Pden_0002	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Pden_0011	PWY-7206	pyrimidine deoxyribonucleotides dephosphorylation
Pden_0015	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
Pden_0016	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
Pden_0016	PWY-3162	L-tryptophan degradation V (side chain pathway)
Pden_0016	PWY-5057	L-valine degradation II
Pden_0016	PWY-5076	L-leucine degradation III
Pden_0016	PWY-5078	L-isoleucine degradation II
Pden_0016	PWY-5079	L-phenylalanine degradation III
Pden_0016	PWY-5082	L-methionine degradation III
Pden_0016	PWY-5480	pyruvate fermentation to ethanol I
Pden_0016	PWY-5486	pyruvate fermentation to ethanol II
Pden_0016	PWY-5751	phenylethanol biosynthesis
Pden_0016	PWY-6028	acetoin degradation
Pden_0016	PWY-6313	serotonin degradation
Pden_0016	PWY-6333	acetaldehyde biosynthesis I
Pden_0016	PWY-6342	noradrenaline and adrenaline degradation
Pden_0016	PWY-6587	pyruvate fermentation to ethanol III
Pden_0016	PWY-6802	salidroside biosynthesis
Pden_0016	PWY-6871	3-methylbutanol biosynthesis
Pden_0016	PWY-7013	L-1,2-propanediol degradation
Pden_0016	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Pden_0016	PWY-7118	chitin degradation to ethanol
Pden_0016	PWY-7396	butanol and isobutanol biosynthesis (engineered)
Pden_0016	PWY-7557	dehydrodiconiferyl alcohol degradation
Pden_0019	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
Pden_0032	PWY-5964	guanylyl molybdenum cofactor biosynthesis
Pden_0035	PWY-6899	base-degraded thiamin salvage
Pden_0035	PWY-7356	thiamin salvage IV (yeast)
Pden_0038	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
Pden_0038	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
Pden_0038	PWY-6897	thiamin salvage II
Pden_0038	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
Pden_0038	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
Pden_0038	PWY-7353	4-methyl-5(&beta;-hydroxyethyl)thiazole salvage (yeast)
Pden_0038	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
Pden_0039	PWY-6891	thiazole biosynthesis II (Bacillus)
Pden_0039	PWY-6892	thiazole biosynthesis I (E. coli)
Pden_0042	PWY-6910	hydroxymethylpyrimidine salvage
Pden_0042	PWY-7356	thiamin salvage IV (yeast)
Pden_0042	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
Pden_0045	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Pden_0045	PWY-6416	quinate degradation II
Pden_0045	PWY-6707	gallate biosynthesis
Pden_0060	PWY-5686	UMP biosynthesis
Pden_0087	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
Pden_0087	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
Pden_0087	PWY-6143	CMP-pseudaminate biosynthesis
Pden_0093	PWY-6143	CMP-pseudaminate biosynthesis
Pden_0093	PWY-7330	UDP-<i>N</i>-acetyl-&beta;-L-fucosamine biosynthesis
Pden_0093	PWY-7331	UDP-<i>N</i>-acetyl-&beta;-L-quinovosamine biosynthesis
Pden_0093	PWY-7332	superpathway of UDP-<I>N</i>-acetylglucosamine-derived O-antigen building blocks biosynthesis
Pden_0197	PWY-1361	benzoyl-CoA degradation I (aerobic)
Pden_0197	PWY-5109	2-methylbutanoate biosynthesis
Pden_0197	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
Pden_0197	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
Pden_0197	PWY-5177	glutaryl-CoA degradation
Pden_0197	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Pden_0197	PWY-6435	4-hydroxybenzoate biosynthesis V
Pden_0197	PWY-6583	pyruvate fermentation to butanol I
Pden_0197	PWY-6863	pyruvate fermentation to hexanol
Pden_0197	PWY-6883	pyruvate fermentation to butanol II
Pden_0197	PWY-6944	androstenedione degradation
Pden_0197	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
Pden_0197	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
Pden_0197	PWY-7007	methyl ketone biosynthesis
Pden_0197	PWY-7046	4-coumarate degradation (anaerobic)
Pden_0197	PWY-7094	fatty acid salvage
Pden_0197	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
Pden_0197	PWY-735	jasmonic acid biosynthesis
Pden_0197	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
Pden_0201	PWY-1361	benzoyl-CoA degradation I (aerobic)
Pden_0201	PWY-5109	2-methylbutanoate biosynthesis
Pden_0201	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
Pden_0201	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
Pden_0201	PWY-5177	glutaryl-CoA degradation
Pden_0201	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Pden_0201	PWY-6435	4-hydroxybenzoate biosynthesis V
Pden_0201	PWY-6583	pyruvate fermentation to butanol I
Pden_0201	PWY-6863	pyruvate fermentation to hexanol
Pden_0201	PWY-6883	pyruvate fermentation to butanol II
Pden_0201	PWY-6944	androstenedione degradation
Pden_0201	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
Pden_0201	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
Pden_0201	PWY-7007	methyl ketone biosynthesis
Pden_0201	PWY-7046	4-coumarate degradation (anaerobic)
Pden_0201	PWY-7094	fatty acid salvage
Pden_0201	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
Pden_0201	PWY-735	jasmonic acid biosynthesis
Pden_0201	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
Pden_0204	PWY-6167	flavin biosynthesis II (archaea)
Pden_0204	PWY-6168	flavin biosynthesis III (fungi)
Pden_0213	PWY-6825	phosphatidylcholine biosynthesis V
Pden_0215	PWY-4202	arsenate detoxification I (glutaredoxin)
Pden_0215	PWY-4621	arsenate detoxification II (glutaredoxin)
Pden_0284	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Pden_0284	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Pden_0395	PWY-2941	L-lysine biosynthesis II
Pden_0395	PWY-5097	L-lysine biosynthesis VI
Pden_0400	PWY-6891	thiazole biosynthesis II (Bacillus)
Pden_0400	PWY-6892	thiazole biosynthesis I (E. coli)
Pden_0400	PWY-7560	methylerythritol phosphate pathway II
Pden_0404	PWY-6617	adenosine nucleotides degradation III
Pden_0421	PWY-6012	acyl carrier protein metabolism I
Pden_0421	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
Pden_0423	PWY-7560	methylerythritol phosphate pathway II
Pden_0432	PWY-3781	aerobic respiration I (cytochrome c)
Pden_0432	PWY-4521	arsenite oxidation I (respiratory)
Pden_0432	PWY-6692	Fe(II) oxidation
Pden_0432	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Pden_0440	PWY-7396	butanol and isobutanol biosynthesis (engineered)
Pden_0499	PWY-4983	L-citrulline-nitric oxide cycle
Pden_0499	PWY-4984	urea cycle
Pden_0499	PWY-5	canavanine biosynthesis
Pden_0499	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Pden_0499	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Pden_0512	PWY-3661	glycine betaine degradation I
Pden_0512	PWY-4722	creatinine degradation II
Pden_0514	PWY-3661	glycine betaine degradation I
Pden_0514	PWY-4722	creatinine degradation II
Pden_0515	PWY-3661	glycine betaine degradation I
