PERMA_0001	SSF50129	GroES-like
PERMA_0002	SSF109604	HD-domain/PDEase-like
PERMA_0002	SSF55021	ACT-like
PERMA_0002	SSF81301	Nucleotidyltransferase
PERMA_0002	SSF81593	Nucleotidyltransferase substrate binding subunit/domain
PERMA_0003	SSF118116	DNA mismatch repair protein MutL
PERMA_0003	SSF54211	Ribosomal protein S5 domain 2-like
PERMA_0003	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
PERMA_0005	SSF143968	UbiD C-terminal domain-like
PERMA_0005	SSF50475	FMN-binding split barrel
PERMA_0008	SSF54211	Ribosomal protein S5 domain 2-like
PERMA_0010	SSF53328	Formyltransferase
PERMA_0011	SSF48208	Six-hairpin glycosidases
PERMA_0012	SSF55326	PurM N-terminal domain-like
PERMA_0012	SSF56042	PurM C-terminal domain-like
PERMA_0013	SSF56317	Carbon-nitrogen hydrolase
PERMA_0014	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PERMA_0015	SSF111038	YjbQ-like
PERMA_0016	SSF53271	PRTase-like
PERMA_0017	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
PERMA_0018	SSF69500	DTD-like
PERMA_0019	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PERMA_0022	SSF50800	PK beta-barrel domain-like
PERMA_0022	SSF51621	Phosphoenolpyruvate/pyruvate domain
PERMA_0022	SSF52935	PK C-terminal domain-like
PERMA_0023	SSF55073	Nucleotide cyclase
PERMA_0024	SSF46785	"Winged helix" DNA-binding domain
PERMA_0025	SSF56524	Oxidoreductase molybdopterin-binding domain
PERMA_0026	SSF55729	Acyl-CoA N-acyltransferases (Nat)
PERMA_0027	SSF53187	Zn-dependent exopeptidases
PERMA_0027	SSF55031	Bacterial exopeptidase dimerisation domain
PERMA_0028	SSF102114	Radical SAM enzymes
PERMA_0029	SSF52317	Class I glutamine amidotransferase-like
PERMA_0029	SSF52402	Adenine nucleotide alpha hydrolases-like
PERMA_0029	SSF54810	GMP synthetase C-terminal dimerisation domain
PERMA_0031	SSF51735	NAD(P)-binding Rossmann-fold domains
PERMA_0032	SSF111384	OmpH-like
PERMA_0033	SSF103486	V-type ATP synthase subunit C
PERMA_0035	SSF81333	F1F0 ATP synthase subunit C
PERMA_0036	SSF159468	AtpF-like
PERMA_0038	SSF47917	C-terminal domain of alpha and beta subunits of F1 ATP synthase
PERMA_0038	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PERMA_0039	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PERMA_0041	SSF50249	Nucleic acid-binding proteins
PERMA_0043	SSF52096	ClpP/crotonase
PERMA_0044	SSF54631	CBS-domain pair
PERMA_0045	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
PERMA_0046	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PERMA_0047	SSF53187	Zn-dependent exopeptidases
PERMA_0047	SSF55031	Bacterial exopeptidase dimerisation domain
PERMA_0049	SSF49503	Cupredoxins
PERMA_0051	SSF141091	L21p-like
PERMA_0052	SSF110324	Ribosomal L27 protein-like
PERMA_0054	SSF56519	Penicillin binding protein dimerisation domain
PERMA_0054	SSF56601	beta-lactamase/transpeptidase-like
PERMA_0057	SSF53067	Actin-like ATPase domain
PERMA_0058	SSF51569	Aldolase
PERMA_0059	SSF51735	NAD(P)-binding Rossmann-fold domains
PERMA_0060	SSF53383	PLP-dependent transferases
PERMA_0061	SSF52121	Lumazine synthase
PERMA_0062	SSF48013	NusB-like
PERMA_0064	SSF56300	Metallo-dependent phosphatases
PERMA_0066	SSF110997	Sporulation related repeat
PERMA_0066	SSF48452	TPR-like
PERMA_0067	SSF52833	Thioredoxin-like
PERMA_0068	SSF51730	FAD-linked oxidoreductase
PERMA_0069	SSF109604	HD-domain/PDEase-like
PERMA_0069	SSF54791	Eukaryotic type KH-domain (KH-domain type I)
PERMA_0070	SSF100950	NagB/RpiA/CoA transferase-like
PERMA_0071	SSF46955	Putative DNA-binding domain
PERMA_0071	SSF50249	Nucleic acid-binding proteins
PERMA_0071	SSF54991	Anticodon-binding domain of PheRS
PERMA_0071	SSF55681	Class II aaRS and biotin synthetases
PERMA_0071	SSF56037	PheT/TilS domain
PERMA_0072	SSF46589	tRNA-binding arm
PERMA_0072	SSF55681	Class II aaRS and biotin synthetases
PERMA_0073	SSF74731	Ribosomal protein L20
PERMA_0074	SSF143034	L35p-like
PERMA_0075	SSF47175	Cytochromes
PERMA_0075	SSF48695	Multiheme cytochromes
PERMA_0076	SSF52972	ITPase-like
PERMA_0077	SSF48695	Multiheme cytochromes
PERMA_0078	SSF53098	Ribonuclease H-like
PERMA_0079	SSF75625	YebC-like
PERMA_0080	SSF48150	DNA-glycosylase
PERMA_0081	SSF69593	Glycerol-3-phosphate (1)-acyltransferase
PERMA_0083	SSF141371	PilZ domain-like
PERMA_0085	SSF103088	OmpA-like
PERMA_0086	SSF103088	OmpA-like
PERMA_0087	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
PERMA_0087	SSF88697	PUA domain-like
PERMA_0088	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
PERMA_0089	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
PERMA_0089	SSF88946	Sigma2 domain of RNA polymerase sigma factors
PERMA_0090	SSF55205	EPT/RTPC-like
PERMA_0091	SSF50249	Nucleic acid-binding proteins
PERMA_0091	SSF55261	GAD domain-like
PERMA_0091	SSF55681	Class II aaRS and biotin synthetases
PERMA_0093	SSF48452	TPR-like
PERMA_0094	SSF56784	HAD-like
PERMA_0095	SSF48557	L-aspartase-like
PERMA_0096	SSF142433	CinA-like
PERMA_0096	SSF53218	Molybdenum cofactor biosynthesis proteins
PERMA_0097	SSF55073	Nucleotide cyclase
PERMA_0098	SSF54631	CBS-domain pair
PERMA_0100	SSF103088	OmpA-like
PERMA_0102	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
PERMA_0103	SSF47364	Domain of the SRP/SRP receptor G-proteins
PERMA_0103	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PERMA_0104	SSF55931	Glutamine synthetase/guanido kinase
PERMA_0105	SSF141322	NfeD domain-like
PERMA_0105	SSF52096	ClpP/crotonase
PERMA_0106	SSF56821	Prismane protein-like
PERMA_0107	SSF51419	PLP-binding barrel
PERMA_0108	SSF51230	Single hybrid motif
PERMA_0109	SSF55021	ACT-like
PERMA_0110	SSF56420	Peptide deformylase
PERMA_0112	SSF160544	EscU C-terminal domain-like
PERMA_0114	SSF143447	AMMECR1-like
PERMA_0115	SSF47240	Ferritin-like
PERMA_0116	SSF53056	beta-carbonic anhydrase, cab
PERMA_0117	SSF51161	Trimeric LpxA-like enzymes
PERMA_0120	SSF46626	Cytochrome c
PERMA_0121	SSF111352	Ammonium transporter
PERMA_0122	SSF56300	Metallo-dependent phosphatases
PERMA_0123	SSF53659	Isocitrate/Isopropylmalate dehydrogenase-like
PERMA_0124	SSF109604	HD-domain/PDEase-like
PERMA_0124	SSF141868	EAL domain-like
PERMA_0125	SSF75169	DsrEFH-like
PERMA_0126	SSF75169	DsrEFH-like
PERMA_0127	SSF75169	DsrEFH-like
PERMA_0128	SSF64307	SirA-like
PERMA_0129	SSF69572	Activating enzymes of the ubiquitin-like proteins
PERMA_0130	SSF51412	Inosine monophosphate dehydrogenase (IMPDH)
PERMA_0132	SSF64182	DHH phosphoesterases
PERMA_0133	SSF52833	Thioredoxin-like
PERMA_0136	SSF89095	GatB/YqeY motif
PERMA_0138	SSF75169	DsrEFH-like
PERMA_0140	SSF50156	PDZ domain-like
PERMA_0141	SSF51735	NAD(P)-binding Rossmann-fold domains
PERMA_0141	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
PERMA_0141	SSF69055	1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain
PERMA_0142	SSF52833	Thioredoxin-like
PERMA_0143	SSF54862	4Fe-4S ferredoxins
PERMA_0144	SSF143243	Nqo5-like
PERMA_0144	SSF56762	HydB/Nqo4-like
PERMA_0146	SSF101307	YutG-like
PERMA_0148	SSF55909	Pentein
PERMA_0149	SSF53927	Cytidine deaminase-like
PERMA_0150	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PERMA_0151	SSF48208	Six-hairpin glycosidases
PERMA_0152	SSF54285	MoaD/ThiS
PERMA_0153	SSF53597	Dihydrofolate reductase-like
PERMA_0155	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
PERMA_0155	SSF51735	NAD(P)-binding Rossmann-fold domains
PERMA_0157	SSF55021	ACT-like
PERMA_0158	SSF52467	DHS-like NAD/FAD-binding domain
PERMA_0158	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
PERMA_0159	SSF51905	FAD/NAD(P)-binding domain
PERMA_0161	SSF54690	Molybdopterin synthase subunit MoaE
PERMA_0162	SSF52833	Thioredoxin-like
PERMA_0163	SSF53383	PLP-dependent transferases
PERMA_0164	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
PERMA_0164	SSF55174	Alpha-L RNA-binding motif
PERMA_0165	SSF53697	SIS domain
PERMA_0165	SSF54631	CBS-domain pair
PERMA_0166	SSF46785	"Winged helix" DNA-binding domain
PERMA_0166	SSF53850	Periplasmic binding protein-like II
PERMA_0168	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PERMA_0169	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PERMA_0170	SSF81301	Nucleotidyltransferase
PERMA_0170	SSF81593	Nucleotidyltransferase substrate binding subunit/domain
PERMA_0171	SSF117916	Fe-S cluster assembly (FSCA) domain-like
PERMA_0172	SSF50156	PDZ domain-like
PERMA_0172	SSF50494	Trypsin-like serine proteases
PERMA_0173	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
PERMA_0173	SSF88946	Sigma2 domain of RNA polymerase sigma factors
PERMA_0176	SSF52374	Nucleotidylyl transferase
PERMA_0176	SSF55174	Alpha-L RNA-binding motif
PERMA_0177	SSF53383	PLP-dependent transferases
PERMA_0178	SSF50249	Nucleic acid-binding proteins
PERMA_0181	SSF160527	V-type ATPase subunit E-like
PERMA_0181	SSF47928	N-terminal domain of the delta subunit of the F1F0-ATP synthase
PERMA_0182	SSF47917	C-terminal domain of alpha and beta subunits of F1 ATP synthase
PERMA_0182	SSF50615	N-terminal domain of alpha and beta subunits of F1 ATP synthase
PERMA_0182	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PERMA_0183	SSF52943	ATP synthase (F1-ATPase), gamma subunit
PERMA_0184	SSF47917	C-terminal domain of alpha and beta subunits of F1 ATP synthase
PERMA_0184	SSF50615	N-terminal domain of alpha and beta subunits of F1 ATP synthase
PERMA_0184	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PERMA_0185	SSF53067	Actin-like ATPase domain
PERMA_0187	SSF50156	PDZ domain-like
PERMA_0187	SSF52096	ClpP/crotonase
PERMA_0188	SSF141868	EAL domain-like
PERMA_0188	SSF55073	Nucleotide cyclase
PERMA_0189	SSF56281	Metallo-hydrolase/oxidoreductase
PERMA_0190	SSF103263	Chorismate synthase, AroC
PERMA_0191	SSF81336	F1F0 ATP synthase subunit A
PERMA_0192	SSF52402	Adenine nucleotide alpha hydrolases-like
PERMA_0193	SSF81333	F1F0 ATP synthase subunit C
PERMA_0197	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PERMA_0198	SSF50249	Nucleic acid-binding proteins
PERMA_0198	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PERMA_0198	SSF68912	Rho N-terminal domain-like
PERMA_0199	SSF143800	L28p-like
PERMA_0200	SSF75620	Release factor
PERMA_0207	SSF52954	Class II aaRS ABD-related
PERMA_0207	SSF55681	Class II aaRS and biotin synthetases
PERMA_0207	SSF55826	YbaK/ProRS associated domain
PERMA_0208	SSF55781	GAF domain-like
PERMA_0208	SSF55785	PYP-like sensor domain (PAS domain)
PERMA_0209	SSF160246	EspE N-terminal domain-like
PERMA_0209	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PERMA_0210	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
PERMA_0212	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PERMA_0212	SSF81271	TGS-like
PERMA_0214	SSF118215	Proton glutamate symport protein
PERMA_0217	SSF101498	Anti-sigma factor FlgM
PERMA_0218	SSF53383	PLP-dependent transferases
PERMA_0219	SSF53067	Actin-like ATPase domain
PERMA_0220	SSF53067	Actin-like ATPase domain
PERMA_0221	SSF55021	ACT-like
PERMA_0222	SSF54285	MoaD/ThiS
PERMA_0223	SSF53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes
PERMA_0224	SSF51412	Inosine monophosphate dehydrogenase (IMPDH)
PERMA_0224	SSF54631	CBS-domain pair
PERMA_0227	SSF53748	Phosphoglycerate kinase
PERMA_0228	SSF56655	Carbohydrate phosphatase
PERMA_0230	SSF48600	Chorismate mutase II
PERMA_0230	SSF53850	Periplasmic binding protein-like II
PERMA_0230	SSF55021	ACT-like
PERMA_0231	SSF52313	Ribosomal protein S2
PERMA_0232	SSF46934	UBA-like
PERMA_0232	SSF54713	Elongation factor Ts (EF-Ts), dimerisation domain
PERMA_0233	SSF53633	Carbamate kinase-like
PERMA_0234	SSF55194	Ribosome recycling factor, RRF
PERMA_0235	SSF74942	YhbC-like, C-terminal domain
PERMA_0235	SSF75420	YhbC-like, N-terminal domain
PERMA_0236	SSF50249	Nucleic acid-binding proteins
PERMA_0236	SSF54814	Prokaryotic type KH domain (KH-domain type II)
PERMA_0236	SSF69705	Transcription factor NusA, N-terminal domain
PERMA_0237	SSF55315	L30e-like
PERMA_0238	SSF50447	Translation proteins
PERMA_0238	SSF52156	Initiation factor IF2/eIF5b, domain 3
PERMA_0238	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PERMA_0241	SSF102405	MCP/YpsA-like
PERMA_0241	SSF47781	RuvA domain 2-like
PERMA_0242	SSF46915	Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3
