Pden_4530 PWY-6654 phosphopantothenate biosynthesis III Pden_4547 PWY-381 nitrate reduction II (assimilatory) Pden_4547 PWY-5675 nitrate reduction V (assimilatory) Pden_4547 PWY-6549 L-glutamine biosynthesis III Pden_4547 PWY-6963 ammonia assimilation cycle I Pden_4547 PWY-6964 ammonia assimilation cycle II Pden_4550 PWY-6672 cis-genanyl-CoA degradation Pden_4550 PWY-7118 chitin degradation to ethanol Pden_4564 PWY-6785 hydrogen production VIII Pden_4567 PWY-5747 2-methylcitrate cycle II Pden_4595 PWY-4261 glycerol degradation I Pden_4609 PWY-3561 choline biosynthesis III Pden_4609 PWY-7039 phosphatidate metabolism, as a signaling molecule Pden_4611 PWY-5506 methanol oxidation to formaldehyde IV Pden_4618 PWY-6386 UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing) Pden_4618 PWY-6387 UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing) Pden_4623 PWY-7533 gliotoxin biosynthesis Pden_4634 PWY-5988 wound-induced proteolysis I Pden_4634 PWY-6018 seed germination protein turnover Pden_4646 PWY-5651 L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde Pden_4646 PWY-6309 L-tryptophan degradation XI (mammalian, via kynurenine) Pden_4654 PWY-6348 phosphate acquisition Pden_4654 PWY-6357 phosphate utilization in cell wall regeneration Pden_4654 PWY-6907 thiamin diphosphate biosynthesis III (Staphylococcus) Pden_4654 PWY-6908 thiamin diphosphate biosynthesis IV (eukaryotes) Pden_4662 PWY-7204 pyridoxal 5'-phosphate salvage II (plants) Pden_4662 PWY-7282 4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast) Pden_4664 PWY-6163 chorismate biosynthesis from 3-dehydroquinate Pden_4679 PWY-6167 flavin biosynthesis II (archaea) Pden_4679 PWY-6168 flavin biosynthesis III (fungi) Pden_4691 PWY-5669 phosphatidylethanolamine biosynthesis I Pden_4692 PWY-5669 phosphatidylethanolamine biosynthesis I Pden_4709 PWY-7165 L-ascorbate biosynthesis VI (engineered pathway) Pden_4730 PWY-6967 methylamine degradation I Pden_4733 PWY-6967 methylamine degradation I Pden_4753 PWY-2941 L-lysine biosynthesis II Pden_4753 PWY-2942 L-lysine biosynthesis III Pden_4753 PWY-5097 L-lysine biosynthesis VI Pden_4757 PWY-5046 2-oxoisovalerate decarboxylation to isobutanoyl-CoA Pden_4760 PWY-5046 2-oxoisovalerate decarboxylation to isobutanoyl-CoA Pden_4760 PWY-5084 2-oxoglutarate decarboxylation to succinyl-CoA Pden_4774 PWY-7399 methylphosphonate degradation II Pden_4775 PWY-5532 adenosine nucleotides degradation IV Pden_4776 PWY-5532 adenosine nucleotides degradation IV Pden_4777 PWY-7399 methylphosphonate degradation II Pden_4779 PWY-7399 methylphosphonate degradation II Pden_4782 PWY-7399 methylphosphonate degradation II Pden_4791 PWY-1269 CMP-3-deoxy-D-manno-octulosonate biosynthesis I Pden_4791 PWY-5111 CMP-3-deoxy-D-manno-octulosonate biosynthesis II (from D-arabinose 5-phosphate) Pden_4791 PWY-6164 3-dehydroquinate biosynthesis I Pden_4792 PWY-1361 benzoyl-CoA degradation I (aerobic) Pden_4792 PWY-5109 2-methylbutanoate biosynthesis Pden_4792 PWY-5136 fatty acid β-oxidation II (peroxisome) Pden_4792 PWY-5138 unsaturated, even numbered fatty acid β-oxidation Pden_4792 PWY-5177 glutaryl-CoA degradation Pden_4792 PWY-5789 3-hydroxypropanoate/4-hydroxybutanate cycle Pden_4792 PWY-6435 4-hydroxybenzoate biosynthesis V Pden_4792 PWY-6583 