Pnap_0019	PWY-6890	4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis
Pnap_0022	PWY-6891	thiazole biosynthesis II (Bacillus)
Pnap_0022	PWY-6892	thiazole biosynthesis I (E. coli)
Pnap_0023	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
Pnap_0023	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
Pnap_0023	PWY-6897	thiamin salvage II
Pnap_0023	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
Pnap_0023	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
Pnap_0023	PWY-7353	4-methyl-5(&beta;-hydroxyethyl)thiazole salvage (yeast)
Pnap_0023	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
Pnap_0035	PWY-5169	cyanurate degradation
Pnap_0035	PWY-5703	urea degradation I
Pnap_0035	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
Pnap_0036	PWY-5169	cyanurate degradation
Pnap_0036	PWY-5703	urea degradation I
Pnap_0046	PWY-5530	sorbitol biosynthesis II
Pnap_0046	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Pnap_0056	PWY-5392	reductive TCA cycle II
Pnap_0056	PWY-5537	pyruvate fermentation to acetate V
Pnap_0056	PWY-5538	pyruvate fermentation to acetate VI
Pnap_0056	PWY-5690	TCA cycle II (plants and fungi)
Pnap_0056	PWY-5913	TCA cycle VI (obligate autotrophs)
Pnap_0056	PWY-6728	methylaspartate cycle
Pnap_0056	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Pnap_0056	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Pnap_0069	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Pnap_0069	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Pnap_0070	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
Pnap_0070	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
Pnap_0070	PWY-6268	adenosylcobalamin salvage from cobalamin
Pnap_0070	PWY-6269	adenosylcobalamin salvage from cobinamide II
Pnap_0102	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
Pnap_0117	PWY-2201	folate transformations I
Pnap_0117	PWY-3841	folate transformations II
Pnap_0123	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Pnap_0123	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Pnap_0131	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
Pnap_0135	PWY-6654	phosphopantothenate biosynthesis III
Pnap_0147	PWY-5057	L-valine degradation II
Pnap_0147	PWY-5076	L-leucine degradation III
Pnap_0147	PWY-5078	L-isoleucine degradation II
Pnap_0147	PWY-5101	L-isoleucine biosynthesis II
Pnap_0147	PWY-5103	L-isoleucine biosynthesis III
Pnap_0147	PWY-5104	L-isoleucine biosynthesis IV
Pnap_0147	PWY-5108	L-isoleucine biosynthesis V
Pnap_0168	PWY-5686	UMP biosynthesis
Pnap_0171	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
Pnap_0180	PWY-3722	glycine betaine biosynthesis II (Gram-positive bacteria)
Pnap_0180	PWY-7494	choline degradation IV
Pnap_0192	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Pnap_0192	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
Pnap_0197	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
Pnap_0197	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
Pnap_0219	PWY-5344	L-homocysteine biosynthesis
Pnap_0219	PWY-7174	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation II
Pnap_0232	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
Pnap_0242	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
Pnap_0242	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
Pnap_0242	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
Pnap_0243	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
Pnap_0243	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
Pnap_0253	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Pnap_0255	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Pnap_0272	PWY-6478	GDP-D-<i>glycero</i>-&alpha;-D-<i>manno</i>-heptose biosynthesis
Pnap_0280	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
Pnap_0282	PWY-7335	UDP-<i>N</i>-acetyl-&alpha;-D-mannosaminouronate biosynthesis
Pnap_0293	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Pnap_0293	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Pnap_0297	PWY-2201	folate transformations I
Pnap_0297	PWY-5497	purine nucleobases degradation II (anaerobic)
Pnap_0320	PWY-6700	queuosine biosynthesis
Pnap_0321	PWY-6700	queuosine biosynthesis
Pnap_0327	PWY-3341	L-proline biosynthesis III
Pnap_0327	PWY-4981	L-proline biosynthesis II (from arginine)
Pnap_0327	PWY-6344	L-ornithine degradation II (Stickland reaction)
Pnap_0328	PWY-4261	glycerol degradation I
Pnap_0329	PWY-4261	glycerol degradation I
Pnap_0329	PWY-6118	glycerol-3-phosphate shuttle
Pnap_0329	PWY-6952	glycerophosphodiester degradation
Pnap_0350	PWY-6803	phosphatidylcholine acyl editing
Pnap_0350	PWY-7409	phospholipid remodeling (phosphatidylethanolamine, yeast)
Pnap_0350	PWY-7416	phospholipid remodeling (phosphatidylcholine, yeast)
Pnap_0350	PWY-7417	phospholipid remodeling (phosphatidate, yeast)
Pnap_0354	PWY-5691	urate degradation to allantoin I
Pnap_0354	PWY-7394	urate degradation to allantoin II
Pnap_0356	PWY-5691	urate degradation to allantoin I
Pnap_0356	PWY-7394	urate degradation to allantoin II
Pnap_0363	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
Pnap_0363	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
Pnap_0394	PWY-6167	flavin biosynthesis II (archaea)
Pnap_0456	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
Pnap_0456	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Pnap_0456	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
Pnap_0456	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
Pnap_0461	PWY-6832	2-aminoethylphosphonate degradation II
Pnap_0471	PWY-4381	fatty acid biosynthesis initiation I
Pnap_0471	PWY-5743	3-hydroxypropanoate cycle
Pnap_0471	PWY-5744	glyoxylate assimilation
Pnap_0471	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Pnap_0471	PWY-6679	jadomycin biosynthesis
Pnap_0471	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Pnap_0477	PWY-5074	mevalonate degradation
Pnap_0489	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
Pnap_0491	PWY-2201	folate transformations I
Pnap_0491	PWY-3841	folate transformations II
Pnap_0513	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
Pnap_0517	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
Pnap_0517	PWY-6148	tetrahydromethanopterin biosynthesis
Pnap_0517	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
Pnap_0517	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
Pnap_0533	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
Pnap_0536	PWY-6749	CMP-legionaminate biosynthesis I
Pnap_0543	PWY-6823	molybdenum cofactor biosynthesis
Pnap_0543	PWY-6891	thiazole biosynthesis II (Bacillus)
Pnap_0543	PWY-6892	thiazole biosynthesis I (E. coli)
Pnap_0543	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
Pnap_0562	PWY-6936	seleno-amino acid biosynthesis
Pnap_0572	PWY-5674	nitrate reduction IV (dissimilatory)
Pnap_0598	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Pnap_0598	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Pnap_0636	PWY-6703	preQ<sub>0</sub> biosynthesis
Pnap_0639	PWY-5381	pyridine nucleotide cycling (plants)
Pnap_0639	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
Pnap_0639	PWY-6596	adenosine nucleotides degradation I
Pnap_0639	PWY-6606	guanosine nucleotides degradation II
Pnap_0639	PWY-6607	guanosine nucleotides degradation I
Pnap_0639	PWY-6608	guanosine nucleotides degradation III
Pnap_0639	PWY-7185	UTP and CTP dephosphorylation I
Pnap_0641	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
Pnap_0641	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
Pnap_0641	PWY-6269	adenosylcobalamin salvage from cobinamide II
Pnap_0642	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
Pnap_0642	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
Pnap_0642	PWY-6269	adenosylcobalamin salvage from cobinamide II
Pnap_0653	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
Pnap_0654	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Pnap_0654	PWY-5723	Rubisco shunt
Pnap_0655	PWY-3801	sucrose degradation II (sucrose synthase)
Pnap_0655	PWY-5054	sorbitol biosynthesis I
Pnap_0655	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
Pnap_0655	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
Pnap_0655	PWY-5659	GDP-mannose biosynthesis
Pnap_0655	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Pnap_0655	PWY-621	sucrose degradation III (sucrose invertase)
Pnap_0655	PWY-622	starch biosynthesis
Pnap_0655	PWY-6531	mannitol cycle
Pnap_0655	PWY-6981	chitin biosynthesis
Pnap_0655	PWY-7238	sucrose biosynthesis II
Pnap_0655	PWY-7347	sucrose biosynthesis III
Pnap_0655	PWY-7385	1,3-propanediol biosynthesis (engineered)
Pnap_0660	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
Pnap_0660	PWY-5912	2'-deoxymugineic acid phytosiderophore biosynthesis
Pnap_0669	PWY-2941	L-lysine biosynthesis II
Pnap_0669	PWY-2942	L-lysine biosynthesis III
Pnap_0669	PWY-5097	L-lysine biosynthesis VI
Pnap_0678	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Pnap_0679	PWY-6164	3-dehydroquinate biosynthesis I
Pnap_0694	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Pnap_0694	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Pnap_0710	PWY-5663	tetrahydrobiopterin biosynthesis I
Pnap_0710	PWY-5664	tetrahydrobiopterin biosynthesis II
Pnap_0710	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
Pnap_0710	PWY-6703	preQ<sub>0</sub> biosynthesis
Pnap_0710	PWY-6983	tetrahydrobiopterin biosynthesis III
Pnap_0710	PWY-7442	drosopterin and aurodrosopterin biosynthesis
Pnap_0713	PWY-3781	aerobic respiration I (cytochrome c)
