAJ_p0176	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
PAJ_p0176	SSF55890	Sporulation response regulatory protein Spo0B
PAJ_p0178	SSF51905	FAD/NAD(P)-binding domain
PAJ_p0181	SSF53383	PLP-dependent transferases
PAJ_p0182	SSF53383	PLP-dependent transferases
PAJ_p0183	SSF46689	Homeodomain-like
PAJ_p0183	SSF48498	Tetracyclin repressor-like, C-terminal domain
PAJ_p0184	SSF90123	ABC transporter transmembrane region
PAJ_p0185	SSF55681	Class II aaRS and biotin synthetases
PAJ_p0185	SSF82649	SufE/NifU
PAJ_p0187	SSF51905	FAD/NAD(P)-binding domain
PAJ_p0188	SSF46626	Cytochrome c
PAJ_p0189	SSF103190	Sensory domain-like
PAJ_p0189	SSF55073	Nucleotide cyclase
PAJ_p0190	SSF55469	FMN-dependent nitroreductase-like
PAJ_p0192	SSF55729	Acyl-CoA N-acyltransferases (Nat)
PAJ_p0193	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
PAJ_p0195	SSF103481	Multidrug resistance efflux transporter EmrE
PAJ_p0196	SSF46689	Homeodomain-like
PAJ_p0196	SSF48498	Tetracyclin repressor-like, C-terminal domain
PAJ_p0198	SSF50331	MOP-like
PAJ_p0198	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_p0199	SSF53850	Periplasmic binding protein-like II
PAJ_p0200	SSF161098	MetI-like
PAJ_p0201	SSF161098	MetI-like
PAJ_p0202	SSF56300	Metallo-dependent phosphatases
PAJ_p0203	SSF46785	"Winged helix" DNA-binding domain
PAJ_p0203	SSF53850	Periplasmic binding protein-like II
PAJ_p0204	SSF69118	AhpD-like
PAJ_p0205	SSF55331	Tautomerase/MIF
PAJ_p0207	SSF52833	Thioredoxin-like
PAJ_p0208	SSF52833	Thioredoxin-like
PAJ_p0209	SSF53681	Aspartate/glutamate racemase
PAJ_p0210	SSF51182	RmlC-like cupins
PAJ_p0213	SSF53850	Periplasmic binding protein-like II
PAJ_p0214	SSF161098	MetI-like
PAJ_p0215	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_p0218	SSF160467	PH0987 N-terminal domain-like
PAJ_p0218	SSF50891	Cyclophilin-like
PAJ_p0218	SSF51230	Single hybrid motif
PAJ_p0218	SSF51246	Rudiment single hybrid motif
PAJ_p0218	SSF52440	PreATP-grasp domain
PAJ_p0218	SSF56059	Glutathione synthetase ATP-binding domain-like
PAJ_p0219	SSF51004	C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
PAJ_p0220	SSF56281	Metallo-hydrolase/oxidoreductase
PAJ_p0221	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_p0222	SSF81301	Nucleotidyltransferase
PAJ_p0223	SSF47823	lambda integrase-like, N-terminal domain
PAJ_p0223	SSF56349	DNA breaking-rejoining enzymes
PAJ_p0224	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
PAJ_p0225	SSF64518	Phase 1 flagellin
PAJ_p0226	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
PAJ_p0228	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_p0229	SSF161098	MetI-like
PAJ_p0230	SSF53850	Periplasmic binding protein-like II
PAJ_p0231	SSF47413	lambda repressor-like DNA-binding domains
PAJ_p0231	SSF51182	RmlC-like cupins
PAJ_p0232	SSF51905	FAD/NAD(P)-binding domain
PAJ_p0233	SSF51658	Xylose isomerase-like
PAJ_p0234	SSF51735	NAD(P)-binding Rossmann-fold domains
PAJ_p0234	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
PAJ_p0235	SSF51658	Xylose isomerase-like
PAJ_p0236	SSF47413	lambda repressor-like DNA-binding domains
PAJ_p0236	SSF53822	Periplasmic binding protein-like I
PAJ_p0237	SSF141868	EAL domain-like
PAJ_p0237	SSF55073	Nucleotide cyclase
PAJ_p0237	SSF55785	PYP-like sensor domain (PAS domain)
PAJ_p0238	SSF46785	"Winged helix" DNA-binding domain
PAJ_p0238	SSF53850	Periplasmic binding protein-like II
PAJ_p0239	SSF63992	Dipeptide transport protein
PAJ_p0240	SSF56266	DmpA/ArgJ-like
PAJ_p0241	SSF161098	MetI-like
PAJ_p0242	SSF161098	MetI-like
PAJ_p0243	SSF53850	Periplasmic binding protein-like II
PAJ_p0244	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_p0245	SSF51604	Enolase C-terminal domain-like
PAJ_p0245	SSF54826	Enolase N-terminal domain-like
PAJ_p0246	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAJ_p0248	SSF50475	FMN-binding split barrel
PAJ_p0249	SSF55469	FMN-dependent nitroreductase-like
PAJ_p0250	SSF53474	alpha/beta-Hydrolases
PAJ_p0251	SSF55298	YjgF-like
PAJ_p0252	SSF52499	Isochorismatase-like hydrolases
PAJ_p0253	SSF51679	Bacterial luciferase-like
PAJ_p0254	SSF46689	Homeodomain-like
PAJ_p0254	SSF48498	Tetracyclin repressor-like, C-terminal domain
PAJ_p0259	SSF64518	Phase 1 flagellin
PAJ_p0260	SSF52218	Flavoproteins
PAJ_p0262	SSF55729	Acyl-CoA N-acyltransferases (Nat)
PAJ_p0263	SSF56281	Metallo-hydrolase/oxidoreductase
PAJ_p0265	SSF53955	Lysozyme-like
PAJ_p0266	SSF53041	Resolvase-like
PAJ_p0267	SSF48208	Six-hairpin glycosidases
PAJ_p0267	SSF74650	Galactose mutarotase-like
PAJ_p0268	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
PAJ_p0268	SSF51735	NAD(P)-binding Rossmann-fold domains
PAJ_p0269	SSF51735	NAD(P)-binding Rossmann-fold domains
PAJ_p0269	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
PAJ_p0270	SSF53067	Actin-like ATPase domain
PAJ_p0275	SSF55729	Acyl-CoA N-acyltransferases (Nat)
PAJ_p0276	SSF51395	FMN-linked oxidoreductases
PAJ_p0277	SSF55729	Acyl-CoA N-acyltransferases (Nat)
PAJ_p0278	SSF48208	Six-hairpin glycosidases
PAJ_p0278	SSF74650	Galactose mutarotase-like
PAJ_p0279	SSF48600	Chorismate mutase II