PERMA_0242	SSF50249	Nucleic acid-binding proteins
PERMA_0242	SSF54211	Ribosomal protein S5 domain 2-like
PERMA_0242	SSF54791	Eukaryotic type KH-domain (KH-domain type I)
PERMA_0242	SSF55666	Ribonuclease PH domain 2-like
PERMA_0243	SSF47060	S15/NS1 RNA-binding domain
PERMA_0245	SSF88723	PIN domain-like
PERMA_0246	SSF47598	Ribbon-helix-helix
PERMA_0247	SSF56024	Phospholipase D/nuclease
PERMA_0249	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PERMA_0250	SSF48150	DNA-glycosylase
PERMA_0251	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
PERMA_0255	SSF141868	EAL domain-like
PERMA_0255	SSF55073	Nucleotide cyclase
PERMA_0256	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PERMA_0257	SSF53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes
PERMA_0258	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
PERMA_0258	SSF51735	NAD(P)-binding Rossmann-fold domains
PERMA_0259	SSF54211	Ribosomal protein S5 domain 2-like
PERMA_0259	SSF55666	Ribonuclease PH domain 2-like
PERMA_0260	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PERMA_0264	SSF53613	Ribokinase-like
PERMA_0264	SSF64153	YjeF N-terminal domain-like
PERMA_0265	SSF51569	Aldolase
PERMA_0267	SSF141868	EAL domain-like
PERMA_0267	SSF55073	Nucleotide cyclase
PERMA_0268	SSF56655	Carbohydrate phosphatase
PERMA_0269	SSF50129	GroES-like
PERMA_0269	SSF51735	NAD(P)-binding Rossmann-fold domains
PERMA_0271	SSF54913	GlnB-like
PERMA_0273	SSF49764	HSP20-like chaperones
PERMA_0275	SSF53187	Zn-dependent exopeptidases
PERMA_0275	SSF55031	Bacterial exopeptidase dimerisation domain
PERMA_0276	SSF56322	ADC synthase
PERMA_0277	SSF46785	"Winged helix" DNA-binding domain
PERMA_0277	SSF55781	GAF domain-like
PERMA_0280	SSF102114	Radical SAM enzymes
PERMA_0281	SSF101353	Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS)
PERMA_0281	SSF50447	Translation proteins
PERMA_0281	SSF55186	ThrRS/AlaRS common domain
PERMA_0281	SSF55681	Class II aaRS and biotin synthetases
PERMA_0282	SSF117856	AF0104/ALDC/Ptd012-like
PERMA_0284	SSF53271	PRTase-like
PERMA_0286	SSF56317	Carbon-nitrogen hydrolase
PERMA_0287	SSF55326	PurM N-terminal domain-like
PERMA_0287	SSF56042	PurM C-terminal domain-like
PERMA_0288	SSF49503	Cupredoxins
PERMA_0289	SSF81442	Cytochrome c oxidase subunit I-like
PERMA_0293	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PERMA_0293	SSF52980	Restriction endonuclease-like
PERMA_0294	SSF46785	"Winged helix" DNA-binding domain
PERMA_0294	SSF51206	cAMP-binding domain-like
PERMA_0296	SSF102114	Radical SAM enzymes
PERMA_0297	SSF51998	PFL-like glycyl radical enzymes
PERMA_0298	SSF50692	ADC-like
PERMA_0298	SSF53706	Formate dehydrogenase/DMSO reductase, domains 1-3
PERMA_0299	SSF54862	4Fe-4S ferredoxins
PERMA_0300	SSF54862	4Fe-4S ferredoxins
PERMA_0301	SSF48695	Multiheme cytochromes
PERMA_0302	SSF54862	4Fe-4S ferredoxins
PERMA_0303	SSF50998	Quinoprotein alcohol dehydrogenase-like
PERMA_0306	SSF46626	Cytochrome c
PERMA_0306	SSF51004	C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
PERMA_0307	SSF46626	Cytochrome c
PERMA_0307	SSF51004	C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
PERMA_0308	SSF102114	Radical SAM enzymes
PERMA_0309	SSF51004	C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
PERMA_0310	SSF53790	Tetrapyrrole methylase
PERMA_0311	SSF46785	"Winged helix" DNA-binding domain
PERMA_0312	SSF111126	Ligand-binding domain in the NO signalling and Golgi transport
PERMA_0314	SSF81442	Cytochrome c oxidase subunit I-like
PERMA_0316	SSF51182	RmlC-like cupins
PERMA_0318	SSF46785	"Winged helix" DNA-binding domain
PERMA_0321	SSF51569	Aldolase
PERMA_0322	SSF109635	DnaK suppressor protein DksA, alpha-hairpin domain
PERMA_0322	SSF57716	Glucocorticoid receptor-like (DNA-binding domain)
PERMA_0323	SSF52499	Isochorismatase-like hydrolases
PERMA_0324	SSF117782	YbjQ-like
PERMA_0325	SSF53098	Ribonuclease H-like
PERMA_0325	SSF56672	DNA/RNA polymerases
PERMA_0326	SSF48403	Ankyrin repeat
PERMA_0327	SSF57863	ArfGap/RecO-like zinc finger
PERMA_0329	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PERMA_0330	SSF55620	Tetrahydrobiopterin biosynthesis enzymes-like
PERMA_0333	SSF143548	Serine metabolism enzymes domain
PERMA_0333	SSF51735	NAD(P)-binding Rossmann-fold domains
PERMA_0333	SSF52283	Formate/glycerate dehydrogenase catalytic domain-like
PERMA_0333	SSF55021	ACT-like
PERMA_0334	SSF51735	NAD(P)-binding Rossmann-fold domains
PERMA_0334	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
PERMA_0336	SSF55331	Tautomerase/MIF
PERMA_0337	SSF46689	Homeodomain-like
PERMA_0337	SSF52172	CheY-like
PERMA_0337	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PERMA_0338	SSF50621	Alanine racemase C-terminal domain-like
PERMA_0338	SSF51419	PLP-binding barrel
PERMA_0339	SSF55008	HMA, heavy metal-associated domain
PERMA_0340	SSF56784	HAD-like
PERMA_0340	SSF81653	Calcium ATPase, transduction domain A
PERMA_0340	SSF81665	Calcium ATPase, transmembrane domain M
PERMA_0341	SSF51695	PLC-like phosphodiesterases
PERMA_0342	SSF53383	PLP-dependent transferases
PERMA_0343	SSF53254	Phosphoglycerate mutase-like
PERMA_0344	SSF55681	Class II aaRS and biotin synthetases
PERMA_0345	SSF54534	FKBP-like
PERMA_0346	SSF102114	Radical SAM enzymes
PERMA_0349	SSF102405	MCP/YpsA-like
PERMA_0351	SSF54862	4Fe-4S ferredoxins
PERMA_0352	SSF56935	Porins
PERMA_0355	SSF51161	Trimeric LpxA-like enzymes
PERMA_0356	SSF52833	Thioredoxin-like
PERMA_0357	SSF46785	"Winged helix" DNA-binding domain
PERMA_0359	SSF46548	alpha-helical ferredoxin
PERMA_0359	SSF54292	2Fe-2S ferredoxin-like
PERMA_0360	SSF55620	Tetrahydrobiopterin biosynthesis enzymes-like
PERMA_0361	SSF48576	Terpenoid synthases
PERMA_0362	SSF52980	Restriction endonuclease-like
PERMA_0363	SSF53098	Ribonuclease H-like
PERMA_0364	SSF50104	Translation proteins SH3-like domain
PERMA_0365	SSF52833	Thioredoxin-like
PERMA_0366	SSF101386	all-alpha NTP pyrophosphatases
PERMA_0366	SSF141734	HisI-like
PERMA_0368	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
PERMA_0368	SSF52922	TK C-terminal domain-like
PERMA_0369	SSF103256	Hypothetical protein TM0160
PERMA_0370	SSF48403	Ankyrin repeat
PERMA_0371	SSF48403	Ankyrin repeat
PERMA_0372	SSF48403	Ankyrin repeat
PERMA_0373	SSF51735	NAD(P)-binding Rossmann-fold domains
PERMA_0373	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
PERMA_0375	SSF48452	TPR-like
PERMA_0376	SSF64005	Undecaprenyl diphosphate synthase
PERMA_0377	SSF102114	Radical SAM enzymes
PERMA_0380	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PERMA_0380	SSF54211	Ribosomal protein S5 domain 2-like
PERMA_0382	SSF143100	TTHA1013/TTHA0281-like
PERMA_0384	SSF102114	Radical SAM enzymes
PERMA_0385	SSF141868	EAL domain-like
PERMA_0385	SSF55073	Nucleotide cyclase
PERMA_0386	SSF46626	Cytochrome c
PERMA_0387	SSF53659	Isocitrate/Isopropylmalate dehydrogenase-like
PERMA_0388	SSF51690	Nicotinate/Quinolinate PRTase C-terminal domain-like
PERMA_0388	SSF54675	Nicotinate/Quinolinate PRTase N-terminal domain-like
PERMA_0391	SSF89360	HesB-like domain
PERMA_0392	SSF52096	ClpP/crotonase
PERMA_0393	SSF89919	Ribosome-binding factor A, RbfA
PERMA_0394	SSF103007	Hypothetical protein TT1725
PERMA_0395	SSF51556	Metallo-dependent hydrolases
PERMA_0396	SSF140990	FtsH protease domain-like
PERMA_0396	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PERMA_0397	SSF52402	Adenine nucleotide alpha hydrolases-like
PERMA_0397	SSF56037	PheT/TilS domain
PERMA_0397	SSF82829	MesJ substrate recognition domain-like
PERMA_0399	SSF46992	Ribosomal protein S20
PERMA_0401	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
PERMA_0402	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PERMA_0402	SSF56712	Prokaryotic type I DNA topoisomerase
PERMA_0403	SSF51735	NAD(P)-binding Rossmann-fold domains
PERMA_0404	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
PERMA_0405	SSF51395	FMN-linked oxidoreductases
PERMA_0406	SSF55486	Metalloproteases ("zincins"), catalytic domain
PERMA_0407	SSF54909	Dimeric alpha+beta barrel
PERMA_0408	SSF51649	RuBisCo, C-terminal domain
PERMA_0409	SSF56784	HAD-like
PERMA_0410	SSF46626	Cytochrome c
PERMA_0411	SSF81442	Cytochrome c oxidase subunit I-like
PERMA_0412	SSF46626	Cytochrome c
PERMA_0415	SSF49265	Fibronectin type III
PERMA_0416	SSF144091	Rhomboid-like
PERMA_0417	SSF51569	Aldolase
PERMA_0419	SSF52833	Thioredoxin-like
PERMA_0422	SSF74653	TolA/TonB C-terminal domain
PERMA_0423	SSF53098	Ribonuclease H-like
PERMA_0424	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PERMA_0424	SSF54211	Ribosomal protein S5 domain 2-like
PERMA_0425	SSF52141	Uracil-DNA glycosylase-like
PERMA_0426	SSF51366	Ribulose-phoshate binding barrel
PERMA_0428	SSF69754	Ribosome binding protein Y (YfiA homologue)
PERMA_0429	SSF52161	Ribosomal protein L13
PERMA_0430	SSF54211	Ribosomal protein S5 domain 2-like
PERMA_0431	SSF51735	NAD(P)-binding Rossmann-fold domains
PERMA_0431	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
PERMA_0432	SSF53613	Ribokinase-like
PERMA_0433	SSF82697	PurS-like
PERMA_0434	SSF52833	Thioredoxin-like
PERMA_0435	SSF52317	Class I glutamine amidotransferase-like
PERMA_0437	SSF109604	HD-domain/PDEase-like
PERMA_0438	SSF110997	Sporulation related repeat
PERMA_0440	SSF49354	PapD-like
PERMA_0443	SSF46689	Homeodomain-like
PERMA_0444	SSF53850	Periplasmic binding protein-like II
PERMA_0444	SSF54782	Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain
PERMA_0446	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PERMA_0446	SSF90123	ABC transporter transmembrane region
PERMA_0447	SSF89550	PHP domain-like
PERMA_0448	SSF63892	Pyridoxine 5'-phosphate synthase
PERMA_0449	SSF48317	Acid phosphatase/Vanadium-dependent haloperoxidase
PERMA_0450	SSF53187	Zn-dependent exopeptidases
PERMA_0451	SSF53067	Actin-like ATPase domain
PERMA_0454	SSF51735	NAD(P)-binding Rossmann-fold domains
PERMA_0454	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
PERMA_0455	SSF64182	DHH phosphoesterases
PERMA_0457	SSF48150	DNA-glycosylase
PERMA_0458	SSF47807	5' to 3' exonuclease, C-terminal subdomain
PERMA_0458	SSF88723	PIN domain-like
PERMA_0459	SSF51261	Duplicated hybrid motif
PERMA_0460	SSF51569	Aldolase
PERMA_0461	SSF75217	alpha/beta knot
PERMA_0461	SSF88697	PUA domain-like
PERMA_0462	SSF81345	ABC transporter involved in vitamin B12 uptake, BtuC
PERMA_0463	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PERMA_0464	SSF50129	GroES-like
PERMA_0464	SSF51735	NAD(P)-binding Rossmann-fold domains
PERMA_0465	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PERMA_0466	SSF50037	C-terminal domain of transcriptional repressors
PERMA_0469	SSF53244	MurD-like peptide ligases, peptide-binding domain
PERMA_0469	SSF53623	MurD-like peptide ligases, catalytic domain
PERMA_0469	SSF63418	MurE/MurF N-terminal domain
PERMA_0470	SSF51735	NAD(P)-binding Rossmann-fold domains
PERMA_0470	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
PERMA_0471	SSF88723	PIN domain-like
PERMA_0473	SSF52374	Nucleotidylyl transferase
PERMA_0474	SSF52467	DHS-like NAD/FAD-binding domain
PERMA_0475	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PERMA_0479	SSF53955	Lysozyme-like
PERMA_0483	SSF48452	TPR-like
PERMA_0484	SSF57938	DnaJ/Hsp40 cysteine-rich domain
PERMA_0485	SSF56925	OMPA-like
PERMA_0487	SSF102215	Creatininase
PERMA_0488	SSF47781	RuvA domain 2-like
PERMA_0490	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PERMA_0490	SSF82051	Obg GTP-binding protein N-terminal domain
PERMA_0491	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PERMA_0491	SSF56024	Phospholipase D/nuclease
PERMA_0492	SSF143800	L28p-like
PERMA_0493	SSF54631	CBS-domain pair
PERMA_0493	SSF55073	Nucleotide cyclase
PERMA_0494	SSF102114	Radical SAM enzymes
PERMA_0495	SSF100950	NagB/RpiA/CoA transferase-like
PERMA_0496	SSF142338	CofD-like
PERMA_0497	SSF46977	Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain
PERMA_0497	SSF51905	FAD/NAD(P)-binding domain
PERMA_0497	SSF56425	Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain
PERMA_0498	SSF54364	Translation initiation factor IF3, N-terminal domain
PERMA_0498	SSF55200	Translation initiation factor IF3, C-terminal domain
PERMA_0499	SSF51905	FAD/NAD(P)-binding domain