Pnap_0713	PWY-6692	Fe(II) oxidation
Pnap_0713	PWY-7082	ammonia oxidation IV (autotrophic ammonia oxidizers)
Pnap_0713	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Pnap_0731	PWY-6420	pyrroloquinoline quinone biosynthesis
Pnap_0739	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Pnap_0753	PWY-5669	phosphatidylethanolamine biosynthesis I
Pnap_0776	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Pnap_0778	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Pnap_0778	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Pnap_0781	PWY-5839	menaquinol-7 biosynthesis
Pnap_0781	PWY-5844	menaquinol-9 biosynthesis
Pnap_0781	PWY-5849	menaquinol-6 biosynthesis
Pnap_0781	PWY-5890	menaquinol-10 biosynthesis
Pnap_0781	PWY-5891	menaquinol-11 biosynthesis
Pnap_0781	PWY-5892	menaquinol-12 biosynthesis
Pnap_0781	PWY-5895	menaquinol-13 biosynthesis
Pnap_0811	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
Pnap_0815	PWY-7206	pyrimidine deoxyribonucleotides dephosphorylation
Pnap_0867	PWY-1361	benzoyl-CoA degradation I (aerobic)
Pnap_0867	PWY-2361	3-oxoadipate degradation
Pnap_0867	PWY-6185	4-methylcatechol degradation (<i>ortho</i> cleavage)
Pnap_0879	PWY-3781	aerobic respiration I (cytochrome c)
Pnap_0879	PWY-4521	arsenite oxidation I (respiratory)
Pnap_0879	PWY-6692	Fe(II) oxidation
Pnap_0879	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Pnap_0900	PWY-7560	methylerythritol phosphate pathway II
Pnap_0908	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
Pnap_0908	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
Pnap_0908	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
Pnap_0912	PWY-5663	tetrahydrobiopterin biosynthesis I
Pnap_0912	PWY-5664	tetrahydrobiopterin biosynthesis II
Pnap_0912	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
Pnap_0912	PWY-6703	preQ<sub>0</sub> biosynthesis
Pnap_0912	PWY-6983	tetrahydrobiopterin biosynthesis III
Pnap_0912	PWY-7442	drosopterin and aurodrosopterin biosynthesis
Pnap_0927	PWY-1622	formaldehyde assimilation I (serine pathway)
Pnap_0927	PWY-5484	glycolysis II (from fructose 6-phosphate)
Pnap_0931	PWY-5667	CDP-diacylglycerol biosynthesis I
Pnap_0931	PWY-5981	CDP-diacylglycerol biosynthesis III
Pnap_0934	PWY-6654	phosphopantothenate biosynthesis III
Pnap_0936	PWY-5155	&beta;-alanine biosynthesis III
Pnap_0937	PWY-5316	nicotine biosynthesis
Pnap_0937	PWY-5381	pyridine nucleotide cycling (plants)
Pnap_0937	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
Pnap_0937	PWY-7342	superpathway of nicotine biosynthesis
Pnap_0938	PWY-5316	nicotine biosynthesis
Pnap_0938	PWY-7342	superpathway of nicotine biosynthesis
Pnap_0939	PWY-5958	acridone alkaloid biosynthesis
Pnap_0939	PWY-6543	4-aminobenzoate biosynthesis
Pnap_0939	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
Pnap_0939	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
Pnap_0939	PWY-6722	candicidin biosynthesis
Pnap_0946	PWY-5794	malonate degradation I (biotin-independent)
Pnap_0946	PWY-6060	malonate degradation II (biotin-dependent)
Pnap_0947	PWY-5796	malonate decarboxylase activation
Pnap_0949	PWY-4381	fatty acid biosynthesis initiation I
Pnap_0949	PWY-5743	3-hydroxypropanoate cycle
Pnap_0949	PWY-5744	glyoxylate assimilation
Pnap_0949	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Pnap_0949	PWY-6060	malonate degradation II (biotin-dependent)
Pnap_0949	PWY-6679	jadomycin biosynthesis
Pnap_0949	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Pnap_0950	PWY-6060	malonate degradation II (biotin-dependent)
Pnap_0951	PWY-5796	malonate decarboxylase activation
Pnap_0952	PWY-4381	fatty acid biosynthesis initiation I
Pnap_0952	PWY-6799	fatty acid biosynthesis (plant mitochondria)
Pnap_0952	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Pnap_0956	PWY-5316	nicotine biosynthesis
Pnap_0956	PWY-7342	superpathway of nicotine biosynthesis
Pnap_0974	PWY-5704	urea degradation II
Pnap_0975	PWY-5704	urea degradation II
Pnap_0977	PWY-5704	urea degradation II
Pnap_1005	PWY-7052	cyanophycin metabolism
Pnap_1006	PWY-7052	cyanophycin metabolism
Pnap_1010	PWY-1281	sulfoacetaldehyde degradation I
Pnap_1010	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
Pnap_1010	PWY-5482	pyruvate fermentation to acetate II
Pnap_1010	PWY-5485	pyruvate fermentation to acetate IV
Pnap_1010	PWY-5497	purine nucleobases degradation II (anaerobic)
Pnap_1010	PWY-6637	sulfolactate degradation II
Pnap_1010	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
Pnap_1034	PWY-5497	purine nucleobases degradation II (anaerobic)
Pnap_1034	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
Pnap_1034	PWY-6538	caffeine degradation III (bacteria, via demethylation)
Pnap_1034	PWY-6596	adenosine nucleotides degradation I
Pnap_1034	PWY-6606	guanosine nucleotides degradation II
Pnap_1034	PWY-6607	guanosine nucleotides degradation I
Pnap_1034	PWY-6608	guanosine nucleotides degradation III
Pnap_1034	PWY-6999	theophylline degradation
Pnap_1035	PWY-5497	purine nucleobases degradation II (anaerobic)
Pnap_1035	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
Pnap_1035	PWY-6538	caffeine degradation III (bacteria, via demethylation)
Pnap_1035	PWY-6596	adenosine nucleotides degradation I
Pnap_1035	PWY-6606	guanosine nucleotides degradation II
Pnap_1035	PWY-6607	guanosine nucleotides degradation I
Pnap_1035	PWY-6608	guanosine nucleotides degradation III
Pnap_1035	PWY-6999	theophylline degradation
Pnap_1040	PWY-6610	adenine and adenosine salvage IV
Pnap_1045	PWY-6703	preQ<sub>0</sub> biosynthesis
Pnap_1047	PWY-5497	purine nucleobases degradation II (anaerobic)
Pnap_1047	PWY-6606	guanosine nucleotides degradation II
Pnap_1047	PWY-6608	guanosine nucleotides degradation III
Pnap_1047	PWY-7442	drosopterin and aurodrosopterin biosynthesis
Pnap_1049	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
Pnap_1059	PWY-3821	galactose degradation III
Pnap_1059	PWY-6317	galactose degradation I (Leloir pathway)
Pnap_1059	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
Pnap_1059	PWY-6527	stachyose degradation
Pnap_1059	PWY-7328	superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
Pnap_1059	PWY-7344	UDP-D-galactose biosynthesis
Pnap_1067	PWY-5484	glycolysis II (from fructose 6-phosphate)
Pnap_1081	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Pnap_1081	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Pnap_1082	PWY-4983	L-citrulline-nitric oxide cycle
Pnap_1082	PWY-4984	urea cycle
Pnap_1082	PWY-5	canavanine biosynthesis
Pnap_1082	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Pnap_1082	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Pnap_1089	PWY-2161	folate polyglutamylation
Pnap_1092	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Pnap_1092	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
Pnap_1092	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
Pnap_1092	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
Pnap_1094	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Pnap_1102	PWY-5941	glycogen degradation II (eukaryotic)
Pnap_1102	PWY-6724	starch degradation II
Pnap_1102	PWY-6737	starch degradation V
Pnap_1102	PWY-7238	sucrose biosynthesis II
Pnap_1104	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
Pnap_1104	PWY-622	starch biosynthesis
Pnap_1105	PWY-5941	glycogen degradation II (eukaryotic)
Pnap_1105	PWY-622	starch biosynthesis
Pnap_1105	PWY-6731	starch degradation III
Pnap_1105	PWY-6737	starch degradation V
Pnap_1105	PWY-7238	sucrose biosynthesis II
Pnap_1106	PWY-622	starch biosynthesis
Pnap_1107	PWY-622	starch biosynthesis
Pnap_1108	PWY-6749	CMP-legionaminate biosynthesis I
Pnap_1117	PWY-6134	L-tyrosine biosynthesis IV
Pnap_1117	PWY-7158	L-phenylalanine degradation V
Pnap_1123	PWY-6871	3-methylbutanol biosynthesis
Pnap_1130	PWY-6499	D-glucarate degradation II
Pnap_1155	PWY-2781	<i>cis</i>-zeatin biosynthesis
Pnap_1183	PWY-1042	glycolysis IV (plant cytosol)
Pnap_1183	PWY-1622	formaldehyde assimilation I (serine pathway)
Pnap_1183	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
Pnap_1183	PWY-5484	glycolysis II (from fructose 6-phosphate)
Pnap_1183	PWY-5723	Rubisco shunt
Pnap_1183	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Pnap_1183	PWY-6886	1-butanol autotrophic biosynthesis
Pnap_1183	PWY-6901	superpathway of glucose and xylose degradation
Pnap_1183	PWY-7003	glycerol degradation to butanol
Pnap_1183	PWY-7124	ethylene biosynthesis V (engineered)
Pnap_1183	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
Pnap_1184	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
Pnap_1184	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
Pnap_1185	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
Pnap_1185	PWY-7177	UTP and CTP dephosphorylation II
Pnap_1185	PWY-7185	UTP and CTP dephosphorylation I
Pnap_1188	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
Pnap_1188	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Pnap_1188	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
Pnap_1188	PWY-7206	pyrimidine deoxyribonucleotides dephosphorylation
Pnap_1196	PWY-2941	L-lysine biosynthesis II
Pnap_1196	PWY-2942	L-lysine biosynthesis III
Pnap_1196	PWY-5097	L-lysine biosynthesis VI
Pnap_1226	PWY-723	alkylnitronates degradation
Pnap_1229	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
Pnap_1230	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
Pnap_1230	PWY-3162	L-tryptophan degradation V (side chain pathway)
Pnap_1230	PWY-5057	L-valine degradation II
Pnap_1230	PWY-5076	L-leucine degradation III
