Ppha_0012	PWY-5274	sulfide oxidation II (sulfide dehydrogenase)
Ppha_0041	PWY-5278	sulfite oxidation III
Ppha_0041	PWY-5340	sulfate activation for sulfonation
Ppha_0041	PWY-6683	sulfate reduction III (assimilatory)
Ppha_0041	PWY-6932	selenate reduction
Ppha_0048	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Ppha_0050	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
Ppha_0073	PWY-1341	phenylacetate degradation II (anaerobic)
Ppha_0073	PWY-6318	L-phenylalanine degradation IV (mammalian, via side chain)
Ppha_0080	PWY-7560	methylerythritol phosphate pathway II
Ppha_0082	PWY-5686	UMP biosynthesis
Ppha_0083	PWY-6749	CMP-legionaminate biosynthesis I
Ppha_0097	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
Ppha_0097	PWY-7177	UTP and CTP dephosphorylation II
Ppha_0097	PWY-7185	UTP and CTP dephosphorylation I
Ppha_0103	PWY-7158	L-phenylalanine degradation V
Ppha_0177	PWY-5526	bacteriochlorophyll <i>a</i> biosynthesis
Ppha_0177	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
Ppha_0177	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
Ppha_0197	PWY-5367	petroselinate biosynthesis
Ppha_0197	PWY-5971	palmitate biosynthesis II (bacteria and plants)
Ppha_0197	PWY-5973	<i>cis</i>-vaccenate biosynthesis
Ppha_0197	PWY-5989	stearate biosynthesis II (bacteria and plants)
Ppha_0197	PWY-5994	palmitate biosynthesis I (animals and fungi)
Ppha_0197	PWY-6113	superpathway of mycolate biosynthesis
Ppha_0197	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
Ppha_0197	PWY-6519	8-amino-7-oxononanoate biosynthesis I
Ppha_0197	PWY-6951	Ppha_0197|Ppha_0197|YP_002017151.1|GeneID:6461983
Ppha_0197	PWY-7053	docosahexaenoate biosynthesis I (lower eukaryotes)
Ppha_0197	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Ppha_0197	PWYG-321	mycolate biosynthesis
Ppha_0198	PWY-4381	fatty acid biosynthesis initiation I
Ppha_0198	PWY-6799	fatty acid biosynthesis (plant mitochondria)
Ppha_0198	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Ppha_0199	PWY-4381	fatty acid biosynthesis initiation I
Ppha_0204	PWY-6871	3-methylbutanol biosynthesis
Ppha_0212	PWY-3341	L-proline biosynthesis III
Ppha_0212	PWY-4981	L-proline biosynthesis II (from arginine)
Ppha_0212	PWY-6344	L-ornithine degradation II (Stickland reaction)
Ppha_0217	PWY-6832	2-aminoethylphosphonate degradation II
Ppha_0218	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Ppha_0218	PWY-5686	UMP biosynthesis
Ppha_0218	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Ppha_0274	PWY-6788	cellulose degradation II (fungi)
Ppha_0322	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Ppha_0324	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
Ppha_0324	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
Ppha_0325	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
Ppha_0325	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
Ppha_0326	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
Ppha_0326	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
Ppha_0330	PWY-622	starch biosynthesis
Ppha_0339	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
Ppha_0339	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
Ppha_0339	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Ppha_0339	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
Ppha_0339	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
Ppha_0339	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
Ppha_0339	PWY-7205	CMP phosphorylation
Ppha_0339	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
Ppha_0339	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Ppha_0339	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
Ppha_0339	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Ppha_0339	PWY-7224	purine deoxyribonucleosides salvage
Ppha_0339	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
Ppha_0339	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
Ppha_0345	PWY-6825	phosphatidylcholine biosynthesis V
Ppha_0365	PWY-6823	molybdenum cofactor biosynthesis
Ppha_0365	PWY-6891	thiazole biosynthesis II (Bacillus)
Ppha_0365	PWY-6892	thiazole biosynthesis I (E. coli)
Ppha_0365	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
Ppha_0404	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
Ppha_0406	PWY-5386	methylglyoxal degradation I
Ppha_0408	PWY-5155	&beta;-alanine biosynthesis III
Ppha_0414	PWY-5123	<i>trans, trans</i>-farnesyl diphosphate biosynthesis
Ppha_0414	PWY-6174	mevalonate pathway II (archaea)
Ppha_0414	PWY-6383	mono-<i>trans</i>, poly-<i>cis</i> decaprenyl phosphate biosynthesis
Ppha_0414	PWY-6859	<i>all-trans</i>-farnesol biosynthesis
Ppha_0414	PWY-7102	bisabolene biosynthesis
Ppha_0414	PWY-7391	isoprene biosynthesis II (engineered)
Ppha_0414	PWY-7524	mevalonate pathway III (archaea)
Ppha_0414	PWY-7560	methylerythritol phosphate pathway II
Ppha_0414	PWY-922	mevalonate pathway I
Ppha_0423	PWY-6749	CMP-legionaminate biosynthesis I
Ppha_0426	PWY-2161	folate polyglutamylation
Ppha_0427	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Ppha_0434	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
Ppha_0435	PWY-5392	reductive TCA cycle II
Ppha_0435	PWY-5537	pyruvate fermentation to acetate V
Ppha_0435	PWY-5538	pyruvate fermentation to acetate VI
Ppha_0435	PWY-5690	TCA cycle II (plants and fungi)
Ppha_0435	PWY-5913	TCA cycle VI (obligate autotrophs)
Ppha_0435	PWY-6728	methylaspartate cycle
Ppha_0435	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Ppha_0435	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Ppha_0442	PWY-6749	CMP-legionaminate biosynthesis I
Ppha_0448	PWY-7560	methylerythritol phosphate pathway II
Ppha_0449	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Ppha_0449	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Ppha_0451	PWY-7205	CMP phosphorylation
Ppha_0460	PWY-6605	adenine and adenosine salvage II
Ppha_0460	PWY-6610	adenine and adenosine salvage IV
Ppha_0464	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Ppha_0466	PWY-101	photosynthesis light reactions
Ppha_0466	PWY-6785	hydrogen production VIII
Ppha_0476	PWY-5381	pyridine nucleotide cycling (plants)
Ppha_0485	PWY-5839	menaquinol-7 biosynthesis
Ppha_0485	PWY-5844	menaquinol-9 biosynthesis
Ppha_0485	PWY-5849	menaquinol-6 biosynthesis
Ppha_0485	PWY-5890	menaquinol-10 biosynthesis
Ppha_0485	PWY-5891	menaquinol-11 biosynthesis
Ppha_0485	PWY-5892	menaquinol-12 biosynthesis
Ppha_0485	PWY-5895	menaquinol-13 biosynthesis
Ppha_0493	PWY-101	photosynthesis light reactions
Ppha_0493	PWY-7230	ubiquinol-6 biosynthesis from 4-aminobenzoate (eukaryotic)
Ppha_0502	PWY-5958	acridone alkaloid biosynthesis