Pden_0515	PWY-4722	creatinine degradation II
Pden_0516	PWY-3661	glycine betaine degradation I
Pden_0516	PWY-4722	creatinine degradation II
Pden_0518	PWY-6854	ethylene biosynthesis III (microbes)
Pden_0523	PWY-5350	thiosulfate disproportionation III (rhodanese)
Pden_0524	PWY-4202	arsenate detoxification I (glutaredoxin)
Pden_0524	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
Pden_0524	PWY-6608	guanosine nucleotides degradation III
Pden_0524	PWY-6609	adenine and adenosine salvage III
Pden_0524	PWY-6611	adenine and adenosine salvage V
Pden_0524	PWY-6620	guanine and guanosine salvage
Pden_0524	PWY-6627	salinosporamide A biosynthesis
Pden_0524	PWY-6644	fluoroacetate and fluorothreonine biosynthesis
Pden_0524	PWY-7179	purine deoxyribonucleosides degradation I
Pden_0524	PWY-7179-1	purine deoxyribonucleosides degradation
Pden_0541	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
Pden_0541	PWY-6549	L-glutamine biosynthesis III
Pden_0541	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
Pden_0541	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
Pden_0543	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
Pden_0543	PWY-6148	tetrahydromethanopterin biosynthesis
Pden_0543	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
Pden_0543	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
Pden_0544	PWY-6614	tetrahydrofolate biosynthesis
Pden_0545	PWY-6749	CMP-legionaminate biosynthesis I
Pden_0551	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
Pden_0551	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
Pden_0554	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
Pden_0555	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
Pden_0558	PWY-5392	reductive TCA cycle II
Pden_0558	PWY-5537	pyruvate fermentation to acetate V
Pden_0558	PWY-5538	pyruvate fermentation to acetate VI
Pden_0558	PWY-5690	TCA cycle II (plants and fungi)
Pden_0558	PWY-5913	TCA cycle VI (obligate autotrophs)
Pden_0558	PWY-6728	methylaspartate cycle
Pden_0558	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Pden_0558	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Pden_0559	PWY-5392	reductive TCA cycle II
Pden_0559	PWY-5537	pyruvate fermentation to acetate V
Pden_0559	PWY-5538	pyruvate fermentation to acetate VI
Pden_0559	PWY-5690	TCA cycle II (plants and fungi)
Pden_0559	PWY-5913	TCA cycle VI (obligate autotrophs)
Pden_0559	PWY-6728	methylaspartate cycle
Pden_0559	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Pden_0559	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Pden_0561	PWY-1622	formaldehyde assimilation I (serine pathway)
Pden_0561	PWY-5392	reductive TCA cycle II
Pden_0561	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
Pden_0561	PWY-5690	TCA cycle II (plants and fungi)
Pden_0561	PWY-5913	TCA cycle VI (obligate autotrophs)
Pden_0561	PWY-6728	methylaspartate cycle
Pden_0561	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Pden_0561	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
Pden_0561	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
Pden_0566	PWY-5741	ethylmalonyl-CoA pathway
Pden_0566	PWY-5744	glyoxylate assimilation
Pden_0566	PWY-6728	methylaspartate cycle
Pden_0569	PWY-3781	aerobic respiration I (cytochrome c)
Pden_0569	PWY-4302	aerobic respiration III (alternative oxidase pathway)
Pden_0569	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
Pden_0569	PWY-5690	TCA cycle II (plants and fungi)
Pden_0569	PWY-6728	methylaspartate cycle
Pden_0569	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Pden_0569	PWY-7254	TCA cycle VII (acetate-producers)
Pden_0569	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Pden_0572	PWY-3781	aerobic respiration I (cytochrome c)
Pden_0572	PWY-4302	aerobic respiration III (alternative oxidase pathway)
Pden_0572	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
Pden_0572	PWY-5690	TCA cycle II (plants and fungi)
Pden_0572	PWY-6728	methylaspartate cycle
Pden_0572	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Pden_0572	PWY-7254	TCA cycle VII (acetate-producers)
Pden_0572	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Pden_0576	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
Pden_0587	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Pden_0587	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Pden_0588	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
Pden_0588	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
Pden_0588	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
Pden_0589	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Pden_0589	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Pden_0592	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
Pden_0592	PWY-6596	adenosine nucleotides degradation I
Pden_0592	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
Pden_0603	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Pden_0605	PWY-6898	thiamin salvage III
Pden_0605	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
Pden_0605	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
Pden_0611	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
Pden_0611	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
Pden_0614	PWY-6700	queuosine biosynthesis
Pden_0618	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
Pden_0619	PWY-6749	CMP-legionaminate biosynthesis I
Pden_0620	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Pden_0630	PWY-5913	TCA cycle VI (obligate autotrophs)
Pden_0630	PWY-6318	L-phenylalanine degradation IV (mammalian, via side chain)
Pden_0630	PWY-6638	sulfolactate degradation III
Pden_0630	PWY-6642	(<i>R</i>)-cysteate degradation
Pden_0630	PWY-6643	coenzyme M biosynthesis II
Pden_0630	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
Pden_0630	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
Pden_0630	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
Pden_0631	PWY-5350	thiosulfate disproportionation III (rhodanese)
Pden_0648	PWY-6936	seleno-amino acid biosynthesis
Pden_0655	PWY-6683	sulfate reduction III (assimilatory)
Pden_0660	PWY-4041	&gamma;-glutamyl cycle
Pden_0660	PWY-5826	hypoglycin biosynthesis
Pden_0669	PWY-4381	fatty acid biosynthesis initiation I
Pden_0677	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Pden_0677	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Pden_0679	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Pden_0679	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Pden_0691	PWY-3461	L-tyrosine biosynthesis II
Pden_0691	PWY-3462	L-phenylalanine biosynthesis II
Pden_0691	PWY-6120	L-tyrosine biosynthesis III
Pden_0691	PWY-6627	salinosporamide A biosynthesis
Pden_0704	PWY-2941	L-lysine biosynthesis II
Pden_0704	PWY-2942	L-lysine biosynthesis III
