Patl_0005	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Patl_0005	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Patl_0029	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
Patl_0029	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
Patl_0031	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Patl_0062	PWY-7378	aminopropanol phosphate biosynthesis II
Patl_0063	PWY-5350	thiosulfate disproportionation III (rhodanese)
Patl_0066	PWY-5755	4-hydroxybenzoate biosynthesis II (microbes)
Patl_0066	PWY-5870	ubiquinol-8 biosynthesis (eukaryotic)
Patl_0066	PWY-6148	tetrahydromethanopterin biosynthesis
Patl_0080	PWY-622	starch biosynthesis
Patl_0086	PWY-7183	pyrimidine nucleobases salvage I
Patl_0087	PWY-6012	acyl carrier protein metabolism I
Patl_0088	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Patl_0088	PWY-6416	quinate degradation II
Patl_0088	PWY-6707	gallate biosynthesis
Patl_0128	PWY-6807	xyloglucan degradation II (exoglucanase)
Patl_0157	PWY-6967	methylamine degradation I
Patl_0160	PWY-6967	methylamine degradation I
Patl_0201	PWY-1361	benzoyl-CoA degradation I (aerobic)
Patl_0201	PWY-5109	2-methylbutanoate biosynthesis
Patl_0201	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
Patl_0201	PWY-5137	fatty acid &beta;-oxidation III (unsaturated, odd number)
Patl_0201	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
Patl_0201	PWY-5177	glutaryl-CoA degradation
Patl_0201	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Patl_0201	PWY-6435	4-hydroxybenzoate biosynthesis V
Patl_0201	PWY-6583	pyruvate fermentation to butanol I
Patl_0201	PWY-6837	fatty acid beta-oxidation V (unsaturated, odd number, di-isomerase-dependent)
Patl_0201	PWY-6863	pyruvate fermentation to hexanol
Patl_0201	PWY-6883	pyruvate fermentation to butanol II
Patl_0201	PWY-6944	androstenedione degradation
Patl_0201	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
Patl_0201	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
Patl_0201	PWY-7007	methyl ketone biosynthesis
Patl_0201	PWY-7046	4-coumarate degradation (anaerobic)
Patl_0201	PWY-7094	fatty acid salvage
Patl_0201	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
Patl_0201	PWY-7291	oleate &beta;-oxidation (isomerase-dependent, yeast)
Patl_0201	PWY-735	jasmonic acid biosynthesis
Patl_0201	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
Patl_0202	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
Patl_0202	PWY-6435	4-hydroxybenzoate biosynthesis V
Patl_0202	PWY-6863	pyruvate fermentation to hexanol
Patl_0202	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
Patl_0202	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
Patl_0202	PWY-6948	sitosterol degradation to androstenedione
Patl_0202	PWY-7094	fatty acid salvage
Patl_0202	PWY-7288	fatty acid &beta;-oxidation (peroxisome, yeast)
Patl_0202	PWY-7337	10-<i>cis</i>-heptadecenoyl-CoA degradation (yeast)
Patl_0202	PWY-7338	10-<i>trans</i>-heptadecenoyl-CoA degradation (reductase-dependent, yeast)
Patl_0202	PWY-7339	10-<i>trans</i>-heptadecenoyl-CoA degradation (MFE-dependent, yeast)
Patl_0202	PWY-7340	9-<i>cis</i>, 11-<i>trans</i>-octadecadienoyl-CoA degradation (isomerase-dependent, yeast)
Patl_0202	PWY-735	jasmonic acid biosynthesis
Patl_0212	PWY-6832	2-aminoethylphosphonate degradation II
Patl_0215	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Patl_0224	PWY-5723	Rubisco shunt
Patl_0242	PWY-5484	glycolysis II (from fructose 6-phosphate)
Patl_0245	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
Patl_0245	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
Patl_0246	PWY-5381	pyridine nucleotide cycling (plants)
Patl_0266	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Patl_0266	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
Patl_0266	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
Patl_0268	PWY-6123	inosine-5'-phosphate biosynthesis I
Patl_0268	PWY-6124	inosine-5'-phosphate biosynthesis II
Patl_0268	PWY-7234	inosine-5'-phosphate biosynthesis III
Patl_0275	PWY-7425	2-chloroacrylate degradation I
Patl_0301	PWY-5663	tetrahydrobiopterin biosynthesis I
Patl_0301	PWY-5664	tetrahydrobiopterin biosynthesis II
Patl_0301	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
Patl_0301	PWY-6703	preQ<sub>0</sub> biosynthesis
Patl_0301	PWY-6983	tetrahydrobiopterin biosynthesis III
Patl_0301	PWY-7442	drosopterin and aurodrosopterin biosynthesis
Patl_0316	PWY-723	alkylnitronates degradation
Patl_0317	PWY-4381	fatty acid biosynthesis initiation I
Patl_0317	PWY-5743	3-hydroxypropanoate cycle
Patl_0317	PWY-5744	glyoxylate assimilation
Patl_0317	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Patl_0317	PWY-6679	jadomycin biosynthesis
Patl_0317	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Patl_0327	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
Patl_0341	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Patl_0341	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
Patl_0342	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Patl_0342	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
Patl_0347	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
Patl_0361	PWY-6157	autoinducer AI-1 biosynthesis
Patl_0374	PWY-5651	L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
Patl_0374	PWY-6309	L-tryptophan degradation XI (mammalian, via kynurenine)
Patl_0417	PWY-5194	siroheme biosynthesis
Patl_0417	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
Patl_0422	PWY-5874	heme degradation
Patl_0422	PWY-5915	phycoerythrobilin biosynthesis I
Patl_0422	PWY-5917	phycocyanobilin biosynthesis
Patl_0422	PWY-7170	phytochromobilin biosynthesis
Patl_0427	PWY-6174	mevalonate pathway II (archaea)
Patl_0427	PWY-7391	isoprene biosynthesis II (engineered)
Patl_0427	PWY-7524	mevalonate pathway III (archaea)
Patl_0427	PWY-922	mevalonate pathway I
Patl_0481	PWY-5506	methanol oxidation to formaldehyde IV
Patl_0486	PWY-2201	folate transformations I
Patl_0486	PWY-5497	purine nucleobases degradation II (anaerobic)
Patl_0489	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
Patl_0489	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
Patl_0489	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
Patl_0489	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
Patl_0495	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Patl_0496	PWY-5686	UMP biosynthesis
Patl_0518	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
Patl_0518	PWY-6153	autoinducer AI-2 biosynthesis I
Patl_0518	PWY-6154	autoinducer AI-2 biosynthesis II (<i>Vibrio</i>)
Patl_0521	PWY-6672	<i>cis</i>-genanyl-CoA degradation
Patl_0521	PWY-7118	chitin degradation to ethanol
Patl_0533	PWY-7193	pyrimidine ribonucleosides salvage I
Patl_0539	PWY-1622	formaldehyde assimilation I (serine pathway)
Patl_0539	PWY-5392	reductive TCA cycle II
Patl_0539	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
Patl_0539	PWY-5690	TCA cycle II (plants and fungi)
Patl_0539	PWY-5913	TCA cycle VI (obligate autotrophs)
Patl_0539	PWY-6728	methylaspartate cycle
Patl_0539	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Patl_0539	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
Patl_0539	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
Patl_0548	PWY-5663	tetrahydrobiopterin biosynthesis I
Patl_0548	PWY-5664	tetrahydrobiopterin biosynthesis II
Patl_0548	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
Patl_0548	PWY-6703	preQ<sub>0</sub> biosynthesis
Patl_0548	PWY-6983	tetrahydrobiopterin biosynthesis III
Patl_0548	PWY-7442	drosopterin and aurodrosopterin biosynthesis
Patl_0555	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Patl_0555	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Patl_0564	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
Patl_0564	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
Patl_0584	PWY-5686	UMP biosynthesis
Patl_0606	PWY-1622	formaldehyde assimilation I (serine pathway)
Patl_0606	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
Patl_0606	PWY-5913	TCA cycle VI (obligate autotrophs)
Patl_0606	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Patl_0606	PWY-6146	<i>Methanobacterium thermoautotrophicum</i> biosynthetic metabolism
Patl_0606	PWY-6549	L-glutamine biosynthesis III
Patl_0606	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
Patl_0606	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
Patl_0606	PWY-7124	ethylene biosynthesis V (engineered)
Patl_0624	PWY-5101	L-isoleucine biosynthesis II
Patl_0624	PWY-5103	L-isoleucine biosynthesis III
Patl_0624	PWY-5104	L-isoleucine biosynthesis IV
Patl_0624	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
Patl_0624	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
Patl_0624	PWY-6389	(<i>S</i>)-acetoin biosynthesis
Patl_0624	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Patl_0625	PWY-5101	L-isoleucine biosynthesis II
Patl_0625	PWY-5103	L-isoleucine biosynthesis III
Patl_0625	PWY-5104	L-isoleucine biosynthesis IV
Patl_0625	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
Patl_0625	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
Patl_0625	PWY-6389	(<i>S</i>)-acetoin biosynthesis
Patl_0625	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Patl_0626	PWY-7199	pyrimidine deoxyribonucleosides salvage
Patl_0647	PWY-3821	galactose degradation III
Patl_0647	PWY-6317	galactose degradation I (Leloir pathway)
Patl_0647	PWY-6527	stachyose degradation