Pnap_1230	PWY-5078	L-isoleucine degradation II
Pnap_1230	PWY-5079	L-phenylalanine degradation III
Pnap_1230	PWY-5082	L-methionine degradation III
Pnap_1230	PWY-5480	pyruvate fermentation to ethanol I
Pnap_1230	PWY-5486	pyruvate fermentation to ethanol II
Pnap_1230	PWY-5751	phenylethanol biosynthesis
Pnap_1230	PWY-6028	acetoin degradation
Pnap_1230	PWY-6313	serotonin degradation
Pnap_1230	PWY-6333	acetaldehyde biosynthesis I
Pnap_1230	PWY-6342	noradrenaline and adrenaline degradation
Pnap_1230	PWY-6587	pyruvate fermentation to ethanol III
Pnap_1230	PWY-6802	salidroside biosynthesis
Pnap_1230	PWY-6871	3-methylbutanol biosynthesis
Pnap_1230	PWY-7013	L-1,2-propanediol degradation
Pnap_1230	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Pnap_1230	PWY-7118	chitin degradation to ethanol
Pnap_1230	PWY-7396	butanol and isobutanol biosynthesis (engineered)
Pnap_1230	PWY-7557	dehydrodiconiferyl alcohol degradation
Pnap_1255	PWY-6825	phosphatidylcholine biosynthesis V
Pnap_1308	PWY-6840	homoglutathione biosynthesis
Pnap_1308	PWY-7255	ergothioneine biosynthesis I (bacteria)
Pnap_1326	PWY-6523	nitrite-dependent anaerobic methane oxidation
Pnap_1326	PWY-6748	nitrate reduction VII (denitrification)
Pnap_1326	PWY-7084	nitrifier denitrification
Pnap_1328	PWY-3781	aerobic respiration I (cytochrome c)
Pnap_1328	PWY-4521	arsenite oxidation I (respiratory)
Pnap_1328	PWY-6692	Fe(II) oxidation
Pnap_1328	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Pnap_1351	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Pnap_1380	PWY-2301	<i>myo</i>-inositol biosynthesis
Pnap_1380	PWY-4702	phytate degradation I
Pnap_1380	PWY-6363	D-<i>myo</i>-inositol (1,4,5)-trisphosphate degradation
Pnap_1382	PWY-6936	seleno-amino acid biosynthesis
Pnap_1382	PWY-7274	D-cycloserine biosynthesis
Pnap_1402	PWY-5194	siroheme biosynthesis
Pnap_1402	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
Pnap_1407	PWY-6683	sulfate reduction III (assimilatory)
Pnap_1422	PWY-1042	glycolysis IV (plant cytosol)
Pnap_1422	PWY-5484	glycolysis II (from fructose 6-phosphate)
Pnap_1422	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Pnap_1422	PWY-7003	glycerol degradation to butanol
Pnap_1436	PWY-3781	aerobic respiration I (cytochrome c)
Pnap_1436	PWY-4302	aerobic respiration III (alternative oxidase pathway)
Pnap_1436	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
Pnap_1436	PWY-6692	Fe(II) oxidation
Pnap_1463	PWY-6829	tRNA methylation (yeast)
Pnap_1463	PWY-7285	methylwyosine biosynthesis
Pnap_1463	PWY-7286	7-(3-amino-3-carboxypropyl)-wyosine biosynthesis
Pnap_1468	PWY-7158	L-phenylalanine degradation V
Pnap_1476	PWY-702	L-methionine biosynthesis II
Pnap_1501	PWY-6891	thiazole biosynthesis II (Bacillus)
Pnap_1501	PWY-6892	thiazole biosynthesis I (E. coli)
Pnap_1501	PWY-7560	methylerythritol phosphate pathway II
Pnap_1505	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
Pnap_1538	PWY-723	alkylnitronates degradation
Pnap_1551	PWY-6654	phosphopantothenate biosynthesis III
Pnap_1555	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Pnap_1559	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Pnap_1559	PWY-6416	quinate degradation II
Pnap_1559	PWY-6707	gallate biosynthesis
Pnap_1561	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Pnap_1562	PWY-5913	TCA cycle VI (obligate autotrophs)
Pnap_1562	PWY-6318	L-phenylalanine degradation IV (mammalian, via side chain)
Pnap_1562	PWY-6638	sulfolactate degradation III
Pnap_1562	PWY-6642	(<i>R</i>)-cysteate degradation
Pnap_1562	PWY-6643	coenzyme M biosynthesis II
Pnap_1562	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
Pnap_1562	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
Pnap_1562	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
Pnap_1569	PWY-6823	molybdenum cofactor biosynthesis
Pnap_1569	PWY-6891	thiazole biosynthesis II (Bacillus)
Pnap_1569	PWY-6892	thiazole biosynthesis I (E. coli)
Pnap_1569	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
Pnap_1574	PWY-6823	molybdenum cofactor biosynthesis
Pnap_1582	PWY-6823	molybdenum cofactor biosynthesis
Pnap_1582	PWY-6891	thiazole biosynthesis II (Bacillus)
Pnap_1582	PWY-6892	thiazole biosynthesis I (E. coli)
Pnap_1582	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
Pnap_1596	PWY-6497	D-galactarate degradation II
Pnap_1596	PWY-6499	D-glucarate degradation II
Pnap_1597	PWY-6497	D-galactarate degradation II
Pnap_1607	PWY-4041	&gamma;-glutamyl cycle
Pnap_1607	PWY-5826	hypoglycin biosynthesis
Pnap_1620	PWY-5381	pyridine nucleotide cycling (plants)
Pnap_1628	PWY-5269	cardiolipin biosynthesis II
Pnap_1628	PWY-5668	cardiolipin biosynthesis I
Pnap_1649	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Pnap_1666	PWY-5274	sulfide oxidation II (sulfide dehydrogenase)
Pnap_1678	PWY-5386	methylglyoxal degradation I
Pnap_1687	PWY-6823	molybdenum cofactor biosynthesis
Pnap_1688	PWY-5964	guanylyl molybdenum cofactor biosynthesis
Pnap_1689	PWY-6823	molybdenum cofactor biosynthesis
Pnap_1698	PWY-5101	L-isoleucine biosynthesis II
Pnap_1698	PWY-5103	L-isoleucine biosynthesis III
Pnap_1698	PWY-5104	L-isoleucine biosynthesis IV
Pnap_1698	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Pnap_1709	PWY-5381	pyridine nucleotide cycling (plants)
Pnap_1709	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
Pnap_1712	PWY-7039	phosphatidate metabolism, as a signaling molecule
Pnap_1717	PWY-5101	L-isoleucine biosynthesis II
Pnap_1717	PWY-5103	L-isoleucine biosynthesis III
Pnap_1717	PWY-5104	L-isoleucine biosynthesis IV
Pnap_1717	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
Pnap_1717	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
Pnap_1717	PWY-6389	(<i>S</i>)-acetoin biosynthesis
Pnap_1717	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Pnap_1718	PWY-5101	L-isoleucine biosynthesis II
Pnap_1718	PWY-5103	L-isoleucine biosynthesis III
Pnap_1718	PWY-5104	L-isoleucine biosynthesis IV
Pnap_1718	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
Pnap_1718	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
Pnap_1718	PWY-6389	(<i>S</i>)-acetoin biosynthesis
Pnap_1718	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Pnap_1719	PWY-5101	L-isoleucine biosynthesis II
Pnap_1719	PWY-5103	L-isoleucine biosynthesis III
Pnap_1719	PWY-5104	L-isoleucine biosynthesis IV
Pnap_1719	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Pnap_1720	PWY-5669	phosphatidylethanolamine biosynthesis I
Pnap_1721	PWY-6871	3-methylbutanol biosynthesis
Pnap_1726	PWY-7183	pyrimidine nucleobases salvage I
Pnap_1729	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Pnap_1729	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
Pnap_1729	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
Pnap_1730	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
Pnap_1730	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
Pnap_1757	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
Pnap_1764	PWY-7560	methylerythritol phosphate pathway II
Pnap_1769	PWY-5971	palmitate biosynthesis II (bacteria and plants)
Pnap_1769	PWY-5973	<i>cis</i>-vaccenate biosynthesis
Pnap_1769	PWY-5989	stearate biosynthesis II (bacteria and plants)
Pnap_1769	PWY-5994	palmitate biosynthesis I (animals and fungi)
Pnap_1769	PWY-6113	superpathway of mycolate biosynthesis
Pnap_1769	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
Pnap_1769	PWY-6519	8-amino-7-oxononanoate biosynthesis I
Pnap_1769	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Pnap_1769	PWYG-321	mycolate biosynthesis
Pnap_1774	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Pnap_1774	PWY-5686	UMP biosynthesis
Pnap_1774	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Pnap_1775	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Pnap_1775	PWY-5686	UMP biosynthesis
Pnap_1775	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Pnap_1778	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
Pnap_1778	PWY-2201	folate transformations I
Pnap_1778	PWY-3841	folate transformations II
Pnap_1778	PWY-5030	L-histidine degradation III
Pnap_1778	PWY-5497	purine nucleobases degradation II (anaerobic)
Pnap_1778	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
Pnap_1781	PWY-6891	thiazole biosynthesis II (Bacillus)
Pnap_1781	PWY-6892	thiazole biosynthesis I (E. coli)
Pnap_1781	PWY-7560	methylerythritol phosphate pathway II
Pnap_1784	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
Pnap_1784	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
Pnap_1804	PWY-3941	&beta;-alanine biosynthesis II
Pnap_1804	PWY-5104	L-isoleucine biosynthesis IV
Pnap_1804	PWY-5747	2-methylcitrate cycle II
Pnap_1821	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Pnap_1821	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
Pnap_1821	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
Pnap_1826	PWY-2723	trehalose degradation V
Pnap_1826	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
Pnap_1826	PWY-5661	GDP-glucose biosynthesis
Pnap_1826	PWY-5940	streptomycin biosynthesis
Pnap_1826	PWY-621	sucrose degradation III (sucrose invertase)
Pnap_1826	PWY-622	starch biosynthesis
Pnap_1826	PWY-6731	starch degradation III
Pnap_1826	PWY-6737	starch degradation V
Pnap_1826	PWY-6981	chitin biosynthesis
Pnap_1826	PWY-7238	sucrose biosynthesis II
Pnap_1826	PWY-7343	UDP-glucose biosynthesis
Pnap_1830	PWY-5506	methanol oxidation to formaldehyde IV
Pnap_1842	PWY-1361	benzoyl-CoA degradation I (aerobic)
Pnap_1842	PWY-5109	2-methylbutanoate biosynthesis