Pden_0704	PWY-5097	L-lysine biosynthesis VI
Pden_0707	PWY-2301	<i>myo</i>-inositol biosynthesis
Pden_0707	PWY-4702	phytate degradation I
Pden_0707	PWY-6363	D-<i>myo</i>-inositol (1,4,5)-trisphosphate degradation
Pden_0710	PWY-5028	L-histidine degradation II
Pden_0710	PWY-5030	L-histidine degradation III
Pden_0711	PWY-5028	L-histidine degradation II
Pden_0711	PWY-5030	L-histidine degradation III
Pden_0715	PWY-5028	L-histidine degradation II
Pden_0715	PWY-5030	L-histidine degradation III
Pden_0729	PWY-6832	2-aminoethylphosphonate degradation II
Pden_0737	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
Pden_0781	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Pden_0787	PWY-6157	autoinducer AI-1 biosynthesis
Pden_0811	PWY-6826	phosphatidylcholine biosynthesis VI
Pden_0839	PWY-6012	acyl carrier protein metabolism I
Pden_0839	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
Pden_0848	PWY-1281	sulfoacetaldehyde degradation I
Pden_0848	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
Pden_0848	PWY-5482	pyruvate fermentation to acetate II
Pden_0848	PWY-5485	pyruvate fermentation to acetate IV
Pden_0848	PWY-5497	purine nucleobases degradation II (anaerobic)
Pden_0848	PWY-6637	sulfolactate degradation II
Pden_0848	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
Pden_0852	PWY-5381	pyridine nucleotide cycling (plants)
Pden_0853	PWY-5381	pyridine nucleotide cycling (plants)
Pden_0853	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
Pden_0857	PWY-5971	palmitate biosynthesis II (bacteria and plants)
Pden_0857	PWY-5973	<i>cis</i>-vaccenate biosynthesis
Pden_0857	PWY-5989	stearate biosynthesis II (bacteria and plants)
Pden_0857	PWY-6113	superpathway of mycolate biosynthesis
Pden_0857	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
Pden_0857	PWY-6519	8-amino-7-oxononanoate biosynthesis I
Pden_0857	PWY-7096	triclosan resistance
Pden_0857	PWYG-321	mycolate biosynthesis
Pden_0858	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
Pden_0858	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
Pden_0862	PWY-2941	L-lysine biosynthesis II
Pden_0862	PWY-2942	L-lysine biosynthesis III
Pden_0862	PWY-5097	L-lysine biosynthesis VI
Pden_0862	PWY-6559	spermidine biosynthesis II
Pden_0862	PWY-6562	norspermidine biosynthesis
Pden_0862	PWY-7153	grixazone biosynthesis
Pden_0880	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Pden_0880	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Pden_0884	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Pden_0903	PWY-5988	wound-induced proteolysis I
Pden_0903	PWY-6018	seed germination protein turnover
Pden_0920	PWY-1622	formaldehyde assimilation I (serine pathway)
Pden_0920	PWY-181	photorespiration
Pden_0920	PWY-2161	folate polyglutamylation
Pden_0920	PWY-2201	folate transformations I
Pden_0920	PWY-3661	glycine betaine degradation I
Pden_0920	PWY-3661-1	glycine betaine degradation II (mammalian)
Pden_0920	PWY-3841	folate transformations II
Pden_0920	PWY-5497	purine nucleobases degradation II (anaerobic)
Pden_0921	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
Pden_0921	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
Pden_0921	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
Pden_0934	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
Pden_0939	PWY-5392	reductive TCA cycle II
Pden_0939	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
Pden_0939	PWY-5690	TCA cycle II (plants and fungi)
Pden_0939	PWY-5913	TCA cycle VI (obligate autotrophs)
Pden_0939	PWY-6728	methylaspartate cycle
Pden_0939	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Pden_0939	PWY-7254	TCA cycle VII (acetate-producers)
Pden_0939	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Pden_0943	PWY-5737	(5<i>R</i>)-carbapenem carboxylate biosynthesis
Pden_0943	PWY-6853	ethylene biosynthesis II (microbes)
Pden_0943	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
Pden_0951	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
Pden_0951	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Pden_0951	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
Pden_0951	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
Pden_0951	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Pden_0951	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Pden_0951	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
Pden_0951	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
Pden_1008	PWY-1281	sulfoacetaldehyde degradation I
Pden_1008	PWY-5482	pyruvate fermentation to acetate II
Pden_1008	PWY-5485	pyruvate fermentation to acetate IV
Pden_1008	PWY-5497	purine nucleobases degradation II (anaerobic)
Pden_1008	PWY-6637	sulfolactate degradation II
Pden_1010	PWY-1281	sulfoacetaldehyde degradation I
Pden_1010	PWY-6637	sulfolactate degradation II
Pden_1019	PWY-6167	flavin biosynthesis II (archaea)
Pden_1031	PWY-3722	glycine betaine biosynthesis II (Gram-positive bacteria)
Pden_1031	PWY-7494	choline degradation IV
Pden_1044	PWY-3722	glycine betaine biosynthesis II (Gram-positive bacteria)
Pden_1044	PWY-7494	choline degradation IV
Pden_1063	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Pden_1063	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Pden_1098	PWY-3722	glycine betaine biosynthesis II (Gram-positive bacteria)
Pden_1098	PWY-7494	choline degradation IV
Pden_1105	PWY-7533	gliotoxin biosynthesis
Pden_1114	PWY-5198	factor 420 biosynthesis
Pden_1115	PWY-5198	factor 420 biosynthesis
Pden_1116	PWY-5198	factor 420 biosynthesis
Pden_1117	PWY-5198	factor 420 biosynthesis
Pden_1118	PWY-5199	factor 420 polyglutamylation
Pden_1175	PWY-6185	4-methylcatechol degradation (<i>ortho</i> cleavage)
Pden_1182	PWY-6185	4-methylcatechol degradation (<i>ortho</i> cleavage)
Pden_1191	PWY-4261	glycerol degradation I
Pden_1191	PWY-6118	glycerol-3-phosphate shuttle
Pden_1191	PWY-6952	glycerophosphodiester degradation
Pden_1192	PWY-3341	L-proline biosynthesis III
Pden_1192	PWY-4981	L-proline biosynthesis II (from arginine)
Pden_1192	PWY-6344	L-ornithine degradation II (Stickland reaction)
Pden_1204	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Pden_1204	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Pden_1208	PWY-5704	urea degradation II
Pden_1209	PWY-5704	urea degradation II
Pden_1211	PWY-5704	urea degradation II
Pden_1233	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
Pden_1233	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
Pden_1245	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
Pden_1245	PWY-6507	4-deoxy-L-<i>threo</i>-hex-4-enopyranuronate degradation
Pden_1245	PWY-7242	D-fructuronate degradation
Pden_1245	PWY-7310	D-glucosaminate degradation
Pden_1275	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Pden_1275	PWY-5723	Rubisco shunt
