Pnuc_0024 PWY-7219 adenosine ribonucleotides de novo biosynthesis Pnuc_0026 PWY-7219 adenosine ribonucleotides de novo biosynthesis Pnuc_0028 PWY-5531 chlorophyllide a biosynthesis II (anaerobic) Pnuc_0028 PWY-7159 chlorophyllide a biosynthesis III (aerobic, light independent) Pnuc_0035 PWY-6478 GDP-D-glycero-α-D-manno-heptose biosynthesis Pnuc_0083 PWY-5188 tetrapyrrole biosynthesis I (from glutamate) Pnuc_0083 PWY-5189 tetrapyrrole biosynthesis II (from glycine) Pnuc_0086 PWY-2941 L-lysine biosynthesis II Pnuc_0086 PWY-2942 L-lysine biosynthesis III Pnuc_0086 PWY-5097 L-lysine biosynthesis VI Pnuc_0088 PWY-6164 3-dehydroquinate biosynthesis I Pnuc_0089 PWY-6163 chorismate biosynthesis from 3-dehydroquinate Pnuc_0105 PWY-6386 UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing) Pnuc_0105 PWY-6387 UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing) Pnuc_0125 PWY-3781 aerobic respiration I (cytochrome c) Pnuc_0125 PWY-6692 Fe(II) oxidation Pnuc_0125 PWY-7082 ammonia oxidation IV (autotrophic ammonia oxidizers) Pnuc_0125 PWY-7279 aerobic respiration II (cytochrome c) (yeast) Pnuc_0137 PWY-5188 tetrapyrrole biosynthesis I (from glutamate) Pnuc_0147 PWY-5958 acridone alkaloid biosynthesis Pnuc_0147 PWY-6660 2-heptyl-3-hydroxy-4(1H)-quinolone biosynthesis Pnuc_0147 PWY-6661 4-hydroxy-2(1H)-quinolone biosynthesis Pnuc_0148 PWY-5958 acridone alkaloid biosynthesis Pnuc_0148 PWY-6660 2-heptyl-3-hydroxy-4(1H)-quinolone biosynthesis Pnuc_0148 PWY-6661 4-hydroxy-2(1H)-quinolone biosynthesis Pnuc_0149 PWY-1861 formaldehyde assimilation II (RuMP Cycle) Pnuc_0149 PWY-5723 Rubisco shunt Pnuc_0153 PWY-7380 biotin biosynthesis from 8-amino-7-oxononanoate II Pnuc_0156 PWY-7380 biotin biosynthesis from 8-amino-7-oxononanoate II Pnuc_0163 PWY-6386 UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing) Pnuc_0163 PWY-6387 UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing) Pnuc_0164 PWY-5265 peptidoglycan biosynthesis II (staphylococci) Pnuc_0164 PWY-6470 peptidoglycan biosynthesis V (β-lactam resistance) Pnuc_0164 PWY-6471 peptidoglycan biosynthesis IV (Enterococcus faecium) Pnuc_0165 PWY-6386 UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing) Pnuc_0165 PWY-6387 UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing) Pnuc_0167 PWY-5265 peptidoglycan biosynthesis II (staphylococci) Pnuc_0167 PWY-6385 peptidoglycan biosynthesis III (mycobacteria) Pnuc_0167 PWY-6470 peptidoglycan biosynthesis V (β-lactam resistance) Pnuc_0167 PWY-6471 peptidoglycan biosynthesis IV (Enterococcus faecium) Pnuc_0168 PWY-6386 UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing) Pnuc_0168 PWY-6387 UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing) Pnuc_0169 PWY-6386 UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing) Pnuc_0169 PWY-6387 UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing) Pnuc_0179 PWY-5154 L-arginine biosynthesis III (via N-acetyl-L-citrulline) Pnuc_0191 PWY-6654 phosphopantothenate biosynthesis III Pnuc_0204 PWY-6545 pyrimidine deoxyribonucleotides de novo biosynthesis III Pnuc_0204 PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I Pnuc_0204 PWY-7198 pyrimidine deoxyribonucleotides de novo biosynthesis IV Pnuc_0204 PWY-7210 pyrimidine deoxyribonucleotides biosynthesis from CTP Pnuc_0204 PWY-7220 adenosine deoxyribonucleotides de novo biosynthesis II Pnuc_0204 PWY-7222 guanosine deoxyribonucleotides de novo biosynthesis II Pnuc_0204 PWY-7226 guanosine deoxyribonucleotides de novo biosynthesis I Pnuc_0204 PWY-7227 adenosine deoxyribonucleotides de novo biosynthesis Pnuc_0205 PWY-6545 pyrimidine deoxyribonucleotides de novo biosynthesis III Pnuc_0205 PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I Pnuc_0205 PWY-7198 pyrimidine deoxyribonucleotides de novo biosynthesis IV Pnuc_0205 PWY-7210 pyrimidine deoxyribonucleotides biosynthesis from CTP Pnuc_0205 PWY-7220 adenosine deoxyribonucleotides de novo biosynthesis II Pnuc_0205 PWY-7222 guanosine deoxyribonucleotides de novo biosynthesis II Pnuc_0205 PWY-7226 guanosine deoxyribonucleotides de novo biosynthesis I Pnuc_0205 PWY-7227 adenosine deoxyribonucleotides de novo biosynthesis Pnuc_0211 PWY-6163 chorismate biosynthesis from 3-dehydroquinate Pnuc_0211 PWY-6416 quinate degradation II Pnuc_0211 PWY-6707 gallate biosynthesis Pnuc_0217 PWY-6163 chorismate biosynthesis from 3-dehydroquinate Pnuc_0219 PWY-5686 UMP biosynthesis Pnuc_0223 PWY-6893 thiamin diphosphate biosynthesis II (Bacillus) Pnuc_0223 PWY-6894 thiamin diphosphate biosynthesis I (E. coli) Pnuc_0223 PWY-6896 thiamin salvage I Pnuc_0223 PWY-6897 thiamin salvage II Pnuc_0224 PWY-1281 sulfoacetaldehyde degradation I Pnuc_0224 PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type Pnuc_0224 PWY-5482 pyruvate fermentation to acetate II Pnuc_0224 PWY-5485 pyruvate fermentation to acetate IV Pnuc_0224 PWY-5497 purine nucleobases degradation II (anaerobic) Pnuc_0224 PWY-6637 sulfolactate degradation II Pnuc_0224 PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type Pnuc_0227 PWY-1861 formaldehyde assimilation II (RuMP Cycle) Pnuc_0227 PWY-5723 Rubisco shunt Pnuc_0227 PWY-6891 thiazole biosynthesis II (Bacillus) Pnuc_0227 PWY-6892 thiazole biosynthesis I (E. coli) Pnuc_0227 PWY-6901 superpathway of glucose and xylose degradation Pnuc_0227 PWY-7560 methylerythritol phosphate pathway II Pnuc_0228 PWY-1042 glycolysis IV (plant cytosol) Pnuc_0228 PWY-5484 glycolysis II (from fructose 6-phosphate) Pnuc_0228 PWY-6901 superpathway of glucose and xylose degradation Pnuc_0228 PWY-7003 glycerol degradation to butanol Pnuc_0231 PWY-2941 L-lysine biosynthesis II Pnuc_0231 PWY-2942 L-lysine biosynthesis III Pnuc_0231 PWY-5097 L-lysine biosynthesis VI Pnuc_0239 PWY-5188 tetrapyrrole biosynthesis I (from glutamate) Pnuc_0246 PWY-5686 UMP biosynthesis Pnuc_0253 PWY-3221 dTDP-L-rhamnose biosynthesis II Pnuc_0253 PWY-6808 dTDP-D-forosamine biosynthesis Pnuc_0253 PWY-6942 dTDP-D-desosamine biosynthesis Pnuc_0253 PWY-6953 dTDP-3-acetamido-3,6-dideoxy-α-D-galactose biosynthesis Pnuc_0253 PWY-6973 dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis Pnuc_0253 PWY-6974 dTDP-L-olivose biosynthesis Pnuc_0253 PWY-6976 dTDP-L-mycarose biosynthesis Pnuc_0253 PWY-7104 dTDP-L-megosamine biosynthesis Pnuc_0253 PWY-7301 dTDP-β-L-noviose biosynthesis Pnuc_0253 PWY-7312 dTDP-D-β-fucofuranose biosynthesis Pnuc_0253 PWY-7315 dTDP-N-acetylthomosamine biosynthesis Pnuc_0253 PWY-7316 dTDP-N-acetylviosamine biosynthesis Pnuc_0253 PWY-7318 dTDP-3-acetamido-3,6-dideoxy-α-D-glucose biosynthesis Pnuc_0253 PWY-7413 dTDP-6-deoxy-α-D-allose biosynthesis Pnuc_0253 PWY-7414 dTDP-α-D-mycaminose biosynthesis Pnuc_0253 PWY-7440 dTDP-β-L-4-epi-vancosamine biosynthesis Pnuc_0255 PWY-3221 dTDP-L-rhamnose