Patl_0648	PWY-6317	galactose degradation I (Leloir pathway)
Patl_0648	PWY-6527	stachyose degradation
Patl_0653	PWY-5958	acridone alkaloid biosynthesis
Patl_0653	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
Patl_0653	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
Patl_0659	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Patl_0659	PWY-5723	Rubisco shunt
Patl_0665	PWY-6164	3-dehydroquinate biosynthesis I
Patl_0666	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Patl_0747	PWY-6562	norspermidine biosynthesis
Patl_0766	PWY-5506	methanol oxidation to formaldehyde IV
Patl_0790	PWY-6556	pyrimidine ribonucleosides salvage II
Patl_0790	PWY-7181	pyrimidine deoxyribonucleosides degradation
Patl_0790	PWY-7193	pyrimidine ribonucleosides salvage I
Patl_0790	PWY-7199	pyrimidine deoxyribonucleosides salvage
Patl_0793	PWY-5316	nicotine biosynthesis
Patl_0793	PWY-7342	superpathway of nicotine biosynthesis
Patl_0804	PWY-6807	xyloglucan degradation II (exoglucanase)
Patl_0821	PWY-6807	xyloglucan degradation II (exoglucanase)
Patl_0832	PWY-6807	xyloglucan degradation II (exoglucanase)
Patl_0855	PWY-5651	L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
Patl_0855	PWY-6309	L-tryptophan degradation XI (mammalian, via kynurenine)
Patl_0898	PWY-7130	L-glucose degradation
Patl_0899	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
Patl_0899	PWY-6507	4-deoxy-L-<i>threo</i>-hex-4-enopyranuronate degradation
Patl_0899	PWY-7242	D-fructuronate degradation
Patl_0899	PWY-7310	D-glucosaminate degradation
Patl_0921	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
Patl_0921	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
Patl_0921	PWY-6936	seleno-amino acid biosynthesis
Patl_0921	PWY-702	L-methionine biosynthesis II
Patl_0922	PWY-723	alkylnitronates degradation
Patl_0941	PWY-7533	gliotoxin biosynthesis
Patl_0948	PWY-5642	2,4-dinitrotoluene degradation
Patl_0948	PWY-6373	acrylate degradation
Patl_0964	PWY-5674	nitrate reduction IV (dissimilatory)
Patl_0968	PWY-1042	glycolysis IV (plant cytosol)
Patl_0968	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
Patl_0968	PWY-5484	glycolysis II (from fructose 6-phosphate)
Patl_0968	PWY-5723	Rubisco shunt
Patl_0968	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Patl_0968	PWY-6886	1-butanol autotrophic biosynthesis
Patl_0968	PWY-6901	superpathway of glucose and xylose degradation
Patl_0968	PWY-7003	glycerol degradation to butanol
Patl_0968	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
Patl_0968	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
Patl_0970	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
Patl_0971	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
Patl_0971	PWY-6855	chitin degradation I (archaea)
Patl_0971	PWY-6906	chitin derivatives degradation
Patl_0972	PWY-5101	L-isoleucine biosynthesis II
Patl_0972	PWY-5103	L-isoleucine biosynthesis III
Patl_0972	PWY-5104	L-isoleucine biosynthesis IV
Patl_0972	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Patl_0973	PWY-2723	trehalose degradation V
Patl_0973	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
Patl_0973	PWY-5661	GDP-glucose biosynthesis
Patl_0973	PWY-7238	sucrose biosynthesis II
Patl_0973	PWY-7385	1,3-propanediol biosynthesis (engineered)
Patl_0974	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
Patl_0974	PWY-6507	4-deoxy-L-<i>threo</i>-hex-4-enopyranuronate degradation
Patl_0974	PWY-7242	D-fructuronate degradation
Patl_0974	PWY-7310	D-glucosaminate degradation
Patl_0977	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Patl_0978	PWY-4983	L-citrulline-nitric oxide cycle
Patl_0978	PWY-4984	urea cycle
Patl_0978	PWY-5	canavanine biosynthesis
Patl_0978	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Patl_0978	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Patl_0979	PWY-4983	L-citrulline-nitric oxide cycle
Patl_0979	PWY-4984	urea cycle
Patl_0979	PWY-5	canavanine biosynthesis
Patl_0979	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Patl_0979	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Patl_0980	PWY-4981	L-proline biosynthesis II (from arginine)
Patl_0980	PWY-4984	urea cycle
Patl_0980	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Patl_0981	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Patl_0981	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Patl_0982	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Patl_0982	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Patl_0983	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Patl_1019	PWY-5028	L-histidine degradation II
Patl_1019	PWY-5030	L-histidine degradation III
Patl_1021	PWY-5028	L-histidine degradation II
Patl_1021	PWY-5030	L-histidine degradation III
Patl_1022	PWY-5028	L-histidine degradation II
Patl_1022	PWY-5030	L-histidine degradation III
Patl_1025	PWY-381	nitrate reduction II (assimilatory)
Patl_1025	PWY-5675	nitrate reduction V (assimilatory)
Patl_1025	PWY-6549	L-glutamine biosynthesis III
Patl_1025	PWY-6963	ammonia assimilation cycle I
Patl_1025	PWY-6964	ammonia assimilation cycle II
Patl_1030	PWY-5667	CDP-diacylglycerol biosynthesis I
Patl_1030	PWY-5981	CDP-diacylglycerol biosynthesis III
Patl_1030	PWY-7411	superpathway of phosphatidate biosynthesis (yeast)
Patl_1030	PWY-7417	phospholipid remodeling (phosphatidate, yeast)
Patl_1044	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
Patl_1044	PWY-6148	tetrahydromethanopterin biosynthesis
Patl_1044	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
Patl_1044	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
Patl_1045	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
Patl_1045	PWY-6148	tetrahydromethanopterin biosynthesis
Patl_1045	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
Patl_1045	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
Patl_1057	PWY-6857	retinol biosynthesis
Patl_1069	PWY-6788	cellulose degradation II (fungi)
Patl_1070	PWY-6655	xanthan biosynthesis
Patl_1070	PWY-6658	acetan biosynthesis
Patl_1107	PWY-5506	methanol oxidation to formaldehyde IV
Patl_1115	PWY-6891	thiazole biosynthesis II (Bacillus)
Patl_1115	PWY-6892	thiazole biosynthesis I (E. coli)
Patl_1115	PWY-7560	methylerythritol phosphate pathway II
Patl_1127	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
Patl_1127	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
Patl_1130	PWY-5443	aminopropanol phosphate biosynthesis I
Patl_1134	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
Patl_1134	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
Patl_1134	PWY-6268	adenosylcobalamin salvage from cobalamin
Patl_1134	PWY-6269	adenosylcobalamin salvage from cobinamide II
Patl_1137	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
Patl_1137	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
Patl_1137	PWY-6269	adenosylcobalamin salvage from cobinamide II
Patl_1138	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
Patl_1138	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
Patl_1138	PWY-6269	adenosylcobalamin salvage from cobinamide II
Patl_1139	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
Patl_1139	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
Patl_1139	PWY-6269	adenosylcobalamin salvage from cobinamide II
Patl_1202	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Patl_1202	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Patl_1213	PWY-6728	methylaspartate cycle
Patl_1213	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Patl_1213	PWY-7118	chitin degradation to ethanol
Patl_1213	PWY-7294	xylose degradation IV
Patl_1213	PWY-7295	L-arabinose degradation IV
Patl_1215	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Patl_1216	PWY-5491	diethylphosphate degradation
Patl_1227	PWY-6700	queuosine biosynthesis
Patl_1228	PWY-6700	queuosine biosynthesis
Patl_1232	PWY-2301	<i>myo</i>-inositol biosynthesis
Patl_1232	PWY-4702	phytate degradation I
Patl_1232	PWY-6363	D-<i>myo</i>-inositol (1,4,5)-trisphosphate degradation
Patl_1236	PWY-6936	seleno-amino acid biosynthesis
Patl_1236	PWY-7274	D-cycloserine biosynthesis
Patl_1238	PWY-6823	molybdenum cofactor biosynthesis
Patl_1238	PWY-6891	thiazole biosynthesis II (Bacillus)
Patl_1238	PWY-6892	thiazole biosynthesis I (E. coli)
Patl_1238	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
Patl_1255	PWY-7560	methylerythritol phosphate pathway II
Patl_1260	PWY-5971	palmitate biosynthesis II (bacteria and plants)
Patl_1260	PWY-5973	<i>cis</i>-vaccenate biosynthesis
Patl_1260	PWY-5989	stearate biosynthesis II (bacteria and plants)
Patl_1260	PWY-5994	palmitate biosynthesis I (animals and fungi)
Patl_1260	PWY-6113	superpathway of mycolate biosynthesis
Patl_1260	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
Patl_1260	PWY-6519	8-amino-7-oxononanoate biosynthesis I
Patl_1260	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Patl_1260	PWYG-321	mycolate biosynthesis
Patl_1265	PWY-4381	fatty acid biosynthesis initiation I
Patl_1265	PWY-5743	3-hydroxypropanoate cycle
Patl_1265	PWY-5744	glyoxylate assimilation
Patl_1265	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Patl_1265	PWY-6679	jadomycin biosynthesis
Patl_1265	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Patl_1271	PWY-4381	fatty acid biosynthesis initiation I
Patl_1271	PWY-5743	3-hydroxypropanoate cycle
Patl_1271	PWY-5744	glyoxylate assimilation