Ppha_0502	PWY-6543	4-aminobenzoate biosynthesis
Ppha_0502	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
Ppha_0502	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
Ppha_0502	PWY-6722	candicidin biosynthesis
Ppha_0510	PWY-6614	tetrahydrofolate biosynthesis
Ppha_0527	PWY-6749	CMP-legionaminate biosynthesis I
Ppha_0527	PWY-7131	CMP-legionaminate biosynthesis II
Ppha_0534	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
Ppha_0534	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
Ppha_0558	PWY-3821	galactose degradation III
Ppha_0558	PWY-6317	galactose degradation I (Leloir pathway)
Ppha_0558	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
Ppha_0558	PWY-6527	stachyose degradation
Ppha_0558	PWY-7328	superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
Ppha_0558	PWY-7344	UDP-D-galactose biosynthesis
Ppha_0559	PWY-3801	sucrose degradation II (sucrose synthase)
Ppha_0559	PWY-5054	sorbitol biosynthesis I
Ppha_0559	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
Ppha_0559	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
Ppha_0559	PWY-5659	GDP-mannose biosynthesis
Ppha_0559	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Ppha_0559	PWY-621	sucrose degradation III (sucrose invertase)
Ppha_0559	PWY-622	starch biosynthesis
Ppha_0559	PWY-6531	mannitol cycle
Ppha_0559	PWY-6981	chitin biosynthesis
Ppha_0559	PWY-7238	sucrose biosynthesis II
Ppha_0559	PWY-7347	sucrose biosynthesis III
Ppha_0559	PWY-7385	1,3-propanediol biosynthesis (engineered)
Ppha_0560	PWY-7335	UDP-<i>N</i>-acetyl-&alpha;-D-mannosaminouronate biosynthesis
Ppha_0570	PWY-66	GDP-L-fucose biosynthesis I (from GDP-D-mannose)
Ppha_0571	PWY-5738	GDP-6-deoxy-D-talose biosynthesis
Ppha_0571	PWY-5739	GDP-D-perosamine biosynthesis
Ppha_0571	PWY-5740	GDP-L-colitose biosynthesis
Ppha_0571	PWY-66	GDP-L-fucose biosynthesis I (from GDP-D-mannose)
Ppha_0589	PWY-5738	GDP-6-deoxy-D-talose biosynthesis
Ppha_0589	PWY-5739	GDP-D-perosamine biosynthesis
Ppha_0589	PWY-5740	GDP-L-colitose biosynthesis
Ppha_0589	PWY-66	GDP-L-fucose biosynthesis I (from GDP-D-mannose)
Ppha_0629	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
Ppha_0629	PWY-6549	L-glutamine biosynthesis III
Ppha_0629	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
Ppha_0629	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
Ppha_0647	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Ppha_0647	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
Ppha_0647	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
Ppha_0649	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Ppha_0649	PWY-5686	UMP biosynthesis
Ppha_0649	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Ppha_0651	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Ppha_0651	PWY-5723	Rubisco shunt
Ppha_0656	PWY-7432	L-phenylalanine biosynthesis III (cytosolic, plants)
Ppha_0659	PWY-5269	cardiolipin biosynthesis II
Ppha_0659	PWY-5668	cardiolipin biosynthesis I
Ppha_0660	PWY-5971	palmitate biosynthesis II (bacteria and plants)
Ppha_0660	PWY-5973	<i>cis</i>-vaccenate biosynthesis
Ppha_0660	PWY-5989	stearate biosynthesis II (bacteria and plants)
Ppha_0660	PWY-5994	palmitate biosynthesis I (animals and fungi)
Ppha_0660	PWY-6113	superpathway of mycolate biosynthesis
Ppha_0660	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
Ppha_0660	PWY-6519	8-amino-7-oxononanoate biosynthesis I
Ppha_0660	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Ppha_0660	PWYG-321	mycolate biosynthesis
Ppha_0661	PWY-2301	<i>myo</i>-inositol biosynthesis
Ppha_0661	PWY-4702	phytate degradation I
Ppha_0661	PWY-6363	D-<i>myo</i>-inositol (1,4,5)-trisphosphate degradation
Ppha_0664	PWY-6672	<i>cis</i>-genanyl-CoA degradation
Ppha_0664	PWY-7118	chitin degradation to ethanol
Ppha_0683	PWY-1622	formaldehyde assimilation I (serine pathway)
Ppha_0683	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
Ppha_0683	PWY-5913	TCA cycle VI (obligate autotrophs)
Ppha_0683	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Ppha_0683	PWY-6146	<i>Methanobacterium thermoautotrophicum</i> biosynthetic metabolism
Ppha_0683	PWY-6549	L-glutamine biosynthesis III
Ppha_0683	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
Ppha_0683	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
Ppha_0683	PWY-7124	ethylene biosynthesis V (engineered)
Ppha_0685	PWY-6700	queuosine biosynthesis
Ppha_0699	PWY-2941	L-lysine biosynthesis II
Ppha_0699	PWY-2942	L-lysine biosynthesis III
Ppha_0699	PWY-5097	L-lysine biosynthesis VI
Ppha_0703	PWY-5669	phosphatidylethanolamine biosynthesis I
Ppha_0716	PWY-5057	L-valine degradation II
Ppha_0716	PWY-5076	L-leucine degradation III
Ppha_0716	PWY-5078	L-isoleucine degradation II
Ppha_0716	PWY-5101	L-isoleucine biosynthesis II
Ppha_0716	PWY-5103	L-isoleucine biosynthesis III
Ppha_0716	PWY-5104	L-isoleucine biosynthesis IV
Ppha_0716	PWY-5108	L-isoleucine biosynthesis V
Ppha_0717	PWY-1042	glycolysis IV (plant cytosol)
Ppha_0717	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Ppha_0717	PWY-5484	glycolysis II (from fructose 6-phosphate)
Ppha_0717	PWY-7385	1,3-propanediol biosynthesis (engineered)
Ppha_0719	PWY-7560	methylerythritol phosphate pathway II
Ppha_0722	PWY-5941	glycogen degradation II (eukaryotic)
Ppha_0722	PWY-622	starch biosynthesis
Ppha_0722	PWY-6731	starch degradation III
Ppha_0722	PWY-6737	starch degradation V
Ppha_0722	PWY-7238	sucrose biosynthesis II
Ppha_0725	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Ppha_0725	PWY-5686	UMP biosynthesis
Ppha_0725	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Ppha_0726	PWY-6167	flavin biosynthesis II (archaea)
Ppha_0726	PWY-6168	flavin biosynthesis III (fungi)
Ppha_0726	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
Ppha_0727	PWY-1622	formaldehyde assimilation I (serine pathway)
Ppha_0727	PWY-181	photorespiration
Ppha_0727	PWY-2161	folate polyglutamylation
Ppha_0727	PWY-2201	folate transformations I
Ppha_0727	PWY-3661	glycine betaine degradation I
Ppha_0727	PWY-3661-1	glycine betaine degradation II (mammalian)
Ppha_0727	PWY-3841	folate transformations II
Ppha_0727	PWY-5497	purine nucleobases degradation II (anaerobic)
Ppha_0739	PWY-6123	inosine-5'-phosphate biosynthesis I
Ppha_0739	PWY-7234	inosine-5'-phosphate biosynthesis III
Ppha_0776	PWY-5392	reductive TCA cycle II
Ppha_0776	PWY-5537	pyruvate fermentation to acetate V
Ppha_0776	PWY-5538	pyruvate fermentation to acetate VI
Ppha_0776	PWY-5690	TCA cycle II (plants and fungi)
Ppha_0776	PWY-5913	TCA cycle VI (obligate autotrophs)
Ppha_0776	PWY-6728	methylaspartate cycle