biosynthesis II Pnuc_0255 PWY-6808 dTDP-D-forosamine biosynthesis Pnuc_0255 PWY-6942 dTDP-D-desosamine biosynthesis Pnuc_0255 PWY-6953 dTDP-3-acetamido-3,6-dideoxy-α-D-galactose biosynthesis Pnuc_0255 PWY-6973 dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis Pnuc_0255 PWY-6974 dTDP-L-olivose biosynthesis Pnuc_0255 PWY-6976 dTDP-L-mycarose biosynthesis Pnuc_0255 PWY-7104 dTDP-L-megosamine biosynthesis Pnuc_0255 PWY-7301 dTDP-β-L-noviose biosynthesis Pnuc_0255 PWY-7312 dTDP-D-β-fucofuranose biosynthesis Pnuc_0255 PWY-7315 dTDP-N-acetylthomosamine biosynthesis Pnuc_0255 PWY-7316 dTDP-N-acetylviosamine biosynthesis Pnuc_0255 PWY-7318 dTDP-3-acetamido-3,6-dideoxy-α-D-glucose biosynthesis Pnuc_0255 PWY-7413 dTDP-6-deoxy-α-D-allose biosynthesis Pnuc_0255 PWY-7414 dTDP-α-D-mycaminose biosynthesis Pnuc_0255 PWY-7440 dTDP-β-L-4-epi-vancosamine biosynthesis Pnuc_0265 PWY-6167 flavin biosynthesis II (archaea) Pnuc_0265 PWY-6168 flavin biosynthesis III (fungi) Pnuc_0266 PWY-6167 flavin biosynthesis II (archaea) Pnuc_0266 PWY-6168 flavin biosynthesis III (fungi) Pnuc_0266 PWY-7539 6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia) Pnuc_0271 PWY-6167 flavin biosynthesis II (archaea) Pnuc_0271 PWY-6168 flavin biosynthesis III (fungi) Pnuc_0271 PWY-7219 adenosine ribonucleotides de novo biosynthesis Pnuc_0272 PWY-6703 preQ0 biosynthesis Pnuc_0279 PWY-1622 formaldehyde assimilation I (serine pathway) Pnuc_0279 PWY-181 photorespiration Pnuc_0279 PWY-2161 folate polyglutamylation Pnuc_0279 PWY-2201 folate transformations I Pnuc_0279 PWY-3661 glycine betaine degradation I Pnuc_0279 PWY-3661-1 glycine betaine degradation II (mammalian) Pnuc_0279 PWY-3841 folate transformations II Pnuc_0279 PWY-5497 purine nucleobases degradation II (anaerobic) Pnuc_0281 PWY-7219 adenosine ribonucleotides de novo biosynthesis Pnuc_0282 PWY-1269 CMP-3-deoxy-D-manno-octulosonate biosynthesis I Pnuc_0282 PWY-5111 CMP-3-deoxy-D-manno-octulosonate biosynthesis II (from D-arabinose 5-phosphate) Pnuc_0289 PWY-6386 UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing) Pnuc_0289 PWY-6387 UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing) Pnuc_0295 PWY-5663 tetrahydrobiopterin biosynthesis I Pnuc_0295 PWY-5664 tetrahydrobiopterin biosynthesis II Pnuc_0295 PWY-6147 6-hydroxymethyl-dihydropterin diphosphate biosynthesis I Pnuc_0295 PWY-6703 preQ0 biosynthesis Pnuc_0295 PWY-6983 tetrahydrobiopterin biosynthesis III Pnuc_0295 PWY-7442 drosopterin and aurodrosopterin biosynthesis Pnuc_0301 PWY-5659 GDP-mannose biosynthesis Pnuc_0301 PWY-6073 alginate biosynthesis I (algal) Pnuc_0301 PWY-6082 alginate biosynthesis II (bacterial) Pnuc_0301 PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) Pnuc_0302 PWY-5738 GDP-6-deoxy-D-talose biosynthesis Pnuc_0302 PWY-5739 GDP-D-perosamine biosynthesis Pnuc_0302 PWY-5740 GDP-L-colitose biosynthesis Pnuc_0302 PWY-66 GDP-L-fucose biosynthesis I (from GDP-D-mannose) Pnuc_0303 PWY-66 GDP-L-fucose biosynthesis I (from GDP-D-mannose) Pnuc_0310 PWY-6655 xanthan biosynthesis Pnuc_0310 PWY-6658 acetan biosynthesis Pnuc_0316 PWY-5265 peptidoglycan biosynthesis II (staphylococci) Pnuc_0316 PWY-6470 peptidoglycan biosynthesis V (β-lactam resistance) Pnuc_0316 PWY-6471 peptidoglycan biosynthesis IV (Enterococcus faecium) Pnuc_0328 PWY-6386 UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing) Pnuc_0328 PWY-6387 UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing) Pnuc_0334 PWY-5340 sulfate activation for sulfonation Pnuc_0340 PWY-7377 cob(II)yrinate a,c-diamide biosynthesis I (early cobalt insertion) Pnuc_0343 PWY-5194 siroheme biosynthesis Pnuc_0343 PWY-7377 cob(II)yrinate a,c-diamide biosynthesis I (early cobalt insertion) Pnuc_0345 PWY-6683 sulfate reduction III (assimilatory) Pnuc_0353 PWY-3722 glycine betaine biosynthesis II (Gram-positive bacteria) Pnuc_0353 PWY-7494 choline degradation IV Pnuc_0366 PWY-5913 TCA cycle VI (obligate autotrophs) Pnuc_0366 PWY-6549 L-glutamine biosynthesis III Pnuc_0366 PWY-6728 methylaspartate cycle Pnuc_0366 PWY-6969 TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase) Pnuc_0366 PWY-7124 ethylene biosynthesis V (engineered) Pnuc_0366 PWY-7254 TCA cycle VII (acetate-producers) Pnuc_0366 PWY-7268 NAD/NADP-NADH/NADPH cytosolic interconversion (yeast) Pnuc_0376 PWY-7158 L-phenylalanine degradation V Pnuc_0380 PWY-3841 folate transformations II Pnuc_0380 PWY-6614 tetrahydrofolate biosynthesis Pnuc_0381 PWY-3841 folate transformations II Pnuc_0381 PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I Pnuc_0381 PWY-7187 pyrimidine deoxyribonucleotides de novo biosynthesis II Pnuc_0381 PWY-7198 pyrimidine deoxyribonucleotides de novo biosynthesis IV Pnuc_0381 PWY-7199 pyrimidine deoxyribonucleosides salvage Pnuc_0381 PWY-7210 pyrimidine deoxyribonucleotides biosynthesis from CTP Pnuc_0382 PWY-101 photosynthesis light reactions Pnuc_0382 PWY-7230 ubiquinol-6 biosynthesis from 4-aminobenzoate (eukaryotic) Pnuc_0386 PWY-6823 molybdenum cofactor biosynthesis Pnuc_0387 PWY-5964 guanylyl molybdenum cofactor biosynthesis Pnuc_0388 PWY-6823 molybdenum cofactor biosynthesis Pnuc_0398 PWY-4381 fatty acid biosynthesis initiation I Pnuc_0399 PWY-4381 fatty acid biosynthesis initiation I Pnuc_0399 PWY-6799 fatty acid biosynthesis (plant mitochondria) Pnuc_0399 PWY-7388 octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) Pnuc_0400 PWY-5367 petroselinate biosynthesis Pnuc_0400 PWY-5971 palmitate biosynthesis II (bacteria and plants) Pnuc_0400 PWY-5973 cis-vaccenate biosynthesis Pnuc_0400 PWY-5989 stearate biosynthesis II (bacteria and plants) Pnuc_0400 PWY-5994 palmitate biosynthesis I (animals and fungi) Pnuc_0400 PWY-6113 superpathway of mycolate biosynthesis Pnuc_0400 PWY-6282 palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate) Pnuc_0400 PWY-6519 8-amino-7-oxononanoate biosynthesis I Pnuc_0400 PWY-6951 Pnuc_0400 Pnuc_0400 PWY-7053 docosahexaenoate biosynthesis I (lower eukaryotes) Pnuc_0400 PWY-7388 octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) Pnuc_0400 PWYG-321 mycolate biosynthesis Pnuc_0410 PWY-6012 acyl carrier protein metabolism I Pnuc_0410 PWY-6012-1 acyl carrier protein metabolism II (mammalian) Pnuc_0411 PWY-6902 chitin degradation II Pnuc_0416 PWY-5269 cardiolipin biosynthesis II Pnuc_0416 PWY-5668 cardiolipin biosynthesis I Pnuc_0440 PWY-6823 molybdenum cofactor biosynthesis Pnuc_0442 PWY-6823 molybdenum cofactor biosynthesis Pnuc_0445 PWY-4041 γ-glutamyl cycle Pnuc_0445 PWY-5826 hypoglycin biosynthesis Pnuc_0453 PWY-3781 aerobic respiration I (cytochrome c) Pnuc_0453 PWY-4521 arsenite oxidation I (respiratory) Pnuc_0453 PWY-6692 Fe(II) oxidation Pnuc_0453 PWY-7279 aerobic respiration II (cytochrome c) (yeast) Pnuc_0454 PWY-3781 aerobic respiration