Patl_1271	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Patl_1271	PWY-6679	jadomycin biosynthesis
Patl_1271	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Patl_1286	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
Patl_1291	PWY-3781	aerobic respiration I (cytochrome c)
Patl_1291	PWY-4521	arsenite oxidation I (respiratory)
Patl_1291	PWY-6692	Fe(II) oxidation
Patl_1291	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Patl_1291	PWY-7544	pyruvate to cytochrome <i>bo</i> oxidase electron transfer
Patl_1299	PWY-1622	formaldehyde assimilation I (serine pathway)
Patl_1299	PWY-181	photorespiration
Patl_1299	PWY-2161	folate polyglutamylation
Patl_1299	PWY-2201	folate transformations I
Patl_1299	PWY-3661	glycine betaine degradation I
Patl_1299	PWY-3661-1	glycine betaine degradation II (mammalian)
Patl_1299	PWY-3841	folate transformations II
Patl_1299	PWY-5497	purine nucleobases degradation II (anaerobic)
Patl_1312	PWY-6167	flavin biosynthesis II (archaea)
Patl_1312	PWY-6168	flavin biosynthesis III (fungi)
Patl_1312	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Patl_1313	PWY-6167	flavin biosynthesis II (archaea)
Patl_1313	PWY-6168	flavin biosynthesis III (fungi)
Patl_1313	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
Patl_1314	PWY-6167	flavin biosynthesis II (archaea)
Patl_1314	PWY-6168	flavin biosynthesis III (fungi)
Patl_1316	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
Patl_1316	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
Patl_1316	PWY-6896	thiamin salvage I
Patl_1316	PWY-6897	thiamin salvage II
Patl_1317	PWY-5269	cardiolipin biosynthesis II
Patl_1317	PWY-5668	cardiolipin biosynthesis I
Patl_1319	PWY-6891	thiazole biosynthesis II (Bacillus)
Patl_1319	PWY-6892	thiazole biosynthesis I (E. coli)
Patl_1319	PWY-7560	methylerythritol phosphate pathway II
Patl_1340	PWY-5669	phosphatidylethanolamine biosynthesis I
Patl_1362	PWY-6654	phosphopantothenate biosynthesis III
Patl_1366	PWY-6840	homoglutathione biosynthesis
Patl_1366	PWY-7255	ergothioneine biosynthesis I (bacteria)
Patl_1375	PWY-842	starch degradation I
Patl_1395	PWY-6854	ethylene biosynthesis III (microbes)
Patl_1402	PWY-5386	methylglyoxal degradation I
Patl_1419	PWY-5747	2-methylcitrate cycle II
Patl_1438	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
Patl_1438	PWY-3162	L-tryptophan degradation V (side chain pathway)
Patl_1438	PWY-5057	L-valine degradation II
Patl_1438	PWY-5076	L-leucine degradation III
Patl_1438	PWY-5078	L-isoleucine degradation II
Patl_1438	PWY-5079	L-phenylalanine degradation III
Patl_1438	PWY-5082	L-methionine degradation III
Patl_1438	PWY-5480	pyruvate fermentation to ethanol I
Patl_1438	PWY-5486	pyruvate fermentation to ethanol II
Patl_1438	PWY-5751	phenylethanol biosynthesis
Patl_1438	PWY-6028	acetoin degradation
Patl_1438	PWY-6313	serotonin degradation
Patl_1438	PWY-6333	acetaldehyde biosynthesis I
Patl_1438	PWY-6342	noradrenaline and adrenaline degradation
Patl_1438	PWY-6587	pyruvate fermentation to ethanol III
Patl_1438	PWY-6802	salidroside biosynthesis
Patl_1438	PWY-6871	3-methylbutanol biosynthesis
Patl_1438	PWY-7013	L-1,2-propanediol degradation
Patl_1438	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Patl_1438	PWY-7118	chitin degradation to ethanol
Patl_1438	PWY-7396	butanol and isobutanol biosynthesis (engineered)
Patl_1438	PWY-7557	dehydrodiconiferyl alcohol degradation
Patl_1439	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
Patl_1449	PWY-5674	nitrate reduction IV (dissimilatory)
Patl_1454	PWY-7545	pyruvate to cytochrome <i>bd</i> terminal oxidase electron transfer
Patl_1479	PWY-6871	3-methylbutanol biosynthesis
Patl_1513	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
Patl_1541	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Patl_1553	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
Patl_1553	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
Patl_1553	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
Patl_1554	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
Patl_1554	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
Patl_1556	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
Patl_1556	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
Patl_1563	PWY-5381	pyridine nucleotide cycling (plants)
Patl_1563	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
Patl_1572	PWY-6614	tetrahydrofolate biosynthesis
Patl_1573	PWY-6749	CMP-legionaminate biosynthesis I
Patl_1574	PWY-1042	glycolysis IV (plant cytosol)
Patl_1574	PWY-5484	glycolysis II (from fructose 6-phosphate)
Patl_1574	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Patl_1574	PWY-7003	glycerol degradation to butanol
Patl_1579	PWY-6829	tRNA methylation (yeast)
Patl_1579	PWY-7285	methylwyosine biosynthesis
Patl_1579	PWY-7286	7-(3-amino-3-carboxypropyl)-wyosine biosynthesis
Patl_1587	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
Patl_1587	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
Patl_1587	PWY-6164	3-dehydroquinate biosynthesis I
Patl_1588	PWY-3461	L-tyrosine biosynthesis II
Patl_1588	PWY-3462	L-phenylalanine biosynthesis II
Patl_1588	PWY-6120	L-tyrosine biosynthesis III
Patl_1588	PWY-6627	salinosporamide A biosynthesis
Patl_1588	PWY-7303	3-dimethylallyl-4-hydroxybenzoate biosynthesis
Patl_1590	PWY-3461	L-tyrosine biosynthesis II
Patl_1590	PWY-3462	L-phenylalanine biosynthesis II
Patl_1590	PWY-6120	L-tyrosine biosynthesis III
Patl_1590	PWY-6627	salinosporamide A biosynthesis
Patl_1590	PWY-7432	L-phenylalanine biosynthesis III (cytosolic, plants)
Patl_1605	PWY-4381	fatty acid biosynthesis initiation I
Patl_1605	PWY-5743	3-hydroxypropanoate cycle
Patl_1605	PWY-5744	glyoxylate assimilation
Patl_1605	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Patl_1605	PWY-6679	jadomycin biosynthesis
Patl_1605	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Patl_1606	PWY-2161	folate polyglutamylation
Patl_1609	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Patl_1609	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
Patl_1609	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
Patl_1609	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
Patl_1627	PWY-5958	acridone alkaloid biosynthesis
Patl_1627	PWY-6543	4-aminobenzoate biosynthesis
Patl_1627	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
Patl_1627	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
Patl_1627	PWY-6722	candicidin biosynthesis
Patl_1628	PWY-5392	reductive TCA cycle II
Patl_1628	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
Patl_1628	PWY-5690	TCA cycle II (plants and fungi)
Patl_1628	PWY-5913	TCA cycle VI (obligate autotrophs)
Patl_1628	PWY-6728	methylaspartate cycle
Patl_1628	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Patl_1628	PWY-7254	TCA cycle VII (acetate-producers)
Patl_1628	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Patl_1633	PWY-2723	trehalose degradation V
Patl_1633	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
Patl_1633	PWY-5661	GDP-glucose biosynthesis
Patl_1633	PWY-5940	streptomycin biosynthesis
Patl_1633	PWY-621	sucrose degradation III (sucrose invertase)
Patl_1633	PWY-622	starch biosynthesis
Patl_1633	PWY-6731	starch degradation III
Patl_1633	PWY-6737	starch degradation V
Patl_1633	PWY-6981	chitin biosynthesis
Patl_1633	PWY-7238	sucrose biosynthesis II
Patl_1633	PWY-7343	UDP-glucose biosynthesis
Patl_1634	PWY-1042	glycolysis IV (plant cytosol)
Patl_1634	PWY-5484	glycolysis II (from fructose 6-phosphate)
Patl_1634	PWY-6901	superpathway of glucose and xylose degradation
Patl_1634	PWY-7003	glycerol degradation to butanol
Patl_1635	PWY-5941	glycogen degradation II (eukaryotic)
Patl_1635	PWY-6724	starch degradation II
Patl_1635	PWY-6737	starch degradation V
Patl_1635	PWY-7238	sucrose biosynthesis II
Patl_1636	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
Patl_1636	PWY-622	starch biosynthesis
Patl_1640	PWY-1042	glycolysis IV (plant cytosol)
Patl_1640	PWY-5484	glycolysis II (from fructose 6-phosphate)
Patl_1640	PWY-6901	superpathway of glucose and xylose degradation
Patl_1640	PWY-7003	glycerol degradation to butanol
Patl_1648	PWY-5278	sulfite oxidation III
Patl_1648	PWY-5340	sulfate activation for sulfonation
Patl_1648	PWY-6683	sulfate reduction III (assimilatory)
Patl_1648	PWY-6932	selenate reduction
Patl_1650	PWY-5340	sulfate activation for sulfonation
Patl_1651	PWY-5278	sulfite oxidation III
Patl_1651	PWY-5340	sulfate activation for sulfonation
Patl_1651	PWY-6683	sulfate reduction III (assimilatory)
Patl_1651	PWY-6932	selenate reduction
Patl_1663	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
Patl_1663	PWY-6435	4-hydroxybenzoate biosynthesis V
Patl_1663	PWY-6863	pyruvate fermentation to hexanol
Patl_1663	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
Patl_1663	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
Patl_1663	PWY-6948	sitosterol degradation to androstenedione
Patl_1663	PWY-7094	fatty acid salvage
Patl_1663	PWY-7288	fatty acid &beta;-oxidation (peroxisome, yeast)
Patl_1663	PWY-7337	10-<i>cis</i>-heptadecenoyl-CoA degradation (yeast)
Patl_1663	PWY-7338	10-<i>trans</i>-heptadecenoyl-CoA degradation (reductase-dependent, yeast)
Patl_1663	PWY-7339	10-<i>trans</i>-heptadecenoyl-CoA degradation (MFE-dependent, yeast)
Patl_1663	PWY-7340	9-<i>cis</i>, 11-<i>trans</i>-octadecadienoyl-CoA degradation (isomerase-dependent, yeast)
Patl_1663	PWY-735	jasmonic acid biosynthesis