Ppha_0776	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Ppha_0776	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Ppha_0779	PWY-723	alkylnitronates degradation
Ppha_0780	PWY-1622	formaldehyde assimilation I (serine pathway)
Ppha_0780	PWY-5484	glycolysis II (from fructose 6-phosphate)
Ppha_0810	PWY-5274	sulfide oxidation II (sulfide dehydrogenase)
Ppha_0838	PWY-6703	preQ<sub>0</sub> biosynthesis
Ppha_0850	PWY-6700	queuosine biosynthesis
Ppha_0851	PWY-5747	2-methylcitrate cycle II
Ppha_0854	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Ppha_0854	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Ppha_0858	PWY-5316	nicotine biosynthesis
Ppha_0858	PWY-7342	superpathway of nicotine biosynthesis
Ppha_0860	PWY-40	putrescine biosynthesis I
Ppha_0860	PWY-43	putrescine biosynthesis II
Ppha_0860	PWY-6305	putrescine biosynthesis IV
Ppha_0860	PWY-6834	spermidine biosynthesis III
Ppha_0863	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Ppha_0863	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Ppha_0868	PWY-5316	nicotine biosynthesis
Ppha_0868	PWY-7342	superpathway of nicotine biosynthesis
Ppha_0871	PWY-4381	fatty acid biosynthesis initiation I
Ppha_0876	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
Ppha_0876	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Ppha_0876	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
Ppha_0876	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
Ppha_0876	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Ppha_0876	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Ppha_0876	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
Ppha_0876	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
Ppha_0880	PWY-40	putrescine biosynthesis I
Ppha_0880	PWY-43	putrescine biosynthesis II
Ppha_0880	PWY-6305	putrescine biosynthesis IV
Ppha_0880	PWY-6834	spermidine biosynthesis III
Ppha_0917	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
Ppha_0917	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
Ppha_0921	PWY-6936	seleno-amino acid biosynthesis
Ppha_0929	PWY-5344	L-homocysteine biosynthesis
Ppha_0929	PWY-7174	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation II
Ppha_0930	PWY-5344	L-homocysteine biosynthesis
Ppha_0931	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
Ppha_0941	PWY-6936	seleno-amino acid biosynthesis
Ppha_0941	PWY-7274	D-cycloserine biosynthesis
Ppha_0942	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Ppha_0943	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Ppha_0943	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
Ppha_0944	PWY-6339	syringate degradation
Ppha_0946	PWY-6339	syringate degradation
Ppha_0947	PWY-4381	fatty acid biosynthesis initiation I
Ppha_0947	PWY-5743	3-hydroxypropanoate cycle
Ppha_0947	PWY-5744	glyoxylate assimilation
Ppha_0947	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Ppha_0947	PWY-6679	jadomycin biosynthesis
Ppha_0947	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Ppha_0949	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Ppha_0949	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
Ppha_0950	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Ppha_0950	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
Ppha_0951	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Ppha_0979	PWY-5526	bacteriochlorophyll <i>a</i> biosynthesis
Ppha_1012	PWY-6936	seleno-amino acid biosynthesis
Ppha_1012	PWY-7274	D-cycloserine biosynthesis
Ppha_1024	PWY-101	photosynthesis light reactions
Ppha_1024	PWY-7230	ubiquinol-6 biosynthesis from 4-aminobenzoate (eukaryotic)
Ppha_1025	PWY-5839	menaquinol-7 biosynthesis
Ppha_1025	PWY-5851	demethylmenaquinol-9 biosynthesis
Ppha_1025	PWY-5852	demethylmenaquinol-8 biosynthesis I
Ppha_1025	PWY-5853	demethylmenaquinol-6 biosynthesis I
Ppha_1025	PWY-5890	menaquinol-10 biosynthesis
Ppha_1025	PWY-5891	menaquinol-11 biosynthesis
Ppha_1025	PWY-5892	menaquinol-12 biosynthesis
Ppha_1025	PWY-5895	menaquinol-13 biosynthesis
Ppha_1028	PWY-43	putrescine biosynthesis II
Ppha_1029	PWY-1622	formaldehyde assimilation I (serine pathway)
Ppha_1029	PWY-5392	reductive TCA cycle II
Ppha_1029	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
Ppha_1029	PWY-5690	TCA cycle II (plants and fungi)
Ppha_1029	PWY-5913	TCA cycle VI (obligate autotrophs)
Ppha_1029	PWY-6728	methylaspartate cycle
Ppha_1029	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Ppha_1029	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
Ppha_1029	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
Ppha_1046	PWY-6349	CDP-archaeol biosynthesis
Ppha_1063	PWY-7560	methylerythritol phosphate pathway II
Ppha_1091	PWY-1042	glycolysis IV (plant cytosol)
Ppha_1091	PWY-5484	glycolysis II (from fructose 6-phosphate)
Ppha_1091	PWY-6901	superpathway of glucose and xylose degradation
Ppha_1091	PWY-7003	glycerol degradation to butanol
Ppha_1167	PWY-5743	3-hydroxypropanoate cycle
Ppha_1167	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Ppha_1167	PWY-6728	methylaspartate cycle
Ppha_1167	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Ppha_1168	PWY-5743	3-hydroxypropanoate cycle
Ppha_1168	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Ppha_1168	PWY-6728	methylaspartate cycle
Ppha_1168	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Ppha_1169	PWY-4381	fatty acid biosynthesis initiation I
Ppha_1169	PWY-5743	3-hydroxypropanoate cycle
Ppha_1169	PWY-5744	glyoxylate assimilation
Ppha_1169	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Ppha_1169	PWY-6679	jadomycin biosynthesis
Ppha_1169	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Ppha_1170	PWY-5743	3-hydroxypropanoate cycle
Ppha_1170	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Ppha_1170	PWY-6728	methylaspartate cycle
Ppha_1170	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Ppha_1188	PWY-6123	inosine-5'-phosphate biosynthesis I
Ppha_1188	PWY-6124	inosine-5'-phosphate biosynthesis II
Ppha_1188	PWY-7234	inosine-5'-phosphate biosynthesis III
Ppha_1190	PWY-6891	thiazole biosynthesis II (Bacillus)
Ppha_1190	PWY-6892	thiazole biosynthesis I (E. coli)
Ppha_1190	PWY-7560	methylerythritol phosphate pathway II
Ppha_1201	PWY-2781	<i>cis</i>-zeatin biosynthesis
Ppha_1205	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
Ppha_1205	PWY-2201	folate transformations I
Ppha_1205	PWY-3841	folate transformations II
Ppha_1205	PWY-5030	L-histidine degradation III
Ppha_1205	PWY-5497	purine nucleobases degradation II (anaerobic)
Ppha_1205	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