PERMA_0501	SSF51366	Ribulose-phoshate binding barrel
PERMA_0503	SSF48452	TPR-like
PERMA_0504	SSF52402	Adenine nucleotide alpha hydrolases-like
PERMA_0505	SSF52016	LeuD/IlvD-like
PERMA_0506	SSF51735	NAD(P)-binding Rossmann-fold domains
PERMA_0506	SSF52283	Formate/glycerate dehydrogenase catalytic domain-like
PERMA_0507	SSF51735	NAD(P)-binding Rossmann-fold domains
PERMA_0508	SSF47336	ACP-like
PERMA_0509	SSF53901	Thiolase-like
PERMA_0511	SSF54768	dsRNA-binding domain-like
PERMA_0511	SSF69065	RNase III domain-like
PERMA_0513	SSF46689	Homeodomain-like
PERMA_0513	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PERMA_0514	SSF52833	Thioredoxin-like
PERMA_0515	SSF158472	HAMP domain-like
PERMA_0517	SSF55124	Nitrite/Sulfite reductase N-terminal domain-like
PERMA_0517	SSF56014	Nitrite and sulphite reductase 4Fe-4S domain-like
PERMA_0517	SSF64307	SirA-like
PERMA_0518	SSF52418	Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain
PERMA_0519	SSF52402	Adenine nucleotide alpha hydrolases-like
PERMA_0520	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
PERMA_0522	SSF53448	Nucleotide-diphospho-sugar transferases
PERMA_0523	SSF56104	SAICAR synthase-like
PERMA_0525	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
PERMA_0526	SSF48452	TPR-like
PERMA_0527	SSF103247	TT1751-like
PERMA_0528	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
PERMA_0529	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
PERMA_0529	SSF52922	TK C-terminal domain-like
PERMA_0530	SSF54862	4Fe-4S ferredoxins
PERMA_0531	SSF53323	Pyruvate-ferredoxin oxidoreductase, PFOR, domain III
PERMA_0532	SSF111304	Recombination protein RecR
PERMA_0533	SSF82607	YbaB-like
PERMA_0534	SSF48019	post-AAA+ oligomerization domain-like
PERMA_0534	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PERMA_0535	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PERMA_0536	SSF46785	"Winged helix" DNA-binding domain
PERMA_0536	SSF55781	GAF domain-like
PERMA_0538	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PERMA_0539	SSF50182	Sm-like ribonucleoproteins
PERMA_0540	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PERMA_0541	SSF54197	HIT-like
PERMA_0542	SSF64307	SirA-like
PERMA_0543	SSF160387	NosL/MerB-like
PERMA_0543	SSF46785	"Winged helix" DNA-binding domain
PERMA_0544	SSF54211	Ribosomal protein S5 domain 2-like
PERMA_0545	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PERMA_0546	SSF101112	Oxygen-evolving enhancer protein 3,
PERMA_0547	SSF46689	Homeodomain-like
PERMA_0547	SSF48498	Tetracyclin repressor-like, C-terminal domain
PERMA_0548	SSF64182	DHH phosphoesterases
PERMA_0549	SSF47240	Ferritin-like
PERMA_0551	SSF48168	R1 subunit of ribonucleotide reductase, N-terminal domain
PERMA_0551	SSF51998	PFL-like glycyl radical enzymes
PERMA_0553	SSF56935	Porins
PERMA_0555	SSF55931	Glutamine synthetase/guanido kinase
PERMA_0555	SSF89095	GatB/YqeY motif
PERMA_0556	SSF51735	NAD(P)-binding Rossmann-fold domains
PERMA_0556	SSF52283	Formate/glycerate dehydrogenase catalytic domain-like
PERMA_0558	SSF143975	IlvD/EDD N-terminal domain-like
PERMA_0558	SSF52016	LeuD/IlvD-like
PERMA_0559	SSF55973	S-adenosylmethionine synthetase
PERMA_0560	SSF51905	FAD/NAD(P)-binding domain
PERMA_0560	SSF55424	FAD/NAD-linked reductases, dimerisation (C-terminal) domain
PERMA_0567	SSF53067	Actin-like ATPase domain
PERMA_0568	SSF51621	Phosphoenolpyruvate/pyruvate domain
PERMA_0568	SSF52009	Phosphohistidine domain
PERMA_0568	SSF56059	Glutathione synthetase ATP-binding domain-like
PERMA_0569	SSF109604	HD-domain/PDEase-like
PERMA_0570	SSF55681	Class II aaRS and biotin synthetases
PERMA_0571	SSF55120	Pseudouridine synthase
PERMA_0572	SSF53955	Lysozyme-like
PERMA_0572	SSF56601	beta-lactamase/transpeptidase-like
PERMA_0573	SSF53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes
PERMA_0574	SSF102114	Radical SAM enzymes
PERMA_0575	SSF141868	EAL domain-like
PERMA_0575	SSF55073	Nucleotide cyclase
PERMA_0576	SSF50692	ADC-like
PERMA_0576	SSF53706	Formate dehydrogenase/DMSO reductase, domains 1-3
PERMA_0578	SSF56935	Porins
PERMA_0579	SSF53448	Nucleotide-diphospho-sugar transferases
PERMA_0581	SSF110399	ThiG-like
PERMA_0582	SSF56281	Metallo-hydrolase/oxidoreductase
PERMA_0584	SSF50486	FMT C-terminal domain-like
PERMA_0584	SSF53328	Formyltransferase
PERMA_0585	SSF55315	L30e-like
PERMA_0585	SSF75217	alpha/beta knot
PERMA_0586	SSF50022	ISP domain
PERMA_0587	SSF81342	Transmembrane di-heme cytochromes
PERMA_0587	SSF81648	a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
PERMA_0588	SSF46626	Cytochrome c
PERMA_0589	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
PERMA_0589	SSF51735	NAD(P)-binding Rossmann-fold domains
PERMA_0590	SSF53098	Ribonuclease H-like
PERMA_0592	SSF116726	TrkA C-terminal domain-like
PERMA_0592	SSF51735	NAD(P)-binding Rossmann-fold domains
PERMA_0594	SSF110997	Sporulation related repeat
PERMA_0595	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
PERMA_0595	SSF52374	Nucleotidylyl transferase
PERMA_0595	SSF55190	Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain
PERMA_0596	SSF52317	Class I glutamine amidotransferase-like
PERMA_0596	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PERMA_0597	SSF56801	Acetyl-CoA synthetase-like
PERMA_0598	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PERMA_0600	SSF54909	Dimeric alpha+beta barrel
PERMA_0604	SSF74982	Small protein B (SmpB)
PERMA_0605	SSF159501	EreA/ChaN-like
PERMA_0605	SSF50156	PDZ domain-like
PERMA_0605	SSF55486	Metalloproteases ("zincins"), catalytic domain
PERMA_0606	SSF48557	L-aspartase-like
PERMA_0607	SSF48150	DNA-glycosylase
PERMA_0609	SSF52402	Adenine nucleotide alpha hydrolases-like
PERMA_0609	SSF56317	Carbon-nitrogen hydrolase
PERMA_0610	SSF109604	HD-domain/PDEase-like
PERMA_0610	SSF141868	EAL domain-like
PERMA_0614	SSF109604	HD-domain/PDEase-like
PERMA_0614	SSF55021	ACT-like
PERMA_0614	SSF81271	TGS-like
PERMA_0614	SSF81301	Nucleotidyltransferase
PERMA_0617	SSF52490	Tubulin nucleotide-binding domain-like
PERMA_0617	SSF55307	Tubulin C-terminal domain-like
PERMA_0618	SSF53067	Actin-like ATPase domain
PERMA_0620	SSF52440	PreATP-grasp domain
PERMA_0620	SSF56059	Glutathione synthetase ATP-binding domain-like
PERMA_0621	SSF56176	FAD-binding/transporter-associated domain-like
PERMA_0621	SSF56194	Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase, MurB, C-terminal domain
PERMA_0622	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
PERMA_0624	SSF51984	MurCD N-terminal domain
PERMA_0624	SSF53244	MurD-like peptide ligases, peptide-binding domain
PERMA_0624	SSF53623	MurD-like peptide ligases, catalytic domain
PERMA_0625	SSF51230	Single hybrid motif
PERMA_0625	SSF51569	Aldolase
PERMA_0625	SSF89000	post-HMGL domain-like
PERMA_0627	SSF46548	alpha-helical ferredoxin
PERMA_0627	SSF51971	Nucleotide-binding domain
PERMA_0628	SSF53671	Aspartate/ornithine carbamoyltransferase
PERMA_0629	SSF53671	Aspartate/ornithine carbamoyltransferase
PERMA_0630	SSF141868	EAL domain-like
PERMA_0630	SSF55073	Nucleotide cyclase
PERMA_0630	SSF55785	PYP-like sensor domain (PAS domain)
PERMA_0631	SSF55120	Pseudouridine synthase
PERMA_0631	SSF88697	PUA domain-like
PERMA_0632	SSF53244	MurD-like peptide ligases, peptide-binding domain
PERMA_0632	SSF53623	MurD-like peptide ligases, catalytic domain
PERMA_0634	SSF56420	Peptide deformylase
PERMA_0635	SSF51366	Ribulose-phoshate binding barrel
PERMA_0636	SSF117916	Fe-S cluster assembly (FSCA) domain-like
PERMA_0638	SSF51338	Composite domain of metallo-dependent hydrolases
PERMA_0638	SSF51556	Metallo-dependent hydrolases
PERMA_0639	SSF51306	LexA/Signal peptidase
PERMA_0640	SSF50199	Staphylococcal nuclease
PERMA_0641	SSF52255	N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE)
PERMA_0642	SSF51395	FMN-linked oxidoreductases
PERMA_0642	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
PERMA_0642	SSF69336	Alpha subunit of glutamate synthase, C-terminal domain
PERMA_0643	SSF55120	Pseudouridine synthase
PERMA_0644	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PERMA_0644	SSF54814	Prokaryotic type KH domain (KH-domain type II)
PERMA_0645	SSF158791	MgtE N-terminal domain-like
PERMA_0645	SSF161093	MgtE membrane domain-like
PERMA_0645	SSF54631	CBS-domain pair
PERMA_0646	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
PERMA_0647	SSF53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes
PERMA_0648	SSF52151	FabD/lysophospholipase-like
PERMA_0648	SSF55048	Probable ACP-binding domain of malonyl-CoA ACP transacylase
PERMA_0649	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PERMA_0651	SSF117396	TM1631-like
PERMA_0652	SSF103084	Holliday junction resolvase RusA
PERMA_0653	SSF52821	Rhodanese/Cell cycle control phosphatase
PERMA_0656	SSF52821	Rhodanese/Cell cycle control phosphatase
PERMA_0657	SSF50692	ADC-like
PERMA_0657	SSF53706	Formate dehydrogenase/DMSO reductase, domains 1-3
PERMA_0658	SSF54862	4Fe-4S ferredoxins
PERMA_0659	SSF46626	Cytochrome c
PERMA_0661	SSF54862	4Fe-4S ferredoxins
PERMA_0663	SSF50692	ADC-like
PERMA_0663	SSF53706	Formate dehydrogenase/DMSO reductase, domains 1-3
PERMA_0664	SSF89155	TorD-like
PERMA_0665	SSF54862	4Fe-4S ferredoxins
PERMA_0666	SSF56935	Porins
PERMA_0667	SSF55718	SCP-like
PERMA_0670	SSF54197	HIT-like
PERMA_0673	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
PERMA_0674	SSF56519	Penicillin binding protein dimerisation domain
PERMA_0674	SSF56601	beta-lactamase/transpeptidase-like
PERMA_0676	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
PERMA_0676	SSF81799	Putative methyltransferase TM0872, insert domain
PERMA_0677	SSF56281	Metallo-hydrolase/oxidoreductase
PERMA_0679	SSF109998	Triger factor/SurA peptide-binding domain-like
PERMA_0680	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PERMA_0681	SSF111369	HlyD-like secretion proteins
PERMA_0682	SSF56954	Outer membrane efflux proteins (OEP)
PERMA_0684	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
PERMA_0684	SSF50677	ValRS/IleRS/LeuRS editing domain
PERMA_0684	SSF52374	Nucleotidylyl transferase
PERMA_0685	SSF47729	IHF-like DNA-binding proteins
PERMA_0686	SSF56784	HAD-like
PERMA_0689	SSF57662	Ferredoxin thioredoxin reductase (FTR), catalytic beta chain
PERMA_0690	SSF56762	HydB/Nqo4-like
PERMA_0692	SSF56770	HydA/Nqo6-like
PERMA_0693	SSF52343	Ferredoxin reductase-like, C-terminal NADP-linked domain
PERMA_0693	SSF63380	Riboflavin synthase domain-like
PERMA_0694	SSF46548	alpha-helical ferredoxin
PERMA_0695	SSF56770	HydA/Nqo6-like
PERMA_0696	SSF56762	HydB/Nqo4-like
PERMA_0697	SSF81342	Transmembrane di-heme cytochromes
PERMA_0699	SSF53300	vWA-like
PERMA_0701	SSF48452	TPR-like
PERMA_0701	SSF53300	vWA-like
PERMA_0702	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PERMA_0705	SSF54975	Acylphosphatase/BLUF domain-like
PERMA_0705	SSF55821	YrdC/RibB
PERMA_0706	SSF160544	EscU C-terminal domain-like
PERMA_0711	SSF101801	Surface presentation of antigens (SPOA)
PERMA_0713	SSF117143	Flagellar hook protein flgE
PERMA_0715	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PERMA_0721	SSF48452	TPR-like
PERMA_0723	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
PERMA_0723	SSF88946	Sigma2 domain of RNA polymerase sigma factors
PERMA_0724	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PERMA_0725	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PERMA_0730	SSF51269	AFP III-like domain
PERMA_0731	SSF117143	Flagellar hook protein flgE
PERMA_0732	SSF117143	Flagellar hook protein flgE
PERMA_0733	SSF101801	Surface presentation of antigens (SPOA)
PERMA_0734	SSF101801	Surface presentation of antigens (SPOA)
PERMA_0734	SSF103039	CheC-like
PERMA_0735	SSF48029	FliG
PERMA_0737	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
PERMA_0738	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
PERMA_0739	SSF52172	CheY-like
PERMA_0740	SSF50341	CheW-like
PERMA_0740	SSF52172	CheY-like
PERMA_0741	SSF50341	CheW-like
PERMA_0742	SSF47226	Histidine-containing phosphotransfer domain, HPT domain
PERMA_0742	SSF47384	Homodimeric domain of signal transducing histidine kinase
PERMA_0742	SSF50341	CheW-like
