YSA_00006	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_00006	SSF90002	Hypothetical protein YjiA, C-terminal domain
YSA_00012	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_00014	SSF56752	D-aminoacid aminotransferase-like PLP-dependent enzymes
YSA_00020	SSF46785	"Winged helix" DNA-binding domain
YSA_00020	SSF53850	Periplasmic binding protein-like II
YSA_00023	SSF53067	Actin-like ATPase domain
YSA_00026	SSF46689	Homeodomain-like
YSA_00038	SSF103481	Multidrug resistance efflux transporter EmrE
YSA_00040	SSF55298	YjgF-like
YSA_00047	SSF46689	Homeodomain-like
YSA_00047	SSF52317	Class I glutamine amidotransferase-like
YSA_00048	SSF46689	Homeodomain-like
YSA_00048	SSF48498	Tetracyclin repressor-like, C-terminal domain
YSA_00050	SSF63829	Calcium-dependent phosphotriesterase
YSA_00051	SSF53850	Periplasmic binding protein-like II
YSA_00054	SSF51679	Bacterial luciferase-like
YSA_00055	SSF51182	RmlC-like cupins
YSA_00057	SSF55961	Bet v1-like
YSA_00061	SSF46785	"Winged helix" DNA-binding domain
YSA_00061	SSF54909	Dimeric alpha+beta barrel
YSA_00067	SSF51735	NAD(P)-binding Rossmann-fold domains
YSA_00069	SSF46785	"Winged helix" DNA-binding domain
YSA_00069	SSF53850	Periplasmic binding protein-like II
YSA_00073	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
YSA_00076	SSF51905	FAD/NAD(P)-binding domain
YSA_00076	SSF54373	FAD-linked reductases, C-terminal domain
YSA_00078	SSF46689	Homeodomain-like
YSA_00078	SSF51182	RmlC-like cupins
YSA_00079	SSF46955	Putative DNA-binding domain
YSA_00082	SSF51569	Aldolase
YSA_00088	SSF141447	PA2021-like
YSA_00091	SSF54862	4Fe-4S ferredoxins
YSA_00094	SSF46785	"Winged helix" DNA-binding domain
YSA_00094	SSF53383	PLP-dependent transferases
YSA_00097	SSF47384	Homodimeric domain of signal transducing histidine kinase
YSA_00097	SSF52172	CheY-like
YSA_00097	SSF55785	PYP-like sensor domain (PAS domain)
YSA_00097	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
YSA_00099	SSF47384	Homodimeric domain of signal transducing histidine kinase
YSA_00099	SSF52172	CheY-like
YSA_00099	SSF55785	PYP-like sensor domain (PAS domain)
YSA_00099	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
YSA_00100	SSF51735	NAD(P)-binding Rossmann-fold domains
YSA_00104	SSF103473	MFS general substrate transporter
YSA_00108	SSF103473	MFS general substrate transporter
YSA_00109	SSF111369	HlyD-like secretion proteins
YSA_00112	SSF46785	"Winged helix" DNA-binding domain
YSA_00113	SSF46894	C-terminal effector domain of the bipartite response regulators
YSA_00113	SSF52172	CheY-like
YSA_00115	SSF47384	Homodimeric domain of signal transducing histidine kinase
YSA_00115	SSF55785	PYP-like sensor domain (PAS domain)
YSA_00115	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
YSA_00117	SSF56801	Acetyl-CoA synthetase-like
YSA_00120	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
YSA_00120	SSF56645	Acyl-CoA dehydrogenase NM domain-like
YSA_00129	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
YSA_00131	SSF53850	Periplasmic binding protein-like II
YSA_00133	SSF161098	MetI-like
YSA_00135	SSF46785	"Winged helix" DNA-binding domain
YSA_00135	SSF53850	Periplasmic binding protein-like II
YSA_00141	SSF55797	PR-1-like
YSA_00142	SSF46689	Homeodomain-like
YSA_00142	SSF52317	Class I glutamine amidotransferase-like
YSA_00146	SSF103473	MFS general substrate transporter
YSA_00148	SSF46785	"Winged helix" DNA-binding domain
YSA_00148	SSF53850	Periplasmic binding protein-like II
YSA_00150	SSF51182	RmlC-like cupins
YSA_00152	SSF50998	Quinoprotein alcohol dehydrogenase-like
YSA_00157	SSF53187	Zn-dependent exopeptidases
YSA_00157	SSF55031	Bacterial exopeptidase dimerisation domain
YSA_00158	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
YSA_00161	SSF51905	FAD/NAD(P)-binding domain
YSA_00162	SSF55298	YjgF-like
YSA_00165	SSF51735	NAD(P)-binding Rossmann-fold domains
YSA_00167	SSF51556	Metallo-dependent hydrolases
YSA_00171	SSF46785	"Winged helix" DNA-binding domain
YSA_00171	SSF53850	Periplasmic binding protein-like II
YSA_00173	SSF56935	Porins
YSA_00177	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
YSA_00177	SSF88946	Sigma2 domain of RNA polymerase sigma factors
YSA_00178	SSF53738	Phosphoglucomutase, first 3 domains
YSA_00178	SSF55957	Phosphoglucomutase, C-terminal domain
YSA_00185	SSF141868	EAL domain-like
YSA_00185	SSF55073	Nucleotide cyclase
YSA_00187	SSF56954	Outer membrane efflux proteins (OEP)
YSA_00189	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
YSA_00189	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
YSA_00189	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
YSA_00193	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
YSA_00193	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
YSA_00193	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
YSA_00197	SSF111369	HlyD-like secretion proteins
YSA_00198	SSF52833	Thioredoxin-like
YSA_00202	SSF103473	MFS general substrate transporter
YSA_00207	SSF53383	PLP-dependent transferases
YSA_00209	SSF89733	L-sulfolactate dehydrogenase-like
YSA_00210	SSF46689	Homeodomain-like
YSA_00210	SSF53697	SIS domain
YSA_00212	SSF53850	Periplasmic binding protein-like II
YSA_00213	SSF161098	MetI-like
YSA_00214	SSF161098	MetI-like
YSA_00216	SSF51905	FAD/NAD(P)-binding domain
YSA_00216	SSF54373	FAD-linked reductases, C-terminal domain
YSA_00218	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_00221	SSF52821	Rhodanese/Cell cycle control phosphatase
YSA_00223	SSF46894	C-terminal effector domain of the bipartite response regulators
YSA_00223	SSF52172	CheY-like
YSA_00225	SSF47384	Homodimeric domain of signal transducing histidine kinase
YSA_00225	SSF52172	CheY-like
YSA_00225	SSF55785	PYP-like sensor domain (PAS domain)
YSA_00225	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
YSA_00229	SSF56935	Porins
YSA_00230	SSF56784	HAD-like
YSA_00232	SSF140931	Fic-like
YSA_00235	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_00236	SSF161098	MetI-like
YSA_00239	SSF161098	MetI-like
YSA_00242	SSF53850	Periplasmic binding protein-like II
YSA_00249	SSF161084	MAPEG domain-like
YSA_00250	SSF47413	lambda repressor-like DNA-binding domains
YSA_00251	SSF56529	FAH
YSA_00252	SSF103473	MFS general substrate transporter
YSA_00253	SSF56796	Dehydroquinate synthase-like
YSA_00256	SSF46785	"Winged helix" DNA-binding domain
YSA_00256	SSF53850	Periplasmic binding protein-like II
YSA_00259	SSF46785	"Winged helix" DNA-binding domain
YSA_00259	SSF54909	Dimeric alpha+beta barrel
YSA_00262	SSF52402	Adenine nucleotide alpha hydrolases-like
YSA_00266	SSF46689	Homeodomain-like
YSA_00266	SSF51215	Regulatory protein AraC
YSA_00268	SSF55729	Acyl-CoA N-acyltransferases (Nat)
YSA_00270	SSF103473	MFS general substrate transporter
YSA_00275	SSF56784	HAD-like
YSA_00275	SSF81653	Calcium ATPase, transduction domain A
YSA_00275	SSF81665	Calcium ATPase, transmembrane domain M
YSA_00283	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
YSA_00284	SSF46785	"Winged helix" DNA-binding domain
YSA_00284	SSF53383	PLP-dependent transferases
YSA_00285	SSF52343	Ferredoxin reductase-like, C-terminal NADP-linked domain
YSA_00285	SSF54292	2Fe-2S ferredoxin-like
YSA_00285	SSF55920	Creatinase/aminopeptidase
YSA_00285	SSF63380	Riboflavin synthase domain-like
YSA_00286	SSF55729	Acyl-CoA N-acyltransferases (Nat)
YSA_00291	SSF52172	CheY-like
YSA_00292	SSF53822	Periplasmic binding protein-like I
YSA_00294	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_00295	SSF56317	Carbon-nitrogen hydrolase
YSA_00297	SSF51569	Aldolase
YSA_00302	SSF48452	TPR-like
YSA_00304	SSF48208	Six-hairpin glycosidases
YSA_00308	SSF141371	PilZ domain-like
YSA_00308	SSF53448	Nucleotide-diphospho-sugar transferases
YSA_00309	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_00320	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_00320	SSF90123	ABC transporter transmembrane region
YSA_00322	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_00332	SSF160719	gpW/gp25-like
YSA_00338	SSF49879	SMAD/FHA domain
YSA_00341	SSF47954	Cyclin-like
YSA_00347	SSF141452	Hcp1-like
YSA_00348	SSF69255	gp5 N-terminal domain-like
YSA_00348	SSF69279	Phage tail proteins
YSA_00348	SSF69349	Phage fibre proteins
YSA_00361	SSF46785	"Winged helix" DNA-binding domain
YSA_00361	SSF55781	GAF domain-like
YSA_00364	SSF51735	NAD(P)-binding Rossmann-fold domains
YSA_00364	SSF53223	Aminoacid dehydrogenase-like, N-terminal domain
YSA_00366	SSF51905	FAD/NAD(P)-binding domain
YSA_00366	SSF56425	Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain
YSA_00367	SSF54909	Dimeric alpha+beta barrel
YSA_00368	SSF51905	FAD/NAD(P)-binding domain
YSA_00368	SSF56425	Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain
YSA_00370	SSF103473	MFS general substrate transporter
YSA_00374	SSF51658	Xylose isomerase-like
YSA_00375	SSF51735	NAD(P)-binding Rossmann-fold domains
YSA_00375	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
YSA_00378	SSF46785	"Winged helix" DNA-binding domain
YSA_00378	SSF55781	GAF domain-like
YSA_00381	SSF51905	FAD/NAD(P)-binding domain
YSA_00381	SSF56425	Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain
YSA_00385	SSF103190	Sensory domain-like
YSA_00385	SSF109604	HD-domain/PDEase-like
YSA_00385	SSF55781	GAF domain-like
YSA_00386	SSF53720	ALDH-like
YSA_00387	SSF53383	PLP-dependent transferases
YSA_00389	SSF46894	C-terminal effector domain of the bipartite response regulators
YSA_00394	SSF53720	ALDH-like
YSA_00396	SSF51338	Composite domain of metallo-dependent hydrolases
YSA_00396	SSF51556	Metallo-dependent hydrolases
YSA_00399	SSF55729	Acyl-CoA N-acyltransferases (Nat)
YSA_00401	SSF48613	Heme oxygenase-like
YSA_00409	SSF53649	Alkaline phosphatase-like
YSA_00410	SSF159594	XCC0632-like
YSA_00419	SSF46785	"Winged helix" DNA-binding domain
YSA_00419	SSF53850	Periplasmic binding protein-like II
YSA_00421	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
YSA_00424	SSF103473	MFS general substrate transporter
YSA_00426	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
YSA_00427	SSF53474	alpha/beta-Hydrolases
YSA_00431	SSF52058	L domain-like
YSA_00432	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_00434	SSF51182	RmlC-like cupins
YSA_00437	SSF47336	ACP-like
YSA_00437	SSF56801	Acetyl-CoA synthetase-like
YSA_00438	SSF52499	Isochorismatase-like hydrolases
YSA_00441	SSF48113	Heme-dependent peroxidases
YSA_00441	SSF51120	beta-Roll
YSA_00445	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_00445	SSF90123	ABC transporter transmembrane region
YSA_00446	SSF51230	Single hybrid motif
YSA_00448	SSF56954	Outer membrane efflux proteins (OEP)
YSA_00451	SSF55073	Nucleotide cyclase
YSA_00451	SSF55785	PYP-like sensor domain (PAS domain)
YSA_00455	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
YSA_00456	SSF51658	Xylose isomerase-like
YSA_00456	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
YSA_00460	SSF103473	MFS general substrate transporter
YSA_00462	SSF53383	PLP-dependent transferases
YSA_00463	SSF46785	"Winged helix" DNA-binding domain
YSA_00463	SSF53850	Periplasmic binding protein-like II
YSA_00465	SSF75625	YebC-like
YSA_00469	SSF51905	FAD/NAD(P)-binding domain
YSA_00471	SSF103473	MFS general substrate transporter
YSA_00473	SSF46785	"Winged helix" DNA-binding domain
YSA_00473	SSF53850	Periplasmic binding protein-like II
YSA_00477	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
YSA_00483	SSF46785	"Winged helix" DNA-binding domain
YSA_00483	SSF53383	PLP-dependent transferases
YSA_00487	SSF53187	Zn-dependent exopeptidases
YSA_00492	SSF51735	NAD(P)-binding Rossmann-fold domains
YSA_00493	SSF46785	"Winged helix" DNA-binding domain
YSA_00493	SSF53850	Periplasmic binding protein-like II
YSA_00500	SSF47616	GST C-terminal domain-like
YSA_00500	SSF52833	Thioredoxin-like
YSA_00501	SSF103473	MFS general substrate transporter
YSA_00504	SSF46785	"Winged helix" DNA-binding domain
YSA_00504	SSF53850	Periplasmic binding protein-like II
YSA_00505	SSF46689	Homeodomain-like
YSA_00506	SSF51338	Composite domain of metallo-dependent hydrolases
YSA_00506	SSF51556	Metallo-dependent hydrolases
YSA_00508	SSF103473	MFS general substrate transporter
YSA_00509	SSF51735	NAD(P)-binding Rossmann-fold domains
YSA_00509	SSF52283	Formate/glycerate dehydrogenase catalytic domain-like
YSA_00517	SSF53383	PLP-dependent transferases
YSA_00521	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_00522	SSF109604	HD-domain/PDEase-like
YSA_00523	SSF56935	Porins
YSA_00525	SSF56601	beta-lactamase/transpeptidase-like
YSA_00528	SSF103473	MFS general substrate transporter
YSA_00530	SSF48076	LigA subunit of an aromatic-ring-opening dioxygenase LigAB
YSA_00530	SSF53213	LigB-like
YSA_00537	SSF46785	"Winged helix" DNA-binding domain
YSA_00537	SSF53850	Periplasmic binding protein-like II
YSA_00538	SSF102588	LmbE-like
YSA_00539	SSF89562	RraA-like
YSA_00540	SSF54506	Diaminopimelate epimerase-like
YSA_00545	SSF55620	Tetrahydrobiopterin biosynthesis enzymes-like
YSA_00557	SSF51735	NAD(P)-binding Rossmann-fold domains
YSA_00560	SSF55073	Nucleotide cyclase
YSA_00560	SSF55781	GAF domain-like
YSA_00563	SSF109854	DinB/YfiT-like putative metalloenzymes
YSA_00566	SSF55331	Tautomerase/MIF
YSA_00568	SSF51735	NAD(P)-binding Rossmann-fold domains
YSA_00570	SSF46785	"Winged helix" DNA-binding domain
YSA_00570	SSF53850	Periplasmic binding protein-like II
YSA_00574	SSF56349	DNA breaking-rejoining enzymes
YSA_00591	SSF53383	PLP-dependent transferases
YSA_00594	SSF53720	ALDH-like
YSA_00596	SSF46785	"Winged helix" DNA-binding domain
YSA_00596	SSF54909	Dimeric alpha+beta barrel
YSA_00597	SSF53187	Zn-dependent exopeptidases
YSA_00599	SSF53092	Creatinase/prolidase N-terminal domain
YSA_00599	SSF55920	Creatinase/aminopeptidase
YSA_00600	SSF51735	NAD(P)-binding Rossmann-fold domains
YSA_00602	SSF53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes
YSA_00606	SSF46785	"Winged helix" DNA-binding domain
YSA_00606	SSF53383	PLP-dependent transferases
YSA_00609	SSF53850	Periplasmic binding protein-like II
YSA_00613	SSF161098	MetI-like
YSA_00615	SSF161098	MetI-like
YSA_00616	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_00620	SSF56672	DNA/RNA polymerases
YSA_00631	SSF52091	SpoIIaa-like
YSA_00636	SSF54913	GlnB-like
YSA_00637	SSF50324	Inorganic pyrophosphatase
YSA_00643	SSF52788	Phosphotyrosine protein phosphatases I
YSA_00645	SSF46785	"Winged helix" DNA-binding domain
YSA_00647	SSF52788	Phosphotyrosine protein phosphatases I
YSA_00652	SSF52218	Flavoproteins
YSA_00654	SSF52799	(Phosphotyrosine protein) phosphatases II
YSA_00655	SSF51735	NAD(P)-binding Rossmann-fold domains
YSA_00655	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
YSA_00656	SSF103473	MFS general substrate transporter
YSA_00658	SSF51905	FAD/NAD(P)-binding domain
YSA_00671	SSF46689	Homeodomain-like
YSA_00671	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_00671	SSF55785	PYP-like sensor domain (PAS domain)
YSA_00674	SSF56281	Metallo-hydrolase/oxidoreductase
YSA_00677	SSF51905	FAD/NAD(P)-binding domain
YSA_00677	SSF52799	(Phosphotyrosine protein) phosphatases II
YSA_00680	SSF82784	OsmC-like
YSA_00681	SSF46785	"Winged helix" DNA-binding domain
YSA_00689	SSF52821	Rhodanese/Cell cycle control phosphatase
YSA_00692	SSF52821	Rhodanese/Cell cycle control phosphatase
YSA_00697	SSF56281	Metallo-hydrolase/oxidoreductase
YSA_00700	SSF56281	Metallo-hydrolase/oxidoreductase
YSA_00701	SSF52833	Thioredoxin-like
YSA_00708	SSF46785	"Winged helix" DNA-binding domain
YSA_00708	SSF48008	GntR ligand-binding domain-like
YSA_00712	SSF53720	ALDH-like
YSA_00715	SSF52343	Ferredoxin reductase-like, C-terminal NADP-linked domain
YSA_00715	SSF54292	2Fe-2S ferredoxin-like
YSA_00715	SSF63380	Riboflavin synthase domain-like
YSA_00718	SSF103473	MFS general substrate transporter
YSA_00723	SSF53098	Ribonuclease H-like
YSA_00737	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_00739	SSF110849	ParB/Sulfiredoxin
YSA_00747	SSF50249	Nucleic acid-binding proteins
YSA_00750	SSF47413	lambda repressor-like DNA-binding domains
YSA_00753	SSF56712	Prokaryotic type I DNA topoisomerase
YSA_00753	SSF57783	Zinc beta-ribbon
YSA_00761	SSF102712	JAB1/MPN domain
YSA_00768	SSF53955	Lysozyme-like
YSA_00771	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_00800	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_00824	SSF46785	"Winged helix" DNA-binding domain
YSA_00829	SSF46689	Homeodomain-like
YSA_00852	SSF53300	vWA-like
YSA_00862	SSF158682	TerB-like
YSA_00868	SSF56784	HAD-like
YSA_00871	SSF51621	Phosphoenolpyruvate/pyruvate domain
YSA_00873	SSF56784	HAD-like
YSA_00876	SSF53271	PRTase-like
YSA_00879	SSF50494	Trypsin-like serine proteases
YSA_00882	SSF56059	Glutathione synthetase ATP-binding domain-like
YSA_00898	SSF46955	Putative DNA-binding domain
YSA_00899	SSF47729	IHF-like DNA-binding proteins
YSA_00901	SSF46955	Putative DNA-binding domain
YSA_00901	SSF50249	Nucleic acid-binding proteins
YSA_00901	SSF54991	Anticodon-binding domain of PheRS
YSA_00901	SSF55681	Class II aaRS and biotin synthetases
YSA_00901	SSF56037	PheT/TilS domain
YSA_00903	SSF46589	tRNA-binding arm
YSA_00903	SSF55681	Class II aaRS and biotin synthetases
YSA_00904	SSF74731	Ribosomal protein L20
YSA_00905	SSF143034	L35p-like
YSA_00907	SSF54364	Translation initiation factor IF3, N-terminal domain
YSA_00907	SSF55200	Translation initiation factor IF3, C-terminal domain
YSA_00909	SSF52954	Class II aaRS ABD-related
YSA_00909	SSF55186	ThrRS/AlaRS common domain
YSA_00909	SSF55681	Class II aaRS and biotin synthetases
YSA_00909	SSF81271	TGS-like
YSA_00914	SSF50249	Nucleic acid-binding proteins
YSA_00919	SSF53590	Nucleoside hydrolase
YSA_00921	SSF102546	RbsD-like
YSA_00922	SSF53613	Ribokinase-like
YSA_00924	SSF47413	lambda repressor-like DNA-binding domains
YSA_00924	SSF53822	Periplasmic binding protein-like I
YSA_00928	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_00930	SSF53822	Periplasmic binding protein-like I
YSA_00932	SSF53774	Glutaminase/Asparaginase
YSA_00934	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_00934	SSF55785	PYP-like sensor domain (PAS domain)
YSA_00935	SSF47413	lambda repressor-like DNA-binding domains
YSA_00935	SSF55234	Cyanase C-terminal domain
YSA_00941	SSF54060	His-Me finger endonucleases
YSA_00942	SSF109604	HD-domain/PDEase-like
YSA_00943	SSF110997	Sporulation related repeat
YSA_00947	SSF51905	FAD/NAD(P)-binding domain
YSA_00957	SSF46785	"Winged helix" DNA-binding domain
YSA_00957	SSF53850	Periplasmic binding protein-like II
YSA_00959	SSF118215	Proton glutamate symport protein
YSA_00960	SSF46785	"Winged helix" DNA-binding domain
YSA_00964	SSF51905	FAD/NAD(P)-binding domain
YSA_00964	SSF52833	Thioredoxin-like
YSA_00966	SSF52833	Thioredoxin-like
YSA_00972	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
YSA_00972	SSF56645	Acyl-CoA dehydrogenase NM domain-like
YSA_00974	SSF46785	"Winged helix" DNA-binding domain
YSA_00974	SSF53850	Periplasmic binding protein-like II
YSA_00977	SSF53383	PLP-dependent transferases
YSA_00982	SSF55469	FMN-dependent nitroreductase-like
YSA_00984	SSF46785	"Winged helix" DNA-binding domain
YSA_00984	SSF53850	Periplasmic binding protein-like II
YSA_00986	SSF46689	Homeodomain-like
YSA_00986	SSF51215	Regulatory protein AraC
YSA_00989	SSF103473	MFS general substrate transporter
YSA_00992	SSF50969	YVTN repeat-like/Quinoprotein amine dehydrogenase
YSA_00995	SSF50129	GroES-like
YSA_00995	SSF51735	NAD(P)-binding Rossmann-fold domains
YSA_00996	SSF46689	Homeodomain-like
YSA_00997	SSF55144	LigT-like
YSA_00998	SSF51197	Clavaminate synthase-like
YSA_01000	SSF69118	AhpD-like
YSA_01002	SSF55729	Acyl-CoA N-acyltransferases (Nat)
YSA_01004	SSF56935	Porins
YSA_01008	SSF53807	"Helical backbone" metal receptor
YSA_01009	SSF81345	ABC transporter involved in vitamin B12 uptake, BtuC
YSA_01010	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_01012	SSF55729	Acyl-CoA N-acyltransferases (Nat)
YSA_01015	SSF103190	Sensory domain-like
YSA_01015	SSF55073	Nucleotide cyclase
YSA_01017	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_01019	SSF103473	MFS general substrate transporter
YSA_01021	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
YSA_01021	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
YSA_01021	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
YSA_01023	SSF111369	HlyD-like secretion proteins
YSA_01025	SSF56954	Outer membrane efflux proteins (OEP)
YSA_01026	SSF52304	Type II 3-dehydroquinate dehydratase
YSA_01027	SSF51735	NAD(P)-binding Rossmann-fold domains
YSA_01027	SSF53223	Aminoacid dehydrogenase-like, N-terminal domain
YSA_01029	SSF52833	Thioredoxin-like
YSA_01033	SSF46894	C-terminal effector domain of the bipartite response regulators
YSA_01033	SSF52172	CheY-like
YSA_01034	SSF47384	Homodimeric domain of signal transducing histidine kinase
YSA_01034	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
YSA_01039	SSF51658	Xylose isomerase-like
YSA_01040	SSF47473	EF-hand
YSA_01045	SSF52058	L domain-like
YSA_01049	SSF52058	L domain-like
YSA_01050	SSF53098	Ribonuclease H-like
YSA_01050	SSF56672	DNA/RNA polymerases
YSA_01052	SSF103473	MFS general substrate transporter
YSA_01053	SSF46785	"Winged helix" DNA-binding domain
YSA_01053	SSF53850	Periplasmic binding protein-like II
YSA_01054	SSF46785	"Winged helix" DNA-binding domain
YSA_01054	SSF53850	Periplasmic binding protein-like II
YSA_01059	SSF52266	SGNH hydrolase
YSA_01060	SSF81901	HCP-like
YSA_01065	SSF46689	Homeodomain-like
YSA_01065	SSF51215	Regulatory protein AraC
YSA_01069	SSF110087	DR1885-like metal-binding protein
YSA_01070	SSF52833	Thioredoxin-like
YSA_01073	SSF117916	Fe-S cluster assembly (FSCA) domain-like
YSA_01073	SSF89360	HesB-like domain
YSA_01079	SSF47644	Methionine synthase domain
YSA_01079	SSF51717	Dihydropteroate synthetase-like
YSA_01079	SSF52242	Cobalamin (vitamin B12)-binding domain
YSA_01079	SSF56507	Methionine synthase activation domain-like
YSA_01079	SSF82282	Homocysteine S-methyltransferase
YSA_01086	SSF53822	Periplasmic binding protein-like I
YSA_01088	SSF55124	Nitrite/Sulfite reductase N-terminal domain-like
YSA_01088	SSF56014	Nitrite and sulphite reductase 4Fe-4S domain-like
YSA_01094	SSF52058	L domain-like
YSA_01096	SSF51430	NAD(P)-linked oxidoreductase
YSA_01098	SSF103473	MFS general substrate transporter
YSA_01101	SSF103473	MFS general substrate transporter
YSA_01102	SSF46689	Homeodomain-like
YSA_01102	SSF51182	RmlC-like cupins
YSA_01105	SSF53187	Zn-dependent exopeptidases
YSA_01111	SSF49354	PapD-like
YSA_01120	SSF47384	Homodimeric domain of signal transducing histidine kinase
YSA_01120	SSF55781	GAF domain-like
YSA_01120	SSF55785	PYP-like sensor domain (PAS domain)
YSA_01120	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
YSA_01121	SSF52172	CheY-like
YSA_01122	SSF47384	Homodimeric domain of signal transducing histidine kinase
YSA_01122	SSF52172	CheY-like
YSA_01122	SSF55785	PYP-like sensor domain (PAS domain)
YSA_01122	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
YSA_01128	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_01129	SSF56801	Acetyl-CoA synthetase-like
YSA_01132	SSF46785	"Winged helix" DNA-binding domain
YSA_01132	SSF53850	Periplasmic binding protein-like II
YSA_01133	SSF54631	CBS-domain pair
YSA_01136	SSF47384	Homodimeric domain of signal transducing histidine kinase
YSA_01136	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
YSA_01137	SSF52172	CheY-like
YSA_01142	SSF52151	FabD/lysophospholipase-like
YSA_01143	SSF55620	Tetrahydrobiopterin biosynthesis enzymes-like
YSA_01150	SSF52016	LeuD/IlvD-like
YSA_01150	SSF53732	Aconitase iron-sulfur domain
YSA_01150	SSF74778	Aconitase B, N-terminal domain
YSA_01152	SSF103378	2-methylcitrate dehydratase PrpD
YSA_01153	SSF54506	Diaminopimelate epimerase-like
YSA_01156	SSF52016	LeuD/IlvD-like
YSA_01156	SSF53732	Aconitase iron-sulfur domain
YSA_01158	SSF48256	Citrate synthase
YSA_01160	SSF51621	Phosphoenolpyruvate/pyruvate domain
YSA_01162	SSF46785	"Winged helix" DNA-binding domain
YSA_01162	SSF48008	GntR ligand-binding domain-like
YSA_01164	SSF50630	Acid proteases
YSA_01167	SSF56059	Glutathione synthetase ATP-binding domain-like
YSA_01169	SSF56322	ADC synthase
YSA_01171	SSF52402	Adenine nucleotide alpha hydrolases-like
YSA_01174	SSF46785	"Winged helix" DNA-binding domain
YSA_01174	SSF53850	Periplasmic binding protein-like II
YSA_01175	SSF52402	Adenine nucleotide alpha hydrolases-like
YSA_01179	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
YSA_01179	SSF51735	NAD(P)-binding Rossmann-fold domains
YSA_01181	SSF51569	Aldolase
YSA_01183	SSF55729	Acyl-CoA N-acyltransferases (Nat)
YSA_01188	SSF141523	L,D-transpeptidase catalytic domain-like
YSA_01192	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_01193	SSF52266	SGNH hydrolase
YSA_01195	SSF46557	GreA transcript cleavage protein, N-terminal domain
YSA_01195	SSF54534	FKBP-like
YSA_01200	SSF53850	Periplasmic binding protein-like II
YSA_01200	SSF53955	Lysozyme-like
YSA_01201	SSF51556	Metallo-dependent hydrolases
YSA_01203	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
YSA_01206	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
YSA_01213	SSF52151	FabD/lysophospholipase-like
YSA_01216	SSF109998	Triger factor/SurA peptide-binding domain-like
YSA_01216	SSF54534	FKBP-like
YSA_01217	SSF47729	IHF-like DNA-binding proteins
YSA_01220	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_01220	SSF54211	Ribosomal protein S5 domain 2-like
YSA_01220	SSF88697	PUA domain-like
YSA_01224	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_01224	SSF57716	Glucocorticoid receptor-like (DNA-binding domain)
YSA_01225	SSF52096	ClpP/crotonase
YSA_01228	SSF102735	Trigger factor ribosome-binding domain
YSA_01228	SSF109998	Triger factor/SurA peptide-binding domain-like
YSA_01228	SSF54534	FKBP-like
YSA_01235	SSF51735	NAD(P)-binding Rossmann-fold domains
YSA_01235	SSF53223	Aminoacid dehydrogenase-like, N-terminal domain
YSA_01238	SSF53850	Periplasmic binding protein-like II
YSA_01242	SSF161098	MetI-like
YSA_01243	SSF161098	MetI-like
YSA_01244	SSF50331	MOP-like
YSA_01244	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_01246	SSF50331	MOP-like
YSA_01246	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_01248	SSF46689	Homeodomain-like
YSA_01248	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_01249	SSF141868	EAL domain-like
YSA_01249	SSF55073	Nucleotide cyclase
YSA_01249	SSF55785	PYP-like sensor domain (PAS domain)
YSA_01250	SSF55785	PYP-like sensor domain (PAS domain)
YSA_01250	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
YSA_01253	SSF47413	lambda repressor-like DNA-binding domains
YSA_01254	SSF118215	Proton glutamate symport protein
YSA_01256	SSF46785	"Winged helix" DNA-binding domain
YSA_01256	SSF48008	GntR ligand-binding domain-like
YSA_01257	SSF46785	"Winged helix" DNA-binding domain
YSA_01257	SSF48008	GntR ligand-binding domain-like
YSA_01265	SSF46785	"Winged helix" DNA-binding domain
YSA_01265	SSF53850	Periplasmic binding protein-like II
YSA_01267	SSF103190	Sensory domain-like
YSA_01267	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
YSA_01270	SSF55298	YjgF-like
YSA_01272	SSF51905	FAD/NAD(P)-binding domain
YSA_01274	SSF47413	lambda repressor-like DNA-binding domains
YSA_01274	SSF51182	RmlC-like cupins
YSA_01278	SSF53254	Phosphoglycerate mutase-like
YSA_01282	SSF56935	Porins
YSA_01284	SSF103473	MFS general substrate transporter
YSA_01286	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_01286	SSF90123	ABC transporter transmembrane region
YSA_01301	SSF103481	Multidrug resistance efflux transporter EmrE
YSA_01307	SSF53092	Creatinase/prolidase N-terminal domain
YSA_01307	SSF55920	Creatinase/aminopeptidase
YSA_01308	SSF56059	Glutathione synthetase ATP-binding domain-like
YSA_01309	SSF53474	alpha/beta-Hydrolases
YSA_01310	SSF54909	Dimeric alpha+beta barrel
YSA_01312	SSF46689	Homeodomain-like
YSA_01312	SSF52317	Class I glutamine amidotransferase-like
YSA_01314	SSF52499	Isochorismatase-like hydrolases
YSA_01316	SSF47413	lambda repressor-like DNA-binding domains
YSA_01316	SSF51182	RmlC-like cupins
YSA_01317	SSF103481	Multidrug resistance efflux transporter EmrE
YSA_01341	SSF109635	DnaK suppressor protein DksA, alpha-hairpin domain
YSA_01341	SSF57716	Glucocorticoid receptor-like (DNA-binding domain)
YSA_01349	SSF52096	ClpP/crotonase
YSA_01351	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
YSA_01351	SSF56645	Acyl-CoA dehydrogenase NM domain-like
YSA_01353	SSF53901	Thiolase-like
YSA_01355	SSF51735	NAD(P)-binding Rossmann-fold domains
YSA_01357	SSF56801	Acetyl-CoA synthetase-like
YSA_01362	SSF52058	L domain-like
YSA_01364	SSF46689	Homeodomain-like
YSA_01365	SSF46785	"Winged helix" DNA-binding domain
YSA_01365	SSF53850	Periplasmic binding protein-like II
YSA_01367	SSF53383	PLP-dependent transferases
YSA_01369	SSF56784	HAD-like
YSA_01377	SSF52833	Thioredoxin-like
YSA_01379	SSF53474	alpha/beta-Hydrolases
YSA_01381	SSF109854	DinB/YfiT-like putative metalloenzymes
YSA_01382	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_01384	SSF50952	Soluble quinoprotein glucose dehydrogenase
YSA_01387	SSF52768	Arginase/deacetylase
YSA_01388	SSF53850	Periplasmic binding protein-like II
YSA_01389	SSF46785	"Winged helix" DNA-binding domain
YSA_01389	SSF53850	Periplasmic binding protein-like II
YSA_01391	SSF56935	Porins
YSA_01395	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
YSA_01395	SSF88946	Sigma2 domain of RNA polymerase sigma factors
YSA_01396	SSF117070	LEA14-like
YSA_01399	SSF47240	Ferritin-like
YSA_01400	SSF52402	Adenine nucleotide alpha hydrolases-like
YSA_01404	SSF50692	ADC-like
YSA_01404	SSF53706	Formate dehydrogenase/DMSO reductase, domains 1-3
YSA_01404	SSF54292	2Fe-2S ferredoxin-like
YSA_01404	SSF54862	4Fe-4S ferredoxins
YSA_01406	SSF140490	Nqo1C-terminal domain-like
YSA_01406	SSF142019	Nqo1 FMN-binding domain-like
YSA_01406	SSF142984	Nqo1 middle domain-like
YSA_01408	SSF52833	Thioredoxin-like
YSA_01410	SSF48657	FinO-like
YSA_01412	SSF47413	lambda repressor-like DNA-binding domains
YSA_01412	SSF51182	RmlC-like cupins
YSA_01416	SSF53383	PLP-dependent transferases
YSA_01418	SSF52317	Class I glutamine amidotransferase-like
YSA_01420	SSF55931	Glutamine synthetase/guanido kinase
YSA_01421	SSF47413	lambda repressor-like DNA-binding domains
YSA_01421	SSF51182	RmlC-like cupins
YSA_01423	SSF46785	"Winged helix" DNA-binding domain
YSA_01423	SSF53850	Periplasmic binding protein-like II
YSA_01424	SSF51735	NAD(P)-binding Rossmann-fold domains
YSA_01428	SSF46689	Homeodomain-like
YSA_01428	SSF55136	Probable bacterial effector-binding domain
YSA_01430	SSF46689	Homeodomain-like
YSA_01430	SSF48498	Tetracyclin repressor-like, C-terminal domain
YSA_01440	SSF48600	Chorismate mutase II
YSA_01442	SSF50156	PDZ domain-like
YSA_01446	SSF51395	FMN-linked oxidoreductases
YSA_01447	SSF51569	Aldolase
YSA_01449	SSF56300	Metallo-dependent phosphatases
YSA_01452	SSF52091	SpoIIaa-like
YSA_01453	SSF52172	CheY-like
YSA_01455	SSF141371	PilZ domain-like
YSA_01458	SSF56784	HAD-like
YSA_01462	SSF55620	Tetrahydrobiopterin biosynthesis enzymes-like
YSA_01463	SSF49503	Cupredoxins
YSA_01465	SSF46894	C-terminal effector domain of the bipartite response regulators
YSA_01465	SSF52172	CheY-like
YSA_01466	SSF158472	HAMP domain-like
YSA_01466	SSF47384	Homodimeric domain of signal transducing histidine kinase
YSA_01466	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
YSA_01469	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_01472	SSF51695	PLC-like phosphodiesterases
YSA_01473	SSF51905	FAD/NAD(P)-binding domain
YSA_01473	SSF55424	FAD/NAD-linked reductases, dimerisation (C-terminal) domain
YSA_01476	SSF143631	ApbE-like
YSA_01477	SSF51735	NAD(P)-binding Rossmann-fold domains
YSA_01477	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
YSA_01480	SSF141259	CarD-like
YSA_01480	SSF143517	TRCF domain-like
YSA_01480	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_01484	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_01486	SSF51445	(Trans)glycosidases
YSA_01489	SSF46689	Homeodomain-like
YSA_01489	SSF48498	Tetracyclin repressor-like, C-terminal domain
YSA_01490	SSF46785	"Winged helix" DNA-binding domain
YSA_01490	SSF51306	LexA/Signal peptidase
YSA_01492	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_01498	SSF56712	Prokaryotic type I DNA topoisomerase
YSA_01498	SSF57783	Zinc beta-ribbon
YSA_01501	SSF53901	Thiolase-like
YSA_01503	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
YSA_01503	SSF51735	NAD(P)-binding Rossmann-fold domains
YSA_01503	SSF52096	ClpP/crotonase
YSA_01510	SSF52402	Adenine nucleotide alpha hydrolases-like
YSA_01513	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_01515	SSF48435	Bacterial muramidases
