Plim_0009	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Plim_0009	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Plim_0011	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Plim_0011	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Plim_0014	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
Plim_0047	PWY-6164	3-dehydroquinate biosynthesis I
Plim_0052	PWY-5958	acridone alkaloid biosynthesis
Plim_0052	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
Plim_0052	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
Plim_0062	PWY-1042	glycolysis IV (plant cytosol)
Plim_0062	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Plim_0062	PWY-5484	glycolysis II (from fructose 6-phosphate)
Plim_0062	PWY-7385	1,3-propanediol biosynthesis (engineered)
Plim_0081	PWY-5381	pyridine nucleotide cycling (plants)
Plim_0081	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
Plim_0093	PWY-6871	3-methylbutanol biosynthesis
Plim_0096	PWY-5386	methylglyoxal degradation I
Plim_0097	PWY-5198	factor 420 biosynthesis
Plim_0097	PWY-7371	1,4-dihydroxy-6-naphthoate biosynthesis II
Plim_0097	PWY-7374	1,4-dihydroxy-6-naphthoate biosynthesis I
Plim_0104	PWY-7039	phosphatidate metabolism, as a signaling molecule
Plim_0134	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
Plim_0134	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
Plim_0134	PWY-6164	3-dehydroquinate biosynthesis I
Plim_0163	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
Plim_0174	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Plim_0176	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Plim_0179	PWY-6829	tRNA methylation (yeast)
Plim_0179	PWY-7285	methylwyosine biosynthesis
Plim_0179	PWY-7286	7-(3-amino-3-carboxypropyl)-wyosine biosynthesis
Plim_0184	PWY-4621	arsenate detoxification II (glutaredoxin)
Plim_0185	PWY-2941	L-lysine biosynthesis II
Plim_0185	PWY-5097	L-lysine biosynthesis VI
Plim_0191	PWY-2201	folate transformations I
Plim_0191	PWY-5497	purine nucleobases degradation II (anaerobic)
Plim_0194	PWY-5316	nicotine biosynthesis
Plim_0194	PWY-5381	pyridine nucleotide cycling (plants)
Plim_0194	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
Plim_0194	PWY-7342	superpathway of nicotine biosynthesis
Plim_0205	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
Plim_0205	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
Plim_0205	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
Plim_0205	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
Plim_0270	PWY-3781	aerobic respiration I (cytochrome c)
Plim_0270	PWY-4302	aerobic respiration III (alternative oxidase pathway)
Plim_0270	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
Plim_0270	PWY-6692	Fe(II) oxidation
Plim_0290	PWY-40	putrescine biosynthesis I
Plim_0290	PWY-6305	putrescine biosynthesis IV
Plim_0292	PWY-5686	UMP biosynthesis
Plim_0308	PWY-1042	glycolysis IV (plant cytosol)
Plim_0308	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
Plim_0308	PWY-5484	glycolysis II (from fructose 6-phosphate)
Plim_0308	PWY-5723	Rubisco shunt
Plim_0308	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Plim_0308	PWY-6886	1-butanol autotrophic biosynthesis
Plim_0308	PWY-6901	superpathway of glucose and xylose degradation
Plim_0308	PWY-7003	glycerol degradation to butanol
Plim_0308	PWY-7124	ethylene biosynthesis V (engineered)
Plim_0308	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
Plim_0313	PWY-5340	sulfate activation for sulfonation
Plim_0331	PWY-7205	CMP phosphorylation
Plim_0334	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Plim_0334	PWY-5686	UMP biosynthesis
Plim_0334	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Plim_0338	PWY-6891	thiazole biosynthesis II (Bacillus)
Plim_0338	PWY-6892	thiazole biosynthesis I (E. coli)
Plim_0338	PWY-7560	methylerythritol phosphate pathway II
Plim_0339	PWY-6891	thiazole biosynthesis II (Bacillus)
Plim_0339	PWY-6892	thiazole biosynthesis I (E. coli)
Plim_0339	PWY-7560	methylerythritol phosphate pathway II
Plim_0370	PWY-5839	menaquinol-7 biosynthesis
Plim_0370	PWY-5844	menaquinol-9 biosynthesis
Plim_0370	PWY-5849	menaquinol-6 biosynthesis
Plim_0370	PWY-5890	menaquinol-10 biosynthesis
Plim_0370	PWY-5891	menaquinol-11 biosynthesis
Plim_0370	PWY-5892	menaquinol-12 biosynthesis
Plim_0370	PWY-5895	menaquinol-13 biosynthesis
Plim_0413	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
Plim_0413	PWY-622	starch biosynthesis
Plim_0452	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
Plim_0463	PWY-4381	fatty acid biosynthesis initiation I
Plim_0463	PWY-6799	fatty acid biosynthesis (plant mitochondria)
Plim_0463	PWY-723	alkylnitronates degradation
Plim_0463	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Plim_0526	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
Plim_0591	PWY-2161	folate polyglutamylation
Plim_0604	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
Plim_0604	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
Plim_0604	PWY-6897	thiamin salvage II
Plim_0604	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
Plim_0604	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
Plim_0604	PWY-7353	4-methyl-5(&beta;-hydroxyethyl)thiazole salvage (yeast)
Plim_0604	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
Plim_0608	PWY-2582	brassinosteroid biosynthesis II
Plim_0608	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
Plim_0608	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
Plim_0608	PWY-6948	sitosterol degradation to androstenedione
Plim_0608	PWY-699	brassinosteroid biosynthesis I
Plim_0608	PWY-7299	progesterone biosynthesis
Plim_0610	PWY-7560	methylerythritol phosphate pathway II
Plim_0612	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
Plim_0621	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
Plim_0622	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
Plim_0647	PWY-1042	glycolysis IV (plant cytosol)
Plim_0647	PWY-5484	glycolysis II (from fructose 6-phosphate)
Plim_0647	PWY-6901	superpathway of glucose and xylose degradation
Plim_0647	PWY-7003	glycerol degradation to butanol
Plim_0648	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Plim_0648	PWY-5723	Rubisco shunt
Plim_0650	PWY-4381	fatty acid biosynthesis initiation I
Plim_0650	PWY-5743	3-hydroxypropanoate cycle
Plim_0650	PWY-5744	glyoxylate assimilation
Plim_0650	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Plim_0650	PWY-6679	jadomycin biosynthesis
Plim_0650	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Plim_0680	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Plim_0680	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Plim_0683	PWY-381	nitrate reduction II (assimilatory)