Pden_1275	PWY-6891	thiazole biosynthesis II (Bacillus)
Pden_1275	PWY-6892	thiazole biosynthesis I (E. coli)
Pden_1275	PWY-6901	superpathway of glucose and xylose degradation
Pden_1275	PWY-7560	methylerythritol phosphate pathway II
Pden_1282	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Pden_1283	PWY-6164	3-dehydroquinate biosynthesis I
Pden_1293	PWY-6936	seleno-amino acid biosynthesis
Pden_1293	PWY-7274	D-cycloserine biosynthesis
Pden_1298	PWY-5738	GDP-6-deoxy-D-talose biosynthesis
Pden_1298	PWY-5739	GDP-D-perosamine biosynthesis
Pden_1298	PWY-5740	GDP-L-colitose biosynthesis
Pden_1298	PWY-66	GDP-L-fucose biosynthesis I (from GDP-D-mannose)
Pden_1304	PWY-7533	gliotoxin biosynthesis
Pden_1317	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
Pden_1317	PWY-2161	folate polyglutamylation
Pden_1317	PWY-2201	folate transformations I
Pden_1317	PWY-3841	folate transformations II
Pden_1318	PWY-5381	pyridine nucleotide cycling (plants)
Pden_1318	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
Pden_1319	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
Pden_1319	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
Pden_1321	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Pden_1346	PWY-5747	2-methylcitrate cycle II
Pden_1355	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
Pden_1355	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
Pden_1355	PWY-6936	seleno-amino acid biosynthesis
Pden_1355	PWY-702	L-methionine biosynthesis II
Pden_1363	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Pden_1364	PWY-6728	methylaspartate cycle
Pden_1364	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Pden_1364	PWY-7118	chitin degradation to ethanol
Pden_1364	PWY-7294	xylose degradation IV
Pden_1364	PWY-7295	L-arabinose degradation IV
Pden_1376	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
Pden_1376	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
Pden_1376	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
Pden_1384	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
Pden_1384	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Pden_1384	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
Pden_1384	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
Pden_1384	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Pden_1384	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Pden_1384	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
Pden_1384	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
Pden_1395	PWY-6832	2-aminoethylphosphonate degradation II
Pden_1397	PWY-381	nitrate reduction II (assimilatory)
Pden_1397	PWY-5675	nitrate reduction V (assimilatory)
Pden_1397	PWY-6549	L-glutamine biosynthesis III
Pden_1397	PWY-6963	ammonia assimilation cycle I
Pden_1397	PWY-6964	ammonia assimilation cycle II
Pden_1402	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
Pden_1402	PWY-6148	tetrahydromethanopterin biosynthesis
Pden_1402	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
Pden_1402	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
Pden_1408	PWY-7303	3-dimethylallyl-4-hydroxybenzoate biosynthesis
Pden_1433	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
Pden_1437	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
Pden_1437	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
Pden_1454	PWY-4061	glutathione-mediated detoxification I
Pden_1454	PWY-6842	glutathione-mediated detoxification II
Pden_1454	PWY-7112	4-hydroxy-2-nonenal detoxification
Pden_1454	PWY-7533	gliotoxin biosynthesis
Pden_1554	PWY-6167	flavin biosynthesis II (archaea)
Pden_1554	PWY-6168	flavin biosynthesis III (fungi)
Pden_1555	PWY-6167	flavin biosynthesis II (archaea)
Pden_1555	PWY-6168	flavin biosynthesis III (fungi)
Pden_1555	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
Pden_1557	PWY-6167	flavin biosynthesis II (archaea)
Pden_1557	PWY-6168	flavin biosynthesis III (fungi)
Pden_1557	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Pden_1566	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
Pden_1566	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
Pden_1566	PWY-6269	adenosylcobalamin salvage from cobinamide II
Pden_1567	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
Pden_1567	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
Pden_1567	PWY-6269	adenosylcobalamin salvage from cobinamide II
Pden_1568	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
Pden_1568	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
Pden_1568	PWY-6269	adenosylcobalamin salvage from cobinamide II
Pden_1576	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Pden_1578	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
Pden_1578	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
Pden_1579	PWY-5381	pyridine nucleotide cycling (plants)
Pden_1579	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
Pden_1580	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
Pden_1580	PWY-2161	folate polyglutamylation
Pden_1580	PWY-2201	folate transformations I
Pden_1580	PWY-3841	folate transformations II
Pden_1592	PWY-7533	gliotoxin biosynthesis
Pden_1615	PWY-7432	L-phenylalanine biosynthesis III (cytosolic, plants)
Pden_1633	PWY-6840	homoglutathione biosynthesis
Pden_1633	PWY-7255	ergothioneine biosynthesis I (bacteria)
Pden_1634	PWY-6854	ethylene biosynthesis III (microbes)
Pden_1640	PWY-1281	sulfoacetaldehyde degradation I
Pden_1640	PWY-5482	pyruvate fermentation to acetate II
Pden_1640	PWY-5485	pyruvate fermentation to acetate IV
Pden_1640	PWY-5497	purine nucleobases degradation II (anaerobic)
Pden_1640	PWY-6637	sulfolactate degradation II
Pden_1642	PWY-1281	sulfoacetaldehyde degradation I
Pden_1642	PWY-6637	sulfolactate degradation II
Pden_1649	PWY-5971	palmitate biosynthesis II (bacteria and plants)
Pden_1649	PWY-5973	<i>cis</i>-vaccenate biosynthesis
Pden_1649	PWY-5989	stearate biosynthesis II (bacteria and plants)
Pden_1649	PWY-5994	palmitate biosynthesis I (animals and fungi)
Pden_1649	PWY-6113	superpathway of mycolate biosynthesis
Pden_1649	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
Pden_1649	PWY-6519	8-amino-7-oxononanoate biosynthesis I
Pden_1649	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Pden_1649	PWYG-321	mycolate biosynthesis
Pden_1651	PWY-5971	palmitate biosynthesis II (bacteria and plants)
Pden_1651	PWY-5973	<i>cis</i>-vaccenate biosynthesis
Pden_1651	PWY-5989	stearate biosynthesis II (bacteria and plants)
Pden_1651	PWY-6113	superpathway of mycolate biosynthesis
Pden_1651	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
Pden_1651	PWY-6519	8-amino-7-oxononanoate biosynthesis I
Pden_1651	PWY-7096	triclosan resistance
Pden_1651	PWYG-321	mycolate biosynthesis