YSA_01515	SSF53955	Lysozyme-like
YSA_01516	SSF141673	MOSC N-terminal domain-like
YSA_01516	SSF50800	PK beta-barrel domain-like
YSA_01518	SSF50341	CheW-like
YSA_01518	SSF52172	CheY-like
YSA_01526	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
YSA_01527	SSF46894	C-terminal effector domain of the bipartite response regulators
YSA_01527	SSF52172	CheY-like
YSA_01528	SSF111331	NAD kinase/diacylglycerol kinase-like
YSA_01530	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
YSA_01531	SSF53218	Molybdenum cofactor biosynthesis proteins
YSA_01531	SSF63867	MoeA C-terminal domain-like
YSA_01531	SSF63882	MoeA N-terminal region -like
YSA_01533	SSF53218	Molybdenum cofactor biosynthesis proteins
YSA_01534	SSF50182	Sm-like ribonucleoproteins
YSA_01537	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
YSA_01539	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_01539	SSF90123	ABC transporter transmembrane region
YSA_01544	SSF51735	NAD(P)-binding Rossmann-fold domains
YSA_01544	SSF52283	Formate/glycerate dehydrogenase catalytic domain-like
YSA_01546	SSF64307	SirA-like
YSA_01549	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
YSA_01552	SSF52016	LeuD/IlvD-like
YSA_01552	SSF53732	Aconitase iron-sulfur domain
YSA_01554	SSF55785	PYP-like sensor domain (PAS domain)
YSA_01554	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
YSA_01557	SSF55120	Pseudouridine synthase
YSA_01560	SSF55166	Hedgehog/DD-peptidase
YSA_01564	SSF52833	Thioredoxin-like
YSA_01565	SSF111352	Ammonium transporter
YSA_01574	SSF109604	HD-domain/PDEase-like
YSA_01577	SSF46894	C-terminal effector domain of the bipartite response regulators
YSA_01577	SSF52172	CheY-like
YSA_01578	SSF47226	Histidine-containing phosphotransfer domain, HPT domain
YSA_01578	SSF47384	Homodimeric domain of signal transducing histidine kinase
YSA_01578	SSF52172	CheY-like
YSA_01578	SSF53850	Periplasmic binding protein-like II
YSA_01578	SSF55785	PYP-like sensor domain (PAS domain)
YSA_01578	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
YSA_01582	SSF56601	beta-lactamase/transpeptidase-like
YSA_01583	SSF55073	Nucleotide cyclase
YSA_01583	SSF55785	PYP-like sensor domain (PAS domain)
YSA_01589	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
YSA_01595	SSF51395	FMN-linked oxidoreductases
YSA_01597	SSF53850	Periplasmic binding protein-like II
YSA_01599	SSF52172	CheY-like
YSA_01602	SSF103473	MFS general substrate transporter
YSA_01604	SSF56112	Protein kinase-like (PK-like)
YSA_01604	SSF81606	PP2C-like
YSA_01606	SSF53790	Tetrapyrrole methylase
YSA_01607	SSF103088	OmpA-like
YSA_01607	SSF103647	TSP type-3 repeat
YSA_01607	SSF56925	OMPA-like
YSA_01609	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
YSA_01609	SSF88946	Sigma2 domain of RNA polymerase sigma factors
YSA_01612	SSF50182	Sm-like ribonucleoproteins
YSA_01616	SSF143865	CorA soluble domain-like
YSA_01616	SSF144083	Magnesium transport protein CorA, transmembrane region
YSA_01617	SSF89562	RraA-like
YSA_01619	SSF53474	alpha/beta-Hydrolases
YSA_01620	SSF51621	Phosphoenolpyruvate/pyruvate domain
YSA_01620	SSF52009	Phosphohistidine domain
YSA_01620	SSF56059	Glutathione synthetase ATP-binding domain-like
YSA_01626	SSF51735	NAD(P)-binding Rossmann-fold domains
YSA_01626	SSF53223	Aminoacid dehydrogenase-like, N-terminal domain
YSA_01629	SSF46785	"Winged helix" DNA-binding domain
YSA_01629	SSF53850	Periplasmic binding protein-like II
YSA_01632	SSF50621	Alanine racemase C-terminal domain-like
YSA_01632	SSF51419	PLP-binding barrel
YSA_01633	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
YSA_01633	SSF88946	Sigma2 domain of RNA polymerase sigma factors
YSA_01637	SSF56935	Porins
YSA_01645	SSF46785	"Winged helix" DNA-binding domain
YSA_01645	SSF53850	Periplasmic binding protein-like II
YSA_01646	SSF55729	Acyl-CoA N-acyltransferases (Nat)
YSA_01647	SSF46689	Homeodomain-like
YSA_01647	SSF51215	Regulatory protein AraC
YSA_01648	SSF51182	RmlC-like cupins
YSA_01652	SSF46689	Homeodomain-like
YSA_01652	SSF51182	RmlC-like cupins
YSA_01653	SSF56954	Outer membrane efflux proteins (OEP)
YSA_01654	SSF111369	HlyD-like secretion proteins
YSA_01655	SSF103473	MFS general substrate transporter
YSA_01657	SSF46785	"Winged helix" DNA-binding domain
YSA_01657	SSF64288	Chorismate lyase-like
YSA_01658	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
YSA_01658	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
YSA_01658	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
YSA_01660	SSF111369	HlyD-like secretion proteins
YSA_01661	SSF46955	Putative DNA-binding domain
YSA_01662	SSF69047	Hypothetical protein YjbJ
YSA_01670	SSF118215	Proton glutamate symport protein
YSA_01671	SSF54506	Diaminopimelate epimerase-like
YSA_01674	SSF46785	"Winged helix" DNA-binding domain
YSA_01674	SSF53850	Periplasmic binding protein-like II
YSA_01681	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
YSA_01681	SSF56784	HAD-like
YSA_01683	SSF53901	Thiolase-like
YSA_01684	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
YSA_01685	SSF56796	Dehydroquinate synthase-like
YSA_01688	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
YSA_01688	SSF56645	Acyl-CoA dehydrogenase NM domain-like
YSA_01689	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
YSA_01689	SSF51735	NAD(P)-binding Rossmann-fold domains
YSA_01691	SSF46785	"Winged helix" DNA-binding domain
YSA_01691	SSF53850	Periplasmic binding protein-like II
YSA_01694	SSF55718	SCP-like
YSA_01694	SSF56281	Metallo-hydrolase/oxidoreductase
YSA_01707	SSF46785	"Winged helix" DNA-binding domain
YSA_01707	SSF53850	Periplasmic binding protein-like II
YSA_01708	SSF103473	MFS general substrate transporter
YSA_01709	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
YSA_01709	SSF56645	Acyl-CoA dehydrogenase NM domain-like
YSA_01711	SSF56801	Acetyl-CoA synthetase-like
YSA_01712	SSF53639	AraD/HMP-PK domain-like
YSA_01714	SSF51569	Aldolase
YSA_01719	SSF103473	MFS general substrate transporter
YSA_01721	SSF53474	alpha/beta-Hydrolases
YSA_01724	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_01728	SSF53300	vWA-like
YSA_01730	SSF48452	TPR-like
YSA_01730	SSF53300	vWA-like
YSA_01736	SSF56300	Metallo-dependent phosphatases
YSA_01738	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_01739	SSF47616	GST C-terminal domain-like
YSA_01739	SSF52833	Thioredoxin-like
YSA_01743	SSF51004	C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
YSA_01748	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
YSA_01749	SSF110296	Oligoxyloglucan reducing end-specific cellobiohydrolase
YSA_01752	SSF55486	Metalloproteases ("zincins"), catalytic domain
YSA_01752	SSF63737	Leukotriene A4 hydrolase N-terminal domain
YSA_01757	SSF144091	Rhomboid-like
YSA_01758	SSF56300	Metallo-dependent phosphatases
YSA_01760	SSF111331	NAD kinase/diacylglycerol kinase-like
YSA_01764	SSF81342	Transmembrane di-heme cytochromes
YSA_01765	SSF53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes
YSA_01767	SSF51395	FMN-linked oxidoreductases
YSA_01767	SSF51905	FAD/NAD(P)-binding domain
YSA_01767	SSF51971	Nucleotide-binding domain
YSA_01770	SSF46689	Homeodomain-like
YSA_01775	SSF50129	GroES-like
YSA_01775	SSF51735	NAD(P)-binding Rossmann-fold domains
YSA_01776	SSF51735	NAD(P)-binding Rossmann-fold domains
YSA_01783	SSF46689	Homeodomain-like
YSA_01787	SSF46785	"Winged helix" DNA-binding domain
YSA_01787	SSF53850	Periplasmic binding protein-like II
YSA_01788	SSF51735	NAD(P)-binding Rossmann-fold domains
YSA_01790	SSF54909	Dimeric alpha+beta barrel
YSA_01791	SSF51735	NAD(P)-binding Rossmann-fold domains
YSA_01795	SSF49354	PapD-like
YSA_01795	SSF49584	Periplasmic chaperone C-domain
YSA_01798	SSF49401	Bacterial adhesins
YSA_01800	SSF47384	Homodimeric domain of signal transducing histidine kinase
YSA_01800	SSF52172	CheY-like
YSA_01800	SSF55785	PYP-like sensor domain (PAS domain)
YSA_01800	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
YSA_01802	SSF141868	EAL domain-like
YSA_01802	SSF52172	CheY-like
YSA_01804	SSF47226	Histidine-containing phosphotransfer domain, HPT domain
YSA_01804	SSF47384	Homodimeric domain of signal transducing histidine kinase
YSA_01804	SSF52172	CheY-like
YSA_01804	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
YSA_01806	SSF46894	C-terminal effector domain of the bipartite response regulators
YSA_01806	SSF52172	CheY-like
YSA_01807	SSF49401	Bacterial adhesins
YSA_01809	SSF49354	PapD-like
YSA_01809	SSF49584	Periplasmic chaperone C-domain
YSA_01812	SSF141729	FimD N-terminal domain-like
YSA_01815	SSF56317	Carbon-nitrogen hydrolase
YSA_01817	SSF46689	Homeodomain-like
YSA_01819	SSF51735	NAD(P)-binding Rossmann-fold domains
YSA_01821	SSF53383	PLP-dependent transferases
YSA_01822	SSF53271	PRTase-like
YSA_01822	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
YSA_01830	SSF110997	Sporulation related repeat
YSA_01832	SSF53244	MurD-like peptide ligases, peptide-binding domain
YSA_01832	SSF53623	MurD-like peptide ligases, catalytic domain
YSA_01833	SSF52096	ClpP/crotonase
YSA_01835	SSF51366	Ribulose-phoshate binding barrel
YSA_01837	SSF55120	Pseudouridine synthase
YSA_01842	SSF51735	NAD(P)-binding Rossmann-fold domains
YSA_01842	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
YSA_01849	SSF51735	NAD(P)-binding Rossmann-fold domains
YSA_01849	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
YSA_01850	SSF53659	Isocitrate/Isopropylmalate dehydrogenase-like
YSA_01852	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
YSA_01853	SSF52016	LeuD/IlvD-like
YSA_01854	SSF53732	Aconitase iron-sulfur domain
YSA_01857	SSF46785	"Winged helix" DNA-binding domain
YSA_01857	SSF53850	Periplasmic binding protein-like II
YSA_01859	SSF141868	EAL domain-like
YSA_01859	SSF55073	Nucleotide cyclase
YSA_01859	SSF55785	PYP-like sensor domain (PAS domain)
YSA_01860	SSF49764	HSP20-like chaperones
YSA_01862	SSF51395	FMN-linked oxidoreductases
YSA_01863	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
YSA_01865	SSF53474	alpha/beta-Hydrolases
YSA_01866	SSF46689	Homeodomain-like
YSA_01866	SSF48498	Tetracyclin repressor-like, C-terminal domain
YSA_01871	SSF48163	An anticodon-binding domain of class I aminoacyl-tRNA synthetases
YSA_01871	SSF52374	Nucleotidylyl transferase
YSA_01872	SSF111369	HlyD-like secretion proteins
YSA_01874	SSF103473	MFS general substrate transporter
YSA_01876	SSF46600	C-terminal UvrC-binding domain of UvrB
YSA_01876	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_01878	SSF53383	PLP-dependent transferases
YSA_01884	SSF51182	RmlC-like cupins
YSA_01889	SSF102114	Radical SAM enzymes
YSA_01890	SSF46689	Homeodomain-like
YSA_01890	SSF48498	Tetracyclin repressor-like, C-terminal domain
YSA_01893	SSF51556	Metallo-dependent hydrolases
YSA_01895	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_01896	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_01900	SSF56752	D-aminoacid aminotransferase-like PLP-dependent enzymes
YSA_01903	SSF53901	Thiolase-like
YSA_01905	SSF47336	ACP-like
YSA_01907	SSF51735	NAD(P)-binding Rossmann-fold domains
YSA_01909	SSF52151	FabD/lysophospholipase-like
YSA_01909	SSF55048	Probable ACP-binding domain of malonyl-CoA ACP transacylase
YSA_01911	SSF53659	Isocitrate/Isopropylmalate dehydrogenase-like
YSA_01913	SSF57829	Zn-binding ribosomal proteins
YSA_01916	SSF52972	ITPase-like
YSA_01917	SSF52096	ClpP/crotonase
YSA_01920	SSF56784	HAD-like
YSA_01922	SSF55120	Pseudouridine synthase
YSA_01922	SSF55174	Alpha-L RNA-binding motif
YSA_01924	SSF50249	Nucleic acid-binding proteins
YSA_01927	SSF56176	FAD-binding/transporter-associated domain-like
YSA_01927	SSF56194	Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase, MurB, C-terminal domain
YSA_01928	SSF52788	Phosphotyrosine protein phosphatases I
YSA_01930	SSF53448	Nucleotide-diphospho-sugar transferases
YSA_01932	SSF158997	Trm112p-like
YSA_01935	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_01942	SSF56281	Metallo-hydrolase/oxidoreductase
YSA_01947	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_01950	SSF47616	GST C-terminal domain-like
YSA_01950	SSF52833	Thioredoxin-like
YSA_01954	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
YSA_01954	SSF56645	Acyl-CoA dehydrogenase NM domain-like
YSA_01958	SSF49401	Bacterial adhesins
YSA_01961	SSF49354	PapD-like
YSA_01961	SSF49584	Periplasmic chaperone C-domain
YSA_01965	SSF103515	Autotransporter
YSA_01965	SSF51126	Pectin lyase-like
YSA_01995	SSF141729	FimD N-terminal domain-like
YSA_01996	SSF49401	Bacterial adhesins
YSA_02005	SSF55781	GAF domain-like
YSA_02007	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_02009	SSF47384	Homodimeric domain of signal transducing histidine kinase
YSA_02009	SSF52172	CheY-like
YSA_02009	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
YSA_02010	SSF52833	Thioredoxin-like
YSA_02011	SSF51316	Mss4-like
YSA_02012	SSF53383	PLP-dependent transferases
YSA_02015	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
YSA_02018	SSF53213	LigB-like
YSA_02020	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_02022	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
YSA_02025	SSF51569	Aldolase
YSA_02028	SSF46785	"Winged helix" DNA-binding domain
YSA_02028	SSF53850	Periplasmic binding protein-like II
YSA_02031	SSF46785	"Winged helix" DNA-binding domain
YSA_02031	SSF53850	Periplasmic binding protein-like II
YSA_02034	SSF46785	"Winged helix" DNA-binding domain
YSA_02037	SSF82784	OsmC-like
YSA_02038	SSF50104	Translation proteins SH3-like domain
YSA_02038	SSF50249	Nucleic acid-binding proteins
YSA_02044	SSF54534	FKBP-like
YSA_02045	SSF46785	"Winged helix" DNA-binding domain
YSA_02045	SSF53850	Periplasmic binding protein-like II
YSA_02046	SSF51735	NAD(P)-binding Rossmann-fold domains
YSA_02048	SSF46785	"Winged helix" DNA-binding domain
YSA_02048	SSF53850	Periplasmic binding protein-like II
YSA_02049	SSF103473	MFS general substrate transporter
YSA_02055	SSF56935	Porins
YSA_02060	SSF52096	ClpP/crotonase
YSA_02061	SSF69593	Glycerol-3-phosphate (1)-acyltransferase
YSA_02064	SSF143865	CorA soluble domain-like
YSA_02064	SSF144083	Magnesium transport protein CorA, transmembrane region
YSA_02066	SSF52317	Class I glutamine amidotransferase-like
YSA_02069	SSF46626	Cytochrome c
YSA_02070	SSF89946	Hypothetical protein VC0424
YSA_02075	SSF53649	Alkaline phosphatase-like
YSA_02084	SSF48403	Ankyrin repeat
YSA_02088	SSF103473	MFS general substrate transporter
YSA_02089	SSF51182	RmlC-like cupins
YSA_02092	SSF103263	Chorismate synthase, AroC
YSA_02094	SSF53474	alpha/beta-Hydrolases
YSA_02097	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
YSA_02100	SSF52499	Isochorismatase-like hydrolases
YSA_02102	SSF160443	SMR domain-like
YSA_02104	SSF55620	Tetrahydrobiopterin biosynthesis enzymes-like
YSA_02106	SSF52833	Thioredoxin-like
YSA_02108	SSF47616	GST C-terminal domain-like
YSA_02108	SSF52833	Thioredoxin-like
YSA_02115	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
YSA_02120	SSF51735	NAD(P)-binding Rossmann-fold domains
YSA_02123	SSF50129	GroES-like
YSA_02123	SSF51735	NAD(P)-binding Rossmann-fold domains
YSA_02125	SSF51366	Ribulose-phoshate binding barrel
YSA_02128	SSF47781	RuvA domain 2-like
YSA_02143	SSF53697	SIS domain
YSA_02147	SSF51569	Aldolase
YSA_02150	SSF53697	SIS domain
YSA_02152	SSF51735	NAD(P)-binding Rossmann-fold domains
YSA_02157	SSF51735	NAD(P)-binding Rossmann-fold domains
YSA_02161	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
YSA_02162	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
YSA_02163	SSF51735	NAD(P)-binding Rossmann-fold domains
YSA_02165	SSF51735	NAD(P)-binding Rossmann-fold domains
YSA_02166	SSF56954	Outer membrane efflux proteins (OEP)
YSA_02167	SSF111369	HlyD-like secretion proteins
YSA_02170	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_02170	SSF90123	ABC transporter transmembrane region
YSA_02175	SSF51120	beta-Roll
YSA_02179	SSF48452	TPR-like
YSA_02179	SSF53448	Nucleotide-diphospho-sugar transferases
YSA_02183	SSF53448	Nucleotide-diphospho-sugar transferases
YSA_02188	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
YSA_02188	SSF56784	HAD-like
YSA_02190	SSF51735	NAD(P)-binding Rossmann-fold domains
YSA_02198	SSF51735	NAD(P)-binding Rossmann-fold domains
YSA_02200	SSF51735	NAD(P)-binding Rossmann-fold domains
YSA_02201	SSF53448	Nucleotide-diphospho-sugar transferases
YSA_02203	SSF51182	RmlC-like cupins
YSA_02207	SSF56300	Metallo-dependent phosphatases
YSA_02208	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
YSA_02210	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
YSA_02210	SSF56112	Protein kinase-like (PK-like)
YSA_02212	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_02215	SSF53738	Phosphoglucomutase, first 3 domains
YSA_02215	SSF55957	Phosphoglucomutase, C-terminal domain
YSA_02217	SSF51182	RmlC-like cupins
YSA_02217	SSF53448	Nucleotide-diphospho-sugar transferases
YSA_02226	SSF56281	Metallo-hydrolase/oxidoreductase
YSA_02229	SSF47729	IHF-like DNA-binding proteins
YSA_02233	SSF50249	Nucleic acid-binding proteins
YSA_02234	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_02236	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
YSA_02236	SSF51735	NAD(P)-binding Rossmann-fold domains
YSA_02236	SSF55205	EPT/RTPC-like
YSA_02238	SSF48600	Chorismate mutase II
YSA_02238	SSF53850	Periplasmic binding protein-like II
YSA_02238	SSF55021	ACT-like
YSA_02241	SSF53383	PLP-dependent transferases
YSA_02244	SSF101904	GyrA/ParC C-terminal domain-like
YSA_02244	SSF56719	Type II DNA topoisomerase
YSA_02246	SSF100950	NagB/RpiA/CoA transferase-like
YSA_02248	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
YSA_02249	SSF56784	HAD-like
YSA_02250	SSF51735	NAD(P)-binding Rossmann-fold domains
YSA_02252	SSF48613	Heme oxygenase-like
YSA_02254	SSF141868	EAL domain-like
YSA_02254	SSF55073	Nucleotide cyclase
YSA_02254	SSF55785	PYP-like sensor domain (PAS domain)
YSA_02255	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_02255	SSF90123	ABC transporter transmembrane region
YSA_02256	SSF52833	Thioredoxin-like
YSA_02257	SSF52821	Rhodanese/Cell cycle control phosphatase
YSA_02259	SSF82657	BolA-like
YSA_02264	SSF48557	L-aspartase-like
YSA_02265	SSF103481	Multidrug resistance efflux transporter EmrE
YSA_02267	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_02269	SSF51905	FAD/NAD(P)-binding domain
YSA_02269	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
YSA_02272	SSF52402	Adenine nucleotide alpha hydrolases-like
YSA_02272	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
YSA_02274	SSF55729	Acyl-CoA N-acyltransferases (Nat)
YSA_02274	SSF56059	Glutathione synthetase ATP-binding domain-like
YSA_02276	SSF101821	Aminopeptidase/glucanase lid domain
YSA_02276	SSF53187	Zn-dependent exopeptidases
YSA_02278	SSF118001	YehU-like
YSA_02280	SSF117130	CsrA-like
YSA_02281	SSF51735	NAD(P)-binding Rossmann-fold domains
YSA_02287	SSF49354	PapD-like
YSA_02298	SSF53850	Periplasmic binding protein-like II
YSA_02300	SSF51445	(Trans)glycosidases
YSA_02305	SSF53474	alpha/beta-Hydrolases
YSA_02310	SSF52151	FabD/lysophospholipase-like
YSA_02314	SSF63848	Cell-division inhibitor MinC, C-terminal domain
YSA_02315	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_02318	SSF55229	Cell division protein MinE topological specificity domain
YSA_02320	SSF55120	Pseudouridine synthase
YSA_02321	SSF101821	Aminopeptidase/glucanase lid domain
YSA_02321	SSF53187	Zn-dependent exopeptidases
YSA_02325	SSF50182	Sm-like ribonucleoproteins
YSA_02325	SSF82689	Mechanosensitive channel protein MscS (YggB), C-terminal domain
YSA_02325	SSF82861	Mechanosensitive channel protein MscS (YggB), transmembrane region
YSA_02326	SSF46785	"Winged helix" DNA-binding domain
YSA_02326	SSF64288	Chorismate lyase-like
YSA_02327	SSF53850	Periplasmic binding protein-like II
YSA_02329	SSF53649	Alkaline phosphatase-like
YSA_02331	SSF161098	MetI-like
YSA_02332	SSF161098	MetI-like
YSA_02334	SSF50331	MOP-like
YSA_02334	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_02335	SSF56784	HAD-like
YSA_02336	SSF50129	GroES-like
YSA_02336	SSF51735	NAD(P)-binding Rossmann-fold domains
YSA_02338	SSF50156	PDZ domain-like
YSA_02338	SSF52096	ClpP/crotonase
YSA_02340	SSF141868	EAL domain-like
YSA_02345	SSF47413	lambda repressor-like DNA-binding domains
YSA_02348	SSF54534	FKBP-like
YSA_02351	SSF46785	"Winged helix" DNA-binding domain
YSA_02351	SSF53850	Periplasmic binding protein-like II
YSA_02361	SSF46689	Homeodomain-like
YSA_02361	SSF51215	Regulatory protein AraC
YSA_02364	SSF103473	MFS general substrate transporter
YSA_02366	SSF56529	FAH
YSA_02367	SSF51735	NAD(P)-binding Rossmann-fold domains
YSA_02369	SSF51735	NAD(P)-binding Rossmann-fold domains
YSA_02369	SSF52283	Formate/glycerate dehydrogenase catalytic domain-like
YSA_02370	SSF50022	ISP domain
YSA_02371	SSF51905	FAD/NAD(P)-binding domain
YSA_02371	SSF55124	Nitrite/Sulfite reductase N-terminal domain-like
YSA_02371	SSF56014	Nitrite and sulphite reductase 4Fe-4S domain-like
YSA_02377	SSF50692	ADC-like
YSA_02377	SSF52218	Flavoproteins
YSA_02377	SSF52343	Ferredoxin reductase-like, C-terminal NADP-linked domain
YSA_02377	SSF53706	Formate dehydrogenase/DMSO reductase, domains 1-3
YSA_02377	SSF63380	Riboflavin synthase domain-like
YSA_02378	SSF55920	Creatinase/aminopeptidase
YSA_02381	SSF103481	Multidrug resistance efflux transporter EmrE
YSA_02383	SSF103473	MFS general substrate transporter
YSA_02383	SSF69593	Glycerol-3-phosphate (1)-acyltransferase
YSA_02385	SSF51556	Metallo-dependent hydrolases
YSA_02387	SSF103473	MFS general substrate transporter
YSA_02388	SSF46785	"Winged helix" DNA-binding domain
YSA_02388	SSF64288	Chorismate lyase-like
YSA_02389	SSF103473	MFS general substrate transporter
YSA_02394	SSF47384	Homodimeric domain of signal transducing histidine kinase
YSA_02394	SSF52172	CheY-like
YSA_02394	SSF55785	PYP-like sensor domain (PAS domain)
YSA_02394	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
YSA_02397	SSF81901	HCP-like
YSA_02406	SSF56935	Porins
YSA_02409	SSF46785	"Winged helix" DNA-binding domain
YSA_02409	SSF53850	Periplasmic binding protein-like II
YSA_02414	SSF52833	Thioredoxin-like
YSA_02417	SSF103473	MFS general substrate transporter
YSA_02418	SSF46785	"Winged helix" DNA-binding domain
YSA_02420	SSF51445	(Trans)glycosidases
YSA_02423	SSF53254	Phosphoglycerate mutase-like
YSA_02426	SSF52733	Nicotinate mononucleotide:5,6-dimethylbenzimidazole phosphoribosyltransferase (CobT)
YSA_02427	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_02428	SSF52317	Class I glutamine amidotransferase-like
YSA_02428	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_02429	SSF53383	PLP-dependent transferases
YSA_02431	SSF55469	FMN-dependent nitroreductase-like
YSA_02433	SSF52317	Class I glutamine amidotransferase-like
YSA_02433	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_02434	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_02435	SSF54001	Cysteine proteinases
YSA_02436	SSF54001	Cysteine proteinases
YSA_02439	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_02447	SSF55326	PurM N-terminal domain-like
YSA_02447	SSF56042	PurM C-terminal domain-like
YSA_02450	SSF53328	Formyltransferase
YSA_02456	SSF51905	FAD/NAD(P)-binding domain
YSA_02466	SSF101386	all-alpha NTP pyrophosphatases
YSA_02467	SSF109604	HD-domain/PDEase-like
YSA_02467	SSF55021	ACT-like
YSA_02467	SSF81271	TGS-like
YSA_02467	SSF81301	Nucleotidyltransferase
YSA_02469	SSF50249	Nucleic acid-binding proteins
YSA_02469	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
YSA_02470	SSF53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes
YSA_02472	SSF158472	HAMP domain-like
YSA_02472	SSF47384	Homodimeric domain of signal transducing histidine kinase
YSA_02472	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
YSA_02474	SSF52172	CheY-like
YSA_02476	SSF158472	HAMP domain-like
YSA_02476	SSF47226	Histidine-containing phosphotransfer domain, HPT domain
YSA_02476	SSF47384	Homodimeric domain of signal transducing histidine kinase
YSA_02476	SSF52172	CheY-like
YSA_02476	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
YSA_02479	SSF51735	NAD(P)-binding Rossmann-fold domains
YSA_02479	SSF52283	Formate/glycerate dehydrogenase catalytic domain-like
YSA_02484	SSF52833	Thioredoxin-like
YSA_02486	SSF52833	Thioredoxin-like
YSA_02487	SSF52218	Flavoproteins
YSA_02490	SSF48150	DNA-glycosylase
YSA_02493	SSF52402	Adenine nucleotide alpha hydrolases-like
YSA_02498	SSF52343	Ferredoxin reductase-like, C-terminal NADP-linked domain
YSA_02498	SSF63380	Riboflavin synthase domain-like
YSA_02499	SSF46785	"Winged helix" DNA-binding domain
YSA_02499	SSF53850	Periplasmic binding protein-like II
YSA_02502	SSF52172	CheY-like
YSA_02509	SSF102405	MCP/YpsA-like
YSA_02513	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_02513	SSF54752	RecA protein, C-terminal domain
YSA_02514	SSF142433	CinA-like
YSA_02517	SSF53448	Nucleotide-diphospho-sugar transferases
YSA_02519	SSF48334	DNA repair protein MutS, domain III
YSA_02519	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_02519	SSF53150	DNA repair protein MutS, domain II
YSA_02519	SSF55271	DNA repair protein MutS, domain I
YSA_02520	SSF54862	4Fe-4S ferredoxins
YSA_02526	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
YSA_02526	SSF88946	Sigma2 domain of RNA polymerase sigma factors
YSA_02528	SSF51261	Duplicated hybrid motif
YSA_02529	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
YSA_02531	SSF64167	SurE-like
YSA_02534	SSF55120	Pseudouridine synthase
YSA_02535	SSF69765	IpsF-like
YSA_02536	SSF53474	alpha/beta-Hydrolases
YSA_02538	SSF50129	GroES-like
YSA_02538	SSF51735	NAD(P)-binding Rossmann-fold domains
YSA_02541	SSF46785	"Winged helix" DNA-binding domain
YSA_02541	SSF53850	Periplasmic binding protein-like II
YSA_02542	SSF53448	Nucleotide-diphospho-sugar transferases
YSA_02547	SSF51604	Enolase C-terminal domain-like
YSA_02547	SSF54826	Enolase N-terminal domain-like
YSA_02548	SSF51569	Aldolase
YSA_02550	SSF52317	Class I glutamine amidotransferase-like
YSA_02550	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_02553	SSF52402	Adenine nucleotide alpha hydrolases-like
YSA_02553	SSF56037	PheT/TilS domain
YSA_02553	SSF82829	MesJ substrate recognition domain-like
YSA_02554	SSF52096	ClpP/crotonase
YSA_02557	SSF89550	PHP domain-like
YSA_02558	SSF53098	Ribonuclease H-like
YSA_02559	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
YSA_02560	SSF51161	Trimeric LpxA-like enzymes
YSA_02562	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
YSA_02563	SSF51161	Trimeric LpxA-like enzymes
YSA_02564	SSF111384	OmpH-like
YSA_02568	SSF50156	PDZ domain-like
YSA_02570	SSF51735	NAD(P)-binding Rossmann-fold domains
YSA_02570	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
YSA_02570	SSF69055	1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain
YSA_02572	SSF64005	Undecaprenyl diphosphate synthase
YSA_02573	SSF55194	Ribosome recycling factor, RRF
YSA_02575	SSF53633	Carbamate kinase-like
YSA_02577	SSF46934	UBA-like
YSA_02577	SSF54713	Elongation factor Ts (EF-Ts), dimerisation domain
YSA_02581	SSF52313	Ribosomal protein S2
YSA_02584	SSF55920	Creatinase/aminopeptidase
YSA_02587	SSF109604	HD-domain/PDEase-like
YSA_02587	SSF55021	ACT-like
YSA_02587	SSF81301	Nucleotidyltransferase
YSA_02587	SSF81593	Nucleotidyltransferase substrate binding subunit/domain
YSA_02589	SSF53383	PLP-dependent transferases
YSA_02592	SSF52833	Thioredoxin-like
YSA_02594	SSF51161	Trimeric LpxA-like enzymes
YSA_02595	SSF53383	PLP-dependent transferases
YSA_02597	SSF82649	SufE/NifU
YSA_02599	SSF69572	Activating enzymes of the ubiquitin-like proteins
YSA_02602	SSF51445	(Trans)glycosidases
YSA_02602	SSF53448	Nucleotide-diphospho-sugar transferases
YSA_02604	SSF53187	Zn-dependent exopeptidases
YSA_02604	SSF55031	Bacterial exopeptidase dimerisation domain
YSA_02606	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
YSA_02608	SSF50249	Nucleic acid-binding proteins
YSA_02612	SSF69593	Glycerol-3-phosphate (1)-acyltransferase
YSA_02620	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
YSA_02620	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
YSA_02620	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
YSA_02622	SSF111369	HlyD-like secretion proteins
YSA_02623	SSF46689	Homeodomain-like
YSA_02623	SSF48498	Tetracyclin repressor-like, C-terminal domain
YSA_02624	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
YSA_02630	SSF51621	Phosphoenolpyruvate/pyruvate domain
YSA_02631	SSF117396	TM1631-like
YSA_02634	SSF53067	Actin-like ATPase domain
YSA_02638	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_02639	SSF51621	Phosphoenolpyruvate/pyruvate domain
YSA_02644	SSF103088	OmpA-like
YSA_02647	SSF53474	alpha/beta-Hydrolases
YSA_02653	SSF46689	Homeodomain-like
YSA_02655	SSF50249	Nucleic acid-binding proteins
YSA_02655	SSF55681	Class II aaRS and biotin synthetases
YSA_02657	SSF75620	Release factor
YSA_02659	SSF52172	CheY-like
YSA_02659	SSF55073	Nucleotide cyclase
YSA_02662	SSF52172	CheY-like
YSA_02662	SSF52738	Methylesterase CheB, C-terminal domain
YSA_02664	SSF47226	Histidine-containing phosphotransfer domain, HPT domain
YSA_02664	SSF50341	CheW-like
YSA_02664	SSF52172	CheY-like
YSA_02664	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
YSA_02665	SSF50341	CheW-like
YSA_02668	SSF47757	Chemotaxis receptor methyltransferase CheR, N-terminal domain
YSA_02668	SSF48452	TPR-like
YSA_02668	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
YSA_02670	SSF50341	CheW-like
YSA_02672	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
YSA_02675	SSF158682	TerB-like
YSA_02679	SSF53850	Periplasmic binding protein-like II
YSA_02681	SSF50331	MOP-like
YSA_02681	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_02682	SSF161098	MetI-like
YSA_02684	SSF161098	MetI-like
YSA_02685	SSF53720	ALDH-like
YSA_02690	SSF143100	TTHA1013/TTHA0281-like
YSA_02690	SSF47598	Ribbon-helix-helix
YSA_02692	SSF51395	FMN-linked oxidoreductases
YSA_02694	SSF64182	DHH phosphoesterases
YSA_02695	SSF52980	Restriction endonuclease-like
YSA_02697	SSF89796	CoA-transferase family III (CaiB/BaiF)
YSA_02699	SSF53850	Periplasmic binding protein-like II
YSA_02707	SSF53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes
YSA_02709	SSF51735	NAD(P)-binding Rossmann-fold domains
YSA_02709	SSF55021	ACT-like
YSA_02709	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
YSA_02710	SSF52833	Thioredoxin-like
YSA_02710	SSF54423	DsbC/DsbG N-terminal domain-like
YSA_02711	SSF56349	DNA breaking-rejoining enzymes
YSA_02714	SSF51735	NAD(P)-binding Rossmann-fold domains
YSA_02715	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
YSA_02717	SSF50104	Translation proteins SH3-like domain
YSA_02719	SSF75217	alpha/beta knot
YSA_02721	SSF50346	PRC-barrel domain
YSA_02721	SSF50447	Translation proteins
YSA_02723	SSF54565	Ribosomal protein S16
YSA_02724	SSF47446	Signal peptide-binding domain
YSA_02724	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_02727	SSF54631	CBS-domain pair
YSA_02727	SSF56176	FAD-binding/transporter-associated domain-like
YSA_02728	SSF103473	MFS general substrate transporter
YSA_02730	SSF51246	Rudiment single hybrid motif
YSA_02730	SSF52440	PreATP-grasp domain
YSA_02730	SSF56059	Glutathione synthetase ATP-binding domain-like
YSA_02734	SSF51161	Trimeric LpxA-like enzymes
YSA_02736	SSF55811	Nudix
YSA_02737	SSF55811	Nudix
YSA_02738	SSF141523	L,D-transpeptidase catalytic domain-like
YSA_02743	SSF51126	Pectin lyase-like
YSA_02750	SSF56935	Porins
YSA_02756	SSF50998	Quinoprotein alcohol dehydrogenase-like
YSA_02760	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_02760	SSF54211	Ribosomal protein S5 domain 2-like
YSA_02760	SSF88697	PUA domain-like
YSA_02762	SSF141066	ICP-like
YSA_02764	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
YSA_02767	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
YSA_02770	SSF52172	CheY-like
YSA_02772	SSF158472	HAMP domain-like
YSA_02772	SSF47384	Homodimeric domain of signal transducing histidine kinase
YSA_02772	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
YSA_02774	SSF63892	Pyridoxine 5'-phosphate synthase
YSA_02776	SSF50249	Nucleic acid-binding proteins
YSA_02776	SSF57863	ArfGap/RecO-like zinc finger
YSA_02777	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_02777	SSF54814	Prokaryotic type KH domain (KH-domain type II)
YSA_02779	SSF54768	dsRNA-binding domain-like
YSA_02779	SSF69065	RNase III domain-like
YSA_02784	SSF51306	LexA/Signal peptidase
YSA_02785	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_02785	SSF54980	EF-G C-terminal domain-like
YSA_02789	SSF50156	PDZ domain-like
YSA_02789	SSF50494	Trypsin-like serine proteases
YSA_02793	SSF89069	N-terminal, cytoplasmic domain of anti-sigmaE factor RseA