Plim_0683	PWY-5675	nitrate reduction V (assimilatory)
Plim_0683	PWY-6549	L-glutamine biosynthesis III
Plim_0683	PWY-6963	ammonia assimilation cycle I
Plim_0683	PWY-6964	ammonia assimilation cycle II
Plim_0714	PWY-5523	5,6-dimethylbenzimidazole biosynthesis
Plim_0714	PWY-6167	flavin biosynthesis II (archaea)
Plim_0714	PWY-6168	flavin biosynthesis III (fungi)
Plim_0722	PWY-4261	glycerol degradation I
Plim_0731	PWY-6424	Plim_0731|Plim_0731|YP_003628776.1|GeneID:9137414
Plim_0733	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Plim_0738	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Plim_0738	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
Plim_0738	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
Plim_0748	PWY-5663	tetrahydrobiopterin biosynthesis I
Plim_0748	PWY-5664	tetrahydrobiopterin biosynthesis II
Plim_0748	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
Plim_0748	PWY-6703	preQ<sub>0</sub> biosynthesis
Plim_0748	PWY-6983	tetrahydrobiopterin biosynthesis III
Plim_0748	PWY-7442	drosopterin and aurodrosopterin biosynthesis
Plim_0761	PWY-5958	acridone alkaloid biosynthesis
Plim_0761	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
Plim_0761	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
Plim_0764	PWY-7560	methylerythritol phosphate pathway II
Plim_0773	PWY-1042	glycolysis IV (plant cytosol)
Plim_0773	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
Plim_0773	PWY-5484	glycolysis II (from fructose 6-phosphate)
Plim_0773	PWY-5723	Rubisco shunt
Plim_0773	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Plim_0773	PWY-6886	1-butanol autotrophic biosynthesis
Plim_0773	PWY-6901	superpathway of glucose and xylose degradation
Plim_0773	PWY-7003	glycerol degradation to butanol
Plim_0773	PWY-7124	ethylene biosynthesis V (engineered)
Plim_0773	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
Plim_0842	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
Plim_0853	PWY-5392	reductive TCA cycle II
Plim_0853	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
Plim_0853	PWY-5690	TCA cycle II (plants and fungi)
Plim_0853	PWY-5913	TCA cycle VI (obligate autotrophs)
Plim_0853	PWY-6728	methylaspartate cycle
Plim_0853	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Plim_0853	PWY-7254	TCA cycle VII (acetate-producers)
Plim_0853	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Plim_0864	PWY-6823	molybdenum cofactor biosynthesis
Plim_0866	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Plim_0866	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Plim_0874	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
Plim_0874	PWY-6148	tetrahydromethanopterin biosynthesis
Plim_0874	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
Plim_0874	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
Plim_0925	PWY-2582	brassinosteroid biosynthesis II
Plim_0925	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
Plim_0925	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
Plim_0925	PWY-6948	sitosterol degradation to androstenedione
Plim_0925	PWY-699	brassinosteroid biosynthesis I
Plim_0925	PWY-7299	progesterone biosynthesis
Plim_1015	PWY-6825	phosphatidylcholine biosynthesis V
Plim_1023	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
Plim_1023	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
Plim_1023	PWY-6269	adenosylcobalamin salvage from cobinamide II
Plim_1024	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
Plim_1024	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
Plim_1024	PWY-6269	adenosylcobalamin salvage from cobinamide II
Plim_1041	PWY-66	GDP-L-fucose biosynthesis I (from GDP-D-mannose)
Plim_1108	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Plim_1131	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
Plim_1131	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
Plim_1131	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
Plim_1133	PWY-1622	formaldehyde assimilation I (serine pathway)
Plim_1133	PWY-5392	reductive TCA cycle II
Plim_1133	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
Plim_1133	PWY-5690	TCA cycle II (plants and fungi)
Plim_1133	PWY-5913	TCA cycle VI (obligate autotrophs)
Plim_1133	PWY-6728	methylaspartate cycle
Plim_1133	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Plim_1133	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
Plim_1133	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
Plim_1134	PWY-622	starch biosynthesis
Plim_1159	PWY-5316	nicotine biosynthesis
Plim_1159	PWY-7342	superpathway of nicotine biosynthesis
Plim_1187	PWY-5381	pyridine nucleotide cycling (plants)
Plim_1187	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
Plim_1187	PWY-6596	adenosine nucleotides degradation I
Plim_1187	PWY-6606	guanosine nucleotides degradation II
Plim_1187	PWY-6607	guanosine nucleotides degradation I
Plim_1187	PWY-6608	guanosine nucleotides degradation III
Plim_1187	PWY-7185	UTP and CTP dephosphorylation I
Plim_1192	PWY-5101	L-isoleucine biosynthesis II
Plim_1192	PWY-5103	L-isoleucine biosynthesis III
Plim_1192	PWY-5104	L-isoleucine biosynthesis IV
Plim_1192	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
Plim_1192	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
Plim_1192	PWY-6389	(<i>S</i>)-acetoin biosynthesis
Plim_1192	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Plim_1193	PWY-5101	L-isoleucine biosynthesis II
Plim_1193	PWY-5103	L-isoleucine biosynthesis III
Plim_1193	PWY-5104	L-isoleucine biosynthesis IV
Plim_1193	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Plim_1195	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Plim_1195	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Plim_1200	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
Plim_1203	PWY-5481	pyruvate fermentation to lactate
Plim_1203	PWY-6901	superpathway of glucose and xylose degradation
Plim_1227	PWY-6871	3-methylbutanol biosynthesis
Plim_1244	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
Plim_1244	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
Plim_1244	PWY-6896	thiamin salvage I
Plim_1244	PWY-6897	thiamin salvage II
Plim_1252	PWY-1042	glycolysis IV (plant cytosol)
Plim_1252	PWY-5484	glycolysis II (from fructose 6-phosphate)
Plim_1252	PWY-6886	1-butanol autotrophic biosynthesis
Plim_1252	PWY-6901	superpathway of glucose and xylose degradation
Plim_1252	PWY-7003	glycerol degradation to butanol
Plim_1264	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Plim_1264	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