Pden_1656	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Pden_1656	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Pden_1657	PWY-6654	phosphopantothenate biosynthesis III
Pden_1672	PWY-6507	4-deoxy-L-<i>threo</i>-hex-4-enopyranuronate degradation
Pden_1678	PWY-5940	streptomycin biosynthesis
Pden_1678	PWY-7237	<i>myo</i>-, <i>chiro</i>- and <i>scillo</i>-inositol degradation
Pden_1678	PWY-7241	<I>myo</I>-inositol degradation II
Pden_1695	PWY-5484	glycolysis II (from fructose 6-phosphate)
Pden_1696	PWY-5723	Rubisco shunt
Pden_1697	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Pden_1697	PWY-5723	Rubisco shunt
Pden_1697	PWY-6891	thiazole biosynthesis II (Bacillus)
Pden_1697	PWY-6892	thiazole biosynthesis I (E. coli)
Pden_1697	PWY-6901	superpathway of glucose and xylose degradation
Pden_1697	PWY-7560	methylerythritol phosphate pathway II
Pden_1698	PWY-1042	glycolysis IV (plant cytosol)
Pden_1698	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Pden_1698	PWY-5484	glycolysis II (from fructose 6-phosphate)
Pden_1698	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Pden_1698	PWY-7385	1,3-propanediol biosynthesis (engineered)
Pden_1699	PWY-5532	adenosine nucleotides degradation IV
Pden_1699	PWY-5723	Rubisco shunt
Pden_1700	PWY-5532	adenosine nucleotides degradation IV
Pden_1700	PWY-5723	Rubisco shunt
Pden_1712	PWY-3722	glycine betaine biosynthesis II (Gram-positive bacteria)
Pden_1712	PWY-7494	choline degradation IV
Pden_1732	PWY-4061	glutathione-mediated detoxification I
Pden_1732	PWY-6842	glutathione-mediated detoxification II
Pden_1732	PWY-7112	4-hydroxy-2-nonenal detoxification
Pden_1732	PWY-7533	gliotoxin biosynthesis
Pden_1740	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
Pden_1744	PWY-7199	pyrimidine deoxyribonucleosides salvage
Pden_1746	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
Pden_1746	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
Pden_1746	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Pden_1746	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
Pden_1746	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
Pden_1746	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
Pden_1746	PWY-7205	CMP phosphorylation
Pden_1746	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
Pden_1746	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Pden_1746	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
Pden_1746	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Pden_1746	PWY-7224	purine deoxyribonucleosides salvage
Pden_1746	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
Pden_1746	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
Pden_1752	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
Pden_1752	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
Pden_1760	PWY-5101	L-isoleucine biosynthesis II
Pden_1760	PWY-5103	L-isoleucine biosynthesis III
Pden_1760	PWY-5104	L-isoleucine biosynthesis IV
Pden_1760	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Pden_1769	PWY-5367	petroselinate biosynthesis
Pden_1769	PWY-5971	palmitate biosynthesis II (bacteria and plants)
Pden_1769	PWY-5973	<i>cis</i>-vaccenate biosynthesis
Pden_1769	PWY-5989	stearate biosynthesis II (bacteria and plants)
Pden_1769	PWY-5994	palmitate biosynthesis I (animals and fungi)
Pden_1769	PWY-6113	superpathway of mycolate biosynthesis
Pden_1769	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
Pden_1769	PWY-6519	8-amino-7-oxononanoate biosynthesis I
Pden_1769	PWY-6951	Pden_1769|Pden_1769|YP_915562.1|GeneID:4580933
Pden_1769	PWY-7053	docosahexaenoate biosynthesis I (lower eukaryotes)
Pden_1769	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Pden_1769	PWYG-321	mycolate biosynthesis
Pden_1770	PWY-4381	fatty acid biosynthesis initiation I
Pden_1770	PWY-6799	fatty acid biosynthesis (plant mitochondria)
Pden_1770	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Pden_1809	PWY-7432	L-phenylalanine biosynthesis III (cytosolic, plants)
Pden_1813	PWY-6019	pseudouridine degradation
Pden_1820	PWY-7560	methylerythritol phosphate pathway II
Pden_1822	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
Pden_1822	PWY-7536	2-amino-3-hydroxycyclopent-2-enone biosynthesis
Pden_1833	PWY-7533	gliotoxin biosynthesis
Pden_1847	PWY-3781	aerobic respiration I (cytochrome c)
Pden_1847	PWY-4521	arsenite oxidation I (respiratory)
Pden_1847	PWY-6692	Fe(II) oxidation
Pden_1847	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Pden_1848	PWY-3781	aerobic respiration I (cytochrome c)
Pden_1848	PWY-4521	arsenite oxidation I (respiratory)
Pden_1848	PWY-6692	Fe(II) oxidation
Pden_1848	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Pden_1861	PWY-4381	fatty acid biosynthesis initiation I
Pden_1865	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
Pden_1873	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
Pden_1873	PWY-5912	2'-deoxymugineic acid phytosiderophore biosynthesis
Pden_1876	PWY-5484	glycolysis II (from fructose 6-phosphate)
Pden_1879	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Pden_1879	PWY-5686	UMP biosynthesis
Pden_1879	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Pden_1891	PWY-6700	queuosine biosynthesis
Pden_1896	PWY-3722	glycine betaine biosynthesis II (Gram-positive bacteria)
Pden_1896	PWY-7494	choline degradation IV
Pden_1908	PWY-5392	reductive TCA cycle II
Pden_1908	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
Pden_1908	PWY-5690	TCA cycle II (plants and fungi)
Pden_1908	PWY-5913	TCA cycle VI (obligate autotrophs)
Pden_1908	PWY-6728	methylaspartate cycle
Pden_1908	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Pden_1908	PWY-7254	TCA cycle VII (acetate-producers)
Pden_1908	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Pden_1918	PWY-1042	glycolysis IV (plant cytosol)
Pden_1918	PWY-5484	glycolysis II (from fructose 6-phosphate)
Pden_1918	PWY-6886	1-butanol autotrophic biosynthesis
Pden_1918	PWY-6901	superpathway of glucose and xylose degradation
Pden_1918	PWY-7003	glycerol degradation to butanol
Pden_1933	PWY-5344	L-homocysteine biosynthesis
Pden_1933	PWY-7174	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation II
Pden_1935	PWY-2201	folate transformations I
Pden_1935	PWY-3841	folate transformations II
Pden_1936	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
Pden_1936	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
Pden_1938	PWY-3781	aerobic respiration I (cytochrome c)
Pden_1938	PWY-4521	arsenite oxidation I (respiratory)
Pden_1938	PWY-6692	Fe(II) oxidation
Pden_1938	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Pden_1946	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