Ppha_1210	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Ppha_1210	PWY-6416	quinate degradation II
Ppha_1210	PWY-6707	gallate biosynthesis
Ppha_1212	PWY-6123	inosine-5'-phosphate biosynthesis I
Ppha_1212	PWY-6124	inosine-5'-phosphate biosynthesis II
Ppha_1212	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Ppha_1212	PWY-7234	inosine-5'-phosphate biosynthesis III
Ppha_1263	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
Ppha_1263	PWY-5523	5,6-dimethylbenzimidazole biosynthesis
Ppha_1265	PWY-5443	aminopropanol phosphate biosynthesis I
Ppha_1267	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
Ppha_1267	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
Ppha_1267	PWY-6268	adenosylcobalamin salvage from cobalamin
Ppha_1267	PWY-6269	adenosylcobalamin salvage from cobinamide II
Ppha_1293	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
Ppha_1293	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
Ppha_1293	PWY-6269	adenosylcobalamin salvage from cobinamide II
Ppha_1294	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
Ppha_1294	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
Ppha_1294	PWY-6269	adenosylcobalamin salvage from cobinamide II
Ppha_1295	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
Ppha_1295	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
Ppha_1295	PWY-6269	adenosylcobalamin salvage from cobinamide II
Ppha_1301	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Ppha_1301	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Ppha_1309	PWY-6938	NADH repair
Ppha_1310	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Ppha_1310	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
Ppha_1310	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
Ppha_1316	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
Ppha_1316	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
Ppha_1316	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
Ppha_1330	PWY-6823	molybdenum cofactor biosynthesis
Ppha_1339	PWY-6823	molybdenum cofactor biosynthesis
Ppha_1356	PWY-5686	UMP biosynthesis
Ppha_1362	PWY-1042	glycolysis IV (plant cytosol)
Ppha_1362	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Ppha_1362	PWY-5484	glycolysis II (from fructose 6-phosphate)
Ppha_1362	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Ppha_1362	PWY-7385	1,3-propanediol biosynthesis (engineered)
Ppha_1367	PWY-4983	L-citrulline-nitric oxide cycle
Ppha_1367	PWY-4984	urea cycle
Ppha_1367	PWY-5	canavanine biosynthesis
Ppha_1367	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Ppha_1367	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Ppha_1378	PWY-4983	L-citrulline-nitric oxide cycle
Ppha_1378	PWY-4984	urea cycle
Ppha_1378	PWY-5	canavanine biosynthesis
Ppha_1378	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Ppha_1378	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Ppha_1380	PWY-4981	L-proline biosynthesis II (from arginine)
Ppha_1380	PWY-4984	urea cycle
Ppha_1380	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Ppha_1381	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Ppha_1381	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Ppha_1382	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Ppha_1383	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Ppha_1383	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Ppha_1392	PWY-5392	reductive TCA cycle II
Ppha_1392	PWY-5537	pyruvate fermentation to acetate V
Ppha_1392	PWY-5538	pyruvate fermentation to acetate VI
Ppha_1392	PWY-5690	TCA cycle II (plants and fungi)
Ppha_1392	PWY-5913	TCA cycle VI (obligate autotrophs)
Ppha_1392	PWY-6728	methylaspartate cycle
Ppha_1392	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Ppha_1392	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Ppha_1393	PWY-5392	reductive TCA cycle II
Ppha_1393	PWY-5537	pyruvate fermentation to acetate V
Ppha_1393	PWY-5538	pyruvate fermentation to acetate VI
Ppha_1393	PWY-5690	TCA cycle II (plants and fungi)
Ppha_1393	PWY-5913	TCA cycle VI (obligate autotrophs)
Ppha_1393	PWY-6728	methylaspartate cycle
Ppha_1393	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Ppha_1393	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Ppha_1461	PWY-1042	glycolysis IV (plant cytosol)
Ppha_1461	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Ppha_1461	PWY-5484	glycolysis II (from fructose 6-phosphate)
Ppha_1461	PWY-7385	1,3-propanediol biosynthesis (engineered)
Ppha_1484	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
Ppha_1484	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
Ppha_1490	PWY-6829	tRNA methylation (yeast)
Ppha_1490	PWY-7285	methylwyosine biosynthesis
Ppha_1490	PWY-7286	7-(3-amino-3-carboxypropyl)-wyosine biosynthesis
Ppha_1499	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
Ppha_1499	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
Ppha_1499	PWY-6897	thiamin salvage II
Ppha_1499	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
Ppha_1499	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
Ppha_1499	PWY-7353	4-methyl-5(&beta;-hydroxyethyl)thiazole salvage (yeast)
Ppha_1499	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
Ppha_1500	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
Ppha_1500	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
Ppha_1500	PWY-6897	thiamin salvage II
Ppha_1500	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
Ppha_1500	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
Ppha_1500	PWY-7353	4-methyl-5(&beta;-hydroxyethyl)thiazole salvage (yeast)
Ppha_1500	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
Ppha_1501	PWY-6910	hydroxymethylpyrimidine salvage
Ppha_1501	PWY-7356	thiamin salvage IV (yeast)
Ppha_1501	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
Ppha_1502	PWY-7346	UDP-&alpha;-D-glucuronate biosynthesis (from UDP-glucose)
Ppha_1505	PWY-5988	wound-induced proteolysis I
Ppha_1505	PWY-6018	seed germination protein turnover
Ppha_1510	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Ppha_1515	PWY-3801	sucrose degradation II (sucrose synthase)
Ppha_1515	PWY-5054	sorbitol biosynthesis I
Ppha_1515	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
Ppha_1515	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
Ppha_1515	PWY-5659	GDP-mannose biosynthesis
Ppha_1515	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Ppha_1515	PWY-621	sucrose degradation III (sucrose invertase)
Ppha_1515	PWY-622	starch biosynthesis
Ppha_1515	PWY-6531	mannitol cycle
Ppha_1515	PWY-6981	chitin biosynthesis
Ppha_1515	PWY-7238	sucrose biosynthesis II
Ppha_1515	PWY-7347	sucrose biosynthesis III