Plim_1264	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
Plim_1264	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
Plim_1270	PWY-5316	nicotine biosynthesis
Plim_1270	PWY-7342	superpathway of nicotine biosynthesis
Plim_1285	PWY-1723	formaldehyde oxidation V (H<sub>4</sub>MPT pathway)
Plim_1285	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Plim_1296	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Plim_1316	PWY-6749	CMP-legionaminate biosynthesis I
Plim_1322	PWY-6823	molybdenum cofactor biosynthesis
Plim_1322	PWY-6891	thiazole biosynthesis II (Bacillus)
Plim_1322	PWY-6892	thiazole biosynthesis I (E. coli)
Plim_1322	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
Plim_1323	PWY-6123	inosine-5'-phosphate biosynthesis I
Plim_1323	PWY-7234	inosine-5'-phosphate biosynthesis III
Plim_1342	PWY-6749	CMP-legionaminate biosynthesis I
Plim_1347	PWY-6700	queuosine biosynthesis
Plim_1353	PWY-5667	CDP-diacylglycerol biosynthesis I
Plim_1353	PWY-5981	CDP-diacylglycerol biosynthesis III
Plim_1370	PWY-2941	L-lysine biosynthesis II
Plim_1370	PWY-2942	L-lysine biosynthesis III
Plim_1370	PWY-5097	L-lysine biosynthesis VI
Plim_1373	PWY-5532	adenosine nucleotides degradation IV
Plim_1373	PWY-5723	Rubisco shunt
Plim_1381	PWY-4361	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation
Plim_1381	PWY-7174	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation II
Plim_1395	PWY-5392	reductive TCA cycle II
Plim_1395	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
Plim_1395	PWY-5690	TCA cycle II (plants and fungi)
Plim_1395	PWY-5913	TCA cycle VI (obligate autotrophs)
Plim_1395	PWY-6728	methylaspartate cycle
Plim_1395	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Plim_1395	PWY-7254	TCA cycle VII (acetate-producers)
Plim_1395	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Plim_1406	PWY-5101	L-isoleucine biosynthesis II
Plim_1406	PWY-5103	L-isoleucine biosynthesis III
Plim_1406	PWY-5104	L-isoleucine biosynthesis IV
Plim_1406	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
Plim_1406	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
Plim_1406	PWY-6389	(<i>S</i>)-acetoin biosynthesis
Plim_1406	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Plim_1409	PWY-2723	trehalose degradation V
Plim_1409	PWY-3801	sucrose degradation II (sucrose synthase)
Plim_1409	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
Plim_1409	PWY-5661	GDP-glucose biosynthesis
Plim_1409	PWY-5661-1	Plim_1409|Plim_1409|YP_003629442.1|GeneID:9138104
Plim_1409	PWY-5940	streptomycin biosynthesis
Plim_1409	PWY-5941	glycogen degradation II (eukaryotic)
Plim_1409	PWY-622	starch biosynthesis
Plim_1409	PWY-6731	starch degradation III
Plim_1409	PWY-6737	starch degradation V
Plim_1409	PWY-6749	CMP-legionaminate biosynthesis I
Plim_1409	PWY-7238	sucrose biosynthesis II
Plim_1409	PWY-7343	UDP-glucose biosynthesis
Plim_1410	PWY-5941	glycogen degradation II (eukaryotic)
Plim_1410	PWY-6724	starch degradation II
Plim_1410	PWY-6737	starch degradation V
Plim_1410	PWY-7238	sucrose biosynthesis II
Plim_1421	PWY-5209	methyl-coenzyme M oxidation to CO<sub>2</sub>
Plim_1423	PWY-6123	inosine-5'-phosphate biosynthesis I
Plim_1423	PWY-6124	inosine-5'-phosphate biosynthesis II
Plim_1423	PWY-7234	inosine-5'-phosphate biosynthesis III
Plim_1425	PWY-2941	L-lysine biosynthesis II
Plim_1425	PWY-2942	L-lysine biosynthesis III
Plim_1425	PWY-5097	L-lysine biosynthesis VI
Plim_1425	PWY-6559	spermidine biosynthesis II
Plim_1425	PWY-6562	norspermidine biosynthesis
Plim_1425	PWY-7153	grixazone biosynthesis
Plim_1427	PWY-5344	L-homocysteine biosynthesis
Plim_1455	PWY-5686	UMP biosynthesis
Plim_1498	PWY-1281	sulfoacetaldehyde degradation I
Plim_1498	PWY-5482	pyruvate fermentation to acetate II
Plim_1498	PWY-5485	pyruvate fermentation to acetate IV
Plim_1498	PWY-5497	purine nucleobases degradation II (anaerobic)
Plim_1498	PWY-6637	sulfolactate degradation II
Plim_1521	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
Plim_1521	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
Plim_1521	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
Plim_1537	PWY-5269	cardiolipin biosynthesis II
Plim_1537	PWY-5668	cardiolipin biosynthesis I
Plim_1543	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Plim_1543	PWY-6416	quinate degradation II
Plim_1543	PWY-6707	gallate biosynthesis
Plim_1546	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Plim_1546	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
Plim_1555	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Plim_1555	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
Plim_1555	PWY-5194	siroheme biosynthesis
Plim_1555	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
Plim_1559	PWY-2781	<i>cis</i>-zeatin biosynthesis
Plim_1571	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Plim_1571	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Plim_1572	PWY-6012	acyl carrier protein metabolism I
Plim_1572	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
Plim_1578	PWY-6349	CDP-archaeol biosynthesis
Plim_1586	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
Plim_1586	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
Plim_1589	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Plim_1631	PWY-6654	phosphopantothenate biosynthesis III
Plim_1670	PWY-5737	(5<i>R</i>)-carbapenem carboxylate biosynthesis
Plim_1670	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
Plim_1673	PWY-6012	acyl carrier protein metabolism I
Plim_1673	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
Plim_1691	PWY-622	starch biosynthesis
Plim_1702	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Plim_1716	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
Plim_1716	PWY-7177	UTP and CTP dephosphorylation II
Plim_1716	PWY-7185	UTP and CTP dephosphorylation I
Plim_1717	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
Plim_1717	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
Plim_1742	PWY-6890	4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis
Plim_1754	PWY-5482	pyruvate fermentation to acetate II
Plim_1754	PWY-5485	pyruvate fermentation to acetate IV
Plim_1754	PWY-5497	purine nucleobases degradation II (anaerobic)
Plim_1757	PWY-5437	L-threonine degradation I
Plim_1757	PWY-7013	L-1,2-propanediol degradation
Plim_1759	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Plim_1759	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
Plim_1772	PWY-5278	sulfite oxidation III
Plim_1772	PWY-5340	sulfate activation for sulfonation
Plim_1772	PWY-6683	sulfate reduction III (assimilatory)
Plim_1772	PWY-6932	selenate reduction
Plim_1775	PWY-2941	L-lysine biosynthesis II