Pden_1946	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Pden_1946	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
Pden_1946	PWY-7206	pyrimidine deoxyribonucleotides dephosphorylation
Pden_1950	PWY-3801	sucrose degradation II (sucrose synthase)
Pden_1950	PWY-5054	sorbitol biosynthesis I
Pden_1950	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
Pden_1950	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
Pden_1950	PWY-5659	GDP-mannose biosynthesis
Pden_1950	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Pden_1950	PWY-621	sucrose degradation III (sucrose invertase)
Pden_1950	PWY-622	starch biosynthesis
Pden_1950	PWY-6531	mannitol cycle
Pden_1950	PWY-6981	chitin biosynthesis
Pden_1950	PWY-7238	sucrose biosynthesis II
Pden_1950	PWY-7347	sucrose biosynthesis III
Pden_1950	PWY-7385	1,3-propanediol biosynthesis (engineered)
Pden_1951	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
Pden_1951	PWY-6855	chitin degradation I (archaea)
Pden_1951	PWY-6906	chitin derivatives degradation
Pden_1952	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
Pden_1955	PWY-5101	L-isoleucine biosynthesis II
Pden_1955	PWY-5103	L-isoleucine biosynthesis III
Pden_1955	PWY-5104	L-isoleucine biosynthesis IV
Pden_1955	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Pden_1961	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Pden_1961	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Pden_1984	PWY-5101	L-isoleucine biosynthesis II
Pden_1984	PWY-5103	L-isoleucine biosynthesis III
Pden_1984	PWY-5104	L-isoleucine biosynthesis IV
Pden_1984	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Pden_1985	PWY-7158	L-phenylalanine degradation V
Pden_1987	PWY-4381	fatty acid biosynthesis initiation I
Pden_1987	PWY-5743	3-hydroxypropanoate cycle
Pden_1987	PWY-5744	glyoxylate assimilation
Pden_1987	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Pden_1987	PWY-6679	jadomycin biosynthesis
Pden_1987	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Pden_1988	PWY-2161	folate polyglutamylation
Pden_1997	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Pden_1997	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
Pden_1999	PWY-5667	CDP-diacylglycerol biosynthesis I
Pden_1999	PWY-5981	CDP-diacylglycerol biosynthesis III
Pden_2020	PWY-2941	L-lysine biosynthesis II
Pden_2020	PWY-2942	L-lysine biosynthesis III
Pden_2020	PWY-5097	L-lysine biosynthesis VI
Pden_2022	PWY-4983	L-citrulline-nitric oxide cycle
Pden_2022	PWY-4984	urea cycle
Pden_2022	PWY-5	canavanine biosynthesis
Pden_2022	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Pden_2022	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Pden_2027	PWY-5676	acetyl-CoA fermentation to butanoate II
Pden_2027	PWY-5741	ethylmalonyl-CoA pathway
Pden_2027	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
Pden_2039	PWY-4981	L-proline biosynthesis II (from arginine)
Pden_2039	PWY-4984	urea cycle
Pden_2039	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Pden_2047	PWY-31	canavanine degradation
Pden_2047	PWY-4984	urea cycle
Pden_2047	PWY-6305	putrescine biosynthesis IV
Pden_2047	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
Pden_2103	PWY-5694	allantoin degradation to glyoxylate I
Pden_2103	PWY-5705	allantoin degradation to glyoxylate III
Pden_2109	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Pden_2119	PWY-3221	dTDP-L-rhamnose biosynthesis II
Pden_2119	PWY-6808	dTDP-D-forosamine biosynthesis
Pden_2119	PWY-6942	dTDP-D-desosamine biosynthesis
Pden_2119	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
Pden_2119	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
Pden_2119	PWY-6974	dTDP-L-olivose biosynthesis
Pden_2119	PWY-6976	dTDP-L-mycarose biosynthesis
Pden_2119	PWY-7104	dTDP-L-megosamine biosynthesis
Pden_2119	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
Pden_2119	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
Pden_2119	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
Pden_2119	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
Pden_2119	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
Pden_2119	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
Pden_2119	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
Pden_2119	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
Pden_2121	PWY-3221	dTDP-L-rhamnose biosynthesis II
Pden_2121	PWY-6808	dTDP-D-forosamine biosynthesis
Pden_2121	PWY-6942	dTDP-D-desosamine biosynthesis
Pden_2121	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
Pden_2121	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
Pden_2121	PWY-6974	dTDP-L-olivose biosynthesis
Pden_2121	PWY-6976	dTDP-L-mycarose biosynthesis
Pden_2121	PWY-7104	dTDP-L-megosamine biosynthesis
Pden_2121	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
Pden_2121	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
Pden_2121	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
Pden_2121	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
Pden_2121	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
Pden_2121	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
Pden_2121	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
Pden_2121	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
Pden_2132	PWY-5958	acridone alkaloid biosynthesis
Pden_2132	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
Pden_2132	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
Pden_2136	PWY-5958	acridone alkaloid biosynthesis
Pden_2136	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
Pden_2136	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
Pden_2141	PWY-6823	molybdenum cofactor biosynthesis
Pden_2143	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
Pden_2143	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
Pden_2144	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
Pden_2144	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Pden_2144	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
Pden_2144	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
Pden_2144	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
Pden_2144	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
Pden_2156	PWY-4261	glycerol degradation I
Pden_2162	PWY-4261	glycerol degradation I
Pden_2165	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Pden_2165	PWY-5686	UMP biosynthesis
Pden_2165	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Pden_2169	PWY-5101	L-isoleucine biosynthesis II
Pden_2169	PWY-5103	L-isoleucine biosynthesis III
Pden_2169	PWY-5104	L-isoleucine biosynthesis IV
Pden_2169	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
Pden_2169	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
Pden_2169	PWY-6389	(<i>S</i>)-acetoin biosynthesis