Pnap_1842	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
Pnap_1842	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
Pnap_1842	PWY-5177	glutaryl-CoA degradation
Pnap_1842	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Pnap_1842	PWY-6435	4-hydroxybenzoate biosynthesis V
Pnap_1842	PWY-6583	pyruvate fermentation to butanol I
Pnap_1842	PWY-6863	pyruvate fermentation to hexanol
Pnap_1842	PWY-6883	pyruvate fermentation to butanol II
Pnap_1842	PWY-6944	androstenedione degradation
Pnap_1842	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
Pnap_1842	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
Pnap_1842	PWY-7007	methyl ketone biosynthesis
Pnap_1842	PWY-7046	4-coumarate degradation (anaerobic)
Pnap_1842	PWY-7094	fatty acid salvage
Pnap_1842	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
Pnap_1842	PWY-735	jasmonic acid biosynthesis
Pnap_1842	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
Pnap_1856	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
Pnap_1857	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
Pnap_1858	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
Pnap_1858	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
Pnap_1868	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
Pnap_1868	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
Pnap_1868	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Pnap_1868	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
Pnap_1868	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
Pnap_1868	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
Pnap_1868	PWY-7205	CMP phosphorylation
Pnap_1868	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
Pnap_1868	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Pnap_1868	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
Pnap_1868	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Pnap_1868	PWY-7224	purine deoxyribonucleosides salvage
Pnap_1868	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
Pnap_1868	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
Pnap_1872	PWY-7560	methylerythritol phosphate pathway II
Pnap_1883	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Pnap_1901	PWY-6215	4-chlorobenzoate degradation
Pnap_1915	PWY-1361	benzoyl-CoA degradation I (aerobic)
Pnap_1915	PWY-5109	2-methylbutanoate biosynthesis
Pnap_1915	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
Pnap_1915	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
Pnap_1915	PWY-5177	glutaryl-CoA degradation
Pnap_1915	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Pnap_1915	PWY-6435	4-hydroxybenzoate biosynthesis V
Pnap_1915	PWY-6583	pyruvate fermentation to butanol I
Pnap_1915	PWY-6863	pyruvate fermentation to hexanol
Pnap_1915	PWY-6883	pyruvate fermentation to butanol II
Pnap_1915	PWY-6944	androstenedione degradation
Pnap_1915	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
Pnap_1915	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
Pnap_1915	PWY-7007	methyl ketone biosynthesis
Pnap_1915	PWY-7046	4-coumarate degradation (anaerobic)
Pnap_1915	PWY-7094	fatty acid salvage
Pnap_1915	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
Pnap_1915	PWY-735	jasmonic acid biosynthesis
Pnap_1915	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
Pnap_1920	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Pnap_1921	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
Pnap_1921	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
Pnap_1927	PWY-6854	ethylene biosynthesis III (microbes)
Pnap_1930	PWY-5913	TCA cycle VI (obligate autotrophs)
Pnap_1930	PWY-6549	L-glutamine biosynthesis III
Pnap_1930	PWY-6728	methylaspartate cycle
Pnap_1930	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Pnap_1930	PWY-7124	ethylene biosynthesis V (engineered)
Pnap_1930	PWY-7254	TCA cycle VII (acetate-producers)
Pnap_1930	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
Pnap_1948	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
Pnap_1948	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Pnap_1948	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
Pnap_1948	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
Pnap_1948	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
Pnap_1948	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
Pnap_1978	PWY-5532	adenosine nucleotides degradation IV
Pnap_1978	PWY-5723	Rubisco shunt
Pnap_1981	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Pnap_1981	PWY-5723	Rubisco shunt
Pnap_1982	PWY-5484	glycolysis II (from fructose 6-phosphate)
Pnap_1983	PWY-5723	Rubisco shunt
Pnap_1984	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Pnap_1984	PWY-5723	Rubisco shunt
Pnap_1984	PWY-6891	thiazole biosynthesis II (Bacillus)
Pnap_1984	PWY-6892	thiazole biosynthesis I (E. coli)
Pnap_1984	PWY-6901	superpathway of glucose and xylose degradation
Pnap_1984	PWY-7560	methylerythritol phosphate pathway II
Pnap_1985	PWY-181	photorespiration
Pnap_1986	PWY-1042	glycolysis IV (plant cytosol)
Pnap_1986	PWY-5484	glycolysis II (from fructose 6-phosphate)
Pnap_1986	PWY-6901	superpathway of glucose and xylose degradation
Pnap_1986	PWY-7003	glycerol degradation to butanol
Pnap_1987	PWY-1042	glycolysis IV (plant cytosol)
Pnap_1987	PWY-5484	glycolysis II (from fructose 6-phosphate)
Pnap_1987	PWY-6886	1-butanol autotrophic biosynthesis
Pnap_1987	PWY-6901	superpathway of glucose and xylose degradation
Pnap_1987	PWY-7003	glycerol degradation to butanol
Pnap_1988	PWY-1042	glycolysis IV (plant cytosol)
Pnap_1988	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Pnap_1988	PWY-5484	glycolysis II (from fructose 6-phosphate)
Pnap_1988	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Pnap_1988	PWY-7385	1,3-propanediol biosynthesis (engineered)
Pnap_1993	PWY-5506	methanol oxidation to formaldehyde IV
Pnap_2000	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
Pnap_2001	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
Pnap_2001	PWY-6596	adenosine nucleotides degradation I
Pnap_2001	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
Pnap_2018	PWY-5971	palmitate biosynthesis II (bacteria and plants)
Pnap_2018	PWY-5973	<i>cis</i>-vaccenate biosynthesis
Pnap_2018	PWY-5989	stearate biosynthesis II (bacteria and plants)
Pnap_2018	PWY-6113	superpathway of mycolate biosynthesis
Pnap_2018	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
Pnap_2018	PWY-6519	8-amino-7-oxononanoate biosynthesis I
Pnap_2018	PWY-7096	triclosan resistance
Pnap_2018	PWYG-321	mycolate biosynthesis
Pnap_2028	PWY-6216	3-chlorobenzoate degradation II (via protocatechuate)
Pnap_2028	PWY-6217	3,4-dichlorobenzoate degradation
Pnap_2039	PWY-5381	pyridine nucleotide cycling (plants)
Pnap_2042	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
Pnap_2042	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
Pnap_2078	PWY-5022	4-aminobutanoate degradation V
Pnap_2078	PWY-6728	methylaspartate cycle
Pnap_2078	PWY-7126	ethylene biosynthesis IV
Pnap_2081	PWY-5484	glycolysis II (from fructose 6-phosphate)
Pnap_2118	PWY-6185	4-methylcatechol degradation (<i>ortho</i> cleavage)
Pnap_2124	PWY-5791	1,4-dihydroxy-2-naphthoate biosynthesis II (plants)
Pnap_2124	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
Pnap_2135	PWY-1361	benzoyl-CoA degradation I (aerobic)
Pnap_2135	PWY-5109	2-methylbutanoate biosynthesis
Pnap_2135	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
Pnap_2135	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
Pnap_2135	PWY-5177	glutaryl-CoA degradation
Pnap_2135	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Pnap_2135	PWY-6435	4-hydroxybenzoate biosynthesis V
Pnap_2135	PWY-6583	pyruvate fermentation to butanol I
Pnap_2135	PWY-6863	pyruvate fermentation to hexanol
Pnap_2135	PWY-6883	pyruvate fermentation to butanol II
Pnap_2135	PWY-6944	androstenedione degradation
Pnap_2135	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
Pnap_2135	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
Pnap_2135	PWY-7007	methyl ketone biosynthesis
Pnap_2135	PWY-7046	4-coumarate degradation (anaerobic)
Pnap_2135	PWY-7094	fatty acid salvage
Pnap_2135	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
Pnap_2135	PWY-735	jasmonic acid biosynthesis
Pnap_2135	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
Pnap_2136	PWY-1361	benzoyl-CoA degradation I (aerobic)
Pnap_2136	PWY-2361	3-oxoadipate degradation
Pnap_2136	PWY-6185	4-methylcatechol degradation (<i>ortho</i> cleavage)
Pnap_2149	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
Pnap_2149	PWY-5523	5,6-dimethylbenzimidazole biosynthesis
Pnap_2150	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
Pnap_2150	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
Pnap_2150	PWY-6268	adenosylcobalamin salvage from cobalamin
Pnap_2150	PWY-6269	adenosylcobalamin salvage from cobinamide II
Pnap_2151	PWY-5194	siroheme biosynthesis
Pnap_2151	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
Pnap_2157	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
Pnap_2159	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
Pnap_2160	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
Pnap_2162	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
Pnap_2163	PWY-5194	siroheme biosynthesis
Pnap_2163	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
Pnap_2169	PWY-5988	wound-induced proteolysis I
Pnap_2169	PWY-6018	seed germination protein turnover
Pnap_2172	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