Patl_1664	PWY-1361	benzoyl-CoA degradation I (aerobic)
Patl_1664	PWY-5109	2-methylbutanoate biosynthesis
Patl_1664	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
Patl_1664	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
Patl_1664	PWY-5177	glutaryl-CoA degradation
Patl_1664	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Patl_1664	PWY-6435	4-hydroxybenzoate biosynthesis V
Patl_1664	PWY-6583	pyruvate fermentation to butanol I
Patl_1664	PWY-6863	pyruvate fermentation to hexanol
Patl_1664	PWY-6883	pyruvate fermentation to butanol II
Patl_1664	PWY-6944	androstenedione degradation
Patl_1664	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
Patl_1664	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
Patl_1664	PWY-7007	methyl ketone biosynthesis
Patl_1664	PWY-7046	4-coumarate degradation (anaerobic)
Patl_1664	PWY-7094	fatty acid salvage
Patl_1664	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
Patl_1664	PWY-735	jasmonic acid biosynthesis
Patl_1664	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
Patl_1692	PWY-7158	L-phenylalanine degradation V
Patl_1707	PWY-6164	3-dehydroquinate biosynthesis I
Patl_1715	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
Patl_1715	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
Patl_1715	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
Patl_1716	PWY-6902	chitin degradation II
Patl_1726	PWY-6160	3-dehydroquinate biosynthesis II (archaea)
Patl_1744	PWY-5484	glycolysis II (from fructose 6-phosphate)
Patl_1746	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Patl_1746	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Patl_1762	PWY-6823	molybdenum cofactor biosynthesis
Patl_1762	PWY-6891	thiazole biosynthesis II (Bacillus)
Patl_1762	PWY-6892	thiazole biosynthesis I (E. coli)
Patl_1762	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
Patl_1772	PWY-6654	phosphopantothenate biosynthesis III
Patl_1783	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
Patl_1783	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
Patl_1792	PWY-5659	GDP-mannose biosynthesis
Patl_1792	PWY-6073	alginate biosynthesis I (algal)
Patl_1792	PWY-6082	alginate biosynthesis II (bacterial)
Patl_1792	PWY-882	L-ascorbate biosynthesis I (L-galactose pathway)
Patl_1793	PWY-6749	CMP-legionaminate biosynthesis I
Patl_1797	PWY-3781	aerobic respiration I (cytochrome c)
Patl_1797	PWY-4302	aerobic respiration III (alternative oxidase pathway)
Patl_1797	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
Patl_1797	PWY-5690	TCA cycle II (plants and fungi)
Patl_1797	PWY-6728	methylaspartate cycle
Patl_1797	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Patl_1797	PWY-7254	TCA cycle VII (acetate-producers)
Patl_1797	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Patl_1798	PWY-3781	aerobic respiration I (cytochrome c)
Patl_1798	PWY-4302	aerobic respiration III (alternative oxidase pathway)
Patl_1798	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
Patl_1798	PWY-5690	TCA cycle II (plants and fungi)
Patl_1798	PWY-6728	methylaspartate cycle
Patl_1798	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Patl_1798	PWY-7254	TCA cycle VII (acetate-producers)
Patl_1798	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Patl_1799	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
Patl_1800	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
Patl_1801	PWY-5392	reductive TCA cycle II
Patl_1801	PWY-5537	pyruvate fermentation to acetate V
Patl_1801	PWY-5538	pyruvate fermentation to acetate VI
Patl_1801	PWY-5690	TCA cycle II (plants and fungi)
Patl_1801	PWY-5913	TCA cycle VI (obligate autotrophs)
Patl_1801	PWY-6728	methylaspartate cycle
Patl_1801	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Patl_1801	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Patl_1802	PWY-5392	reductive TCA cycle II
Patl_1802	PWY-5537	pyruvate fermentation to acetate V
Patl_1802	PWY-5538	pyruvate fermentation to acetate VI
Patl_1802	PWY-5690	TCA cycle II (plants and fungi)
Patl_1802	PWY-5913	TCA cycle VI (obligate autotrophs)
Patl_1802	PWY-6728	methylaspartate cycle
Patl_1802	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Patl_1802	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Patl_1804	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Patl_1804	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Patl_1828	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
Patl_1829	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
Patl_1829	PWY-3162	L-tryptophan degradation V (side chain pathway)
Patl_1829	PWY-5057	L-valine degradation II
Patl_1829	PWY-5076	L-leucine degradation III
Patl_1829	PWY-5078	L-isoleucine degradation II
Patl_1829	PWY-5079	L-phenylalanine degradation III
Patl_1829	PWY-5082	L-methionine degradation III
Patl_1829	PWY-5480	pyruvate fermentation to ethanol I
Patl_1829	PWY-5486	pyruvate fermentation to ethanol II
Patl_1829	PWY-5751	phenylethanol biosynthesis
Patl_1829	PWY-6028	acetoin degradation
Patl_1829	PWY-6313	serotonin degradation
Patl_1829	PWY-6333	acetaldehyde biosynthesis I
Patl_1829	PWY-6342	noradrenaline and adrenaline degradation
Patl_1829	PWY-6587	pyruvate fermentation to ethanol III
Patl_1829	PWY-6802	salidroside biosynthesis
Patl_1829	PWY-6871	3-methylbutanol biosynthesis
Patl_1829	PWY-7013	L-1,2-propanediol degradation
Patl_1829	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Patl_1829	PWY-7118	chitin degradation to ethanol
Patl_1829	PWY-7396	butanol and isobutanol biosynthesis (engineered)
Patl_1829	PWY-7557	dehydrodiconiferyl alcohol degradation
Patl_1882	PWY-6936	seleno-amino acid biosynthesis
Patl_1885	PWY-4041	&gamma;-glutamyl cycle
Patl_1885	PWY-5826	hypoglycin biosynthesis
Patl_1895	PWY-5386	methylglyoxal degradation I
Patl_1899	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
Patl_1916	PWY-1361	benzoyl-CoA degradation I (aerobic)
Patl_1916	PWY-5109	2-methylbutanoate biosynthesis
Patl_1916	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
Patl_1916	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
Patl_1916	PWY-5177	glutaryl-CoA degradation
Patl_1916	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Patl_1916	PWY-6435	4-hydroxybenzoate biosynthesis V
Patl_1916	PWY-6583	pyruvate fermentation to butanol I
Patl_1916	PWY-6863	pyruvate fermentation to hexanol
Patl_1916	PWY-6883	pyruvate fermentation to butanol II
Patl_1916	PWY-6944	androstenedione degradation
Patl_1916	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
Patl_1916	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
Patl_1916	PWY-7007	methyl ketone biosynthesis
Patl_1916	PWY-7046	4-coumarate degradation (anaerobic)
Patl_1916	PWY-7094	fatty acid salvage
Patl_1916	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
Patl_1916	PWY-735	jasmonic acid biosynthesis
Patl_1916	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
Patl_1931	PWY-6890	4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis
Patl_1934	PWY-6891	thiazole biosynthesis II (Bacillus)
Patl_1934	PWY-6892	thiazole biosynthesis I (E. coli)
Patl_1935	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
Patl_1935	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
Patl_1935	PWY-6897	thiamin salvage II
Patl_1935	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
Patl_1935	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
Patl_1935	PWY-7353	4-methyl-5(&beta;-hydroxyethyl)thiazole salvage (yeast)
Patl_1935	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
Patl_1971	PWY-6807	xyloglucan degradation II (exoglucanase)
Patl_1978	PWY-5344	L-homocysteine biosynthesis
Patl_2002	PWY-5022	4-aminobutanoate degradation V
Patl_2002	PWY-6728	methylaspartate cycle
Patl_2002	PWY-7126	ethylene biosynthesis IV
Patl_2003	PWY-5686	UMP biosynthesis
Patl_2009	PWY-5971	palmitate biosynthesis II (bacteria and plants)
Patl_2009	PWY-5973	<i>cis</i>-vaccenate biosynthesis
Patl_2009	PWY-5989	stearate biosynthesis II (bacteria and plants)
Patl_2009	PWY-5994	palmitate biosynthesis I (animals and fungi)
Patl_2009	PWY-6113	superpathway of mycolate biosynthesis
Patl_2009	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
Patl_2009	PWY-6519	8-amino-7-oxononanoate biosynthesis I
Patl_2009	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Patl_2009	PWYG-321	mycolate biosynthesis
Patl_2038	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
Patl_2043	PWY-6832	2-aminoethylphosphonate degradation II
Patl_2052	PWY-6832	2-aminoethylphosphonate degradation II
Patl_2054	PWY-4041	&gamma;-glutamyl cycle
Patl_2054	PWY-5826	hypoglycin biosynthesis
Patl_2055	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
Patl_2056	PWY-5392	reductive TCA cycle II
Patl_2056	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
Patl_2056	PWY-5690	TCA cycle II (plants and fungi)
Patl_2056	PWY-5913	TCA cycle VI (obligate autotrophs)
Patl_2056	PWY-6728	methylaspartate cycle
Patl_2056	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Patl_2056	PWY-7254	TCA cycle VII (acetate-producers)
Patl_2056	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Patl_2072	PWY-3781	aerobic respiration I (cytochrome c)
Patl_2072	PWY-4521	arsenite oxidation I (respiratory)
Patl_2072	PWY-6692	Fe(II) oxidation
Patl_2072	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Patl_2073	PWY-3781	aerobic respiration I (cytochrome c)
Patl_2073	PWY-4521	arsenite oxidation I (respiratory)