Ppha_1515	PWY-7385	1,3-propanediol biosynthesis (engineered)
Ppha_1519	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
Ppha_1519	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
Ppha_1519	PWY-6164	3-dehydroquinate biosynthesis I
Ppha_1539	PWY-6854	ethylene biosynthesis III (microbes)
Ppha_1569	PWY-5392	reductive TCA cycle II
Ppha_1569	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
Ppha_1569	PWY-5690	TCA cycle II (plants and fungi)
Ppha_1569	PWY-5913	TCA cycle VI (obligate autotrophs)
Ppha_1569	PWY-6728	methylaspartate cycle
Ppha_1569	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Ppha_1569	PWY-7254	TCA cycle VII (acetate-producers)
Ppha_1569	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Ppha_1575	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
Ppha_1575	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
Ppha_1611	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
Ppha_1611	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Ppha_1611	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
Ppha_1611	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
Ppha_1611	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
Ppha_1611	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
Ppha_1614	PWY-6700	queuosine biosynthesis
Ppha_1615	PWY-7560	methylerythritol phosphate pathway II
Ppha_1625	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Ppha_1625	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
Ppha_1625	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
Ppha_1626	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Ppha_1626	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
Ppha_1626	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
Ppha_1627	PWY-5669	phosphatidylethanolamine biosynthesis I
Ppha_1628	PWY-6654	phosphopantothenate biosynthesis III
Ppha_1629	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
Ppha_1629	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
Ppha_1631	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Ppha_1631	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Ppha_1647	PWY-2201	folate transformations I
Ppha_1647	PWY-3841	folate transformations II
Ppha_1648	PWY-2941	L-lysine biosynthesis II
Ppha_1648	PWY-2942	L-lysine biosynthesis III
Ppha_1648	PWY-5097	L-lysine biosynthesis VI
Ppha_1652	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Ppha_1652	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Ppha_1685	PWY-5491	diethylphosphate degradation
Ppha_1695	PWY-40	putrescine biosynthesis I
Ppha_1695	PWY-43	putrescine biosynthesis II
Ppha_1695	PWY-6305	putrescine biosynthesis IV
Ppha_1695	PWY-6834	spermidine biosynthesis III
Ppha_1700	PWY-5491	diethylphosphate degradation
Ppha_1747	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Ppha_1756	PWY-6700	queuosine biosynthesis
Ppha_1763	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Ppha_1764	PWY-6164	3-dehydroquinate biosynthesis I
Ppha_1765	PWY-3961	phosphopantothenate biosynthesis II
Ppha_1767	PWY-381	nitrate reduction II (assimilatory)
Ppha_1767	PWY-5675	nitrate reduction V (assimilatory)
Ppha_1767	PWY-6549	L-glutamine biosynthesis III
Ppha_1767	PWY-6963	ammonia assimilation cycle I
Ppha_1767	PWY-6964	ammonia assimilation cycle II
Ppha_1773	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
Ppha_1773	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Ppha_1773	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
Ppha_1773	PWY-7206	pyrimidine deoxyribonucleotides dephosphorylation
Ppha_1778	PWY-6890	4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis
Ppha_1779	PWY-1042	glycolysis IV (plant cytosol)
Ppha_1779	PWY-5484	glycolysis II (from fructose 6-phosphate)
Ppha_1779	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Ppha_1779	PWY-7003	glycerol degradation to butanol
Ppha_1783	PWY-5958	acridone alkaloid biosynthesis
Ppha_1783	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
Ppha_1783	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
Ppha_1790	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
Ppha_1790	PWY-6596	adenosine nucleotides degradation I
Ppha_1790	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
Ppha_1794	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
Ppha_1794	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
Ppha_1795	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
Ppha_1795	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
Ppha_1796	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
Ppha_1796	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
Ppha_1797	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
Ppha_1797	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
Ppha_1832	PWY-6840	homoglutathione biosynthesis
Ppha_1832	PWY-7255	ergothioneine biosynthesis I (bacteria)
Ppha_1858	PWY-5663	tetrahydrobiopterin biosynthesis I
Ppha_1858	PWY-5664	tetrahydrobiopterin biosynthesis II
Ppha_1858	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
Ppha_1858	PWY-6703	preQ<sub>0</sub> biosynthesis
Ppha_1858	PWY-6983	tetrahydrobiopterin biosynthesis III
Ppha_1858	PWY-7442	drosopterin and aurodrosopterin biosynthesis
Ppha_1886	PWY-6167	flavin biosynthesis II (archaea)
Ppha_1886	PWY-6168	flavin biosynthesis III (fungi)
Ppha_1886	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Ppha_1891	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
Ppha_1915	PWY-5482	pyruvate fermentation to acetate II
Ppha_1915	PWY-5485	pyruvate fermentation to acetate IV
Ppha_1915	PWY-5497	purine nucleobases degradation II (anaerobic)
Ppha_1919	PWY-3081	L-lysine biosynthesis V
Ppha_1919	PWY-6871	3-methylbutanol biosynthesis
Ppha_1956	PWY-6823	molybdenum cofactor biosynthesis
Ppha_1963	PWY-5674	nitrate reduction IV (dissimilatory)
Ppha_2000	PWY-6936	seleno-amino acid biosynthesis
Ppha_2003	PWY-6891	thiazole biosynthesis II (Bacillus)
Ppha_2003	PWY-6892	thiazole biosynthesis I (E. coli)
Ppha_2004	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
Ppha_2010	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
Ppha_2011	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
Ppha_2012	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
Ppha_2012	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
Ppha_2018	PWY-6454	vancomycin resistance I
Ppha_2018	PWY-6455	vancomycin resistance II
Ppha_2055	PWY-5686	UMP biosynthesis
Ppha_2066	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Ppha_2071	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
Ppha_2072	PWY-4202	arsenate detoxification I (glutaredoxin)
Ppha_2072	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