Pden_2169	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Pden_2170	PWY-5101	L-isoleucine biosynthesis II
Pden_2170	PWY-5103	L-isoleucine biosynthesis III
Pden_2170	PWY-5104	L-isoleucine biosynthesis IV
Pden_2170	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
Pden_2170	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
Pden_2170	PWY-6389	(<i>S</i>)-acetoin biosynthesis
Pden_2170	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Pden_2178	PWY-5743	3-hydroxypropanoate cycle
Pden_2178	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Pden_2178	PWY-6728	methylaspartate cycle
Pden_2178	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Pden_2187	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Pden_2187	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Pden_2189	PWY-7376	cob(II)yrinate <i>a,c</i>-diamide biosynthesis II (late cobalt incorporation)
Pden_2191	PWY-7376	cob(II)yrinate <i>a,c</i>-diamide biosynthesis II (late cobalt incorporation)
Pden_2198	PWY-3341	L-proline biosynthesis III
Pden_2198	PWY-4981	L-proline biosynthesis II (from arginine)
Pden_2198	PWY-6344	L-ornithine degradation II (Stickland reaction)
Pden_2200	PWY-5443	aminopropanol phosphate biosynthesis I
Pden_2202	PWY-6123	inosine-5'-phosphate biosynthesis I
Pden_2202	PWY-7234	inosine-5'-phosphate biosynthesis III
Pden_2207	PWY-5278	sulfite oxidation III
Pden_2207	PWY-5340	sulfate activation for sulfonation
Pden_2207	PWY-6683	sulfate reduction III (assimilatory)
Pden_2207	PWY-6932	selenate reduction
Pden_2219	PWY-7183	pyrimidine nucleobases salvage I
Pden_2221	PWY-7180	2'-deoxy-&alpha;-D-ribose 1-phosphate degradation
Pden_2222	PWY-7181	pyrimidine deoxyribonucleosides degradation
Pden_2223	PWY-6556	pyrimidine ribonucleosides salvage II
Pden_2223	PWY-7181	pyrimidine deoxyribonucleosides degradation
Pden_2223	PWY-7193	pyrimidine ribonucleosides salvage I
Pden_2223	PWY-7199	pyrimidine deoxyribonucleosides salvage
Pden_2224	PWY-1281	sulfoacetaldehyde degradation I
Pden_2224	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
Pden_2224	PWY-5482	pyruvate fermentation to acetate II
Pden_2224	PWY-5485	pyruvate fermentation to acetate IV
Pden_2224	PWY-5497	purine nucleobases degradation II (anaerobic)
Pden_2224	PWY-6637	sulfolactate degradation II
Pden_2224	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
Pden_2226	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Pden_2229	PWY-3961	phosphopantothenate biosynthesis II
Pden_2230	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
Pden_2230	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
Pden_2232	PWY-3781	aerobic respiration I (cytochrome c)
Pden_2232	PWY-4302	aerobic respiration III (alternative oxidase pathway)
Pden_2232	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
Pden_2232	PWY-6692	Fe(II) oxidation
Pden_2253	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
Pden_2254	PWY-6823	molybdenum cofactor biosynthesis
Pden_2276	PWY-1042	glycolysis IV (plant cytosol)
Pden_2276	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
Pden_2276	PWY-5484	glycolysis II (from fructose 6-phosphate)
Pden_2276	PWY-5723	Rubisco shunt
Pden_2276	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Pden_2276	PWY-6886	1-butanol autotrophic biosynthesis
Pden_2276	PWY-6901	superpathway of glucose and xylose degradation
Pden_2276	PWY-7003	glycerol degradation to butanol
Pden_2276	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
Pden_2276	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
Pden_2296	PWY-3821	galactose degradation III
Pden_2296	PWY-6317	galactose degradation I (Leloir pathway)
Pden_2296	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
Pden_2296	PWY-6527	stachyose degradation
Pden_2296	PWY-7328	superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
Pden_2296	PWY-7344	UDP-D-galactose biosynthesis
Pden_2299	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
Pden_2299	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
Pden_2305	PWY-3781	aerobic respiration I (cytochrome c)
Pden_2305	PWY-6692	Fe(II) oxidation
Pden_2305	PWY-7082	ammonia oxidation IV (autotrophic ammonia oxidizers)
Pden_2305	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Pden_2319	PWY-2201	folate transformations I
Pden_2319	PWY-3841	folate transformations II
Pden_2339	PWY-4381	fatty acid biosynthesis initiation I
Pden_2339	PWY-5743	3-hydroxypropanoate cycle
Pden_2339	PWY-5744	glyoxylate assimilation
Pden_2339	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Pden_2339	PWY-6679	jadomycin biosynthesis
Pden_2339	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Pden_2340	PWY-6823	molybdenum cofactor biosynthesis
Pden_2342	PWY-5269	cardiolipin biosynthesis II
Pden_2342	PWY-5668	cardiolipin biosynthesis I
Pden_2361	PWY-6420	pyrroloquinoline quinone biosynthesis
Pden_2375	PWY-6168	flavin biosynthesis III (fungi)
Pden_2375	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
Pden_2381	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
Pden_2381	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
Pden_2381	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
Pden_2382	PWY-5791	1,4-dihydroxy-2-naphthoate biosynthesis II (plants)
Pden_2382	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
Pden_2382	PWY-5901	2,3-dihydroxybenzoate biosynthesis
Pden_2382	PWY-6406	salicylate biosynthesis I
Pden_2383	PWY-5901	2,3-dihydroxybenzoate biosynthesis
Pden_2384	PWY-5901	2,3-dihydroxybenzoate biosynthesis
Pden_2406	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Pden_2406	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Pden_2407	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Pden_2407	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Pden_2429	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
Pden_2477	PWY-6906	chitin derivatives degradation
Pden_2477	PWY-7077	<i>N</i>-acetyl-D-galactosamine degradation
Pden_2477	PWY-7395	D-galactosamine and <i>N</i>-acetyl-D-galactosamine degradation
Pden_2483	PWY-3781	aerobic respiration I (cytochrome c)
Pden_2483	PWY-4521	arsenite oxidation I (respiratory)
Pden_2483	PWY-6692	Fe(II) oxidation
Pden_2483	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Pden_2488	PWY-5194	siroheme biosynthesis
Pden_2488	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
Pden_2499	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Pden_2499	PWY-5723	Rubisco shunt
Pden_2506	PWY-1042	glycolysis IV (plant cytosol)
Pden_2506	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
Pden_2506	PWY-5484	glycolysis II (from fructose 6-phosphate)
Pden_2506	PWY-5723	Rubisco shunt
Pden_2506	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Pden_2506	PWY-6886	1-butanol autotrophic biosynthesis