PERMA_0742	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
PERMA_0743	SSF75708	Chemotaxis phosphatase CheZ
PERMA_0744	SSF52172	CheY-like
PERMA_0744	SSF52738	Methylesterase CheB, C-terminal domain
PERMA_0745	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
PERMA_0750	SSF55073	Nucleotide cyclase
PERMA_0750	SSF55785	PYP-like sensor domain (PAS domain)
PERMA_0751	SSF100920	Heat shock protein 70kD (HSP70), peptide-binding domain
PERMA_0751	SSF100934	Heat shock protein 70kD (HSP70), C-terminal subdomain
PERMA_0751	SSF53067	Actin-like ATPase domain
PERMA_0753	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PERMA_0754	SSF55785	PYP-like sensor domain (PAS domain)
PERMA_0754	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
PERMA_0755	SSF54913	GlnB-like
PERMA_0756	SSF117892	Band 7/SPFH domain
PERMA_0757	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PERMA_0757	SSF81923	Double Clp-N motif
PERMA_0758	SSF48334	DNA repair protein MutS, domain III
PERMA_0758	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PERMA_0758	SSF53150	DNA repair protein MutS, domain II
PERMA_0758	SSF55271	DNA repair protein MutS, domain I
PERMA_0759	SSF51261	Duplicated hybrid motif
PERMA_0760	SSF102114	Radical SAM enzymes
PERMA_0761	SSF53901	Thiolase-like
PERMA_0762	SSF103256	Hypothetical protein TM0160
PERMA_0763	SSF53659	Isocitrate/Isopropylmalate dehydrogenase-like
PERMA_0764	SSF57829	Zn-binding ribosomal proteins
PERMA_0766	SSF53383	PLP-dependent transferases
PERMA_0767	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PERMA_0769	SSF51735	NAD(P)-binding Rossmann-fold domains
PERMA_0773	SSF82784	OsmC-like
PERMA_0774	SSF117892	Band 7/SPFH domain
PERMA_0777	SSF46600	C-terminal UvrC-binding domain of UvrB
PERMA_0777	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PERMA_0778	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
PERMA_0779	SSF53448	Nucleotide-diphospho-sugar transferases
PERMA_0780	SSF53448	Nucleotide-diphospho-sugar transferases
PERMA_0781	SSF102114	Radical SAM enzymes
PERMA_0782	SSF53790	Tetrapyrrole methylase
PERMA_0784	SSF50677	ValRS/IleRS/LeuRS editing domain
PERMA_0784	SSF52374	Nucleotidylyl transferase
PERMA_0785	SSF46785	"Winged helix" DNA-binding domain
PERMA_0785	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PERMA_0786	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
PERMA_0786	SSF52374	Nucleotidylyl transferase
PERMA_0788	SSF52402	Adenine nucleotide alpha hydrolases-like
PERMA_0790	SSF51905	FAD/NAD(P)-binding domain
PERMA_0792	SSF56935	Porins
PERMA_0793	SSF55073	Nucleotide cyclase
PERMA_0794	SSF55144	LigT-like
PERMA_0796	SSF47384	Homodimeric domain of signal transducing histidine kinase
PERMA_0796	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
PERMA_0797	SSF46689	Homeodomain-like
PERMA_0797	SSF52172	CheY-like
PERMA_0797	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PERMA_0798	SSF110997	Sporulation related repeat
PERMA_0798	SSF81901	HCP-like
PERMA_0799	SSF53448	Nucleotide-diphospho-sugar transferases
PERMA_0802	SSF46689	Homeodomain-like
PERMA_0803	SSF56954	Outer membrane efflux proteins (OEP)
PERMA_0804	SSF111369	HlyD-like secretion proteins
PERMA_0805	SSF103473	MFS general substrate transporter
PERMA_0807	SSF50182	Sm-like ribonucleoproteins
PERMA_0807	SSF82689	Mechanosensitive channel protein MscS (YggB), C-terminal domain
PERMA_0807	SSF82861	Mechanosensitive channel protein MscS (YggB), transmembrane region
PERMA_0808	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PERMA_0809	SSF52788	Phosphotyrosine protein phosphatases I
PERMA_0812	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PERMA_0813	SSF109709	KorB DNA-binding domain-like
PERMA_0813	SSF110849	ParB/Sulfiredoxin
PERMA_0814	SSF54523	Pili subunits
PERMA_0817	SSF158544	GspK insert domain-like
PERMA_0817	SSF54523	Pili subunits
PERMA_0817	SSF81585	PsbU/PolX domain-like
PERMA_0819	SSF103054	General secretion pathway protein M, EpsM
PERMA_0821	SSF52743	Subtilisin-like
PERMA_0822	SSF50156	PDZ domain-like
PERMA_0824	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PERMA_0825	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
PERMA_0827	SSF57802	Rubredoxin-like
PERMA_0829	SSF56784	HAD-like
PERMA_0834	SSF46785	"Winged helix" DNA-binding domain
PERMA_0834	SSF55781	GAF domain-like
PERMA_0835	SSF56935	Porins
PERMA_0836	SSF56801	Acetyl-CoA synthetase-like
PERMA_0839	SSF51206	cAMP-binding domain-like
PERMA_0839	SSF54631	CBS-domain pair
PERMA_0840	SSF53098	Ribonuclease H-like
PERMA_0841	SSF46785	"Winged helix" DNA-binding domain
PERMA_0841	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PERMA_0845	SSF54975	Acylphosphatase/BLUF domain-like
PERMA_0845	SSF55821	YrdC/RibB
PERMA_0846	SSF50182	Sm-like ribonucleoproteins
PERMA_0846	SSF82689	Mechanosensitive channel protein MscS (YggB), C-terminal domain
PERMA_0846	SSF82861	Mechanosensitive channel protein MscS (YggB), transmembrane region
PERMA_0847	SSF103365	Hypothetical protein PH1602
PERMA_0850	SSF46785	"Winged helix" DNA-binding domain
PERMA_0852	SSF56954	Outer membrane efflux proteins (OEP)
PERMA_0853	SSF111369	HlyD-like secretion proteins
PERMA_0854	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
PERMA_0854	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
PERMA_0854	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
PERMA_0856	SSF102114	Radical SAM enzymes
PERMA_0857	SSF49299	PKD domain
PERMA_0857	SSF54001	Cysteine proteinases
PERMA_0858	SSF48108	Carbamoyl phosphate synthetase, large subunit connection domain
PERMA_0858	SSF52440	PreATP-grasp domain
PERMA_0858	SSF56059	Glutathione synthetase ATP-binding domain-like
PERMA_0859	SSF48168	R1 subunit of ribonucleotide reductase, N-terminal domain
PERMA_0859	SSF51998	PFL-like glycyl radical enzymes
PERMA_0860	SSF46689	Homeodomain-like
PERMA_0860	SSF48498	Tetracyclin repressor-like, C-terminal domain
PERMA_0861	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PERMA_0862	SSF48695	Multiheme cytochromes
PERMA_0863	SSF52507	Homo-oligomeric flavin-containing Cys decarboxylases, HFCD
PERMA_0864	SSF51366	Ribulose-phoshate binding barrel
PERMA_0865	SSF56349	DNA breaking-rejoining enzymes
PERMA_0866	SSF110455	Toprim domain
PERMA_0867	SSF52172	CheY-like
PERMA_0868	SSF53850	Periplasmic binding protein-like II
PERMA_0869	SSF55120	Pseudouridine synthase
PERMA_0869	SSF55174	Alpha-L RNA-binding motif
PERMA_0870	SSF53474	alpha/beta-Hydrolases
PERMA_0871	SSF102114	Radical SAM enzymes
PERMA_0872	SSF160240	Cation efflux protein cytoplasmic domain-like
PERMA_0872	SSF161111	Cation efflux protein transmembrane domain-like
PERMA_0874	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PERMA_0875	SSF55120	Pseudouridine synthase
PERMA_0875	SSF55174	Alpha-L RNA-binding motif
PERMA_0877	SSF56954	Outer membrane efflux proteins (OEP)
PERMA_0878	SSF111369	HlyD-like secretion proteins
PERMA_0879	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
PERMA_0879	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
PERMA_0879	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
PERMA_0883	SSF56059	Glutathione synthetase ATP-binding domain-like
PERMA_0884	SSF50621	Alanine racemase C-terminal domain-like
PERMA_0884	SSF51419	PLP-binding barrel
PERMA_0885	SSF51261	Duplicated hybrid motif
PERMA_0887	SSF48452	TPR-like
PERMA_0888	SSF50692	ADC-like
PERMA_0888	SSF53706	Formate dehydrogenase/DMSO reductase, domains 1-3
PERMA_0889	SSF110857	Gamma-glutamyl cyclotransferase-like
PERMA_0890	SSF103473	MFS general substrate transporter
PERMA_0891	SSF55124	Nitrite/Sulfite reductase N-terminal domain-like
PERMA_0891	SSF56014	Nitrite and sulphite reductase 4Fe-4S domain-like
PERMA_0891	SSF56112	Protein kinase-like (PK-like)
PERMA_0892	SSF52317	Class I glutamine amidotransferase-like
PERMA_0893	SSF51735	NAD(P)-binding Rossmann-fold domains
PERMA_0893	SSF75615	Siroheme synthase middle domains-like
PERMA_0894	SSF49777	PEBP-like
PERMA_0895	SSF49777	PEBP-like
PERMA_0896	SSF53639	AraD/HMP-PK domain-like
PERMA_0898	SSF52833	Thioredoxin-like
PERMA_0900	SSF47757	Chemotaxis receptor methyltransferase CheR, N-terminal domain
PERMA_0900	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
PERMA_0901	SSF53383	PLP-dependent transferases
PERMA_0903	SSF51294	Hedgehog/intein (Hint) domain
PERMA_0903	SSF55608	Homing endonucleases
PERMA_0903	SSF89550	PHP domain-like
PERMA_0904	SSF55620	Tetrahydrobiopterin biosynthesis enzymes-like
PERMA_0905	SSF51735	NAD(P)-binding Rossmann-fold domains
PERMA_0907	SSF102114	Radical SAM enzymes
PERMA_0908	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PERMA_0909	SSF48295	TrpR-like
PERMA_0909	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PERMA_0911	SSF51569	Aldolase
PERMA_0912	SSF51261	Duplicated hybrid motif
PERMA_0913	SSF110921	2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain
PERMA_0913	SSF51569	Aldolase
PERMA_0914	SSF56762	HydB/Nqo4-like
PERMA_0915	SSF56770	HydA/Nqo6-like
PERMA_0916	SSF46689	Homeodomain-like
PERMA_0917	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
PERMA_0918	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PERMA_0919	SSF47598	Ribbon-helix-helix
PERMA_0919	SSF55021	ACT-like
PERMA_0920	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PERMA_0921	SSF46548	alpha-helical ferredoxin
PERMA_0923	SSF46689	Homeodomain-like
PERMA_0923	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PERMA_0925	SSF50447	Translation proteins
PERMA_0925	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PERMA_0925	SSF54980	EF-G C-terminal domain-like
PERMA_0927	SSF46600	C-terminal UvrC-binding domain of UvrB
PERMA_0927	SSF47781	RuvA domain 2-like
PERMA_0927	SSF82771	GIY-YIG endonuclease
PERMA_0928	SSF55785	PYP-like sensor domain (PAS domain)
PERMA_0928	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
PERMA_0929	SSF56784	HAD-like
PERMA_0932	SSF55073	Nucleotide cyclase
PERMA_0933	SSF53167	Purine and uridine phosphorylases
PERMA_0934	SSF50447	Translation proteins
PERMA_0934	SSF51366	Ribulose-phoshate binding barrel
PERMA_0935	SSF56300	Metallo-dependent phosphatases
PERMA_0936	SSF51366	Ribulose-phoshate binding barrel
PERMA_0937	SSF49299	PKD domain
PERMA_0937	SSF55486	Metalloproteases ("zincins"), catalytic domain
PERMA_0938	SSF53807	"Helical backbone" metal receptor
PERMA_0939	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PERMA_0940	SSF51690	Nicotinate/Quinolinate PRTase C-terminal domain-like
PERMA_0940	SSF54675	Nicotinate/Quinolinate PRTase N-terminal domain-like
PERMA_0941	SSF51984	MurCD N-terminal domain
PERMA_0941	SSF53244	MurD-like peptide ligases, peptide-binding domain
PERMA_0941	SSF53623	MurD-like peptide ligases, catalytic domain
PERMA_0944	SSF88713	Glycoside hydrolase/deacetylase
PERMA_0946	SSF51726	UROD/MetE-like
PERMA_0947	SSF46626	Cytochrome c
PERMA_0949	SSF46626	Cytochrome c
PERMA_0951	SSF47384	Homodimeric domain of signal transducing histidine kinase
PERMA_0951	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
PERMA_0952	SSF46894	C-terminal effector domain of the bipartite response regulators
PERMA_0952	SSF52172	CheY-like
PERMA_0954	SSF54631	CBS-domain pair
PERMA_0954	SSF64182	DHH phosphoesterases
PERMA_0954	SSF81301	Nucleotidyltransferase
PERMA_0954	SSF81891	Poly A polymerase C-terminal region-like
PERMA_0956	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
PERMA_0958	SSF53738	Phosphoglucomutase, first 3 domains
PERMA_0958	SSF55957	Phosphoglucomutase, C-terminal domain
PERMA_0959	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
PERMA_0959	SSF50249	Nucleic acid-binding proteins
PERMA_0959	SSF52374	Nucleotidylyl transferase
PERMA_0960	SSF52833	Thioredoxin-like
PERMA_0961	SSF140490	Nqo1C-terminal domain-like
PERMA_0961	SSF142019	Nqo1 FMN-binding domain-like
PERMA_0961	SSF142984	Nqo1 middle domain-like
PERMA_0962	SSF48113	Heme-dependent peroxidases
PERMA_0963	SSF53383	PLP-dependent transferases
PERMA_0964	SSF51905	FAD/NAD(P)-binding domain
PERMA_0964	SSF54373	FAD-linked reductases, C-terminal domain
PERMA_0965	SSF56281	Metallo-hydrolase/oxidoreductase
PERMA_0966	SSF51735	NAD(P)-binding Rossmann-fold domains