Pnap_2177	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Pnap_2196	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Pnap_2226	PWY-6823	molybdenum cofactor biosynthesis
Pnap_2228	PWY-6823	molybdenum cofactor biosynthesis
Pnap_2290	PWY-6823	molybdenum cofactor biosynthesis
Pnap_2290	PWY-6891	thiazole biosynthesis II (Bacillus)
Pnap_2290	PWY-6892	thiazole biosynthesis I (E. coli)
Pnap_2290	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
Pnap_2299	PWY-3162	L-tryptophan degradation V (side chain pathway)
Pnap_2299	PWY-5057	L-valine degradation II
Pnap_2299	PWY-5076	L-leucine degradation III
Pnap_2299	PWY-5078	L-isoleucine degradation II
Pnap_2299	PWY-5079	L-phenylalanine degradation III
Pnap_2299	PWY-5082	L-methionine degradation III
Pnap_2299	PWY-5480	pyruvate fermentation to ethanol I
Pnap_2299	PWY-5486	pyruvate fermentation to ethanol II
Pnap_2299	PWY-5751	phenylethanol biosynthesis
Pnap_2299	PWY-6028	acetoin degradation
Pnap_2299	PWY-6313	serotonin degradation
Pnap_2299	PWY-6333	acetaldehyde biosynthesis I
Pnap_2299	PWY-6342	noradrenaline and adrenaline degradation
Pnap_2299	PWY-6587	pyruvate fermentation to ethanol III
Pnap_2299	PWY-6802	salidroside biosynthesis
Pnap_2299	PWY-6871	3-methylbutanol biosynthesis
Pnap_2299	PWY-7013	L-1,2-propanediol degradation
Pnap_2299	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Pnap_2299	PWY-7118	chitin degradation to ethanol
Pnap_2299	PWY-7396	butanol and isobutanol biosynthesis (engineered)
Pnap_2299	PWY-7557	dehydrodiconiferyl alcohol degradation
Pnap_2307	PWY-5367	petroselinate biosynthesis
Pnap_2307	PWY-5971	palmitate biosynthesis II (bacteria and plants)
Pnap_2307	PWY-5973	<i>cis</i>-vaccenate biosynthesis
Pnap_2307	PWY-5989	stearate biosynthesis II (bacteria and plants)
Pnap_2307	PWY-5994	palmitate biosynthesis I (animals and fungi)
Pnap_2307	PWY-6113	superpathway of mycolate biosynthesis
Pnap_2307	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
Pnap_2307	PWY-6519	8-amino-7-oxononanoate biosynthesis I
Pnap_2307	PWY-6951	Pnap_2307
Pnap_2307	PWY-7053	docosahexaenoate biosynthesis I (lower eukaryotes)
Pnap_2307	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Pnap_2307	PWYG-321	mycolate biosynthesis
Pnap_2310	PWY-3081	L-lysine biosynthesis V
Pnap_2310	PWY-6871	3-methylbutanol biosynthesis
Pnap_2311	PWY-6936	seleno-amino acid biosynthesis
Pnap_2311	PWY-7274	D-cycloserine biosynthesis
Pnap_2329	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Pnap_2336	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Pnap_2365	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
Pnap_2365	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
Pnap_2365	PWY-6269	adenosylcobalamin salvage from cobinamide II
Pnap_2381	PWY-4381	fatty acid biosynthesis initiation I
Pnap_2381	PWY-5743	3-hydroxypropanoate cycle
Pnap_2381	PWY-5744	glyoxylate assimilation
Pnap_2381	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Pnap_2381	PWY-6679	jadomycin biosynthesis
Pnap_2381	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Pnap_2383	PWY-5743	3-hydroxypropanoate cycle
Pnap_2383	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Pnap_2383	PWY-6728	methylaspartate cycle
Pnap_2383	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Pnap_2399	PWY-5484	glycolysis II (from fructose 6-phosphate)
Pnap_2427	PWY-6683	sulfate reduction III (assimilatory)
Pnap_2430	PWY-5278	sulfite oxidation III
Pnap_2430	PWY-5340	sulfate activation for sulfonation
Pnap_2430	PWY-6683	sulfate reduction III (assimilatory)
Pnap_2430	PWY-6932	selenate reduction
Pnap_2431	PWY-5278	sulfite oxidation III
Pnap_2431	PWY-5340	sulfate activation for sulfonation
Pnap_2431	PWY-6683	sulfate reduction III (assimilatory)
Pnap_2431	PWY-6932	selenate reduction
Pnap_2433	PWY-101	photosynthesis light reactions
Pnap_2433	PWY-7230	ubiquinol-6 biosynthesis from 4-aminobenzoate (eukaryotic)
Pnap_2435	PWY-6910	hydroxymethylpyrimidine salvage
Pnap_2435	PWY-7356	thiamin salvage IV (yeast)
Pnap_2435	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
Pnap_2436	PWY-6938	NADH repair
Pnap_2465	PWY-5737	(5<i>R</i>)-carbapenem carboxylate biosynthesis
Pnap_2465	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
Pnap_2544	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
Pnap_2544	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
Pnap_2544	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
Pnap_2548	PWY-7560	methylerythritol phosphate pathway II
Pnap_2549	PWY-7560	methylerythritol phosphate pathway II
Pnap_2579	PWY-5381	pyridine nucleotide cycling (plants)
Pnap_2579	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
Pnap_2579	PWY-6596	adenosine nucleotides degradation I
Pnap_2579	PWY-6606	guanosine nucleotides degradation II
Pnap_2579	PWY-6607	guanosine nucleotides degradation I
Pnap_2579	PWY-6608	guanosine nucleotides degradation III
Pnap_2579	PWY-7185	UTP and CTP dephosphorylation I
Pnap_2586	PWY-4202	arsenate detoxification I (glutaredoxin)
Pnap_2586	PWY-4621	arsenate detoxification II (glutaredoxin)
Pnap_2609	PWY-6749	CMP-legionaminate biosynthesis I
Pnap_2610	PWY-6614	tetrahydrofolate biosynthesis
Pnap_2616	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Pnap_2616	PWY-5723	Rubisco shunt
Pnap_2617	PWY-5686	UMP biosynthesis
Pnap_2635	PWY-40	putrescine biosynthesis I
Pnap_2635	PWY-6305	putrescine biosynthesis IV
Pnap_2662	PWY-5506	methanol oxidation to formaldehyde IV
Pnap_2666	PWY-5101	L-isoleucine biosynthesis II
Pnap_2666	PWY-5103	L-isoleucine biosynthesis III
Pnap_2666	PWY-5104	L-isoleucine biosynthesis IV
Pnap_2666	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Pnap_2676	PWY-5080	very long chain fatty acid biosynthesis I
Pnap_2676	PWY-6433	hydroxylated fatty acid biosynthesis (plants)
Pnap_2676	PWY-7036	very long chain fatty acid biosynthesis II
Pnap_2680	PWY-6655	xanthan biosynthesis
Pnap_2680	PWY-6658	acetan biosynthesis
Pnap_2706	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Pnap_2745	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Pnap_2758	PWY-5344	L-homocysteine biosynthesis
Pnap_2758	PWY-7174	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation II
Pnap_2767	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Pnap_2767	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Pnap_2771	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Pnap_2771	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Pnap_2772	PWY-3841	folate transformations II
Pnap_2772	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Pnap_2772	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
Pnap_2772	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
Pnap_2772	PWY-7199	pyrimidine deoxyribonucleosides salvage
Pnap_2772	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
Pnap_2773	PWY-3841	folate transformations II
Pnap_2773	PWY-6614	tetrahydrofolate biosynthesis
Pnap_2774	PWY-723	alkylnitronates degradation
Pnap_2780	PWY-381	nitrate reduction II (assimilatory)
Pnap_2780	PWY-5675	nitrate reduction V (assimilatory)
Pnap_2780	PWY-6549	L-glutamine biosynthesis III
Pnap_2780	PWY-6963	ammonia assimilation cycle I
Pnap_2780	PWY-6964	ammonia assimilation cycle II
Pnap_2787	PWY-181	photorespiration
Pnap_2788	PWY-5855	ubiquinol-7 biosynthesis (prokaryotic)
Pnap_2788	PWY-5856	ubiquinol-9 biosynthesis (prokaryotic)
Pnap_2788	PWY-5857	ubiquinol-10 biosynthesis (prokaryotic)
Pnap_2788	PWY-5870	ubiquinol-8 biosynthesis (eukaryotic)
Pnap_2788	PWY-5871	ubiquinol-9 biosynthesis (eukaryotic)
Pnap_2788	PWY-5872	ubiquinol-10 biosynthesis (eukaryotic)
Pnap_2788	PWY-5873	ubiquinol-7 biosynthesis (eukaryotic)
Pnap_2788	PWY-6708	ubiquinol-8 biosynthesis (prokaryotic)
Pnap_2788	PWY-7230	ubiquinol-6 biosynthesis from 4-aminobenzoate (eukaryotic)
Pnap_2788	PWY-7233	ubiquinol-6 bypass biosynthesis (eukaryotic)
Pnap_2793	PWY-3461	L-tyrosine biosynthesis II
Pnap_2793	PWY-3462	L-phenylalanine biosynthesis II
Pnap_2793	PWY-6120	L-tyrosine biosynthesis III
Pnap_2793	PWY-6627	salinosporamide A biosynthesis
Pnap_2793	PWY-7432	L-phenylalanine biosynthesis III (cytosolic, plants)
Pnap_2795	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Pnap_2795	PWY-7205	CMP phosphorylation
Pnap_2803	PWY-5676	acetyl-CoA fermentation to butanoate II
Pnap_2803	PWY-5741	ethylmalonyl-CoA pathway
Pnap_2803	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
Pnap_2855	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Pnap_2864	PWY-381	nitrate reduction II (assimilatory)
Pnap_2864	PWY-5675	nitrate reduction V (assimilatory)
Pnap_2864	PWY-6549	L-glutamine biosynthesis III
Pnap_2864	PWY-6963	ammonia assimilation cycle I
Pnap_2864	PWY-6964	ammonia assimilation cycle II
Pnap_2877	PWY-5101	L-isoleucine biosynthesis II
Pnap_2877	PWY-5103	L-isoleucine biosynthesis III
Pnap_2877	PWY-5104	L-isoleucine biosynthesis IV
Pnap_2877	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Pnap_2880	PWY-6672	<i>cis</i>-genanyl-CoA degradation
Pnap_2880	PWY-7118	chitin degradation to ethanol
Pnap_2882	PWY-5392	reductive TCA cycle II
Pnap_2882	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
Pnap_2882	PWY-5690	TCA cycle II (plants and fungi)
Pnap_2882	PWY-5913	TCA cycle VI (obligate autotrophs)
Pnap_2882	PWY-6728	methylaspartate cycle
Pnap_2882	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Pnap_2882	PWY-7254	TCA cycle VII (acetate-producers)
Pnap_2882	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Pnap_2883	PWY-5392	reductive TCA cycle II