pyruvate fermentation to butanol I Pden_4792 PWY-6863 pyruvate fermentation to hexanol Pden_4792 PWY-6883 pyruvate fermentation to butanol II Pden_4792 PWY-6944 androstenedione degradation Pden_4792 PWY-6945 cholesterol degradation to androstenedione I (cholesterol oxidase) Pden_4792 PWY-6946 cholesterol degradation to androstenedione II (cholesterol dehydrogenase) Pden_4792 PWY-7007 methyl ketone biosynthesis Pden_4792 PWY-7046 4-coumarate degradation (anaerobic) Pden_4792 PWY-7094 fatty acid salvage Pden_4792 PWY-7216 (R)- and (S)-3-hydroxybutanoate biosynthesis Pden_4792 PWY-735 jasmonic acid biosynthesis Pden_4792 PWY-7401 crotonate fermentation (to acetate and cyclohexane carboxylate) Pden_4801 PWY-1341 phenylacetate degradation II (anaerobic) Pden_4801 PWY-6318 L-phenylalanine degradation IV (mammalian, via side chain) Pden_4811 PWY-1361 benzoyl-CoA degradation I (aerobic) Pden_4811 PWY-2361 3-oxoadipate degradation Pden_4811 PWY-6185 4-methylcatechol degradation (ortho cleavage) Pden_4824 PWY-6749 CMP-legionaminate biosynthesis I Pden_4871 PWY-3341 L-proline biosynthesis III Pden_4871 PWY-4981 L-proline biosynthesis II (from arginine) Pden_4871 PWY-6344 L-ornithine degradation II (Stickland reaction) Pden_4872 PWY-6386 UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing) Pden_4872 PWY-6387 UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing) Pden_4904 PWY-2201 folate transformations I Pden_4904 PWY-5497 purine nucleobases degradation II (anaerobic) Pden_4905 PWY-1722 formate reduction to 5,10-methylenetetrahydrofolate Pden_4905 PWY-2201 folate transformations I Pden_4905 PWY-3841 folate transformations II Pden_4905 PWY-5030 L-histidine degradation III Pden_4905 PWY-5497 purine nucleobases degradation II (anaerobic) Pden_4905 PWY-6613 tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate Pden_4906 PWY-3661 glycine betaine degradation I Pden_4906 PWY-4722 creatinine degradation II Pden_4907 PWY-3661 glycine betaine degradation I Pden_4907 PWY-4722 creatinine degradation II Pden_4908 PWY-3661 glycine betaine degradation I Pden_4908 PWY-4722 creatinine degradation II Pden_4909 PWY-3661 glycine betaine degradation I Pden_4909 PWY-4722 creatinine degradation II Pden_4929 PWY-7130 L-glucose degradation Pden_4930 PWY-2221 Entner-Doudoroff pathway III (semi-phosphorylative) Pden_4930 PWY-6507 4-deoxy-L-threo-hex-4-enopyranuronate degradation Pden_4930 PWY-7242 D-fructuronate degradation Pden_4930 PWY-7310 D-glucosaminate degradation Pden_4966 PWY-5692 allantoin degradation to glyoxylate II Pden_4966 PWY-5698 allantoin degradation to ureidoglycolate II (ammonia producing) Pden_4968 PWY-7425 2-chloroacrylate degradation I Pden_4976 PWY-5154 L-arginine biosynthesis III (via N-acetyl-L-citrulline) Pden_4986 PWY-5083 NAD/NADH phosphorylation and dephosphorylation Pden_4986 PWY-7268 NAD/NADP-NADH/NADPH cytosolic interconversion (yeast) Pden_4986 PWY-7269 NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast) Pden_4996 PWY-5392 reductive TCA cycle II Pden_4996 PWY-5537 pyruvate fermentation to acetate V Pden_4996 PWY-5538 pyruvate fermentation to acetate VI Pden_4996 PWY-5690 TCA cycle II (plants and fungi) Pden_4996 PWY-5913 TCA cycle VI (obligate autotrophs) Pden_4996 PWY-6728 methylaspartate cycle