PERMA_0967	SSF110997	Sporulation related repeat
PERMA_0968	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PERMA_0969	SSF55073	Nucleotide cyclase
PERMA_0970	SSF54523	Pili subunits
PERMA_0971	SSF48452	TPR-like
PERMA_0976	SSF54523	Pili subunits
PERMA_0977	SSF160246	EspE N-terminal domain-like
PERMA_0977	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PERMA_0979	SSF46565	Chaperone J-domain
PERMA_0979	SSF49493	HSP40/DnaJ peptide-binding domain
PERMA_0979	SSF57938	DnaJ/Hsp40 cysteine-rich domain
PERMA_0980	SSF52151	FabD/lysophospholipase-like
PERMA_0981	SSF51064	Head domain of nucleotide exchange factor GrpE
PERMA_0981	SSF58014	Coiled-coil domain of nucleotide exchange factor GrpE
PERMA_0984	SSF56300	Metallo-dependent phosphatases
PERMA_0985	SSF51430	NAD(P)-linked oxidoreductase
PERMA_0986	SSF109604	HD-domain/PDEase-like
PERMA_0986	SSF55781	GAF domain-like
PERMA_0988	SSF55073	Nucleotide cyclase
PERMA_0989	SSF141868	EAL domain-like
PERMA_0989	SSF55073	Nucleotide cyclase
PERMA_0990	SSF56281	Metallo-hydrolase/oxidoreductase
PERMA_0991	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PERMA_0991	SSF90123	ABC transporter transmembrane region
PERMA_0992	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PERMA_0993	SSF56935	Porins
PERMA_0995	SSF53681	Aspartate/glutamate racemase
PERMA_0996	SSF81301	Nucleotidyltransferase
PERMA_0997	SSF48452	TPR-like
PERMA_0998	SSF50249	Nucleic acid-binding proteins
PERMA_0999	SSF54862	4Fe-4S ferredoxins
PERMA_1000	SSF50978	WD40 repeat-like
PERMA_1001	SSF53271	PRTase-like
PERMA_1001	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
PERMA_1003	SSF53092	Creatinase/prolidase N-terminal domain
PERMA_1003	SSF55920	Creatinase/aminopeptidase
PERMA_1004	SSF141868	EAL domain-like
PERMA_1004	SSF55073	Nucleotide cyclase
PERMA_1005	SSF141371	PilZ domain-like
PERMA_1006	SSF55469	FMN-dependent nitroreductase-like
PERMA_1008	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
PERMA_1009	SSF53098	Ribonuclease H-like
PERMA_1010	SSF159127	HupF/HypC-like
PERMA_1012	SSF88723	PIN domain-like
PERMA_1014	SSF56784	HAD-like
PERMA_1014	SSF81653	Calcium ATPase, transduction domain A
PERMA_1014	SSF81665	Calcium ATPase, transmembrane domain M
PERMA_1016	SSF55326	PurM N-terminal domain-like
PERMA_1016	SSF56042	PurM C-terminal domain-like
PERMA_1017	SSF53163	HybD-like
PERMA_1018	SSF54506	Diaminopimelate epimerase-like
PERMA_1020	SSF55681	Class II aaRS and biotin synthetases
PERMA_1021	SSF46785	"Winged helix" DNA-binding domain
PERMA_1023	SSF102712	JAB1/MPN domain
PERMA_1024	SSF50249	Nucleic acid-binding proteins
PERMA_1025	SSF55120	Pseudouridine synthase
PERMA_1025	SSF55174	Alpha-L RNA-binding motif
PERMA_1038	SSF161098	MetI-like
PERMA_1039	SSF161098	MetI-like
PERMA_1040	SSF48256	Citrate synthase
PERMA_1042	SSF158472	HAMP domain-like
PERMA_1042	SSF47384	Homodimeric domain of signal transducing histidine kinase
PERMA_1042	SSF55785	PYP-like sensor domain (PAS domain)
PERMA_1042	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
PERMA_1043	SSF75217	alpha/beta knot
PERMA_1046	SSF51351	Triosephosphate isomerase (TIM)
PERMA_1047	SSF53254	Phosphoglycerate mutase-like
PERMA_1049	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
PERMA_1050	SSF51344	Epsilon subunit of F1F0-ATP synthase N-terminal domain
PERMA_1051	SSF52317	Class I glutamine amidotransferase-like
PERMA_1053	SSF51283	dUTPase-like
PERMA_1054	SSF51735	NAD(P)-binding Rossmann-fold domains
PERMA_1054	SSF55021	ACT-like
PERMA_1054	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
PERMA_1056	SSF55811	Nudix
PERMA_1058	SSF53383	PLP-dependent transferases
PERMA_1059	SSF54427	NTF2-like
PERMA_1062	SSF47113	Histone-fold
PERMA_1064	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PERMA_1065	SSF53383	PLP-dependent transferases
PERMA_1066	SSF46785	"Winged helix" DNA-binding domain
PERMA_1067	SSF82649	SufE/NifU
PERMA_1068	SSF52402	Adenine nucleotide alpha hydrolases-like
PERMA_1069	SSF64307	SirA-like
PERMA_1070	SSF140683	SP0561-like
PERMA_1071	SSF117916	Fe-S cluster assembly (FSCA) domain-like
PERMA_1072	SSF51735	NAD(P)-binding Rossmann-fold domains
PERMA_1072	SSF53223	Aminoacid dehydrogenase-like, N-terminal domain
PERMA_1073	SSF111038	YjbQ-like
PERMA_1075	SSF53633	Carbamate kinase-like
PERMA_1075	SSF88697	PUA domain-like
PERMA_1076	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
PERMA_1078	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
PERMA_1078	SSF51735	NAD(P)-binding Rossmann-fold domains
PERMA_1079	SSF110921	2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain
PERMA_1079	SSF51569	Aldolase
PERMA_1080	SSF55326	PurM N-terminal domain-like
PERMA_1080	SSF56042	PurM C-terminal domain-like
PERMA_1081	SSF53474	alpha/beta-Hydrolases
PERMA_1082	SSF50104	Translation proteins SH3-like domain
PERMA_1082	SSF50249	Nucleic acid-binding proteins
PERMA_1083	SSF51230	Single hybrid motif
PERMA_1084	SSF51735	NAD(P)-binding Rossmann-fold domains
PERMA_1085	SSF54211	Ribosomal protein S5 domain 2-like
PERMA_1085	SSF55060	GHMP Kinase, C-terminal domain
PERMA_1086	SSF141259	CarD-like
PERMA_1086	SSF143517	TRCF domain-like
PERMA_1086	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PERMA_1087	SSF52218	Flavoproteins
PERMA_1089	SSF53955	Lysozyme-like
PERMA_1089	SSF54106	LysM domain
PERMA_1091	SSF102114	Radical SAM enzymes
PERMA_1092	SSF102645	CoaB-like
PERMA_1092	SSF52507	Homo-oligomeric flavin-containing Cys decarboxylases, HFCD
PERMA_1093	SSF116726	TrkA C-terminal domain-like
PERMA_1095	SSF55681	Class II aaRS and biotin synthetases
PERMA_1096	SSF51735	NAD(P)-binding Rossmann-fold domains
PERMA_1096	SSF81324	Voltage-gated potassium channels
PERMA_1097	SSF54211	Ribosomal protein S5 domain 2-like
PERMA_1098	SSF69618	HemD-like
PERMA_1100	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PERMA_1102	SSF52833	Thioredoxin-like
PERMA_1102	SSF54423	DsbC/DsbG N-terminal domain-like
PERMA_1103	SSF89623	Ribose/Galactose isomerase RpiB/AlsB
PERMA_1104	SSF53383	PLP-dependent transferases
PERMA_1105	SSF111331	NAD kinase/diacylglycerol kinase-like
PERMA_1106	SSF69765	IpsF-like
PERMA_1107	SSF140683	SP0561-like
PERMA_1109	SSF50249	Nucleic acid-binding proteins
PERMA_1109	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PERMA_1110	SSF141868	EAL domain-like
PERMA_1110	SSF55073	Nucleotide cyclase
PERMA_1110	SSF55785	PYP-like sensor domain (PAS domain)
PERMA_1111	SSF54001	Cysteine proteinases
PERMA_1112	SSF55073	Nucleotide cyclase
PERMA_1112	SSF55785	PYP-like sensor domain (PAS domain)
PERMA_1114	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PERMA_1115	SSF52374	Nucleotidylyl transferase
PERMA_1118	SSF53383	PLP-dependent transferases
PERMA_1119	SSF141868	EAL domain-like
PERMA_1119	SSF55073	Nucleotide cyclase
PERMA_1119	SSF55785	PYP-like sensor domain (PAS domain)
PERMA_1120	SSF53218	Molybdenum cofactor biosynthesis proteins
PERMA_1120	SSF63867	MoeA C-terminal domain-like
PERMA_1120	SSF63882	MoeA N-terminal region -like
PERMA_1121	SSF52335	Methylglyoxal synthase-like
PERMA_1121	SSF52440	PreATP-grasp domain
PERMA_1121	SSF56059	Glutathione synthetase ATP-binding domain-like
PERMA_1123	SSF51391	Thiamin phosphate synthase
PERMA_1124	SSF158997	Trm112p-like
PERMA_1125	SSF53850	Periplasmic binding protein-like II
PERMA_1126	SSF55073	Nucleotide cyclase
PERMA_1127	SSF158791	MgtE N-terminal domain-like
PERMA_1129	SSF69118	AhpD-like
PERMA_1130	SSF51735	NAD(P)-binding Rossmann-fold domains
PERMA_1130	SSF56327	LDH C-terminal domain-like
PERMA_1132	SSF117457	FumA C-terminal domain-like
PERMA_1133	SSF52210	Succinyl-CoA synthetase domains
PERMA_1133	SSF56059	Glutathione synthetase ATP-binding domain-like
PERMA_1134	SSF51735	NAD(P)-binding Rossmann-fold domains
PERMA_1134	SSF52210	Succinyl-CoA synthetase domains
PERMA_1135	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
PERMA_1135	SSF52922	TK C-terminal domain-like
PERMA_1135	SSF53323	Pyruvate-ferredoxin oxidoreductase, PFOR, domain III
PERMA_1136	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
PERMA_1145	SSF56784	HAD-like
PERMA_1145	SSF81653	Calcium ATPase, transduction domain A
PERMA_1145	SSF81665	Calcium ATPase, transmembrane domain M
PERMA_1146	SSF52821	Rhodanese/Cell cycle control phosphatase
PERMA_1147	SSF141571	Pentapeptide repeat-like
PERMA_1148	SSF54523	Pili subunits
PERMA_1149	SSF54523	Pili subunits
PERMA_1153	SSF54523	Pili subunits
PERMA_1154	SSF53300	vWA-like
PERMA_1156	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
PERMA_1157	SSF46894	C-terminal effector domain of the bipartite response regulators
PERMA_1157	SSF52172	CheY-like
PERMA_1158	SSF53254	Phosphoglycerate mutase-like
PERMA_1159	SSF53448	Nucleotide-diphospho-sugar transferases
PERMA_1160	SSF55729	Acyl-CoA N-acyltransferases (Nat)
PERMA_1161	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PERMA_1161	SSF54211	Ribosomal protein S5 domain 2-like
PERMA_1161	SSF88697	PUA domain-like
PERMA_1162	SSF49764	HSP20-like chaperones
PERMA_1163	SSF75217	alpha/beta knot
PERMA_1165	SSF111384	OmpH-like
PERMA_1166	SSF101852	Bacterial fluorinating enzyme, C-terminal domain
PERMA_1166	SSF102522	Bacterial fluorinating enzyme, N-terminal domain
PERMA_1167	SSF47336	ACP-like
PERMA_1167	SSF56801	Acetyl-CoA synthetase-like
PERMA_1167	SSF69593	Glycerol-3-phosphate (1)-acyltransferase
PERMA_1174	SSF52833	Thioredoxin-like
PERMA_1175	SSF53474	alpha/beta-Hydrolases
PERMA_1180	SSF50447	Translation proteins
PERMA_1180	SSF50465	EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
PERMA_1180	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PERMA_1181	SSF57829	Zn-binding ribosomal proteins
PERMA_1184	SSF50104	Translation proteins SH3-like domain
PERMA_1184	SSF82004	N-utilization substance G protein NusG, insert domain
PERMA_1184	SSF82679	N-utilization substance G protein NusG, N-terminal domain
PERMA_1185	SSF46906	Ribosomal protein L11, C-terminal domain
PERMA_1185	SSF54747	Ribosomal L11/L12e N-terminal domain
PERMA_1186	SSF56808	Ribosomal protein L1
PERMA_1187	SSF160369	Ribosomal protein L10-like
PERMA_1188	SSF48300	Ribosomal protein L7/12, oligomerisation (N-terminal) domain
PERMA_1188	SSF54736	ClpS-like
PERMA_1189	SSF64484	beta and beta-prime subunits of DNA dependent RNA-polymerase
PERMA_1190	SSF64484	beta and beta-prime subunits of DNA dependent RNA-polymerase
PERMA_1191	SSF50249	Nucleic acid-binding proteins
PERMA_1192	SSF47973	Ribosomal protein S7
PERMA_1193	SSF50447	Translation proteins
PERMA_1193	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PERMA_1193	SSF54211	Ribosomal protein S5 domain 2-like
PERMA_1193	SSF54980	EF-G C-terminal domain-like
PERMA_1194	SSF50447	Translation proteins
PERMA_1194	SSF50465	EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
PERMA_1194	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PERMA_1195	SSF54999	Ribosomal protein S10
PERMA_1196	SSF50447	Translation proteins
PERMA_1197	SSF52166	Ribosomal protein L4
PERMA_1198	SSF54189	Ribosomal proteins S24e, L23 and L15e
PERMA_1199	SSF50104	Translation proteins SH3-like domain
PERMA_1199	SSF50249	Nucleic acid-binding proteins
PERMA_1200	SSF54570	Ribosomal protein S19
PERMA_1201	SSF54843	Ribosomal protein L22
PERMA_1202	SSF54814	Prokaryotic type KH domain (KH-domain type II)
PERMA_1202	SSF54821	Ribosomal protein S3 C-terminal domain
PERMA_1203	SSF54686	Ribosomal protein L16p/L10e
PERMA_1204	SSF46561	Ribosomal protein L29 (L29p)
PERMA_1205	SSF50249	Nucleic acid-binding proteins
PERMA_1206	SSF50193	Ribosomal protein L14
PERMA_1207	SSF50104	Translation proteins SH3-like domain
PERMA_1208	SSF55282	RL5-like
PERMA_1209	SSF57716	Glucocorticoid receptor-like (DNA-binding domain)
PERMA_1210	SSF56047	Ribosomal protein S8
PERMA_1211	SSF56053	Ribosomal protein L6
PERMA_1212	SSF53137	Translational machinery components
PERMA_1213	SSF54211	Ribosomal protein S5 domain 2-like
PERMA_1213	SSF54768	dsRNA-binding domain-like
PERMA_1214	SSF55129	Ribosomal protein L30p/L7e
PERMA_1215	SSF52080	Ribosomal proteins L15p and L18e
PERMA_1216	SSF103491	Preprotein translocase SecY subunit
PERMA_1217	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PERMA_1217	SSF57774	Microbial and mitochondrial ADK, insert "zinc finger" domain