Pnap_2883	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
Pnap_2883	PWY-5690	TCA cycle II (plants and fungi)
Pnap_2883	PWY-5913	TCA cycle VI (obligate autotrophs)
Pnap_2883	PWY-6728	methylaspartate cycle
Pnap_2883	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Pnap_2883	PWY-7254	TCA cycle VII (acetate-producers)
Pnap_2883	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Pnap_2884	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Pnap_2884	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Pnap_2889	PWY-2941	L-lysine biosynthesis II
Pnap_2889	PWY-2942	L-lysine biosynthesis III
Pnap_2889	PWY-5097	L-lysine biosynthesis VI
Pnap_2889	PWY-6559	spermidine biosynthesis II
Pnap_2889	PWY-6562	norspermidine biosynthesis
Pnap_2889	PWY-7153	grixazone biosynthesis
Pnap_2891	PWY-4381	fatty acid biosynthesis initiation I
Pnap_2891	PWY-5743	3-hydroxypropanoate cycle
Pnap_2891	PWY-5744	glyoxylate assimilation
Pnap_2891	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Pnap_2891	PWY-6679	jadomycin biosynthesis
Pnap_2891	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Pnap_2907	PWY-1622	formaldehyde assimilation I (serine pathway)
Pnap_2907	PWY-181	photorespiration
Pnap_2907	PWY-2161	folate polyglutamylation
Pnap_2907	PWY-2201	folate transformations I
Pnap_2907	PWY-3661	glycine betaine degradation I
Pnap_2907	PWY-3661-1	glycine betaine degradation II (mammalian)
Pnap_2907	PWY-3841	folate transformations II
Pnap_2907	PWY-5497	purine nucleobases degradation II (anaerobic)
Pnap_2916	PWY-6167	flavin biosynthesis II (archaea)
Pnap_2916	PWY-6168	flavin biosynthesis III (fungi)
Pnap_2916	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Pnap_2917	PWY-6167	flavin biosynthesis II (archaea)
Pnap_2917	PWY-6168	flavin biosynthesis III (fungi)
Pnap_2917	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
Pnap_2918	PWY-6167	flavin biosynthesis II (archaea)
Pnap_2918	PWY-6168	flavin biosynthesis III (fungi)
Pnap_2940	PWY-1361	benzoyl-CoA degradation I (aerobic)
Pnap_2940	PWY-5109	2-methylbutanoate biosynthesis
Pnap_2940	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
Pnap_2940	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
Pnap_2940	PWY-5177	glutaryl-CoA degradation
Pnap_2940	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Pnap_2940	PWY-6435	4-hydroxybenzoate biosynthesis V
Pnap_2940	PWY-6583	pyruvate fermentation to butanol I
Pnap_2940	PWY-6863	pyruvate fermentation to hexanol
Pnap_2940	PWY-6883	pyruvate fermentation to butanol II
Pnap_2940	PWY-6944	androstenedione degradation
Pnap_2940	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
Pnap_2940	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
Pnap_2940	PWY-7007	methyl ketone biosynthesis
Pnap_2940	PWY-7046	4-coumarate degradation (anaerobic)
Pnap_2940	PWY-7094	fatty acid salvage
Pnap_2940	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
Pnap_2940	PWY-735	jasmonic acid biosynthesis
Pnap_2940	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
Pnap_2942	PWY-101	photosynthesis light reactions
Pnap_2942	PWY-1361	benzoyl-CoA degradation I (aerobic)
Pnap_2942	PWY-7230	ubiquinol-6 biosynthesis from 4-aminobenzoate (eukaryotic)
Pnap_2943	PWY-1361	benzoyl-CoA degradation I (aerobic)
Pnap_2944	PWY-1361	benzoyl-CoA degradation I (aerobic)
Pnap_2945	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Pnap_2984	PWY-5386	methylglyoxal degradation I
Pnap_2985	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
Pnap_2985	PWY-6507	4-deoxy-L-<i>threo</i>-hex-4-enopyranuronate degradation
Pnap_2985	PWY-7242	D-fructuronate degradation
Pnap_2985	PWY-7310	D-glucosaminate degradation
Pnap_2986	PWY-5101	L-isoleucine biosynthesis II
Pnap_2986	PWY-5103	L-isoleucine biosynthesis III
Pnap_2986	PWY-5104	L-isoleucine biosynthesis IV
Pnap_2986	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Pnap_2989	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
Pnap_2989	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
Pnap_2990	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
Pnap_2990	PWY-6148	tetrahydromethanopterin biosynthesis
Pnap_2990	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
Pnap_2990	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
Pnap_2994	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Pnap_2994	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
Pnap_2994	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
Pnap_3012	PWY-4981	L-proline biosynthesis II (from arginine)
Pnap_3012	PWY-4984	urea cycle
Pnap_3012	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Pnap_3018	PWY-5651	L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
Pnap_3018	PWY-6309	L-tryptophan degradation XI (mammalian, via kynurenine)
Pnap_3019	PWY-5651	L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
Pnap_3019	PWY-6309	L-tryptophan degradation XI (mammalian, via kynurenine)
Pnap_3027	PWY-5747	2-methylcitrate cycle II
Pnap_3030	PWY-1622	formaldehyde assimilation I (serine pathway)
Pnap_3030	PWY-5392	reductive TCA cycle II
Pnap_3030	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
Pnap_3030	PWY-5690	TCA cycle II (plants and fungi)
Pnap_3030	PWY-5913	TCA cycle VI (obligate autotrophs)
Pnap_3030	PWY-6728	methylaspartate cycle
Pnap_3030	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Pnap_3030	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
Pnap_3030	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
Pnap_3034	PWY-3781	aerobic respiration I (cytochrome c)
Pnap_3034	PWY-4302	aerobic respiration III (alternative oxidase pathway)
Pnap_3034	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
Pnap_3034	PWY-5690	TCA cycle II (plants and fungi)
Pnap_3034	PWY-6728	methylaspartate cycle
Pnap_3034	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Pnap_3034	PWY-7254	TCA cycle VII (acetate-producers)
Pnap_3034	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Pnap_3035	PWY-3781	aerobic respiration I (cytochrome c)
Pnap_3035	PWY-4302	aerobic respiration III (alternative oxidase pathway)
Pnap_3035	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
Pnap_3035	PWY-5690	TCA cycle II (plants and fungi)
Pnap_3035	PWY-6728	methylaspartate cycle
Pnap_3035	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Pnap_3035	PWY-7254	TCA cycle VII (acetate-producers)
Pnap_3035	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Pnap_3041	PWY-7396	butanol and isobutanol biosynthesis (engineered)
Pnap_3042	PWY-2941	L-lysine biosynthesis II
Pnap_3042	PWY-2942	L-lysine biosynthesis III
Pnap_3042	PWY-5097	L-lysine biosynthesis VI
Pnap_3042	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Pnap_3042	PWY-6559	spermidine biosynthesis II
Pnap_3042	PWY-6562	norspermidine biosynthesis
Pnap_3042	PWY-7153	grixazone biosynthesis
Pnap_3042	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Pnap_3048	PWY-4381	fatty acid biosynthesis initiation I
Pnap_3048	PWY-5743	3-hydroxypropanoate cycle
Pnap_3048	PWY-5744	glyoxylate assimilation
Pnap_3048	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Pnap_3048	PWY-6679	jadomycin biosynthesis
Pnap_3048	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Pnap_3056	PWY-6902	chitin degradation II
Pnap_3057	PWY-6012	acyl carrier protein metabolism I
Pnap_3057	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
Pnap_3072	PWY-5367	petroselinate biosynthesis
Pnap_3072	PWY-5971	palmitate biosynthesis II (bacteria and plants)
Pnap_3072	PWY-5973	<i>cis</i>-vaccenate biosynthesis
Pnap_3072	PWY-5989	stearate biosynthesis II (bacteria and plants)
Pnap_3072	PWY-5994	palmitate biosynthesis I (animals and fungi)
Pnap_3072	PWY-6113	superpathway of mycolate biosynthesis
Pnap_3072	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
Pnap_3072	PWY-6519	8-amino-7-oxononanoate biosynthesis I
Pnap_3072	PWY-6951	Pnap_3072
Pnap_3072	PWY-7053	docosahexaenoate biosynthesis I (lower eukaryotes)
Pnap_3072	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Pnap_3072	PWYG-321	mycolate biosynthesis
Pnap_3073	PWY-4381	fatty acid biosynthesis initiation I
Pnap_3073	PWY-6799	fatty acid biosynthesis (plant mitochondria)
Pnap_3073	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Pnap_3076	PWY-4381	fatty acid biosynthesis initiation I
Pnap_3089	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Pnap_3089	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
Pnap_3090	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Pnap_3090	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
Pnap_3091	PWY-1622	formaldehyde assimilation I (serine pathway)
Pnap_3091	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
Pnap_3091	PWY-5913	TCA cycle VI (obligate autotrophs)
Pnap_3091	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Pnap_3091	PWY-6146	<i>Methanobacterium thermoautotrophicum</i> biosynthetic metabolism
Pnap_3091	PWY-6549	L-glutamine biosynthesis III
Pnap_3091	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
Pnap_3091	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
Pnap_3091	PWY-7124	ethylene biosynthesis V (engineered)
Pnap_3098	PWY-4983	L-citrulline-nitric oxide cycle
Pnap_3098	PWY-4984	urea cycle
Pnap_3098	PWY-5	canavanine biosynthesis
Pnap_3098	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Pnap_3098	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Pnap_3131	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
Pnap_3131	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
Pnap_3131	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