Plim_1775	PWY-2942	L-lysine biosynthesis III
Plim_1775	PWY-5097	L-lysine biosynthesis VI
Plim_1776	PWY-2941	L-lysine biosynthesis II
Plim_1776	PWY-2942	L-lysine biosynthesis III
Plim_1776	PWY-5097	L-lysine biosynthesis VI
Plim_1776	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Plim_1776	PWY-6559	spermidine biosynthesis II
Plim_1776	PWY-6562	norspermidine biosynthesis
Plim_1776	PWY-7153	grixazone biosynthesis
Plim_1776	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Plim_1777	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Plim_1777	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
Plim_1777	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
Plim_1792	PWY-6700	queuosine biosynthesis
Plim_1797	PWY-2301	<i>myo</i>-inositol biosynthesis
Plim_1797	PWY-4661	1D-<i>myo</i>-inositol hexakisphosphate biosynthesis III (<i>Spirodela polyrrhiza</i>)
Plim_1797	PWY-6372	1D-<i>myo</i>-inositol hexakisphosphate biosynthesis IV (<i>Dictyostelium</i>)
Plim_1797	PWY-6580	phosphatidylinositol biosynthesis I (bacteria)
Plim_1797	PWY-6664	di-myo-inositol phosphate biosynthesis
Plim_1828	PWY-7303	3-dimethylallyl-4-hydroxybenzoate biosynthesis
Plim_1829	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Plim_1829	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
Plim_1829	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
Plim_1839	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Plim_1839	PWY-6416	quinate degradation II
Plim_1839	PWY-6707	gallate biosynthesis
Plim_1840	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Plim_1853	PWY-6482	diphthamide biosynthesis (archaea)
Plim_1853	PWY-7546	diphthamide biosynthesis (eukaryotes)
Plim_1921	PWY-381	nitrate reduction II (assimilatory)
Plim_1921	PWY-5675	nitrate reduction V (assimilatory)
Plim_1921	PWY-6549	L-glutamine biosynthesis III
Plim_1921	PWY-6963	ammonia assimilation cycle I
Plim_1921	PWY-6964	ammonia assimilation cycle II
Plim_1925	PWY-6614	tetrahydrofolate biosynthesis
Plim_1928	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
Plim_1940	PWY-4983	L-citrulline-nitric oxide cycle
Plim_1940	PWY-4984	urea cycle
Plim_1940	PWY-5	canavanine biosynthesis
Plim_1940	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Plim_1940	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Plim_1942	PWY-6703	preQ<sub>0</sub> biosynthesis
Plim_1943	PWY-6703	preQ<sub>0</sub> biosynthesis
Plim_1971	PWY-6317	galactose degradation I (Leloir pathway)
Plim_1971	PWY-6527	stachyose degradation
Plim_1974	PWY-622	starch biosynthesis
Plim_2002	PWY-4261	glycerol degradation I
Plim_2024	PWY-3461	L-tyrosine biosynthesis II
Plim_2024	PWY-3462	L-phenylalanine biosynthesis II
Plim_2024	PWY-6120	L-tyrosine biosynthesis III
Plim_2024	PWY-6627	salinosporamide A biosynthesis
Plim_2031	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
Plim_2031	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
Plim_2031	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Plim_2031	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
Plim_2031	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
Plim_2031	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
Plim_2031	PWY-7205	CMP phosphorylation
Plim_2031	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
Plim_2031	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Plim_2031	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
Plim_2031	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Plim_2031	PWY-7224	purine deoxyribonucleosides salvage
Plim_2031	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
Plim_2031	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
Plim_2032	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Plim_2032	PWY-5686	UMP biosynthesis
Plim_2032	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Plim_2036	PWY-5958	acridone alkaloid biosynthesis
Plim_2036	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
Plim_2036	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
Plim_2037	PWY-5958	acridone alkaloid biosynthesis
Plim_2037	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
Plim_2037	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
Plim_2040	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Plim_2048	PWY-3461	L-tyrosine biosynthesis II
Plim_2048	PWY-3462	L-phenylalanine biosynthesis II
Plim_2048	PWY-6120	L-tyrosine biosynthesis III
Plim_2048	PWY-6627	salinosporamide A biosynthesis
Plim_2048	PWY-7432	L-phenylalanine biosynthesis III (cytosolic, plants)
Plim_2049	PWY-1042	glycolysis IV (plant cytosol)
Plim_2049	PWY-5484	glycolysis II (from fructose 6-phosphate)
Plim_2049	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Plim_2049	PWY-7003	glycerol degradation to butanol
Plim_2052	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
Plim_2059	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
Plim_2059	PWY-6507	4-deoxy-L-<i>threo</i>-hex-4-enopyranuronate degradation
Plim_2059	PWY-7242	D-fructuronate degradation
Plim_2059	PWY-7310	D-glucosaminate degradation
Plim_2070	PWY-5101	L-isoleucine biosynthesis II
Plim_2070	PWY-6871	3-methylbutanol biosynthesis
Plim_2072	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Plim_2076	PWY-7378	aminopropanol phosphate biosynthesis II
Plim_2149	PWY-5839	menaquinol-7 biosynthesis
Plim_2149	PWY-5844	menaquinol-9 biosynthesis
Plim_2149	PWY-5849	menaquinol-6 biosynthesis
Plim_2149	PWY-5890	menaquinol-10 biosynthesis
Plim_2149	PWY-5891	menaquinol-11 biosynthesis
Plim_2149	PWY-5892	menaquinol-12 biosynthesis
Plim_2149	PWY-5895	menaquinol-13 biosynthesis
Plim_2153	PWY-1042	glycolysis IV (plant cytosol)
Plim_2153	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Plim_2153	PWY-5484	glycolysis II (from fructose 6-phosphate)
Plim_2153	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Plim_2153	PWY-7385	1,3-propanediol biosynthesis (engineered)
Plim_2160	PWY-7247	&beta;-D-glucuronide and D-glucuronate degradation
Plim_2160	PWY-7248	pectin degradation III
Plim_2174	PWY-4381	fatty acid biosynthesis initiation I
Plim_2174	PWY-5743	3-hydroxypropanoate cycle
Plim_2174	PWY-5744	glyoxylate assimilation
Plim_2174	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Plim_2174	PWY-6679	jadomycin biosynthesis
Plim_2174	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Plim_2187	PWY-1622	formaldehyde assimilation I (serine pathway)
Plim_2187	PWY-181	photorespiration
Plim_2187	PWY-2161	folate polyglutamylation
Plim_2187	PWY-2201	folate transformations I
Plim_2187	PWY-3661	glycine betaine degradation I
Plim_2187	PWY-3661-1	glycine betaine degradation II (mammalian)