PERMA_1218	SSF55920	Creatinase/aminopeptidase
PERMA_1219	SSF50249	Nucleic acid-binding proteins
PERMA_1220	SSF57840	Ribosomal protein L36
PERMA_1221	SSF46946	S13-like H2TH domain
PERMA_1222	SSF53137	Translational machinery components
PERMA_1223	SSF55174	Alpha-L RNA-binding motif
PERMA_1224	SSF47789	C-terminal domain of RNA polymerase alpha subunit
PERMA_1224	SSF55257	RBP11-like subunits of RNA polymerase
PERMA_1224	SSF56553	Insert subdomain of RNA polymerase alpha subunit
PERMA_1225	SSF64263	Prokaryotic ribosomal protein L17
PERMA_1229	SSF56752	D-aminoacid aminotransferase-like PLP-dependent enzymes
PERMA_1230	SSF53383	PLP-dependent transferases
PERMA_1232	SSF81606	PP2C-like
PERMA_1233	SSF51735	NAD(P)-binding Rossmann-fold domains
PERMA_1233	SSF52283	Formate/glycerate dehydrogenase catalytic domain-like
PERMA_1235	SSF141868	EAL domain-like
PERMA_1235	SSF158472	HAMP domain-like
PERMA_1235	SSF55073	Nucleotide cyclase
PERMA_1236	SSF53850	Periplasmic binding protein-like II
PERMA_1237	SSF82649	SufE/NifU
PERMA_1238	SSF46785	"Winged helix" DNA-binding domain
PERMA_1238	SSF55681	Class II aaRS and biotin synthetases
PERMA_1239	SSF47648	Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain
PERMA_1239	SSF52418	Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain
PERMA_1240	SSF50447	Translation proteins
PERMA_1240	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PERMA_1240	SSF54980	EF-G C-terminal domain-like
PERMA_1241	SSF52833	Thioredoxin-like
PERMA_1244	SSF51182	RmlC-like cupins
PERMA_1246	SSF89392	Prokaryotic lipoproteins and lipoprotein localization factors
PERMA_1247	SSF48452	TPR-like
PERMA_1247	SSF52833	Thioredoxin-like
PERMA_1248	SSF52402	Adenine nucleotide alpha hydrolases-like
PERMA_1249	SSF54285	MoaD/ThiS
PERMA_1250	SSF53187	Zn-dependent exopeptidases
PERMA_1251	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
PERMA_1252	SSF52440	PreATP-grasp domain
PERMA_1252	SSF56059	Glutathione synthetase ATP-binding domain-like
PERMA_1253	SSF55811	Nudix
PERMA_1254	SSF46626	Cytochrome c
PERMA_1255	SSF46785	"Winged helix" DNA-binding domain
PERMA_1255	SSF51206	cAMP-binding domain-like
PERMA_1256	SSF46626	Cytochrome c
PERMA_1257	SSF49503	Cupredoxins
PERMA_1257	SSF50974	Nitrous oxide reductase, N-terminal domain
PERMA_1259	SSF160387	NosL/MerB-like
PERMA_1260	SSF51126	Pectin lyase-like
PERMA_1261	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PERMA_1263	SSF46626	Cytochrome c
PERMA_1264	SSF110087	DR1885-like metal-binding protein
PERMA_1265	SSF52833	Thioredoxin-like
PERMA_1266	SSF56935	Porins
PERMA_1267	SSF55073	Nucleotide cyclase
PERMA_1268	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PERMA_1270	SSF54631	CBS-domain pair
PERMA_1270	SSF81340	Clc chloride channel
PERMA_1272	SSF116726	TrkA C-terminal domain-like
PERMA_1272	SSF51735	NAD(P)-binding Rossmann-fold domains
PERMA_1273	SSF102114	Radical SAM enzymes
PERMA_1278	SSF143631	ApbE-like
PERMA_1280	SSF56935	Porins
PERMA_1281	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
PERMA_1281	SSF51735	NAD(P)-binding Rossmann-fold domains
PERMA_1283	SSF52402	Adenine nucleotide alpha hydrolases-like
PERMA_1284	SSF160240	Cation efflux protein cytoplasmic domain-like
PERMA_1284	SSF161111	Cation efflux protein transmembrane domain-like
PERMA_1285	SSF52021	Carbamoyl phosphate synthetase, small subunit N-terminal domain
PERMA_1285	SSF52317	Class I glutamine amidotransferase-like
PERMA_1286	SSF54211	Ribosomal protein S5 domain 2-like
PERMA_1286	SSF55060	GHMP Kinase, C-terminal domain
PERMA_1288	SSF53271	PRTase-like
PERMA_1289	SSF50715	Ribosomal protein L25-like
PERMA_1290	SSF53178	Peptidyl-tRNA hydrolase-like
PERMA_1291	SSF54995	Ribosomal protein S6
PERMA_1292	SSF50249	Nucleic acid-binding proteins
PERMA_1293	SSF46911	Ribosomal protein S18
PERMA_1294	SSF55653	Ribosomal protein L9 C-domain
PERMA_1294	SSF55658	L9 N-domain-like
PERMA_1295	SSF48024	N-terminal domain of DnaB helicase
PERMA_1295	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PERMA_1298	SSF53784	Phosphofructokinase
PERMA_1299	SSF160537	SpoVG-like
PERMA_1302	SSF56317	Carbon-nitrogen hydrolase
PERMA_1307	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PERMA_1308	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PERMA_1309	SSF116734	DNA methylase specificity domain
PERMA_1311	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
PERMA_1313	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PERMA_1314	SSF46689	Homeodomain-like
PERMA_1314	SSF53098	Ribonuclease H-like
PERMA_1319	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PERMA_1320	SSF102114	Radical SAM enzymes
PERMA_1323	SSF102735	Trigger factor ribosome-binding domain
PERMA_1323	SSF109998	Triger factor/SurA peptide-binding domain-like
PERMA_1323	SSF54534	FKBP-like
PERMA_1324	SSF52096	ClpP/crotonase
PERMA_1325	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PERMA_1325	SSF57716	Glucocorticoid receptor-like (DNA-binding domain)
PERMA_1326	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PERMA_1327	SSF51366	Ribulose-phoshate binding barrel
PERMA_1328	SSF52317	Class I glutamine amidotransferase-like
PERMA_1329	SSF102114	Radical SAM enzymes
PERMA_1331	SSF56935	Porins
PERMA_1332	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PERMA_1336	SSF143120	YefM-like
PERMA_1338	SSF109604	HD-domain/PDEase-like
PERMA_1338	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PERMA_1339	SSF81301	Nucleotidyltransferase
PERMA_1341	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PERMA_1344	SSF143430	TTP0101/SSO1404-like
PERMA_1349	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
PERMA_1351	SSF47240	Ferritin-like
PERMA_1352	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
PERMA_1354	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
PERMA_1355	SSF102114	Radical SAM enzymes
PERMA_1356	SSF48452	TPR-like
PERMA_1357	SSF51735	NAD(P)-binding Rossmann-fold domains
PERMA_1358	SSF51445	(Trans)glycosidases
PERMA_1360	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
PERMA_1361	SSF48452	TPR-like
PERMA_1362	SSF103473	MFS general substrate transporter
PERMA_1364	SSF56281	Metallo-hydrolase/oxidoreductase
PERMA_1365	SSF101386	all-alpha NTP pyrophosphatases
PERMA_1366	SSF53271	PRTase-like
PERMA_1368	SSF51735	NAD(P)-binding Rossmann-fold domains
PERMA_1370	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PERMA_1370	SSF54427	NTF2-like
PERMA_1371	SSF141523	L,D-transpeptidase catalytic domain-like
PERMA_1371	SSF54427	NTF2-like
PERMA_1372	SSF53474	alpha/beta-Hydrolases
PERMA_1373	SSF53187	Zn-dependent exopeptidases
PERMA_1380	SSF64167	SurE-like
PERMA_1382	SSF47729	IHF-like DNA-binding proteins
PERMA_1383	SSF51161	Trimeric LpxA-like enzymes
PERMA_1385	SSF55620	Tetrahydrobiopterin biosynthesis enzymes-like
PERMA_1386	SSF52343	Ferredoxin reductase-like, C-terminal NADP-linked domain
PERMA_1386	SSF63380	Riboflavin synthase domain-like
PERMA_1387	SSF46977	Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain
PERMA_1387	SSF51905	FAD/NAD(P)-binding domain
PERMA_1387	SSF56425	Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain
PERMA_1388	SSF51246	Rudiment single hybrid motif
PERMA_1388	SSF52440	PreATP-grasp domain
PERMA_1388	SSF56059	Glutathione synthetase ATP-binding domain-like
PERMA_1389	SSF50621	Alanine racemase C-terminal domain-like
PERMA_1389	SSF51419	PLP-binding barrel
PERMA_1390	SSF63848	Cell-division inhibitor MinC, C-terminal domain
PERMA_1391	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PERMA_1392	SSF55229	Cell division protein MinE topological specificity domain
PERMA_1393	SSF53850	Periplasmic binding protein-like II
PERMA_1394	SSF51161	Trimeric LpxA-like enzymes
PERMA_1394	SSF53448	Nucleotide-diphospho-sugar transferases
PERMA_1395	SSF109998	Triger factor/SurA peptide-binding domain-like
PERMA_1395	SSF54534	FKBP-like
PERMA_1396	SSF47648	Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain
PERMA_1396	SSF52418	Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain
PERMA_1399	SSF51735	NAD(P)-binding Rossmann-fold domains
PERMA_1400	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
PERMA_1400	SSF88946	Sigma2 domain of RNA polymerase sigma factors
PERMA_1401	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PERMA_1402	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PERMA_1403	SSF56214	4'-phosphopantetheinyl transferase
PERMA_1404	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PERMA_1406	SSF69786	YggU-like
PERMA_1408	SSF111337	QueA-like
PERMA_1410	SSF51391	Thiamin phosphate synthase
PERMA_1412	SSF56770	HydA/Nqo6-like
PERMA_1413	SSF143243	Nqo5-like
PERMA_1413	SSF56762	HydB/Nqo4-like
PERMA_1415	SSF46548	alpha-helical ferredoxin
PERMA_1421	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PERMA_1423	SSF63562	RPB6/omega subunit-like
PERMA_1424	SSF47384	Homodimeric domain of signal transducing histidine kinase
PERMA_1424	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
PERMA_1425	SSF46689	Homeodomain-like
PERMA_1425	SSF52172	CheY-like
PERMA_1425	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PERMA_1426	SSF50249	Nucleic acid-binding proteins
PERMA_1426	SSF55681	Class II aaRS and biotin synthetases
PERMA_1427	SSF101478	ADP-ribosylglycohydrolase
PERMA_1428	SSF50182	Sm-like ribonucleoproteins
PERMA_1429	SSF46626	Cytochrome c
PERMA_1430	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PERMA_1431	SSF54814	Prokaryotic type KH domain (KH-domain type II)
PERMA_1432	SSF54565	Ribosomal protein S16
PERMA_1433	SSF47364	Domain of the SRP/SRP receptor G-proteins
PERMA_1433	SSF47446	Signal peptide-binding domain
PERMA_1433	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PERMA_1436	SSF51126	Pectin lyase-like
PERMA_1437	SSF63411	LuxS/MPP-like metallohydrolase
PERMA_1438	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
PERMA_1439	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
PERMA_1440	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PERMA_1441	SSF52016	LeuD/IlvD-like
PERMA_1441	SSF53732	Aconitase iron-sulfur domain
PERMA_1441	SSF74778	Aconitase B, N-terminal domain
PERMA_1442	SSF48452	TPR-like
PERMA_1442	SSF53448	Nucleotide-diphospho-sugar transferases
PERMA_1443	SSF51069	Carbonic anhydrase
PERMA_1445	SSF48695	Multiheme cytochromes
PERMA_1446	SSF46626	Cytochrome c
PERMA_1448	SSF48695	Multiheme cytochromes
PERMA_1449	SSF101898	NHL repeat
PERMA_1450	SSF110997	Sporulation related repeat
PERMA_1451	SSF109998	Triger factor/SurA peptide-binding domain-like
PERMA_1451	SSF54534	FKBP-like
PERMA_1452	SSF63829	Calcium-dependent phosphotriesterase
PERMA_1453	SSF48695	Multiheme cytochromes
PERMA_1454	SSF101898	NHL repeat
PERMA_1455	SSF48695	Multiheme cytochromes
PERMA_1456	SSF48695	Multiheme cytochromes
PERMA_1457	SSF48695	Multiheme cytochromes
PERMA_1458	SSF48695	Multiheme cytochromes
PERMA_1459	SSF48695	Multiheme cytochromes
PERMA_1460	SSF48695	Multiheme cytochromes
PERMA_1461	SSF51905	FAD/NAD(P)-binding domain
PERMA_1463	SSF54736	ClpS-like
PERMA_1464	SSF52374	Nucleotidylyl transferase
PERMA_1465	SSF50156	PDZ domain-like
PERMA_1465	SSF50494	Trypsin-like serine proteases
PERMA_1466	SSF56784	HAD-like
PERMA_1468	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
PERMA_1469	SSF47781	RuvA domain 2-like
PERMA_1471	SSF50891	Cyclophilin-like
PERMA_1474	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
PERMA_1474	SSF52374	Nucleotidylyl transferase
PERMA_1475	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
PERMA_1478	SSF46785	"Winged helix" DNA-binding domain
PERMA_1478	SSF51206	cAMP-binding domain-like
PERMA_1479	SSF56954	Outer membrane efflux proteins (OEP)
PERMA_1480	SSF111369	HlyD-like secretion proteins
PERMA_1481	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
PERMA_1481	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
PERMA_1481	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
PERMA_1482	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
PERMA_1482	SSF51735	NAD(P)-binding Rossmann-fold domains
PERMA_1483	SSF74653	TolA/TonB C-terminal domain