Pnap_3164	PWY-6700	queuosine biosynthesis
Pnap_3172	PWY-6936	seleno-amino acid biosynthesis
Pnap_3175	PWY-3801	sucrose degradation II (sucrose synthase)
Pnap_3175	PWY-6527	stachyose degradation
Pnap_3175	PWY-6981	chitin biosynthesis
Pnap_3175	PWY-7238	sucrose biosynthesis II
Pnap_3175	PWY-7343	UDP-glucose biosynthesis
Pnap_3176	PWY-6655	xanthan biosynthesis
Pnap_3176	PWY-6658	acetan biosynthesis
Pnap_3190	PWY-5738	GDP-6-deoxy-D-talose biosynthesis
Pnap_3190	PWY-5739	GDP-D-perosamine biosynthesis
Pnap_3190	PWY-5740	GDP-L-colitose biosynthesis
Pnap_3190	PWY-66	GDP-L-fucose biosynthesis I (from GDP-D-mannose)
Pnap_3191	PWY-66	GDP-L-fucose biosynthesis I (from GDP-D-mannose)
Pnap_3192	PWY-5659	GDP-mannose biosynthesis
Pnap_3192	PWY-6073	alginate biosynthesis I (algal)
Pnap_3192	PWY-6082	alginate biosynthesis II (bacterial)
Pnap_3192	PWY-882	L-ascorbate biosynthesis I (L-galactose pathway)
Pnap_3222	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Pnap_3222	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
Pnap_3228	PWY-5523	5,6-dimethylbenzimidazole biosynthesis
Pnap_3228	PWY-6167	flavin biosynthesis II (archaea)
Pnap_3228	PWY-6168	flavin biosynthesis III (fungi)
Pnap_3273	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Pnap_3273	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Pnap_3335	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
Pnap_3337	PWY-7560	methylerythritol phosphate pathway II
Pnap_3344	PWY-5686	UMP biosynthesis
Pnap_3345	PWY-5686	UMP biosynthesis
Pnap_3357	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Pnap_3358	PWY-6123	inosine-5'-phosphate biosynthesis I
Pnap_3358	PWY-6124	inosine-5'-phosphate biosynthesis II
Pnap_3358	PWY-7234	inosine-5'-phosphate biosynthesis III
Pnap_3385	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
Pnap_3385	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Pnap_3385	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
Pnap_3385	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
Pnap_3385	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Pnap_3385	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Pnap_3385	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
Pnap_3385	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
Pnap_3386	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
Pnap_3386	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Pnap_3386	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
Pnap_3386	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
Pnap_3386	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Pnap_3386	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Pnap_3386	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
Pnap_3386	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
Pnap_3398	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
Pnap_3398	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
Pnap_3398	PWY-6164	3-dehydroquinate biosynthesis I
Pnap_3407	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Pnap_3415	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Pnap_3415	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Pnap_3416	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Pnap_3416	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Pnap_3417	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
Pnap_3417	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
Pnap_3417	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
Pnap_3417	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
Pnap_3419	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Pnap_3419	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Pnap_3420	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
Pnap_3420	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
Pnap_3420	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
Pnap_3421	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Pnap_3421	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Pnap_3435	PWY-2941	L-lysine biosynthesis II
Pnap_3435	PWY-5097	L-lysine biosynthesis VI
Pnap_3445	PWY-6936	seleno-amino acid biosynthesis
Pnap_3451	PWY-5686	UMP biosynthesis
Pnap_3476	PWY-1361	benzoyl-CoA degradation I (aerobic)
Pnap_3476	PWY-5109	2-methylbutanoate biosynthesis
Pnap_3476	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
Pnap_3476	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
Pnap_3476	PWY-5177	glutaryl-CoA degradation
Pnap_3476	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Pnap_3476	PWY-6435	4-hydroxybenzoate biosynthesis V
Pnap_3476	PWY-6583	pyruvate fermentation to butanol I
Pnap_3476	PWY-6863	pyruvate fermentation to hexanol
Pnap_3476	PWY-6883	pyruvate fermentation to butanol II
Pnap_3476	PWY-6944	androstenedione degradation
Pnap_3476	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
Pnap_3476	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
Pnap_3476	PWY-7007	methyl ketone biosynthesis
Pnap_3476	PWY-7046	4-coumarate degradation (anaerobic)
Pnap_3476	PWY-7094	fatty acid salvage
Pnap_3476	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
Pnap_3476	PWY-735	jasmonic acid biosynthesis
Pnap_3476	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
Pnap_3479	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Pnap_3479	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Pnap_3489	PWY-3221	dTDP-L-rhamnose biosynthesis II
Pnap_3489	PWY-6808	dTDP-D-forosamine biosynthesis
Pnap_3489	PWY-6942	dTDP-D-desosamine biosynthesis
Pnap_3489	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
Pnap_3489	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
Pnap_3489	PWY-6974	dTDP-L-olivose biosynthesis
Pnap_3489	PWY-6976	dTDP-L-mycarose biosynthesis
Pnap_3489	PWY-7104	dTDP-L-megosamine biosynthesis
Pnap_3489	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
Pnap_3489	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
Pnap_3489	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
Pnap_3489	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
Pnap_3489	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
Pnap_3489	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
Pnap_3489	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
Pnap_3489	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
Pnap_3491	PWY-3221	dTDP-L-rhamnose biosynthesis II
Pnap_3491	PWY-6808	dTDP-D-forosamine biosynthesis
Pnap_3491	PWY-6942	dTDP-D-desosamine biosynthesis
Pnap_3491	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
Pnap_3491	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
Pnap_3491	PWY-6974	dTDP-L-olivose biosynthesis
Pnap_3491	PWY-6976	dTDP-L-mycarose biosynthesis
Pnap_3491	PWY-7104	dTDP-L-megosamine biosynthesis
Pnap_3491	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
Pnap_3491	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
Pnap_3491	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
Pnap_3491	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
Pnap_3491	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
Pnap_3491	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
Pnap_3491	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
Pnap_3491	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
Pnap_3511	PWY-3961	phosphopantothenate biosynthesis II
Pnap_3524	PWY-5743	3-hydroxypropanoate cycle
Pnap_3524	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Pnap_3524	PWY-6728	methylaspartate cycle
Pnap_3524	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Pnap_3545	PWY-6617	adenosine nucleotides degradation III
Pnap_3557	PWY-1042	glycolysis IV (plant cytosol)
Pnap_3557	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Pnap_3557	PWY-5484	glycolysis II (from fructose 6-phosphate)
Pnap_3557	PWY-6531	mannitol cycle
Pnap_3557	PWY-7385	1,3-propanediol biosynthesis (engineered)
Pnap_3562	PWY-6454	vancomycin resistance I
Pnap_3562	PWY-6455	vancomycin resistance II
Pnap_3567	PWY-5971	palmitate biosynthesis II (bacteria and plants)
Pnap_3567	PWY-5973	<i>cis</i>-vaccenate biosynthesis
Pnap_3567	PWY-5989	stearate biosynthesis II (bacteria and plants)
Pnap_3567	PWY-6113	superpathway of mycolate biosynthesis
Pnap_3567	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
Pnap_3567	PWY-6519	8-amino-7-oxononanoate biosynthesis I
Pnap_3567	PWY-7096	triclosan resistance
Pnap_3567	PWYG-321	mycolate biosynthesis
Pnap_3568	PWY-1281	sulfoacetaldehyde degradation I
Pnap_3568	PWY-5482	pyruvate fermentation to acetate II
Pnap_3568	PWY-5485	pyruvate fermentation to acetate IV
Pnap_3568	PWY-5497	purine nucleobases degradation II (anaerobic)
Pnap_3568	PWY-6637	sulfolactate degradation II
Pnap_3569	PWY-5482	pyruvate fermentation to acetate II
Pnap_3569	PWY-5485	pyruvate fermentation to acetate IV
Pnap_3569	PWY-5497	purine nucleobases degradation II (anaerobic)
Pnap_3652	PWY-5958	acridone alkaloid biosynthesis
Pnap_3652	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
Pnap_3652	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
Pnap_3653	PWY-3461	L-tyrosine biosynthesis II
Pnap_3653	PWY-3462	L-phenylalanine biosynthesis II
Pnap_3653	PWY-6120	L-tyrosine biosynthesis III
Pnap_3653	PWY-6627	salinosporamide A biosynthesis
Pnap_3654	PWY-5958	acridone alkaloid biosynthesis
Pnap_3654	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
Pnap_3654	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
Pnap_3656	PWY-181	photorespiration
Pnap_3657	PWY-6654	phosphopantothenate biosynthesis III