Plim_2187	PWY-3841	folate transformations II
Plim_2187	PWY-5497	purine nucleobases degradation II (anaerobic)
Plim_2209	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
Plim_2209	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Plim_2209	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
Plim_2209	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
Plim_2209	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
Plim_2209	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
Plim_2216	PWY-4202	arsenate detoxification I (glutaredoxin)
Plim_2216	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
Plim_2216	PWY-6608	guanosine nucleotides degradation III
Plim_2216	PWY-6609	adenine and adenosine salvage III
Plim_2216	PWY-6611	adenine and adenosine salvage V
Plim_2216	PWY-6620	guanine and guanosine salvage
Plim_2216	PWY-6627	salinosporamide A biosynthesis
Plim_2216	PWY-6644	fluoroacetate and fluorothreonine biosynthesis
Plim_2216	PWY-7179	purine deoxyribonucleosides degradation I
Plim_2216	PWY-7179-1	purine deoxyribonucleosides degradation
Plim_2221	PWY-4381	fatty acid biosynthesis initiation I
Plim_2224	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
Plim_2224	PWY-5912	2'-deoxymugineic acid phytosiderophore biosynthesis
Plim_2229	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
Plim_2229	PWY-622	starch biosynthesis
Plim_2259	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
Plim_2259	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
Plim_2268	PWY-5686	UMP biosynthesis
Plim_2269	PWY-5686	UMP biosynthesis
Plim_2277	PWY-6167	flavin biosynthesis II (archaea)
Plim_2277	PWY-6168	flavin biosynthesis III (fungi)
Plim_2277	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
Plim_2281	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
Plim_2286	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
Plim_2286	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
Plim_2287	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
Plim_2287	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
Plim_2288	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Plim_2288	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
Plim_2323	PWY-7206	pyrimidine deoxyribonucleotides dephosphorylation
Plim_2405	PWY-5392	reductive TCA cycle II
Plim_2405	PWY-5537	pyruvate fermentation to acetate V
Plim_2405	PWY-5538	pyruvate fermentation to acetate VI
Plim_2405	PWY-5690	TCA cycle II (plants and fungi)
Plim_2405	PWY-5913	TCA cycle VI (obligate autotrophs)
Plim_2405	PWY-6728	methylaspartate cycle
Plim_2405	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Plim_2405	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Plim_2406	PWY-5392	reductive TCA cycle II
Plim_2406	PWY-5537	pyruvate fermentation to acetate V
Plim_2406	PWY-5538	pyruvate fermentation to acetate VI
Plim_2406	PWY-5690	TCA cycle II (plants and fungi)
Plim_2406	PWY-5913	TCA cycle VI (obligate autotrophs)
Plim_2406	PWY-6728	methylaspartate cycle
Plim_2406	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Plim_2406	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Plim_2407	PWY-5796	malonate decarboxylase activation
Plim_2420	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
Plim_2420	PWY-6549	L-glutamine biosynthesis III
Plim_2420	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
Plim_2420	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
Plim_2423	PWY-6148	tetrahydromethanopterin biosynthesis
Plim_2434	PWY-5674	nitrate reduction IV (dissimilatory)
Plim_2437	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
Plim_2437	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
Plim_2437	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
Plim_2440	PWY-6891	thiazole biosynthesis II (Bacillus)
Plim_2440	PWY-6892	thiazole biosynthesis I (E. coli)
Plim_2440	PWY-7560	methylerythritol phosphate pathway II
Plim_2447	PWY-7560	methylerythritol phosphate pathway II
Plim_2452	PWY-3781	aerobic respiration I (cytochrome c)
Plim_2452	PWY-4302	aerobic respiration III (alternative oxidase pathway)
Plim_2452	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
Plim_2452	PWY-5690	TCA cycle II (plants and fungi)
Plim_2452	PWY-6728	methylaspartate cycle
Plim_2452	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Plim_2452	PWY-7254	TCA cycle VII (acetate-producers)
Plim_2452	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Plim_2453	PWY-3781	aerobic respiration I (cytochrome c)
Plim_2453	PWY-4302	aerobic respiration III (alternative oxidase pathway)
Plim_2453	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
Plim_2453	PWY-5690	TCA cycle II (plants and fungi)
Plim_2453	PWY-6728	methylaspartate cycle
Plim_2453	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Plim_2453	PWY-7254	TCA cycle VII (acetate-producers)
Plim_2453	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Plim_2467	PWY-2201	folate transformations I
Plim_2467	PWY-3841	folate transformations II
Plim_2477	PWY-7533	gliotoxin biosynthesis
Plim_2484	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Plim_2484	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Plim_2548	PWY-2941	L-lysine biosynthesis II
Plim_2548	PWY-2942	L-lysine biosynthesis III
Plim_2548	PWY-5097	L-lysine biosynthesis VI
Plim_2566	PWY-4381	fatty acid biosynthesis initiation I
Plim_2566	PWY-6799	fatty acid biosynthesis (plant mitochondria)
Plim_2566	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Plim_2571	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
Plim_2571	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Plim_2571	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
Plim_2571	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
Plim_2597	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
Plim_2597	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
Plim_2602	PWY-6167	flavin biosynthesis II (archaea)
Plim_2602	PWY-6168	flavin biosynthesis III (fungi)
Plim_2602	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Plim_2603	PWY-1042	glycolysis IV (plant cytosol)
Plim_2603	PWY-1622	formaldehyde assimilation I (serine pathway)
Plim_2603	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
Plim_2603	PWY-5484	glycolysis II (from fructose 6-phosphate)
Plim_2603	PWY-5723	Rubisco shunt
Plim_2603	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Plim_2603	PWY-6886	1-butanol autotrophic biosynthesis
Plim_2603	PWY-6901	superpathway of glucose and xylose degradation
Plim_2603	PWY-7003	glycerol degradation to butanol
Plim_2603	PWY-7124	ethylene biosynthesis V (engineered)
Plim_2603	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
Plim_2611	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
Plim_2611	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
Plim_2613	PWY-1042	glycolysis IV (plant cytosol)
Plim_2613	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Plim_2613	PWY-5484	glycolysis II (from fructose 6-phosphate)
Plim_2613	PWY-6531	mannitol cycle
Plim_2613	PWY-7385	1,3-propanediol biosynthesis (engineered)
Plim_2659	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Plim_2671	PWY-7052	cyanophycin metabolism
Plim_2672	PWY-7052	cyanophycin metabolism
Plim_2674	PWY-5663	tetrahydrobiopterin biosynthesis I
Plim_2674	PWY-5664	tetrahydrobiopterin biosynthesis II
Plim_2674	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
Plim_2674	PWY-6703	preQ<sub>0</sub> biosynthesis
Plim_2674	PWY-6983	tetrahydrobiopterin biosynthesis III
Plim_2674	PWY-7442	drosopterin and aurodrosopterin biosynthesis
Plim_2681	PWY-1042	glycolysis IV (plant cytosol)
Plim_2681	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Plim_2681	PWY-5484	glycolysis II (from fructose 6-phosphate)
Plim_2681	PWY-7385	1,3-propanediol biosynthesis (engineered)
Plim_2684	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Plim_2684	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Plim_2699	PWY-1622	formaldehyde assimilation I (serine pathway)
Plim_2699	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
Plim_2699	PWY-5913	TCA cycle VI (obligate autotrophs)
Plim_2699	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Plim_2699	PWY-6146	<i>Methanobacterium thermoautotrophicum</i> biosynthetic metabolism
Plim_2699	PWY-6549	L-glutamine biosynthesis III
Plim_2699	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
Plim_2699	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
Plim_2699	PWY-7124	ethylene biosynthesis V (engineered)
Plim_2716	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
Plim_2716	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Plim_2716	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
Plim_2716	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
Plim_2723	PWY-6700	queuosine biosynthesis
Plim_2747	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Plim_2758	PWY-6683	sulfate reduction III (assimilatory)
Plim_2766	PWY-4981	L-proline biosynthesis II (from arginine)
Plim_2766	PWY-4984	urea cycle
Plim_2766	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Plim_2768	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Plim_2768	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Plim_2769	PWY-7560	methylerythritol phosphate pathway II
Plim_2775	PWY-7052	cyanophycin metabolism
Plim_2776	PWY-6936	seleno-amino acid biosynthesis
Plim_2811	PWY-5198	factor 420 biosynthesis
Plim_2817	PWY-5350	thiosulfate disproportionation III (rhodanese)
Plim_2835	PWY-3341	L-proline biosynthesis III
Plim_2835	PWY-4981	L-proline biosynthesis II (from arginine)
Plim_2835	PWY-6344	L-ornithine degradation II (Stickland reaction)
Plim_2896	PWY-6938	NADH repair
Plim_2903	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
Plim_2904	PWY-5686	UMP biosynthesis
Plim_2911	PWY-7039	phosphatidate metabolism, as a signaling molecule
Plim_2913	PWY-6906	chitin derivatives degradation
Plim_2913	PWY-7077	<i>N</i>-acetyl-D-galactosamine degradation
Plim_2913	PWY-7395	D-galactosamine and <i>N</i>-acetyl-D-galactosamine degradation
Plim_2914	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
Plim_2918	PWY-6599	guanine and guanosine salvage II
Plim_2918	PWY-6609	adenine and adenosine salvage III
Plim_2918	PWY-6610	adenine and adenosine salvage IV
Plim_2918	PWY-6620	guanine and guanosine salvage
Plim_2957	PWY-3781	aerobic respiration I (cytochrome c)
Plim_2957	PWY-4521	arsenite oxidation I (respiratory)
Plim_2957	PWY-6692	Fe(II) oxidation
Plim_2957	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Plim_2965	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Plim_2980	PWY-6654	phosphopantothenate biosynthesis III
Plim_2984	PWY-6012	acyl carrier protein metabolism I
Plim_2984	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
Plim_3008	PWY-2723	trehalose degradation V
Plim_3008	PWY-6317	galactose degradation I (Leloir pathway)
Plim_3008	PWY-6737	starch degradation V
Plim_3055	PWY-6683	sulfate reduction III (assimilatory)
Plim_3098	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Plim_3117	PWY-5123	<i>trans, trans</i>-farnesyl diphosphate biosynthesis
Plim_3117	PWY-6174	mevalonate pathway II (archaea)
Plim_3117	PWY-6383	mono-<i>trans</i>, poly-<i>cis</i> decaprenyl phosphate biosynthesis
Plim_3117	PWY-6859	<i>all-trans</i>-farnesol biosynthesis
Plim_3117	PWY-7102	bisabolene biosynthesis
Plim_3117	PWY-7391	isoprene biosynthesis II (engineered)
Plim_3117	PWY-7524	mevalonate pathway III (archaea)
Plim_3117	PWY-7560	methylerythritol phosphate pathway II
Plim_3117	PWY-922	mevalonate pathway I
Plim_3121	PWY-5971	palmitate biosynthesis II (bacteria and plants)
Plim_3121	PWY-5973	<i>cis</i>-vaccenate biosynthesis
Plim_3121	PWY-5989	stearate biosynthesis II (bacteria and plants)
Plim_3121	PWY-5994	palmitate biosynthesis I (animals and fungi)
Plim_3121	PWY-6113	superpathway of mycolate biosynthesis
Plim_3121	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
Plim_3121	PWY-6519	8-amino-7-oxononanoate biosynthesis I
Plim_3121	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Plim_3121	PWYG-321	mycolate biosynthesis
Plim_3123	PWY-5367	petroselinate biosynthesis
Plim_3123	PWY-5971	palmitate biosynthesis II (bacteria and plants)
Plim_3123	PWY-5973	<i>cis</i>-vaccenate biosynthesis
Plim_3123	PWY-5989	stearate biosynthesis II (bacteria and plants)
Plim_3123	PWY-5994	palmitate biosynthesis I (animals and fungi)
Plim_3123	PWY-6113	superpathway of mycolate biosynthesis
Plim_3123	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
Plim_3123	PWY-6519	8-amino-7-oxononanoate biosynthesis I
Plim_3123	PWY-6951	Plim_3123|Plim_3123|YP_003631137.1|GeneID:9139837
Plim_3123	PWY-7053	docosahexaenoate biosynthesis I (lower eukaryotes)
Plim_3123	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Plim_3123	PWYG-321	mycolate biosynthesis
Plim_3124	PWY-5971	palmitate biosynthesis II (bacteria and plants)
Plim_3124	PWY-5973	<i>cis</i>-vaccenate biosynthesis
Plim_3124	PWY-5989	stearate biosynthesis II (bacteria and plants)
Plim_3124	PWY-5994	palmitate biosynthesis I (animals and fungi)
Plim_3124	PWY-6113	superpathway of mycolate biosynthesis
Plim_3124	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
Plim_3124	PWY-6519	8-amino-7-oxononanoate biosynthesis I
Plim_3124	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Plim_3124	PWYG-321	mycolate biosynthesis