Ppha_2072	PWY-6608	guanosine nucleotides degradation III
Ppha_2072	PWY-6609	adenine and adenosine salvage III
Ppha_2072	PWY-6611	adenine and adenosine salvage V
Ppha_2072	PWY-6620	guanine and guanosine salvage
Ppha_2072	PWY-6627	salinosporamide A biosynthesis
Ppha_2072	PWY-6644	fluoroacetate and fluorothreonine biosynthesis
Ppha_2072	PWY-7179	purine deoxyribonucleosides degradation I
Ppha_2072	PWY-7179-1	purine deoxyribonucleosides degradation
Ppha_2073	PWY-4361	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation
Ppha_2073	PWY-7174	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation II
Ppha_2074	PWY-3781	aerobic respiration I (cytochrome c)
Ppha_2074	PWY-4521	arsenite oxidation I (respiratory)
Ppha_2074	PWY-6692	Fe(II) oxidation
Ppha_2074	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Ppha_2075	PWY-3781	aerobic respiration I (cytochrome c)
Ppha_2075	PWY-4521	arsenite oxidation I (respiratory)
Ppha_2075	PWY-6692	Fe(II) oxidation
Ppha_2075	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Ppha_2094	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
Ppha_2094	PWY-5912	2'-deoxymugineic acid phytosiderophore biosynthesis
Ppha_2095	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
Ppha_2167	PWY-5101	L-isoleucine biosynthesis II
Ppha_2167	PWY-5103	L-isoleucine biosynthesis III
Ppha_2167	PWY-5104	L-isoleucine biosynthesis IV
Ppha_2167	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Ppha_2168	PWY-5101	L-isoleucine biosynthesis II
Ppha_2168	PWY-5103	L-isoleucine biosynthesis III
Ppha_2168	PWY-5104	L-isoleucine biosynthesis IV
Ppha_2168	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
Ppha_2168	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
Ppha_2168	PWY-6389	(<i>S</i>)-acetoin biosynthesis
Ppha_2168	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Ppha_2171	PWY-5101	L-isoleucine biosynthesis II
Ppha_2171	PWY-5103	L-isoleucine biosynthesis III
Ppha_2171	PWY-5104	L-isoleucine biosynthesis IV
Ppha_2171	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
Ppha_2171	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
Ppha_2171	PWY-6389	(<i>S</i>)-acetoin biosynthesis
Ppha_2171	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Ppha_2172	PWY-5101	L-isoleucine biosynthesis II
Ppha_2172	PWY-5103	L-isoleucine biosynthesis III
Ppha_2172	PWY-5104	L-isoleucine biosynthesis IV
Ppha_2172	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Ppha_2173	PWY-7396	butanol and isobutanol biosynthesis (engineered)
Ppha_2174	PWY-6871	3-methylbutanol biosynthesis
Ppha_2177	PWY-5101	L-isoleucine biosynthesis II
Ppha_2177	PWY-6871	3-methylbutanol biosynthesis
Ppha_2199	PWY-2201	folate transformations I
Ppha_2199	PWY-5497	purine nucleobases degradation II (anaerobic)
Ppha_2207	PWY-5484	glycolysis II (from fructose 6-phosphate)
Ppha_2213	PWY-5913	TCA cycle VI (obligate autotrophs)
Ppha_2213	PWY-6549	L-glutamine biosynthesis III
Ppha_2213	PWY-6728	methylaspartate cycle
Ppha_2213	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Ppha_2213	PWY-7124	ethylene biosynthesis V (engineered)
Ppha_2213	PWY-7254	TCA cycle VII (acetate-producers)
Ppha_2213	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
Ppha_2214	PWY-5971	palmitate biosynthesis II (bacteria and plants)
Ppha_2214	PWY-5973	<i>cis</i>-vaccenate biosynthesis
Ppha_2214	PWY-5989	stearate biosynthesis II (bacteria and plants)
Ppha_2214	PWY-6113	superpathway of mycolate biosynthesis
Ppha_2214	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
Ppha_2214	PWY-6519	8-amino-7-oxononanoate biosynthesis I
Ppha_2214	PWY-7096	triclosan resistance
Ppha_2214	PWYG-321	mycolate biosynthesis
Ppha_2222	PWY-6891	thiazole biosynthesis II (Bacillus)
Ppha_2222	PWY-6892	thiazole biosynthesis I (E. coli)
Ppha_2222	PWY-7560	methylerythritol phosphate pathway II
Ppha_2223	PWY-5269	cardiolipin biosynthesis II
Ppha_2223	PWY-5668	cardiolipin biosynthesis I
Ppha_2224	PWY-5269	cardiolipin biosynthesis II
Ppha_2224	PWY-5668	cardiolipin biosynthesis I
Ppha_2249	PWY-7206	pyrimidine deoxyribonucleotides dephosphorylation
Ppha_2259	PWY-6123	inosine-5'-phosphate biosynthesis I
Ppha_2259	PWY-6124	inosine-5'-phosphate biosynthesis II
Ppha_2259	PWY-7234	inosine-5'-phosphate biosynthesis III
Ppha_2265	PWY-7153	grixazone biosynthesis
Ppha_2279	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Ppha_2279	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
Ppha_2280	PWY-6703	preQ<sub>0</sub> biosynthesis
Ppha_2285	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Ppha_2285	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
Ppha_2285	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
Ppha_2285	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
Ppha_2289	PWY-5659	GDP-mannose biosynthesis
Ppha_2289	PWY-6073	alginate biosynthesis I (algal)
Ppha_2289	PWY-6082	alginate biosynthesis II (bacterial)
Ppha_2289	PWY-882	L-ascorbate biosynthesis I (L-galactose pathway)
Ppha_2290	PWY-3821	galactose degradation III
Ppha_2290	PWY-6317	galactose degradation I (Leloir pathway)
Ppha_2290	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
Ppha_2290	PWY-6527	stachyose degradation
Ppha_2290	PWY-7328	superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
Ppha_2290	PWY-7344	UDP-D-galactose biosynthesis
Ppha_2291	PWY-3221	dTDP-L-rhamnose biosynthesis II
Ppha_2291	PWY-6808	dTDP-D-forosamine biosynthesis
Ppha_2291	PWY-6942	dTDP-D-desosamine biosynthesis
Ppha_2291	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
Ppha_2291	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
Ppha_2291	PWY-6974	dTDP-L-olivose biosynthesis
Ppha_2291	PWY-6976	dTDP-L-mycarose biosynthesis
Ppha_2291	PWY-7104	dTDP-L-megosamine biosynthesis
Ppha_2291	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
Ppha_2291	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
Ppha_2291	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
Ppha_2291	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
Ppha_2291	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
Ppha_2291	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
Ppha_2291	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
Ppha_2291	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
Ppha_2300	PWY-3221	dTDP-L-rhamnose biosynthesis II
Ppha_2300	PWY-6808	dTDP-D-forosamine biosynthesis
Ppha_2300	PWY-6942	dTDP-D-desosamine biosynthesis
Ppha_2300	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
Ppha_2300	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
Ppha_2300	PWY-6974	dTDP-L-olivose biosynthesis