I (cytochrome c) Pnuc_0454 PWY-4521 arsenite oxidation I (respiratory) Pnuc_0454 PWY-6692 Fe(II) oxidation Pnuc_0454 PWY-7279 aerobic respiration II (cytochrome c) (yeast) Pnuc_0465 PWY-1361 benzoyl-CoA degradation I (aerobic) Pnuc_0465 PWY-5109 2-methylbutanoate biosynthesis Pnuc_0465 PWY-5136 fatty acid β-oxidation II (peroxisome) Pnuc_0465 PWY-5138 unsaturated, even numbered fatty acid β-oxidation Pnuc_0465 PWY-5177 glutaryl-CoA degradation Pnuc_0465 PWY-5789 3-hydroxypropanoate/4-hydroxybutanate cycle Pnuc_0465 PWY-6435 4-hydroxybenzoate biosynthesis V Pnuc_0465 PWY-6583 pyruvate fermentation to butanol I Pnuc_0465 PWY-6863 pyruvate fermentation to hexanol Pnuc_0465 PWY-6883 pyruvate fermentation to butanol II Pnuc_0465 PWY-6944 androstenedione degradation Pnuc_0465 PWY-6945 cholesterol degradation to androstenedione I (cholesterol oxidase) Pnuc_0465 PWY-6946 cholesterol degradation to androstenedione II (cholesterol dehydrogenase) Pnuc_0465 PWY-7007 methyl ketone biosynthesis Pnuc_0465 PWY-7046 4-coumarate degradation (anaerobic) Pnuc_0465 PWY-7094 fatty acid salvage Pnuc_0465 PWY-7216 (R)- and (S)-3-hydroxybutanoate biosynthesis Pnuc_0465 PWY-735 jasmonic acid biosynthesis Pnuc_0465 PWY-7401 crotonate fermentation (to acetate and cyclohexane carboxylate) Pnuc_0471 PWY-1361 benzoyl-CoA degradation I (aerobic) Pnuc_0471 PWY-5109 2-methylbutanoate biosynthesis Pnuc_0471 PWY-5136 fatty acid β-oxidation II (peroxisome) Pnuc_0471 PWY-5138 unsaturated, even numbered fatty acid β-oxidation Pnuc_0471 PWY-5177 glutaryl-CoA degradation Pnuc_0471 PWY-5789 3-hydroxypropanoate/4-hydroxybutanate cycle Pnuc_0471 PWY-6435 4-hydroxybenzoate biosynthesis V Pnuc_0471 PWY-6583 pyruvate fermentation to butanol I Pnuc_0471 PWY-6863 pyruvate fermentation to hexanol Pnuc_0471 PWY-6883 pyruvate fermentation to butanol II Pnuc_0471 PWY-6944 androstenedione degradation Pnuc_0471 PWY-6945 cholesterol degradation to androstenedione I (cholesterol oxidase) Pnuc_0471 PWY-6946 cholesterol degradation to androstenedione II (cholesterol dehydrogenase) Pnuc_0471 PWY-7007 methyl ketone biosynthesis Pnuc_0471 PWY-7046 4-coumarate degradation (anaerobic) Pnuc_0471 PWY-7094 fatty acid salvage Pnuc_0471 PWY-7216 (R)- and (S)-3-hydroxybutanoate biosynthesis Pnuc_0471 PWY-735 jasmonic acid biosynthesis Pnuc_0471 PWY-7401 crotonate fermentation (to acetate and cyclohexane carboxylate) Pnuc_0491 PWY-5855 ubiquinol-7 biosynthesis (prokaryotic) Pnuc_0491 PWY-5856 ubiquinol-9 biosynthesis (prokaryotic) Pnuc_0491 PWY-5857 ubiquinol-10 biosynthesis (prokaryotic) Pnuc_0491 PWY-5870 ubiquinol-8 biosynthesis (eukaryotic) Pnuc_0491 PWY-5871 ubiquinol-9 biosynthesis (eukaryotic) Pnuc_0491 PWY-5872 ubiquinol-10 biosynthesis (eukaryotic) Pnuc_0491 PWY-5873 ubiquinol-7 biosynthesis (eukaryotic) Pnuc_0491 PWY-6708 ubiquinol-8 biosynthesis (prokaryotic) Pnuc_0491 PWY-7230 ubiquinol-6 biosynthesis from 4-aminobenzoate (eukaryotic) Pnuc_0491 PWY-7233 ubiquinol-6 bypass biosynthesis (eukaryotic) Pnuc_0495 PWY-3461 L-tyrosine biosynthesis II Pnuc_0495 PWY-3462 L-phenylalanine biosynthesis II Pnuc_0495 PWY-6120 L-tyrosine biosynthesis III Pnuc_0495 PWY-6627 salinosporamide A biosynthesis Pnuc_0495 PWY-7432 L-phenylalanine biosynthesis III (cytosolic, plants) Pnuc_0498 PWY-6163 chorismate biosynthesis from 3-dehydroquinate Pnuc_0499 PWY-7205 CMP phosphorylation Pnuc_0503 PWY-7346 UDP-α-D-glucuronate biosynthesis (from UDP-glucose) Pnuc_0508 PWY-6936 seleno-amino acid biosynthesis Pnuc_0519 PWY-6829 tRNA methylation (yeast) Pnuc_0519 PWY-7285 methylwyosine biosynthesis Pnuc_0519 PWY-7286 7-(3-amino-3-carboxypropyl)-wyosine biosynthesis Pnuc_0540 PWY-5392 reductive TCA cycle II Pnuc_0540 PWY-5537 pyruvate fermentation to acetate V Pnuc_0540 PWY-5538 pyruvate fermentation to acetate VI Pnuc_0540 PWY-5690 TCA cycle II (plants and fungi) Pnuc_0540 PWY-5913 TCA cycle VI (obligate autotrophs) Pnuc_0540 PWY-6728 methylaspartate cycle Pnuc_0540 PWY-6969 TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase) Pnuc_0540 PWY-7384 anaerobic energy metabolism (invertebrates, mitochondrial) Pnuc_0547 PWY-6745 phytochelatins biosynthesis Pnuc_0550 PWY-6857 retinol biosynthesis Pnuc_0600 PWY-6386 UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing) Pnuc_0600 PWY-6387 UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing) Pnuc_0602 PWY-6832 2-aminoethylphosphonate degradation II Pnuc_0615 PWY-5381 pyridine nucleotide cycling (plants) Pnuc_0615 PWY-5653 NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde Pnuc_0616 PWY-5531 chlorophyllide a biosynthesis II (anaerobic) Pnuc_0616 PWY-7159 chlorophyllide a biosynthesis III (aerobic, light independent) Pnuc_0617 PWY-6121 5-aminoimidazole ribonucleotide biosynthesis I Pnuc_0617 PWY-6122 5-aminoimidazole ribonucleotide biosynthesis II Pnuc_0617 PWY-6277 superpathway of 5-aminoimidazole ribonucleotide biosynthesis Pnuc_0623 PWY-5988 wound-induced proteolysis I Pnuc_0623 PWY-6018 seed germination protein turnover Pnuc_0637 PWY-6695 oxalate degradation II Pnuc_0637 PWY-6696 oxalate degradation III Pnuc_0638 PWY-6695 oxalate degradation II Pnuc_0640 PWY-6695 oxalate degradation II Pnuc_0649 PWY-7187 pyrimidine deoxyribonucleotides de novo biosynthesis II Pnuc_0652 PWY-5155 β-alanine biosynthesis III Pnuc_0655 PWY-4983 L-citrulline-nitric oxide cycle Pnuc_0655 PWY-4984 urea cycle Pnuc_0655 PWY-5 canavanine biosynthesis Pnuc_0655 PWY-5154 L-arginine biosynthesis III (via N-acetyl-L-citrulline) Pnuc_0655 PWY-7400 L-arginine biosynthesis IV (archaebacteria) Pnuc_0656 PWY-5188 tetrapyrrole biosynthesis I (from glutamate) Pnuc_0656 PWY-5189 tetrapyrrole biosynthesis II (from glycine) Pnuc_0657 PWY-5188 tetrapyrrole biosynthesis I (from glutamate) Pnuc_0657 PWY-5189 tetrapyrrole biosynthesis II (from glycine) Pnuc_0658 PWY-5755 4-hydroxybenzoate biosynthesis II (microbes) Pnuc_0658 PWY-5870 ubiquinol-8 biosynthesis (eukaryotic) Pnuc_0658 PWY-6148 tetrahydromethanopterin biosynthesis Pnuc_0663 PWY-7204 pyridoxal 5'-phosphate salvage II (plants) Pnuc_0663 PWY-7282 4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast) Pnuc_0669 PWY-5484 glycolysis II (from fructose 6-phosphate) Pnuc_0670 PWY-7052 cyanophycin metabolism Pnuc_0671 PWY-7052 cyanophycin metabolism Pnuc_0680 PWY-5101 L-isoleucine biosynthesis II Pnuc_0680 PWY-5103 L-isoleucine biosynthesis III Pnuc_0680 PWY-5104 L-isoleucine biosynthesis IV Pnuc_0680 PWY-7111 pyruvate fermentation to isobutanol (engineered) Pnuc_0692 PWY-6281 L-selenocysteine biosynthesis II (archaea and eukaryotes) Pnuc_0728 PWY-5274 sulfide oxidation II (sulfide dehydrogenase) Pnuc_0731 PWY-1722 formate reduction to 5,10-methylenetetrahydrofolate Pnuc_0731 PWY-2201 folate transformations I Pnuc_0731 PWY-3841 folate transformations II Pnuc_0731 PWY-5030 L-histidine degradation III Pnuc_0731 PWY-5497 purine nucleobases degradation II (anaerobic) Pnuc_0731 PWY-6613 tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate Pnuc_0734 PWY-6891 thiazole biosynthesis II (Bacillus) Pnuc_0734 PWY-6892 thiazole biosynthesis I (E. coli) Pnuc_0734 PWY-7560 methylerythritol phosphate pathway II Pnuc_0736 PWY-5046 2-oxoisovalerate decarboxylation to isobutanoyl-CoA Pnuc_0736 PWY-5084 2-oxoglutarate decarboxylation to succinyl-CoA Pnuc_0741 PWY-5686 UMP biosynthesis Pnuc_0745 PWY-5958 acridone alkaloid biosynthesis Pnuc_0745 PWY-6660 2-heptyl-3-hydroxy-4(1H)-quinolone biosynthesis Pnuc_0745 PWY-6661 4-hydroxy-2(1H)-quinolone biosynthesis Pnuc_0750 PWY-1361 benzoyl-CoA degradation I (aerobic) Pnuc_0750 PWY-5109 2-methylbutanoate biosynthesis Pnuc_0750 PWY-5136 fatty acid β-oxidation II (peroxisome) Pnuc_0750 PWY-5138 unsaturated, even numbered fatty acid β-oxidation Pnuc_0750 PWY-5177 glutaryl-CoA degradation Pnuc_0750 PWY-5789 3-hydroxypropanoate/4-hydroxybutanate cycle Pnuc_0750 PWY-6435 4-hydroxybenzoate biosynthesis V Pnuc_0750 PWY-6583 pyruvate fermentation to butanol I Pnuc_0750 PWY-6863 pyruvate fermentation to hexanol Pnuc_0750 PWY-6883 pyruvate fermentation to butanol II Pnuc_0750 PWY-6944 androstenedione degradation Pnuc_0750 PWY-6945 cholesterol degradation to androstenedione I (cholesterol oxidase) Pnuc_0750 PWY-6946 cholesterol degradation to androstenedione II (cholesterol dehydrogenase) Pnuc_0750 PWY-7007 methyl ketone biosynthesis Pnuc_0750 PWY-7046 4-coumarate degradation (anaerobic) Pnuc_0750 PWY-7094 fatty acid salvage Pnuc_0750 PWY-7216 (R)- and (S)-3-hydroxybutanoate biosynthesis Pnuc_0750 PWY-735 jasmonic acid biosynthesis Pnuc_0750 PWY-7401 crotonate fermentation (to acetate and cyclohexane carboxylate) Pnuc_0756 PWY-1622 formaldehyde assimilation I (serine pathway) Pnuc_0756 PWY-5392 reductive TCA cycle II Pnuc_0756 PWY-561 superpathway of glyoxylate cycle and fatty acid degradation Pnuc_0756 PWY-5690 TCA cycle II (plants and fungi) Pnuc_0756 PWY-5913 TCA cycle VI (obligate autotrophs) Pnuc_0756 PWY-6728 methylaspartate cycle Pnuc_0756 PWY-6969 TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase) Pnuc_0756 PWY-7115 C4 photosynthetic carbon assimilation cycle, NAD-ME type Pnuc_0756 PWY-7383 anaerobic energy metabolism (invertebrates, cytosol) Pnuc_0760 PWY-3781 aerobic respiration I (cytochrome c) Pnuc_0760 PWY-4302 aerobic respiration III (alternative oxidase pathway) Pnuc_0760 PWY-561 superpathway of glyoxylate cycle and fatty acid degradation Pnuc_0760 PWY-5690 TCA cycle II (plants and fungi) Pnuc_0760 PWY-6728 methylaspartate cycle Pnuc_0760 PWY-6969 TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase) Pnuc_0760 PWY-7254 TCA cycle VII (acetate-producers) Pnuc_0760 PWY-7279 aerobic respiration II (cytochrome c) (yeast) Pnuc_0761 PWY-3781 aerobic respiration I (cytochrome c) Pnuc_0761 PWY-4302 aerobic respiration III (alternative oxidase pathway) Pnuc_0761 PWY-561 superpathway of glyoxylate cycle and fatty acid degradation Pnuc_0761 PWY-5690 TCA cycle II (plants and fungi) Pnuc_0761 PWY-6728 methylaspartate cycle Pnuc_0761 PWY-6969 TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase) Pnuc_0761 PWY-7254 TCA cycle VII (acetate-producers) Pnuc_0761 PWY-7279 aerobic respiration II (cytochrome c) (yeast) Pnuc_0767 PWY-7396 butanol and isobutanol biosynthesis (engineered) Pnuc_0768 PWY-2941 L-lysine biosynthesis II Pnuc_0768 PWY-2942 L-lysine biosynthesis III Pnuc_0768 PWY-5097 L-lysine biosynthesis VI Pnuc_0768 PWY-5154 L-arginine biosynthesis III (via N-acetyl-L-citrulline) Pnuc_0768 PWY-6559 spermidine biosynthesis II Pnuc_0768 PWY-6562 norspermidine biosynthesis Pnuc_0768 PWY-7153 grixazone biosynthesis Pnuc_0768 PWY-7400 L-arginine biosynthesis IV (archaebacteria) Pnuc_0774 PWY-4381 fatty acid biosynthesis initiation I Pnuc_0774 PWY-5743 3-hydroxypropanoate cycle Pnuc_0774 PWY-5744 glyoxylate assimilation Pnuc_0774 PWY-5789 3-hydroxypropanoate/4-hydroxybutanate cycle Pnuc_0774 PWY-6679 jadomycin biosynthesis Pnuc_0774 PWY-7388 octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) Pnuc_0775 PWY-2161 folate polyglutamylation Pnuc_0778 PWY-6121 5-aminoimidazole ribonucleotide biosynthesis I Pnuc_0778 PWY-6122 5-aminoimidazole ribonucleotide biosynthesis II Pnuc_0778 PWY-6277 superpathway of 5-aminoimidazole ribonucleotide biosynthesis Pnuc_0778 PWY-7282 4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast) Pnuc_0823 PWY-5386 methylglyoxal degradation I Pnuc_0840 PWY-5084 2-oxoglutarate decarboxylation to succinyl-CoA Pnuc_0841 PWY-5084 2-oxoglutarate decarboxylation to succinyl-CoA Pnuc_0842 PWY-5046 2-oxoisovalerate decarboxylation to isobutanoyl-CoA Pnuc_0842 PWY-5084 2-oxoglutarate decarboxylation to succinyl-CoA Pnuc_0847 PWY-2941 L-lysine biosynthesis II Pnuc_0847 PWY-2942 L-lysine biosynthesis III Pnuc_0847 PWY-5097 L-lysine biosynthesis VI Pnuc_0852 PWY-6936 seleno-amino acid biosynthesis Pnuc_0852 PWY-7274 D-cycloserine biosynthesis Pnuc_0854 PWY-2301 myo-inositol biosynthesis Pnuc_0854 PWY-4702 phytate degradation I Pnuc_0854 PWY-6363 D-myo-inositol (1,4,5)-trisphosphate degradation Pnuc_0860 PWY-4381 fatty acid biosynthesis initiation I Pnuc_0860 PWY-5743 3-hydroxypropanoate cycle Pnuc_0860 PWY-5744 glyoxylate assimilation Pnuc_0860 PWY-5789 3-hydroxypropanoate/4-hydroxybutanate cycle Pnuc_0860 PWY-6679 jadomycin biosynthesis Pnuc_0860 PWY-7388 octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) Pnuc_0862 PWY-2941 L-lysine biosynthesis II Pnuc_0862 PWY-2942 L-lysine biosynthesis III Pnuc_0862 PWY-5097 L-lysine biosynthesis VI Pnuc_0862 PWY-6559 spermidine biosynthesis II Pnuc_0862 PWY-6562 norspermidine biosynthesis Pnuc_0862 PWY-7153 grixazone biosynthesis Pnuc_0881 PWY-6605 adenine and adenosine salvage II Pnuc_0881 PWY-6610 adenine and adenosine salvage IV Pnuc_0884 PWY-5101 L-isoleucine biosynthesis II Pnuc_0884 PWY-5103 L-isoleucine biosynthesis III Pnuc_0884 PWY-5104 L-isoleucine biosynthesis IV Pnuc_0884 PWY-7111 pyruvate fermentation to isobutanol (engineered) Pnuc_0889 PWY-6910 hydroxymethylpyrimidine salvage Pnuc_0889 PWY-7356 thiamin salvage IV (yeast) Pnuc_0889 PWY-7357 thiamin formation from pyrithiamine and oxythiamine (yeast) Pnuc_0892 PWY-6893 thiamin diphosphate biosynthesis II (Bacillus) Pnuc_0892 PWY-6894 thiamin diphosphate biosynthesis I (E. coli) Pnuc_0892 PWY-6897 thiamin salvage II Pnuc_0892 PWY-6907 thiamin diphosphate biosynthesis III (Staphylococcus) Pnuc_0892 PWY-6908 thiamin diphosphate biosynthesis IV (eukaryotes) Pnuc_0892 PWY-7353 4-methyl-5(β-hydroxyethyl)thiazole salvage (yeast) Pnuc_0892 PWY-7357 thiamin formation from pyrithiamine and oxythiamine (yeast) Pnuc_0893 PWY-6891 thiazole biosynthesis II (Bacillus) Pnuc_0893 PWY-6892 thiazole biosynthesis I (E. coli) Pnuc_0896 PWY-6890 4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis Pnuc_0910 PWY-5743 3-hydroxypropanoate cycle Pnuc_0910 PWY-5789 3-hydroxypropanoate/4-hydroxybutanate cycle Pnuc_0910 PWY-6728 methylaspartate cycle Pnuc_0910 PWY-7384 anaerobic energy metabolism (invertebrates, mitochondrial) Pnuc_0912 PWY-4381 fatty acid biosynthesis initiation I Pnuc_0912 PWY-5743 3-hydroxypropanoate cycle Pnuc_0912 PWY-5744 glyoxylate assimilation Pnuc_0912 PWY-5789 3-hydroxypropanoate/4-hydroxybutanate cycle Pnuc_0912 PWY-6679 jadomycin biosynthesis Pnuc_0912 PWY-7388 octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) Pnuc_0919 PWY-7383 anaerobic energy metabolism (invertebrates, cytosol) Pnuc_0924 PWY-5676 acetyl-CoA fermentation to butanoate II Pnuc_0924 PWY-5741 ethylmalonyl-CoA pathway Pnuc_0924 PWY-7216 (R)- and (S)-3-hydroxybutanoate biosynthesis Pnuc_0930 PWY-7560 methylerythritol phosphate pathway II Pnuc_0931 PWY-7560 methylerythritol phosphate pathway II Pnuc_0940 PWY-6121 5-aminoimidazole ribonucleotide biosynthesis I Pnuc_0940 PWY-6122 5-aminoimidazole ribonucleotide biosynthesis II Pnuc_0940 PWY-6277 superpathway of 5-aminoimidazole ribonucleotide biosynthesis Pnuc_0942 PWY-5747 2-methylcitrate cycle II Pnuc_0945 PWY-7176 UTP and CTP de novo biosynthesis Pnuc_0945 PWY-7177 UTP and CTP dephosphorylation II Pnuc_0945 PWY-7185 UTP and CTP dephosphorylation I Pnuc_0946 PWY-1269 CMP-3-deoxy-D-manno-octulosonate biosynthesis I Pnuc_0946 PWY-5111 CMP-3-deoxy-D-manno-octulosonate biosynthesis II (from D-arabinose 5-phosphate) Pnuc_0947 PWY-1042 glycolysis IV (plant cytosol) Pnuc_0947 PWY-1622 formaldehyde assimilation I (serine pathway) Pnuc_0947 PWY-2221 Entner-Doudoroff pathway III (semi-phosphorylative) Pnuc_0947 PWY-5484 glycolysis II (from fructose 6-phosphate) Pnuc_0947 PWY-5723 Rubisco shunt Pnuc_0947 PWY-6142 gluconeogenesis II (Methanobacterium thermoautotrophicum) Pnuc_0947 PWY-6886 1-butanol autotrophic biosynthesis Pnuc_0947 PWY-6901 superpathway of glucose and xylose degradation Pnuc_0947 PWY-7003 glycerol degradation to butanol Pnuc_0947 PWY-7124 ethylene biosynthesis V (engineered) Pnuc_0947 PWY-7218 photosynthetic 3-hydroxybutanoate biosynthesis (engineered) Pnuc_0950 PWY-5188 tetrapyrrole biosynthesis I (from glutamate) Pnuc_0966 PWY-6545 pyrimidine deoxyribonucleotides de novo biosynthesis III Pnuc_0966 PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I Pnuc_0966 PWY-7187 pyrimidine deoxyribonucleotides de novo biosynthesis II Pnuc_0966 PWY-7197 pyrimidine deoxyribonucleotide phosphorylation Pnuc_0966 PWY-7198 pyrimidine deoxyribonucleotides de novo biosynthesis IV Pnuc_0966 PWY-7210 pyrimidine deoxyribonucleotides biosynthesis from CTP Pnuc_0977 PWY-6163 chorismate biosynthesis from 3-dehydroquinate Pnuc_0980 PWY-6785 hydrogen production VIII Pnuc_0982 PWY-6386 UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing) Pnuc_0982 PWY-6387 UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing) Pnuc_0998 PWY-5194 siroheme biosynthesis Pnuc_0998 PWY-7377 cob(II)yrinate a,c-diamide biosynthesis I (early cobalt insertion) Pnuc_1000 PWY-6683 sulfate reduction III (assimilatory) Pnuc_1011 PWY-6749 CMP-legionaminate biosynthesis I Pnuc_1012 PWY-6614 tetrahydrofolate biosynthesis Pnuc_1018 PWY-5154 L-arginine biosynthesis III (via N-acetyl-L-citrulline) Pnuc_1018 PWY-5686 UMP biosynthesis Pnuc_1018 PWY-7400 L-arginine biosynthesis IV (archaebacteria) Pnuc_1019 PWY-5154 L-arginine biosynthesis III (via N-acetyl-L-citrulline) Pnuc_1019 PWY-5686 UMP biosynthesis Pnuc_1019 PWY-7400 L-arginine biosynthesis IV (archaebacteria) Pnuc_1020 PWY-3941 β-alanine biosynthesis II Pnuc_1020 PWY-5104 L-isoleucine biosynthesis IV Pnuc_1020 PWY-5747 2-methylcitrate cycle II Pnuc_1022 PWY-5386 methylglyoxal degradation I Pnuc_1032 PWY-5921 glutaminyl-tRNAgln biosynthesis via transamidation Pnuc_1035 PWY-5642 2,4-dinitrotoluene degradation Pnuc_1035 PWY-6373 acrylate degradation Pnuc_1039 PWY-3781 aerobic respiration I (cytochrome c) Pnuc_1039 PWY-4302 aerobic respiration III (alternative oxidase pathway) Pnuc_1039 PWY-5083 NAD/NADH phosphorylation and dephosphorylation Pnuc_1039 PWY-6692 Fe(II) oxidation Pnuc_1053 PWY-1042 glycolysis IV (plant cytosol) Pnuc_1053 PWY-5484 glycolysis II (from fructose 6-phosphate) Pnuc_1053 PWY-6142 gluconeogenesis II (Methanobacterium thermoautotrophicum) Pnuc_1053 PWY-7003 glycerol degradation to butanol Pnuc_1058 PWY-6871 3-methylbutanol biosynthesis Pnuc_1059 PWY-5669 phosphatidylethanolamine biosynthesis I Pnuc_1060 PWY-5669 phosphatidylethanolamine biosynthesis I Pnuc_1061 PWY-5101 L-isoleucine biosynthesis II Pnuc_1061 PWY-5103 L-isoleucine biosynthesis III Pnuc_1061 PWY-5104 L-isoleucine biosynthesis IV Pnuc_1061 PWY-7111 pyruvate fermentation to isobutanol (engineered) Pnuc_1062 PWY-5101 L-isoleucine biosynthesis II Pnuc_1062 PWY-5103 L-isoleucine biosynthesis III Pnuc_1062 PWY-5104 L-isoleucine biosynthesis IV Pnuc_1062 PWY-5938 (R)-acetoin biosynthesis I Pnuc_1062 PWY-5939 (R)-acetoin biosynthesis II Pnuc_1062 PWY-6389 (S)-acetoin biosynthesis Pnuc_1062 PWY-7111 pyruvate fermentation to isobutanol (engineered) Pnuc_1063 PWY-5101 L-isoleucine biosynthesis II Pnuc_1063 PWY-5103 L-isoleucine biosynthesis III Pnuc_1063 PWY-5104 L-isoleucine biosynthesis IV Pnuc_1063 PWY-5938 (R)-acetoin biosynthesis I Pnuc_1063 PWY-5939 (R)-acetoin biosynthesis II Pnuc_1063 PWY-6389 (S)-acetoin biosynthesis Pnuc_1063 PWY-7111 pyruvate fermentation to isobutanol (engineered) Pnuc_1078 PWY-7221 guanosine ribonucleotides de novo biosynthesis Pnuc_1081 PWY-7206 pyrimidine deoxyribonucleotides dephosphorylation Pnuc_1091 PWY-3801 sucrose degradation II (sucrose synthase) Pnuc_1091 PWY-5054 sorbitol biosynthesis I Pnuc_1091 PWY-5384 sucrose degradation IV (sucrose phosphorylase) Pnuc_1091 PWY-5514 UDP-N-acetyl-D-galactosamine biosynthesis II Pnuc_1091 PWY-5659 GDP-mannose biosynthesis Pnuc_1091 PWY-6142 gluconeogenesis II (Methanobacterium thermoautotrophicum) Pnuc_1091 PWY-621 sucrose degradation III (sucrose invertase) Pnuc_1091 PWY-622 starch biosynthesis Pnuc_1091 PWY-6531 mannitol cycle Pnuc_1091 PWY-6981 chitin biosynthesis Pnuc_1091 PWY-7238 sucrose biosynthesis II Pnuc_1091 PWY-7347 sucrose biosynthesis III Pnuc_1091 PWY-7385 1,3-propanediol biosynthesis (engineered) Pnuc_1092 PWY-6749 CMP-legionaminate biosynthesis I Pnuc_1099 PWY-5340 sulfate activation for sulfonation Pnuc_1103 PWY-5316 nicotine biosynthesis Pnuc_1103 PWY-7342 superpathway of nicotine biosynthesis Pnuc_1104 PWY-5316 nicotine biosynthesis Pnuc_1104 PWY-5381 pyridine nucleotide cycling (plants) Pnuc_1104 PWY-5653 NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde Pnuc_1104 PWY-7342 superpathway of nicotine biosynthesis Pnuc_1106 PWY-5316 nicotine biosynthesis Pnuc_1106 PWY-7342 superpathway of nicotine biosynthesis Pnuc_1109 PWY-1881 formate oxidation to CO2 Pnuc_1109 PWY-5497 purine nucleobases degradation II (anaerobic) Pnuc_1109 PWY-6696 oxalate degradation III Pnuc_1138 PWY-6672 cis-genanyl-CoA degradation Pnuc_1138 PWY-7118 chitin degradation to ethanol Pnuc_1139 PWY-5392 reductive TCA cycle II Pnuc_1139 PWY-561 superpathway of glyoxylate cycle and fatty acid degradation Pnuc_1139 PWY-5690 TCA cycle II (plants and fungi) Pnuc_1139 PWY-5913 TCA cycle VI (obligate autotrophs) Pnuc_1139 PWY-6728 methylaspartate cycle Pnuc_1139 PWY-6969 TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase) Pnuc_1139 PWY-7254 TCA cycle VII (acetate-producers) Pnuc_1139 PWY-7384 anaerobic energy metabolism (invertebrates, mitochondrial) Pnuc_1140 PWY-6386 UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing) Pnuc_1140 PWY-6387 UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing) Pnuc_1153 PWY-2201 folate transformations I Pnuc_1153 PWY-5497 purine nucleobases degradation II (anaerobic) Pnuc_1163 PWY-4041 γ-glutamyl cycle Pnuc_1163 PWY-5826 hypoglycin biosynthesis Pnuc_1167 PWY-6788 cellulose degradation II (fungi) Pnuc_1171 PWY-1001 cellulose biosynthesis Pnuc_1173 PWY-7039 phosphatidate metabolism, as a signaling molecule Pnuc_1179 PWY-5921 glutaminyl-tRNAgln biosynthesis via transamidation Pnuc_1184 PWY-5921 glutaminyl-tRNAgln biosynthesis via transamidation Pnuc_1193 PWY-5704 urea degradation II Pnuc_1194 PWY-5704 urea degradation II Pnuc_1196 PWY-5704 urea degradation II Pnuc_1203 PWY-6857 retinol biosynthesis Pnuc_1238 PWY-5971 palmitate biosynthesis II (bacteria and plants) Pnuc_1238 PWY-5973 cis-vaccenate biosynthesis Pnuc_1238 PWY-5989 stearate biosynthesis II (bacteria and plants) Pnuc_1238 PWY-6113 superpathway of mycolate biosynthesis Pnuc_1238 PWY-6282 palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate) Pnuc_1238 PWY-6519 8-amino-7-oxononanoate biosynthesis I Pnuc_1238 PWY-7096 triclosan resistance Pnuc_1238 PWYG-321 mycolate biosynthesis Pnuc_1255 PWY-381 nitrate reduction II (assimilatory) Pnuc_1255 PWY-5675 nitrate reduction V (assimilatory) Pnuc_1255 PWY-6549 L-glutamine biosynthesis III Pnuc_1255 PWY-6963 ammonia assimilation cycle I Pnuc_1255 PWY-6964 ammonia assimilation cycle II Pnuc_1262 PWY-5154 L-arginine biosynthesis III (via N-acetyl-L-citrulline) Pnuc_1264 PWY-1861 formaldehyde assimilation II (RuMP Cycle) Pnuc_1264 PWY-5723 Rubisco shunt Pnuc_1265 PWY-1861 formaldehyde assimilation II (RuMP Cycle) Pnuc_1265 PWY-5723 Rubisco shunt Pnuc_1280 PWY-6728 methylaspartate cycle Pnuc_1280 PWY-6969 TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase) Pnuc_1280 PWY-7118 chitin degradation to ethanol Pnuc_1280 PWY-7294 xylose degradation IV Pnuc_1280 PWY-7295 L-arabinose degradation IV Pnuc_1281 PWY-7219 adenosine ribonucleotides de novo biosynthesis Pnuc_1291 PWY-7560 methylerythritol phosphate pathway II Pnuc_1293 PWY-6545 pyrimidine deoxyribonucleotides de novo biosynthesis III Pnuc_1293 PWY-7176 UTP and CTP de novo biosynthesis Pnuc_1293 PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I Pnuc_1293 PWY-7187 pyrimidine deoxyribonucleotides de novo biosynthesis II Pnuc_1293 PWY-7197 pyrimidine deoxyribonucleotide phosphorylation Pnuc_1293 PWY-7198 pyrimidine deoxyribonucleotides de novo biosynthesis IV Pnuc_1293 PWY-7205 CMP phosphorylation Pnuc_1293 PWY-7210 pyrimidine deoxyribonucleotides biosynthesis from CTP Pnuc_1293 PWY-7220 adenosine deoxyribonucleotides de novo biosynthesis II Pnuc_1293 PWY-7221 guanosine ribonucleotides de novo biosynthesis Pnuc_1293 PWY-7222 guanosine deoxyribonucleotides de novo biosynthesis II Pnuc_1293 PWY-7224 purine deoxyribonucleosides salvage Pnuc_1293 PWY-7226 guanosine deoxyribonucleotides de novo biosynthesis I Pnuc_1293 PWY-7227 adenosine deoxyribonucleotides de novo biosynthesis Pnuc_1299 PWY-5381 pyridine nucleotide cycling (plants) Pnuc_1299 PWY-5695 urate biosynthesis/inosine 5'-phosphate degradation Pnuc_1299 PWY-6596 adenosine nucleotides degradation I Pnuc_1299 PWY-6606 guanosine nucleotides degradation II Pnuc_1299 PWY-6607 guanosine nucleotides degradation I Pnuc_1299 PWY-6608 guanosine nucleotides degradation III Pnuc_1299 PWY-7185 UTP and CTP dephosphorylation I Pnuc_1308 PWY-7219 adenosine ribonucleotides de novo biosynthesis Pnuc_1324 PWY-7425 2-chloroacrylate degradation I Pnuc_1341 PWY-5331 taurine biosynthesis Pnuc_1345 PWY-6281 L-selenocysteine biosynthesis II (archaea and eukaryotes) Pnuc_1367 PWY-6832 2-aminoethylphosphonate degradation II Pnuc_1385 PWY-6854 ethylene biosynthesis III (microbes) Pnuc_1418 PWY-6703 preQ0 biosynthesis Pnuc_1422 PWY-7221 guanosine ribonucleotides de novo biosynthesis Pnuc_1423 PWY-5695 urate biosynthesis/inosine 5'-phosphate degradation Pnuc_1423 PWY-6596 adenosine nucleotides degradation I Pnuc_1423 PWY-7221 guanosine ribonucleotides de novo biosynthesis Pnuc_1433 PWY-5484 glycolysis II (from fructose 6-phosphate) Pnuc_1435 PWY-6857 retinol biosynthesis Pnuc_1440 PWY-5971 palmitate biosynthesis II (bacteria and plants) Pnuc_1440 PWY-5973 cis-vaccenate biosynthesis Pnuc_1440 PWY-5989 stearate biosynthesis II (bacteria and plants) Pnuc_1440 PWY-5994 palmitate biosynthesis I (animals and fungi) Pnuc_1440 PWY-6113 superpathway of mycolate biosynthesis Pnuc_1440 PWY-6282 palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate) Pnuc_1440 PWY-6519 8-amino-7-oxononanoate biosynthesis I Pnuc_1440 PWY-7388 octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) Pnuc_1440 PWYG-321 mycolate biosynthesis Pnuc_1445 PWY-7560 methylerythritol phosphate pathway II Pnuc_1476 PWY-6936 seleno-amino acid biosynthesis Pnuc_1482 PWY-5278 sulfite oxidation III Pnuc_1482 PWY-5340 sulfate activation for sulfonation Pnuc_1482 PWY-6683 sulfate reduction III (assimilatory) Pnuc_1482 PWY-6932 selenate reduction Pnuc_1483 PWY-5278 sulfite oxidation III Pnuc_1483 PWY-5340 sulfate activation for sulfonation Pnuc_1483 PWY-6683 sulfate reduction III (assimilatory) Pnuc_1483 PWY-6932 selenate reduction Pnuc_1493 PWY-6823 molybdenum cofactor biosynthesis Pnuc_1493 PWY-6891 thiazole biosynthesis II (Bacillus) Pnuc_1493 PWY-6892 thiazole biosynthesis I (E. coli) Pnuc_1493 PWY-7250 [2Fe-2S] iron-sulfur cluster biosynthesis Pnuc_1496 PWY-5913 TCA cycle VI (obligate autotrophs) Pnuc_1496 PWY-6318 L-phenylalanine degradation IV (mammalian, via side chain) Pnuc_1496 PWY-6638 sulfolactate degradation III Pnuc_1496 PWY-6642 (R)-cysteate degradation Pnuc_1496 PWY-6643 coenzyme M biosynthesis II Pnuc_1496 PWY-7115 