YSA_02795	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
YSA_02795	SSF88946	Sigma2 domain of RNA polymerase sigma factors
YSA_02798	SSF46977	Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain
YSA_02798	SSF51905	FAD/NAD(P)-binding domain
YSA_02798	SSF56425	Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain
YSA_02801	SSF109910	YgfY-like
YSA_02802	SSF101790	Aminomethyltransferase beta-barrel domain
YSA_02802	SSF103025	Folate-binding domain
YSA_02804	SSF109604	HD-domain/PDEase-like
YSA_02805	SSF47384	Homodimeric domain of signal transducing histidine kinase
YSA_02805	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
YSA_02807	SSF52172	CheY-like
YSA_02811	SSF53850	Periplasmic binding protein-like II
YSA_02819	SSF55816	5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain
YSA_02819	SSF56300	Metallo-dependent phosphatases
YSA_02821	SSF52141	Uracil-DNA glycosylase-like
YSA_02822	SSF52096	ClpP/crotonase
YSA_02824	SSF55073	Nucleotide cyclase
YSA_02827	SSF55120	Pseudouridine synthase
YSA_02827	SSF55174	Alpha-L RNA-binding motif
YSA_02828	SSF53474	alpha/beta-Hydrolases
YSA_02832	SSF52091	SpoIIaa-like
YSA_02838	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
YSA_02842	SSF51445	(Trans)glycosidases
YSA_02842	SSF52279	Beta-D-glucan exohydrolase, C-terminal domain
YSA_02845	SSF103190	Sensory domain-like
YSA_02845	SSF47384	Homodimeric domain of signal transducing histidine kinase
YSA_02845	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
YSA_02847	SSF46689	Homeodomain-like
YSA_02847	SSF52172	CheY-like
YSA_02847	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_02849	SSF103473	MFS general substrate transporter
YSA_02858	SSF50475	FMN-binding split barrel
YSA_02863	SSF54909	Dimeric alpha+beta barrel
YSA_02865	SSF46689	Homeodomain-like
YSA_02867	SSF52467	DHS-like NAD/FAD-binding domain
YSA_02867	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
YSA_02870	SSF46785	"Winged helix" DNA-binding domain
YSA_02870	SSF53850	Periplasmic binding protein-like II
YSA_02874	SSF51735	NAD(P)-binding Rossmann-fold domains
YSA_02875	SSF46785	"Winged helix" DNA-binding domain
YSA_02875	SSF53850	Periplasmic binding protein-like II
YSA_02878	SSF51621	Phosphoenolpyruvate/pyruvate domain
YSA_02881	SSF103473	MFS general substrate transporter
YSA_02882	SSF46689	Homeodomain-like
YSA_02882	SSF48498	Tetracyclin repressor-like, C-terminal domain
YSA_02885	SSF111369	HlyD-like secretion proteins
YSA_02888	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
YSA_02888	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
YSA_02888	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
YSA_02890	SSF56954	Outer membrane efflux proteins (OEP)
YSA_02898	SSF69118	AhpD-like
YSA_02899	SSF53474	alpha/beta-Hydrolases
YSA_02900	SSF48557	L-aspartase-like
YSA_02902	SSF103473	MFS general substrate transporter
YSA_02904	SSF53901	Thiolase-like
YSA_02905	SSF103473	MFS general substrate transporter
YSA_02907	SSF46785	"Winged helix" DNA-binding domain
YSA_02907	SSF55781	GAF domain-like
YSA_02919	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_02920	SSF103190	Sensory domain-like
YSA_02920	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
YSA_02924	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
YSA_02926	SSF88713	Glycoside hydrolase/deacetylase
YSA_02930	SSF53328	Formyltransferase
YSA_02930	SSF55021	ACT-like
YSA_02934	SSF53098	Ribonuclease H-like
YSA_02937	SSF48452	TPR-like
YSA_02938	SSF50800	PK beta-barrel domain-like
YSA_02938	SSF51621	Phosphoenolpyruvate/pyruvate domain
YSA_02938	SSF52935	PK C-terminal domain-like
YSA_02940	SSF48592	GroEL equatorial domain-like
YSA_02940	SSF52029	GroEL apical domain-like
YSA_02940	SSF54849	GroEL-intermediate domain like
YSA_02943	SSF50129	GroES-like
YSA_02946	SSF50475	FMN-binding split barrel
YSA_02948	SSF46767	Methylated DNA-protein cysteine methyltransferase, C-terminal domain
YSA_02951	SSF103473	MFS general substrate transporter
YSA_02953	SSF103473	MFS general substrate transporter
YSA_02956	SSF50182	Sm-like ribonucleoproteins
YSA_02956	SSF82689	Mechanosensitive channel protein MscS (YggB), C-terminal domain
YSA_02956	SSF82861	Mechanosensitive channel protein MscS (YggB), transmembrane region
YSA_02958	SSF89963	YajQ-like
YSA_02960	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
YSA_02960	SSF51735	NAD(P)-binding Rossmann-fold domains
YSA_02963	SSF158472	HAMP domain-like
YSA_02963	SSF47384	Homodimeric domain of signal transducing histidine kinase
YSA_02963	SSF55785	PYP-like sensor domain (PAS domain)
YSA_02963	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
YSA_02964	SSF89028	Cobalamin adenosyltransferase-like
YSA_02965	SSF51391	Thiamin phosphate synthase
YSA_02965	SSF55811	Nudix
YSA_02967	SSF47616	GST C-terminal domain-like
YSA_02967	SSF52833	Thioredoxin-like
YSA_02970	SSF56266	DmpA/ArgJ-like
YSA_02972	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_02972	SSF81767	Pre-protein crosslinking domain of SecA
YSA_02972	SSF81886	Helical scaffold and wing domains of SecA
YSA_02976	SSF54211	Ribosomal protein S5 domain 2-like
YSA_02980	SSF52490	Tubulin nucleotide-binding domain-like
YSA_02980	SSF55307	Tubulin C-terminal domain-like
YSA_02983	SSF53067	Actin-like ATPase domain
YSA_02986	SSF52440	PreATP-grasp domain
YSA_02986	SSF56059	Glutathione synthetase ATP-binding domain-like
YSA_02988	SSF51984	MurCD N-terminal domain
YSA_02988	SSF53244	MurD-like peptide ligases, peptide-binding domain
YSA_02988	SSF53623	MurD-like peptide ligases, catalytic domain
YSA_02990	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
YSA_02993	SSF51984	MurCD N-terminal domain
YSA_02993	SSF53244	MurD-like peptide ligases, peptide-binding domain
YSA_02993	SSF53623	MurD-like peptide ligases, catalytic domain
YSA_02996	SSF53244	MurD-like peptide ligases, peptide-binding domain
YSA_02996	SSF53623	MurD-like peptide ligases, catalytic domain
YSA_02996	SSF63418	MurE/MurF N-terminal domain
YSA_02998	SSF53244	MurD-like peptide ligases, peptide-binding domain
YSA_02998	SSF53623	MurD-like peptide ligases, catalytic domain
YSA_02998	SSF63418	MurE/MurF N-terminal domain
YSA_02999	SSF56519	Penicillin binding protein dimerisation domain
YSA_02999	SSF56601	beta-lactamase/transpeptidase-like
YSA_03003	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
YSA_03003	SSF81799	Putative methyltransferase TM0872, insert domain
YSA_03005	SSF89447	AbrB/MazE/MraZ-like
YSA_03008	SSF53790	Tetrapyrrole methylase
YSA_03012	SSF53822	Periplasmic binding protein-like I
YSA_03014	SSF52980	Restriction endonuclease-like
YSA_03017	SSF53697	SIS domain
YSA_03020	SSF101738	SspB-like
YSA_03022	SSF47616	GST C-terminal domain-like
YSA_03022	SSF52833	Thioredoxin-like
YSA_03023	SSF46626	Cytochrome c
YSA_03025	SSF81342	Transmembrane di-heme cytochromes
YSA_03025	SSF81648	a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
YSA_03027	SSF50022	ISP domain
YSA_03028	SSF54211	Ribosomal protein S5 domain 2-like
YSA_03030	SSF52161	Ribosomal protein L13
YSA_03033	SSF51430	NAD(P)-linked oxidoreductase
YSA_03036	SSF46689	Homeodomain-like
YSA_03036	SSF52317	Class I glutamine amidotransferase-like
YSA_03037	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_03038	SSF160113	YegP-like
YSA_03038	SSF52374	Nucleotidylyl transferase
YSA_03040	SSF53474	alpha/beta-Hydrolases
YSA_03044	SSF53383	PLP-dependent transferases
YSA_03046	SSF46785	"Winged helix" DNA-binding domain
YSA_03046	SSF54909	Dimeric alpha+beta barrel
YSA_03052	SSF54060	His-Me finger endonucleases
YSA_03052	SSF69369	Cloacin translocation domain
YSA_03054	SSF47345	Colicin E immunity proteins
YSA_03056	SSF50447	Translation proteins
YSA_03056	SSF50465	EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
YSA_03056	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_03057	SSF52402	Adenine nucleotide alpha hydrolases-like
YSA_03059	SSF102705	NIF3 (NGG1p interacting factor 3)-like
YSA_03061	SSF50156	PDZ domain-like
YSA_03061	SSF50494	Trypsin-like serine proteases
YSA_03063	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_03064	SSF161098	MetI-like
YSA_03067	SSF161098	MetI-like
YSA_03068	SSF53850	Periplasmic binding protein-like II
YSA_03073	SSF53474	alpha/beta-Hydrolases
YSA_03075	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_03077	SSF54690	Molybdopterin synthase subunit MoaE
YSA_03079	SSF54285	MoaD/ThiS
YSA_03080	SSF55040	Molybdenum cofactor biosynthesis protein C, MoaC
YSA_03083	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_03083	SSF88723	PIN domain-like
YSA_03085	SSF88713	Glycoside hydrolase/deacetylase
YSA_03091	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
YSA_03091	SSF51735	NAD(P)-binding Rossmann-fold domains
YSA_03091	SSF52413	UDP-glucose/GDP-mannose dehydrogenase C-terminal domain
YSA_03094	SSF53448	Nucleotide-diphospho-sugar transferases
YSA_03096	SSF141371	PilZ domain-like
YSA_03099	SSF81901	HCP-like
YSA_03103	SSF51126	Pectin lyase-like
YSA_03107	SSF48230	Chondroitin AC/alginate lyase
YSA_03110	SSF52266	SGNH hydrolase
YSA_03114	SSF51182	RmlC-like cupins
YSA_03114	SSF53448	Nucleotide-diphospho-sugar transferases
YSA_03120	SSF51735	NAD(P)-binding Rossmann-fold domains
YSA_03122	SSF56954	Outer membrane efflux proteins (OEP)
YSA_03124	SSF111369	HlyD-like secretion proteins
YSA_03128	SSF103473	MFS general substrate transporter
YSA_03130	SSF46785	"Winged helix" DNA-binding domain
YSA_03130	SSF53850	Periplasmic binding protein-like II
YSA_03133	SSF52402	Adenine nucleotide alpha hydrolases-like
YSA_03134	SSF111369	HlyD-like secretion proteins
YSA_03141	SSF56954	Outer membrane efflux proteins (OEP)
YSA_03143	SSF46785	"Winged helix" DNA-binding domain
YSA_03143	SSF53850	Periplasmic binding protein-like II
YSA_03145	SSF51735	NAD(P)-binding Rossmann-fold domains
YSA_03145	SSF52283	Formate/glycerate dehydrogenase catalytic domain-like
YSA_03146	SSF103481	Multidrug resistance efflux transporter EmrE
YSA_03149	SSF46689	Homeodomain-like
YSA_03151	SSF56935	Porins
YSA_03153	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
YSA_03153	SSF88946	Sigma2 domain of RNA polymerase sigma factors
YSA_03159	SSF69754	Ribosome binding protein Y (YfiA homologue)
YSA_03174	SSF51735	NAD(P)-binding Rossmann-fold domains
YSA_03174	SSF53223	Aminoacid dehydrogenase-like, N-terminal domain
YSA_03176	SSF47616	GST C-terminal domain-like
YSA_03176	SSF52833	Thioredoxin-like
YSA_03177	SSF56529	FAH
YSA_03177	SSF63433	Fumarylacetoacetate hydrolase, FAH, N-terminal domain
YSA_03179	SSF51182	RmlC-like cupins
YSA_03185	SSF53474	alpha/beta-Hydrolases
YSA_03189	SSF46785	"Winged helix" DNA-binding domain
YSA_03189	SSF53850	Periplasmic binding protein-like II
YSA_03190	SSF52218	Flavoproteins
YSA_03191	SSF55785	PYP-like sensor domain (PAS domain)
YSA_03194	SSF46955	Putative DNA-binding domain
YSA_03197	SSF54909	Dimeric alpha+beta barrel
YSA_03200	SSF51735	NAD(P)-binding Rossmann-fold domains
YSA_03201	SSF158757	SMc04008-like
YSA_03205	SSF53474	alpha/beta-Hydrolases
YSA_03210	SSF53901	Thiolase-like
YSA_03213	SSF51726	UROD/MetE-like
YSA_03218	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_03218	SSF90002	Hypothetical protein YjiA, C-terminal domain
YSA_03224	SSF141371	PilZ domain-like
YSA_03227	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_03227	SSF54211	Ribosomal protein S5 domain 2-like
YSA_03229	SSF81330	Gated mechanosensitive channel
YSA_03231	SSF52343	Ferredoxin reductase-like, C-terminal NADP-linked domain
YSA_03231	SSF63380	Riboflavin synthase domain-like
YSA_03233	SSF46894	C-terminal effector domain of the bipartite response regulators
YSA_03233	SSF75516	Pheromone-binding domain of LuxR-like quorum-sensing transcription factors
YSA_03235	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
YSA_03241	SSF103473	MFS general substrate transporter
YSA_03243	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
YSA_03245	SSF49482	Aromatic compound dioxygenase
YSA_03247	SSF49482	Aromatic compound dioxygenase
YSA_03252	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
YSA_03253	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
YSA_03255	SSF46785	"Winged helix" DNA-binding domain
YSA_03255	SSF53850	Periplasmic binding protein-like II
YSA_03257	SSF52218	Flavoproteins
YSA_03258	SSF54909	Dimeric alpha+beta barrel
YSA_03261	SSF46785	"Winged helix" DNA-binding domain
YSA_03261	SSF53850	Periplasmic binding protein-like II
YSA_03266	SSF161111	Cation efflux protein transmembrane domain-like
YSA_03267	SSF51182	RmlC-like cupins
YSA_03269	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
YSA_03269	SSF51735	NAD(P)-binding Rossmann-fold domains
YSA_03271	SSF53720	ALDH-like
YSA_03272	SSF46785	"Winged helix" DNA-binding domain
YSA_03272	SSF53850	Periplasmic binding protein-like II
YSA_03275	SSF103088	OmpA-like
YSA_03277	SSF55073	Nucleotide cyclase
YSA_03281	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_03282	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_03282	SSF52980	Restriction endonuclease-like
YSA_03285	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_03285	SSF52980	Restriction endonuclease-like
YSA_03304	SSF56524	Oxidoreductase molybdopterin-binding domain
YSA_03307	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
YSA_03307	SSF51735	NAD(P)-binding Rossmann-fold domains
YSA_03309	SSF55021	ACT-like
YSA_03312	SSF52467	DHS-like NAD/FAD-binding domain
YSA_03312	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
YSA_03316	SSF158452	YqcC-like
YSA_03319	SSF48452	TPR-like
YSA_03321	SSF53955	Lysozyme-like
YSA_03321	SSF56601	beta-lactamase/transpeptidase-like
YSA_03323	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_03323	SSF56112	Protein kinase-like (PK-like)
YSA_03328	SSF159501	EreA/ChaN-like
YSA_03331	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_03332	SSF81345	ABC transporter involved in vitamin B12 uptake, BtuC
YSA_03333	SSF53807	"Helical backbone" metal receptor
YSA_03339	SSF53383	PLP-dependent transferases
YSA_03341	SSF109635	DnaK suppressor protein DksA, alpha-hairpin domain
YSA_03341	SSF57716	Glucocorticoid receptor-like (DNA-binding domain)
YSA_03343	SSF52374	Nucleotidylyl transferase
YSA_03348	SSF47384	Homodimeric domain of signal transducing histidine kinase
YSA_03348	SSF55785	PYP-like sensor domain (PAS domain)
YSA_03348	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
YSA_03350	SSF52172	CheY-like
YSA_03350	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_03355	SSF81301	Nucleotidyltransferase
YSA_03355	SSF81891	Poly A polymerase C-terminal region-like
YSA_03356	SSF55083	6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK
YSA_03359	SSF51621	Phosphoenolpyruvate/pyruvate domain
YSA_03361	SSF52374	Nucleotidylyl transferase
YSA_03363	SSF53697	SIS domain
YSA_03364	SSF56801	Acetyl-CoA synthetase-like
YSA_03368	SSF103088	OmpA-like
YSA_03370	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
YSA_03372	SSF54909	Dimeric alpha+beta barrel
YSA_03377	SSF50249	Nucleic acid-binding proteins
YSA_03377	SSF54211	Ribosomal protein S5 domain 2-like
YSA_03377	SSF54791	Eukaryotic type KH-domain (KH-domain type I)
YSA_03377	SSF55666	Ribonuclease PH domain 2-like
YSA_03380	SSF47060	S15/NS1 RNA-binding domain
YSA_03382	SSF55120	Pseudouridine synthase
YSA_03382	SSF88697	PUA domain-like
YSA_03384	SSF89919	Ribosome-binding factor A, RbfA
YSA_03385	SSF46955	Putative DNA-binding domain
YSA_03385	SSF50447	Translation proteins
YSA_03385	SSF52156	Initiation factor IF2/eIF5b, domain 3
YSA_03385	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_03388	SSF47794	Rad51 N-terminal domain-like
YSA_03388	SSF50249	Nucleic acid-binding proteins
YSA_03388	SSF54814	Prokaryotic type KH domain (KH-domain type II)
YSA_03388	SSF69705	Transcription factor NusA, N-terminal domain
YSA_03391	SSF74942	YhbC-like, C-terminal domain
YSA_03391	SSF75420	YhbC-like, N-terminal domain
YSA_03395	SSF51351	Triosephosphate isomerase (TIM)
YSA_03398	SSF53738	Phosphoglucomutase, first 3 domains
YSA_03398	SSF55957	Phosphoglucomutase, C-terminal domain
YSA_03401	SSF51717	Dihydropteroate synthetase-like
YSA_03402	SSF140990	FtsH protease domain-like
YSA_03402	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_03404	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
YSA_03405	SSF75471	YhbY-like
YSA_03407	SSF46557	GreA transcript cleavage protein, N-terminal domain
YSA_03407	SSF54534	FKBP-like
YSA_03410	SSF48108	Carbamoyl phosphate synthetase, large subunit connection domain
YSA_03410	SSF52335	Methylglyoxal synthase-like
YSA_03410	SSF52440	PreATP-grasp domain
YSA_03410	SSF56059	Glutathione synthetase ATP-binding domain-like
YSA_03414	SSF52021	Carbamoyl phosphate synthetase, small subunit N-terminal domain
YSA_03414	SSF52317	Class I glutamine amidotransferase-like
YSA_03417	SSF51735	NAD(P)-binding Rossmann-fold domains
YSA_03417	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
YSA_03420	SSF46565	Chaperone J-domain
YSA_03420	SSF49493	HSP40/DnaJ peptide-binding domain
YSA_03420	SSF57938	DnaJ/Hsp40 cysteine-rich domain
YSA_03423	SSF100920	Heat shock protein 70kD (HSP70), peptide-binding domain
YSA_03423	SSF100934	Heat shock protein 70kD (HSP70), C-terminal subdomain
YSA_03423	SSF53067	Actin-like ATPase domain
YSA_03425	SSF51064	Head domain of nucleotide exchange factor GrpE
YSA_03425	SSF58014	Coiled-coil domain of nucleotide exchange factor GrpE
YSA_03429	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_03430	SSF46785	"Winged helix" DNA-binding domain
YSA_03432	SSF55961	Bet v1-like
YSA_03433	SSF74982	Small protein B (SmpB)
YSA_03435	SSF46785	"Winged helix" DNA-binding domain
YSA_03435	SSF48008	GntR ligand-binding domain-like
YSA_03439	SSF51395	FMN-linked oxidoreductases
YSA_03442	SSF46548	alpha-helical ferredoxin
YSA_03442	SSF55103	FAD-linked oxidases, C-terminal domain
YSA_03442	SSF56176	FAD-binding/transporter-associated domain-like
YSA_03449	SSF56349	DNA breaking-rejoining enzymes
YSA_03453	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_03453	SSF52980	Restriction endonuclease-like
YSA_03453	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
YSA_03456	SSF46955	Putative DNA-binding domain
YSA_03459	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_03464	SSF46689	Homeodomain-like
YSA_03464	SSF53041	Resolvase-like
YSA_03469	SSF46955	Putative DNA-binding domain
YSA_03473	SSF55008	HMA, heavy metal-associated domain
YSA_03475	SSF51905	FAD/NAD(P)-binding domain
YSA_03475	SSF55008	HMA, heavy metal-associated domain
YSA_03475	SSF55424	FAD/NAD-linked reductases, dimerisation (C-terminal) domain
YSA_03476	SSF46955	Putative DNA-binding domain
YSA_03479	SSF46689	Homeodomain-like
YSA_03479	SSF53041	Resolvase-like
YSA_03485	SSF53383	PLP-dependent transferases
YSA_03487	SSF54909	Dimeric alpha+beta barrel
YSA_03493	SSF46689	Homeodomain-like
YSA_03493	SSF53041	Resolvase-like
YSA_03497	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_03499	SSF53098	Ribonuclease H-like
YSA_03522	SSF141868	EAL domain-like
YSA_03522	SSF55073	Nucleotide cyclase
YSA_03522	SSF55785	PYP-like sensor domain (PAS domain)
YSA_03523	SSF55785	PYP-like sensor domain (PAS domain)
YSA_03523	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
YSA_03532	SSF56349	DNA breaking-rejoining enzymes
YSA_03544	SSF56349	DNA breaking-rejoining enzymes
YSA_03552	SSF116734	DNA methylase specificity domain
YSA_03553	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
YSA_03558	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_03565	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_03570	SSF103088	OmpA-like
YSA_03582	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_03595	SSF56935	Porins
YSA_03613	SSF103473	MFS general substrate transporter
YSA_03614	SSF51735	NAD(P)-binding Rossmann-fold domains
YSA_03614	SSF52283	Formate/glycerate dehydrogenase catalytic domain-like
YSA_03617	SSF46785	"Winged helix" DNA-binding domain
YSA_03617	SSF53850	Periplasmic binding protein-like II
YSA_03618	SSF51604	Enolase C-terminal domain-like
YSA_03618	SSF54826	Enolase N-terminal domain-like
YSA_03619	SSF103473	MFS general substrate transporter
YSA_03622	SSF46785	"Winged helix" DNA-binding domain
YSA_03622	SSF48008	GntR ligand-binding domain-like
YSA_03623	SSF50129	GroES-like
YSA_03623	SSF51735	NAD(P)-binding Rossmann-fold domains
YSA_03625	SSF56784	HAD-like
YSA_03626	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
YSA_03628	SSF55729	Acyl-CoA N-acyltransferases (Nat)
YSA_03631	SSF53254	Phosphoglycerate mutase-like
YSA_03633	SSF52768	Arginase/deacetylase
YSA_03635	SSF160996	HI0933 insert domain-like
YSA_03635	SSF51905	FAD/NAD(P)-binding domain
YSA_03637	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_03640	SSF103481	Multidrug resistance efflux transporter EmrE
YSA_03642	SSF53098	Ribonuclease H-like
YSA_03655	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_03658	SSF160240	Cation efflux protein cytoplasmic domain-like
YSA_03658	SSF161111	Cation efflux protein transmembrane domain-like
YSA_03664	SSF46785	"Winged helix" DNA-binding domain
YSA_03664	SSF54909	Dimeric alpha+beta barrel
YSA_03668	SSF55120	Pseudouridine synthase
YSA_03670	SSF53167	Purine and uridine phosphorylases
YSA_03673	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
YSA_03673	SSF56645	Acyl-CoA dehydrogenase NM domain-like
YSA_03675	SSF47384	Homodimeric domain of signal transducing histidine kinase
YSA_03675	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
YSA_03676	SSF53613	Ribokinase-like
YSA_03678	SSF51391	Thiamin phosphate synthase
YSA_03680	SSF53383	PLP-dependent transferases
YSA_03682	SSF81901	HCP-like
YSA_03687	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_03689	SSF55486	Metalloproteases ("zincins"), catalytic domain
YSA_03690	SSF54631	CBS-domain pair
YSA_03690	SSF56176	FAD-binding/transporter-associated domain-like
YSA_03691	SSF56317	Carbon-nitrogen hydrolase
YSA_03698	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
YSA_03698	SSF50677	ValRS/IleRS/LeuRS editing domain
YSA_03698	SSF52374	Nucleotidylyl transferase
YSA_03701	SSF48019	post-AAA+ oligomerization domain-like
YSA_03701	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_03706	SSF47090	PGBD-like
YSA_03706	SSF53955	Lysozyme-like
YSA_03707	SSF141986	LD-carboxypeptidase A C-terminal domain-like
YSA_03707	SSF52317	Class I glutamine amidotransferase-like
YSA_03710	SSF102114	Radical SAM enzymes
YSA_03712	SSF55681	Class II aaRS and biotin synthetases
YSA_03714	SSF117991	YbeD/HP0495-like
YSA_03717	SSF56601	beta-lactamase/transpeptidase-like
YSA_03717	SSF69189	Penicillin-binding protein associated domain
YSA_03719	SSF110997	Sporulation related repeat
YSA_03719	SSF50685	Barwin-like endoglucanases
YSA_03721	SSF53955	Lysozyme-like
YSA_03725	SSF56519	Penicillin binding protein dimerisation domain
YSA_03725	SSF56601	beta-lactamase/transpeptidase-like
YSA_03726	SSF75217	alpha/beta knot
YSA_03727	SSF81301	Nucleotidyltransferase
YSA_03728	SSF52374	Nucleotidylyl transferase
YSA_03730	SSF53720	ALDH-like
YSA_03733	SSF50486	FMT C-terminal domain-like
YSA_03735	SSF48317	Acid phosphatase/Vanadium-dependent haloperoxidase
YSA_03737	SSF88697	PUA domain-like
YSA_03745	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
YSA_03747	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
YSA_03751	SSF51395	FMN-linked oxidoreductases
YSA_03752	SSF46689	Homeodomain-like
YSA_03754	SSF52335	Methylglyoxal synthase-like
YSA_03754	SSF53927	Cytidine deaminase-like
YSA_03755	SSF51246	Rudiment single hybrid motif
YSA_03755	SSF52440	PreATP-grasp domain
YSA_03755	SSF56059	Glutathione synthetase ATP-binding domain-like
YSA_03758	SSF47384	Homodimeric domain of signal transducing histidine kinase
YSA_03758	SSF52172	CheY-like
YSA_03758	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
YSA_03767	SSF159672	CbiG N-terminal domain-like
YSA_03767	SSF53790	Tetrapyrrole methylase
YSA_03769	SSF53790	Tetrapyrrole methylase
YSA_03770	SSF63965	Precorrin-8X methylmutase CbiC/CobH
YSA_03772	SSF55124	Nitrite/Sulfite reductase N-terminal domain-like
YSA_03772	SSF56014	Nitrite and sulphite reductase 4Fe-4S domain-like
YSA_03776	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
YSA_03776	SSF53790	Tetrapyrrole methylase
YSA_03778	SSF111342	CbiD-like
YSA_03781	SSF141322	NfeD domain-like
YSA_03784	SSF117892	Band 7/SPFH domain
YSA_03788	SSF110087	DR1885-like metal-binding protein
YSA_03794	SSF56935	Porins
YSA_03801	SSF53822	Periplasmic binding protein-like I
YSA_03802	SSF48371	ARM repeat
YSA_03805	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_03807	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_03809	SSF55729	Acyl-CoA N-acyltransferases (Nat)
YSA_03814	SSF46565	Chaperone J-domain
YSA_03814	SSF49493	HSP40/DnaJ peptide-binding domain
YSA_03815	SSF53067	Actin-like ATPase domain
YSA_03819	SSF46689	Homeodomain-like
YSA_03819	SSF51182	RmlC-like cupins
YSA_03821	SSF103481	Multidrug resistance efflux transporter EmrE
YSA_03822	SSF53474	alpha/beta-Hydrolases
YSA_03823	SSF53474	alpha/beta-Hydrolases
YSA_03826	SSF47240	Ferritin-like
YSA_03832	SSF46689	Homeodomain-like
YSA_03835	SSF48208	Six-hairpin glycosidases
YSA_03837	SSF51735	NAD(P)-binding Rossmann-fold domains
YSA_03842	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_03843	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_03849	SSF53822	Periplasmic binding protein-like I
YSA_03852	SSF51690	Nicotinate/Quinolinate PRTase C-terminal domain-like
YSA_03852	SSF54675	Nicotinate/Quinolinate PRTase N-terminal domain-like
YSA_03854	SSF52402	Adenine nucleotide alpha hydrolases-like
YSA_03856	SSF49503	Cupredoxins
YSA_03859	SSF102405	MCP/YpsA-like
YSA_03862	SSF102114	Radical SAM enzymes
YSA_03863	SSF48024	N-terminal domain of DnaB helicase
YSA_03863	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_03865	SSF55653	Ribosomal protein L9 C-domain
YSA_03865	SSF55658	L9 N-domain-like
YSA_03868	SSF46911	Ribosomal protein S18
YSA_03870	SSF54995	Ribosomal protein S6
YSA_03872	SSF55315	L30e-like
YSA_03872	SSF75217	alpha/beta knot
YSA_03875	SSF50249	Nucleic acid-binding proteins
YSA_03880	SSF53850	Periplasmic binding protein-like II
YSA_03882	SSF161098	MetI-like
YSA_03887	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
YSA_03888	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_03890	SSF55681	Class II aaRS and biotin synthetases
YSA_03894	SSF117892	Band 7/SPFH domain
YSA_03896	SSF117892	Band 7/SPFH domain
YSA_03898	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_03898	SSF54980	EF-G C-terminal domain-like
YSA_03900	SSF50182	Sm-like ribonucleoproteins
YSA_03901	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_03902	SSF118116	DNA mismatch repair protein MutL
YSA_03902	SSF54211	Ribosomal protein S5 domain 2-like
YSA_03902	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
YSA_03904	SSF53187	Zn-dependent exopeptidases
YSA_03904	SSF54106	LysM domain
YSA_03906	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_03907	SSF53613	Ribokinase-like
YSA_03909	SSF46548	alpha-helical ferredoxin
YSA_03911	SSF53098	Ribonuclease H-like
YSA_03914	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_03917	SSF103088	OmpA-like
YSA_03921	SSF109604	HD-domain/PDEase-like
YSA_03923	SSF52821	Rhodanese/Cell cycle control phosphatase
YSA_03927	SSF55021	ACT-like
YSA_03927	SSF56784	HAD-like
YSA_03931	SSF159594	XCC0632-like
YSA_03932	SSF101904	GyrA/ParC C-terminal domain-like
YSA_03932	SSF56719	Type II DNA topoisomerase
YSA_03934	SSF50630	Acid proteases
YSA_03936	SSF63825	YWTD domain
YSA_03937	SSF54211	Ribosomal protein S5 domain 2-like
YSA_03937	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
YSA_03937	SSF56719	Type II DNA topoisomerase
YSA_03940	SSF53474	alpha/beta-Hydrolases
YSA_03941	SSF56300	Metallo-dependent phosphatases
YSA_03944	SSF55811	Nudix
YSA_03951	SSF56954	Outer membrane efflux proteins (OEP)
YSA_03954	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
YSA_03955	SSF46785	"Winged helix" DNA-binding domain
YSA_03955	SSF53850	Periplasmic binding protein-like II
YSA_03956	SSF103481	Multidrug resistance efflux transporter EmrE
YSA_03957	SSF51905	FAD/NAD(P)-binding domain
YSA_03958	SSF51430	NAD(P)-linked oxidoreductase
YSA_03962	SSF52374	Nucleotidylyl transferase
YSA_03962	SSF53613	Ribokinase-like
YSA_03964	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_03964	SSF90123	ABC transporter transmembrane region
YSA_03969	SSF56112	Protein kinase-like (PK-like)
YSA_03970	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
YSA_03972	SSF53448	Nucleotide-diphospho-sugar transferases
YSA_03975	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
YSA_03976	SSF102588	LmbE-like
YSA_03978	SSF55729	Acyl-CoA N-acyltransferases (Nat)
YSA_03980	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
YSA_03983	SSF53067	Actin-like ATPase domain
YSA_03984	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
YSA_03990	SSF47598	Ribbon-helix-helix
YSA_03990	SSF51730	FAD-linked oxidoreductase
YSA_03990	SSF53720	ALDH-like
YSA_03990	SSF81935	N-terminal domain of bifunctional PutA protein
YSA_03995	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
YSA_03995	SSF56645	Acyl-CoA dehydrogenase NM domain-like
YSA_03997	SSF111283	Putative modulator of DNA gyrase, PmbA/TldD
YSA_03999	SSF111283	Putative modulator of DNA gyrase, PmbA/TldD
YSA_04001	SSF103473	MFS general substrate transporter
YSA_04002	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_04004	SSF160996	HI0933 insert domain-like
YSA_04004	SSF51905	FAD/NAD(P)-binding domain
YSA_04007	SSF53850	Periplasmic binding protein-like II
YSA_04010	SSF55729	Acyl-CoA N-acyltransferases (Nat)
YSA_04015	SSF141868	EAL domain-like
YSA_04015	SSF52172	CheY-like
YSA_04015	SSF55073	Nucleotide cyclase
YSA_04015	SSF55785	PYP-like sensor domain (PAS domain)
YSA_04016	SSF51569	Aldolase
YSA_04019	SSF141488	YdhA-like
YSA_04022	SSF53748	Phosphoglycerate kinase
YSA_04024	SSF51735	NAD(P)-binding Rossmann-fold domains
YSA_04024	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
YSA_04026	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
YSA_04026	SSF52922	TK C-terminal domain-like
YSA_04028	SSF46785	"Winged helix" DNA-binding domain
YSA_04028	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
YSA_04029	SSF55973	S-adenosylmethionine synthetase
YSA_04033	SSF47781	RuvA domain 2-like
YSA_04033	SSF50249	Nucleic acid-binding proteins
YSA_04033	SSF56091	DNA ligase/mRNA capping enzyme, catalytic domain
YSA_04037	SSF47175	Cytochromes
YSA_04040	SSF50685	Barwin-like endoglucanases
YSA_04042	SSF161084	MAPEG domain-like
YSA_04045	SSF103481	Multidrug resistance efflux transporter EmrE
YSA_04049	SSF53098	Ribonuclease H-like
YSA_04050	SSF46689	Homeodomain-like
YSA_04051	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
YSA_04052	SSF51735	NAD(P)-binding Rossmann-fold domains
YSA_04052	SSF52283	Formate/glycerate dehydrogenase catalytic domain-like
YSA_04054	SSF51730	FAD-linked oxidoreductase
YSA_04058	SSF53850	Periplasmic binding protein-like II
YSA_04061	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_04063	SSF101874	YceI-like
YSA_04065	SSF81342	Transmembrane di-heme cytochromes
YSA_04067	SSF51905	FAD/NAD(P)-binding domain
YSA_04067	SSF54373	FAD-linked reductases, C-terminal domain
YSA_04071	SSF53383	PLP-dependent transferases
YSA_04073	SSF75217	alpha/beta knot
YSA_04073	SSF88697	PUA domain-like
YSA_04076	SSF50341	CheW-like
YSA_04079	SSF47226	Histidine-containing phosphotransfer domain, HPT domain
YSA_04079	SSF50341	CheW-like
YSA_04079	SSF52172	CheY-like
YSA_04079	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
YSA_04081	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
YSA_04083	SSF50341	CheW-like
YSA_04085	SSF52172	CheY-like
YSA_04086	SSF52172	CheY-like
YSA_04088	SSF52440	PreATP-grasp domain
YSA_04088	SSF56059	Glutathione synthetase ATP-binding domain-like
YSA_04090	SSF74653	TolA/TonB C-terminal domain
YSA_04092	SSF143456	VC0467-like
YSA_04093	SSF53098	Ribonuclease H-like
YSA_04094	SSF53271	PRTase-like
YSA_04095	SSF53671	Aspartate/ornithine carbamoyltransferase
YSA_04097	SSF51338	Composite domain of metallo-dependent hydrolases
YSA_04097	SSF51556	Metallo-dependent hydrolases
YSA_04100	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
YSA_04102	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_04108	SSF53474	alpha/beta-Hydrolases
YSA_04109	SSF53474	alpha/beta-Hydrolases
YSA_04111	SSF53474	alpha/beta-Hydrolases
YSA_04112	SSF46689	Homeodomain-like
YSA_04121	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
YSA_04123	SSF55718	SCP-like
YSA_04126	SSF56112	Protein kinase-like (PK-like)
YSA_04127	SSF141734	HisI-like
YSA_04129	SSF101386	all-alpha NTP pyrophosphatases
YSA_04136	SSF75217	alpha/beta knot