Plim_3159	PWY-5491	diethylphosphate degradation
Plim_3177	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
Plim_3177	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Plim_3177	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
Plim_3177	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
Plim_3177	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Plim_3177	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Plim_3177	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
Plim_3177	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
Plim_3202	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Plim_3202	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
Plim_3208	PWY-4041	&gamma;-glutamyl cycle
Plim_3208	PWY-5826	hypoglycin biosynthesis
Plim_3236	PWY-5101	L-isoleucine biosynthesis II
Plim_3236	PWY-5103	L-isoleucine biosynthesis III
Plim_3236	PWY-5104	L-isoleucine biosynthesis IV
Plim_3236	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Plim_3248	PWY-3221	dTDP-L-rhamnose biosynthesis II
Plim_3248	PWY-6808	dTDP-D-forosamine biosynthesis
Plim_3248	PWY-6942	dTDP-D-desosamine biosynthesis
Plim_3248	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
Plim_3248	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
Plim_3248	PWY-6974	dTDP-L-olivose biosynthesis
Plim_3248	PWY-6976	dTDP-L-mycarose biosynthesis
Plim_3248	PWY-7104	dTDP-L-megosamine biosynthesis
Plim_3248	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
Plim_3248	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
Plim_3248	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
Plim_3248	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
Plim_3248	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
Plim_3248	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
Plim_3248	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
Plim_3248	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
Plim_3256	PWY-6936	seleno-amino acid biosynthesis
Plim_3274	PWY-1042	glycolysis IV (plant cytosol)
Plim_3274	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
Plim_3274	PWY-5484	glycolysis II (from fructose 6-phosphate)
Plim_3274	PWY-5723	Rubisco shunt
Plim_3274	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Plim_3274	PWY-6886	1-butanol autotrophic biosynthesis
Plim_3274	PWY-6901	superpathway of glucose and xylose degradation
Plim_3274	PWY-7003	glycerol degradation to butanol
Plim_3274	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
Plim_3274	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
Plim_3278	PWY-2941	L-lysine biosynthesis II
Plim_3278	PWY-2942	L-lysine biosynthesis III
Plim_3278	PWY-5097	L-lysine biosynthesis VI
Plim_3297	PWY-5971	palmitate biosynthesis II (bacteria and plants)
Plim_3297	PWY-5973	<i>cis</i>-vaccenate biosynthesis
Plim_3297	PWY-5989	stearate biosynthesis II (bacteria and plants)
Plim_3297	PWY-5994	palmitate biosynthesis I (animals and fungi)
Plim_3297	PWY-6113	superpathway of mycolate biosynthesis
Plim_3297	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
Plim_3297	PWY-6519	8-amino-7-oxononanoate biosynthesis I
Plim_3297	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Plim_3297	PWYG-321	mycolate biosynthesis
Plim_3309	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
Plim_3309	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
Plim_3318	PWY-6823	molybdenum cofactor biosynthesis
Plim_3319	PWY-6784	cellulose and hemicellulose degradation (cellulolosome)
Plim_3323	PWY-4381	fatty acid biosynthesis initiation I
Plim_3324	PWY-5971	palmitate biosynthesis II (bacteria and plants)
Plim_3324	PWY-5973	<i>cis</i>-vaccenate biosynthesis
Plim_3324	PWY-5989	stearate biosynthesis II (bacteria and plants)
Plim_3324	PWY-5994	palmitate biosynthesis I (animals and fungi)
Plim_3324	PWY-6113	superpathway of mycolate biosynthesis
Plim_3324	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
Plim_3324	PWY-6519	8-amino-7-oxononanoate biosynthesis I
Plim_3324	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Plim_3324	PWYG-321	mycolate biosynthesis
Plim_3343	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Plim_3362	PWY-6823	molybdenum cofactor biosynthesis
Plim_3364	PWY-7560	methylerythritol phosphate pathway II
Plim_3382	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
Plim_3382	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
Plim_3382	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
Plim_3383	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
Plim_3383	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
Plim_3411	PWY-5738	GDP-6-deoxy-D-talose biosynthesis
Plim_3411	PWY-5739	GDP-D-perosamine biosynthesis
Plim_3411	PWY-5740	GDP-L-colitose biosynthesis
Plim_3411	PWY-66	GDP-L-fucose biosynthesis I (from GDP-D-mannose)
Plim_3420	PWY-4261	glycerol degradation I
Plim_3436	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
Plim_3436	PWY-2201	folate transformations I
Plim_3436	PWY-3841	folate transformations II
Plim_3436	PWY-5030	L-histidine degradation III
Plim_3436	PWY-5497	purine nucleobases degradation II (anaerobic)
Plim_3436	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
Plim_3455	PWY-7560	methylerythritol phosphate pathway II
Plim_3476	PWY-6749	CMP-legionaminate biosynthesis I
Plim_3486	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Plim_3493	PWY-5941	glycogen degradation II (eukaryotic)
Plim_3493	PWY-622	starch biosynthesis
Plim_3493	PWY-6731	starch degradation III
Plim_3493	PWY-6737	starch degradation V
Plim_3493	PWY-7238	sucrose biosynthesis II
Plim_3497	PWY-6854	ethylene biosynthesis III (microbes)
Plim_3508	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
Plim_3508	PWY-6596	adenosine nucleotides degradation I
Plim_3508	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
Plim_3519	PWY-1723	formaldehyde oxidation V (H<sub>4</sub>MPT pathway)
Plim_3519	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Plim_3532	PWY-6891	thiazole biosynthesis II (Bacillus)
Plim_3532	PWY-6892	thiazole biosynthesis I (E. coli)
Plim_3532	PWY-7560	methylerythritol phosphate pathway II
Plim_3544	PWY-5057	L-valine degradation II
Plim_3544	PWY-5076	L-leucine degradation III
Plim_3544	PWY-5078	L-isoleucine degradation II
Plim_3544	PWY-5101	L-isoleucine biosynthesis II
Plim_3544	PWY-5103	L-isoleucine biosynthesis III
Plim_3544	PWY-5104	L-isoleucine biosynthesis IV
Plim_3544	PWY-5108	L-isoleucine biosynthesis V
Plim_3582	PWY-3221	dTDP-L-rhamnose biosynthesis II
Plim_3582	PWY-6808	dTDP-D-forosamine biosynthesis
Plim_3582	PWY-6942	dTDP-D-desosamine biosynthesis