C4 photosynthetic carbon assimilation cycle, NAD-ME type Pnuc_1496 PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type Pnuc_1496 PWY-7383 anaerobic energy metabolism (invertebrates, cytosol) Pnuc_1506 PWY-6969 TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase) Pnuc_1541 PWY-6654 phosphopantothenate biosynthesis III Pnuc_1551 PWY-6891 thiazole biosynthesis II (Bacillus) Pnuc_1551 PWY-6892 thiazole biosynthesis I (E. coli) Pnuc_1551 PWY-7560 methylerythritol phosphate pathway II Pnuc_1559 PWY-5642 2,4-dinitrotoluene degradation Pnuc_1559 PWY-6373 acrylate degradation Pnuc_1562 PWY-3941 β-alanine biosynthesis II Pnuc_1562 PWY-5104 L-isoleucine biosynthesis IV Pnuc_1562 PWY-5747 2-methylcitrate cycle II Pnuc_1587 PWY-7039 phosphatidate metabolism, as a signaling molecule Pnuc_1592 PWY-5491 diethylphosphate degradation Pnuc_1616 PWY-7254 TCA cycle VII (acetate-producers) Pnuc_1618 PWY-5392 reductive TCA cycle II Pnuc_1618 PWY-561 superpathway of glyoxylate cycle and fatty acid degradation Pnuc_1618 PWY-5690 TCA cycle II (plants and fungi) Pnuc_1618 PWY-5913 TCA cycle VI (obligate autotrophs) Pnuc_1618 PWY-6728 methylaspartate cycle Pnuc_1618 PWY-6969 TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase) Pnuc_1618 PWY-7254 TCA cycle VII (acetate-producers) Pnuc_1618 PWY-7384 anaerobic energy metabolism (invertebrates, mitochondrial) Pnuc_1626 PWY-6854 ethylene biosynthesis III (microbes) Pnuc_1656 PWY-6147 6-hydroxymethyl-dihydropterin diphosphate biosynthesis I Pnuc_1656 PWY-6148 tetrahydromethanopterin biosynthesis Pnuc_1656 PWY-6797 6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea) Pnuc_1656 PWY-7539 6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia) Pnuc_1662 PWY-6936 seleno-amino acid biosynthesis Pnuc_1703 PWY-5663 tetrahydrobiopterin biosynthesis I Pnuc_1703 PWY-5664 tetrahydrobiopterin biosynthesis II Pnuc_1703 PWY-6147 6-hydroxymethyl-dihydropterin diphosphate biosynthesis I Pnuc_1703 PWY-6703 preQ0 biosynthesis Pnuc_1703 PWY-6983 tetrahydrobiopterin biosynthesis III Pnuc_1703 PWY-7442 drosopterin and aurodrosopterin biosynthesis Pnuc_1704 PWY-6891 thiazole biosynthesis II (Bacillus) Pnuc_1704 PWY-6892 thiazole biosynthesis I (E. coli) Pnuc_1704 PWY-7560 methylerythritol phosphate pathway II Pnuc_1708 PWY-5350 thiosulfate disproportionation III (rhodanese) Pnuc_1713 PWY-702 L-methionine biosynthesis II Pnuc_1717 PWY-3801 sucrose degradation II (sucrose synthase) Pnuc_1717 PWY-6527 stachyose degradation Pnuc_1717 PWY-6981 chitin biosynthesis Pnuc_1717 PWY-7238 sucrose biosynthesis II Pnuc_1717 PWY-7343 UDP-glucose biosynthesis Pnuc_1722 PWY-5188 tetrapyrrole biosynthesis I (from glutamate) Pnuc_1731 PWY-7560 methylerythritol phosphate pathway II Pnuc_1738 PWY-6121 5-aminoimidazole ribonucleotide biosynthesis I Pnuc_1738 PWY-6613 tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate Pnuc_1739 PWY-5523 5,6-dimethylbenzimidazole biosynthesis Pnuc_1739 PWY-6167 flavin biosynthesis II (archaea) Pnuc_1739 PWY-6168 flavin biosynthesis III (fungi) Pnuc_1743 PWY-6545 pyrimidine deoxyribonucleotides de novo biosynthesis III Pnuc_1743 PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I Pnuc_1743 PWY-7187 pyrimidine deoxyribonucleotides de novo biosynthesis II Pnuc_1743 PWY-7206 pyrimidine deoxyribonucleotides dephosphorylation Pnuc_1746 PWY-5392 reductive TCA cycle II Pnuc_1746 PWY-561 superpathway of glyoxylate cycle and fatty acid degradation Pnuc_1746 PWY-5690 TCA cycle II (plants and fungi) Pnuc_1746 PWY-5913 TCA cycle VI (obligate autotrophs) Pnuc_1746 PWY-6728 methylaspartate cycle Pnuc_1746 PWY-6969 TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase) Pnuc_1746 PWY-7254 TCA cycle VII (acetate-producers) Pnuc_1746 PWY-7384 anaerobic energy metabolism (invertebrates, mitochondrial) Pnuc_1753 PWY-4983 L-citrulline-nitric oxide cycle Pnuc_1753 PWY-4984 urea cycle Pnuc_1753 PWY-5 canavanine biosynthesis Pnuc_1753 PWY-5154 L-arginine biosynthesis III (via N-acetyl-L-citrulline) Pnuc_1753 PWY-7400 L-arginine biosynthesis IV (archaebacteria) Pnuc_1754 PWY-4981 L-proline biosynthesis II (from arginine) Pnuc_1754 PWY-4984 urea cycle Pnuc_1754 PWY-7400 L-arginine biosynthesis IV (archaebacteria) Pnuc_1760 PWY-2781 cis-zeatin biosynthesis Pnuc_1761 PWY-6121 5-aminoimidazole ribonucleotide biosynthesis I Pnuc_1761 PWY-6122 5-aminoimidazole ribonucleotide biosynthesis II Pnuc_1761 PWY-6277 superpathway of 5-aminoimidazole ribonucleotide biosynthesis Pnuc_1766 PWY-6147 6-hydroxymethyl-dihydropterin diphosphate biosynthesis I Pnuc_1766 PWY-6148 tetrahydromethanopterin biosynthesis Pnuc_1766 PWY-6797 6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea) Pnuc_1766 PWY-7539 6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia) Pnuc_1767 PWY-6654 phosphopantothenate biosynthesis III Pnuc_1773 PWY-5083 NAD/NADH phosphorylation and dephosphorylation Pnuc_1773 PWY-7268 NAD/NADP-NADH/NADPH cytosolic interconversion (yeast) Pnuc_1773 PWY-7269 NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast) Pnuc_1779 PWY-1269 CMP-3-deoxy-D-manno-octulosonate biosynthesis I Pnuc_1779 PWY-5111 CMP-3-deoxy-D-manno-octulosonate biosynthesis II (from D-arabinose 5-phosphate) Pnuc_1779 PWY-6164 3-dehydroquinate biosynthesis I Pnuc_1780 PWY-5508 adenosylcobalamin biosynthesis from cobyrinate a,c-diamide II Pnuc_1780 PWY-5509 adenosylcobalamin biosynthesis from cobyrinate a,c-diamide I Pnuc_1780 PWY-6268 adenosylcobalamin salvage from cobalamin Pnuc_1780 PWY-6269 adenosylcobalamin salvage from cobinamide II Pnuc_1781 PWY-6386 UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing) Pnuc_1781 PWY-6387 UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing) Pnuc_1782 PWY-6386 UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing) Pnuc_1782 PWY-6387 UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing) Pnuc_1784 PWY-7383 anaerobic energy metabolism (invertebrates, cytosol) Pnuc_1785 PWY-3341 L-proline biosynthesis III Pnuc_1785 PWY-4981 L-proline biosynthesis II (from arginine) Pnuc_1785 PWY-6344 L-ornithine degradation II (Stickland reaction) Pnuc_1788 PWY-6700 queuosine biosynthesis Pnuc_1789 PWY-6700 queuosine biosynthesis Pnuc_1794 PWY-6123 inosine-5'-phosphate biosynthesis I Pnuc_1794 PWY-6124 inosine-5'-phosphate biosynthesis II Pnuc_1794 PWY-7219 adenosine ribonucleotides de novo biosynthesis Pnuc_1794 PWY-7234 inosine-5'-phosphate biosynthesis III Pnuc_1802 PWY-7426 mannosyl-glycoprotein N-acetylglucosaminyltransferases Pnuc_1810 PWY-5265 peptidoglycan biosynthesis II (staphylococci) Pnuc_1810 PWY-6471 peptidoglycan biosynthesis IV (Enterococcus faecium) Pnuc_1813 PWY-6123 inosine-5'-phosphate biosynthesis I Pnuc_1813 PWY-7234 inosine-5'-phosphate biosynthesis III Pnuc_1814 PWY-6123 inosine-5'-phosphate biosynthesis I Pnuc_1814 PWY-6124 inosine-5'-phosphate biosynthesis II Pnuc_1814 PWY-7234 inosine-5'-phosphate biosynthesis III Pnuc_1815 PWY-1042 glycolysis IV (plant cytosol) Pnuc_1815 PWY-1861 formaldehyde assimilation II (RuMP Cycle) Pnuc_1815 PWY-5484 glycolysis II (from fructose 6-phosphate) Pnuc_1815 PWY-6142 gluconeogenesis II (Methanobacterium thermoautotrophicum) Pnuc_1815 PWY-7385 1,3-propanediol biosynthesis (engineered) Pnuc_1816 PWY-1042 glycolysis IV (plant cytosol) Pnuc_1816 PWY-2221 Entner-Doudoroff pathway III (semi-phosphorylative) Pnuc_1816 PWY-5484 glycolysis II (from fructose 6-phosphate) Pnuc_1816 PWY-5723 Rubisco shunt Pnuc_1816 PWY-6142 gluconeogenesis II (Methanobacterium thermoautotrophicum) Pnuc_1816 PWY-6886 1-butanol autotrophic biosynthesis Pnuc_1816 PWY-6901 superpathway of glucose and xylose degradation Pnuc_1816 PWY-7003 glycerol degradation to butanol Pnuc_1816 PWY-7218 photosynthetic 3-hydroxybutanoate biosynthesis (engineered) Pnuc_1816 PWY-7383 anaerobic energy metabolism (invertebrates, cytosol) Pnuc_1817 PWY-1042 glycolysis IV (plant cytosol) Pnuc_1817 PWY-5484 glycolysis II (from fructose 6-phosphate) Pnuc_1817 PWY-6886 1-butanol autotrophic biosynthesis Pnuc_1817 PWY-6901 superpathway of glucose and xylose degradation Pnuc_1817 PWY-7003 glycerol degradation to butanol Pnuc_1818 PWY-5057 L-valine degradation II Pnuc_1818 PWY-5076 L-leucine degradation III Pnuc_1818 PWY-5078 L-isoleucine degradation II Pnuc_1818 PWY-5101 L-isoleucine biosynthesis II Pnuc_1818 PWY-5103 L-isoleucine biosynthesis III Pnuc_1818 PWY-5104 L-isoleucine biosynthesis IV Pnuc_1818 PWY-5108 L-isoleucine biosynthesis V Pnuc_1830 PWY-5392 reductive TCA cycle II Pnuc_1830 PWY-5537 pyruvate fermentation to acetate V Pnuc_1830 PWY-5538 pyruvate fermentation to acetate VI Pnuc_1830 PWY-5690 TCA cycle II (plants and fungi) Pnuc_1830 PWY-5913 TCA cycle VI (obligate autotrophs) Pnuc_1830 PWY-6728 methylaspartate cycle Pnuc_1830 PWY-6969 TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase) Pnuc_1830 PWY-7384 anaerobic energy metabolism (invertebrates, mitochondrial) Pnuc_1831 PWY-5392 reductive TCA cycle II Pnuc_1831 PWY-5537 pyruvate fermentation to acetate V Pnuc_1831 PWY-5538 pyruvate fermentation to acetate VI Pnuc_1831 PWY-5690 TCA cycle II (plants and fungi) Pnuc_1831 PWY-5913 TCA cycle VI (obligate autotrophs) Pnuc_1831 PWY-6728 methylaspartate cycle Pnuc_1831 PWY-6969 TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase) Pnuc_1831 PWY-7384 anaerobic energy metabolism (invertebrates, mitochondrial) Pnuc_1877 PWY-6123 inosine-5'-phosphate biosynthesis I Pnuc_1877 PWY-6124 inosine-5'-phosphate biosynthesis II Pnuc_1877 PWY-7234 inosine-5'-phosphate biosynthesis III Pnuc_1884 PWY-5154 L-arginine biosynthesis III (via N-acetyl-L-citrulline) Pnuc_1884 PWY-7400 L-arginine biosynthesis IV (archaebacteria) Pnuc_1888 PWY-5686 UMP biosynthesis Pnuc_1897 PWY-5839 menaquinol-7 biosynthesis Pnuc_1897 PWY-5844 menaquinol-9 biosynthesis Pnuc_1897 PWY-5849 menaquinol-6 biosynthesis Pnuc_1897 PWY-5890 menaquinol-10 biosynthesis Pnuc_1897 PWY-5891 menaquinol-11 biosynthesis Pnuc_1897 PWY-5892 menaquinol-12 biosynthesis Pnuc_1897 PWY-5895 menaquinol-13 biosynthesis Pnuc_1899 PWY-6386 UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing) Pnuc_1899 PWY-6387 UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing) Pnuc_1901 PWY-5381 pyridine nucleotide cycling (plants) Pnuc_1901 PWY-5695 urate biosynthesis/inosine 5'-phosphate degradation Pnuc_1901 PWY-6596 adenosine nucleotides degradation I Pnuc_1901 PWY-6606 guanosine nucleotides degradation II Pnuc_1901 PWY-6607 guanosine nucleotides degradation I Pnuc_1901 PWY-6608 guanosine nucleotides degradation III Pnuc_1901 PWY-7185 UTP and CTP dephosphorylation I Pnuc_1902 PWY-6700 queuosine biosynthesis Pnuc_1908 PWY-1269 CMP-3-deoxy-D-manno-octulosonate biosynthesis I Pnuc_1908 PWY-5111 CMP-3-deoxy-D-manno-octulosonate biosynthesis II (from D-arabinose 5-phosphate) Pnuc_1919 PWY-7560 methylerythritol phosphate pathway II Pnuc_1939 PWY-3781 aerobic respiration I (cytochrome c) Pnuc_1939 PWY-4521 arsenite oxidation I (respiratory) Pnuc_1939 PWY-6692 Fe(II) oxidation Pnuc_1939 PWY-7279 aerobic respiration II (cytochrome c) (yeast) Pnuc_1944 PWY-5667 CDP-diacylglycerol biosynthesis I Pnuc_1944 PWY-5981 CDP-diacylglycerol biosynthesis III Pnuc_1948 PWY-1622 formaldehyde assimilation I (serine pathway) Pnuc_1948 PWY-5484 glycolysis II (from fructose 6-phosphate) Pnuc_1961 PWY-6987 lipoate biosynthesis and incorporation III (Bacillus) Pnuc_1961 PWY-7381 lipoate biosynthesis and incorporation (glycine cleavage system, yeast) Pnuc_1961 PWY-7382 lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast) Pnuc_1962 PWY-6987 lipoate biosynthesis and incorporation III (Bacillus) Pnuc_1962 PWY-7381 lipoate biosynthesis and incorporation (glycine cleavage system, yeast) Pnuc_1967 PWY-6987 lipoate biosynthesis and incorporation III (Bacillus) Pnuc_1967 PWY-7381 lipoate biosynthesis and incorporation (glycine cleavage system, yeast) Pnuc_1968 PWY-3961 phosphopantothenate biosynthesis II Pnuc_1979 PWY-2201 folate transformations I Pnuc_1979 PWY-3841 folate transformations II Pnuc_1991 PWY-6749 CMP-legionaminate biosynthesis I Pnuc_1992 PWY-5514 UDP-N-acetyl-D-galactosamine biosynthesis II Pnuc_1994 PWY-6147 6-hydroxymethyl-dihydropterin diphosphate biosynthesis I Pnuc_1994 PWY-6148 tetrahydromethanopterin biosynthesis Pnuc_1994 PWY-6797 6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea) Pnuc_1994 PWY-7539 6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia) Pnuc_2001 PWY-2201 folate transformations I Pnuc_2001 PWY-3841 folate transformations II Pnuc_2002 PWY-5041 S-adenosyl-L-methionine cycle II Pnuc_2003 PWY-5041 S-adenosyl-L-methionine cycle II Pnuc_2003 PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis Pnuc_2006 PWY-2941 L-lysine biosynthesis II Pnuc_2006 PWY-5097 L-lysine biosynthesis VI Pnuc_2007 PWY-5686 UMP biosynthesis Pnuc_2011 PWY-5344 L-homocysteine biosynthesis Pnuc_2013 PWY-5154 L-arginine biosynthesis III (via N-acetyl-L-citrulline) Pnuc_2013 PWY-7400 L-arginine biosynthesis IV (archaebacteria) Pnuc_2019 PWY-5921 glutaminyl-tRNAgln biosynthesis via transamidation Pnuc_2030 PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type Pnuc_2030 PWY-6142 gluconeogenesis II (Methanobacterium thermoautotrophicum) Pnuc_2030 PWY-7115 C4 photosynthetic carbon assimilation cycle, NAD-ME type Pnuc_2030 PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type Pnuc_2046 PWY-7425 2-chloroacrylate degradation I Pnuc_2053 PWY-5506 methanol oxidation to formaldehyde IV Pnuc_2083 PWY-7383 anaerobic energy metabolism (invertebrates, cytosol)