YSA_04138	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
YSA_04140	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
YSA_04141	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_04142	SSF161098	MetI-like
YSA_04145	SSF53850	Periplasmic binding protein-like II
YSA_04148	SSF53448	Nucleotide-diphospho-sugar transferases
YSA_04151	SSF74650	Galactose mutarotase-like
YSA_04151	SSF81296	E set domains
YSA_04152	SSF69500	DTD-like
YSA_04153	SSF53474	alpha/beta-Hydrolases
YSA_04155	SSF53187	Zn-dependent exopeptidases
YSA_04157	SSF51338	Composite domain of metallo-dependent hydrolases
YSA_04157	SSF51556	Metallo-dependent hydrolases
YSA_04161	SSF48557	L-aspartase-like
YSA_04163	SSF111326	Urocanase
YSA_04168	SSF51182	RmlC-like cupins
YSA_04169	SSF46785	"Winged helix" DNA-binding domain
YSA_04169	SSF64288	Chorismate lyase-like
YSA_04170	SSF51338	Composite domain of metallo-dependent hydrolases
YSA_04170	SSF51556	Metallo-dependent hydrolases
YSA_04173	SSF50814	Lipocalins
YSA_04180	SSF48452	TPR-like
YSA_04183	SSF56655	Carbohydrate phosphatase
YSA_04184	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
YSA_04186	SSF53474	alpha/beta-Hydrolases
YSA_04190	SSF50447	Translation proteins
YSA_04190	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_04190	SSF54980	EF-G C-terminal domain-like
YSA_04191	SSF143437	THUMP domain-like
YSA_04191	SSF52402	Adenine nucleotide alpha hydrolases-like
YSA_04191	SSF52821	Rhodanese/Cell cycle control phosphatase
YSA_04193	SSF54368	Glutamine synthetase, N-terminal domain
YSA_04193	SSF55931	Glutamine synthetase/guanido kinase
YSA_04196	SSF48600	Chorismate mutase II
YSA_04198	SSF47384	Homodimeric domain of signal transducing histidine kinase
YSA_04198	SSF55785	PYP-like sensor domain (PAS domain)
YSA_04198	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
YSA_04199	SSF46689	Homeodomain-like
YSA_04199	SSF52172	CheY-like
YSA_04199	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_04206	SSF75217	alpha/beta knot
YSA_04207	SSF54611	SecB-like
YSA_04209	SSF52833	Thioredoxin-like
YSA_04211	SSF52821	Rhodanese/Cell cycle control phosphatase
YSA_04215	SSF53649	Alkaline phosphatase-like
YSA_04215	SSF64158	2,3-Bisphosphoglycerate-independent phosphoglycerate mutase, substrate-binding domain
YSA_04218	SSF51261	Duplicated hybrid motif
YSA_04220	SSF50156	PDZ domain-like
YSA_04220	SSF52096	ClpP/crotonase
YSA_04224	SSF88713	Glycoside hydrolase/deacetylase
YSA_04236	SSF46689	Homeodomain-like
YSA_04236	SSF48498	Tetracyclin repressor-like, C-terminal domain
YSA_04237	SSF53720	ALDH-like
YSA_04239	SSF51905	FAD/NAD(P)-binding domain
YSA_04239	SSF54373	FAD-linked reductases, C-terminal domain
YSA_04243	SSF56399	ADP-ribosylation
YSA_04244	SSF116726	TrkA C-terminal domain-like
YSA_04244	SSF56176	FAD-binding/transporter-associated domain-like
YSA_04246	SSF50182	Sm-like ribonucleoproteins
YSA_04246	SSF82689	Mechanosensitive channel protein MscS (YggB), C-terminal domain
YSA_04246	SSF82861	Mechanosensitive channel protein MscS (YggB), transmembrane region
YSA_04250	SSF52833	Thioredoxin-like
YSA_04251	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_04252	SSF46785	"Winged helix" DNA-binding domain
YSA_04252	SSF53850	Periplasmic binding protein-like II
YSA_04253	SSF103473	MFS general substrate transporter
YSA_04255	SSF101756	Hypothetical protein YgiW
YSA_04259	SSF53067	Actin-like ATPase domain
YSA_04260	SSF158544	GspK insert domain-like
YSA_04260	SSF54523	Pili subunits
YSA_04261	SSF54523	Pili subunits
YSA_04263	SSF54523	Pili subunits
YSA_04264	SSF54523	Pili subunits
YSA_04266	SSF54523	Pili subunits
YSA_04269	SSF160246	EspE N-terminal domain-like
YSA_04269	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_04273	SSF81342	Transmembrane di-heme cytochromes
YSA_04277	SSF81296	E set domains
YSA_04278	SSF51726	UROD/MetE-like
YSA_04280	SSF46548	alpha-helical ferredoxin
YSA_04280	SSF51971	Nucleotide-binding domain
YSA_04284	SSF51395	FMN-linked oxidoreductases
YSA_04284	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
YSA_04284	SSF69336	Alpha subunit of glutamate synthase, C-terminal domain
YSA_04289	SSF110997	Sporulation related repeat
YSA_04289	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_04291	SSF56796	Dehydroquinate synthase-like
YSA_04292	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_04302	SSF53067	Actin-like ATPase domain
YSA_04304	SSF53955	Lysozyme-like
YSA_04304	SSF56601	beta-lactamase/transpeptidase-like
YSA_04307	SSF51735	NAD(P)-binding Rossmann-fold domains
YSA_04307	SSF53223	Aminoacid dehydrogenase-like, N-terminal domain
YSA_04308	SSF50199	Staphylococcal nuclease
YSA_04311	SSF143800	L28p-like
YSA_04313	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_04314	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
YSA_04314	SSF52374	Nucleotidylyl transferase
YSA_04314	SSF55190	Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain
YSA_04317	SSF110997	Sporulation related repeat
YSA_04322	SSF54001	Cysteine proteinases
YSA_04323	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_04325	SSF51419	PLP-binding barrel
YSA_04327	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
YSA_04327	SSF51735	NAD(P)-binding Rossmann-fold domains
YSA_04329	SSF53474	alpha/beta-Hydrolases
YSA_04333	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
YSA_04335	SSF52972	ITPase-like
YSA_04337	SSF102114	Radical SAM enzymes
YSA_04340	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
YSA_04342	SSF110399	ThiG-like
YSA_04343	SSF54285	MoaD/ThiS
YSA_04348	SSF53955	Lysozyme-like
YSA_04349	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
YSA_04349	SSF88946	Sigma2 domain of RNA polymerase sigma factors
YSA_04353	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_04355	SSF47364	Domain of the SRP/SRP receptor G-proteins
YSA_04355	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_04358	SSF63411	LuxS/MPP-like metallohydrolase
YSA_04361	SSF63411	LuxS/MPP-like metallohydrolase
YSA_04363	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
YSA_04365	SSF63411	LuxS/MPP-like metallohydrolase
YSA_04366	SSF63411	LuxS/MPP-like metallohydrolase
YSA_04368	SSF53474	alpha/beta-Hydrolases
YSA_04369	SSF52821	Rhodanese/Cell cycle control phosphatase
YSA_04370	SSF46689	Homeodomain-like
YSA_04372	SSF53720	ALDH-like
YSA_04376	SSF51905	FAD/NAD(P)-binding domain
YSA_04379	SSF52374	Nucleotidylyl transferase
YSA_04380	SSF54862	4Fe-4S ferredoxins
YSA_04382	SSF46946	S13-like H2TH domain
YSA_04382	SSF57716	Glucocorticoid receptor-like (DNA-binding domain)
YSA_04382	SSF81624	N-terminal domain of MutM-like DNA repair proteins
YSA_04384	SSF109604	HD-domain/PDEase-like
YSA_04386	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
YSA_04386	SSF88697	PUA domain-like
YSA_04388	SSF143975	IlvD/EDD N-terminal domain-like
YSA_04388	SSF52016	LeuD/IlvD-like
YSA_04390	SSF52949	Macro domain-like
YSA_04396	SSF56784	HAD-like
YSA_04397	SSF118215	Proton glutamate symport protein
YSA_04399	SSF53597	Dihydrofolate reductase-like
YSA_04401	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_04403	SSF53850	Periplasmic binding protein-like II
YSA_04404	SSF161098	MetI-like
YSA_04406	SSF50331	MOP-like
YSA_04406	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_04407	SSF46785	"Winged helix" DNA-binding domain
YSA_04407	SSF53850	Periplasmic binding protein-like II
YSA_04408	SSF55008	HMA, heavy metal-associated domain
YSA_04408	SSF56784	HAD-like
YSA_04408	SSF81653	Calcium ATPase, transduction domain A
YSA_04408	SSF81665	Calcium ATPase, transmembrane domain M
YSA_04411	SSF46955	Putative DNA-binding domain
YSA_04412	SSF55831	Thymidylate synthase/dCMP hydroxymethylase
YSA_04420	SSF47831	Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain
YSA_04420	SSF51621	Phosphoenolpyruvate/pyruvate domain
YSA_04420	SSF52009	Phosphohistidine domain
YSA_04420	SSF55781	GAF domain-like
YSA_04422	SSF55811	Nudix
YSA_04423	SSF56784	HAD-like
YSA_04426	SSF53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes
YSA_04426	SSF55021	ACT-like
YSA_04428	SSF100950	NagB/RpiA/CoA transferase-like
YSA_04428	SSF75445	D-ribose-5-phosphate isomerase (RpiA), lid domain
YSA_04430	SSF50956	Thermostable phytase (3-phytase)
YSA_04433	SSF50956	Thermostable phytase (3-phytase)
YSA_04435	SSF53098	Ribonuclease H-like
YSA_04436	SSF46689	Homeodomain-like
YSA_04437	SSF56529	FAH
YSA_04439	SSF55103	FAD-linked oxidases, C-terminal domain
YSA_04439	SSF56176	FAD-binding/transporter-associated domain-like
YSA_04440	SSF51735	NAD(P)-binding Rossmann-fold domains
YSA_04440	SSF52283	Formate/glycerate dehydrogenase catalytic domain-like
YSA_04440	SSF55021	ACT-like
YSA_04445	SSF53850	Periplasmic binding protein-like II
YSA_04450	SSF53474	alpha/beta-Hydrolases
YSA_04451	SSF52833	Thioredoxin-like
YSA_04452	SSF51161	Trimeric LpxA-like enzymes
YSA_04456	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
YSA_04460	SSF53850	Periplasmic binding protein-like II
YSA_04462	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_04463	SSF53474	alpha/beta-Hydrolases
YSA_04464	SSF50331	MOP-like
YSA_04464	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_04466	SSF161098	MetI-like
YSA_04468	SSF161098	MetI-like
YSA_04470	SSF53850	Periplasmic binding protein-like II
YSA_04475	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
YSA_04475	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
YSA_04475	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
YSA_04476	SSF111369	HlyD-like secretion proteins
YSA_04478	SSF111369	HlyD-like secretion proteins
YSA_04479	SSF143422	Transposase IS200-like
YSA_04480	SSF161098	MetI-like
YSA_04482	SSF161098	MetI-like
YSA_04485	SSF50331	MOP-like
YSA_04485	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_04487	SSF53850	Periplasmic binding protein-like II
YSA_04490	SSF53850	Periplasmic binding protein-like II
YSA_04493	SSF53383	PLP-dependent transferases
YSA_04494	SSF54368	Glutamine synthetase, N-terminal domain
YSA_04494	SSF55931	Glutamine synthetase/guanido kinase
YSA_04498	SSF54368	Glutamine synthetase, N-terminal domain
YSA_04498	SSF55931	Glutamine synthetase/guanido kinase
YSA_04499	SSF53633	Carbamate kinase-like
YSA_04499	SSF55729	Acyl-CoA N-acyltransferases (Nat)
YSA_04500	SSF53187	Zn-dependent exopeptidases
YSA_04500	SSF55031	Bacterial exopeptidase dimerisation domain
YSA_04504	SSF55154	CYTH-like phosphatases
YSA_04505	SSF46785	"Winged helix" DNA-binding domain
YSA_04505	SSF54909	Dimeric alpha+beta barrel
YSA_04509	SSF160246	EspE N-terminal domain-like
YSA_04509	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_04514	SSF53383	PLP-dependent transferases
YSA_04516	SSF51230	Single hybrid motif
YSA_04518	SSF101790	Aminomethyltransferase beta-barrel domain
YSA_04518	SSF103025	Folate-binding domain
YSA_04520	SSF161098	MetI-like
YSA_04521	SSF53850	Periplasmic binding protein-like II
YSA_04522	SSF51905	FAD/NAD(P)-binding domain
YSA_04524	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
YSA_04525	SSF51905	FAD/NAD(P)-binding domain
YSA_04528	SSF53092	Creatinase/prolidase N-terminal domain
YSA_04528	SSF55920	Creatinase/aminopeptidase
YSA_04530	SSF101327	YgfB-like
YSA_04534	SSF102829	Cell division protein ZapA-like
YSA_04537	SSF100950	NagB/RpiA/CoA transferase-like
YSA_04539	SSF88697	PUA domain-like
YSA_04543	SSF111369	HlyD-like secretion proteins
YSA_04545	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_04550	SSF50129	GroES-like
YSA_04551	SSF51735	NAD(P)-binding Rossmann-fold domains
YSA_04552	SSF110857	Gamma-glutamyl cyclotransferase-like
YSA_04554	SSF52343	Ferredoxin reductase-like, C-terminal NADP-linked domain
YSA_04554	SSF54292	2Fe-2S ferredoxin-like
YSA_04554	SSF63380	Riboflavin synthase domain-like
YSA_04556	SSF143968	UbiD C-terminal domain-like
YSA_04556	SSF50475	FMN-binding split barrel
YSA_04558	SSF50249	Nucleic acid-binding proteins
YSA_04558	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_04558	SSF68912	Rho N-terminal domain-like
YSA_04559	SSF52833	Thioredoxin-like
YSA_04561	SSF109604	HD-domain/PDEase-like
YSA_04561	SSF53067	Actin-like ATPase domain
YSA_04563	SSF140356	PPK N-terminal domain-like
YSA_04563	SSF143724	PHP14-like
YSA_04563	SSF56024	Phospholipase D/nuclease
YSA_04568	SSF52317	Class I glutamine amidotransferase-like
YSA_04577	SSF54534	FKBP-like
YSA_04581	SSF55387	Frataxin/Nqo15-like
YSA_04585	SSF50621	Alanine racemase C-terminal domain-like
YSA_04585	SSF51419	PLP-binding barrel
YSA_04587	SSF54506	Diaminopimelate epimerase-like
YSA_04591	SSF47823	lambda integrase-like, N-terminal domain
YSA_04591	SSF56349	DNA breaking-rejoining enzymes
YSA_04592	SSF56784	HAD-like
YSA_04596	SSF111352	Ammonium transporter
YSA_04597	SSF54913	GlnB-like
YSA_04604	SSF81901	HCP-like
YSA_04606	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_04606	SSF54211	Ribosomal protein S5 domain 2-like
YSA_04607	SSF52172	CheY-like
YSA_04608	SSF46894	C-terminal effector domain of the bipartite response regulators
YSA_04608	SSF52172	CheY-like
YSA_04611	SSF47384	Homodimeric domain of signal transducing histidine kinase
YSA_04611	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_04611	SSF55781	GAF domain-like
YSA_04611	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
YSA_04611	SSF56112	Protein kinase-like (PK-like)
YSA_04612	SSF52499	Isochorismatase-like hydrolases
YSA_04614	SSF46689	Homeodomain-like
YSA_04615	SSF46689	Homeodomain-like
YSA_04615	SSF52317	Class I glutamine amidotransferase-like
YSA_04618	SSF51735	NAD(P)-binding Rossmann-fold domains
YSA_04623	SSF52499	Isochorismatase-like hydrolases
YSA_04625	SSF46785	"Winged helix" DNA-binding domain
YSA_04625	SSF53850	Periplasmic binding protein-like II
YSA_04629	SSF103473	MFS general substrate transporter
YSA_04630	SSF51338	Composite domain of metallo-dependent hydrolases
YSA_04630	SSF51556	Metallo-dependent hydrolases
YSA_04632	SSF53474	alpha/beta-Hydrolases
YSA_04635	SSF52499	Isochorismatase-like hydrolases
YSA_04637	SSF50182	Sm-like ribonucleoproteins
YSA_04637	SSF51206	cAMP-binding domain-like
YSA_04639	SSF51905	FAD/NAD(P)-binding domain
YSA_04641	SSF53720	ALDH-like
YSA_04642	SSF46785	"Winged helix" DNA-binding domain
YSA_04642	SSF53850	Periplasmic binding protein-like II
YSA_04645	SSF46785	"Winged helix" DNA-binding domain
YSA_04645	SSF53850	Periplasmic binding protein-like II
YSA_04651	SSF141868	EAL domain-like
YSA_04651	SSF55073	Nucleotide cyclase
YSA_04656	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_04657	SSF53271	PRTase-like
YSA_04659	SSF100950	NagB/RpiA/CoA transferase-like
YSA_04661	SSF46626	Cytochrome c
YSA_04663	SSF47413	lambda repressor-like DNA-binding domains
YSA_04663	SSF51182	RmlC-like cupins
YSA_04664	SSF50621	Alanine racemase C-terminal domain-like
YSA_04664	SSF51419	PLP-binding barrel
YSA_04666	SSF51905	FAD/NAD(P)-binding domain
YSA_04666	SSF54373	FAD-linked reductases, C-terminal domain
YSA_04667	SSF46785	"Winged helix" DNA-binding domain
YSA_04667	SSF54909	Dimeric alpha+beta barrel
YSA_04669	SSF51905	FAD/NAD(P)-binding domain
YSA_04672	SSF46785	"Winged helix" DNA-binding domain
YSA_04672	SSF53383	PLP-dependent transferases
YSA_04674	SSF56024	Phospholipase D/nuclease
YSA_04675	SSF103473	MFS general substrate transporter
YSA_04677	SSF53720	ALDH-like
YSA_04680	SSF51182	RmlC-like cupins
YSA_04684	SSF57829	Zn-binding ribosomal proteins
YSA_04685	SSF143800	L28p-like
YSA_04688	SSF53850	Periplasmic binding protein-like II
YSA_04691	SSF56349	DNA breaking-rejoining enzymes
YSA_04694	SSF56349	DNA breaking-rejoining enzymes
YSA_04707	SSF47413	lambda repressor-like DNA-binding domains
YSA_04715	SSF46689	Homeodomain-like
YSA_04726	SSF49785	Galactose-binding domain-like
YSA_04726	SSF53474	alpha/beta-Hydrolases
YSA_04732	SSF46785	"Winged helix" DNA-binding domain
YSA_04732	SSF53850	Periplasmic binding protein-like II
YSA_04738	SSF53649	Alkaline phosphatase-like
YSA_04743	SSF160240	Cation efflux protein cytoplasmic domain-like
YSA_04743	SSF161111	Cation efflux protein transmembrane domain-like
YSA_04750	SSF52172	CheY-like
YSA_04754	SSF47384	Homodimeric domain of signal transducing histidine kinase
YSA_04754	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
YSA_04761	SSF53448	Nucleotide-diphospho-sugar transferases
YSA_04767	SSF46785	"Winged helix" DNA-binding domain
YSA_04767	SSF53850	Periplasmic binding protein-like II
YSA_04768	SSF56935	Porins
YSA_04776	SSF56784	HAD-like
YSA_04776	SSF81653	Calcium ATPase, transduction domain A
YSA_04776	SSF81665	Calcium ATPase, transmembrane domain M
YSA_04784	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
YSA_04784	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
YSA_04784	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
YSA_04786	SSF111369	HlyD-like secretion proteins
YSA_04789	SSF56954	Outer membrane efflux proteins (OEP)
YSA_04795	SSF52172	CheY-like
YSA_04806	SSF53474	alpha/beta-Hydrolases
YSA_04812	SSF47781	RuvA domain 2-like
YSA_04813	SSF102645	CoaB-like
YSA_04813	SSF52507	Homo-oligomeric flavin-containing Cys decarboxylases, HFCD
YSA_04815	SSF51283	dUTPase-like
YSA_04816	SSF53738	Phosphoglucomutase, first 3 domains
YSA_04816	SSF55957	Phosphoglucomutase, C-terminal domain
YSA_04818	SSF53633	Carbamate kinase-like
YSA_04820	SSF53271	PRTase-like
YSA_04821	SSF56219	DNase I-like
YSA_04827	SSF54211	Ribosomal protein S5 domain 2-like
YSA_04827	SSF55666	Ribonuclease PH domain 2-like
YSA_04831	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_04836	SSF52317	Class I glutamine amidotransferase-like
YSA_04837	SSF46785	"Winged helix" DNA-binding domain
YSA_04837	SSF53850	Periplasmic binding protein-like II
YSA_04838	SSF54368	Glutamine synthetase, N-terminal domain
YSA_04838	SSF55931	Glutamine synthetase/guanido kinase
YSA_04840	SSF63562	RPB6/omega subunit-like
YSA_04843	SSF109604	HD-domain/PDEase-like
YSA_04843	SSF55021	ACT-like
YSA_04843	SSF81271	TGS-like
YSA_04843	SSF81301	Nucleotidyltransferase
YSA_04844	SSF55298	YjgF-like
YSA_04847	SSF51735	NAD(P)-binding Rossmann-fold domains
YSA_04853	SSF74653	TolA/TonB C-terminal domain
YSA_04854	SSF46785	"Winged helix" DNA-binding domain
YSA_04854	SSF53850	Periplasmic binding protein-like II
YSA_04857	SSF50249	Nucleic acid-binding proteins
YSA_04857	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_04859	SSF109604	HD-domain/PDEase-like
YSA_04859	SSF55826	YbaK/ProRS associated domain
YSA_04861	SSF55718	SCP-like
YSA_04862	SSF47729	IHF-like DNA-binding proteins
YSA_04864	SSF51905	FAD/NAD(P)-binding domain
YSA_04867	SSF57802	Rubredoxin-like
YSA_04868	SSF64288	Chorismate lyase-like
YSA_04873	SSF52172	CheY-like
YSA_04875	SSF47384	Homodimeric domain of signal transducing histidine kinase
YSA_04875	SSF55785	PYP-like sensor domain (PAS domain)
YSA_04875	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
YSA_04878	SSF54631	CBS-domain pair
YSA_04878	SSF56176	FAD-binding/transporter-associated domain-like
YSA_04880	SSF51261	Duplicated hybrid motif
YSA_04882	SSF52172	CheY-like
YSA_04884	SSF109755	PhoU-like
YSA_04885	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_04887	SSF161098	MetI-like
YSA_04889	SSF161098	MetI-like
YSA_04889	SSF69322	Tricorn protease domain 2
YSA_04891	SSF53850	Periplasmic binding protein-like II
YSA_04894	SSF103473	MFS general substrate transporter
YSA_04896	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
YSA_04898	SSF74650	Galactose mutarotase-like
YSA_04903	SSF51246	Rudiment single hybrid motif
YSA_04903	SSF52440	PreATP-grasp domain
YSA_04903	SSF56059	Glutathione synthetase ATP-binding domain-like
YSA_04905	SSF52255	N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE)
YSA_04906	SSF55486	Metalloproteases ("zincins"), catalytic domain
YSA_04909	SSF46785	"Winged helix" DNA-binding domain
YSA_04909	SSF53850	Periplasmic binding protein-like II
YSA_04913	SSF48557	L-aspartase-like
YSA_04915	SSF46689	Homeodomain-like
YSA_04916	SSF52768	Arginase/deacetylase
YSA_04918	SSF53850	Periplasmic binding protein-like II
YSA_04921	SSF46785	"Winged helix" DNA-binding domain
YSA_04921	SSF53383	PLP-dependent transferases
YSA_04923	SSF50475	FMN-binding split barrel
YSA_04924	SSF55729	Acyl-CoA N-acyltransferases (Nat)
YSA_04926	SSF55729	Acyl-CoA N-acyltransferases (Nat)
YSA_04928	SSF51230	Single hybrid motif
YSA_04928	SSF51569	Aldolase
YSA_04928	SSF89000	post-HMGL domain-like
YSA_04929	SSF51246	Rudiment single hybrid motif
YSA_04929	SSF52440	PreATP-grasp domain
YSA_04929	SSF56059	Glutathione synthetase ATP-binding domain-like
YSA_04932	SSF46785	"Winged helix" DNA-binding domain
YSA_04932	SSF53850	Periplasmic binding protein-like II
YSA_04936	SSF46689	Homeodomain-like
YSA_04936	SSF53697	SIS domain
YSA_04938	SSF51735	NAD(P)-binding Rossmann-fold domains
YSA_04938	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
YSA_04940	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_04942	SSF54427	NTF2-like
YSA_04944	SSF160631	SMI1/KNR4-like
YSA_04951	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
YSA_04954	SSF53613	Ribokinase-like
YSA_04956	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_04960	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_04968	SSF56024	Phospholipase D/nuclease
YSA_04969	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
YSA_04970	SSF51905	FAD/NAD(P)-binding domain
YSA_04970	SSF55424	FAD/NAD-linked reductases, dimerisation (C-terminal) domain
YSA_04973	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
YSA_04973	SSF52922	TK C-terminal domain-like
YSA_04975	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
YSA_04977	SSF103473	MFS general substrate transporter
YSA_04978	SSF51735	NAD(P)-binding Rossmann-fold domains
YSA_04981	SSF46785	"Winged helix" DNA-binding domain
YSA_04981	SSF53850	Periplasmic binding protein-like II
YSA_04990	SSF81901	HCP-like
YSA_05000	SSF54611	SecB-like
YSA_05004	SSF56399	ADP-ribosylation
YSA_05019	SSF53697	SIS domain
YSA_05019	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
YSA_05021	SSF100950	NagB/RpiA/CoA transferase-like
YSA_05021	SSF46785	"Winged helix" DNA-binding domain
YSA_05024	SSF51161	Trimeric LpxA-like enzymes
YSA_05024	SSF53448	Nucleotide-diphospho-sugar transferases
YSA_05026	SSF46604	Epsilon subunit of F1F0-ATP synthase C-terminal domain
YSA_05026	SSF51344	Epsilon subunit of F1F0-ATP synthase N-terminal domain
YSA_05029	SSF47917	C-terminal domain of alpha and beta subunits of F1 ATP synthase
YSA_05029	SSF50615	N-terminal domain of alpha and beta subunits of F1 ATP synthase
YSA_05029	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_05030	SSF52943	ATP synthase (F1-ATPase), gamma subunit
YSA_05032	SSF47917	C-terminal domain of alpha and beta subunits of F1 ATP synthase
YSA_05032	SSF50615	N-terminal domain of alpha and beta subunits of F1 ATP synthase
YSA_05032	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_05034	SSF47928	N-terminal domain of the delta subunit of the F1F0-ATP synthase
YSA_05035	SSF81573	F1F0 ATP synthase subunit B, membrane domain
YSA_05037	SSF81333	F1F0 ATP synthase subunit C
YSA_05038	SSF81336	F1F0 ATP synthase subunit A
YSA_05041	SSF110849	ParB/Sulfiredoxin
YSA_05043	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_05045	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
YSA_05047	SSF51905	FAD/NAD(P)-binding domain
YSA_05051	SSF116878	TrmE connector domain
YSA_05051	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_05057	SSF54211	Ribosomal protein S5 domain 2-like
YSA_05060	SSF48295	TrpR-like
YSA_05060	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_05063	SSF55979	DNA clamp
YSA_05065	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_05066	SSF54211	Ribosomal protein S5 domain 2-like
YSA_05066	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
YSA_05066	SSF56719	Type II DNA topoisomerase
YSA_05071	SSF46689	Homeodomain-like
YSA_05071	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_05073	SSF56281	Metallo-hydrolase/oxidoreductase
YSA_05074	SSF51905	FAD/NAD(P)-binding domain
YSA_05076	SSF46785	"Winged helix" DNA-binding domain
YSA_05076	SSF53850	Periplasmic binding protein-like II
YSA_05080	SSF51905	FAD/NAD(P)-binding domain
YSA_05080	SSF54373	FAD-linked reductases, C-terminal domain
YSA_05081	SSF103473	MFS general substrate transporter
YSA_05084	SSF69593	Glycerol-3-phosphate (1)-acyltransferase
YSA_05086	SSF56784	HAD-like
YSA_05087	SSF109604	HD-domain/PDEase-like
YSA_05090	SSF55681	Class II aaRS and biotin synthetases
YSA_05091	SSF48150	DNA-glycosylase
YSA_05094	SSF48452	TPR-like
YSA_05096	SSF116726	TrkA C-terminal domain-like
YSA_05096	SSF51735	NAD(P)-binding Rossmann-fold domains
YSA_05099	SSF48013	NusB-like
YSA_05099	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
YSA_05101	SSF50486	FMT C-terminal domain-like
YSA_05101	SSF53328	Formyltransferase
YSA_05102	SSF56420	Peptide deformylase
YSA_05105	SSF102405	MCP/YpsA-like
YSA_05108	SSF55821	YrdC/RibB
YSA_05111	SSF50129	GroES-like
YSA_05111	SSF51735	NAD(P)-binding Rossmann-fold domains
YSA_05112	SSF102886	Coproporphyrinogen III oxidase
YSA_05113	SSF51735	NAD(P)-binding Rossmann-fold domains
YSA_05113	SSF53223	Aminoacid dehydrogenase-like, N-terminal domain
YSA_05116	SSF52091	SpoIIaa-like
YSA_05118	SSF53850	Periplasmic binding protein-like II
YSA_05119	SSF53649	Alkaline phosphatase-like
YSA_05121	SSF46785	"Winged helix" DNA-binding domain
YSA_05121	SSF53850	Periplasmic binding protein-like II
YSA_05124	SSF51735	NAD(P)-binding Rossmann-fold domains
YSA_05125	SSF143410	DOPA-like
YSA_05126	SSF51366	Ribulose-phoshate binding barrel
YSA_05129	SSF53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes
YSA_05130	SSF46785	"Winged helix" DNA-binding domain
YSA_05130	SSF53850	Periplasmic binding protein-like II
YSA_05133	SSF89807	Dodecin-like
YSA_05136	SSF51679	Bacterial luciferase-like
YSA_05138	SSF82784	OsmC-like
YSA_05150	SSF56784	HAD-like
YSA_05151	SSF51161	Trimeric LpxA-like enzymes
YSA_05152	SSF55486	Metalloproteases ("zincins"), catalytic domain
YSA_05157	SSF55486	Metalloproteases ("zincins"), catalytic domain
YSA_05159	SSF102114	Radical SAM enzymes
YSA_05162	SSF53056	beta-carbonic anhydrase, cab
YSA_05172	SSF46626	Cytochrome c
YSA_05172	SSF49503	Cupredoxins
YSA_05172	SSF81464	Cytochrome c oxidase subunit II-like, transmembrane region
YSA_05174	SSF81442	Cytochrome c oxidase subunit I-like
YSA_05176	SSF110111	Ctag/Cox11
YSA_05178	SSF81452	Cytochrome c oxidase subunit III-like
YSA_05181	SSF52833	Thioredoxin-like
YSA_05185	SSF52833	Thioredoxin-like
YSA_05187	SSF53850	Periplasmic binding protein-like II
YSA_05189	SSF161098	MetI-like
YSA_05192	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_05192	SSF55021	ACT-like
YSA_05195	SSF52317	Class I glutamine amidotransferase-like
YSA_05195	SSF56634	Heme-dependent catalase-like
YSA_05201	SSF81345	ABC transporter involved in vitamin B12 uptake, BtuC
YSA_05202	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_05204	SSF46785	"Winged helix" DNA-binding domain
YSA_05205	SSF53807	"Helical backbone" metal receptor
YSA_05206	SSF56112	Protein kinase-like (PK-like)
YSA_05210	SSF47807	5' to 3' exonuclease, C-terminal subdomain
YSA_05210	SSF53098	Ribonuclease H-like
YSA_05210	SSF56672	DNA/RNA polymerases
YSA_05210	SSF88723	PIN domain-like
YSA_05211	SSF46626	Cytochrome c
YSA_05212	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_05213	SSF46626	Cytochrome c
YSA_05215	SSF52833	Thioredoxin-like
YSA_05217	SSF56219	DNase I-like
YSA_05218	SSF55073	Nucleotide cyclase
YSA_05220	SSF47090	PGBD-like
YSA_05220	SSF55846	N-acetylmuramoyl-L-alanine amidase-like
YSA_05223	SSF141868	EAL domain-like
YSA_05225	SSF158472	HAMP domain-like
YSA_05225	SSF47384	Homodimeric domain of signal transducing histidine kinase
YSA_05225	SSF55785	PYP-like sensor domain (PAS domain)
YSA_05225	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
YSA_05227	SSF46689	Homeodomain-like
YSA_05227	SSF52172	CheY-like
YSA_05227	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_05233	SSF89872	Inhibitor of vertebrate lysozyme, Ivy
YSA_05235	SSF118215	Proton glutamate symport protein
YSA_05240	SSF159594	XCC0632-like
YSA_05242	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_05249	SSF63411	LuxS/MPP-like metallohydrolase
YSA_05250	SSF109755	PhoU-like
YSA_05258	SSF51316	Mss4-like
YSA_05271	SSF100950	NagB/RpiA/CoA transferase-like
YSA_05276	SSF52467	DHS-like NAD/FAD-binding domain
YSA_05280	SSF51735	NAD(P)-binding Rossmann-fold domains
YSA_05280	SSF52283	Formate/glycerate dehydrogenase catalytic domain-like
YSA_05282	SSF46785	"Winged helix" DNA-binding domain
YSA_05282	SSF53850	Periplasmic binding protein-like II
YSA_05283	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
YSA_05283	SSF56645	Acyl-CoA dehydrogenase NM domain-like
YSA_05284	SSF89796	CoA-transferase family III (CaiB/BaiF)
YSA_05305	SSF56935	Porins
YSA_05309	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
YSA_05309	SSF88946	Sigma2 domain of RNA polymerase sigma factors
YSA_05311	SSF46785	"Winged helix" DNA-binding domain
YSA_05311	SSF48008	GntR ligand-binding domain-like
YSA_05315	SSF54001	Cysteine proteinases
YSA_05317	SSF141868	EAL domain-like
YSA_05317	SSF55073	Nucleotide cyclase
YSA_05321	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_05321	SSF90123	ABC transporter transmembrane region
YSA_05328	SSF141072	CalX-like
YSA_05329	SSF50998	Quinoprotein alcohol dehydrogenase-like
YSA_05332	SSF141072	CalX-like
YSA_05332	SSF51120	beta-Roll
YSA_05332	SSF53300	vWA-like
YSA_05336	SSF51197	Clavaminate synthase-like
YSA_05337	SSF53850	Periplasmic binding protein-like II
YSA_05340	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_05341	SSF161098	MetI-like
YSA_05343	SSF46785	"Winged helix" DNA-binding domain
YSA_05347	SSF81901	HCP-like
YSA_05348	SSF46785	"Winged helix" DNA-binding domain
YSA_05353	SSF111369	HlyD-like secretion proteins
YSA_05355	SSF56954	Outer membrane efflux proteins (OEP)
YSA_05364	SSF46626	Cytochrome c
YSA_05368	SSF47616	GST C-terminal domain-like
YSA_05368	SSF52833	Thioredoxin-like
YSA_05369	SSF48557	L-aspartase-like
YSA_05372	SSF52172	CheY-like
YSA_05374	SSF53850	Periplasmic binding protein-like II
YSA_05374	SSF54782	Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain
YSA_05375	SSF69618	HemD-like
YSA_05379	SSF48452	TPR-like
YSA_05380	SSF158442	DsbB-like
YSA_05385	SSF54534	FKBP-like
YSA_05391	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_05392	SSF50182	Sm-like ribonucleoproteins
YSA_05394	SSF117892	Band 7/SPFH domain
YSA_05395	SSF141322	NfeD domain-like
YSA_05395	SSF52096	ClpP/crotonase
YSA_05397	SSF55826	YbaK/ProRS associated domain
YSA_05403	SSF54631	CBS-domain pair
YSA_05404	SSF53187	Zn-dependent exopeptidases
YSA_05404	SSF55031	Bacterial exopeptidase dimerisation domain
YSA_05409	SSF53720	ALDH-like
YSA_05412	SSF53383	PLP-dependent transferases
YSA_05417	SSF109604	HD-domain/PDEase-like
YSA_05417	SSF52172	CheY-like
YSA_05419	SSF55073	Nucleotide cyclase
YSA_05419	SSF55785	PYP-like sensor domain (PAS domain)
YSA_05425	SSF141868	EAL domain-like
YSA_05425	SSF55073	Nucleotide cyclase
YSA_05425	SSF55785	PYP-like sensor domain (PAS domain)
YSA_05426	SSF161098	MetI-like
YSA_05428	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_05428	SSF55021	ACT-like
YSA_05430	SSF53850	Periplasmic binding protein-like II
YSA_05431	SSF51679	Bacterial luciferase-like
YSA_05432	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
YSA_05432	SSF56645	Acyl-CoA dehydrogenase NM domain-like
YSA_05433	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
YSA_05433	SSF56645	Acyl-CoA dehydrogenase NM domain-like
YSA_05436	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_05438	SSF161098	MetI-like
YSA_05440	SSF53850	Periplasmic binding protein-like II
YSA_05444	SSF51161	Trimeric LpxA-like enzymes
YSA_05448	SSF51197	Clavaminate synthase-like
YSA_05450	SSF161098	MetI-like
YSA_05451	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_05453	SSF53850	Periplasmic binding protein-like II
YSA_05458	SSF52833	Thioredoxin-like
YSA_05460	SSF52218	Flavoproteins
YSA_05461	SSF53850	Periplasmic binding protein-like II
YSA_05462	SSF51679	Bacterial luciferase-like
YSA_05464	SSF161098	MetI-like
YSA_05466	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_05467	SSF50331	MOP-like
YSA_05469	SSF46689	Homeodomain-like
YSA_05470	SSF55931	Glutamine synthetase/guanido kinase
YSA_05472	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
YSA_05475	SSF158832	Tex N-terminal region-like
YSA_05475	SSF47781	RuvA domain 2-like
YSA_05475	SSF50249	Nucleic acid-binding proteins
YSA_05475	SSF53098	Ribonuclease H-like
YSA_05476	SSF46894	C-terminal effector domain of the bipartite response regulators
YSA_05476	SSF52172	CheY-like
YSA_05479	SSF47384	Homodimeric domain of signal transducing histidine kinase