Patl_2073	PWY-6692	Fe(II) oxidation
Patl_2073	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Patl_2081	PWY-6803	phosphatidylcholine acyl editing
Patl_2081	PWY-7409	phospholipid remodeling (phosphatidylethanolamine, yeast)
Patl_2081	PWY-7416	phospholipid remodeling (phosphatidylcholine, yeast)
Patl_2081	PWY-7417	phospholipid remodeling (phosphatidate, yeast)
Patl_2084	PWY-622	starch biosynthesis
Patl_2087	PWY-1042	glycolysis IV (plant cytosol)
Patl_2087	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Patl_2087	PWY-5484	glycolysis II (from fructose 6-phosphate)
Patl_2087	PWY-7385	1,3-propanediol biosynthesis (engineered)
Patl_2113	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
Patl_2113	PWY-622	starch biosynthesis
Patl_2117	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
Patl_2117	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Patl_2117	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
Patl_2117	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
Patl_2117	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
Patl_2117	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
Patl_2119	PWY-6543	4-aminobenzoate biosynthesis
Patl_2119	PWY-6722	candicidin biosynthesis
Patl_2122	PWY-5367	petroselinate biosynthesis
Patl_2122	PWY-5971	palmitate biosynthesis II (bacteria and plants)
Patl_2122	PWY-5973	<i>cis</i>-vaccenate biosynthesis
Patl_2122	PWY-5989	stearate biosynthesis II (bacteria and plants)
Patl_2122	PWY-5994	palmitate biosynthesis I (animals and fungi)
Patl_2122	PWY-6113	superpathway of mycolate biosynthesis
Patl_2122	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
Patl_2122	PWY-6519	8-amino-7-oxononanoate biosynthesis I
Patl_2122	PWY-6951	Patl_2122
Patl_2122	PWY-7053	docosahexaenoate biosynthesis I (lower eukaryotes)
Patl_2122	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Patl_2122	PWYG-321	mycolate biosynthesis
Patl_2123	PWY-4381	fatty acid biosynthesis initiation I
Patl_2123	PWY-6799	fatty acid biosynthesis (plant mitochondria)
Patl_2123	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Patl_2124	PWY-4381	fatty acid biosynthesis initiation I
Patl_2131	PWY-3221	dTDP-L-rhamnose biosynthesis II
Patl_2131	PWY-6808	dTDP-D-forosamine biosynthesis
Patl_2131	PWY-6942	dTDP-D-desosamine biosynthesis
Patl_2131	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
Patl_2131	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
Patl_2131	PWY-6974	dTDP-L-olivose biosynthesis
Patl_2131	PWY-6976	dTDP-L-mycarose biosynthesis
Patl_2131	PWY-7104	dTDP-L-megosamine biosynthesis
Patl_2131	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
Patl_2131	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
Patl_2131	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
Patl_2131	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
Patl_2131	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
Patl_2131	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
Patl_2131	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
Patl_2131	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
Patl_2132	PWY-3221	dTDP-L-rhamnose biosynthesis II
Patl_2132	PWY-6808	dTDP-D-forosamine biosynthesis
Patl_2132	PWY-6942	dTDP-D-desosamine biosynthesis
Patl_2132	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
Patl_2132	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
Patl_2132	PWY-6974	dTDP-L-olivose biosynthesis
Patl_2132	PWY-6976	dTDP-L-mycarose biosynthesis
Patl_2132	PWY-7104	dTDP-L-megosamine biosynthesis
Patl_2132	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
Patl_2132	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
Patl_2132	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
Patl_2132	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
Patl_2132	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
Patl_2132	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
Patl_2132	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
Patl_2132	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
Patl_2144	PWY-6807	xyloglucan degradation II (exoglucanase)
Patl_2155	PWY-6823	molybdenum cofactor biosynthesis
Patl_2160	PWY-6823	molybdenum cofactor biosynthesis
Patl_2162	PWY-5656	mannosylglycerate biosynthesis I
Patl_2164	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
Patl_2178	PWY-5663	tetrahydrobiopterin biosynthesis I
Patl_2178	PWY-5664	tetrahydrobiopterin biosynthesis II
Patl_2178	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
Patl_2178	PWY-6703	preQ<sub>0</sub> biosynthesis
Patl_2178	PWY-6983	tetrahydrobiopterin biosynthesis III
Patl_2178	PWY-7442	drosopterin and aurodrosopterin biosynthesis
Patl_2184	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Patl_2197	PWY-5941	glycogen degradation II (eukaryotic)
Patl_2197	PWY-622	starch biosynthesis
Patl_2197	PWY-6731	starch degradation III
Patl_2197	PWY-6737	starch degradation V
Patl_2197	PWY-7238	sucrose biosynthesis II
Patl_2198	PWY-2723	trehalose degradation V
Patl_2198	PWY-3801	sucrose degradation II (sucrose synthase)
Patl_2198	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
Patl_2198	PWY-5661	GDP-glucose biosynthesis
Patl_2198	PWY-5661-1	Patl_2198
Patl_2198	PWY-5940	streptomycin biosynthesis
Patl_2198	PWY-5941	glycogen degradation II (eukaryotic)
Patl_2198	PWY-622	starch biosynthesis
Patl_2198	PWY-6731	starch degradation III
Patl_2198	PWY-6737	starch degradation V
Patl_2198	PWY-6749	CMP-legionaminate biosynthesis I
Patl_2198	PWY-7238	sucrose biosynthesis II
Patl_2198	PWY-7343	UDP-glucose biosynthesis
Patl_2205	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
Patl_2205	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
Patl_2214	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Patl_2214	PWY-5686	UMP biosynthesis
Patl_2214	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Patl_2215	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Patl_2215	PWY-5686	UMP biosynthesis
Patl_2215	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Patl_2216	PWY-2941	L-lysine biosynthesis II
Patl_2216	PWY-2942	L-lysine biosynthesis III
Patl_2216	PWY-5097	L-lysine biosynthesis VI
Patl_2218	PWY-5737	(5<i>R</i>)-carbapenem carboxylate biosynthesis
Patl_2218	PWY-6853	ethylene biosynthesis II (microbes)
Patl_2218	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
Patl_2281	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Patl_2281	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Patl_2282	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
Patl_2282	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
Patl_2297	PWY-6854	ethylene biosynthesis III (microbes)
Patl_2320	PWY-5651	L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
Patl_2320	PWY-6309	L-tryptophan degradation XI (mammalian, via kynurenine)
Patl_2321	PWY-1361	benzoyl-CoA degradation I (aerobic)
Patl_2321	PWY-5109	2-methylbutanoate biosynthesis
Patl_2321	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
Patl_2321	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
Patl_2321	PWY-5177	glutaryl-CoA degradation
Patl_2321	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Patl_2321	PWY-6435	4-hydroxybenzoate biosynthesis V
Patl_2321	PWY-6583	pyruvate fermentation to butanol I
Patl_2321	PWY-6863	pyruvate fermentation to hexanol
Patl_2321	PWY-6883	pyruvate fermentation to butanol II
Patl_2321	PWY-6944	androstenedione degradation
Patl_2321	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
Patl_2321	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
Patl_2321	PWY-7007	methyl ketone biosynthesis
Patl_2321	PWY-7046	4-coumarate degradation (anaerobic)
Patl_2321	PWY-7094	fatty acid salvage
Patl_2321	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
Patl_2321	PWY-735	jasmonic acid biosynthesis
Patl_2321	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
Patl_2377	PWY-5913	TCA cycle VI (obligate autotrophs)
Patl_2377	PWY-6549	L-glutamine biosynthesis III
Patl_2377	PWY-6728	methylaspartate cycle
Patl_2377	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Patl_2377	PWY-7124	ethylene biosynthesis V (engineered)
Patl_2377	PWY-7254	TCA cycle VII (acetate-producers)
Patl_2377	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
Patl_2381	PWY-6123	inosine-5'-phosphate biosynthesis I
Patl_2381	PWY-6124	inosine-5'-phosphate biosynthesis II
Patl_2381	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Patl_2381	PWY-7234	inosine-5'-phosphate biosynthesis III
Patl_2390	PWY-6610	adenine and adenosine salvage IV
Patl_2420	PWY-6610	adenine and adenosine salvage IV
Patl_2424	PWY-5497	purine nucleobases degradation II (anaerobic)
Patl_2424	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
Patl_2424	PWY-6538	caffeine degradation III (bacteria, via demethylation)
Patl_2424	PWY-6596	adenosine nucleotides degradation I
Patl_2424	PWY-6606	guanosine nucleotides degradation II
Patl_2424	PWY-6607	guanosine nucleotides degradation I
Patl_2424	PWY-6608	guanosine nucleotides degradation III
Patl_2424	PWY-6999	theophylline degradation
Patl_2425	PWY-5497	purine nucleobases degradation II (anaerobic)
Patl_2425	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
Patl_2425	PWY-6538	caffeine degradation III (bacteria, via demethylation)
Patl_2425	PWY-6596	adenosine nucleotides degradation I
Patl_2425	PWY-6606	guanosine nucleotides degradation II
Patl_2425	PWY-6607	guanosine nucleotides degradation I