Ppha_2300	PWY-6976	dTDP-L-mycarose biosynthesis
Ppha_2300	PWY-7104	dTDP-L-megosamine biosynthesis
Ppha_2300	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
Ppha_2300	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
Ppha_2300	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
Ppha_2300	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
Ppha_2300	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
Ppha_2300	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
Ppha_2300	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
Ppha_2300	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
Ppha_2306	PWY-5194	siroheme biosynthesis
Ppha_2306	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
Ppha_2307	PWY-5194	siroheme biosynthesis
Ppha_2307	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
Ppha_2311	PWY-5674	nitrate reduction IV (dissimilatory)
Ppha_2320	PWY-6683	sulfate reduction III (assimilatory)
Ppha_2321	PWY-6683	sulfate reduction III (assimilatory)
Ppha_2334	PWY-5532	adenosine nucleotides degradation IV
Ppha_2334	PWY-5723	Rubisco shunt
Ppha_2383	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
Ppha_2384	PWY-4381	fatty acid biosynthesis initiation I
Ppha_2384	PWY-5743	3-hydroxypropanoate cycle
Ppha_2384	PWY-5744	glyoxylate assimilation
Ppha_2384	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Ppha_2384	PWY-6679	jadomycin biosynthesis
Ppha_2384	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Ppha_2386	PWY-5381	pyridine nucleotide cycling (plants)
Ppha_2386	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
Ppha_2386	PWY-6596	adenosine nucleotides degradation I
Ppha_2386	PWY-6606	guanosine nucleotides degradation II
Ppha_2386	PWY-6607	guanosine nucleotides degradation I
Ppha_2386	PWY-6608	guanosine nucleotides degradation III
Ppha_2386	PWY-7185	UTP and CTP dephosphorylation I
Ppha_2391	PWY-5958	acridone alkaloid biosynthesis
Ppha_2391	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
Ppha_2391	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
Ppha_2411	PWY-5526	bacteriochlorophyll <i>a</i> biosynthesis
Ppha_2414	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
Ppha_2414	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
Ppha_2422	PWY-5791	1,4-dihydroxy-2-naphthoate biosynthesis II (plants)
Ppha_2422	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
Ppha_2422	PWY-5901	2,3-dihydroxybenzoate biosynthesis
Ppha_2422	PWY-6406	salicylate biosynthesis I
Ppha_2423	PWY-5791	1,4-dihydroxy-2-naphthoate biosynthesis II (plants)
Ppha_2423	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
Ppha_2433	PWY-5791	1,4-dihydroxy-2-naphthoate biosynthesis II (plants)
Ppha_2433	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
Ppha_2434	PWY-5791	1,4-dihydroxy-2-naphthoate biosynthesis II (plants)
Ppha_2434	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
Ppha_2435	PWY-5791	1,4-dihydroxy-2-naphthoate biosynthesis II (plants)
Ppha_2435	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
Ppha_2437	PWY-2941	L-lysine biosynthesis II
Ppha_2437	PWY-2942	L-lysine biosynthesis III
Ppha_2437	PWY-5097	L-lysine biosynthesis VI
Ppha_2463	PWY-2201	folate transformations I
Ppha_2463	PWY-3841	folate transformations II
Ppha_2482	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
Ppha_2482	PWY-6855	chitin degradation I (archaea)
Ppha_2482	PWY-6906	chitin derivatives degradation
Ppha_2483	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
Ppha_2501	PWY-6825	phosphatidylcholine biosynthesis V
Ppha_2550	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Ppha_2554	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
Ppha_2559	PWY-2941	L-lysine biosynthesis II
Ppha_2559	PWY-2942	L-lysine biosynthesis III
Ppha_2559	PWY-5097	L-lysine biosynthesis VI
Ppha_2559	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Ppha_2559	PWY-6559	spermidine biosynthesis II
Ppha_2559	PWY-6562	norspermidine biosynthesis
Ppha_2559	PWY-7153	grixazone biosynthesis
Ppha_2559	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Ppha_2565	PWY-6012	acyl carrier protein metabolism I
Ppha_2565	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
Ppha_2566	PWY-5316	nicotine biosynthesis
Ppha_2566	PWY-5381	pyridine nucleotide cycling (plants)
Ppha_2566	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
Ppha_2566	PWY-7342	superpathway of nicotine biosynthesis
Ppha_2568	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
Ppha_2568	PWY-6148	tetrahydromethanopterin biosynthesis
Ppha_2568	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
Ppha_2568	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
Ppha_2569	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
Ppha_2569	PWY-6148	tetrahydromethanopterin biosynthesis
Ppha_2569	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
Ppha_2569	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
Ppha_2581	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
Ppha_2581	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
Ppha_2583	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
Ppha_2583	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
Ppha_2584	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
Ppha_2584	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
Ppha_2612	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
Ppha_2612	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
Ppha_2612	PWY-6896	thiamin salvage I
Ppha_2612	PWY-6897	thiamin salvage II
Ppha_2622	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
Ppha_2622	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Ppha_2622	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Ppha_2627	PWY-4261	glycerol degradation I
Ppha_2644	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
Ppha_2672	PWY-4381	fatty acid biosynthesis initiation I
Ppha_2672	PWY-5743	3-hydroxypropanoate cycle
Ppha_2672	PWY-5744	glyoxylate assimilation
Ppha_2672	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Ppha_2672	PWY-6679	jadomycin biosynthesis
Ppha_2672	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Ppha_2687	PWY-7560	methylerythritol phosphate pathway II
Ppha_2689	PWY-1042	glycolysis IV (plant cytosol)
Ppha_2689	PWY-1622	formaldehyde assimilation I (serine pathway)
Ppha_2689	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
Ppha_2689	PWY-5484	glycolysis II (from fructose 6-phosphate)
Ppha_2689	PWY-5723	Rubisco shunt
Ppha_2689	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Ppha_2689	PWY-6886	1-butanol autotrophic biosynthesis
Ppha_2689	PWY-6901	superpathway of glucose and xylose degradation