YSA_05479	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
YSA_05480	SSF56059	Glutathione synthetase ATP-binding domain-like
YSA_05481	SSF50630	Acid proteases
YSA_05482	SSF55174	Alpha-L RNA-binding motif
YSA_05483	SSF48317	Acid phosphatase/Vanadium-dependent haloperoxidase
YSA_05487	SSF118352	HSP33 redox switch-like
YSA_05487	SSF64397	Hsp33 domain
YSA_05490	SSF53795	PEP carboxykinase-like
YSA_05490	SSF68923	PEP carboxykinase N-terminal domain
YSA_05494	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
YSA_05497	SSF50692	ADC-like
YSA_05497	SSF53706	Formate dehydrogenase/DMSO reductase, domains 1-3
YSA_05498	SSF53927	Cytidine deaminase-like
YSA_05500	SSF54106	LysM domain
YSA_05501	SSF56784	HAD-like
YSA_05502	SSF55811	Nudix
YSA_05503	SSF56655	Carbohydrate phosphatase
YSA_05504	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
YSA_05505	SSF46689	Homeodomain-like
YSA_05505	SSF52172	CheY-like
YSA_05505	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_05507	SSF103190	Sensory domain-like
YSA_05507	SSF47384	Homodimeric domain of signal transducing histidine kinase
YSA_05507	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
YSA_05508	SSF51182	RmlC-like cupins
YSA_05510	SSF55909	Pentein
YSA_05514	SSF56935	Porins
YSA_05519	SSF51395	FMN-linked oxidoreductases
YSA_05521	SSF47384	Homodimeric domain of signal transducing histidine kinase
YSA_05521	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
YSA_05522	SSF46894	C-terminal effector domain of the bipartite response regulators
YSA_05522	SSF52172	CheY-like
YSA_05524	SSF56935	Porins
YSA_05532	SSF47413	lambda repressor-like DNA-binding domains
YSA_05535	SSF47413	lambda repressor-like DNA-binding domains
YSA_05540	SSF56349	DNA breaking-rejoining enzymes
YSA_05547	SSF46689	Homeodomain-like
YSA_05549	SSF53098	Ribonuclease H-like
YSA_05562	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
YSA_05563	SSF161098	MetI-like
YSA_05565	SSF161098	MetI-like
YSA_05567	SSF53850	Periplasmic binding protein-like II
YSA_05568	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_05576	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_05579	SSF111148	YggX-like
YSA_05580	SSF48150	DNA-glycosylase
YSA_05580	SSF55811	Nudix
YSA_05584	SSF103473	MFS general substrate transporter
YSA_05585	SSF54211	Ribosomal protein S5 domain 2-like
YSA_05587	SSF52317	Class I glutamine amidotransferase-like
YSA_05589	SSF51366	Ribulose-phoshate binding barrel
YSA_05591	SSF51366	Ribulose-phoshate binding barrel
YSA_05593	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_05596	SSF161098	MetI-like
YSA_05597	SSF53850	Periplasmic binding protein-like II
YSA_05598	SSF143548	Serine metabolism enzymes domain
YSA_05602	SSF46689	Homeodomain-like
YSA_05602	SSF52317	Class I glutamine amidotransferase-like
YSA_05605	SSF50370	Ricin B-like lectins
YSA_05605	SSF55486	Metalloproteases ("zincins"), catalytic domain
YSA_05607	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
YSA_05609	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
YSA_05609	SSF51735	NAD(P)-binding Rossmann-fold domains
YSA_05613	SSF53850	Periplasmic binding protein-like II
YSA_05615	SSF46689	Homeodomain-like
YSA_05615	SSF52317	Class I glutamine amidotransferase-like
YSA_05620	SSF51556	Metallo-dependent hydrolases
YSA_05622	SSF111126	Ligand-binding domain in the NO signalling and Golgi transport
YSA_05623	SSF51395	FMN-linked oxidoreductases
YSA_05623	SSF51905	FAD/NAD(P)-binding domain
YSA_05625	SSF46548	alpha-helical ferredoxin
YSA_05628	SSF52402	Adenine nucleotide alpha hydrolases-like
YSA_05628	SSF52467	DHS-like NAD/FAD-binding domain
YSA_05630	SSF52402	Adenine nucleotide alpha hydrolases-like
YSA_05639	SSF50022	ISP domain
YSA_05639	SSF55961	Bet v1-like
YSA_05641	SSF52343	Ferredoxin reductase-like, C-terminal NADP-linked domain
YSA_05641	SSF54292	2Fe-2S ferredoxin-like
YSA_05641	SSF63380	Riboflavin synthase domain-like
YSA_05643	SSF56399	ADP-ribosylation
YSA_05644	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
YSA_05649	SSF102829	Cell division protein ZapA-like
YSA_05654	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
YSA_05656	SSF53383	PLP-dependent transferases
YSA_05657	SSF53383	PLP-dependent transferases
YSA_05659	SSF51905	FAD/NAD(P)-binding domain
YSA_05662	SSF101790	Aminomethyltransferase beta-barrel domain
YSA_05662	SSF103025	Folate-binding domain
YSA_05662	SSF51905	FAD/NAD(P)-binding domain
YSA_05664	SSF103025	Folate-binding domain
YSA_05666	SSF53328	Formyltransferase
YSA_05666	SSF55021	ACT-like
YSA_05668	SSF50129	GroES-like
YSA_05668	SSF51735	NAD(P)-binding Rossmann-fold domains
YSA_05674	SSF69593	Glycerol-3-phosphate (1)-acyltransferase
YSA_05676	SSF50630	Acid proteases
YSA_05679	SSF52172	CheY-like
YSA_05682	SSF103190	Sensory domain-like
YSA_05682	SSF47384	Homodimeric domain of signal transducing histidine kinase
YSA_05682	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
YSA_05685	SSF47616	GST C-terminal domain-like
YSA_05685	SSF52833	Thioredoxin-like
YSA_05686	SSF55068	Peptide methionine sulfoxide reductase
YSA_05690	SSF141868	EAL domain-like
YSA_05690	SSF55073	Nucleotide cyclase
YSA_05690	SSF55781	GAF domain-like
YSA_05690	SSF55785	PYP-like sensor domain (PAS domain)
YSA_05692	SSF47005	Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex
YSA_05692	SSF51230	Single hybrid motif
YSA_05692	SSF52777	CoA-dependent acyltransferases
YSA_05695	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
YSA_05695	SSF52922	TK C-terminal domain-like
YSA_05698	SSF81301	Nucleotidyltransferase
YSA_05698	SSF81593	Nucleotidyltransferase substrate binding subunit/domain
YSA_05700	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
YSA_05701	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
YSA_05704	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
YSA_05705	SSF56112	Protein kinase-like (PK-like)
YSA_05707	SSF56112	Protein kinase-like (PK-like)
YSA_05708	SSF56112	Protein kinase-like (PK-like)
YSA_05709	SSF56112	Protein kinase-like (PK-like)
YSA_05714	SSF56935	Porins
YSA_05717	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
YSA_05717	SSF88946	Sigma2 domain of RNA polymerase sigma factors
YSA_05719	SSF53098	Ribonuclease H-like
YSA_05720	SSF51206	cAMP-binding domain-like
YSA_05720	SSF54631	CBS-domain pair
YSA_05722	SSF52172	CheY-like
YSA_05723	SSF51645	Malate synthase G
YSA_05727	SSF55021	ACT-like
YSA_05730	SSF103481	Multidrug resistance efflux transporter EmrE
YSA_05732	SSF56112	Protein kinase-like (PK-like)
YSA_05733	SSF46785	"Winged helix" DNA-binding domain
YSA_05733	SSF50331	MOP-like
YSA_05734	SSF53271	PRTase-like
YSA_05735	SSF102114	Radical SAM enzymes
YSA_05737	SSF53383	PLP-dependent transferases
YSA_05738	SSF53474	alpha/beta-Hydrolases
YSA_05739	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
YSA_05741	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_05744	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
YSA_05744	SSF56645	Acyl-CoA dehydrogenase NM domain-like
YSA_05746	SSF55073	Nucleotide cyclase
YSA_05747	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
YSA_05747	SSF56645	Acyl-CoA dehydrogenase NM domain-like
YSA_05750	SSF46785	"Winged helix" DNA-binding domain
YSA_05750	SSF53850	Periplasmic binding protein-like II
YSA_05753	SSF53383	PLP-dependent transferases
YSA_05757	SSF53474	alpha/beta-Hydrolases
YSA_05757	SSF82171	DPP6 N-terminal domain-like
YSA_05759	SSF102114	Radical SAM enzymes
YSA_05761	SSF48613	Heme oxygenase-like
YSA_05763	SSF56281	Metallo-hydrolase/oxidoreductase
YSA_05767	SSF63411	LuxS/MPP-like metallohydrolase
YSA_05768	SSF56317	Carbon-nitrogen hydrolase
YSA_05771	SSF51905	FAD/NAD(P)-binding domain
YSA_05771	SSF54373	FAD-linked reductases, C-terminal domain
YSA_05773	SSF46785	"Winged helix" DNA-binding domain
YSA_05773	SSF54909	Dimeric alpha+beta barrel
YSA_05774	SSF51161	Trimeric LpxA-like enzymes
YSA_05780	SSF141868	EAL domain-like
YSA_05780	SSF53850	Periplasmic binding protein-like II
YSA_05780	SSF55073	Nucleotide cyclase
YSA_05780	SSF55785	PYP-like sensor domain (PAS domain)
YSA_05784	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
YSA_05784	SSF88946	Sigma2 domain of RNA polymerase sigma factors
YSA_05786	SSF117023	DNA primase DnaG, C-terminal domain
YSA_05786	SSF56731	DNA primase core
YSA_05786	SSF57783	Zinc beta-ribbon
YSA_05791	SSF53067	Actin-like ATPase domain
YSA_05795	SSF55620	Tetrahydrobiopterin biosynthesis enzymes-like
YSA_05797	SSF55083	6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK
YSA_05800	SSF81301	Nucleotidyltransferase
YSA_05800	SSF81891	Poly A polymerase C-terminal region-like
YSA_05807	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_05809	SSF52821	Rhodanese/Cell cycle control phosphatase
YSA_05810	SSF56300	Metallo-dependent phosphatases
YSA_05811	SSF110069	ApaG-like
YSA_05813	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
YSA_05814	SSF53659	Isocitrate/Isopropylmalate dehydrogenase-like
YSA_05816	SSF109998	Triger factor/SurA peptide-binding domain-like
YSA_05816	SSF54534	FKBP-like
YSA_05820	SSF56112	Protein kinase-like (PK-like)
YSA_05823	SSF53448	Nucleotide-diphospho-sugar transferases
YSA_05825	SSF158682	TerB-like
YSA_05825	SSF46565	Chaperone J-domain
YSA_05826	SSF53474	alpha/beta-Hydrolases
YSA_05828	SSF53850	Periplasmic binding protein-like II
YSA_05828	SSF55785	PYP-like sensor domain (PAS domain)
YSA_05828	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
YSA_05830	SSF46894	C-terminal effector domain of the bipartite response regulators
YSA_05830	SSF52172	CheY-like
YSA_05831	SSF50331	MOP-like
YSA_05831	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_05833	SSF53850	Periplasmic binding protein-like II
YSA_05836	SSF161098	MetI-like
YSA_05839	SSF161098	MetI-like
YSA_05841	SSF51366	Ribulose-phoshate binding barrel
YSA_05843	SSF56784	HAD-like
YSA_05844	SSF56322	ADC synthase
YSA_05848	SSF103515	Autotransporter
YSA_05848	SSF52266	SGNH hydrolase
YSA_05850	SSF52317	Class I glutamine amidotransferase-like
YSA_05851	SSF47648	Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain
YSA_05851	SSF52418	Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain
YSA_05854	SSF51366	Ribulose-phoshate binding barrel
YSA_05855	SSF55681	Class II aaRS and biotin synthetases
YSA_05856	SSF46785	"Winged helix" DNA-binding domain
YSA_05856	SSF51206	cAMP-binding domain-like
YSA_05857	SSF82784	OsmC-like
YSA_05862	SSF47240	Ferritin-like
YSA_05863	SSF54197	HIT-like
YSA_05864	SSF51735	NAD(P)-binding Rossmann-fold domains
YSA_05866	SSF51412	Inosine monophosphate dehydrogenase (IMPDH)
YSA_05869	SSF51735	NAD(P)-binding Rossmann-fold domains
YSA_05869	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
YSA_05872	SSF89360	HesB-like domain
YSA_05874	SSF53067	Actin-like ATPase domain
YSA_05876	SSF51261	Duplicated hybrid motif
YSA_05878	SSF52374	Nucleotidylyl transferase
YSA_05878	SSF55174	Alpha-L RNA-binding motif
YSA_05898	SSF46785	"Winged helix" DNA-binding domain
YSA_05898	SSF50037	C-terminal domain of transcriptional repressors
YSA_05898	SSF55681	Class II aaRS and biotin synthetases
YSA_05900	SSF53067	Actin-like ATPase domain
YSA_05907	SSF50447	Translation proteins
YSA_05907	SSF50465	EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
YSA_05907	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_05911	SSF50104	Translation proteins SH3-like domain
YSA_05911	SSF82679	N-utilization substance G protein NusG, N-terminal domain
YSA_05913	SSF46906	Ribosomal protein L11, C-terminal domain
YSA_05913	SSF54747	Ribosomal L11/L12e N-terminal domain
YSA_05915	SSF56808	Ribosomal protein L1
YSA_05917	SSF160369	Ribosomal protein L10-like
YSA_05918	SSF48300	Ribosomal protein L7/12, oligomerisation (N-terminal) domain
YSA_05918	SSF54736	ClpS-like
YSA_05922	SSF64484	beta and beta-prime subunits of DNA dependent RNA-polymerase
YSA_05925	SSF64484	beta and beta-prime subunits of DNA dependent RNA-polymerase
YSA_05926	SSF50249	Nucleic acid-binding proteins
YSA_05927	SSF47973	Ribosomal protein S7
YSA_05928	SSF50447	Translation proteins
YSA_05928	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_05928	SSF54211	Ribosomal protein S5 domain 2-like
YSA_05928	SSF54980	EF-G C-terminal domain-like
YSA_05930	SSF50447	Translation proteins
YSA_05930	SSF50465	EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
YSA_05930	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_05932	SSF54999	Ribosomal protein S10
YSA_05934	SSF50447	Translation proteins
YSA_05935	SSF52166	Ribosomal protein L4
YSA_05937	SSF54189	Ribosomal proteins S24e, L23 and L15e
YSA_05940	SSF50104	Translation proteins SH3-like domain
YSA_05940	SSF50249	Nucleic acid-binding proteins
YSA_05942	SSF54570	Ribosomal protein S19
YSA_05944	SSF54843	Ribosomal protein L22
YSA_05945	SSF54814	Prokaryotic type KH domain (KH-domain type II)
YSA_05945	SSF54821	Ribosomal protein S3 C-terminal domain
YSA_05946	SSF54686	Ribosomal protein L16p/L10e
YSA_05948	SSF46561	Ribosomal protein L29 (L29p)
YSA_05950	SSF50249	Nucleic acid-binding proteins
YSA_05951	SSF50193	Ribosomal protein L14
YSA_05952	SSF50104	Translation proteins SH3-like domain
YSA_05954	SSF55282	RL5-like
YSA_05956	SSF57716	Glucocorticoid receptor-like (DNA-binding domain)
YSA_05958	SSF56047	Ribosomal protein S8
YSA_05959	SSF56053	Ribosomal protein L6
YSA_05961	SSF53137	Translational machinery components
YSA_05962	SSF54211	Ribosomal protein S5 domain 2-like
YSA_05962	SSF54768	dsRNA-binding domain-like
YSA_05964	SSF55129	Ribosomal protein L30p/L7e
YSA_05965	SSF52080	Ribosomal proteins L15p and L18e
YSA_05966	SSF103491	Preprotein translocase SecY subunit
YSA_05968	SSF57840	Ribosomal protein L36
YSA_05969	SSF46946	S13-like H2TH domain
YSA_05971	SSF53137	Translational machinery components
YSA_05973	SSF55174	Alpha-L RNA-binding motif
YSA_05974	SSF47789	C-terminal domain of RNA polymerase alpha subunit
YSA_05974	SSF55257	RBP11-like subunits of RNA polymerase
YSA_05974	SSF56553	Insert subdomain of RNA polymerase alpha subunit
YSA_05976	SSF64263	Prokaryotic ribosomal protein L17
YSA_05979	SSF56634	Heme-dependent catalase-like
YSA_05981	SSF47240	Ferritin-like
YSA_05984	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_05985	SSF103473	MFS general substrate transporter
YSA_05986	SSF50249	Nucleic acid-binding proteins
YSA_05990	SSF46785	"Winged helix" DNA-binding domain
YSA_05990	SSF53383	PLP-dependent transferases
YSA_05994	SSF51735	NAD(P)-binding Rossmann-fold domains
YSA_05996	SSF53706	Formate dehydrogenase/DMSO reductase, domains 1-3
YSA_05999	SSF50692	ADC-like
YSA_05999	SSF53706	Formate dehydrogenase/DMSO reductase, domains 1-3
YSA_06000	SSF54862	4Fe-4S ferredoxins
YSA_06002	SSF81342	Transmembrane di-heme cytochromes
YSA_06003	SSF144020	FdhE-like
YSA_06005	SSF53383	PLP-dependent transferases
YSA_06007	SSF46785	"Winged helix" DNA-binding domain
YSA_06007	SSF50447	Translation proteins
YSA_06007	SSF50465	EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
YSA_06007	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_06011	SSF53774	Glutaminase/Asparaginase
YSA_06019	SSF53474	alpha/beta-Hydrolases
YSA_06024	SSF51735	NAD(P)-binding Rossmann-fold domains
YSA_06025	SSF51735	NAD(P)-binding Rossmann-fold domains
YSA_06026	SSF46785	"Winged helix" DNA-binding domain
YSA_06028	SSF103473	MFS general substrate transporter
YSA_06030	SSF56925	OMPA-like
YSA_06036	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_06044	SSF48452	TPR-like
YSA_06044	SSF52833	Thioredoxin-like
YSA_06045	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
YSA_06049	SSF53597	Dihydrofolate reductase-like
YSA_06049	SSF53927	Cytidine deaminase-like
YSA_06050	SSF63380	Riboflavin synthase domain-like
YSA_06051	SSF142695	RibA-like
YSA_06051	SSF55821	YrdC/RibB
YSA_06053	SSF52121	Lumazine synthase
YSA_06056	SSF48013	NusB-like
YSA_06058	SSF55326	PurM N-terminal domain-like
YSA_06058	SSF56042	PurM C-terminal domain-like
YSA_06059	SSF101307	YutG-like
YSA_06061	SSF53850	Periplasmic binding protein-like II
YSA_06062	SSF142695	RibA-like
YSA_06064	SSF53807	"Helical backbone" metal receptor
YSA_06065	SSF56935	Porins
YSA_06066	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
YSA_06066	SSF52922	TK C-terminal domain-like
YSA_06068	SSF48576	Terpenoid synthases
YSA_06069	SSF116842	XseB-like
YSA_06072	SSF55821	YrdC/RibB
YSA_06074	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_06075	SSF53474	alpha/beta-Hydrolases
YSA_06076	SSF158472	HAMP domain-like
YSA_06076	SSF47384	Homodimeric domain of signal transducing histidine kinase
YSA_06076	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
YSA_06078	SSF52172	CheY-like
YSA_06079	SSF56935	Porins
YSA_06086	SSF46626	Cytochrome c
YSA_06089	SSF56935	Porins
YSA_06093	SSF49503	Cupredoxins
YSA_06093	SSF69349	Phage fibre proteins
YSA_06098	SSF47413	lambda repressor-like DNA-binding domains
YSA_06098	SSF51306	LexA/Signal peptidase
YSA_06100	SSF50324	Inorganic pyrophosphatase
YSA_06102	SSF55486	Metalloproteases ("zincins"), catalytic domain
YSA_06108	SSF55729	Acyl-CoA N-acyltransferases (Nat)
YSA_06120	SSF53720	ALDH-like
YSA_06122	SSF46689	Homeodomain-like
YSA_06122	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_06122	SSF55781	GAF domain-like
YSA_06122	SSF55785	PYP-like sensor domain (PAS domain)
YSA_06123	SSF51984	MurCD N-terminal domain
YSA_06123	SSF53244	MurD-like peptide ligases, peptide-binding domain
YSA_06123	SSF53623	MurD-like peptide ligases, catalytic domain
YSA_06125	SSF52507	Homo-oligomeric flavin-containing Cys decarboxylases, HFCD
YSA_06128	SSF51735	NAD(P)-binding Rossmann-fold domains
YSA_06130	SSF52129	Caspase-like
YSA_06130	SSF82185	Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain
YSA_06132	SSF50129	GroES-like
YSA_06132	SSF51735	NAD(P)-binding Rossmann-fold domains
YSA_06135	SSF51230	Single hybrid motif
YSA_06135	SSF53474	alpha/beta-Hydrolases
YSA_06137	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
YSA_06137	SSF52922	TK C-terminal domain-like
YSA_06139	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
YSA_06140	SSF111331	NAD kinase/diacylglycerol kinase-like
YSA_06142	SSF46689	Homeodomain-like
YSA_06142	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_06142	SSF55781	GAF domain-like
YSA_06143	SSF51246	Rudiment single hybrid motif
YSA_06143	SSF52440	PreATP-grasp domain
YSA_06143	SSF56059	Glutathione synthetase ATP-binding domain-like
YSA_06146	SSF51230	Single hybrid motif
YSA_06147	SSF52304	Type II 3-dehydroquinate dehydratase
YSA_06149	SSF52833	Thioredoxin-like
YSA_06149	SSF74863	Thiol:disulfide interchange protein DsbD, N-terminal domain (DsbD-alpha)
YSA_06151	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
YSA_06153	SSF52172	CheY-like
YSA_06153	SSF55073	Nucleotide cyclase
YSA_06156	SSF55811	Nudix
YSA_06158	SSF55159	eIF1-like
YSA_06160	SSF50621	Alanine racemase C-terminal domain-like
YSA_06160	SSF51419	PLP-binding barrel
YSA_06163	SSF143422	Transposase IS200-like
YSA_06167	SSF48239	Terpenoid cyclases/Protein prenyltransferases
YSA_06170	SSF53955	Lysozyme-like
YSA_06170	SSF56601	beta-lactamase/transpeptidase-like
YSA_06174	SSF46894	C-terminal effector domain of the bipartite response regulators
YSA_06174	SSF52172	CheY-like
YSA_06180	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
YSA_06181	SSF101386	all-alpha NTP pyrophosphatases
YSA_06184	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
YSA_06185	SSF51735	NAD(P)-binding Rossmann-fold domains
YSA_06186	SSF53901	Thiolase-like
YSA_06188	SSF46689	Homeodomain-like
YSA_06188	SSF51182	RmlC-like cupins
YSA_06191	SSF103190	Sensory domain-like
YSA_06191	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
YSA_06193	SSF46955	Putative DNA-binding domain
YSA_06195	SSF55008	HMA, heavy metal-associated domain
YSA_06195	SSF56784	HAD-like
YSA_06195	SSF81653	Calcium ATPase, transduction domain A
YSA_06195	SSF81665	Calcium ATPase, transmembrane domain M
YSA_06197	SSF55008	HMA, heavy metal-associated domain
YSA_06199	SSF103473	MFS general substrate transporter
YSA_06205	SSF46785	"Winged helix" DNA-binding domain
YSA_06207	SSF51556	Metallo-dependent hydrolases
YSA_06209	SSF51735	NAD(P)-binding Rossmann-fold domains
YSA_06212	SSF54211	Ribosomal protein S5 domain 2-like
YSA_06212	SSF54980	EF-G C-terminal domain-like
YSA_06214	SSF46689	Homeodomain-like
YSA_06214	SSF48498	Tetracyclin repressor-like, C-terminal domain
YSA_06216	SSF46785	"Winged helix" DNA-binding domain
YSA_06216	SSF53850	Periplasmic binding protein-like II
YSA_06218	SSF53383	PLP-dependent transferases
YSA_06220	SSF53720	ALDH-like
YSA_06247	SSF46992	Ribosomal protein S20
YSA_06256	SSF52374	Nucleotidylyl transferase
YSA_06256	SSF82114	Riboflavin kinase-like
YSA_06257	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
YSA_06257	SSF50677	ValRS/IleRS/LeuRS editing domain
YSA_06257	SSF52374	Nucleotidylyl transferase
YSA_06261	SSF54534	FKBP-like
YSA_06263	SSF54523	Pili subunits
YSA_06271	SSF54523	Pili subunits
YSA_06273	SSF51905	FAD/NAD(P)-binding domain
YSA_06273	SSF54373	FAD-linked reductases, C-terminal domain
YSA_06277	SSF75304	Amidase signature (AS) enzymes
YSA_06279	SSF53187	Zn-dependent exopeptidases
YSA_06279	SSF55031	Bacterial exopeptidase dimerisation domain
YSA_06280	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_06281	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_06288	SSF53822	Periplasmic binding protein-like I
YSA_06289	SSF46785	"Winged helix" DNA-binding domain
YSA_06289	SSF48008	GntR ligand-binding domain-like
YSA_06292	SSF48452	TPR-like
YSA_06293	SSF55120	Pseudouridine synthase
YSA_06293	SSF55174	Alpha-L RNA-binding motif
YSA_06294	SSF64438	CNF1/YfiH-like putative cysteine hydrolases
YSA_06299	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_06299	SSF81923	Double Clp-N motif
YSA_06307	SSF51905	FAD/NAD(P)-binding domain
YSA_06312	SSF52980	Restriction endonuclease-like
YSA_06318	SSF57716	Glucocorticoid receptor-like (DNA-binding domain)
YSA_06319	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_06324	SSF54523	Pili subunits
YSA_06326	SSF56672	DNA/RNA polymerases
YSA_06328	SSF50249	Nucleic acid-binding proteins
YSA_06341	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_06351	SSF53271	PRTase-like
YSA_06354	SSF47413	lambda repressor-like DNA-binding domains
YSA_06368	SSF47413	lambda repressor-like DNA-binding domains
YSA_06369	SSF51316	Mss4-like
YSA_06372	SSF55811	Nudix
YSA_06374	SSF55729	Acyl-CoA N-acyltransferases (Nat)
YSA_06385	SSF51735	NAD(P)-binding Rossmann-fold domains
YSA_06385	SSF56327	LDH C-terminal domain-like
YSA_06387	SSF161098	MetI-like
YSA_06388	SSF53850	Periplasmic binding protein-like II
YSA_06389	SSF82282	Homocysteine S-methyltransferase
YSA_06392	SSF53383	PLP-dependent transferases
YSA_06396	SSF46785	"Winged helix" DNA-binding domain
YSA_06396	SSF53850	Periplasmic binding protein-like II
YSA_06398	SSF53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes
YSA_06399	SSF46785	"Winged helix" DNA-binding domain
YSA_06399	SSF54909	Dimeric alpha+beta barrel
YSA_06400	SSF51735	NAD(P)-binding Rossmann-fold domains
YSA_06400	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
YSA_06401	SSF53720	ALDH-like
YSA_06403	SSF55298	YjgF-like
YSA_06408	SSF53383	PLP-dependent transferases
YSA_06410	SSF141868	EAL domain-like
YSA_06410	SSF55073	Nucleotide cyclase
YSA_06410	SSF55785	PYP-like sensor domain (PAS domain)
YSA_06415	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_06418	SSF51735	NAD(P)-binding Rossmann-fold domains
YSA_06418	SSF53223	Aminoacid dehydrogenase-like, N-terminal domain
YSA_06420	SSF54534	FKBP-like
YSA_06432	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_06432	SSF54211	Ribosomal protein S5 domain 2-like
YSA_06440	SSF54534	FKBP-like
YSA_06442	SSF57783	Zinc beta-ribbon
YSA_06442	SSF82057	Prokaryotic SH3-related domain
YSA_06444	SSF48576	Terpenoid synthases
YSA_06445	SSF141091	L21p-like
YSA_06446	SSF110324	Ribosomal L27 protein-like
YSA_06448	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_06448	SSF82051	Obg GTP-binding protein N-terminal domain
YSA_06450	SSF53633	Carbamate kinase-like
YSA_06450	SSF88697	PUA domain-like
YSA_06462	SSF55729	Acyl-CoA N-acyltransferases (Nat)
YSA_06466	SSF46785	"Winged helix" DNA-binding domain
YSA_06466	SSF53850	Periplasmic binding protein-like II
YSA_06474	SSF103473	MFS general substrate transporter
YSA_06477	SSF103473	MFS general substrate transporter
YSA_06480	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
YSA_06480	SSF88946	Sigma2 domain of RNA polymerase sigma factors
YSA_06482	SSF48150	DNA-glycosylase
YSA_06483	SSF46689	Homeodomain-like
YSA_06483	SSF46767	Methylated DNA-protein cysteine methyltransferase, C-terminal domain
YSA_06483	SSF53155	Methylated DNA-protein cysteine methyltransferase domain
YSA_06483	SSF57884	Ada DNA repair protein, N-terminal domain (N-Ada 10)
YSA_06485	SSF50182	Sm-like ribonucleoproteins
YSA_06485	SSF82689	Mechanosensitive channel protein MscS (YggB), C-terminal domain
YSA_06485	SSF82861	Mechanosensitive channel protein MscS (YggB), transmembrane region
YSA_06488	SSF53720	ALDH-like
YSA_06492	SSF54427	NTF2-like
YSA_06493	SSF52499	Isochorismatase-like hydrolases
YSA_06495	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_06501	SSF56954	Outer membrane efflux proteins (OEP)
YSA_06502	SSF111369	HlyD-like secretion proteins
YSA_06506	SSF52091	SpoIIaa-like
YSA_06508	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_06508	SSF81271	TGS-like
YSA_06510	SSF53178	Peptidyl-tRNA hydrolase-like
YSA_06512	SSF50715	Ribosomal protein L25-like
YSA_06514	SSF53271	PRTase-like
YSA_06515	SSF54211	Ribosomal protein S5 domain 2-like
YSA_06515	SSF55060	GHMP Kinase, C-terminal domain
YSA_06516	SSF89392	Prokaryotic lipoproteins and lipoprotein localization factors
YSA_06519	SSF48452	TPR-like
YSA_06528	SSF141452	Hcp1-like
YSA_06534	SSF51735	NAD(P)-binding Rossmann-fold domains
YSA_06534	SSF69075	Glutamyl tRNA-reductase dimerization domain
YSA_06534	SSF69742	Glutamyl tRNA-reductase catalytic, N-terminal domain
YSA_06536	SSF75620	Release factor
YSA_06538	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
YSA_06539	SSF69572	Activating enzymes of the ubiquitin-like proteins
YSA_06541	SSF53681	Aspartate/glutamate racemase
YSA_06542	SSF56925	OMPA-like
YSA_06544	SSF51735	NAD(P)-binding Rossmann-fold domains
YSA_06545	SSF48173	Cryptochrome/photolyase FAD-binding domain
YSA_06545	SSF52425	Cryptochrome/photolyase, N-terminal domain
YSA_06548	SSF46955	Putative DNA-binding domain
YSA_06553	SSF51905	FAD/NAD(P)-binding domain
YSA_06556	SSF51735	NAD(P)-binding Rossmann-fold domains
YSA_06557	SSF53800	Chelatase
YSA_06559	SSF53271	PRTase-like
YSA_06561	SSF53271	PRTase-like
YSA_06563	SSF51182	RmlC-like cupins
YSA_06568	SSF51905	FAD/NAD(P)-binding domain
YSA_06579	SSF69593	Glycerol-3-phosphate (1)-acyltransferase
YSA_06583	SSF143081	BB1717-like
YSA_06588	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
YSA_06589	SSF51735	NAD(P)-binding Rossmann-fold domains
YSA_06589	SSF52283	Formate/glycerate dehydrogenase catalytic domain-like
YSA_06592	SSF56801	Acetyl-CoA synthetase-like
YSA_06601	SSF46894	C-terminal effector domain of the bipartite response regulators
YSA_06601	SSF48452	TPR-like
YSA_06601	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_06602	SSF48452	TPR-like
YSA_06602	SSF52172	CheY-like
YSA_06603	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
YSA_06606	SSF56281	Metallo-hydrolase/oxidoreductase
YSA_06607	SSF103088	OmpA-like
YSA_06610	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_06610	SSF53659	Isocitrate/Isopropylmalate dehydrogenase-like
YSA_06610	SSF75138	HprK N-terminal domain-like
YSA_06612	SSF54534	FKBP-like
YSA_06615	SSF52833	Thioredoxin-like
YSA_06617	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
YSA_06619	SSF55785	PYP-like sensor domain (PAS domain)
YSA_06619	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
YSA_06637	SSF51905	FAD/NAD(P)-binding domain
YSA_06639	SSF51690	Nicotinate/Quinolinate PRTase C-terminal domain-like
YSA_06639	SSF54675	Nicotinate/Quinolinate PRTase N-terminal domain-like
YSA_06643	SSF55846	N-acetylmuramoyl-L-alanine amidase-like
YSA_06646	SSF51556	Metallo-dependent hydrolases
YSA_06648	SSF47413	lambda repressor-like DNA-binding domains
YSA_06648	SSF53822	Periplasmic binding protein-like I
YSA_06652	SSF47831	Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain
YSA_06652	SSF51621	Phosphoenolpyruvate/pyruvate domain
YSA_06652	SSF52009	Phosphohistidine domain
YSA_06652	SSF55594	HPr-like
YSA_06652	SSF55804	Phoshotransferase/anion transport protein
YSA_06653	SSF53613	Ribokinase-like
YSA_06656	SSF52794	PTS system IIB component-like
YSA_06659	SSF47240	Ferritin-like
YSA_06660	SSF55073	Nucleotide cyclase
YSA_06670	SSF50341	CheW-like
YSA_06670	SSF52172	CheY-like
YSA_06674	SSF111369	HlyD-like secretion proteins
YSA_06675	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_06675	SSF90123	ABC transporter transmembrane region
YSA_06676	SSF56954	Outer membrane efflux proteins (OEP)
YSA_06692	SSF51120	beta-Roll
YSA_06692	SSF63829	Calcium-dependent phosphotriesterase
YSA_06692	SSF75011	3-carboxy-cis,cis-mucoante lactonizing enzyme
YSA_06693	SSF46689	Homeodomain-like
YSA_06693	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_06693	SSF55781	GAF domain-like
YSA_06696	SSF46458	Globin-like
YSA_06696	SSF52343	Ferredoxin reductase-like, C-terminal NADP-linked domain
YSA_06696	SSF63380	Riboflavin synthase domain-like
YSA_06698	SSF158442	DsbB-like
YSA_06699	SSF49503	Cupredoxins
YSA_06699	SSF81464	Cytochrome c oxidase subunit II-like, transmembrane region
YSA_06700	SSF81442	Cytochrome c oxidase subunit I-like
YSA_06702	SSF81452	Cytochrome c oxidase subunit III-like
YSA_06706	SSF53383	PLP-dependent transferases
YSA_06712	SSF55729	Acyl-CoA N-acyltransferases (Nat)
YSA_06714	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
YSA_06714	SSF88946	Sigma2 domain of RNA polymerase sigma factors
YSA_06718	SSF56935	Porins
YSA_06723	SSF52821	Rhodanese/Cell cycle control phosphatase
YSA_06725	SSF55326	PurM N-terminal domain-like
YSA_06725	SSF56042	PurM C-terminal domain-like
YSA_06726	SSF53850	Periplasmic binding protein-like II
YSA_06729	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_06730	SSF161098	MetI-like
YSA_06731	SSF161098	MetI-like
YSA_06736	SSF47413	lambda repressor-like DNA-binding domains
YSA_06738	SSF55729	Acyl-CoA N-acyltransferases (Nat)
YSA_06740	SSF50494	Trypsin-like serine proteases
YSA_06744	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
YSA_06748	SSF51905	FAD/NAD(P)-binding domain
YSA_06751	SSF55298	YjgF-like
YSA_06754	SSF111337	QueA-like
YSA_06756	SSF51713	tRNA-guanine transglycosylase
YSA_06758	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
YSA_06760	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
YSA_06765	SSF56655	Carbohydrate phosphatase
YSA_06766	SSF75217	alpha/beta knot
YSA_06767	SSF51161	Trimeric LpxA-like enzymes
YSA_06769	SSF46785	"Winged helix" DNA-binding domain
YSA_06770	SSF53383	PLP-dependent transferases
YSA_06772	SSF82649	SufE/NifU
YSA_06774	SSF89360	HesB-like domain
YSA_06776	SSF46565	Chaperone J-domain
YSA_06776	SSF47144	HSC20 (HSCB), C-terminal oligomerisation domain
YSA_06779	SSF100920	Heat shock protein 70kD (HSP70), peptide-binding domain
YSA_06779	SSF100934	Heat shock protein 70kD (HSP70), C-terminal subdomain
YSA_06779	SSF53067	Actin-like ATPase domain
YSA_06780	SSF54292	2Fe-2S ferredoxin-like
YSA_06782	SSF140319	IscX-like
YSA_06783	SSF54919	Nucleoside diphosphate kinase, NDK
YSA_06785	SSF102114	Radical SAM enzymes
YSA_06787	SSF48452	TPR-like
YSA_06788	SSF47413	lambda repressor-like DNA-binding domains
YSA_06789	SSF51412	Inosine monophosphate dehydrogenase (IMPDH)
YSA_06789	SSF56014	Nitrite and sulphite reductase 4Fe-4S domain-like
YSA_06791	SSF52954	Class II aaRS ABD-related
YSA_06791	SSF55681	Class II aaRS and biotin synthetases
YSA_06793	SSF48452	TPR-like
YSA_06794	SSF50998	Quinoprotein alcohol dehydrogenase-like
YSA_06796	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_06800	SSF53383	PLP-dependent transferases
YSA_06801	SSF56317	Carbon-nitrogen hydrolase
YSA_06804	SSF52218	Flavoproteins
YSA_06804	SSF52343	Ferredoxin reductase-like, C-terminal NADP-linked domain
YSA_06804	SSF63380	Riboflavin synthase domain-like
YSA_06807	SSF56935	Porins
YSA_06809	SSF51197	Clavaminate synthase-like
YSA_06810	SSF81901	HCP-like
YSA_06812	SSF50621	Alanine racemase C-terminal domain-like
YSA_06812	SSF51419	PLP-binding barrel
YSA_06814	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
YSA_06814	SSF88946	Sigma2 domain of RNA polymerase sigma factors
YSA_06818	SSF56935	Porins
YSA_06819	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_06819	SSF54631	CBS-domain pair