Patl_2425	PWY-6608	guanosine nucleotides degradation III
Patl_2425	PWY-6999	theophylline degradation
Patl_2427	PWY-5691	urate degradation to allantoin I
Patl_2427	PWY-7394	urate degradation to allantoin II
Patl_2428	PWY-5691	urate degradation to allantoin I
Patl_2428	PWY-7394	urate degradation to allantoin II
Patl_2429	PWY-5497	purine nucleobases degradation II (anaerobic)
Patl_2429	PWY-6606	guanosine nucleotides degradation II
Patl_2429	PWY-6608	guanosine nucleotides degradation III
Patl_2429	PWY-7442	drosopterin and aurodrosopterin biosynthesis
Patl_2448	PWY-5269	cardiolipin biosynthesis II
Patl_2448	PWY-5668	cardiolipin biosynthesis I
Patl_2456	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
Patl_2463	PWY-5686	UMP biosynthesis
Patl_2467	PWY-7205	CMP phosphorylation
Patl_2468	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Patl_2471	PWY-5855	ubiquinol-7 biosynthesis (prokaryotic)
Patl_2471	PWY-5856	ubiquinol-9 biosynthesis (prokaryotic)
Patl_2471	PWY-5857	ubiquinol-10 biosynthesis (prokaryotic)
Patl_2471	PWY-5870	ubiquinol-8 biosynthesis (eukaryotic)
Patl_2471	PWY-5871	ubiquinol-9 biosynthesis (eukaryotic)
Patl_2471	PWY-5872	ubiquinol-10 biosynthesis (eukaryotic)
Patl_2471	PWY-5873	ubiquinol-7 biosynthesis (eukaryotic)
Patl_2471	PWY-6708	ubiquinol-8 biosynthesis (prokaryotic)
Patl_2471	PWY-7230	ubiquinol-6 biosynthesis from 4-aminobenzoate (eukaryotic)
Patl_2471	PWY-7233	ubiquinol-6 bypass biosynthesis (eukaryotic)
Patl_2472	PWY-181	photorespiration
Patl_2473	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
Patl_2473	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Patl_2473	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
Patl_2473	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
Patl_2473	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Patl_2473	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Patl_2473	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
Patl_2473	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
Patl_2474	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
Patl_2474	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Patl_2474	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
Patl_2474	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
Patl_2474	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Patl_2474	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Patl_2474	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
Patl_2474	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
Patl_2476	PWY-6123	inosine-5'-phosphate biosynthesis I
Patl_2476	PWY-6124	inosine-5'-phosphate biosynthesis II
Patl_2476	PWY-7234	inosine-5'-phosphate biosynthesis III
Patl_2478	PWY-2941	L-lysine biosynthesis II
Patl_2478	PWY-2942	L-lysine biosynthesis III
Patl_2478	PWY-5097	L-lysine biosynthesis VI
Patl_2484	PWY-4202	arsenate detoxification I (glutaredoxin)
Patl_2484	PWY-4621	arsenate detoxification II (glutaredoxin)
Patl_2485	PWY-6785	hydrogen production VIII
Patl_2489	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Patl_2489	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
Patl_2489	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
Patl_2490	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Patl_2490	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
Patl_2517	PWY-6936	seleno-amino acid biosynthesis
Patl_2523	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
Patl_2531	PWY-5194	siroheme biosynthesis
Patl_2531	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
Patl_2534	PWY-6683	sulfate reduction III (assimilatory)
Patl_2537	PWY-6823	molybdenum cofactor biosynthesis
Patl_2554	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
Patl_2555	PWY-6519	8-amino-7-oxononanoate biosynthesis I
Patl_2557	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
Patl_2564	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Patl_2566	PWY-7560	methylerythritol phosphate pathway II
Patl_2587	PWY-3722	glycine betaine biosynthesis II (Gram-positive bacteria)
Patl_2587	PWY-7494	choline degradation IV
Patl_2590	PWY-5482	pyruvate fermentation to acetate II
Patl_2590	PWY-5485	pyruvate fermentation to acetate IV
Patl_2590	PWY-5497	purine nucleobases degradation II (anaerobic)
Patl_2591	PWY-1281	sulfoacetaldehyde degradation I
Patl_2591	PWY-5482	pyruvate fermentation to acetate II
Patl_2591	PWY-5485	pyruvate fermentation to acetate IV
Patl_2591	PWY-5497	purine nucleobases degradation II (anaerobic)
Patl_2591	PWY-6637	sulfolactate degradation II
Patl_2592	PWY-1042	glycolysis IV (plant cytosol)
Patl_2592	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Patl_2592	PWY-5484	glycolysis II (from fructose 6-phosphate)
Patl_2592	PWY-7385	1,3-propanediol biosynthesis (engineered)
Patl_2593	PWY-1622	formaldehyde assimilation I (serine pathway)
Patl_2593	PWY-5484	glycolysis II (from fructose 6-phosphate)
Patl_2594	PWY-5484	glycolysis II (from fructose 6-phosphate)
Patl_2596	PWY-1042	glycolysis IV (plant cytosol)
Patl_2596	PWY-5484	glycolysis II (from fructose 6-phosphate)
Patl_2596	PWY-6901	superpathway of glucose and xylose degradation
Patl_2596	PWY-7003	glycerol degradation to butanol
Patl_2603	PWY-5674	nitrate reduction IV (dissimilatory)
Patl_2635	PWY-5386	methylglyoxal degradation I
Patl_2642	PWY-6807	xyloglucan degradation II (exoglucanase)
Patl_2643	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
Patl_2643	PWY-6507	4-deoxy-L-<i>threo</i>-hex-4-enopyranuronate degradation
Patl_2643	PWY-7242	D-fructuronate degradation
Patl_2643	PWY-7310	D-glucosaminate degradation
Patl_2657	PWY-6784	cellulose and hemicellulose degradation (cellulolosome)
Patl_2668	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Patl_2675	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Patl_2682	PWY-2723	trehalose degradation V
Patl_2682	PWY-6317	galactose degradation I (Leloir pathway)
Patl_2682	PWY-6737	starch degradation V
Patl_2685	PWY-7165	L-ascorbate biosynthesis VI (engineered pathway)
Patl_2707	PWY-723	alkylnitronates degradation
Patl_2767	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Patl_2767	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Patl_2781	PWY-3722	glycine betaine biosynthesis II (Gram-positive bacteria)
Patl_2781	PWY-7494	choline degradation IV
Patl_2829	PWY-5958	acridone alkaloid biosynthesis
Patl_2829	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
Patl_2829	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
Patl_2830	PWY-5958	acridone alkaloid biosynthesis
Patl_2830	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
Patl_2830	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
Patl_2859	PWY-842	starch degradation I
Patl_2886	PWY-5057	L-valine degradation II
Patl_2886	PWY-5076	L-leucine degradation III
Patl_2886	PWY-5078	L-isoleucine degradation II
Patl_2886	PWY-5101	L-isoleucine biosynthesis II
Patl_2886	PWY-5103	L-isoleucine biosynthesis III
Patl_2886	PWY-5104	L-isoleucine biosynthesis IV
Patl_2886	PWY-5108	L-isoleucine biosynthesis V
Patl_2893	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Patl_2898	PWY-6605	adenine and adenosine salvage II
Patl_2898	PWY-6610	adenine and adenosine salvage IV
Patl_2910	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
Patl_2910	PWY-6148	tetrahydromethanopterin biosynthesis
Patl_2910	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
Patl_2910	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
Patl_2919	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Patl_2921	PWY-5651	L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
Patl_2921	PWY-6309	L-tryptophan degradation XI (mammalian, via kynurenine)
Patl_2926	PWY-4381	fatty acid biosynthesis initiation I
Patl_2926	PWY-5743	3-hydroxypropanoate cycle
Patl_2926	PWY-5744	glyoxylate assimilation
Patl_2926	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Patl_2926	PWY-6679	jadomycin biosynthesis
Patl_2926	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Patl_2932	PWY-622	starch biosynthesis
Patl_2960	PWY-6703	preQ<sub>0</sub> biosynthesis
Patl_2961	PWY-6703	preQ<sub>0</sub> biosynthesis
Patl_2999	PWY-6134	L-tyrosine biosynthesis IV
Patl_2999	PWY-7158	L-phenylalanine degradation V
Patl_3011	PWY-6339	syringate degradation
Patl_3013	PWY-6339	syringate degradation
Patl_3044	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Patl_3062	PWY-5833	CDP-4-dehydro-3,6-dideoxy-D-glucose biosynthesis
Patl_3063	PWY-5833	CDP-4-dehydro-3,6-dideoxy-D-glucose biosynthesis
Patl_3063	PWY-5940	streptomycin biosynthesis
Patl_3069	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
Patl_3069	PWY-7328	superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
Patl_3076	PWY-6143	CMP-pseudaminate biosynthesis
Patl_3078	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
Patl_3078	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
Patl_3078	PWY-6143	CMP-pseudaminate biosynthesis
Patl_3080	PWY-6143	CMP-pseudaminate biosynthesis
Patl_3080	PWY-7330	UDP-<i>N</i>-acetyl-&beta;-L-fucosamine biosynthesis
Patl_3080	PWY-7331	UDP-<i>N</i>-acetyl-&beta;-L-quinovosamine biosynthesis
Patl_3080	PWY-7332	superpathway of UDP-<I>N</i>-acetylglucosamine-derived O-antigen building blocks biosynthesis
Patl_3113	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Patl_3113	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
Patl_3113	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