Ppha_2689	PWY-7003	glycerol degradation to butanol
Ppha_2689	PWY-7124	ethylene biosynthesis V (engineered)
Ppha_2689	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
Ppha_2693	PWY-101	photosynthesis light reactions
Ppha_2693	PWY-6785	hydrogen production VIII
Ppha_2694	PWY-2941	L-lysine biosynthesis II
Ppha_2694	PWY-5097	L-lysine biosynthesis VI
Ppha_2703	PWY-2941	L-lysine biosynthesis II
Ppha_2703	PWY-2942	L-lysine biosynthesis III
Ppha_2703	PWY-5097	L-lysine biosynthesis VI
Ppha_2703	PWY-6559	spermidine biosynthesis II
Ppha_2703	PWY-6562	norspermidine biosynthesis
Ppha_2703	PWY-7153	grixazone biosynthesis
Ppha_2705	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Ppha_2706	PWY-702	L-methionine biosynthesis II
Ppha_2708	PWY-5667	CDP-diacylglycerol biosynthesis I
Ppha_2708	PWY-5981	CDP-diacylglycerol biosynthesis III
Ppha_2708	PWY-7411	superpathway of phosphatidate biosynthesis (yeast)
Ppha_2708	PWY-7417	phospholipid remodeling (phosphatidate, yeast)
Ppha_2709	PWY-6167	flavin biosynthesis II (archaea)
Ppha_2709	PWY-6168	flavin biosynthesis III (fungi)
Ppha_2710	PWY-6478	GDP-D-<i>glycero</i>-&alpha;-D-<i>manno</i>-heptose biosynthesis
Ppha_2714	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
Ppha_2714	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
Ppha_2716	PWY-3781	aerobic respiration I (cytochrome c)
Ppha_2716	PWY-4302	aerobic respiration III (alternative oxidase pathway)
Ppha_2716	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
Ppha_2716	PWY-5690	TCA cycle II (plants and fungi)
Ppha_2716	PWY-6728	methylaspartate cycle
Ppha_2716	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Ppha_2716	PWY-7254	TCA cycle VII (acetate-producers)
Ppha_2716	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Ppha_2717	PWY-3781	aerobic respiration I (cytochrome c)
Ppha_2717	PWY-4302	aerobic respiration III (alternative oxidase pathway)
Ppha_2717	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
Ppha_2717	PWY-5690	TCA cycle II (plants and fungi)
Ppha_2717	PWY-6728	methylaspartate cycle
Ppha_2717	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Ppha_2717	PWY-7254	TCA cycle VII (acetate-producers)
Ppha_2717	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Ppha_2737	PWY-6825	phosphatidylcholine biosynthesis V
Ppha_2754	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
Ppha_2754	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
Ppha_2782	PWY-2622	trehalose biosynthesis IV
Ppha_2800	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Ppha_2806	PWY-5686	UMP biosynthesis
Ppha_2807	PWY-7303	3-dimethylallyl-4-hydroxybenzoate biosynthesis
Ppha_2808	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
Ppha_2808	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
Ppha_2808	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
Ppha_2810	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
Ppha_2810	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
Ppha_2811	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
Ppha_2811	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
Ppha_2815	PWY-5667	CDP-diacylglycerol biosynthesis I
Ppha_2815	PWY-5981	CDP-diacylglycerol biosynthesis III
Ppha_2817	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Ppha_2817	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
Ppha_2817	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
Ppha_2818	PWY-2941	L-lysine biosynthesis II
Ppha_2818	PWY-2942	L-lysine biosynthesis III
Ppha_2818	PWY-5097	L-lysine biosynthesis VI
Ppha_2818	PWY-6559	spermidine biosynthesis II
Ppha_2818	PWY-6562	norspermidine biosynthesis
Ppha_2818	PWY-7153	grixazone biosynthesis
Ppha_2835	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
Ppha_2836	PWY-6519	8-amino-7-oxononanoate biosynthesis I
Ppha_2839	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
Ppha_2840	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
Ppha_2840	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
Ppha_2851	PWY-3781	aerobic respiration I (cytochrome c)
Ppha_2851	PWY-4302	aerobic respiration III (alternative oxidase pathway)
Ppha_2851	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
Ppha_2851	PWY-5690	TCA cycle II (plants and fungi)
Ppha_2851	PWY-6728	methylaspartate cycle
Ppha_2851	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Ppha_2851	PWY-7254	TCA cycle VII (acetate-producers)
Ppha_2851	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Ppha_2852	PWY-3781	aerobic respiration I (cytochrome c)
Ppha_2852	PWY-4302	aerobic respiration III (alternative oxidase pathway)
Ppha_2852	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
Ppha_2852	PWY-5690	TCA cycle II (plants and fungi)
Ppha_2852	PWY-6728	methylaspartate cycle
Ppha_2852	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Ppha_2852	PWY-7254	TCA cycle VII (acetate-producers)
Ppha_2852	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Ppha_2854	PWY-5651	L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
Ppha_2854	PWY-6309	L-tryptophan degradation XI (mammalian, via kynurenine)
Ppha_2875	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Ppha_2875	PWY-5723	Rubisco shunt
Ppha_2880	PWY-5381	pyridine nucleotide cycling (plants)
Ppha_2880	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
Ppha_2893	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Ppha_2893	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Ppha_2894	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
Ppha_2894	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
Ppha_2894	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
Ppha_2894	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
Ppha_2896	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Ppha_2896	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Ppha_2897	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
Ppha_2897	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
Ppha_2897	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
Ppha_2898	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Ppha_2898	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Ppha_2904	PWY-3461	L-tyrosine biosynthesis II
Ppha_2904	PWY-3462	L-phenylalanine biosynthesis II
Ppha_2904	PWY-6120	L-tyrosine biosynthesis III
Ppha_2904	PWY-6627	salinosporamide A biosynthesis
Ppha_2906	PWY-1042	glycolysis IV (plant cytosol)
Ppha_2906	PWY-5484	glycolysis II (from fructose 6-phosphate)
Ppha_2906	PWY-6886	1-butanol autotrophic biosynthesis
Ppha_2906	PWY-6901	superpathway of glucose and xylose degradation
Ppha_2906	PWY-7003	glycerol degradation to butanol