YSA_06821	SSF161098	MetI-like
YSA_06823	SSF53850	Periplasmic binding protein-like II
YSA_06825	SSF161098	MetI-like
YSA_06826	SSF50447	Translation proteins
YSA_06826	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_06826	SSF54980	EF-G C-terminal domain-like
YSA_06828	SSF53850	Periplasmic binding protein-like II
YSA_06830	SSF51182	RmlC-like cupins
YSA_06831	SSF51905	FAD/NAD(P)-binding domain
YSA_06833	SSF46689	Homeodomain-like
YSA_06833	SSF54427	NTF2-like
YSA_06848	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_06849	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_06851	SSF161098	MetI-like
YSA_06852	SSF161098	MetI-like
YSA_06856	SSF53850	Periplasmic binding protein-like II
YSA_06860	SSF53850	Periplasmic binding protein-like II
YSA_06862	SSF53850	Periplasmic binding protein-like II
YSA_06868	SSF47384	Homodimeric domain of signal transducing histidine kinase
YSA_06868	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
YSA_06869	SSF52172	CheY-like
YSA_06871	SSF56601	beta-lactamase/transpeptidase-like
YSA_06875	SSF101874	YceI-like
YSA_06877	SSF56024	Phospholipase D/nuclease
YSA_06878	SSF52317	Class I glutamine amidotransferase-like
YSA_06880	SSF54427	NTF2-like
YSA_06882	SSF55729	Acyl-CoA N-acyltransferases (Nat)
YSA_06883	SSF56317	Carbon-nitrogen hydrolase
YSA_06885	SSF117457	FumA C-terminal domain-like
YSA_06893	SSF52343	Ferredoxin reductase-like, C-terminal NADP-linked domain
YSA_06893	SSF54292	2Fe-2S ferredoxin-like
YSA_06893	SSF63380	Riboflavin synthase domain-like
YSA_06894	SSF48317	Acid phosphatase/Vanadium-dependent haloperoxidase
YSA_06895	SSF52172	CheY-like
YSA_06898	SSF47384	Homodimeric domain of signal transducing histidine kinase
YSA_06898	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
YSA_06900	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
YSA_06902	SSF56112	Protein kinase-like (PK-like)
YSA_06905	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
YSA_06905	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
YSA_06905	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
YSA_06907	SSF111369	HlyD-like secretion proteins
YSA_06908	SSF50969	YVTN repeat-like/Quinoprotein amine dehydrogenase
YSA_06914	SSF46626	Cytochrome c
YSA_06917	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
YSA_06922	SSF141868	EAL domain-like
YSA_06922	SSF55073	Nucleotide cyclase
YSA_06924	SSF46609	Fe,Mn superoxide dismutase (SOD), N-terminal domain
YSA_06924	SSF54719	Fe,Mn superoxide dismutase (SOD), C-terminal domain
YSA_06931	SSF46785	"Winged helix" DNA-binding domain
YSA_06931	SSF53850	Periplasmic binding protein-like II
YSA_06933	SSF51735	NAD(P)-binding Rossmann-fold domains
YSA_06939	SSF46785	"Winged helix" DNA-binding domain
YSA_06941	SSF51395	FMN-linked oxidoreductases
YSA_06944	SSF69593	Glycerol-3-phosphate (1)-acyltransferase
YSA_06945	SSF55729	Acyl-CoA N-acyltransferases (Nat)
YSA_06947	SSF56645	Acyl-CoA dehydrogenase NM domain-like
YSA_06954	SSF50685	Barwin-like endoglucanases
YSA_06956	SSF55931	Glutamine synthetase/guanido kinase
YSA_06956	SSF89095	GatB/YqeY motif
YSA_06957	SSF75304	Amidase signature (AS) enzymes
YSA_06958	SSF141000	Glu-tRNAGln amidotransferase C subunit
YSA_06960	SSF53067	Actin-like ATPase domain
YSA_06965	SSF52972	ITPase-like
YSA_06967	SSF50249	Nucleic acid-binding proteins
YSA_06973	SSF56317	Carbon-nitrogen hydrolase
YSA_06974	SSF111283	Putative modulator of DNA gyrase, PmbA/TldD
YSA_06976	SSF158710	PSPTO4464-like
YSA_06977	SSF111283	Putative modulator of DNA gyrase, PmbA/TldD
YSA_06982	SSF48557	L-aspartase-like
YSA_06984	SSF48452	TPR-like
YSA_06985	SSF46609	Fe,Mn superoxide dismutase (SOD), N-terminal domain
YSA_06985	SSF54719	Fe,Mn superoxide dismutase (SOD), C-terminal domain
YSA_06988	SSF55594	HPr-like
YSA_06990	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_06991	SSF55804	Phoshotransferase/anion transport protein
YSA_06992	SSF69754	Ribosome binding protein Y (YfiA homologue)
YSA_06996	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_07000	SSF56784	HAD-like
YSA_07001	SSF53697	SIS domain
YSA_07003	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_07012	SSF55205	EPT/RTPC-like
YSA_07014	SSF53850	Periplasmic binding protein-like II
YSA_07018	SSF53720	ALDH-like
YSA_07019	SSF53383	PLP-dependent transferases
YSA_07022	SSF53649	Alkaline phosphatase-like
YSA_07025	SSF46785	"Winged helix" DNA-binding domain
YSA_07025	SSF48008	GntR ligand-binding domain-like
YSA_07026	SSF103473	MFS general substrate transporter
YSA_07027	SSF54427	NTF2-like
YSA_07034	SSF47729	IHF-like DNA-binding proteins
YSA_07036	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
YSA_07038	SSF46589	tRNA-binding arm
YSA_07038	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
YSA_07038	SSF50677	ValRS/IleRS/LeuRS editing domain
YSA_07038	SSF52374	Nucleotidylyl transferase
YSA_07042	SSF102400	DNA polymerase III chi subunit
YSA_07045	SSF52949	Macro domain-like
YSA_07045	SSF53187	Zn-dependent exopeptidases
YSA_07053	SSF50249	Nucleic acid-binding proteins
YSA_07056	SSF101790	Aminomethyltransferase beta-barrel domain
YSA_07056	SSF103025	Folate-binding domain
YSA_07058	SSF143548	Serine metabolism enzymes domain
YSA_07060	SSF53383	PLP-dependent transferases
YSA_07061	SSF51230	Single hybrid motif
YSA_07066	SSF51658	Xylose isomerase-like
YSA_07073	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
YSA_07073	SSF88946	Sigma2 domain of RNA polymerase sigma factors
YSA_07076	SSF46689	Homeodomain-like
YSA_07076	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_07076	SSF55785	PYP-like sensor domain (PAS domain)
YSA_07079	SSF53633	Carbamate kinase-like
YSA_07081	SSF53671	Aspartate/ornithine carbamoyltransferase
YSA_07082	SSF55909	Pentein
YSA_07091	SSF48613	Heme oxygenase-like
YSA_07092	SSF56935	Porins
YSA_07096	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
YSA_07096	SSF88946	Sigma2 domain of RNA polymerase sigma factors
YSA_07098	SSF51735	NAD(P)-binding Rossmann-fold domains
YSA_07098	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
YSA_07100	SSF143975	IlvD/EDD N-terminal domain-like
YSA_07100	SSF52016	LeuD/IlvD-like
YSA_07102	SSF53067	Actin-like ATPase domain
YSA_07104	SSF46894	C-terminal effector domain of the bipartite response regulators
YSA_07104	SSF52172	CheY-like
YSA_07107	SSF47384	Homodimeric domain of signal transducing histidine kinase
YSA_07107	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
YSA_07108	SSF48208	Six-hairpin glycosidases
YSA_07110	SSF53850	Periplasmic binding protein-like II
YSA_07112	SSF161098	MetI-like
YSA_07114	SSF161098	MetI-like
YSA_07115	SSF50331	MOP-like
YSA_07115	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_07119	SSF74650	Galactose mutarotase-like
YSA_07121	SSF46689	Homeodomain-like
YSA_07121	SSF53697	SIS domain
YSA_07124	SSF51735	NAD(P)-binding Rossmann-fold domains
YSA_07124	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
YSA_07125	SSF100950	NagB/RpiA/CoA transferase-like
YSA_07127	SSF51569	Aldolase
YSA_07132	SSF110921	2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain
YSA_07132	SSF51569	Aldolase
YSA_07132	SSF89000	post-HMGL domain-like
YSA_07136	SSF51261	Duplicated hybrid motif
YSA_07139	SSF46785	"Winged helix" DNA-binding domain
YSA_07139	SSF53850	Periplasmic binding protein-like II
YSA_07145	SSF51412	Inosine monophosphate dehydrogenase (IMPDH)
YSA_07145	SSF54631	CBS-domain pair
YSA_07147	SSF52317	Class I glutamine amidotransferase-like
YSA_07147	SSF52402	Adenine nucleotide alpha hydrolases-like
YSA_07147	SSF54810	GMP synthetase C-terminal dimerisation domain
YSA_07149	SSF101478	ADP-ribosylglycohydrolase
YSA_07151	SSF56399	ADP-ribosylation
YSA_07155	SSF49503	Cupredoxins
YSA_07156	SSF53927	Cytidine deaminase-like
YSA_07158	SSF53850	Periplasmic binding protein-like II
YSA_07158	SSF53955	Lysozyme-like
YSA_07161	SSF109736	FGAM synthase PurL, linker domain
YSA_07161	SSF52317	Class I glutamine amidotransferase-like
YSA_07161	SSF55326	PurM N-terminal domain-like
YSA_07161	SSF56042	PurM C-terminal domain-like
YSA_07161	SSF82697	PurS-like
YSA_07162	SSF102705	NIF3 (NGG1p interacting factor 3)-like
YSA_07168	SSF158544	GspK insert domain-like
YSA_07170	SSF101898	NHL repeat
YSA_07174	SSF56300	Metallo-dependent phosphatases
YSA_07178	SSF160246	EspE N-terminal domain-like
YSA_07178	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_07181	SSF54523	Pili subunits
YSA_07183	SSF54523	Pili subunits
YSA_07184	SSF54523	Pili subunits
YSA_07186	SSF53067	Actin-like ATPase domain
YSA_07193	SSF63380	Riboflavin synthase domain-like
YSA_07194	SSF46785	"Winged helix" DNA-binding domain
YSA_07198	SSF53955	Lysozyme-like
YSA_07198	SSF56601	beta-lactamase/transpeptidase-like
YSA_07201	SSF51395	FMN-linked oxidoreductases
YSA_07203	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_07204	SSF55811	Nudix
YSA_07206	SSF46785	"Winged helix" DNA-binding domain
YSA_07206	SSF53850	Periplasmic binding protein-like II
YSA_07208	SSF53474	alpha/beta-Hydrolases
YSA_07212	SSF46689	Homeodomain-like
YSA_07212	SSF52172	CheY-like
YSA_07212	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_07214	SSF103190	Sensory domain-like
YSA_07214	SSF47384	Homodimeric domain of signal transducing histidine kinase
YSA_07214	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
YSA_07216	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_07217	SSF161098	MetI-like
YSA_07218	SSF161098	MetI-like
YSA_07221	SSF53850	Periplasmic binding protein-like II
YSA_07222	SSF52058	L domain-like
YSA_07224	SSF51905	FAD/NAD(P)-binding domain
YSA_07225	SSF100950	NagB/RpiA/CoA transferase-like
YSA_07225	SSF46785	"Winged helix" DNA-binding domain
YSA_07227	SSF53067	Actin-like ATPase domain
YSA_07229	SSF81338	Aquaporin-like
YSA_07231	SSF55826	YbaK/ProRS associated domain
YSA_07233	SSF50331	MOP-like
YSA_07233	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_07234	SSF53671	Aspartate/ornithine carbamoyltransferase
YSA_07238	SSF50692	ADC-like
YSA_07238	SSF53706	Formate dehydrogenase/DMSO reductase, domains 1-3
YSA_07240	SSF52833	Thioredoxin-like
YSA_07242	SSF47240	Ferritin-like
YSA_07248	SSF52833	Thioredoxin-like
YSA_07253	SSF53098	Ribonuclease H-like
YSA_07254	SSF51556	Metallo-dependent hydrolases
YSA_07256	SSF103088	OmpA-like
YSA_07257	SSF52402	Adenine nucleotide alpha hydrolases-like
YSA_07257	SSF69864	Argininosuccinate synthetase, C-terminal domain
YSA_07262	SSF52172	CheY-like
YSA_07266	SSF48150	DNA-glycosylase
YSA_07273	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
YSA_07273	SSF50249	Nucleic acid-binding proteins
YSA_07273	SSF52374	Nucleotidylyl transferase
YSA_07273	SSF57770	Methionyl-tRNA synthetase (MetRS), Zn-domain
YSA_07275	SSF117916	Fe-S cluster assembly (FSCA) domain-like
YSA_07275	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_07278	SSF50249	Nucleic acid-binding proteins
YSA_07280	SSF51283	dUTPase-like
YSA_07282	SSF56300	Metallo-dependent phosphatases
YSA_07285	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_07287	SSF53187	Zn-dependent exopeptidases
YSA_07288	SSF50249	Nucleic acid-binding proteins
YSA_07288	SSF56091	DNA ligase/mRNA capping enzyme, catalytic domain
YSA_07289	SSF56281	Metallo-hydrolase/oxidoreductase
YSA_07291	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
YSA_07293	SSF46785	"Winged helix" DNA-binding domain
YSA_07293	SSF53383	PLP-dependent transferases
YSA_07294	SSF51161	Trimeric LpxA-like enzymes
YSA_07295	SSF50447	Translation proteins
YSA_07295	SSF55186	ThrRS/AlaRS common domain
YSA_07296	SSF103473	MFS general substrate transporter
YSA_07298	SSF53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes
YSA_07300	SSF117070	LEA14-like
YSA_07301	SSF103642	Sec-C motif
YSA_07301	SSF54427	NTF2-like
YSA_07305	SSF103088	OmpA-like
YSA_07305	SSF103647	TSP type-3 repeat
YSA_07306	SSF103088	OmpA-like
YSA_07306	SSF103647	TSP type-3 repeat
YSA_07312	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_07314	SSF51445	(Trans)glycosidases
YSA_07316	SSF56601	beta-lactamase/transpeptidase-like
YSA_07319	SSF103088	OmpA-like
YSA_07320	SSF50475	FMN-binding split barrel
YSA_07328	SSF51905	FAD/NAD(P)-binding domain
YSA_07330	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_07331	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_07338	SSF53822	Periplasmic binding protein-like I
YSA_07349	SSF141868	EAL domain-like
YSA_07349	SSF55073	Nucleotide cyclase
YSA_07354	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_07368	SSF111369	HlyD-like secretion proteins
YSA_07370	SSF160477	PA1123-like
YSA_07371	SSF141868	EAL domain-like
YSA_07371	SSF55073	Nucleotide cyclase
YSA_07371	SSF55785	PYP-like sensor domain (PAS domain)
YSA_07372	SSF55073	Nucleotide cyclase
YSA_07391	SSF52467	DHS-like NAD/FAD-binding domain
YSA_07391	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
YSA_07396	SSF56317	Carbon-nitrogen hydrolase
YSA_07400	SSF53774	Glutaminase/Asparaginase
YSA_07401	SSF101327	YgfB-like
YSA_07403	SSF47616	GST C-terminal domain-like
YSA_07403	SSF52833	Thioredoxin-like
YSA_07405	SSF50475	FMN-binding split barrel
YSA_07405	SSF52343	Ferredoxin reductase-like, C-terminal NADP-linked domain
YSA_07405	SSF54292	2Fe-2S ferredoxin-like
YSA_07405	SSF63380	Riboflavin synthase domain-like
YSA_07408	SSF46785	"Winged helix" DNA-binding domain
YSA_07408	SSF53850	Periplasmic binding protein-like II
YSA_07410	SSF74650	Galactose mutarotase-like
YSA_07411	SSF103481	Multidrug resistance efflux transporter EmrE
YSA_07419	SSF63829	Calcium-dependent phosphotriesterase
YSA_07420	SSF51735	NAD(P)-binding Rossmann-fold domains
YSA_07426	SSF143011	RelE-like
YSA_07431	SSF47240	Ferritin-like
YSA_07437	SSF48168	R1 subunit of ribonucleotide reductase, N-terminal domain
YSA_07437	SSF51998	PFL-like glycyl radical enzymes
YSA_07441	SSF46894	C-terminal effector domain of the bipartite response regulators
YSA_07441	SSF52172	CheY-like
YSA_07443	SSF158472	HAMP domain-like
YSA_07443	SSF47384	Homodimeric domain of signal transducing histidine kinase
YSA_07443	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
YSA_07446	SSF56214	4'-phosphopantetheinyl transferase
YSA_07447	SSF53474	alpha/beta-Hydrolases
YSA_07448	SSF56925	OMPA-like
YSA_07450	SSF52172	CheY-like
YSA_07452	SSF47384	Homodimeric domain of signal transducing histidine kinase
YSA_07452	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
YSA_07454	SSF118215	Proton glutamate symport protein
YSA_07456	SSF118196	YaeB-like
YSA_07459	SSF55120	Pseudouridine synthase
YSA_07459	SSF55174	Alpha-L RNA-binding motif
YSA_07460	SSF55729	Acyl-CoA N-acyltransferases (Nat)
YSA_07475	SSF102114	Radical SAM enzymes
YSA_07478	SSF53474	alpha/beta-Hydrolases
YSA_07480	SSF55729	Acyl-CoA N-acyltransferases (Nat)
YSA_07485	SSF100879	Lesion bypass DNA polymerase (Y-family), little finger domain
YSA_07485	SSF56672	DNA/RNA polymerases
YSA_07489	SSF52954	Class II aaRS ABD-related
YSA_07489	SSF55681	Class II aaRS and biotin synthetases
YSA_07489	SSF55826	YbaK/ProRS associated domain
YSA_07498	SSF54197	HIT-like
YSA_07502	SSF50249	Nucleic acid-binding proteins
YSA_07503	SSF47240	Ferritin-like
YSA_07507	SSF50249	Nucleic acid-binding proteins
YSA_07507	SSF55261	GAD domain-like
YSA_07507	SSF55681	Class II aaRS and biotin synthetases
YSA_07508	SSF75625	YebC-like
YSA_07510	SSF53098	Ribonuclease H-like
YSA_07512	SSF46929	DNA helicase RuvA subunit, C-terminal domain
YSA_07512	SSF47781	RuvA domain 2-like
YSA_07512	SSF50249	Nucleic acid-binding proteins
YSA_07513	SSF46785	"Winged helix" DNA-binding domain
YSA_07513	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_07517	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
YSA_07523	SSF74653	TolA/TonB C-terminal domain
YSA_07526	SSF52964	TolB, N-terminal domain
YSA_07526	SSF69304	Tricorn protease N-terminal domain
YSA_07528	SSF103088	OmpA-like
YSA_07529	SSF48452	TPR-like
YSA_07532	SSF102114	Radical SAM enzymes
YSA_07533	SSF52402	Adenine nucleotide alpha hydrolases-like
YSA_07536	SSF161111	Cation efflux protein transmembrane domain-like
YSA_07538	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
YSA_07550	SSF142754	NadA-like
YSA_07553	SSF48452	TPR-like
YSA_07554	SSF64307	SirA-like
YSA_07556	SSF52833	Thioredoxin-like
YSA_07558	SSF55021	ACT-like
YSA_07560	SSF51569	Aldolase
YSA_07563	SSF56281	Metallo-hydrolase/oxidoreductase
YSA_07564	SSF56104	SAICAR synthase-like
YSA_07570	SSF56349	DNA breaking-rejoining enzymes
YSA_07577	SSF46955	Putative DNA-binding domain
YSA_07580	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_07589	SSF51306	LexA/Signal peptidase
YSA_07591	SSF47413	lambda repressor-like DNA-binding domains
YSA_07596	SSF56747	Prim-pol domain
YSA_07605	SSF52096	ClpP/crotonase
YSA_07616	SSF160719	gpW/gp25-like
YSA_07621	SSF51126	Pectin lyase-like
YSA_07634	SSF69279	Phage tail proteins
YSA_07636	SSF53955	Lysozyme-like
YSA_07641	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
YSA_07668	SSF47413	lambda repressor-like DNA-binding domains
YSA_07687	SSF51905	FAD/NAD(P)-binding domain
YSA_07689	SSF46785	"Winged helix" DNA-binding domain
YSA_07690	SSF51395	FMN-linked oxidoreductases
YSA_07692	SSF51905	FAD/NAD(P)-binding domain
YSA_07692	SSF54373	FAD-linked reductases, C-terminal domain
YSA_07693	SSF53720	ALDH-like
YSA_07694	SSF51569	Aldolase
YSA_07696	SSF54506	Diaminopimelate epimerase-like
YSA_07700	SSF46689	Homeodomain-like
YSA_07700	SSF55785	PYP-like sensor domain (PAS domain)
YSA_07702	SSF46785	"Winged helix" DNA-binding domain
YSA_07702	SSF53850	Periplasmic binding protein-like II
YSA_07704	SSF53218	Molybdenum cofactor biosynthesis proteins
YSA_07706	SSF102114	Radical SAM enzymes
YSA_07710	SSF50692	ADC-like
YSA_07710	SSF53706	Formate dehydrogenase/DMSO reductase, domains 1-3
YSA_07713	SSF46785	"Winged helix" DNA-binding domain
YSA_07713	SSF54909	Dimeric alpha+beta barrel
YSA_07716	SSF53383	PLP-dependent transferases
YSA_07719	SSF53649	Alkaline phosphatase-like
YSA_07722	SSF47819	HRDC-like
YSA_07722	SSF53098	Ribonuclease H-like
YSA_07724	SSF160191	YcgL-like
YSA_07726	SSF51735	NAD(P)-binding Rossmann-fold domains
YSA_07728	SSF55469	FMN-dependent nitroreductase-like
YSA_07732	SSF75217	alpha/beta knot
YSA_07737	SSF50993	Peptidase/esterase 'gauge' domain
YSA_07737	SSF53474	alpha/beta-Hydrolases
YSA_07740	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
YSA_07744	SSF46785	"Winged helix" DNA-binding domain
YSA_07744	SSF53850	Periplasmic binding protein-like II
YSA_07747	SSF103473	MFS general substrate transporter
YSA_07749	SSF88713	Glycoside hydrolase/deacetylase
YSA_07750	SSF160467	PH0987 N-terminal domain-like
YSA_07750	SSF50891	Cyclophilin-like
YSA_07752	SSF50891	Cyclophilin-like
YSA_07756	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_07758	SSF53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes
YSA_07762	SSF51197	Clavaminate synthase-like
YSA_07765	SSF103481	Multidrug resistance efflux transporter EmrE
YSA_07768	SSF103481	Multidrug resistance efflux transporter EmrE
YSA_07775	SSF69047	Hypothetical protein YjbJ
YSA_07780	SSF56420	Peptide deformylase
YSA_07784	SSF54427	NTF2-like
YSA_07786	SSF54909	Dimeric alpha+beta barrel
YSA_07787	SSF55961	Bet v1-like
YSA_07789	SSF48452	TPR-like
YSA_07789	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
YSA_07789	SSF88946	Sigma2 domain of RNA polymerase sigma factors
YSA_07790	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
YSA_07791	SSF53474	alpha/beta-Hydrolases
YSA_07794	SSF56801	Acetyl-CoA synthetase-like
YSA_07799	SSF56801	Acetyl-CoA synthetase-like
YSA_07801	SSF51905	FAD/NAD(P)-binding domain
YSA_07803	SSF54368	Glutamine synthetase, N-terminal domain
YSA_07803	SSF55931	Glutamine synthetase/guanido kinase
YSA_07807	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_07809	SSF53901	Thiolase-like
YSA_07812	SSF56935	Porins
YSA_07815	SSF55729	Acyl-CoA N-acyltransferases (Nat)
YSA_07818	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_07818	SSF90123	ABC transporter transmembrane region
YSA_07820	SSF50891	Cyclophilin-like
YSA_07821	SSF53474	alpha/beta-Hydrolases
YSA_07823	SSF46785	"Winged helix" DNA-binding domain
YSA_07823	SSF53850	Periplasmic binding protein-like II
YSA_07824	SSF52218	Flavoproteins
YSA_07826	SSF103481	Multidrug resistance efflux transporter EmrE
YSA_07831	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_07831	SSF90123	ABC transporter transmembrane region
YSA_07839	SSF50182	Sm-like ribonucleoproteins
YSA_07841	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_07852	SSF103481	Multidrug resistance efflux transporter EmrE
YSA_07854	SSF103473	MFS general substrate transporter
YSA_07855	SSF46785	"Winged helix" DNA-binding domain
YSA_07855	SSF53850	Periplasmic binding protein-like II
YSA_07860	SSF52768	Arginase/deacetylase
YSA_07862	SSF46785	"Winged helix" DNA-binding domain
YSA_07862	SSF53850	Periplasmic binding protein-like II
YSA_07866	SSF55785	PYP-like sensor domain (PAS domain)
YSA_07866	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
YSA_07869	SSF56954	Outer membrane efflux proteins (OEP)
YSA_07873	SSF101327	YgfB-like
YSA_07875	SSF47819	HRDC-like
YSA_07875	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_07877	SSF46785	"Winged helix" DNA-binding domain
YSA_07878	SSF52151	FabD/lysophospholipase-like
YSA_07880	SSF52833	Thioredoxin-like
YSA_07882	SSF103481	Multidrug resistance efflux transporter EmrE
YSA_07884	SSF46689	Homeodomain-like
YSA_07884	SSF51182	RmlC-like cupins
YSA_07885	SSF56300	Metallo-dependent phosphatases
YSA_07891	SSF55469	FMN-dependent nitroreductase-like
YSA_07893	SSF158472	HAMP domain-like
YSA_07893	SSF47384	Homodimeric domain of signal transducing histidine kinase
YSA_07893	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
YSA_07896	SSF46894	C-terminal effector domain of the bipartite response regulators
YSA_07896	SSF52172	CheY-like
YSA_07897	SSF54909	Dimeric alpha+beta barrel
YSA_07900	SSF89550	PHP domain-like
YSA_07901	SSF55821	YrdC/RibB
YSA_07904	SSF46785	"Winged helix" DNA-binding domain
YSA_07906	SSF55120	Pseudouridine synthase
YSA_07906	SSF55174	Alpha-L RNA-binding motif
YSA_07911	SSF46785	"Winged helix" DNA-binding domain
YSA_07911	SSF53850	Periplasmic binding protein-like II
YSA_07913	SSF46548	alpha-helical ferredoxin
YSA_07913	SSF55103	FAD-linked oxidases, C-terminal domain
YSA_07913	SSF56176	FAD-binding/transporter-associated domain-like
YSA_07915	SSF103473	MFS general substrate transporter
YSA_07920	SSF55248	PCD-like
YSA_07921	SSF56534	Aromatic aminoacid monoxygenases, catalytic and oligomerization domains
YSA_07924	SSF46689	Homeodomain-like
YSA_07924	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_07924	SSF55021	ACT-like
YSA_07924	SSF55785	PYP-like sensor domain (PAS domain)
YSA_07927	SSF56801	Acetyl-CoA synthetase-like
YSA_07931	SSF53850	Periplasmic binding protein-like II
YSA_07933	SSF161098	MetI-like
YSA_07934	SSF161098	MetI-like
YSA_07936	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_07939	SSF46689	Homeodomain-like
YSA_07939	SSF52317	Class I glutamine amidotransferase-like
YSA_07941	SSF53383	PLP-dependent transferases
YSA_07943	SSF55729	Acyl-CoA N-acyltransferases (Nat)
YSA_07944	SSF55729	Acyl-CoA N-acyltransferases (Nat)
YSA_07946	SSF53720	ALDH-like
YSA_07947	SSF55909	Pentein
YSA_07951	SSF53187	Zn-dependent exopeptidases
YSA_07953	SSF101353	Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS)
YSA_07953	SSF50447	Translation proteins
YSA_07953	SSF55186	ThrRS/AlaRS common domain
YSA_07953	SSF55681	Class II aaRS and biotin synthetases
YSA_07955	SSF53633	Carbamate kinase-like
YSA_07955	SSF55021	ACT-like
YSA_07957	SSF117130	CsrA-like
YSA_07966	SSF158791	MgtE N-terminal domain-like
YSA_07966	SSF161093	MgtE membrane domain-like
YSA_07966	SSF54631	CBS-domain pair
YSA_07969	SSF47598	Ribbon-helix-helix
YSA_07974	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_07985	SSF55073	Nucleotide cyclase
YSA_07985	SSF55785	PYP-like sensor domain (PAS domain)
YSA_07988	SSF51905	FAD/NAD(P)-binding domain
YSA_07988	SSF55424	FAD/NAD-linked reductases, dimerisation (C-terminal) domain
YSA_07990	SSF47005	Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex
YSA_07990	SSF51230	Single hybrid motif
YSA_07990	SSF52777	CoA-dependent acyltransferases
YSA_07992	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
YSA_07992	SSF52922	TK C-terminal domain-like
YSA_07994	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
YSA_07996	SSF46785	"Winged helix" DNA-binding domain
YSA_07996	SSF54909	Dimeric alpha+beta barrel
YSA_07998	SSF54368	Glutamine synthetase, N-terminal domain
YSA_07998	SSF55931	Glutamine synthetase/guanido kinase
YSA_08001	SSF103473	MFS general substrate transporter
YSA_08003	SSF141371	PilZ domain-like
YSA_08008	SSF140566	FlgN-like
YSA_08009	SSF101498	Anti-sigma factor FlgM
YSA_08016	SSF50341	CheW-like
YSA_08016	SSF52172	CheY-like
YSA_08017	SSF47757	Chemotaxis receptor methyltransferase CheR, N-terminal domain
YSA_08017	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
YSA_08026	SSF117143	Flagellar hook protein flgE
YSA_08032	SSF117143	Flagellar hook protein flgE
YSA_08034	SSF117143	Flagellar hook protein flgE
YSA_08042	SSF64518	Phase 1 flagellin
YSA_08046	SSF64518	Phase 1 flagellin
YSA_08049	SSF53448	Nucleotide-diphospho-sugar transferases
YSA_08049	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
YSA_08051	SSF53448	Nucleotide-diphospho-sugar transferases
YSA_08053	SSF53448	Nucleotide-diphospho-sugar transferases
YSA_08054	SSF51735	NAD(P)-binding Rossmann-fold domains
YSA_08055	SSF53383	PLP-dependent transferases
YSA_08057	SSF53448	Nucleotide-diphospho-sugar transferases
YSA_08057	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
YSA_08060	SSF51569	Aldolase
YSA_08062	SSF52467	DHS-like NAD/FAD-binding domain
YSA_08062	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
YSA_08063	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
YSA_08064	SSF51735	NAD(P)-binding Rossmann-fold domains
YSA_08066	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
YSA_08068	SSF53901	Thiolase-like
YSA_08069	SSF64518	Phase 1 flagellin
YSA_08071	SSF160214	FlaG-like
YSA_08075	SSF101116	Flagellar export chaperone FliS
YSA_08079	SSF46689	Homeodomain-like
YSA_08079	SSF52172	CheY-like
YSA_08079	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_08082	SSF47384	Homodimeric domain of signal transducing histidine kinase
YSA_08082	SSF55785	PYP-like sensor domain (PAS domain)
YSA_08082	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
YSA_08084	SSF46689	Homeodomain-like
YSA_08084	SSF52172	CheY-like
YSA_08084	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_08090	SSF48029	FliG
YSA_08091	SSF160527	V-type ATPase subunit E-like
YSA_08093	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_08096	SSF52091	SpoIIaa-like
YSA_08097	SSF52172	CheY-like
YSA_08097	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
YSA_08097	SSF81606	PP2C-like
YSA_08098	SSF47226	Histidine-containing phosphotransfer domain, HPT domain
YSA_08105	SSF101801	Surface presentation of antigens (SPOA)
YSA_08105	SSF103039	CheC-like
YSA_08106	SSF101801	Surface presentation of antigens (SPOA)
YSA_08114	SSF160544	EscU C-terminal domain-like
YSA_08119	SSF52440	PreATP-grasp domain
YSA_08119	SSF56059	Glutathione synthetase ATP-binding domain-like
YSA_08121	SSF53383	PLP-dependent transferases
YSA_08126	SSF53383	PLP-dependent transferases
YSA_08131	SSF102114	Radical SAM enzymes
YSA_08133	SSF52440	PreATP-grasp domain
YSA_08133	SSF56059	Glutathione synthetase ATP-binding domain-like
YSA_08136	SSF46785	"Winged helix" DNA-binding domain
YSA_08136	SSF48008	GntR ligand-binding domain-like
YSA_08140	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_08143	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_08144	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
YSA_08144	SSF88946	Sigma2 domain of RNA polymerase sigma factors
YSA_08145	SSF52172	CheY-like
YSA_08147	SSF75708	Chemotaxis phosphatase CheZ
YSA_08150	SSF47226	Histidine-containing phosphotransfer domain, HPT domain
YSA_08150	SSF47384	Homodimeric domain of signal transducing histidine kinase
YSA_08150	SSF50341	CheW-like
YSA_08150	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
YSA_08153	SSF52172	CheY-like
YSA_08153	SSF52738	Methylesterase CheB, C-terminal domain
YSA_08157	SSF103088	OmpA-like
YSA_08160	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_08162	SSF50341	CheW-like
YSA_08164	SSF50341	CheW-like
YSA_08168	SSF53448	Nucleotide-diphospho-sugar transferases
YSA_08169	SSF160544	EscU C-terminal domain-like
YSA_08173	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_08179	SSF82093	Heme chaperone CcmE
YSA_08183	SSF52833	Thioredoxin-like
YSA_08188	SSF48452	TPR-like
YSA_08195	SSF51735	NAD(P)-binding Rossmann-fold domains
YSA_08195	SSF52283	Formate/glycerate dehydrogenase catalytic domain-like
YSA_08196	SSF54506	Diaminopimelate epimerase-like
YSA_08197	SSF51316	Mss4-like
YSA_08199	SSF54534	FKBP-like
YSA_08206	SSF51905	FAD/NAD(P)-binding domain
YSA_08206	SSF54373	FAD-linked reductases, C-terminal domain
YSA_08213	SSF46785	"Winged helix" DNA-binding domain
YSA_08216	SSF103481	Multidrug resistance efflux transporter EmrE
YSA_08218	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
YSA_08220	SSF50182	Sm-like ribonucleoproteins
YSA_08220	SSF82861	Mechanosensitive channel protein MscS (YggB), transmembrane region
YSA_08224	SSF103473	MFS general substrate transporter
YSA_08227	SSF53850	Periplasmic binding protein-like II
YSA_08229	SSF81324	Voltage-gated potassium channels
YSA_08234	SSF50800	PK beta-barrel domain-like
YSA_08234	SSF51621	Phosphoenolpyruvate/pyruvate domain
YSA_08234	SSF52935	PK C-terminal domain-like
YSA_08235	SSF82544	GckA/TtuD-like
YSA_08238	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
YSA_08238	SSF51735	NAD(P)-binding Rossmann-fold domains
YSA_08240	SSF51658	Xylose isomerase-like
YSA_08241	SSF52467	DHS-like NAD/FAD-binding domain
YSA_08241	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
YSA_08243	SSF143744	GlcG-like
YSA_08245	SSF46689	Homeodomain-like
YSA_08245	SSF48498	Tetracyclin repressor-like, C-terminal domain
YSA_08248	SSF111364	Tsx-like channel
YSA_08252	SSF111364	Tsx-like channel
YSA_08259	SSF51182	RmlC-like cupins
YSA_08261	SSF158694	UraD-Like
YSA_08263	SSF88713	Glycoside hydrolase/deacetylase
YSA_08265	SSF49472	Transthyretin (synonym: prealbumin)
YSA_08272	SSF46785	"Winged helix" DNA-binding domain
YSA_08272	SSF48008	GntR ligand-binding domain-like
YSA_08276	SSF81338	Aquaporin-like
YSA_08278	SSF51338	Composite domain of metallo-dependent hydrolases
YSA_08278	SSF51556	Metallo-dependent hydrolases
YSA_08279	SSF51735	NAD(P)-binding Rossmann-fold domains
YSA_08281	SSF54665	CO dehydrogenase molybdoprotein N-domain-like
YSA_08281	SSF56003	Molybdenum cofactor-binding domain
YSA_08283	SSF47741	CO dehydrogenase ISP C-domain like
YSA_08283	SSF54292	2Fe-2S ferredoxin-like
YSA_08283	SSF55447	CO dehydrogenase flavoprotein C-terminal domain-like
YSA_08283	SSF56176	FAD-binding/transporter-associated domain-like
YSA_08286	SSF46785	"Winged helix" DNA-binding domain
YSA_08286	SSF48008	GntR ligand-binding domain-like
YSA_08289	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_08289	SSF75553	Smc hinge domain
YSA_08291	SSF64383	Cell-division protein ZipA, C-terminal domain
YSA_08292	SSF47781	RuvA domain 2-like
YSA_08292	SSF50249	Nucleic acid-binding proteins
YSA_08292	SSF52113	BRCT domain
YSA_08292	SSF56091	DNA ligase/mRNA capping enzyme, catalytic domain
YSA_08295	SSF46955	Putative DNA-binding domain
YSA_08301	SSF53850	Periplasmic binding protein-like II
YSA_08305	SSF48019	post-AAA+ oligomerization domain-like
YSA_08305	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_08306	SSF82607	YbaB-like
YSA_08308	SSF111304	Recombination protein RecR
YSA_08311	SSF53271	PRTase-like
YSA_08313	SSF46785	"Winged helix" DNA-binding domain
YSA_08313	SSF51206	cAMP-binding domain-like
YSA_08315	SSF102114	Radical SAM enzymes
YSA_08319	SSF55008	HMA, heavy metal-associated domain
YSA_08319	SSF56784	HAD-like
YSA_08319	SSF81653	Calcium ATPase, transduction domain A
YSA_08319	SSF81665	Calcium ATPase, transmembrane domain M
YSA_08323	SSF54862	4Fe-4S ferredoxins
YSA_08324	SSF46626	Cytochrome c
YSA_08327	SSF46626	Cytochrome c
YSA_08329	SSF81442	Cytochrome c oxidase subunit I-like
YSA_08333	SSF46626	Cytochrome c
YSA_08335	SSF46626	Cytochrome c
YSA_08338	SSF81442	Cytochrome c oxidase subunit I-like
YSA_08339	SSF53474	alpha/beta-Hydrolases
YSA_08340	SSF51182	RmlC-like cupins
YSA_08341	SSF53098	Ribonuclease H-like
YSA_08344	SSF53850	Periplasmic binding protein-like II
YSA_08347	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
YSA_08347	SSF88946	Sigma2 domain of RNA polymerase sigma factors
YSA_08352	SSF47336	ACP-like