Pden_4996 PWY-6969 TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase) Pden_4996 PWY-7384 anaerobic energy metabolism (invertebrates, mitochondrial) Pden_5022 PWY-1361 benzoyl-CoA degradation I (aerobic) Pden_5022 PWY-2361 3-oxoadipate degradation Pden_5022 PWY-6185 4-methylcatechol degradation (ortho cleavage) Pden_5043 PWY-6397 mycolyl-arabinogalactan-peptidoglycan complex biosynthesis Pden_5043 PWY-7328 superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis Pden_5054 PWY-5921 glutaminyl-tRNAgln biosynthesis via transamidation Pden_5061 PWY-7242 D-fructuronate degradation Pden_5073 PWY-1361 benzoyl-CoA degradation I (aerobic) Pden_5073 PWY-3602 L-carnitine degradation II Pden_5073 PWY-5109 2-methylbutanoate biosynthesis Pden_5073 PWY-5136 fatty acid β-oxidation II (peroxisome) Pden_5073 PWY-5138 unsaturated, even numbered fatty acid β-oxidation Pden_5073 PWY-5177 glutaryl-CoA degradation Pden_5073 PWY-5789 3-hydroxypropanoate/4-hydroxybutanate cycle Pden_5073 PWY-6435 4-hydroxybenzoate biosynthesis V Pden_5073 PWY-6583 pyruvate fermentation to butanol I Pden_5073 PWY-6863 pyruvate fermentation to hexanol Pden_5073 PWY-6883 pyruvate fermentation to butanol II Pden_5073 PWY-6944 androstenedione degradation Pden_5073 PWY-6945 cholesterol degradation to androstenedione I (cholesterol oxidase) Pden_5073 PWY-6946 cholesterol degradation to androstenedione II (cholesterol dehydrogenase) Pden_5073 PWY-7007 methyl ketone biosynthesis Pden_5073 PWY-7046 4-coumarate degradation (anaerobic) Pden_5073 PWY-7094 fatty acid salvage Pden_5073 PWY-7216 (R)- and (S)-3-hydroxybutanoate biosynthesis Pden_5073 PWY-735 jasmonic acid biosynthesis Pden_5073 PWY-7401 crotonate fermentation (to acetate and cyclohexane carboxylate) Pden_5073 PWY-7472 D-carnitine degradation II Pden_5086 PWY-1361 benzoyl-CoA degradation I (aerobic) Pden_5086 PWY-5109 2-methylbutanoate biosynthesis Pden_5086 PWY-5136 fatty acid β-oxidation II (peroxisome) Pden_5086 PWY-5138 unsaturated, even numbered fatty acid β-oxidation Pden_5086 PWY-5177 glutaryl-CoA degradation Pden_5086 PWY-5789 3-hydroxypropanoate/4-hydroxybutanate cycle Pden_5086 PWY-6435 4-hydroxybenzoate biosynthesis V Pden_5086 PWY-6583 pyruvate fermentation to butanol I Pden_5086 PWY-6863 pyruvate fermentation to hexanol Pden_5086 PWY-6883 pyruvate fermentation to butanol II Pden_5086 PWY-6944 androstenedione degradation Pden_5086 PWY-6945 cholesterol degradation to androstenedione I (cholesterol oxidase) Pden_5086 PWY-6946 cholesterol degradation to androstenedione II (cholesterol dehydrogenase) Pden_5086 PWY-7007 methyl ketone biosynthesis Pden_5086 PWY-7046 4-coumarate degradation (anaerobic) Pden_5086 PWY-7094 fatty acid salvage Pden_5086 PWY-7216 (R)- and (S)-3-hydroxybutanoate biosynthesis Pden_5086 PWY-735 jasmonic acid biosynthesis Pden_5086 PWY-7401 crotonate fermentation (to acetate and cyclohexane carboxylate) Pden_5107 PWY-3781 aerobic respiration I (cytochrome c) Pden_5107 PWY-4521 arsenite oxidation I (respiratory) Pden_5107 PWY-6692 Fe(II) oxidation Pden_5107 PWY-7279 aerobic respiration II (cytochrome c) (yeast) Pden_5107 PWY-7544 pyruvate to cytochrome bo oxidase electron transfer Pden_5116 PWY-40 putrescine biosynthesis I Pden_5116 PWY-6305 putrescine biosynthesis IV