Plim_3582	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
Plim_3582	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
Plim_3582	PWY-6974	dTDP-L-olivose biosynthesis
Plim_3582	PWY-6976	dTDP-L-mycarose biosynthesis
Plim_3582	PWY-7104	dTDP-L-megosamine biosynthesis
Plim_3582	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
Plim_3582	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
Plim_3582	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
Plim_3582	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
Plim_3582	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
Plim_3582	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
Plim_3582	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
Plim_3582	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
Plim_3599	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Plim_3600	PWY-6167	flavin biosynthesis II (archaea)
Plim_3600	PWY-6168	flavin biosynthesis III (fungi)
Plim_3603	PWY-6749	CMP-legionaminate biosynthesis I
Plim_3615	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
Plim_3633	PWY-6891	thiazole biosynthesis II (Bacillus)
Plim_3633	PWY-6892	thiazole biosynthesis I (E. coli)
Plim_3653	PWY-6605	adenine and adenosine salvage II
Plim_3653	PWY-6610	adenine and adenosine salvage IV
Plim_3696	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
Plim_3696	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Plim_3696	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
Plim_3696	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
Plim_3714	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
Plim_3714	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
Plim_3714	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
Plim_3714	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
Plim_3736	PWY-7346	UDP-&alpha;-D-glucuronate biosynthesis (from UDP-glucose)
Plim_3746	PWY-6834	spermidine biosynthesis III
Plim_3766	PWY-5303	thiosulfate oxidation II (via tetrathionate)
Plim_3771	PWY-5101	L-isoleucine biosynthesis II
Plim_3771	PWY-5103	L-isoleucine biosynthesis III
Plim_3771	PWY-5104	L-isoleucine biosynthesis IV
Plim_3771	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Plim_3789	PWY-40	putrescine biosynthesis I
Plim_3789	PWY-43	putrescine biosynthesis II
Plim_3789	PWY-6305	putrescine biosynthesis IV
Plim_3789	PWY-6834	spermidine biosynthesis III
Plim_3794	PWY-6823	molybdenum cofactor biosynthesis
Plim_3794	PWY-6891	thiazole biosynthesis II (Bacillus)
Plim_3794	PWY-6892	thiazole biosynthesis I (E. coli)
Plim_3794	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
Plim_3831	PWY-6123	inosine-5'-phosphate biosynthesis I
Plim_3831	PWY-6124	inosine-5'-phosphate biosynthesis II
Plim_3831	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Plim_3831	PWY-7234	inosine-5'-phosphate biosynthesis III
Plim_3832	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Plim_3832	PWY-5723	Rubisco shunt
Plim_3848	PWY-6123	inosine-5'-phosphate biosynthesis I
Plim_3848	PWY-6124	inosine-5'-phosphate biosynthesis II
Plim_3848	PWY-7234	inosine-5'-phosphate biosynthesis III
Plim_3854	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Plim_3854	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
Plim_3854	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
Plim_3886	PWY-5988	wound-induced proteolysis I
Plim_3886	PWY-6018	seed germination protein turnover
Plim_3893	PWY-5971	palmitate biosynthesis II (bacteria and plants)
Plim_3893	PWY-5973	<i>cis</i>-vaccenate biosynthesis
Plim_3893	PWY-5989	stearate biosynthesis II (bacteria and plants)
Plim_3893	PWY-6113	superpathway of mycolate biosynthesis
Plim_3893	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
Plim_3893	PWY-6519	8-amino-7-oxononanoate biosynthesis I
Plim_3893	PWY-7096	triclosan resistance
Plim_3893	PWYG-321	mycolate biosynthesis
Plim_3900	PWY-7396	butanol and isobutanol biosynthesis (engineered)
Plim_3905	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
Plim_3905	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
Plim_3905	PWY-6268	adenosylcobalamin salvage from cobalamin
Plim_3905	PWY-6269	adenosylcobalamin salvage from cobinamide II
Plim_3950	PWY-3961	phosphopantothenate biosynthesis II
Plim_3990	PWY-3781	aerobic respiration I (cytochrome c)
Plim_3990	PWY-4521	arsenite oxidation I (respiratory)
Plim_3990	PWY-6692	Fe(II) oxidation
Plim_3990	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Plim_3994	PWY-3801	sucrose degradation II (sucrose synthase)
Plim_3994	PWY-5054	sorbitol biosynthesis I
Plim_3994	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
Plim_3994	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
Plim_3994	PWY-5659	GDP-mannose biosynthesis
Plim_3994	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Plim_3994	PWY-621	sucrose degradation III (sucrose invertase)
Plim_3994	PWY-622	starch biosynthesis
Plim_3994	PWY-6531	mannitol cycle
Plim_3994	PWY-6981	chitin biosynthesis
Plim_3994	PWY-7238	sucrose biosynthesis II
Plim_3994	PWY-7347	sucrose biosynthesis III
Plim_3994	PWY-7385	1,3-propanediol biosynthesis (engineered)
Plim_3995	PWY-5097	L-lysine biosynthesis VI
Plim_3996	PWY-2201	folate transformations I
Plim_3996	PWY-3841	folate transformations II
Plim_4089	PWY-6785	hydrogen production VIII
Plim_4098	PWY-5344	L-homocysteine biosynthesis
Plim_4098	PWY-7174	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation II
Plim_4100	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Plim_4100	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Plim_4106	PWY-5155	&beta;-alanine biosynthesis III
Plim_4118	PWY-6672	<i>cis</i>-genanyl-CoA degradation
Plim_4118	PWY-7118	chitin degradation to ethanol
Plim_4131	PWY-2582	brassinosteroid biosynthesis II
Plim_4131	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
Plim_4131	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
Plim_4131	PWY-6948	sitosterol degradation to androstenedione
Plim_4131	PWY-699	brassinosteroid biosynthesis I
Plim_4131	PWY-7299	progesterone biosynthesis
Plim_4163	PWY-4983	L-citrulline-nitric oxide cycle
Plim_4163	PWY-4984	urea cycle
Plim_4163	PWY-5	canavanine biosynthesis
Plim_4163	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Plim_4163	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Plim_4193	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
Plim_4193	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
Plim_4195	PWY-5737	(5<i>R</i>)-carbapenem carboxylate biosynthesis
Plim_4195	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
Plim_4226	PWY-4041	&gamma;-glutamyl cycle
Plim_4232	PWY-7158	L-phenylalanine degradation V