YSA_08352	SSF52777	CoA-dependent acyltransferases
YSA_08352	SSF56801	Acetyl-CoA synthetase-like
YSA_08354	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_08361	SSF52833	Thioredoxin-like
YSA_08361	SSF54423	DsbC/DsbG N-terminal domain-like
YSA_08362	SSF52833	Thioredoxin-like
YSA_08363	SSF52833	Thioredoxin-like
YSA_08363	SSF74863	Thiol:disulfide interchange protein DsbD, N-terminal domain (DsbD-alpha)
YSA_08365	SSF54665	CO dehydrogenase molybdoprotein N-domain-like
YSA_08365	SSF56003	Molybdenum cofactor-binding domain
YSA_08367	SSF47741	CO dehydrogenase ISP C-domain like
YSA_08367	SSF54292	2Fe-2S ferredoxin-like
YSA_08368	SSF46626	Cytochrome c
YSA_08372	SSF53448	Nucleotide-diphospho-sugar transferases
YSA_08379	SSF46894	C-terminal effector domain of the bipartite response regulators
YSA_08383	SSF47384	Homodimeric domain of signal transducing histidine kinase
YSA_08388	SSF52172	CheY-like
YSA_08389	SSF47384	Homodimeric domain of signal transducing histidine kinase
YSA_08389	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
YSA_08391	SSF53383	PLP-dependent transferases
YSA_08393	SSF51197	Clavaminate synthase-like
YSA_08393	SSF55718	SCP-like
YSA_08395	SSF53383	PLP-dependent transferases
YSA_08397	SSF51556	Metallo-dependent hydrolases
YSA_08399	SSF48056	Di-copper centre-containing domain
YSA_08400	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
YSA_08400	SSF88946	Sigma2 domain of RNA polymerase sigma factors
YSA_08403	SSF52172	CheY-like
YSA_08404	SSF103473	MFS general substrate transporter
YSA_08408	SSF47413	lambda repressor-like DNA-binding domains
YSA_08409	SSF51905	FAD/NAD(P)-binding domain
YSA_08409	SSF54373	FAD-linked reductases, C-terminal domain
YSA_08409	SSF54862	4Fe-4S ferredoxins
YSA_08414	SSF52402	Adenine nucleotide alpha hydrolases-like
YSA_08415	SSF52402	Adenine nucleotide alpha hydrolases-like
YSA_08415	SSF52467	DHS-like NAD/FAD-binding domain
YSA_08418	SSF53850	Periplasmic binding protein-like II
YSA_08420	SSF103088	OmpA-like
YSA_08421	SSF46785	"Winged helix" DNA-binding domain
YSA_08421	SSF53383	PLP-dependent transferases
YSA_08427	SSF55961	Bet v1-like
YSA_08431	SSF48256	Citrate synthase
YSA_08434	SSF81343	Fumarate reductase respiratory complex transmembrane subunits
YSA_08435	SSF81343	Fumarate reductase respiratory complex transmembrane subunits
YSA_08437	SSF46977	Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain
YSA_08437	SSF51905	FAD/NAD(P)-binding domain
YSA_08437	SSF56425	Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain
YSA_08439	SSF46548	alpha-helical ferredoxin
YSA_08439	SSF54292	2Fe-2S ferredoxin-like
YSA_08441	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
YSA_08442	SSF47005	Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex
YSA_08442	SSF51230	Single hybrid motif
YSA_08442	SSF52777	CoA-dependent acyltransferases
YSA_08443	SSF51905	FAD/NAD(P)-binding domain
YSA_08443	SSF55424	FAD/NAD-linked reductases, dimerisation (C-terminal) domain
YSA_08445	SSF52210	Succinyl-CoA synthetase domains
YSA_08445	SSF56059	Glutathione synthetase ATP-binding domain-like
YSA_08447	SSF51735	NAD(P)-binding Rossmann-fold domains
YSA_08447	SSF52210	Succinyl-CoA synthetase domains
YSA_08461	SSF47336	ACP-like
YSA_08461	SSF52777	CoA-dependent acyltransferases
YSA_08461	SSF56801	Acetyl-CoA synthetase-like
YSA_08462	SSF47336	ACP-like
YSA_08462	SSF56801	Acetyl-CoA synthetase-like
YSA_08465	SSF47336	ACP-like
YSA_08465	SSF52777	CoA-dependent acyltransferases
YSA_08465	SSF56801	Acetyl-CoA synthetase-like
YSA_08469	SSF47336	ACP-like
YSA_08469	SSF51197	Clavaminate synthase-like
YSA_08469	SSF52777	CoA-dependent acyltransferases
YSA_08469	SSF56801	Acetyl-CoA synthetase-like
YSA_08471	SSF47336	ACP-like
YSA_08471	SSF52777	CoA-dependent acyltransferases
YSA_08471	SSF56801	Acetyl-CoA synthetase-like
YSA_08475	SSF56935	Porins
YSA_08478	SSF56436	C-type lectin-like
YSA_08481	SSF47336	ACP-like
YSA_08481	SSF52777	CoA-dependent acyltransferases
YSA_08481	SSF53474	alpha/beta-Hydrolases
YSA_08481	SSF56801	Acetyl-CoA synthetase-like
YSA_08482	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_08482	SSF90123	ABC transporter transmembrane region
YSA_08485	SSF55729	Acyl-CoA N-acyltransferases (Nat)
YSA_08487	SSF56954	Outer membrane efflux proteins (OEP)
YSA_08490	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_08492	SSF111369	HlyD-like secretion proteins
YSA_08497	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
YSA_08498	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
YSA_08500	SSF110942	HSP90 C-terminal domain
YSA_08500	SSF54211	Ribosomal protein S5 domain 2-like
YSA_08500	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
YSA_08501	SSF53474	alpha/beta-Hydrolases
YSA_08503	SSF51182	RmlC-like cupins
YSA_08504	SSF51556	Metallo-dependent hydrolases
YSA_08506	SSF53901	Thiolase-like
YSA_08507	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
YSA_08510	SSF158472	HAMP domain-like
YSA_08510	SSF47384	Homodimeric domain of signal transducing histidine kinase
YSA_08510	SSF52172	CheY-like
YSA_08510	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
YSA_08512	SSF56935	Porins
YSA_08514	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
YSA_08514	SSF51735	NAD(P)-binding Rossmann-fold domains
YSA_08518	SSF53254	Phosphoglycerate mutase-like
YSA_08521	SSF53474	alpha/beta-Hydrolases
YSA_08523	SSF53474	alpha/beta-Hydrolases
YSA_08532	SSF56784	HAD-like
YSA_08532	SSF81653	Calcium ATPase, transduction domain A
YSA_08532	SSF81665	Calcium ATPase, transmembrane domain M
YSA_08538	SSF47384	Homodimeric domain of signal transducing histidine kinase
YSA_08538	SSF52402	Adenine nucleotide alpha hydrolases-like
YSA_08538	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_08538	SSF55781	GAF domain-like
YSA_08538	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
YSA_08541	SSF52172	CheY-like
YSA_08543	SSF46785	"Winged helix" DNA-binding domain
YSA_08543	SSF53850	Periplasmic binding protein-like II
YSA_08545	SSF53383	PLP-dependent transferases
YSA_08545	SSF56112	Protein kinase-like (PK-like)
YSA_08548	SSF56935	Porins
YSA_08550	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_08551	SSF161098	MetI-like
YSA_08554	SSF161098	MetI-like
YSA_08556	SSF53850	Periplasmic binding protein-like II
YSA_08558	SSF53850	Periplasmic binding protein-like II
YSA_08559	SSF53955	Lysozyme-like
YSA_08559	SSF54106	LysM domain
YSA_08562	SSF56281	Metallo-hydrolase/oxidoreductase
YSA_08563	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
YSA_08564	SSF53098	Ribonuclease H-like
YSA_08566	SSF53098	Ribonuclease H-like
YSA_08568	SSF53383	PLP-dependent transferases
YSA_08568	SSF55904	Ornithine decarboxylase C-terminal domain
YSA_08572	SSF52218	Flavoproteins
YSA_08574	SSF56935	Porins
YSA_08576	SSF46894	C-terminal effector domain of the bipartite response regulators
YSA_08595	SSF54862	4Fe-4S ferredoxins
YSA_08600	SSF53706	Formate dehydrogenase/DMSO reductase, domains 1-3
YSA_08600	SSF54292	2Fe-2S ferredoxin-like
YSA_08600	SSF54862	4Fe-4S ferredoxins
YSA_08602	SSF140490	Nqo1C-terminal domain-like
YSA_08602	SSF142019	Nqo1 FMN-binding domain-like
YSA_08602	SSF142984	Nqo1 middle domain-like
YSA_08603	SSF52833	Thioredoxin-like
YSA_08604	SSF143243	Nqo5-like
YSA_08604	SSF56762	HydB/Nqo4-like
YSA_08606	SSF56770	HydA/Nqo6-like
YSA_08612	SSF51621	Phosphoenolpyruvate/pyruvate domain
YSA_08617	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_08618	SSF52743	Subtilisin-like
YSA_08620	SSF52091	SpoIIaa-like
YSA_08623	SSF50447	Translation proteins
YSA_08623	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_08623	SSF54211	Ribosomal protein S5 domain 2-like
YSA_08623	SSF54980	EF-G C-terminal domain-like
YSA_08628	SSF53383	PLP-dependent transferases
YSA_08629	SSF46785	"Winged helix" DNA-binding domain
YSA_08629	SSF53850	Periplasmic binding protein-like II
YSA_08636	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
YSA_08637	SSF47616	GST C-terminal domain-like
YSA_08637	SSF52833	Thioredoxin-like
YSA_08644	SSF55729	Acyl-CoA N-acyltransferases (Nat)
YSA_08646	SSF47413	lambda repressor-like DNA-binding domains
YSA_08648	SSF46894	C-terminal effector domain of the bipartite response regulators
YSA_08648	SSF52172	CheY-like
YSA_08650	SSF46600	C-terminal UvrC-binding domain of UvrB
YSA_08650	SSF47781	RuvA domain 2-like
YSA_08650	SSF82771	GIY-YIG endonuclease
YSA_08654	SSF52833	Thioredoxin-like
YSA_08657	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
YSA_08661	SSF47413	lambda repressor-like DNA-binding domains
YSA_08661	SSF51306	LexA/Signal peptidase
YSA_08662	SSF47413	lambda repressor-like DNA-binding domains
YSA_08662	SSF51306	LexA/Signal peptidase
YSA_08663	SSF51230	Single hybrid motif
YSA_08663	SSF51246	Rudiment single hybrid motif
YSA_08663	SSF52440	PreATP-grasp domain
YSA_08663	SSF56059	Glutathione synthetase ATP-binding domain-like
YSA_08666	SSF52096	ClpP/crotonase
YSA_08667	SSF52096	ClpP/crotonase
YSA_08668	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
YSA_08668	SSF56645	Acyl-CoA dehydrogenase NM domain-like
YSA_08670	SSF56801	Acetyl-CoA synthetase-like
YSA_08674	SSF51445	(Trans)glycosidases
YSA_08677	SSF51011	Glycosyl hydrolase domain
YSA_08677	SSF51445	(Trans)glycosidases
YSA_08677	SSF56112	Protein kinase-like (PK-like)
YSA_08679	SSF51011	Glycosyl hydrolase domain
YSA_08679	SSF51445	(Trans)glycosidases
YSA_08679	SSF81296	E set domains
YSA_08680	SSF103515	Autotransporter
YSA_08685	SSF56219	DNase I-like
YSA_08687	SSF51011	Glycosyl hydrolase domain
YSA_08687	SSF51445	(Trans)glycosidases
YSA_08687	SSF81296	E set domains
YSA_08690	SSF51445	(Trans)glycosidases
YSA_08693	SSF51445	(Trans)glycosidases
YSA_08695	SSF51445	(Trans)glycosidases
YSA_08696	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
YSA_08701	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
YSA_08701	SSF51735	NAD(P)-binding Rossmann-fold domains
YSA_08703	SSF51735	NAD(P)-binding Rossmann-fold domains
YSA_08703	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
YSA_08705	SSF48208	Six-hairpin glycosidases
YSA_08706	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
YSA_08707	SSF46689	Homeodomain-like
YSA_08707	SSF48498	Tetracyclin repressor-like, C-terminal domain
YSA_08710	SSF51395	FMN-linked oxidoreductases
YSA_08710	SSF54862	4Fe-4S ferredoxins
YSA_08711	SSF46548	alpha-helical ferredoxin
YSA_08711	SSF51971	Nucleotide-binding domain
YSA_08712	SSF51338	Composite domain of metallo-dependent hydrolases
YSA_08712	SSF51556	Metallo-dependent hydrolases
YSA_08715	SSF53187	Zn-dependent exopeptidases
YSA_08715	SSF55031	Bacterial exopeptidase dimerisation domain
YSA_08716	SSF56281	Metallo-hydrolase/oxidoreductase
YSA_08718	SSF50814	Lipocalins
YSA_08722	SSF52096	ClpP/crotonase
YSA_08723	SSF55811	Nudix
YSA_08728	SSF53474	alpha/beta-Hydrolases
YSA_08730	SSF51905	FAD/NAD(P)-binding domain
YSA_08732	SSF56712	Prokaryotic type I DNA topoisomerase
YSA_08734	SSF55729	Acyl-CoA N-acyltransferases (Nat)
YSA_08736	SSF51197	Clavaminate synthase-like
YSA_08737	SSF48557	L-aspartase-like
YSA_08739	SSF101322	YcfC-like
YSA_08741	SSF52402	Adenine nucleotide alpha hydrolases-like
YSA_08742	SSF55811	Nudix
YSA_08745	SSF53659	Isocitrate/Isopropylmalate dehydrogenase-like
YSA_08749	SSF53659	Isocitrate/Isopropylmalate dehydrogenase-like
YSA_08750	SSF50249	Nucleic acid-binding proteins
YSA_08754	SSF54736	ClpS-like
YSA_08755	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_08755	SSF81923	Double Clp-N motif
YSA_08756	SSF50249	Nucleic acid-binding proteins
YSA_08761	SSF55729	Acyl-CoA N-acyltransferases (Nat)
YSA_08762	SSF55729	Acyl-CoA N-acyltransferases (Nat)
YSA_08766	SSF46785	"Winged helix" DNA-binding domain
YSA_08766	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_08768	SSF89392	Prokaryotic lipoproteins and lipoprotein localization factors
YSA_08770	SSF48019	post-AAA+ oligomerization domain-like
YSA_08770	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_08774	SSF46589	tRNA-binding arm
YSA_08774	SSF55681	Class II aaRS and biotin synthetases
YSA_08776	SSF51735	NAD(P)-binding Rossmann-fold domains
YSA_08776	SSF53790	Tetrapyrrole methylase
YSA_08776	SSF75615	Siroheme synthase middle domains-like
YSA_08779	SSF47616	GST C-terminal domain-like
YSA_08779	SSF52833	Thioredoxin-like
YSA_08781	SSF47648	Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain
YSA_08781	SSF52418	Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain
YSA_08783	SSF69721	DsrC, the gamma subunit of dissimilatory sulfite reductase
YSA_08785	SSF75169	DsrEFH-like
YSA_08786	SSF75169	DsrEFH-like
YSA_08789	SSF75169	DsrEFH-like
YSA_08802	SSF51735	NAD(P)-binding Rossmann-fold domains
YSA_08804	SSF46785	"Winged helix" DNA-binding domain
YSA_08804	SSF53850	Periplasmic binding protein-like II
YSA_08807	SSF51649	RuBisCo, C-terminal domain
YSA_08807	SSF54966	RuBisCO, large subunit, small (N-terminal) domain
YSA_08808	SSF142764	YgbK-like
YSA_08811	SSF103473	MFS general substrate transporter
YSA_08814	SSF50800	PK beta-barrel domain-like
YSA_08814	SSF51621	Phosphoenolpyruvate/pyruvate domain
YSA_08814	SSF52935	PK C-terminal domain-like
YSA_08818	SSF51604	Enolase C-terminal domain-like
YSA_08818	SSF54826	Enolase N-terminal domain-like
YSA_08821	SSF53649	Alkaline phosphatase-like
YSA_08821	SSF64158	2,3-Bisphosphoglycerate-independent phosphoglycerate mutase, substrate-binding domain
YSA_08823	SSF55331	Tautomerase/MIF
YSA_08824	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
YSA_08827	SSF46785	"Winged helix" DNA-binding domain
YSA_08830	SSF46785	"Winged helix" DNA-binding domain
YSA_08830	SSF53850	Periplasmic binding protein-like II
YSA_08832	SSF51735	NAD(P)-binding Rossmann-fold domains
YSA_08833	SSF47616	GST C-terminal domain-like
YSA_08833	SSF52833	Thioredoxin-like
YSA_08839	SSF49998	Amine oxidase catalytic domain
YSA_08839	SSF54416	Amine oxidase N-terminal region
YSA_08839	SSF55383	Copper amine oxidase, domain N
YSA_08842	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_08842	SSF90002	Hypothetical protein YjiA, C-terminal domain
YSA_08844	SSF51338	Composite domain of metallo-dependent hydrolases
YSA_08844	SSF51556	Metallo-dependent hydrolases
YSA_08848	SSF46689	Homeodomain-like
YSA_08856	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
YSA_08857	SSF51430	NAD(P)-linked oxidoreductase
YSA_08862	SSF46785	"Winged helix" DNA-binding domain
YSA_08872	SSF47413	lambda repressor-like DNA-binding domains
YSA_08892	SSF46689	Homeodomain-like
YSA_08894	SSF53098	Ribonuclease H-like
YSA_08904	SSF103473	MFS general substrate transporter
YSA_08906	SSF46689	Homeodomain-like
YSA_08908	SSF81340	Clc chloride channel
YSA_08918	SSF100950	NagB/RpiA/CoA transferase-like
YSA_08920	SSF100950	NagB/RpiA/CoA transferase-like
YSA_08923	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
YSA_08928	SSF63829	Calcium-dependent phosphotriesterase
YSA_08930	SSF51735	NAD(P)-binding Rossmann-fold domains
YSA_08931	SSF56935	Porins
YSA_08935	SSF51604	Enolase C-terminal domain-like
YSA_08935	SSF54826	Enolase N-terminal domain-like
YSA_08937	SSF53850	Periplasmic binding protein-like II
YSA_08939	SSF161098	MetI-like
YSA_08941	SSF53850	Periplasmic binding protein-like II
YSA_08943	SSF161098	MetI-like
YSA_08944	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_08946	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_08947	SSF49265	Fibronectin type III
YSA_08947	SSF51126	Pectin lyase-like
YSA_08949	SSF46785	"Winged helix" DNA-binding domain
YSA_08949	SSF48008	GntR ligand-binding domain-like
YSA_08951	SSF46785	"Winged helix" DNA-binding domain
YSA_08951	SSF48008	GntR ligand-binding domain-like
YSA_08956	SSF46689	Homeodomain-like
YSA_08956	SSF48498	Tetracyclin repressor-like, C-terminal domain
YSA_08959	SSF46626	Cytochrome c
YSA_08959	SSF54665	CO dehydrogenase molybdoprotein N-domain-like
YSA_08959	SSF56003	Molybdenum cofactor-binding domain
YSA_08961	SSF47741	CO dehydrogenase ISP C-domain like
YSA_08961	SSF54292	2Fe-2S ferredoxin-like
YSA_08962	SSF46785	"Winged helix" DNA-binding domain
YSA_08963	SSF144052	Thermophilic metalloprotease-like
YSA_08966	SSF51905	FAD/NAD(P)-binding domain
YSA_08966	SSF54373	FAD-linked reductases, C-terminal domain
YSA_08969	SSF53474	alpha/beta-Hydrolases
YSA_08973	SSF52499	Isochorismatase-like hydrolases
YSA_08975	SSF103473	MFS general substrate transporter
YSA_08987	SSF46785	"Winged helix" DNA-binding domain
YSA_08987	SSF53850	Periplasmic binding protein-like II
YSA_08990	SSF55073	Nucleotide cyclase
YSA_08992	SSF116726	TrkA C-terminal domain-like
YSA_09001	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
YSA_09002	SSF51735	NAD(P)-binding Rossmann-fold domains
YSA_09004	SSF56112	Protein kinase-like (PK-like)
YSA_09008	SSF55718	SCP-like
YSA_09009	SSF53254	Phosphoglycerate mutase-like
YSA_09011	SSF52096	ClpP/crotonase
YSA_09014	SSF56349	DNA breaking-rejoining enzymes
YSA_09047	SSF46894	C-terminal effector domain of the bipartite response regulators
YSA_09056	SSF46689	Homeodomain-like
YSA_09065	SSF50494	Trypsin-like serine proteases
YSA_09070	SSF47413	lambda repressor-like DNA-binding domains
YSA_09070	SSF51306	LexA/Signal peptidase
YSA_09082	SSF48024	N-terminal domain of DnaB helicase
YSA_09082	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_09088	SSF56349	DNA breaking-rejoining enzymes
YSA_09091	SSF57938	DnaJ/Hsp40 cysteine-rich domain
YSA_09094	SSF56925	OMPA-like
YSA_09110	SSF52096	ClpP/crotonase
YSA_09112	SSF56563	Major capsid protein gp5
YSA_09132	SSF102712	JAB1/MPN domain
YSA_09132	SSF54001	Cysteine proteinases
YSA_09150	SSF53955	Lysozyme-like
YSA_09172	SSF56349	DNA breaking-rejoining enzymes
YSA_09175	SSF158668	MtlR-like
YSA_09177	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
YSA_09200	SSF52980	Restriction endonuclease-like
YSA_09209	SSF46689	Homeodomain-like
YSA_09211	SSF53098	Ribonuclease H-like
YSA_09216	SSF52499	Isochorismatase-like hydrolases
YSA_09221	SSF51735	NAD(P)-binding Rossmann-fold domains
YSA_09222	SSF46955	Putative DNA-binding domain
YSA_09230	SSF50129	GroES-like
YSA_09230	SSF51735	NAD(P)-binding Rossmann-fold domains
YSA_09239	SSF47384	Homodimeric domain of signal transducing histidine kinase
YSA_09239	SSF55785	PYP-like sensor domain (PAS domain)
YSA_09239	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
YSA_09241	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_09242	SSF52172	CheY-like
YSA_09243	SSF117130	CsrA-like
YSA_09244	SSF55869	DNA topoisomerase I domain
YSA_09244	SSF56349	DNA breaking-rejoining enzymes
YSA_09246	SSF50331	MOP-like
YSA_09246	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_09248	SSF161098	MetI-like
YSA_09249	SSF53850	Periplasmic binding protein-like II
YSA_09251	SSF51412	Inosine monophosphate dehydrogenase (IMPDH)
YSA_09254	SSF141099	Atu1913-like
YSA_09262	SSF46626	Cytochrome c
YSA_09265	SSF46626	Cytochrome c
YSA_09267	SSF53448	Nucleotide-diphospho-sugar transferases
YSA_09269	SSF51905	FAD/NAD(P)-binding domain
YSA_09269	SSF55424	FAD/NAD-linked reductases, dimerisation (C-terminal) domain
YSA_09272	SSF103088	OmpA-like
YSA_09272	SSF53850	Periplasmic binding protein-like II
YSA_09273	SSF50331	MOP-like
YSA_09273	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_09276	SSF161098	MetI-like
YSA_09278	SSF161098	MetI-like
YSA_09280	SSF53850	Periplasmic binding protein-like II
YSA_09281	SSF142695	RibA-like
YSA_09281	SSF55821	YrdC/RibB
YSA_09282	SSF54909	Dimeric alpha+beta barrel
YSA_09284	SSF53474	alpha/beta-Hydrolases
YSA_09286	SSF46785	"Winged helix" DNA-binding domain
YSA_09286	SSF53850	Periplasmic binding protein-like II
YSA_09290	SSF160582	MbtH-like
YSA_09291	SSF53474	alpha/beta-Hydrolases
YSA_09293	SSF52499	Isochorismatase-like hydrolases
YSA_09299	SSF53807	"Helical backbone" metal receptor
YSA_09300	SSF81345	ABC transporter involved in vitamin B12 uptake, BtuC
YSA_09302	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_09303	SSF53807	"Helical backbone" metal receptor
YSA_09310	SSF51905	FAD/NAD(P)-binding domain
YSA_09313	SSF56601	beta-lactamase/transpeptidase-like
YSA_09318	SSF56349	DNA breaking-rejoining enzymes
YSA_09320	SSF46785	"Winged helix" DNA-binding domain
YSA_09320	SSF53850	Periplasmic binding protein-like II
YSA_09322	SSF51316	Mss4-like
YSA_09335	SSF51905	FAD/NAD(P)-binding domain
YSA_09338	SSF46689	Homeodomain-like
YSA_09341	SSF49899	Concanavalin A-like lectins/glucanases
YSA_09344	SSF51306	LexA/Signal peptidase
YSA_09349	SSF51735	NAD(P)-binding Rossmann-fold domains
YSA_09349	SSF53223	Aminoacid dehydrogenase-like, N-terminal domain
YSA_09351	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
YSA_09357	SSF53790	Tetrapyrrole methylase
YSA_09359	SSF52172	CheY-like
YSA_09363	SSF47384	Homodimeric domain of signal transducing histidine kinase
YSA_09363	SSF52172	CheY-like
YSA_09363	SSF55781	GAF domain-like
YSA_09363	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
YSA_09364	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
YSA_09366	SSF52738	Methylesterase CheB, C-terminal domain
YSA_09368	SSF47384	Homodimeric domain of signal transducing histidine kinase
YSA_09368	SSF52172	CheY-like
YSA_09368	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
YSA_09370	SSF52172	CheY-like
YSA_09372	SSF46689	Homeodomain-like
YSA_09374	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
YSA_09374	SSF51735	NAD(P)-binding Rossmann-fold domains
YSA_09377	SSF53901	Thiolase-like
YSA_09378	SSF46689	Homeodomain-like
YSA_09380	SSF69118	AhpD-like
YSA_09383	SSF103473	MFS general substrate transporter
YSA_09386	SSF46785	"Winged helix" DNA-binding domain
YSA_09386	SSF53383	PLP-dependent transferases
YSA_09388	SSF143744	GlcG-like
YSA_09389	SSF54862	4Fe-4S ferredoxins
YSA_09391	SSF55103	FAD-linked oxidases, C-terminal domain
YSA_09391	SSF56176	FAD-binding/transporter-associated domain-like
YSA_09392	SSF55103	FAD-linked oxidases, C-terminal domain
YSA_09392	SSF56176	FAD-binding/transporter-associated domain-like
YSA_09393	SSF46785	"Winged helix" DNA-binding domain
YSA_09393	SSF48008	GntR ligand-binding domain-like
YSA_09396	SSF47616	GST C-terminal domain-like
YSA_09396	SSF52833	Thioredoxin-like
YSA_09398	SSF56519	Penicillin binding protein dimerisation domain
YSA_09398	SSF56601	beta-lactamase/transpeptidase-like
YSA_09401	SSF103473	MFS general substrate transporter
YSA_09405	SSF46785	"Winged helix" DNA-binding domain
YSA_09405	SSF48008	GntR ligand-binding domain-like
YSA_09406	SSF52343	Ferredoxin reductase-like, C-terminal NADP-linked domain
YSA_09406	SSF54292	2Fe-2S ferredoxin-like
YSA_09406	SSF63380	Riboflavin synthase domain-like
YSA_09409	SSF50022	ISP domain
YSA_09409	SSF55961	Bet v1-like
YSA_09412	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_09416	SSF159245	AttH-like
YSA_09418	SSF52096	ClpP/crotonase
YSA_09419	SSF46689	Homeodomain-like
YSA_09419	SSF48498	Tetracyclin repressor-like, C-terminal domain
YSA_09420	SSF46894	C-terminal effector domain of the bipartite response regulators
YSA_09420	SSF52172	CheY-like
YSA_09422	SSF53850	Periplasmic binding protein-like II
YSA_09423	SSF47226	Histidine-containing phosphotransfer domain, HPT domain
YSA_09423	SSF47384	Homodimeric domain of signal transducing histidine kinase
YSA_09423	SSF52172	CheY-like
YSA_09423	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
YSA_09428	SSF52096	ClpP/crotonase
YSA_09429	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
YSA_09429	SSF56645	Acyl-CoA dehydrogenase NM domain-like
YSA_09432	SSF51735	NAD(P)-binding Rossmann-fold domains
YSA_09432	SSF52210	Succinyl-CoA synthetase domains
YSA_09432	SSF56059	Glutathione synthetase ATP-binding domain-like
YSA_09434	SSF52467	DHS-like NAD/FAD-binding domain
YSA_09434	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
YSA_09436	SSF50621	Alanine racemase C-terminal domain-like
YSA_09436	SSF51419	PLP-binding barrel
YSA_09437	SSF53383	PLP-dependent transferases
YSA_09439	SSF53720	ALDH-like
YSA_09441	SSF52218	Flavoproteins
YSA_09444	SSF53850	Periplasmic binding protein-like II
YSA_09446	SSF53383	PLP-dependent transferases
YSA_09449	SSF46894	C-terminal effector domain of the bipartite response regulators
YSA_09454	SSF46894	C-terminal effector domain of the bipartite response regulators
YSA_09455	SSF56176	FAD-binding/transporter-associated domain-like
YSA_09456	SSF51735	NAD(P)-binding Rossmann-fold domains
YSA_09458	SSF46785	"Winged helix" DNA-binding domain
YSA_09458	SSF53850	Periplasmic binding protein-like II
YSA_09461	SSF51604	Enolase C-terminal domain-like
YSA_09461	SSF54826	Enolase N-terminal domain-like
YSA_09463	SSF54909	Dimeric alpha+beta barrel
YSA_09465	SSF49482	Aromatic compound dioxygenase
YSA_09466	SSF55729	Acyl-CoA N-acyltransferases (Nat)
YSA_09468	SSF141868	EAL domain-like
YSA_09468	SSF55073	Nucleotide cyclase
YSA_09468	SSF55785	PYP-like sensor domain (PAS domain)
YSA_09469	SSF51430	NAD(P)-linked oxidoreductase
YSA_09471	SSF103481	Multidrug resistance efflux transporter EmrE
YSA_09475	SSF46785	"Winged helix" DNA-binding domain
YSA_09475	SSF53850	Periplasmic binding protein-like II
YSA_09477	SSF48113	Heme-dependent peroxidases
YSA_09478	SSF53092	Creatinase/prolidase N-terminal domain
YSA_09478	SSF55920	Creatinase/aminopeptidase
YSA_09480	SSF103473	MFS general substrate transporter
YSA_09481	SSF46689	Homeodomain-like
YSA_09481	SSF52317	Class I glutamine amidotransferase-like
YSA_09482	SSF56024	Phospholipase D/nuclease
YSA_09484	SSF55073	Nucleotide cyclase
YSA_09487	SSF102405	MCP/YpsA-like
YSA_09489	SSF46785	"Winged helix" DNA-binding domain
YSA_09489	SSF53850	Periplasmic binding protein-like II
YSA_09493	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
YSA_09496	SSF46689	Homeodomain-like
YSA_09498	SSF103473	MFS general substrate transporter
YSA_09499	SSF55469	FMN-dependent nitroreductase-like
YSA_09506	SSF46785	"Winged helix" DNA-binding domain
YSA_09506	SSF54909	Dimeric alpha+beta barrel
YSA_09513	SSF47384	Homodimeric domain of signal transducing histidine kinase
YSA_09513	SSF52172	CheY-like
YSA_09513	SSF55781	GAF domain-like
YSA_09513	SSF55785	PYP-like sensor domain (PAS domain)
YSA_09513	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
YSA_09515	SSF55811	Nudix
YSA_09517	SSF46785	"Winged helix" DNA-binding domain
YSA_09517	SSF48008	GntR ligand-binding domain-like
YSA_09520	SSF69118	AhpD-like
YSA_09521	SSF50475	FMN-binding split barrel
YSA_09522	SSF53720	ALDH-like
YSA_09524	SSF53474	alpha/beta-Hydrolases
YSA_09525	SSF160519	BB2672-like
YSA_09526	SSF51679	Bacterial luciferase-like
YSA_09528	SSF50475	FMN-binding split barrel
YSA_09532	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
YSA_09534	SSF51905	FAD/NAD(P)-binding domain
YSA_09536	SSF46785	"Winged helix" DNA-binding domain
YSA_09537	SSF46689	Homeodomain-like
YSA_09539	SSF69118	AhpD-like
YSA_09541	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
YSA_09541	SSF56645	Acyl-CoA dehydrogenase NM domain-like
YSA_09542	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_09544	SSF53850	Periplasmic binding protein-like II
YSA_09546	SSF161098	MetI-like
YSA_09547	SSF55729	Acyl-CoA N-acyltransferases (Nat)
YSA_09549	SSF46785	"Winged helix" DNA-binding domain
YSA_09549	SSF53850	Periplasmic binding protein-like II
YSA_09550	SSF51735	NAD(P)-binding Rossmann-fold domains
YSA_09550	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
YSA_09554	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
YSA_09565	SSF53850	Periplasmic binding protein-like II
YSA_09567	SSF46626	Cytochrome c
YSA_09571	SSF56003	Molybdenum cofactor-binding domain
YSA_09572	SSF47741	CO dehydrogenase ISP C-domain like
YSA_09572	SSF54292	2Fe-2S ferredoxin-like
YSA_09577	SSF82784	OsmC-like
YSA_09590	SSF50952	Soluble quinoprotein glucose dehydrogenase
YSA_09593	SSF56935	Porins
YSA_09596	SSF48371	ARM repeat
YSA_09600	SSF46785	"Winged helix" DNA-binding domain
YSA_09600	SSF53850	Periplasmic binding protein-like II
YSA_09608	SSF46785	"Winged helix" DNA-binding domain
YSA_09608	SSF48008	GntR ligand-binding domain-like
YSA_09610	SSF53720	ALDH-like
YSA_09614	SSF103473	MFS general substrate transporter
YSA_09616	SSF51569	Aldolase
YSA_09618	SSF52317	Class I glutamine amidotransferase-like
YSA_09621	SSF46689	Homeodomain-like
YSA_09622	SSF53098	Ribonuclease H-like
YSA_09625	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_09626	SSF50974	Nitrous oxide reductase, N-terminal domain
YSA_09628	SSF53822	Periplasmic binding protein-like I
YSA_09629	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
YSA_09630	SSF46894	C-terminal effector domain of the bipartite response regulators
YSA_09630	SSF52172	CheY-like
YSA_09631	SSF141571	Pentapeptide repeat-like
YSA_09633	SSF50998	Quinoprotein alcohol dehydrogenase-like
YSA_09635	SSF46626	Cytochrome c
YSA_09637	SSF53850	Periplasmic binding protein-like II
YSA_09639	SSF81296	E set domains
YSA_09640	SSF56281	Metallo-hydrolase/oxidoreductase
YSA_09642	SSF50998	Quinoprotein alcohol dehydrogenase-like
YSA_09645	SSF53720	ALDH-like
YSA_09648	SSF56796	Dehydroquinate synthase-like
YSA_09649	SSF47384	Homodimeric domain of signal transducing histidine kinase
YSA_09649	SSF52172	CheY-like
YSA_09649	SSF55785	PYP-like sensor domain (PAS domain)
YSA_09649	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
YSA_09661	SSF51569	Aldolase
YSA_09663	SSF55035	NAD-binding domain of HMG-CoA reductase
YSA_09663	SSF56542	Substrate-binding domain of HMG-CoA reductase
YSA_09665	SSF46785	"Winged helix" DNA-binding domain
YSA_09665	SSF53383	PLP-dependent transferases
YSA_09667	SSF46785	"Winged helix" DNA-binding domain
YSA_09667	SSF53850	Periplasmic binding protein-like II
YSA_09670	SSF53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes
YSA_09677	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
YSA_09678	SSF54001	Cysteine proteinases
YSA_09681	SSF56059	Glutathione synthetase ATP-binding domain-like
YSA_09684	SSF55298	YjgF-like
YSA_09686	SSF89733	L-sulfolactate dehydrogenase-like
YSA_09692	SSF51556	Metallo-dependent hydrolases
YSA_09693	SSF53720	ALDH-like
YSA_09696	SSF46785	"Winged helix" DNA-binding domain
YSA_09696	SSF53850	Periplasmic binding protein-like II
YSA_09698	SSF46785	"Winged helix" DNA-binding domain
YSA_09698	SSF53850	Periplasmic binding protein-like II
YSA_09700	SSF50475	FMN-binding split barrel
YSA_09702	SSF51726	UROD/MetE-like
YSA_09706	SSF52833	Thioredoxin-like
YSA_09707	SSF46785	"Winged helix" DNA-binding domain
YSA_09707	SSF53850	Periplasmic binding protein-like II
YSA_09708	SSF56935	Porins
YSA_09711	SSF103473	MFS general substrate transporter
YSA_09713	SSF53187	Zn-dependent exopeptidases
YSA_09713	SSF55031	Bacterial exopeptidase dimerisation domain
YSA_09719	SSF56219	DNase I-like
YSA_09723	SSF56801	Acetyl-CoA synthetase-like
YSA_09724	SSF48613	Heme oxygenase-like
YSA_09726	SSF51735	NAD(P)-binding Rossmann-fold domains
YSA_09728	SSF48452	TPR-like
YSA_09730	SSF52172	CheY-like
YSA_09731	SSF47384	Homodimeric domain of signal transducing histidine kinase
YSA_09731	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
YSA_09732	SSF52218	Flavoproteins
YSA_09734	SSF52788	Phosphotyrosine protein phosphatases I
YSA_09737	SSF46785	"Winged helix" DNA-binding domain
YSA_09743	SSF51735	NAD(P)-binding Rossmann-fold domains
YSA_09747	SSF52317	Class I glutamine amidotransferase-like
YSA_09750	SSF51735	NAD(P)-binding Rossmann-fold domains
YSA_09757	SSF48173	Cryptochrome/photolyase FAD-binding domain
YSA_09760	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
YSA_09764	SSF51905	FAD/NAD(P)-binding domain
YSA_09767	SSF51735	NAD(P)-binding Rossmann-fold domains
YSA_09769	SSF54427	NTF2-like
YSA_09771	SSF55785	PYP-like sensor domain (PAS domain)
YSA_09775	SSF46955	Putative DNA-binding domain
YSA_09777	SSF50182	Sm-like ribonucleoproteins
YSA_09777	SSF82689	Mechanosensitive channel protein MscS (YggB), C-terminal domain
YSA_09779	SSF51182	RmlC-like cupins
YSA_09780	SSF55729	Acyl-CoA N-acyltransferases (Nat)
YSA_09783	SSF53271	PRTase-like
YSA_09785	SSF52402	Adenine nucleotide alpha hydrolases-like
YSA_09788	SSF51679	Bacterial luciferase-like
YSA_09789	SSF56801	Acetyl-CoA synthetase-like
YSA_09791	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_09797	SSF53822	Periplasmic binding protein-like I
YSA_09800	SSF53822	Periplasmic binding protein-like I
YSA_09802	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_09810	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
YSA_09810	SSF56645	Acyl-CoA dehydrogenase NM domain-like
YSA_09813	SSF53822	Periplasmic binding protein-like I
YSA_09815	SSF53822	Periplasmic binding protein-like I
YSA_09818	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_09823	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
YSA_09823	SSF56645	Acyl-CoA dehydrogenase NM domain-like