PERMA_1486	SSF75304	Amidase signature (AS) enzymes
PERMA_1487	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
PERMA_1488	SSF109635	DnaK suppressor protein DksA, alpha-hairpin domain
PERMA_1488	SSF57716	Glucocorticoid receptor-like (DNA-binding domain)
PERMA_1489	SSF52440	PreATP-grasp domain
PERMA_1489	SSF56059	Glutathione synthetase ATP-binding domain-like
PERMA_1491	SSF46689	Homeodomain-like
PERMA_1491	SSF52172	CheY-like
PERMA_1491	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PERMA_1494	SSF109604	HD-domain/PDEase-like
PERMA_1494	SSF52172	CheY-like
PERMA_1496	SSF53850	Periplasmic binding protein-like II
PERMA_1497	SSF52172	CheY-like
PERMA_1498	SSF158472	HAMP domain-like
PERMA_1498	SSF47384	Homodimeric domain of signal transducing histidine kinase
PERMA_1498	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
PERMA_1500	SSF52335	Methylglyoxal synthase-like
PERMA_1500	SSF53927	Cytidine deaminase-like
PERMA_1501	SSF81301	Nucleotidyltransferase
PERMA_1501	SSF81891	Poly A polymerase C-terminal region-like
PERMA_1502	SSF81891	Poly A polymerase C-terminal region-like
PERMA_1503	SSF52402	Adenine nucleotide alpha hydrolases-like
PERMA_1505	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PERMA_1506	SSF160246	EspE N-terminal domain-like
PERMA_1506	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PERMA_1507	SSF51246	Rudiment single hybrid motif
PERMA_1507	SSF52440	PreATP-grasp domain
PERMA_1507	SSF56059	Glutathione synthetase ATP-binding domain-like
PERMA_1508	SSF56281	Metallo-hydrolase/oxidoreductase
PERMA_1509	SSF51658	Xylose isomerase-like
PERMA_1511	SSF48576	Terpenoid synthases
PERMA_1512	SSF50692	ADC-like
PERMA_1513	SSF53955	Lysozyme-like
PERMA_1513	SSF54106	LysM domain
PERMA_1514	SSF51604	Enolase C-terminal domain-like
PERMA_1514	SSF56014	Nitrite and sulphite reductase 4Fe-4S domain-like
PERMA_1515	SSF55608	Homing endonucleases
PERMA_1517	SSF53633	Carbamate kinase-like
PERMA_1518	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PERMA_1519	SSF46458	Globin-like
PERMA_1521	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PERMA_1521	SSF81767	Pre-protein crosslinking domain of SecA
PERMA_1521	SSF81886	Helical scaffold and wing domains of SecA
PERMA_1523	SSF109635	DnaK suppressor protein DksA, alpha-hairpin domain
PERMA_1523	SSF57716	Glucocorticoid receptor-like (DNA-binding domain)
PERMA_1526	SSF103473	MFS general substrate transporter
PERMA_1528	SSF48256	Citrate synthase
PERMA_1529	SSF56784	HAD-like
PERMA_1529	SSF81653	Calcium ATPase, transduction domain A
PERMA_1529	SSF81665	Calcium ATPase, transmembrane domain M
PERMA_1530	SSF53850	Periplasmic binding protein-like II
PERMA_1531	SSF56529	FAH
PERMA_1532	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
PERMA_1534	SSF56672	DNA/RNA polymerases
PERMA_1535	SSF53098	Ribonuclease H-like
PERMA_1538	SSF46785	"Winged helix" DNA-binding domain
PERMA_1538	SSF51306	LexA/Signal peptidase
PERMA_1539	SSF55979	DNA clamp
PERMA_1540	SSF54211	Ribosomal protein S5 domain 2-like
PERMA_1540	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
PERMA_1540	SSF56719	Type II DNA topoisomerase
PERMA_1541	SSF46626	Cytochrome c
PERMA_1542	SSF141868	EAL domain-like
PERMA_1542	SSF55073	Nucleotide cyclase
PERMA_1542	SSF55781	GAF domain-like
PERMA_1542	SSF55785	PYP-like sensor domain (PAS domain)
PERMA_1543	SSF111369	HlyD-like secretion proteins
PERMA_1544	SSF56954	Outer membrane efflux proteins (OEP)
PERMA_1545	SSF56322	ADC synthase
PERMA_1547	SSF101801	Surface presentation of antigens (SPOA)
PERMA_1548	SSF47384	Homodimeric domain of signal transducing histidine kinase
PERMA_1548	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
PERMA_1549	SSF46689	Homeodomain-like
PERMA_1549	SSF52172	CheY-like
PERMA_1549	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PERMA_1550	SSF160443	SMR domain-like
PERMA_1550	SSF48334	DNA repair protein MutS, domain III
PERMA_1550	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PERMA_1551	SSF52317	Class I glutamine amidotransferase-like
PERMA_1552	SSF53067	Actin-like ATPase domain
PERMA_1553	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
PERMA_1555	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
PERMA_1556	SSF48695	Multiheme cytochromes
PERMA_1557	SSF53697	SIS domain
PERMA_1558	SSF46589	tRNA-binding arm
PERMA_1558	SSF55681	Class II aaRS and biotin synthetases
PERMA_1559	SSF48452	TPR-like
PERMA_1560	SSF52317	Class I glutamine amidotransferase-like
PERMA_1562	SSF101904	GyrA/ParC C-terminal domain-like
PERMA_1562	SSF51294	Hedgehog/intein (Hint) domain
PERMA_1562	SSF55608	Homing endonucleases
PERMA_1562	SSF56719	Type II DNA topoisomerase
PERMA_1566	SSF53218	Molybdenum cofactor biosynthesis proteins
PERMA_1566	SSF55040	Molybdenum cofactor biosynthesis protein C, MoaC
PERMA_1567	SSF53271	PRTase-like
PERMA_1568	SSF55729	Acyl-CoA N-acyltransferases (Nat)
PERMA_1569	SSF142695	RibA-like
PERMA_1569	SSF55821	YrdC/RibB
PERMA_1571	SSF56935	Porins
PERMA_1572	SSF53850	Periplasmic binding protein-like II
PERMA_1573	SSF161098	MetI-like
PERMA_1574	SSF161098	MetI-like
PERMA_1575	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PERMA_1576	SSF109755	PhoU-like
PERMA_1577	SSF47384	Homodimeric domain of signal transducing histidine kinase
PERMA_1577	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
PERMA_1578	SSF56784	HAD-like
PERMA_1579	SSF82544	GckA/TtuD-like
PERMA_1580	SSF53448	Nucleotide-diphospho-sugar transferases
PERMA_1581	SSF53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes
PERMA_1582	SSF53448	Nucleotide-diphospho-sugar transferases
PERMA_1583	SSF46929	DNA helicase RuvA subunit, C-terminal domain
PERMA_1583	SSF47781	RuvA domain 2-like
PERMA_1583	SSF50249	Nucleic acid-binding proteins
PERMA_1584	SSF53720	ALDH-like
PERMA_1585	SSF54913	GlnB-like
PERMA_1586	SSF54368	Glutamine synthetase, N-terminal domain
PERMA_1586	SSF55931	Glutamine synthetase/guanido kinase
PERMA_1587	SSF141371	PilZ domain-like
PERMA_1589	SSF48452	TPR-like
PERMA_1589	SSF81901	HCP-like
PERMA_1590	SSF102405	MCP/YpsA-like
PERMA_1591	SSF56112	Protein kinase-like (PK-like)
PERMA_1592	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PERMA_1594	SSF103473	MFS general substrate transporter
PERMA_1595	SSF49503	Cupredoxins
PERMA_1596	SSF55120	Pseudouridine synthase
PERMA_1597	SSF47729	IHF-like DNA-binding proteins
PERMA_1598	SSF54862	4Fe-4S ferredoxins
PERMA_1599	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PERMA_1599	SSF75712	Rad50 coiled-coil Zn hook
PERMA_1600	SSF89957	MTH1187/YkoF-like
PERMA_1601	SSF50249	Nucleic acid-binding proteins
PERMA_1601	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
PERMA_1602	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PERMA_1603	SSF54631	CBS-domain pair
PERMA_1603	SSF56176	FAD-binding/transporter-associated domain-like
PERMA_1605	SSF54631	CBS-domain pair
PERMA_1605	SSF56176	FAD-binding/transporter-associated domain-like
PERMA_1606	SSF103473	MFS general substrate transporter
PERMA_1607	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
PERMA_1608	SSF48150	DNA-glycosylase
PERMA_1610	SSF52402	Adenine nucleotide alpha hydrolases-like
PERMA_1611	SSF47598	Ribbon-helix-helix
PERMA_1611	SSF54060	His-Me finger endonucleases
PERMA_1612	SSF143865	CorA soluble domain-like
PERMA_1612	SSF144083	Magnesium transport protein CorA, transmembrane region
PERMA_1614	SSF64518	Phase 1 flagellin
PERMA_1615	SSF64518	Phase 1 flagellin
PERMA_1617	SSF101116	Flagellar export chaperone FliS
PERMA_1619	SSF160214	FlaG-like
PERMA_1620	SSF64518	Phase 1 flagellin
PERMA_1622	SSF53448	Nucleotide-diphospho-sugar transferases
PERMA_1623	SSF53448	Nucleotide-diphospho-sugar transferases
PERMA_1623	SSF54631	CBS-domain pair
PERMA_1624	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
PERMA_1625	SSF88723	PIN domain-like
PERMA_1627	SSF51269	AFP III-like domain
PERMA_1627	SSF51569	Aldolase
PERMA_1628	SSF51161	Trimeric LpxA-like enzymes
PERMA_1629	SSF53383	PLP-dependent transferases
PERMA_1630	SSF51735	NAD(P)-binding Rossmann-fold domains
PERMA_1633	SSF56752	D-aminoacid aminotransferase-like PLP-dependent enzymes
PERMA_1634	SSF53633	Carbamate kinase-like
PERMA_1634	SSF55021	ACT-like
PERMA_1635	SSF51246	Rudiment single hybrid motif
PERMA_1635	SSF52440	PreATP-grasp domain
PERMA_1635	SSF56059	Glutathione synthetase ATP-binding domain-like
PERMA_1636	SSF51604	Enolase C-terminal domain-like
PERMA_1636	SSF54826	Enolase N-terminal domain-like
PERMA_1638	SSF56266	DmpA/ArgJ-like
PERMA_1639	SSF56784	HAD-like
PERMA_1641	SSF53706	Formate dehydrogenase/DMSO reductase, domains 1-3
PERMA_1641	SSF54292	2Fe-2S ferredoxin-like
PERMA_1641	SSF54862	4Fe-4S ferredoxins
PERMA_1643	SSF53474	alpha/beta-Hydrolases
PERMA_1644	SSF51283	dUTPase-like
PERMA_1645	SSF55298	YjgF-like
PERMA_1646	SSF51366	Ribulose-phoshate binding barrel
PERMA_1647	SSF56112	Protein kinase-like (PK-like)
PERMA_1648	SSF69796	Thymidylate synthase-complementing protein Thy1
PERMA_1649	SSF109604	HD-domain/PDEase-like
PERMA_1649	SSF141868	EAL domain-like
PERMA_1650	SSF52949	Macro domain-like
PERMA_1651	SSF52980	Restriction endonuclease-like
PERMA_1652	SSF63411	LuxS/MPP-like metallohydrolase
PERMA_1653	SSF141868	EAL domain-like
PERMA_1653	SSF55073	Nucleotide cyclase
PERMA_1655	SSF56935	Porins
PERMA_1656	SSF53448	Nucleotide-diphospho-sugar transferases
PERMA_1657	SSF56954	Outer membrane efflux proteins (OEP)
PERMA_1658	SSF46785	"Winged helix" DNA-binding domain
PERMA_1659	SSF50475	FMN-binding split barrel
PERMA_1664	SSF53613	Ribokinase-like
PERMA_1665	SSF53271	PRTase-like
PERMA_1666	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
PERMA_1666	SSF51735	NAD(P)-binding Rossmann-fold domains
PERMA_1666	SSF52413	UDP-glucose/GDP-mannose dehydrogenase C-terminal domain
PERMA_1668	SSF56276	S-adenosylmethionine decarboxylase
PERMA_1670	SSF47644	Methionine synthase domain
PERMA_1670	SSF51717	Dihydropteroate synthetase-like
PERMA_1670	SSF52242	Cobalamin (vitamin B12)-binding domain
PERMA_1670	SSF56507	Methionine synthase activation domain-like
PERMA_1670	SSF82282	Homocysteine S-methyltransferase
PERMA_1671	SSF53800	Chelatase
PERMA_1673	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
PERMA_1673	SSF88946	Sigma2 domain of RNA polymerase sigma factors
PERMA_1674	SSF56731	DNA primase core
PERMA_1674	SSF57783	Zinc beta-ribbon
PERMA_1675	SSF51717	Dihydropteroate synthetase-like
PERMA_1676	SSF143597	YojJ-like
PERMA_1678	SSF52954	Class II aaRS ABD-related
PERMA_1678	SSF55186	ThrRS/AlaRS common domain
PERMA_1678	SSF55681	Class II aaRS and biotin synthetases
PERMA_1679	SSF46894	C-terminal effector domain of the bipartite response regulators
PERMA_1679	SSF52172	CheY-like
PERMA_1682	SSF53720	ALDH-like
PERMA_1683	SSF46785	"Winged helix" DNA-binding domain
PERMA_1683	SSF51206	cAMP-binding domain-like
PERMA_1684	SSF51621	Phosphoenolpyruvate/pyruvate domain
PERMA_1685	SSF51735	NAD(P)-binding Rossmann-fold domains
PERMA_1685	SSF53223	Aminoacid dehydrogenase-like, N-terminal domain
PERMA_1686	SSF55821	YrdC/RibB
PERMA_1687	SSF56276	S-adenosylmethionine decarboxylase
PERMA_1689	SSF51726	UROD/MetE-like
PERMA_1691	SSF46785	"Winged helix" DNA-binding domain
PERMA_1692	SSF56935	Porins
PERMA_1695	SSF51344	Epsilon subunit of F1F0-ATP synthase N-terminal domain
PERMA_1696	SSF47917	C-terminal domain of alpha and beta subunits of F1 ATP synthase
PERMA_1696	SSF50615	N-terminal domain of alpha and beta subunits of F1 ATP synthase
PERMA_1696	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PERMA_1697	SSF52943	ATP synthase (F1-ATPase), gamma subunit
PERMA_1698	SSF47917	C-terminal domain of alpha and beta subunits of F1 ATP synthase
PERMA_1698	SSF50615	N-terminal domain of alpha and beta subunits of F1 ATP synthase
PERMA_1698	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PERMA_1700	SSF81333	F1F0 ATP synthase subunit C
PERMA_1701	SSF81336	F1F0 ATP synthase subunit A
PERMA_1704	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
PERMA_1704	SSF52922	TK C-terminal domain-like
PERMA_1705	SSF55729	Acyl-CoA N-acyltransferases (Nat)
PERMA_1706	SSF55120	Pseudouridine synthase