Pnap_3660	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Pnap_3660	PWY-5723	Rubisco shunt
Pnap_3664	PWY-6840	homoglutathione biosynthesis
Pnap_3664	PWY-7255	ergothioneine biosynthesis I (bacteria)
Pnap_3665	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
Pnap_3665	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
Pnap_3665	PWY-6896	thiamin salvage I
Pnap_3665	PWY-6897	thiamin salvage II
Pnap_3666	PWY-5269	cardiolipin biosynthesis II
Pnap_3666	PWY-5668	cardiolipin biosynthesis I
Pnap_3680	PWY-5913	TCA cycle VI (obligate autotrophs)
Pnap_3680	PWY-6549	L-glutamine biosynthesis III
Pnap_3680	PWY-6728	methylaspartate cycle
Pnap_3680	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Pnap_3680	PWY-7124	ethylene biosynthesis V (engineered)
Pnap_3680	PWY-7254	TCA cycle VII (acetate-producers)
Pnap_3680	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
Pnap_3683	PWY-6728	methylaspartate cycle
Pnap_3683	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Pnap_3683	PWY-7118	chitin degradation to ethanol
Pnap_3683	PWY-7294	xylose degradation IV
Pnap_3683	PWY-7295	L-arabinose degradation IV
Pnap_3684	PWY-7425	2-chloroacrylate degradation I
Pnap_3694	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
Pnap_3695	PWY-2723	trehalose degradation V
Pnap_3695	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
Pnap_3695	PWY-5661	GDP-glucose biosynthesis
Pnap_3695	PWY-7238	sucrose biosynthesis II
Pnap_3695	PWY-7385	1,3-propanediol biosynthesis (engineered)
Pnap_3719	PWY-5381	pyridine nucleotide cycling (plants)
Pnap_3731	PWY-4621	arsenate detoxification II (glutaredoxin)
Pnap_3755	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
Pnap_3755	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Pnap_3755	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
Pnap_3755	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
Pnap_3755	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Pnap_3755	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Pnap_3755	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
Pnap_3755	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
Pnap_3756	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
Pnap_3756	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Pnap_3756	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
Pnap_3756	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
Pnap_3772	PWY-31	canavanine degradation
Pnap_3772	PWY-4984	urea cycle
Pnap_3772	PWY-6305	putrescine biosynthesis IV
Pnap_3772	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
Pnap_3781	PWY-3781	aerobic respiration I (cytochrome c)
Pnap_3781	PWY-4521	arsenite oxidation I (respiratory)
Pnap_3781	PWY-6692	Fe(II) oxidation
Pnap_3781	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Pnap_3782	PWY-3781	aerobic respiration I (cytochrome c)
Pnap_3782	PWY-4521	arsenite oxidation I (respiratory)
Pnap_3782	PWY-6692	Fe(II) oxidation
Pnap_3782	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Pnap_3789	PWY-2941	L-lysine biosynthesis II
Pnap_3789	PWY-2942	L-lysine biosynthesis III
Pnap_3789	PWY-5097	L-lysine biosynthesis VI
Pnap_3796	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
Pnap_3796	PWY-6153	autoinducer AI-2 biosynthesis I
Pnap_3796	PWY-6154	autoinducer AI-2 biosynthesis II (<i>Vibrio</i>)
Pnap_3801	PWY-5642	2,4-dinitrotoluene degradation
Pnap_3801	PWY-6373	acrylate degradation
Pnap_3811	PWY-6123	inosine-5'-phosphate biosynthesis I
Pnap_3811	PWY-6124	inosine-5'-phosphate biosynthesis II
Pnap_3811	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Pnap_3811	PWY-7234	inosine-5'-phosphate biosynthesis III
Pnap_3838	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Pnap_3838	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Pnap_3840	PWY-7533	gliotoxin biosynthesis
Pnap_3843	PWY-5686	UMP biosynthesis
Pnap_3847	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
Pnap_3847	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
Pnap_3863	PWY-6123	inosine-5'-phosphate biosynthesis I
Pnap_3863	PWY-7234	inosine-5'-phosphate biosynthesis III
Pnap_3868	PWY-6123	inosine-5'-phosphate biosynthesis I
Pnap_3868	PWY-6124	inosine-5'-phosphate biosynthesis II
Pnap_3868	PWY-7234	inosine-5'-phosphate biosynthesis III
Pnap_3869	PWY-1042	glycolysis IV (plant cytosol)
Pnap_3869	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Pnap_3869	PWY-5484	glycolysis II (from fructose 6-phosphate)
Pnap_3869	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Pnap_3869	PWY-7385	1,3-propanediol biosynthesis (engineered)
Pnap_3873	PWY-1042	glycolysis IV (plant cytosol)
Pnap_3873	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
Pnap_3873	PWY-5484	glycolysis II (from fructose 6-phosphate)
Pnap_3873	PWY-5723	Rubisco shunt
Pnap_3873	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Pnap_3873	PWY-6886	1-butanol autotrophic biosynthesis
Pnap_3873	PWY-6901	superpathway of glucose and xylose degradation
Pnap_3873	PWY-7003	glycerol degradation to butanol
Pnap_3873	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
Pnap_3873	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
Pnap_3874	PWY-1042	glycolysis IV (plant cytosol)
Pnap_3874	PWY-5484	glycolysis II (from fructose 6-phosphate)
Pnap_3874	PWY-6886	1-butanol autotrophic biosynthesis
Pnap_3874	PWY-6901	superpathway of glucose and xylose degradation
Pnap_3874	PWY-7003	glycerol degradation to butanol
Pnap_3914	PWY-6123	inosine-5'-phosphate biosynthesis I
Pnap_3914	PWY-6124	inosine-5'-phosphate biosynthesis II
Pnap_3914	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Pnap_3914	PWY-7234	inosine-5'-phosphate biosynthesis III
Pnap_3952	PWY-5392	reductive TCA cycle II
Pnap_3952	PWY-5537	pyruvate fermentation to acetate V
Pnap_3952	PWY-5538	pyruvate fermentation to acetate VI
Pnap_3952	PWY-5690	TCA cycle II (plants and fungi)
Pnap_3952	PWY-5913	TCA cycle VI (obligate autotrophs)
Pnap_3952	PWY-6728	methylaspartate cycle
Pnap_3952	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Pnap_3952	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Pnap_3953	PWY-5392	reductive TCA cycle II
Pnap_3953	PWY-5537	pyruvate fermentation to acetate V
Pnap_3953	PWY-5538	pyruvate fermentation to acetate VI
Pnap_3953	PWY-5690	TCA cycle II (plants and fungi)
Pnap_3953	PWY-5913	TCA cycle VI (obligate autotrophs)
Pnap_3953	PWY-6728	methylaspartate cycle
Pnap_3953	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Pnap_3953	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Pnap_3954	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Pnap_3954	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Pnap_3965	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
Pnap_3965	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
Pnap_3996	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Pnap_3996	PWY-6416	quinate degradation II
Pnap_3996	PWY-6707	gallate biosynthesis
Pnap_3999	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Pnap_3999	PWY-6416	quinate degradation II
Pnap_3999	PWY-6707	gallate biosynthesis
Pnap_4000	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
Pnap_4000	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
Pnap_4016	PWY-6654	phosphopantothenate biosynthesis III
Pnap_4021	PWY-3982	uracil degradation I (reductive)
Pnap_4021	PWY-6430	thymine degradation
Pnap_4027	PWY-2582	brassinosteroid biosynthesis II
Pnap_4027	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
Pnap_4027	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
Pnap_4027	PWY-6948	sitosterol degradation to androstenedione
Pnap_4027	PWY-699	brassinosteroid biosynthesis I
Pnap_4027	PWY-7299	progesterone biosynthesis
Pnap_4030	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
Pnap_4031	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
Pnap_4032	PWY-6519	8-amino-7-oxononanoate biosynthesis I
Pnap_4032	PWY-6578	8-amino-7-oxononanoate biosynthesis III
Pnap_4032	PWY-7147	8-amino-7-oxononanoate biosynthesis II
Pnap_4055	PWY-1042	glycolysis IV (plant cytosol)
Pnap_4055	PWY-5484	glycolysis II (from fructose 6-phosphate)
Pnap_4055	PWY-6901	superpathway of glucose and xylose degradation
Pnap_4055	PWY-7003	glycerol degradation to butanol
Pnap_4056	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Pnap_4056	PWY-5723	Rubisco shunt
Pnap_4056	PWY-6891	thiazole biosynthesis II (Bacillus)
Pnap_4056	PWY-6892	thiazole biosynthesis I (E. coli)
Pnap_4056	PWY-6901	superpathway of glucose and xylose degradation
Pnap_4056	PWY-7560	methylerythritol phosphate pathway II
Pnap_4070	PWY-5737	(5<i>R</i>)-carbapenem carboxylate biosynthesis
Pnap_4070	PWY-6853	ethylene biosynthesis II (microbes)
Pnap_4070	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
Pnap_4071	PWY-1281	sulfoacetaldehyde degradation I
Pnap_4071	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
Pnap_4071	PWY-5482	pyruvate fermentation to acetate II
Pnap_4071	PWY-5485	pyruvate fermentation to acetate IV
Pnap_4071	PWY-5497	purine nucleobases degradation II (anaerobic)
Pnap_4071	PWY-6637	sulfolactate degradation II
Pnap_4071	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
Pnap_4088	PWY-5669	phosphatidylethanolamine biosynthesis I
Pnap_4102	PWY-5344	L-homocysteine biosynthesis
Pnap_4107	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
Pnap_4107	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
Pnap_4121	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
Pnap_4121	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
Pnap_4121	PWY-6164	3-dehydroquinate biosynthesis I