YSA_09826	SSF52218	Flavoproteins
YSA_09828	SSF51679	Bacterial luciferase-like
YSA_09830	SSF56801	Acetyl-CoA synthetase-like
YSA_09832	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_09836	SSF53822	Periplasmic binding protein-like I
YSA_09838	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_09839	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
YSA_09839	SSF56645	Acyl-CoA dehydrogenase NM domain-like
YSA_09846	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_09847	SSF47336	ACP-like
YSA_09848	SSF53901	Thiolase-like
YSA_09850	SSF53901	Thiolase-like
YSA_09851	SSF53901	Thiolase-like
YSA_09852	SSF53901	Thiolase-like
YSA_09855	SSF53383	PLP-dependent transferases
YSA_09856	SSF51735	NAD(P)-binding Rossmann-fold domains
YSA_09857	SSF51735	NAD(P)-binding Rossmann-fold domains
YSA_09864	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
YSA_09865	SSF46955	Putative DNA-binding domain
YSA_09867	SSF52218	Flavoproteins
YSA_09870	SSF46785	"Winged helix" DNA-binding domain
YSA_09870	SSF53850	Periplasmic binding protein-like II
YSA_09871	SSF50129	GroES-like
YSA_09871	SSF51735	NAD(P)-binding Rossmann-fold domains
YSA_09877	SSF46785	"Winged helix" DNA-binding domain
YSA_09877	SSF53383	PLP-dependent transferases
YSA_09880	SSF103473	MFS general substrate transporter
YSA_09882	SSF51604	Enolase C-terminal domain-like
YSA_09882	SSF54826	Enolase N-terminal domain-like
YSA_09885	SSF46785	"Winged helix" DNA-binding domain
YSA_09885	SSF53850	Periplasmic binding protein-like II
YSA_09887	SSF46785	"Winged helix" DNA-binding domain
YSA_09887	SSF53850	Periplasmic binding protein-like II
YSA_09889	SSF89733	L-sulfolactate dehydrogenase-like
YSA_09891	SSF56529	FAH
YSA_09894	SSF103473	MFS general substrate transporter
YSA_09899	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_09903	SSF56349	DNA breaking-rejoining enzymes
YSA_09905	SSF54111	Urease, gamma-subunit
YSA_09907	SSF51278	Urease, beta-subunit
YSA_09908	SSF51338	Composite domain of metallo-dependent hydrolases
YSA_09908	SSF51556	Metallo-dependent hydrolases
YSA_09910	SSF69287	Urease metallochaperone UreE, N-terminal domain
YSA_09910	SSF69737	Urease metallochaperone UreE, C-terminal domain
YSA_09914	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_09918	SSF51695	PLC-like phosphodiesterases
YSA_09923	SSF52833	Thioredoxin-like
YSA_09925	SSF53649	Alkaline phosphatase-like
YSA_09926	SSF56935	Porins
YSA_09942	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_09947	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
YSA_09951	SSF142906	YjbR-like
YSA_09952	SSF46785	"Winged helix" DNA-binding domain
YSA_09952	SSF53850	Periplasmic binding protein-like II
YSA_09954	SSF52218	Flavoproteins
YSA_09956	SSF51905	FAD/NAD(P)-binding domain
YSA_09959	SSF47413	lambda repressor-like DNA-binding domains
YSA_09959	SSF51182	RmlC-like cupins
YSA_09961	SSF51395	FMN-linked oxidoreductases
YSA_09961	SSF51905	FAD/NAD(P)-binding domain
YSA_09963	SSF53850	Periplasmic binding protein-like II
YSA_09964	SSF53639	AraD/HMP-PK domain-like
YSA_09967	SSF103481	Multidrug resistance efflux transporter EmrE
YSA_09968	SSF117782	YbjQ-like
YSA_09980	SSF56601	beta-lactamase/transpeptidase-like
YSA_09985	SSF46689	Homeodomain-like
YSA_09985	SSF48498	Tetracyclin repressor-like, C-terminal domain
YSA_09987	SSF51735	NAD(P)-binding Rossmann-fold domains
YSA_09988	SSF52833	Thioredoxin-like
YSA_09991	SSF47413	lambda repressor-like DNA-binding domains
YSA_09991	SSF51182	RmlC-like cupins
YSA_09993	SSF103473	MFS general substrate transporter
YSA_09996	SSF81342	Transmembrane di-heme cytochromes
YSA_09997	SSF56634	Heme-dependent catalase-like
YSA_09998	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
YSA_09998	SSF88946	Sigma2 domain of RNA polymerase sigma factors
YSA_10000	SSF56219	DNase I-like
YSA_10003	SSF55729	Acyl-CoA N-acyltransferases (Nat)
YSA_10014	SSF46689	Homeodomain-like
YSA_10020	SSF46785	"Winged helix" DNA-binding domain
YSA_10023	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
YSA_10025	SSF56300	Metallo-dependent phosphatases
YSA_10028	SSF50891	Cyclophilin-like
YSA_10029	SSF50715	Ribosomal protein L25-like
YSA_10029	SSF52374	Nucleotidylyl transferase
YSA_10030	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
YSA_10030	SSF52374	Nucleotidylyl transferase
YSA_10033	SSF158472	HAMP domain-like
YSA_10033	SSF47384	Homodimeric domain of signal transducing histidine kinase
YSA_10033	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
YSA_10035	SSF52172	CheY-like
YSA_10036	SSF46785	"Winged helix" DNA-binding domain
YSA_10036	SSF48008	GntR ligand-binding domain-like
YSA_10038	SSF51197	Clavaminate synthase-like
YSA_10040	SSF51905	FAD/NAD(P)-binding domain
YSA_10046	SSF56112	Protein kinase-like (PK-like)
YSA_10047	SSF51569	Aldolase
YSA_10051	SSF103473	MFS general substrate transporter
YSA_10051	SSF103661	Proline/betaine transporter ProP, C-terminal cytoplasmic domain
YSA_10054	SSF63380	Riboflavin synthase domain-like
YSA_10059	SSF51445	(Trans)glycosidases
YSA_10060	SSF46785	"Winged helix" DNA-binding domain
YSA_10060	SSF53850	Periplasmic binding protein-like II
YSA_10061	SSF88713	Glycoside hydrolase/deacetylase
YSA_10062	SSF160467	PH0987 N-terminal domain-like
YSA_10062	SSF50891	Cyclophilin-like
YSA_10063	SSF50891	Cyclophilin-like
YSA_10067	SSF102114	Radical SAM enzymes
YSA_10067	SSF47781	RuvA domain 2-like
YSA_10068	SSF51905	FAD/NAD(P)-binding domain
YSA_10069	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
YSA_10069	SSF51735	NAD(P)-binding Rossmann-fold domains
YSA_10069	SSF52413	UDP-glucose/GDP-mannose dehydrogenase C-terminal domain
YSA_10072	SSF46785	"Winged helix" DNA-binding domain
YSA_10072	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
YSA_10076	SSF51735	NAD(P)-binding Rossmann-fold domains
YSA_10079	SSF50621	Alanine racemase C-terminal domain-like
YSA_10079	SSF51419	PLP-binding barrel
YSA_10083	SSF53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes
YSA_10088	SSF75304	Amidase signature (AS) enzymes
YSA_10096	SSF47616	GST C-terminal domain-like
YSA_10096	SSF52833	Thioredoxin-like
YSA_10100	SSF103473	MFS general substrate transporter
YSA_10102	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_10103	SSF56349	DNA breaking-rejoining enzymes
YSA_10106	SSF82784	OsmC-like
YSA_10109	SSF141488	YdhA-like
YSA_10112	SSF54506	Diaminopimelate epimerase-like
YSA_10119	SSF46785	"Winged helix" DNA-binding domain
YSA_10127	SSF143081	BB1717-like
YSA_10128	SSF109604	HD-domain/PDEase-like
YSA_10128	SSF52172	CheY-like
YSA_10129	SSF46626	Cytochrome c
YSA_10131	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
YSA_10132	SSF47384	Homodimeric domain of signal transducing histidine kinase
YSA_10132	SSF52172	CheY-like
YSA_10132	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
YSA_10133	SSF55729	Acyl-CoA N-acyltransferases (Nat)
YSA_10137	SSF143631	ApbE-like
YSA_10138	SSF52218	Flavoproteins
YSA_10138	SSF52343	Ferredoxin reductase-like, C-terminal NADP-linked domain
YSA_10138	SSF63380	Riboflavin synthase domain-like
YSA_10143	SSF52172	CheY-like
YSA_10144	SSF47384	Homodimeric domain of signal transducing histidine kinase
YSA_10144	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
YSA_10148	SSF46785	"Winged helix" DNA-binding domain
YSA_10148	SSF53383	PLP-dependent transferases
YSA_10151	SSF103481	Multidrug resistance efflux transporter EmrE
YSA_10152	SSF55785	PYP-like sensor domain (PAS domain)
YSA_10152	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
YSA_10154	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_10156	SSF50090	Electron transport accessory proteins
YSA_10157	SSF56209	Nitrile hydratase alpha chain
YSA_10158	SSF75304	Amidase signature (AS) enzymes
YSA_10160	SSF46458	Globin-like
YSA_10169	SSF46689	Homeodomain-like
YSA_10170	SSF54427	NTF2-like
YSA_10173	SSF46689	Homeodomain-like
YSA_10173	SSF48498	Tetracyclin repressor-like, C-terminal domain
YSA_10175	SSF46785	"Winged helix" DNA-binding domain
YSA_10175	SSF53850	Periplasmic binding protein-like II
YSA_10176	SSF50129	GroES-like
YSA_10176	SSF51735	NAD(P)-binding Rossmann-fold domains
YSA_10179	SSF54909	Dimeric alpha+beta barrel
YSA_10184	SSF143865	CorA soluble domain-like
YSA_10184	SSF144083	Magnesium transport protein CorA, transmembrane region
YSA_10186	SSF56059	Glutathione synthetase ATP-binding domain-like
YSA_10187	SSF55729	Acyl-CoA N-acyltransferases (Nat)
YSA_10191	SSF52833	Thioredoxin-like
YSA_10192	SSF69118	AhpD-like
YSA_10195	SSF46689	Homeodomain-like
YSA_10197	SSF46785	"Winged helix" DNA-binding domain
YSA_10197	SSF53850	Periplasmic binding protein-like II
YSA_10198	SSF50129	GroES-like
YSA_10198	SSF51735	NAD(P)-binding Rossmann-fold domains
YSA_10202	SSF81301	Nucleotidyltransferase
YSA_10207	SSF51735	NAD(P)-binding Rossmann-fold domains
YSA_10208	SSF51735	NAD(P)-binding Rossmann-fold domains
YSA_10210	SSF46955	Putative DNA-binding domain
YSA_10213	SSF51395	FMN-linked oxidoreductases
YSA_10218	SSF51735	NAD(P)-binding Rossmann-fold domains
YSA_10227	SSF46785	"Winged helix" DNA-binding domain
YSA_10227	SSF53850	Periplasmic binding protein-like II
YSA_10228	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
YSA_10228	SSF51735	NAD(P)-binding Rossmann-fold domains
YSA_10229	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
YSA_10230	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
YSA_10232	SSF89796	CoA-transferase family III (CaiB/BaiF)
YSA_10234	SSF51735	NAD(P)-binding Rossmann-fold domains
YSA_10234	SSF53223	Aminoacid dehydrogenase-like, N-terminal domain
YSA_10236	SSF52304	Type II 3-dehydroquinate dehydratase
YSA_10238	SSF103473	MFS general substrate transporter
YSA_10243	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
YSA_10243	SSF88946	Sigma2 domain of RNA polymerase sigma factors
YSA_10264	SSF50129	GroES-like
YSA_10264	SSF51735	NAD(P)-binding Rossmann-fold domains
YSA_10266	SSF51197	Clavaminate synthase-like
YSA_10269	SSF103473	MFS general substrate transporter
YSA_10272	SSF52833	Thioredoxin-like
YSA_10276	SSF46689	Homeodomain-like
YSA_10282	SSF53474	alpha/beta-Hydrolases
YSA_10288	SSF110296	Oligoxyloglucan reducing end-specific cellobiohydrolase
YSA_10290	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
YSA_10293	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
YSA_10293	SSF56645	Acyl-CoA dehydrogenase NM domain-like
YSA_10294	SSF56801	Acetyl-CoA synthetase-like
YSA_10299	SSF46767	Methylated DNA-protein cysteine methyltransferase, C-terminal domain
YSA_10299	SSF53155	Methylated DNA-protein cysteine methyltransferase domain
YSA_10303	SSF56317	Carbon-nitrogen hydrolase
YSA_10309	SSF46689	Homeodomain-like
YSA_10309	SSF51215	Regulatory protein AraC
YSA_10312	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
YSA_10342	SSF51306	LexA/Signal peptidase
YSA_10348	SSF57716	Glucocorticoid receptor-like (DNA-binding domain)
YSA_10365	SSF52096	ClpP/crotonase
YSA_10375	SSF160719	gpW/gp25-like
YSA_10379	SSF51126	Pectin lyase-like
YSA_10392	SSF69279	Phage tail proteins
YSA_10394	SSF53955	Lysozyme-like
YSA_10399	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_10402	SSF47413	lambda repressor-like DNA-binding domains
YSA_10405	SSF103515	Autotransporter
YSA_10405	SSF51126	Pectin lyase-like
YSA_10406	SSF54534	FKBP-like
YSA_10410	SSF56801	Acetyl-CoA synthetase-like
YSA_10413	SSF49772	Ecotin, trypsin inhibitor
YSA_10414	SSF51735	NAD(P)-binding Rossmann-fold domains
YSA_10418	SSF46689	Homeodomain-like
YSA_10418	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_10418	SSF55785	PYP-like sensor domain (PAS domain)
YSA_10420	SSF161098	MetI-like
YSA_10421	SSF161098	MetI-like
YSA_10423	SSF53850	Periplasmic binding protein-like II
YSA_10424	SSF54534	FKBP-like
YSA_10425	SSF51569	Aldolase
YSA_10431	SSF49777	PEBP-like
YSA_10435	SSF103473	MFS general substrate transporter
YSA_10443	SSF111369	HlyD-like secretion proteins
YSA_10444	SSF103473	MFS general substrate transporter
YSA_10445	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_10449	SSF141452	Hcp1-like
YSA_10450	SSF103088	OmpA-like
YSA_10450	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_10455	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_10463	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_10463	SSF81923	Double Clp-N motif
YSA_10467	SSF160719	gpW/gp25-like
YSA_10482	SSF101478	ADP-ribosylglycohydrolase
YSA_10485	SSF69255	gp5 N-terminal domain-like
YSA_10485	SSF69279	Phage tail proteins
YSA_10485	SSF69349	Phage fibre proteins
YSA_10488	SSF55724	Mog1p/PsbP-like
YSA_10533	SSF53187	Zn-dependent exopeptidases
YSA_10533	SSF55031	Bacterial exopeptidase dimerisation domain
YSA_10535	SSF103473	MFS general substrate transporter
YSA_10536	SSF75304	Amidase signature (AS) enzymes
YSA_10538	SSF46785	"Winged helix" DNA-binding domain
YSA_10538	SSF55781	GAF domain-like
YSA_10540	SSF46689	Homeodomain-like
YSA_10540	SSF51182	RmlC-like cupins
YSA_10542	SSF51735	NAD(P)-binding Rossmann-fold domains
YSA_10543	SSF51905	FAD/NAD(P)-binding domain
YSA_10543	SSF56425	Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain
YSA_10545	SSF54909	Dimeric alpha+beta barrel
YSA_10547	SSF103473	MFS general substrate transporter
YSA_10548	SSF56784	HAD-like
YSA_10549	SSF46785	"Winged helix" DNA-binding domain
YSA_10549	SSF51306	LexA/Signal peptidase
YSA_10552	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_10555	SSF56672	DNA/RNA polymerases
YSA_10556	SSF89550	PHP domain-like
YSA_10558	SSF51430	NAD(P)-linked oxidoreductase
YSA_10560	SSF46785	"Winged helix" DNA-binding domain
YSA_10560	SSF53850	Periplasmic binding protein-like II
YSA_10561	SSF100950	NagB/RpiA/CoA transferase-like
YSA_10563	SSF100950	NagB/RpiA/CoA transferase-like
YSA_10569	SSF47413	lambda repressor-like DNA-binding domains
YSA_10569	SSF51182	RmlC-like cupins
YSA_10577	SSF56935	Porins
YSA_10581	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_10583	SSF51735	NAD(P)-binding Rossmann-fold domains
YSA_10584	SSF51445	(Trans)glycosidases
YSA_10591	SSF51905	FAD/NAD(P)-binding domain
YSA_10592	SSF51161	Trimeric LpxA-like enzymes
YSA_10593	SSF53448	Nucleotide-diphospho-sugar transferases
YSA_10595	SSF51161	Trimeric LpxA-like enzymes
YSA_10597	SSF53448	Nucleotide-diphospho-sugar transferases
YSA_10602	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
YSA_10604	SSF53448	Nucleotide-diphospho-sugar transferases
YSA_10609	SSF46785	"Winged helix" DNA-binding domain
YSA_10609	SSF53850	Periplasmic binding protein-like II
YSA_10611	SSF143548	Serine metabolism enzymes domain
YSA_10614	SSF51905	FAD/NAD(P)-binding domain
YSA_10616	SSF53850	Periplasmic binding protein-like II
YSA_10618	SSF54368	Glutamine synthetase, N-terminal domain
YSA_10618	SSF55931	Glutamine synthetase/guanido kinase
YSA_10619	SSF46689	Homeodomain-like
YSA_10620	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_10621	SSF53720	ALDH-like
YSA_10625	SSF46785	"Winged helix" DNA-binding domain
YSA_10625	SSF53850	Periplasmic binding protein-like II
YSA_10633	SSF56935	Porins
YSA_10634	SSF52402	Adenine nucleotide alpha hydrolases-like
YSA_10635	SSF56655	Carbohydrate phosphatase
YSA_10643	SSF46689	Homeodomain-like
YSA_10646	SSF50022	ISP domain
YSA_10646	SSF55961	Bet v1-like
YSA_10647	SSF54427	NTF2-like
YSA_10649	SSF52343	Ferredoxin reductase-like, C-terminal NADP-linked domain
YSA_10649	SSF54292	2Fe-2S ferredoxin-like
YSA_10649	SSF63380	Riboflavin synthase domain-like
YSA_10652	SSF51735	NAD(P)-binding Rossmann-fold domains
YSA_10653	SSF103473	MFS general substrate transporter
YSA_10654	SSF49482	Aromatic compound dioxygenase
YSA_10662	SSF46785	"Winged helix" DNA-binding domain
YSA_10662	SSF53850	Periplasmic binding protein-like II
YSA_10663	SSF51679	Bacterial luciferase-like
YSA_10665	SSF51395	FMN-linked oxidoreductases
YSA_10666	SSF51430	NAD(P)-linked oxidoreductase
YSA_10668	SSF50022	ISP domain
YSA_10668	SSF51905	FAD/NAD(P)-binding domain
YSA_10668	SSF55424	FAD/NAD-linked reductases, dimerisation (C-terminal) domain
YSA_10669	SSF103473	MFS general substrate transporter
YSA_10672	SSF110738	Glycerate kinase I
YSA_10674	SSF46785	"Winged helix" DNA-binding domain
YSA_10674	SSF53850	Periplasmic binding protein-like II
YSA_10677	SSF63829	Calcium-dependent phosphotriesterase
YSA_10678	SSF47823	lambda integrase-like, N-terminal domain
YSA_10678	SSF56349	DNA breaking-rejoining enzymes
YSA_10679	SSF141868	EAL domain-like
YSA_10679	SSF55073	Nucleotide cyclase
YSA_10681	SSF46626	Cytochrome c
YSA_10681	SSF52833	Thioredoxin-like
YSA_10685	SSF49503	Cupredoxins
YSA_10688	SSF48613	Heme oxygenase-like
YSA_10690	SSF48613	Heme oxygenase-like
YSA_10693	SSF55073	Nucleotide cyclase
YSA_10696	SSF51338	Composite domain of metallo-dependent hydrolases
YSA_10696	SSF51556	Metallo-dependent hydrolases
YSA_10697	SSF51735	NAD(P)-binding Rossmann-fold domains
YSA_10699	SSF53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes
YSA_10715	SSF55073	Nucleotide cyclase
YSA_10716	SSF55729	Acyl-CoA N-acyltransferases (Nat)
YSA_10722	SSF54909	Dimeric alpha+beta barrel
YSA_10725	SSF51430	NAD(P)-linked oxidoreductase
YSA_10727	SSF103473	MFS general substrate transporter
YSA_10732	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
YSA_10734	SSF55931	Glutamine synthetase/guanido kinase
YSA_10735	SSF53167	Purine and uridine phosphorylases
YSA_10736	SSF100939	SPOC domain-like
YSA_10737	SSF53448	Nucleotide-diphospho-sugar transferases
YSA_10741	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
YSA_10742	SSF102588	LmbE-like
YSA_10744	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
YSA_10744	SSF56645	Acyl-CoA dehydrogenase NM domain-like
YSA_10746	SSF50249	Nucleic acid-binding proteins
YSA_10746	SSF56091	DNA ligase/mRNA capping enzyme, catalytic domain
YSA_10752	SSF56024	Phospholipase D/nuclease
YSA_10753	SSF56219	DNase I-like
YSA_10755	SSF117396	TM1631-like
YSA_10759	SSF52096	ClpP/crotonase
YSA_10762	SSF55811	Nudix
YSA_10772	SSF53720	ALDH-like
YSA_10772	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
YSA_10779	SSF52343	Ferredoxin reductase-like, C-terminal NADP-linked domain
YSA_10779	SSF54292	2Fe-2S ferredoxin-like
YSA_10779	SSF63380	Riboflavin synthase domain-like
YSA_10781	SSF117916	Fe-S cluster assembly (FSCA) domain-like
YSA_10782	SSF47240	Ferritin-like
YSA_10784	SSF47240	Ferritin-like
YSA_10788	SSF56801	Acetyl-CoA synthetase-like
YSA_10790	SSF53901	Thiolase-like
YSA_10792	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
YSA_10793	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
YSA_10793	SSF51735	NAD(P)-binding Rossmann-fold domains
YSA_10795	SSF52096	ClpP/crotonase
YSA_10797	SSF52096	ClpP/crotonase
YSA_10799	SSF51161	Trimeric LpxA-like enzymes
YSA_10800	SSF46785	"Winged helix" DNA-binding domain
YSA_10805	SSF46785	"Winged helix" DNA-binding domain
YSA_10805	SSF51206	cAMP-binding domain-like
YSA_10807	SSF52402	Adenine nucleotide alpha hydrolases-like
YSA_10808	SSF55729	Acyl-CoA N-acyltransferases (Nat)
YSA_10810	SSF52402	Adenine nucleotide alpha hydrolases-like
YSA_10811	SSF56281	Metallo-hydrolase/oxidoreductase
YSA_10815	SSF53271	PRTase-like
YSA_10817	SSF159501	EreA/ChaN-like
YSA_10819	SSF55729	Acyl-CoA N-acyltransferases (Nat)
YSA_10820	SSF46785	"Winged helix" DNA-binding domain
YSA_10820	SSF51206	cAMP-binding domain-like
YSA_10822	SSF49764	HSP20-like chaperones
YSA_10823	SSF54631	CBS-domain pair
YSA_10825	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
YSA_10825	SSF52922	TK C-terminal domain-like
YSA_10827	SSF81324	Voltage-gated potassium channels
YSA_10830	SSF140990	FtsH protease domain-like
YSA_10830	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_10833	SSF56784	HAD-like
YSA_10833	SSF81653	Calcium ATPase, transduction domain A
YSA_10833	SSF81665	Calcium ATPase, transmembrane domain M
YSA_10835	SSF52402	Adenine nucleotide alpha hydrolases-like
YSA_10837	SSF52402	Adenine nucleotide alpha hydrolases-like
YSA_10839	SSF53271	PRTase-like
YSA_10854	SSF56349	DNA breaking-rejoining enzymes
YSA_10862	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_10869	SSF47413	lambda repressor-like DNA-binding domains
YSA_10875	SSF47823	lambda integrase-like, N-terminal domain
YSA_10875	SSF56349	DNA breaking-rejoining enzymes
YSA_10876	SSF53720	ALDH-like
YSA_10879	SSF53187	Zn-dependent exopeptidases
YSA_10879	SSF55031	Bacterial exopeptidase dimerisation domain
YSA_10881	SSF103473	MFS general substrate transporter
YSA_10884	SSF46785	"Winged helix" DNA-binding domain
YSA_10884	SSF53850	Periplasmic binding protein-like II
YSA_10887	SSF46785	"Winged helix" DNA-binding domain
YSA_10887	SSF53850	Periplasmic binding protein-like II
YSA_10890	SSF53474	alpha/beta-Hydrolases
YSA_10892	SSF53213	LigB-like
YSA_10893	SSF51735	NAD(P)-binding Rossmann-fold domains
YSA_10896	SSF53474	alpha/beta-Hydrolases
YSA_10897	SSF55469	FMN-dependent nitroreductase-like
YSA_10898	SSF54909	Dimeric alpha+beta barrel
YSA_10900	SSF55331	Tautomerase/MIF
YSA_10904	SSF46785	"Winged helix" DNA-binding domain
YSA_10904	SSF53850	Periplasmic binding protein-like II
YSA_10906	SSF51735	NAD(P)-binding Rossmann-fold domains
YSA_10907	SSF51679	Bacterial luciferase-like
YSA_10910	SSF51658	Xylose isomerase-like
YSA_10911	SSF51658	Xylose isomerase-like
YSA_10914	SSF51679	Bacterial luciferase-like
YSA_10917	SSF46785	"Winged helix" DNA-binding domain
YSA_10917	SSF53850	Periplasmic binding protein-like II
YSA_10920	SSF46785	"Winged helix" DNA-binding domain
YSA_10921	SSF46785	"Winged helix" DNA-binding domain
YSA_10921	SSF53850	Periplasmic binding protein-like II
YSA_10923	SSF46785	"Winged helix" DNA-binding domain
YSA_10923	SSF53850	Periplasmic binding protein-like II
YSA_10925	SSF51604	Enolase C-terminal domain-like
YSA_10925	SSF54826	Enolase N-terminal domain-like
YSA_10927	SSF54909	Dimeric alpha+beta barrel
YSA_10930	SSF49482	Aromatic compound dioxygenase
YSA_10938	SSF56349	DNA breaking-rejoining enzymes
YSA_10948	SSF50610	mu transposase, C-terminal domain
YSA_10948	SSF53098	Ribonuclease H-like
YSA_10951	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_10958	SSF56349	DNA breaking-rejoining enzymes
YSA_10959	SSF47823	lambda integrase-like, N-terminal domain
YSA_10963	SSF100950	NagB/RpiA/CoA transferase-like
YSA_10964	SSF54909	Dimeric alpha+beta barrel
YSA_10966	SSF103473	MFS general substrate transporter
YSA_10969	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
YSA_10971	SSF100950	NagB/RpiA/CoA transferase-like
YSA_10972	SSF100950	NagB/RpiA/CoA transferase-like
YSA_10974	SSF46785	"Winged helix" DNA-binding domain
YSA_10974	SSF53850	Periplasmic binding protein-like II
YSA_10976	SSF56281	Metallo-hydrolase/oxidoreductase
YSA_10980	SSF53474	alpha/beta-Hydrolases
YSA_10981	SSF53901	Thiolase-like
YSA_10989	SSF51621	Phosphoenolpyruvate/pyruvate domain
YSA_10991	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
YSA_10991	SSF56645	Acyl-CoA dehydrogenase NM domain-like
YSA_10993	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
YSA_10996	SSF46689	Homeodomain-like
YSA_10997	SSF103473	MFS general substrate transporter
YSA_10999	SSF54909	Dimeric alpha+beta barrel
YSA_11001	SSF53187	Zn-dependent exopeptidases
YSA_11001	SSF55031	Bacterial exopeptidase dimerisation domain
YSA_11002	SSF46689	Homeodomain-like
YSA_11005	SSF47823	lambda integrase-like, N-terminal domain
YSA_11005	SSF56349	DNA breaking-rejoining enzymes
YSA_11011	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_11014	SSF52467	DHS-like NAD/FAD-binding domain
YSA_11019	SSF47413	lambda repressor-like DNA-binding domains
YSA_11031	SSF53850	Periplasmic binding protein-like II
YSA_11034	SSF75620	Release factor
YSA_11041	SSF51182	RmlC-like cupins
YSA_11044	SSF52467	DHS-like NAD/FAD-binding domain
YSA_11044	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
YSA_11046	SSF47741	CO dehydrogenase ISP C-domain like
YSA_11046	SSF54292	2Fe-2S ferredoxin-like
YSA_11048	SSF55447	CO dehydrogenase flavoprotein C-terminal domain-like
YSA_11048	SSF56176	FAD-binding/transporter-associated domain-like
YSA_11050	SSF54665	CO dehydrogenase molybdoprotein N-domain-like
YSA_11050	SSF56003	Molybdenum cofactor-binding domain
YSA_11057	SSF142433	CinA-like
YSA_11063	SSF50129	GroES-like
YSA_11063	SSF51735	NAD(P)-binding Rossmann-fold domains
YSA_11066	SSF51735	NAD(P)-binding Rossmann-fold domains
YSA_11067	SSF56954	Outer membrane efflux proteins (OEP)
YSA_11068	SSF46689	Homeodomain-like
YSA_11068	SSF48498	Tetracyclin repressor-like, C-terminal domain
YSA_11071	SSF111369	HlyD-like secretion proteins
YSA_11072	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
YSA_11072	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
YSA_11072	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
YSA_11075	SSF53901	Thiolase-like
YSA_11077	SSF103473	MFS general substrate transporter
YSA_11083	SSF56935	Porins
YSA_11087	SSF118215	Proton glutamate symport protein
YSA_11090	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
YSA_11092	SSF46785	"Winged helix" DNA-binding domain
YSA_11092	SSF53850	Periplasmic binding protein-like II
YSA_11097	SSF56935	Porins
YSA_11100	SSF56935	Porins
YSA_11103	SSF55073	Nucleotide cyclase
YSA_11107	SSF50182	Sm-like ribonucleoproteins
YSA_11107	SSF82689	Mechanosensitive channel protein MscS (YggB), C-terminal domain
YSA_11107	SSF82861	Mechanosensitive channel protein MscS (YggB), transmembrane region
YSA_11110	SSF51261	Duplicated hybrid motif
YSA_11110	SSF53383	PLP-dependent transferases
YSA_11110	SSF56112	Protein kinase-like (PK-like)
YSA_11112	SSF46785	"Winged helix" DNA-binding domain
YSA_11112	SSF54909	Dimeric alpha+beta barrel
YSA_11113	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_11115	SSF52172	CheY-like
YSA_11115	SSF55781	GAF domain-like
YSA_11115	SSF55785	PYP-like sensor domain (PAS domain)
YSA_11118	SSF52467	DHS-like NAD/FAD-binding domain
YSA_11118	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
YSA_11122	SSF46785	"Winged helix" DNA-binding domain
YSA_11122	SSF53850	Periplasmic binding protein-like II
YSA_11123	SSF53474	alpha/beta-Hydrolases
YSA_11124	SSF103473	MFS general substrate transporter
YSA_11126	SSF46785	"Winged helix" DNA-binding domain
YSA_11126	SSF53850	Periplasmic binding protein-like II
YSA_11128	SSF51430	NAD(P)-linked oxidoreductase
YSA_11129	SSF158472	HAMP domain-like
YSA_11129	SSF47384	Homodimeric domain of signal transducing histidine kinase
YSA_11129	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
YSA_11130	SSF46894	C-terminal effector domain of the bipartite response regulators
YSA_11130	SSF52172	CheY-like
YSA_11136	SSF54060	His-Me finger endonucleases
YSA_11136	SSF57884	Ada DNA repair protein, N-terminal domain (N-Ada 10)
YSA_11138	SSF51735	NAD(P)-binding Rossmann-fold domains
YSA_11138	SSF52283	Formate/glycerate dehydrogenase catalytic domain-like
YSA_11140	SSF103473	MFS general substrate transporter
YSA_11142	SSF53613	Ribokinase-like
YSA_11143	SSF51658	Xylose isomerase-like
YSA_11145	SSF47413	lambda repressor-like DNA-binding domains
YSA_11145	SSF53822	Periplasmic binding protein-like I
YSA_11148	SSF46626	Cytochrome c
YSA_11149	SSF51905	FAD/NAD(P)-binding domain
YSA_11149	SSF54373	FAD-linked reductases, C-terminal domain
YSA_11155	SSF53254	Phosphoglycerate mutase-like
YSA_11156	SSF48317	Acid phosphatase/Vanadium-dependent haloperoxidase
YSA_11160	SSF69255	gp5 N-terminal domain-like
YSA_11160	SSF69279	Phage tail proteins
YSA_11160	SSF69349	Phage fibre proteins
YSA_11174	SSF103473	MFS general substrate transporter
YSA_11176	SSF51161	Trimeric LpxA-like enzymes
YSA_11178	SSF89796	CoA-transferase family III (CaiB/BaiF)
YSA_11180	SSF51569	Aldolase
YSA_11182	SSF46785	"Winged helix" DNA-binding domain
YSA_11182	SSF53850	Periplasmic binding protein-like II
YSA_11191	SSF51197	Clavaminate synthase-like
YSA_11198	SSF51182	RmlC-like cupins
YSA_11202	SSF53474	alpha/beta-Hydrolases
YSA_11206	SSF55729	Acyl-CoA N-acyltransferases (Nat)
YSA_11210	SSF159664	CobE/GbiG C-terminal domain-like
YSA_11212	SSF53790	Tetrapyrrole methylase
YSA_11216	SSF46894	C-terminal effector domain of the bipartite response regulators
YSA_11216	SSF52172	CheY-like
YSA_11219	SSF47226	Histidine-containing phosphotransfer domain, HPT domain
YSA_11219	SSF47384	Homodimeric domain of signal transducing histidine kinase
YSA_11219	SSF52172	CheY-like
YSA_11219	SSF53850	Periplasmic binding protein-like II
YSA_11219	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
YSA_11220	SSF55785	PYP-like sensor domain (PAS domain)
YSA_11220	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
YSA_11223	SSF53822	Periplasmic binding protein-like I
YSA_11224	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_11228	SSF46689	Homeodomain-like
YSA_11228	SSF52172	CheY-like
YSA_11228	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_11229	SSF47384	Homodimeric domain of signal transducing histidine kinase
YSA_11229	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
YSA_11232	SSF47384	Homodimeric domain of signal transducing histidine kinase
YSA_11232	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
YSA_11234	SSF53955	Lysozyme-like
YSA_11235	SSF54523	Pili subunits
YSA_11239	SSF111369	HlyD-like secretion proteins
YSA_11242	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
YSA_11242	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
YSA_11242	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
YSA_11245	SSF56954	Outer membrane efflux proteins (OEP)
YSA_11247	SSF48431	Lipovitellin-phosvitin complex, superhelical domain
YSA_11247	SSF48452	TPR-like
YSA_11248	SSF47384	Homodimeric domain of signal transducing histidine kinase
YSA_11248	SSF52172	CheY-like
YSA_11248	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
YSA_11249	SSF47384	Homodimeric domain of signal transducing histidine kinase
YSA_11249	SSF52172	CheY-like
YSA_11249	SSF55785	PYP-like sensor domain (PAS domain)
YSA_11249	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
YSA_11251	SSF52317	Class I glutamine amidotransferase-like
YSA_11254	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
YSA_11257	SSF141868	EAL domain-like
YSA_11261	SSF54631	CBS-domain pair
YSA_11261	SSF56176	FAD-binding/transporter-associated domain-like
YSA_11265	SSF55729	Acyl-CoA N-acyltransferases (Nat)
YSA_11271	SSF53720	ALDH-like
YSA_11272	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
YSA_11276	SSF53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes
YSA_11276	SSF55021	ACT-like
YSA_11282	SSF47384	Homodimeric domain of signal transducing histidine kinase
YSA_11282	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
YSA_11284	SSF46894	C-terminal effector domain of the bipartite response regulators
YSA_11284	SSF52172	CheY-like
YSA_11285	SSF111369	HlyD-like secretion proteins
YSA_11288	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
YSA_11288	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
YSA_11288	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
YSA_11289	SSF53448	Nucleotide-diphospho-sugar transferases
YSA_11290	SSF56801	Acetyl-CoA synthetase-like
YSA_11292	SSF50969	YVTN repeat-like/Quinoprotein amine dehydrogenase
YSA_11295	SSF69131	Quinohemoprotein amine dehydrogenase C chain
YSA_11297	SSF102114	Radical SAM enzymes
YSA_11298	SSF46626	Cytochrome c
YSA_11298	SSF69298	Quinohemoprotein amine dehydrogenase A chain, domain 3
YSA_11298	SSF81296	E set domains
YSA_11302	SSF53720	ALDH-like
YSA_11305	SSF51905	FAD/NAD(P)-binding domain
YSA_11306	SSF52743	Subtilisin-like
YSA_11307	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_11307	SSF90123	ABC transporter transmembrane region
YSA_11309	SSF46689	Homeodomain-like
YSA_11309	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_11309	SSF55785	PYP-like sensor domain (PAS domain)
YSA_11318	SSF54523	Pili subunits
YSA_11319	SSF54523	Pili subunits
YSA_11321	SSF48452	TPR-like
YSA_11328	SSF160246	EspE N-terminal domain-like
YSA_11328	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_11329	SSF52172	CheY-like
YSA_11332	SSF109998	Triger factor/SurA peptide-binding domain-like
YSA_11334	SSF46626	Cytochrome c
YSA_11334	SSF53822	Periplasmic binding protein-like I
YSA_11335	SSF52833	Thioredoxin-like
YSA_11336	SSF52833	Thioredoxin-like
YSA_11339	SSF50974	Nitrous oxide reductase, N-terminal domain
YSA_11343	SSF49503	Cupredoxins
YSA_11347	SSF52096	ClpP/crotonase
YSA_11349	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
YSA_11349	SSF56645	Acyl-CoA dehydrogenase NM domain-like
YSA_11351	SSF46785	"Winged helix" DNA-binding domain
YSA_11351	SSF53850	Periplasmic binding protein-like II
YSA_11357	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
YSA_11358	SSF55298	YjgF-like
YSA_11364	SSF46689	Homeodomain-like
YSA_11364	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YSA_11372	SSF53300	vWA-like