PERMA_1708	SSF54197	HIT-like
PERMA_1709	SSF101386	all-alpha NTP pyrophosphatases
PERMA_1711	SSF52096	ClpP/crotonase
PERMA_1712	SSF51735	NAD(P)-binding Rossmann-fold domains
PERMA_1712	SSF53223	Aminoacid dehydrogenase-like, N-terminal domain
PERMA_1714	SSF48256	Citrate synthase
PERMA_1714	SSF51735	NAD(P)-binding Rossmann-fold domains
PERMA_1715	SSF52210	Succinyl-CoA synthetase domains
PERMA_1715	SSF56059	Glutathione synthetase ATP-binding domain-like
PERMA_1716	SSF53659	Isocitrate/Isopropylmalate dehydrogenase-like
PERMA_1717	SSF53732	Aconitase iron-sulfur domain
PERMA_1719	SSF53098	Ribonuclease H-like
PERMA_1722	SSF55205	EPT/RTPC-like
PERMA_1723	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PERMA_1726	SSF51735	NAD(P)-binding Rossmann-fold domains
PERMA_1726	SSF69075	Glutamyl tRNA-reductase dimerization domain
PERMA_1726	SSF69742	Glutamyl tRNA-reductase catalytic, N-terminal domain
PERMA_1727	SSF161070	SNF-like
PERMA_1729	SSF54919	Nucleoside diphosphate kinase, NDK
PERMA_1731	SSF158472	HAMP domain-like
PERMA_1733	SSF103196	Roadblock/LC7 domain
PERMA_1735	SSF51338	Composite domain of metallo-dependent hydrolases
PERMA_1735	SSF51556	Metallo-dependent hydrolases
PERMA_1736	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PERMA_1738	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PERMA_1739	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PERMA_1739	SSF81923	Double Clp-N motif
PERMA_1741	SSF111384	OmpH-like
PERMA_1743	SSF51161	Trimeric LpxA-like enzymes
PERMA_1744	SSF52833	Thioredoxin-like
PERMA_1746	SSF46548	alpha-helical ferredoxin
PERMA_1746	SSF54292	2Fe-2S ferredoxin-like
PERMA_1747	SSF51735	NAD(P)-binding Rossmann-fold domains
PERMA_1748	SSF51905	FAD/NAD(P)-binding domain
PERMA_1749	SSF51569	Aldolase
PERMA_1752	SSF54197	HIT-like
PERMA_1753	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PERMA_1754	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
PERMA_1755	SSF54001	Cysteine proteinases
PERMA_1756	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
PERMA_1757	SSF52374	Nucleotidylyl transferase
PERMA_1759	SSF48019	post-AAA+ oligomerization domain-like
PERMA_1759	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PERMA_1760	SSF46785	"Winged helix" DNA-binding domain
PERMA_1760	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PERMA_1761	SSF142754	NadA-like
PERMA_1762	SSF52821	Rhodanese/Cell cycle control phosphatase
PERMA_1763	SSF55103	FAD-linked oxidases, C-terminal domain
PERMA_1763	SSF56176	FAD-binding/transporter-associated domain-like
PERMA_1764	SSF56281	Metallo-hydrolase/oxidoreductase
PERMA_1766	SSF53187	Zn-dependent exopeptidases
PERMA_1767	SSF55073	Nucleotide cyclase
PERMA_1768	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
PERMA_1769	SSF47188	Hemerythrin-like
PERMA_1770	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PERMA_1783	SSF69279	Phage tail proteins
PERMA_1787	SSF159006	YopX-like
PERMA_1789	SSF47729	IHF-like DNA-binding proteins
PERMA_1790	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PERMA_1793	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PERMA_1794	SSF46689	Homeodomain-like
PERMA_1794	SSF53098	Ribonuclease H-like
PERMA_1795	SSF110849	ParB/Sulfiredoxin
PERMA_1798	SSF47413	lambda repressor-like DNA-binding domains
PERMA_1806	SSF69255	gp5 N-terminal domain-like
PERMA_1808	SSF160719	gpW/gp25-like
PERMA_1811	SSF52980	Restriction endonuclease-like
PERMA_1829	SSF46689	Homeodomain-like
PERMA_1829	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PERMA_1830	SSF53697	SIS domain
PERMA_1831	SSF48452	TPR-like
PERMA_1832	SSF103473	MFS general substrate transporter
PERMA_1833	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PERMA_1834	SSF53271	PRTase-like
PERMA_1837	SSF54862	4Fe-4S ferredoxins
PERMA_1838	SSF102114	Radical SAM enzymes
PERMA_1839	SSF48695	Multiheme cytochromes
PERMA_1840	SSF47781	RuvA domain 2-like
PERMA_1840	SSF50249	Nucleic acid-binding proteins
PERMA_1840	SSF52113	BRCT domain
PERMA_1840	SSF56091	DNA ligase/mRNA capping enzyme, catalytic domain
PERMA_1841	SSF51569	Aldolase
PERMA_1842	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
PERMA_1844	SSF46955	Putative DNA-binding domain
PERMA_1845	SSF46565	Chaperone J-domain
PERMA_1845	SSF49493	HSP40/DnaJ peptide-binding domain
PERMA_1845	SSF57938	DnaJ/Hsp40 cysteine-rich domain
PERMA_1846	SSF53720	ALDH-like
PERMA_1847	SSF64438	CNF1/YfiH-like putative cysteine hydrolases
PERMA_1848	SSF52096	ClpP/crotonase
PERMA_1849	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PERMA_1850	SSF54975	Acylphosphatase/BLUF domain-like
PERMA_1851	SSF51261	Duplicated hybrid motif
PERMA_1851	SSF54106	LysM domain
PERMA_1852	SSF53383	PLP-dependent transferases
PERMA_1853	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PERMA_1856	SSF53474	alpha/beta-Hydrolases
PERMA_1857	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
PERMA_1860	SSF46689	Homeodomain-like
PERMA_1863	SSF88723	PIN domain-like
PERMA_1867	SSF88723	PIN domain-like
PERMA_1868	SSF89447	AbrB/MazE/MraZ-like
PERMA_1869	SSF88723	PIN domain-like
PERMA_1871	SSF55073	Nucleotide cyclase
PERMA_1872	SSF53639	AraD/HMP-PK domain-like
PERMA_1873	SSF51182	RmlC-like cupins
PERMA_1874	SSF51735	NAD(P)-binding Rossmann-fold domains
PERMA_1875	SSF54285	MoaD/ThiS
PERMA_1876	SSF47188	Hemerythrin-like
PERMA_1877	SSF52954	Class II aaRS ABD-related
PERMA_1877	SSF55681	Class II aaRS and biotin synthetases
PERMA_1878	SSF51713	tRNA-guanine transglycosylase
PERMA_1880	SSF52768	Arginase/deacetylase
PERMA_1881	SSF141868	EAL domain-like
PERMA_1881	SSF55073	Nucleotide cyclase
PERMA_1882	SSF53244	MurD-like peptide ligases, peptide-binding domain
PERMA_1882	SSF53623	MurD-like peptide ligases, catalytic domain
PERMA_1882	SSF63418	MurE/MurF N-terminal domain
PERMA_1884	SSF56935	Porins
PERMA_1885	SSF103247	TT1751-like
PERMA_1886	SSF56935	Porins
PERMA_1887	SSF103247	TT1751-like
PERMA_1888	SSF55816	5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain
PERMA_1888	SSF56300	Metallo-dependent phosphatases
PERMA_1889	SSF46626	Cytochrome c
PERMA_1890	SSF81296	E set domains
PERMA_1892	SSF52833	Thioredoxin-like
PERMA_1893	SSF46626	Cytochrome c
PERMA_1894	SSF46689	Homeodomain-like
PERMA_1894	SSF52172	CheY-like
PERMA_1894	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PERMA_1895	SSF75169	DsrEFH-like
PERMA_1896	SSF53850	Periplasmic binding protein-like II
PERMA_1898	SSF53955	Lysozyme-like
PERMA_1899	SSF63380	Riboflavin synthase domain-like
PERMA_1900	SSF116726	TrkA C-terminal domain-like
PERMA_1900	SSF51735	NAD(P)-binding Rossmann-fold domains
PERMA_1900	SSF81324	Voltage-gated potassium channels
PERMA_1901	SSF117018	ATP-dependent DNA ligase DNA-binding domain
PERMA_1901	SSF50249	Nucleic acid-binding proteins
PERMA_1901	SSF56091	DNA ligase/mRNA capping enzyme, catalytic domain
PERMA_1903	SSF51905	FAD/NAD(P)-binding domain
PERMA_1904	SSF52949	Macro domain-like
PERMA_1904	SSF53187	Zn-dependent exopeptidases
PERMA_1905	SSF53901	Thiolase-like
PERMA_1906	SSF49367	Superoxide reductase-like
PERMA_1907	SSF53597	Dihydrofolate reductase-like
PERMA_1907	SSF53927	Cytidine deaminase-like
PERMA_1909	SSF47802	DNA polymerase beta, N-terminal domain-like
PERMA_1909	SSF81301	Nucleotidyltransferase
PERMA_1909	SSF89550	PHP domain-like
PERMA_1911	SSF48163	An anticodon-binding domain of class I aminoacyl-tRNA synthetases
PERMA_1911	SSF52374	Nucleotidylyl transferase
PERMA_1912	SSF52799	(Phosphotyrosine protein) phosphatases II
PERMA_1915	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PERMA_1916	SSF161098	MetI-like
PERMA_1917	SSF50331	MOP-like
PERMA_1918	SSF53850	Periplasmic binding protein-like II
PERMA_1919	SSF46785	"Winged helix" DNA-binding domain
PERMA_1919	SSF50331	MOP-like
PERMA_1920	SSF51735	NAD(P)-binding Rossmann-fold domains
PERMA_1920	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
PERMA_1921	SSF53448	Nucleotide-diphospho-sugar transferases
PERMA_1922	SSF49464	Carboxypeptidase regulatory domain-like
PERMA_1923	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PERMA_1923	SSF75553	Smc hinge domain
PERMA_1924	SSF56801	Acetyl-CoA synthetase-like
PERMA_1925	SSF56935	Porins
PERMA_1926	SSF53383	PLP-dependent transferases
PERMA_1928	SSF48208	Six-hairpin glycosidases
PERMA_1928	SSF52833	Thioredoxin-like
PERMA_1930	SSF52374	Nucleotidylyl transferase
PERMA_1932	SSF46785	"Winged helix" DNA-binding domain
PERMA_1945	SSF50324	Inorganic pyrophosphatase
PERMA_1947	SSF46589	tRNA-binding arm
PERMA_1947	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
PERMA_1947	SSF50677	ValRS/IleRS/LeuRS editing domain
PERMA_1947	SSF52374	Nucleotidylyl transferase
PERMA_1949	SSF56925	OMPA-like
PERMA_1950	SSF52402	Adenine nucleotide alpha hydrolases-like
PERMA_1950	SSF69864	Argininosuccinate synthetase, C-terminal domain
PERMA_1951	SSF48452	TPR-like
PERMA_1951	SSF81901	HCP-like
PERMA_1952	SSF51430	NAD(P)-linked oxidoreductase
PERMA_1953	SSF102114	Radical SAM enzymes
PERMA_1954	SSF52833	Thioredoxin-like
PERMA_1956	SSF52821	Rhodanese/Cell cycle control phosphatase
PERMA_1957	SSF53955	Lysozyme-like
PERMA_1958	SSF53955	Lysozyme-like
PERMA_1963	SSF55486	Metalloproteases ("zincins"), catalytic domain
PERMA_1965	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PERMA_1966	SSF50346	PRC-barrel domain
PERMA_1966	SSF50447	Translation proteins
PERMA_1969	SSF48452	TPR-like
PERMA_1970	SSF52374	Nucleotidylyl transferase
PERMA_1970	SSF82114	Riboflavin kinase-like
PERMA_1972	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PERMA_1973	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PERMA_1973	SSF54752	RecA protein, C-terminal domain
PERMA_1974	SSF141000	Glu-tRNAGln amidotransferase C subunit
PERMA_1975	SSF56712	Prokaryotic type I DNA topoisomerase
PERMA_1976	SSF52402	Adenine nucleotide alpha hydrolases-like
PERMA_1977	SSF51261	Duplicated hybrid motif
PERMA_1978	SSF75620	Release factor
PERMA_1980	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
PERMA_1981	SSF57884	Ada DNA repair protein, N-terminal domain (N-Ada 10)
PERMA_1982	SSF53697	SIS domain
PERMA_1982	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
PERMA_1983	SSF52374	Nucleotidylyl transferase
PERMA_1983	SSF88697	PUA domain-like
PERMA_1985	SSF81301	Nucleotidyltransferase
PERMA_1986	SSF81301	Nucleotidyltransferase
PERMA_1987	SSF56655	Carbohydrate phosphatase
PERMA_1988	SSF116726	TrkA C-terminal domain-like
PERMA_1989	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PERMA_1990	SSF81301	Nucleotidyltransferase
PERMA_1991	SSF81593	Nucleotidyltransferase substrate binding subunit/domain
PERMA_1993	SSF53448	Nucleotide-diphospho-sugar transferases
PERMA_1994	SSF51735	NAD(P)-binding Rossmann-fold domains
PERMA_1995	SSF51735	NAD(P)-binding Rossmann-fold domains
PERMA_1996	SSF53383	PLP-dependent transferases
PERMA_1997	SSF51735	NAD(P)-binding Rossmann-fold domains
PERMA_1998	SSF53448	Nucleotide-diphospho-sugar transferases
PERMA_2001	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PERMA_2002	SSF51735	NAD(P)-binding Rossmann-fold domains
PERMA_2003	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
PERMA_2004	SSF51182	RmlC-like cupins
PERMA_2004	SSF53448	Nucleotide-diphospho-sugar transferases
PERMA_2006	SSF88723	PIN domain-like
PERMA_2007	SSF51735	NAD(P)-binding Rossmann-fold domains
PERMA_2008	SSF51735	NAD(P)-binding Rossmann-fold domains
PERMA_2010	SSF56281	Metallo-hydrolase/oxidoreductase
PERMA_2012	SSF52980	Restriction endonuclease-like
PERMA_2013	SSF81593	Nucleotidyltransferase substrate binding subunit/domain
PERMA_2014	SSF52980	Restriction endonuclease-like
PERMA_2015	SSF55083	6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK
PERMA_2017	SSF141523	L,D-transpeptidase catalytic domain-like
PERMA_2017	SSF54106	LysM domain
PERMA_2019	SSF56784	HAD-like
PERMA_2020	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
PERMA_2023	SSF56935	Porins
PERMA_2024	SSF111352	Ammonium transporter
PERMA_2025	SSF54913	GlnB-like
PERMA_2026	SSF48592	GroEL equatorial domain-like
PERMA_2026	SSF52029	GroEL apical domain-like
PERMA_2026	SSF54849	GroEL-intermediate domain like
PERMA_2027	SSF50129	GroES-like