Patl_3119	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
Patl_3120	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
Patl_3120	PWY-6596	adenosine nucleotides degradation I
Patl_3120	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
Patl_3126	PWY-7560	methylerythritol phosphate pathway II
Patl_3130	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
Patl_3130	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
Patl_3130	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Patl_3130	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
Patl_3130	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
Patl_3130	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
Patl_3130	PWY-7205	CMP phosphorylation
Patl_3130	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
Patl_3130	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Patl_3130	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
Patl_3130	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Patl_3130	PWY-7224	purine deoxyribonucleosides salvage
Patl_3130	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
Patl_3130	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
Patl_3139	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
Patl_3139	PWY-2201	folate transformations I
Patl_3139	PWY-3841	folate transformations II
Patl_3139	PWY-5030	L-histidine degradation III
Patl_3139	PWY-5497	purine nucleobases degradation II (anaerobic)
Patl_3139	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
Patl_3147	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
Patl_3147	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
Patl_3156	PWY-5316	nicotine biosynthesis
Patl_3156	PWY-7342	superpathway of nicotine biosynthesis
Patl_3175	PWY-7560	methylerythritol phosphate pathway II
Patl_3179	PWY-5523	5,6-dimethylbenzimidazole biosynthesis
Patl_3179	PWY-6167	flavin biosynthesis II (archaea)
Patl_3179	PWY-6168	flavin biosynthesis III (fungi)
Patl_3193	PWY-6700	queuosine biosynthesis
Patl_3199	PWY-3801	sucrose degradation II (sucrose synthase)
Patl_3199	PWY-6527	stachyose degradation
Patl_3199	PWY-6981	chitin biosynthesis
Patl_3199	PWY-7238	sucrose biosynthesis II
Patl_3199	PWY-7343	UDP-glucose biosynthesis
Patl_3200	PWY-7346	UDP-&alpha;-D-glucuronate biosynthesis (from UDP-glucose)
Patl_3243	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
Patl_3243	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
Patl_3243	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
Patl_3243	PWY-7290	<i>Escherichia coli</i> serotype O86 <i>O</i>-antigen biosynthesis
Patl_3243	PWY-7530	&beta;-D-galactosaminyl-(1&rarr;3)-<i>N</i>-acetyl-&alpha;-D-galactosamine biosynthesis
Patl_3246	PWY-3821	galactose degradation III
Patl_3246	PWY-6317	galactose degradation I (Leloir pathway)
Patl_3246	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
Patl_3246	PWY-6527	stachyose degradation
Patl_3246	PWY-7328	superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
Patl_3246	PWY-7344	UDP-D-galactose biosynthesis
Patl_3260	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
Patl_3265	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
Patl_3265	PWY-7177	UTP and CTP dephosphorylation II
Patl_3265	PWY-7185	UTP and CTP dephosphorylation I
Patl_3266	PWY-1042	glycolysis IV (plant cytosol)
Patl_3266	PWY-1622	formaldehyde assimilation I (serine pathway)
Patl_3266	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
Patl_3266	PWY-5484	glycolysis II (from fructose 6-phosphate)
Patl_3266	PWY-5723	Rubisco shunt
Patl_3266	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Patl_3266	PWY-6886	1-butanol autotrophic biosynthesis
Patl_3266	PWY-6901	superpathway of glucose and xylose degradation
Patl_3266	PWY-7003	glycerol degradation to butanol
Patl_3266	PWY-7124	ethylene biosynthesis V (engineered)
Patl_3266	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
Patl_3268	PWY-6871	3-methylbutanol biosynthesis
Patl_3269	PWY-7396	butanol and isobutanol biosynthesis (engineered)
Patl_3287	PWY-7206	pyrimidine deoxyribonucleotides dephosphorylation
Patl_3297	PWY-4381	fatty acid biosynthesis initiation I
Patl_3327	PWY-1042	glycolysis IV (plant cytosol)
Patl_3327	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Patl_3327	PWY-5484	glycolysis II (from fructose 6-phosphate)
Patl_3327	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Patl_3327	PWY-7385	1,3-propanediol biosynthesis (engineered)
Patl_3328	PWY-1042	glycolysis IV (plant cytosol)
Patl_3328	PWY-5484	glycolysis II (from fructose 6-phosphate)
Patl_3328	PWY-6886	1-butanol autotrophic biosynthesis
Patl_3328	PWY-6901	superpathway of glucose and xylose degradation
Patl_3328	PWY-7003	glycerol degradation to butanol
Patl_3330	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Patl_3330	PWY-5723	Rubisco shunt
Patl_3330	PWY-6891	thiazole biosynthesis II (Bacillus)
Patl_3330	PWY-6892	thiazole biosynthesis I (E. coli)
Patl_3330	PWY-6901	superpathway of glucose and xylose degradation
Patl_3330	PWY-7560	methylerythritol phosphate pathway II
Patl_3331	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
Patl_3331	PWY-5912	2'-deoxymugineic acid phytosiderophore biosynthesis
Patl_3345	PWY-5316	nicotine biosynthesis
Patl_3345	PWY-5381	pyridine nucleotide cycling (plants)
Patl_3345	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
Patl_3345	PWY-7342	superpathway of nicotine biosynthesis
Patl_3350	PWY-6891	thiazole biosynthesis II (Bacillus)
Patl_3350	PWY-6892	thiazole biosynthesis I (E. coli)
Patl_3350	PWY-7560	methylerythritol phosphate pathway II
Patl_3352	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
Patl_3352	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
Patl_3363	PWY-2941	L-lysine biosynthesis II
Patl_3363	PWY-2942	L-lysine biosynthesis III
Patl_3363	PWY-5097	L-lysine biosynthesis VI
Patl_3363	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Patl_3363	PWY-6559	spermidine biosynthesis II
Patl_3363	PWY-6562	norspermidine biosynthesis
Patl_3363	PWY-7153	grixazone biosynthesis
Patl_3363	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Patl_3386	PWY-1042	glycolysis IV (plant cytosol)
Patl_3386	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Patl_3386	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
Patl_3386	PWY-5484	glycolysis II (from fructose 6-phosphate)
Patl_3386	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
Patl_3386	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
Patl_3386	PWY-7385	1,3-propanediol biosynthesis (engineered)
Patl_3388	PWY-6784	cellulose and hemicellulose degradation (cellulolosome)
Patl_3406	PWY-5344	L-homocysteine biosynthesis
Patl_3406	PWY-7174	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation II
Patl_3425	PWY-2941	L-lysine biosynthesis II
Patl_3425	PWY-2942	L-lysine biosynthesis III
Patl_3425	PWY-5097	L-lysine biosynthesis VI
Patl_3425	PWY-6559	spermidine biosynthesis II
Patl_3425	PWY-6562	norspermidine biosynthesis
Patl_3425	PWY-7153	grixazone biosynthesis
Patl_3426	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
Patl_3428	PWY-5747	2-methylcitrate cycle II
Patl_3459	PWY-4041	&gamma;-glutamyl cycle
Patl_3459	PWY-5826	hypoglycin biosynthesis
Patl_3483	PWY-5669	phosphatidylethanolamine biosynthesis I
Patl_3508	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Patl_3508	PWY-5723	Rubisco shunt
Patl_3510	PWY-6502	oxidized GTP and dGTP detoxification
Patl_3517	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Patl_3517	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Patl_3518	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Patl_3518	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Patl_3519	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
Patl_3519	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
Patl_3519	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
Patl_3519	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
Patl_3521	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Patl_3521	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Patl_3522	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
Patl_3522	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
Patl_3522	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
Patl_3523	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Patl_3523	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Patl_3530	PWY-7130	L-glucose degradation
Patl_3533	PWY-4261	glycerol degradation I
Patl_3534	PWY-2723	trehalose degradation V
Patl_3534	PWY-6317	galactose degradation I (Leloir pathway)
Patl_3534	PWY-6737	starch degradation V
Patl_3562	PWY-5988	wound-induced proteolysis I
Patl_3562	PWY-6018	seed germination protein turnover
Patl_3579	PWY-702	L-methionine biosynthesis II
Patl_3580	PWY-2941	L-lysine biosynthesis II
Patl_3580	PWY-2942	L-lysine biosynthesis III
Patl_3580	PWY-5097	L-lysine biosynthesis VI
Patl_3580	PWY-6559	spermidine biosynthesis II
Patl_3580	PWY-6562	norspermidine biosynthesis
Patl_3580	PWY-7153	grixazone biosynthesis
Patl_3581	PWY-622	starch biosynthesis
Patl_3611	PWY-1042	glycolysis IV (plant cytosol)
Patl_3611	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
Patl_3611	PWY-5484	glycolysis II (from fructose 6-phosphate)
Patl_3611	PWY-5723	Rubisco shunt
Patl_3611	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Patl_3611	PWY-6886	1-butanol autotrophic biosynthesis