Pden_2506	PWY-6901	superpathway of glucose and xylose degradation
Pden_2506	PWY-7003	glycerol degradation to butanol
Pden_2506	PWY-7124	ethylene biosynthesis V (engineered)
Pden_2506	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
Pden_2527	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
Pden_2527	PWY-5523	5,6-dimethylbenzimidazole biosynthesis
Pden_2529	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
Pden_2529	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
Pden_2529	PWY-6268	adenosylcobalamin salvage from cobalamin
Pden_2529	PWY-6269	adenosylcobalamin salvage from cobinamide II
Pden_2533	PWY-6683	sulfate reduction III (assimilatory)
Pden_2535	PWY-5194	siroheme biosynthesis
Pden_2535	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
Pden_2540	PWY-5194	siroheme biosynthesis
Pden_2540	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
Pden_2542	PWY-7376	cob(II)yrinate <i>a,c</i>-diamide biosynthesis II (late cobalt incorporation)
Pden_2549	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
Pden_2549	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
Pden_2549	PWY-6268	adenosylcobalamin salvage from cobalamin
Pden_2549	PWY-6269	adenosylcobalamin salvage from cobinamide II
Pden_2552	PWY-1361	benzoyl-CoA degradation I (aerobic)
Pden_2552	PWY-5109	2-methylbutanoate biosynthesis
Pden_2552	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
Pden_2552	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
Pden_2552	PWY-5177	glutaryl-CoA degradation
Pden_2552	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Pden_2552	PWY-6435	4-hydroxybenzoate biosynthesis V
Pden_2552	PWY-6583	pyruvate fermentation to butanol I
Pden_2552	PWY-6863	pyruvate fermentation to hexanol
Pden_2552	PWY-6883	pyruvate fermentation to butanol II
Pden_2552	PWY-6944	androstenedione degradation
Pden_2552	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
Pden_2552	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
Pden_2552	PWY-7007	methyl ketone biosynthesis
Pden_2552	PWY-7046	4-coumarate degradation (anaerobic)
Pden_2552	PWY-7094	fatty acid salvage
Pden_2552	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
Pden_2552	PWY-735	jasmonic acid biosynthesis
Pden_2552	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
Pden_2554	PWY-5686	UMP biosynthesis
Pden_2555	PWY-5686	UMP biosynthesis
Pden_2556	PWY-5194	siroheme biosynthesis
Pden_2556	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
Pden_2572	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Pden_2572	PWY-5723	Rubisco shunt
Pden_2589	PWY-5855	ubiquinol-7 biosynthesis (prokaryotic)
Pden_2589	PWY-5856	ubiquinol-9 biosynthesis (prokaryotic)
Pden_2589	PWY-5857	ubiquinol-10 biosynthesis (prokaryotic)
Pden_2589	PWY-5870	ubiquinol-8 biosynthesis (eukaryotic)
Pden_2589	PWY-5871	ubiquinol-9 biosynthesis (eukaryotic)
Pden_2589	PWY-5872	ubiquinol-10 biosynthesis (eukaryotic)
Pden_2589	PWY-5873	ubiquinol-7 biosynthesis (eukaryotic)
Pden_2589	PWY-6708	ubiquinol-8 biosynthesis (prokaryotic)
Pden_2589	PWY-7230	ubiquinol-6 biosynthesis from 4-aminobenzoate (eukaryotic)
Pden_2589	PWY-7233	ubiquinol-6 bypass biosynthesis (eukaryotic)
Pden_2596	PWY-6502	oxidized GTP and dGTP detoxification
Pden_2597	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Pden_2602	PWY-5057	L-valine degradation II
Pden_2602	PWY-5076	L-leucine degradation III
Pden_2602	PWY-5078	L-isoleucine degradation II
Pden_2602	PWY-5101	L-isoleucine biosynthesis II
Pden_2602	PWY-5103	L-isoleucine biosynthesis III
Pden_2602	PWY-5104	L-isoleucine biosynthesis IV
Pden_2602	PWY-5108	L-isoleucine biosynthesis V
Pden_2613	PWY-2201	folate transformations I
Pden_2613	PWY-5497	purine nucleobases degradation II (anaerobic)
Pden_2614	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
Pden_2614	PWY-2201	folate transformations I
Pden_2614	PWY-3841	folate transformations II
Pden_2614	PWY-5030	L-histidine degradation III
Pden_2614	PWY-5497	purine nucleobases degradation II (anaerobic)
Pden_2614	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
Pden_2618	PWY-4261	glycerol degradation I
Pden_2620	PWY-5651	L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
Pden_2620	PWY-6309	L-tryptophan degradation XI (mammalian, via kynurenine)
Pden_2671	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
Pden_2680	PWY-2723	trehalose degradation V
Pden_2680	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
Pden_2680	PWY-5661	GDP-glucose biosynthesis
Pden_2680	PWY-7238	sucrose biosynthesis II
Pden_2680	PWY-7385	1,3-propanediol biosynthesis (engineered)
Pden_2682	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
Pden_2705	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
Pden_2705	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Pden_2705	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
Pden_2705	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
Pden_2707	PWY-5988	wound-induced proteolysis I
Pden_2707	PWY-6018	seed germination protein turnover
Pden_2718	PWY-6123	inosine-5'-phosphate biosynthesis I
Pden_2718	PWY-6124	inosine-5'-phosphate biosynthesis II
Pden_2718	PWY-7234	inosine-5'-phosphate biosynthesis III
Pden_2723	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
Pden_2731	PWY-5381	pyridine nucleotide cycling (plants)
Pden_2731	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
Pden_2731	PWY-6596	adenosine nucleotides degradation I
Pden_2731	PWY-6606	guanosine nucleotides degradation II
Pden_2731	PWY-6607	guanosine nucleotides degradation I
Pden_2731	PWY-6608	guanosine nucleotides degradation III
Pden_2731	PWY-7185	UTP and CTP dephosphorylation I
Pden_2748	PWY-7130	L-glucose degradation
Pden_2749	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
Pden_2749	PWY-6507	4-deoxy-L-<i>threo</i>-hex-4-enopyranuronate degradation
Pden_2749	PWY-7242	D-fructuronate degradation
Pden_2749	PWY-7310	D-glucosaminate degradation
Pden_2762	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
Pden_2775	PWY-2941	L-lysine biosynthesis II
Pden_2775	PWY-2942	L-lysine biosynthesis III
Pden_2775	PWY-5097	L-lysine biosynthesis VI
Pden_2775	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Pden_2775	PWY-6559	spermidine biosynthesis II
Pden_2775	PWY-6562	norspermidine biosynthesis
Pden_2775	PWY-7153	grixazone biosynthesis
Pden_2775	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Pden_2798	PWY-2941	L-lysine biosynthesis II
Pden_2798	PWY-2942	L-lysine biosynthesis III
Pden_2798	PWY-5097	L-lysine biosynthesis VI
Pden_2806	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
Pden_2813	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Pden_2817	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
Pden_2823	PWY-723	alkylnitronates degradation