Patl_3611	PWY-6901	superpathway of glucose and xylose degradation
Patl_3611	PWY-7003	glycerol degradation to butanol
Patl_3611	PWY-7124	ethylene biosynthesis V (engineered)
Patl_3611	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
Patl_3615	PWY-5667	CDP-diacylglycerol biosynthesis I
Patl_3615	PWY-5981	CDP-diacylglycerol biosynthesis III
Patl_3622	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Patl_3622	PWY-5723	Rubisco shunt
Patl_3623	PWY-3801	sucrose degradation II (sucrose synthase)
Patl_3623	PWY-5054	sorbitol biosynthesis I
Patl_3623	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
Patl_3623	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
Patl_3623	PWY-5659	GDP-mannose biosynthesis
Patl_3623	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Patl_3623	PWY-621	sucrose degradation III (sucrose invertase)
Patl_3623	PWY-622	starch biosynthesis
Patl_3623	PWY-6531	mannitol cycle
Patl_3623	PWY-6981	chitin biosynthesis
Patl_3623	PWY-7238	sucrose biosynthesis II
Patl_3623	PWY-7347	sucrose biosynthesis III
Patl_3623	PWY-7385	1,3-propanediol biosynthesis (engineered)
Patl_3628	PWY-6936	seleno-amino acid biosynthesis
Patl_3644	PWY-5530	sorbitol biosynthesis II
Patl_3644	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Patl_3648	PWY-7242	D-fructuronate degradation
Patl_3651	PWY-6986	alginate degradation
Patl_3682	PWY-4261	glycerol degradation I
Patl_3682	PWY-6118	glycerol-3-phosphate shuttle
Patl_3682	PWY-6952	glycerophosphodiester degradation
Patl_3687	PWY-6527	stachyose degradation
Patl_3688	PWY-7533	gliotoxin biosynthesis
Patl_3695	PWY-6478	GDP-D-<i>glycero</i>-&alpha;-D-<i>manno</i>-heptose biosynthesis
Patl_3701	PWY-3781	aerobic respiration I (cytochrome c)
Patl_3701	PWY-6692	Fe(II) oxidation
Patl_3701	PWY-7082	ammonia oxidation IV (autotrophic ammonia oxidizers)
Patl_3701	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Patl_3708	PWY-6012	acyl carrier protein metabolism I
Patl_3708	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
Patl_3718	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
Patl_3719	PWY-3341	L-proline biosynthesis III
Patl_3719	PWY-4981	L-proline biosynthesis II (from arginine)
Patl_3719	PWY-6344	L-ornithine degradation II (Stickland reaction)
Patl_3725	PWY-4261	glycerol degradation I
Patl_3732	PWY-3561	choline biosynthesis III
Patl_3732	PWY-7039	phosphatidate metabolism, as a signaling molecule
Patl_3735	PWY-3841	folate transformations II
Patl_3735	PWY-6614	tetrahydrofolate biosynthesis
Patl_3762	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
Patl_3804	PWY-6825	phosphatidylcholine biosynthesis V
Patl_3823	PWY-621	sucrose degradation III (sucrose invertase)
Patl_3837	PWY-3841	folate transformations II
Patl_3837	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Patl_3837	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
Patl_3837	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
Patl_3837	PWY-7199	pyrimidine deoxyribonucleosides salvage
Patl_3837	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
Patl_3857	PWY-7560	methylerythritol phosphate pathway II
Patl_3858	PWY-7560	methylerythritol phosphate pathway II
Patl_3860	PWY-5381	pyridine nucleotide cycling (plants)
Patl_3860	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
Patl_3860	PWY-6596	adenosine nucleotides degradation I
Patl_3860	PWY-6606	guanosine nucleotides degradation II
Patl_3860	PWY-6607	guanosine nucleotides degradation I
Patl_3860	PWY-6608	guanosine nucleotides degradation III
Patl_3860	PWY-7185	UTP and CTP dephosphorylation I
Patl_3873	PWY-40	putrescine biosynthesis I
Patl_3873	PWY-43	putrescine biosynthesis II
Patl_3873	PWY-6305	putrescine biosynthesis IV
Patl_3873	PWY-6834	spermidine biosynthesis III
Patl_3879	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
Patl_3881	PWY-6749	CMP-legionaminate biosynthesis I
Patl_3886	PWY-6216	3-chlorobenzoate degradation II (via protocatechuate)
Patl_3886	PWY-6217	3,4-dichlorobenzoate degradation
Patl_3893	PWY-6215	4-chlorobenzoate degradation
Patl_3907	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Patl_3907	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Patl_3909	PWY-5692	allantoin degradation to glyoxylate II
Patl_3909	PWY-5698	allantoin degradation to ureidoglycolate II (ammonia producing)
Patl_3919	PWY-6784	cellulose and hemicellulose degradation (cellulolosome)
Patl_3933	PWY-6654	phosphopantothenate biosynthesis III
Patl_3934	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
Patl_3934	PWY-6148	tetrahydromethanopterin biosynthesis
Patl_3934	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
Patl_3934	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
Patl_3939	PWY-5988	wound-induced proteolysis I
Patl_3939	PWY-6018	seed germination protein turnover
Patl_3955	PWY-2201	folate transformations I
Patl_3955	PWY-3841	folate transformations II
Patl_3961	PWY-6168	flavin biosynthesis III (fungi)
Patl_3961	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
Patl_3964	PWY-43	putrescine biosynthesis II
Patl_3973	PWY-6938	NADH repair
Patl_3977	PWY-2781	<i>cis</i>-zeatin biosynthesis
Patl_3997	PWY-3961	phosphopantothenate biosynthesis II
Patl_3998	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
Patl_3998	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
Patl_3999	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Patl_3999	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Patl_4013	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
Patl_4013	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Patl_4013	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
Patl_4013	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
Patl_4016	PWY-5913	TCA cycle VI (obligate autotrophs)
Patl_4016	PWY-6318	L-phenylalanine degradation IV (mammalian, via side chain)
Patl_4016	PWY-6638	sulfolactate degradation III
Patl_4016	PWY-6642	(<i>R</i>)-cysteate degradation
Patl_4016	PWY-6643	coenzyme M biosynthesis II
Patl_4016	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
Patl_4016	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
Patl_4016	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
Patl_4025	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
Patl_4038	PWY-6683	sulfate reduction III (assimilatory)
Patl_4039	PWY-6683	sulfate reduction III (assimilatory)
Patl_4053	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
Patl_4053	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
Patl_4065	PWY-6807	xyloglucan degradation II (exoglucanase)
Patl_4073	PWY-2941	L-lysine biosynthesis II
Patl_4073	PWY-2942	L-lysine biosynthesis III
Patl_4073	PWY-5097	L-lysine biosynthesis VI
Patl_4074	PWY-2941	L-lysine biosynthesis II
Patl_4074	PWY-5097	L-lysine biosynthesis VI
Patl_4078	PWY-6936	seleno-amino acid biosynthesis
Patl_4078	PWY-7274	D-cycloserine biosynthesis
Patl_4088	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
Patl_4088	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
Patl_4088	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
Patl_4174	PWY-6906	chitin derivatives degradation
Patl_4174	PWY-7077	<i>N</i>-acetyl-D-galactosamine degradation
Patl_4174	PWY-7395	D-galactosamine and <i>N</i>-acetyl-D-galactosamine degradation
Patl_4201	PWY-381	nitrate reduction II (assimilatory)
Patl_4201	PWY-5675	nitrate reduction V (assimilatory)
Patl_4201	PWY-6549	L-glutamine biosynthesis III
Patl_4201	PWY-6963	ammonia assimilation cycle I
Patl_4201	PWY-6964	ammonia assimilation cycle II
Patl_4206	PWY-4081	glutathione redox reactions I
Patl_4209	PWY-5839	menaquinol-7 biosynthesis
Patl_4209	PWY-5844	menaquinol-9 biosynthesis
Patl_4209	PWY-5849	menaquinol-6 biosynthesis
Patl_4209	PWY-5890	menaquinol-10 biosynthesis
Patl_4209	PWY-5891	menaquinol-11 biosynthesis
Patl_4209	PWY-5892	menaquinol-12 biosynthesis
Patl_4209	PWY-5895	menaquinol-13 biosynthesis
Patl_4219	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Patl_4219	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
Patl_4223	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Patl_4224	PWY-6123	inosine-5'-phosphate biosynthesis I
Patl_4224	PWY-7234	inosine-5'-phosphate biosynthesis III
Patl_4230	PWY-6519	8-amino-7-oxononanoate biosynthesis I
Patl_4245	PWY-3781	aerobic respiration I (cytochrome c)
Patl_4245	PWY-4521	arsenite oxidation I (respiratory)
Patl_4245	PWY-6692	Fe(II) oxidation
Patl_4245	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Patl_4248	PWY-5667	CDP-diacylglycerol biosynthesis I
Patl_4248	PWY-7411	superpathway of phosphatidate biosynthesis (yeast)
Patl_4250	PWY-5101	L-isoleucine biosynthesis II
Patl_4250	PWY-5103	L-isoleucine biosynthesis III
Patl_4250	PWY-5104	L-isoleucine biosynthesis IV
Patl_4250	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Patl_4255	PWY-5101	L-isoleucine biosynthesis II
Patl_4255	PWY-5103	L-isoleucine biosynthesis III
Patl_4255	PWY-5104	L-isoleucine biosynthesis IV
Patl_4255	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Patl_4260	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
Patl_4260	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Patl_4260	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
Patl_4260	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
Patl_4281	PWY-5686	UMP biosynthesis
Patl_4295	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Patl_4297	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis