PPUBIRD1_0004	PWY-6123	inosine-5'-phosphate biosynthesis I
PPUBIRD1_0004	PWY-7234	inosine-5'-phosphate biosynthesis III
PPUBIRD1_0008	PWY-5392	reductive TCA cycle II
PPUBIRD1_0008	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
PPUBIRD1_0008	PWY-5690	TCA cycle II (plants and fungi)
PPUBIRD1_0008	PWY-5913	TCA cycle VI (obligate autotrophs)
PPUBIRD1_0008	PWY-6728	methylaspartate cycle
PPUBIRD1_0008	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
PPUBIRD1_0008	PWY-7254	TCA cycle VII (acetate-producers)
PPUBIRD1_0008	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
PPUBIRD1_0020	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
PPUBIRD1_0026	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
PPUBIRD1_0026	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
PPUBIRD1_0036	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
PPUBIRD1_0036	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
PPUBIRD1_0038	PWY-6891	thiazole biosynthesis II (Bacillus)
PPUBIRD1_0038	PWY-6892	thiazole biosynthesis I (E. coli)
PPUBIRD1_0038	PWY-7560	methylerythritol phosphate pathway II
PPUBIRD1_0055	PWY-6749	CMP-legionaminate biosynthesis I
PPUBIRD1_0057	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
PPUBIRD1_0059	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
PPUBIRD1_0061	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
PPUBIRD1_0085	PWY-3722	glycine betaine biosynthesis II (Gram-positive bacteria)
PPUBIRD1_0085	PWY-7494	choline degradation IV
PPUBIRD1_0102	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
PPUBIRD1_0102	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
PPUBIRD1_0103	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
PPUBIRD1_0128	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
PPUBIRD1_0128	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
PPUBIRD1_0128	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
PPUBIRD1_0128	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
PPUBIRD1_0132	PWY-3781	aerobic respiration I (cytochrome c)
PPUBIRD1_0132	PWY-4521	arsenite oxidation I (respiratory)
PPUBIRD1_0132	PWY-6692	Fe(II) oxidation
PPUBIRD1_0132	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
PPUBIRD1_0143	PWY-5506	methanol oxidation to formaldehyde IV
PPUBIRD1_0149	PWY-702	L-methionine biosynthesis II
PPUBIRD1_0177	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
PPUBIRD1_0213	PWY-4983	L-citrulline-nitric oxide cycle
PPUBIRD1_0213	PWY-4984	urea cycle
PPUBIRD1_0213	PWY-5	canavanine biosynthesis
PPUBIRD1_0213	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
PPUBIRD1_0213	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
PPUBIRD1_0216	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
PPUBIRD1_0216	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
PPUBIRD1_0217	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
PPUBIRD1_0217	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
PPUBIRD1_0269	PWY-6840	homoglutathione biosynthesis
PPUBIRD1_0269	PWY-7255	ergothioneine biosynthesis I (bacteria)
PPUBIRD1_0280	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
PPUBIRD1_0280	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
PPUBIRD1_0293	PWY-43	putrescine biosynthesis II
PPUBIRD1_0331	PWY-1361	benzoyl-CoA degradation I (aerobic)
PPUBIRD1_0331	PWY-3602	L-carnitine degradation II
PPUBIRD1_0331	PWY-5109	2-methylbutanoate biosynthesis
PPUBIRD1_0331	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
PPUBIRD1_0331	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
PPUBIRD1_0331	PWY-5177	glutaryl-CoA degradation
PPUBIRD1_0331	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
PPUBIRD1_0331	PWY-6435	4-hydroxybenzoate biosynthesis V
PPUBIRD1_0331	PWY-6583	pyruvate fermentation to butanol I
PPUBIRD1_0331	PWY-6863	pyruvate fermentation to hexanol
PPUBIRD1_0331	PWY-6883	pyruvate fermentation to butanol II
PPUBIRD1_0331	PWY-6944	androstenedione degradation
PPUBIRD1_0331	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
PPUBIRD1_0331	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
PPUBIRD1_0331	PWY-7007	methyl ketone biosynthesis
PPUBIRD1_0331	PWY-7046	4-coumarate degradation (anaerobic)
PPUBIRD1_0331	PWY-7094	fatty acid salvage
PPUBIRD1_0331	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
PPUBIRD1_0331	PWY-735	jasmonic acid biosynthesis
PPUBIRD1_0331	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
PPUBIRD1_0331	PWY-7472	D-carnitine degradation II
PPUBIRD1_0338	PWY-7533	gliotoxin biosynthesis
PPUBIRD1_0353	PWY-1622	formaldehyde assimilation I (serine pathway)
PPUBIRD1_0353	PWY-181	photorespiration
PPUBIRD1_0353	PWY-2161	folate polyglutamylation
PPUBIRD1_0353	PWY-2201	folate transformations I
PPUBIRD1_0353	PWY-3661	glycine betaine degradation I
PPUBIRD1_0353	PWY-3661-1	glycine betaine degradation II (mammalian)
PPUBIRD1_0353	PWY-3841	folate transformations II
PPUBIRD1_0353	PWY-5497	purine nucleobases degradation II (anaerobic)
PPUBIRD1_0354	PWY-3661	glycine betaine degradation I
PPUBIRD1_0354	PWY-4722	creatinine degradation II
PPUBIRD1_0355	PWY-3661	glycine betaine degradation I
PPUBIRD1_0355	PWY-4722	creatinine degradation II
PPUBIRD1_0356	PWY-3661	glycine betaine degradation I
PPUBIRD1_0356	PWY-4722	creatinine degradation II
PPUBIRD1_0357	PWY-3661	glycine betaine degradation I
PPUBIRD1_0357	PWY-4722	creatinine degradation II
PPUBIRD1_0358	PWY-2201	folate transformations I
PPUBIRD1_0358	PWY-5497	purine nucleobases degradation II (anaerobic)
PPUBIRD1_0372	PWY-6891	thiazole biosynthesis II (Bacillus)
PPUBIRD1_0372	PWY-6892	thiazole biosynthesis I (E. coli)
PPUBIRD1_0372	PWY-7560	methylerythritol phosphate pathway II
PPUBIRD1_0392	PWY-6728	methylaspartate cycle
PPUBIRD1_0392	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
PPUBIRD1_0392	PWY-7118	chitin degradation to ethanol
PPUBIRD1_0392	PWY-7294	xylose degradation IV
PPUBIRD1_0392	PWY-7295	L-arabinose degradation IV
PPUBIRD1_0399	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
PPUBIRD1_0400	PWY-6519	8-amino-7-oxononanoate biosynthesis I
PPUBIRD1_0400	PWY-6578	8-amino-7-oxononanoate biosynthesis III
PPUBIRD1_0400	PWY-7147	8-amino-7-oxononanoate biosynthesis II
PPUBIRD1_0402	PWY-6519	8-amino-7-oxononanoate biosynthesis I
PPUBIRD1_0403	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
PPUBIRD1_0412	PWY-6823	molybdenum cofactor biosynthesis
PPUBIRD1_0414	PWY-6420	pyrroloquinoline quinone biosynthesis
PPUBIRD1_0430	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
PPUBIRD1_0430	PWY-6148	tetrahydromethanopterin biosynthesis
PPUBIRD1_0430	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
PPUBIRD1_0430	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
PPUBIRD1_0431	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
PPUBIRD1_0431	PWY-6148	tetrahydromethanopterin biosynthesis
PPUBIRD1_0431	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
PPUBIRD1_0431	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
PPUBIRD1_0436	PWY-5350	thiosulfate disproportionation III (rhodanese)
PPUBIRD1_0453	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
PPUBIRD1_0453	PWY-5723	Rubisco shunt
PPUBIRD1_0454	PWY-181	photorespiration
PPUBIRD1_0455	PWY-5958	acridone alkaloid biosynthesis
PPUBIRD1_0455	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
PPUBIRD1_0455	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
PPUBIRD1_0457	PWY-5958	acridone alkaloid biosynthesis
PPUBIRD1_0457	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
PPUBIRD1_0457	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
PPUBIRD1_0460	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
PPUBIRD1_0460	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
PPUBIRD1_0467	PWY-723	alkylnitronates degradation
PPUBIRD1_0469	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
PPUBIRD1_0469	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
PPUBIRD1_0474	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
PPUBIRD1_0474	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
PPUBIRD1_0475	PWY-3961	phosphopantothenate biosynthesis II
PPUBIRD1_0518	PWY-5506	methanol oxidation to formaldehyde IV
PPUBIRD1_0556	PWY-6167	flavin biosynthesis II (archaea)
PPUBIRD1_0556	PWY-6168	flavin biosynthesis III (fungi)
PPUBIRD1_0556	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
PPUBIRD1_0557	PWY-6167	flavin biosynthesis II (archaea)
PPUBIRD1_0557	PWY-6168	flavin biosynthesis III (fungi)
PPUBIRD1_0557	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
PPUBIRD1_0558	PWY-6167	flavin biosynthesis II (archaea)
PPUBIRD1_0558	PWY-6168	flavin biosynthesis III (fungi)
PPUBIRD1_0560	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
PPUBIRD1_0560	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
PPUBIRD1_0560	PWY-6896	thiamin salvage I
PPUBIRD1_0560	PWY-6897	thiamin salvage II
PPUBIRD1_0561	PWY-5269	cardiolipin biosynthesis II
PPUBIRD1_0561	PWY-5668	cardiolipin biosynthesis I
PPUBIRD1_0563	PWY-6168	flavin biosynthesis III (fungi)
PPUBIRD1_0563	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
PPUBIRD1_0567	PWY-6891	thiazole biosynthesis II (Bacillus)
PPUBIRD1_0567	PWY-6892	thiazole biosynthesis I (E. coli)
PPUBIRD1_0567	PWY-7560	methylerythritol phosphate pathway II
PPUBIRD1_0570	PWY-6167	flavin biosynthesis II (archaea)
PPUBIRD1_0570	PWY-6168	flavin biosynthesis III (fungi)
PPUBIRD1_0606	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
PPUBIRD1_0606	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
PPUBIRD1_0606	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
PPUBIRD1_0610	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
PPUBIRD1_0610	PWY-6416	quinate degradation II
PPUBIRD1_0610	PWY-6707	gallate biosynthesis
PPUBIRD1_0617	PWY-40	putrescine biosynthesis I
PPUBIRD1_0617	PWY-43	putrescine biosynthesis II
PPUBIRD1_0617	PWY-6305	putrescine biosynthesis IV
PPUBIRD1_0617	PWY-6834	spermidine biosynthesis III
PPUBIRD1_0641	PWY-6610	adenine and adenosine salvage IV
PPUBIRD1_0647	PWY-5642	2,4-dinitrotoluene degradation
PPUBIRD1_0647	PWY-6373	acrylate degradation
PPUBIRD1_0653	PWY-5523	5,6-dimethylbenzimidazole biosynthesis
PPUBIRD1_0653	PWY-6167	flavin biosynthesis II (archaea)
PPUBIRD1_0653	PWY-6168	flavin biosynthesis III (fungi)
PPUBIRD1_0657	PWY-7560	methylerythritol phosphate pathway II
PPUBIRD1_0664	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
PPUBIRD1_0698	PWY-1622	formaldehyde assimilation I (serine pathway)
PPUBIRD1_0698	PWY-5392	reductive TCA cycle II
PPUBIRD1_0698	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
PPUBIRD1_0698	PWY-5690	TCA cycle II (plants and fungi)
PPUBIRD1_0698	PWY-5913	TCA cycle VI (obligate autotrophs)
PPUBIRD1_0698	PWY-6728	methylaspartate cycle
PPUBIRD1_0698	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
PPUBIRD1_0698	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
PPUBIRD1_0698	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
PPUBIRD1_0711	PWY-1622	formaldehyde assimilation I (serine pathway)
PPUBIRD1_0711	PWY-181	photorespiration
PPUBIRD1_0711	PWY-2161	folate polyglutamylation
PPUBIRD1_0711	PWY-2201	folate transformations I
PPUBIRD1_0711	PWY-3661	glycine betaine degradation I
PPUBIRD1_0711	PWY-3661-1	glycine betaine degradation II (mammalian)
PPUBIRD1_0711	PWY-3841	folate transformations II
PPUBIRD1_0711	PWY-5497	purine nucleobases degradation II (anaerobic)
PPUBIRD1_0769	PWY-7560	methylerythritol phosphate pathway II
PPUBIRD1_0778	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
PPUBIRD1_0782	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
PPUBIRD1_0782	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
PPUBIRD1_0792	PWY-7183	pyrimidine nucleobases salvage I
PPUBIRD1_0797	PWY-7254	TCA cycle VII (acetate-producers)
PPUBIRD1_0820	PWY-1281	sulfoacetaldehyde degradation I
PPUBIRD1_0820	PWY-5482	pyruvate fermentation to acetate II
PPUBIRD1_0820	PWY-5485	pyruvate fermentation to acetate IV
PPUBIRD1_0820	PWY-5497	purine nucleobases degradation II (anaerobic)
PPUBIRD1_0820	PWY-6637	sulfolactate degradation II
PPUBIRD1_0831	PWY-5316	nicotine biosynthesis
PPUBIRD1_0831	PWY-5381	pyridine nucleotide cycling (plants)
PPUBIRD1_0831	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
PPUBIRD1_0831	PWY-7342	superpathway of nicotine biosynthesis
PPUBIRD1_0839	PWY-7077	<i>N</i>-acetyl-D-galactosamine degradation
PPUBIRD1_0839	PWY-7395	D-galactosamine and <i>N</i>-acetyl-D-galactosamine degradation
PPUBIRD1_0840	PWY-7310	D-glucosaminate degradation
PPUBIRD1_0857	PWY-3781	aerobic respiration I (cytochrome c)
PPUBIRD1_0857	PWY-4521	arsenite oxidation I (respiratory)
PPUBIRD1_0857	PWY-6692	Fe(II) oxidation
PPUBIRD1_0857	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
PPUBIRD1_0857	PWY-7544	pyruvate to cytochrome <i>bo</i> oxidase electron transfer
PPUBIRD1_0872	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
PPUBIRD1_0883	PWY-6700	queuosine biosynthesis
PPUBIRD1_0884	PWY-6700	queuosine biosynthesis
PPUBIRD1_0889	PWY-2301	<i>myo</i>-inositol biosynthesis
PPUBIRD1_0889	PWY-4702	phytate degradation I
PPUBIRD1_0889	PWY-6363	D-<i>myo</i>-inositol (1,4,5)-trisphosphate degradation
PPUBIRD1_0891	PWY-6936	seleno-amino acid biosynthesis
PPUBIRD1_0891	PWY-7274	D-cycloserine biosynthesis
PPUBIRD1_0893	PWY-6823	molybdenum cofactor biosynthesis
PPUBIRD1_0893	PWY-6891	thiazole biosynthesis II (Bacillus)
PPUBIRD1_0893	PWY-6892	thiazole biosynthesis I (E. coli)
PPUBIRD1_0893	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
PPUBIRD1_0900	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
PPUBIRD1_0900	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
PPUBIRD1_0900	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
PPUBIRD1_0900	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
PPUBIRD1_0900	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
PPUBIRD1_0900	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
PPUBIRD1_0900	PWY-7205	CMP phosphorylation
PPUBIRD1_0900	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
PPUBIRD1_0900	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
PPUBIRD1_0900	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
PPUBIRD1_0900	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
PPUBIRD1_0900	PWY-7224	purine deoxyribonucleosides salvage
PPUBIRD1_0900	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
PPUBIRD1_0900	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
PPUBIRD1_0904	PWY-7560	methylerythritol phosphate pathway II
PPUBIRD1_0925	PWY-5692	allantoin degradation to glyoxylate II
PPUBIRD1_0925	PWY-5698	allantoin degradation to ureidoglycolate II (ammonia producing)
PPUBIRD1_0948	PWY-5392	reductive TCA cycle II
PPUBIRD1_0948	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
PPUBIRD1_0948	PWY-5690	TCA cycle II (plants and fungi)
PPUBIRD1_0948	PWY-5913	TCA cycle VI (obligate autotrophs)
PPUBIRD1_0948	PWY-6728	methylaspartate cycle
PPUBIRD1_0948	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
PPUBIRD1_0948	PWY-7254	TCA cycle VII (acetate-producers)
PPUBIRD1_0948	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
PPUBIRD1_0966	PWY-6854	ethylene biosynthesis III (microbes)
PPUBIRD1_0973	PWY-6012	acyl carrier protein metabolism I
PPUBIRD1_0982	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
PPUBIRD1_0997	PWY-5392	reductive TCA cycle II
PPUBIRD1_0997	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
PPUBIRD1_0997	PWY-5690	TCA cycle II (plants and fungi)
PPUBIRD1_0997	PWY-5913	TCA cycle VI (obligate autotrophs)
PPUBIRD1_0997	PWY-6728	methylaspartate cycle
PPUBIRD1_0997	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
PPUBIRD1_0997	PWY-7254	TCA cycle VII (acetate-producers)
PPUBIRD1_0997	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
PPUBIRD1_0999	PWY-6854	ethylene biosynthesis III (microbes)
PPUBIRD1_1009	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
PPUBIRD1_1009	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
PPUBIRD1_1017	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
PPUBIRD1_1017	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
PPUBIRD1_1031	PWY-5988	wound-induced proteolysis I
PPUBIRD1_1031	PWY-6018	seed germination protein turnover
PPUBIRD1_1050	PWY-4981	L-proline biosynthesis II (from arginine)
PPUBIRD1_1050	PWY-4984	urea cycle
PPUBIRD1_1050	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
PPUBIRD1_1051	PWY-4981	L-proline biosynthesis II (from arginine)
PPUBIRD1_1055	PWY-5874	heme degradation
PPUBIRD1_1055	PWY-5915	phycoerythrobilin biosynthesis I
PPUBIRD1_1055	PWY-5917	phycocyanobilin biosynthesis
PPUBIRD1_1055	PWY-7170	phytochromobilin biosynthesis
PPUBIRD1_1059	PWY-1042	glycolysis IV (plant cytosol)
PPUBIRD1_1059	PWY-5484	glycolysis II (from fructose 6-phosphate)
PPUBIRD1_1059	PWY-6901	superpathway of glucose and xylose degradation
PPUBIRD1_1059	PWY-7003	glycerol degradation to butanol
PPUBIRD1_1060	PWY-5101	L-isoleucine biosynthesis II
PPUBIRD1_1060	PWY-5103	L-isoleucine biosynthesis III
PPUBIRD1_1060	PWY-5104	L-isoleucine biosynthesis IV
PPUBIRD1_1060	PWY-7111	pyruvate fermentation to isobutanol (engineered)
PPUBIRD1_1061	PWY-2723	trehalose degradation V
PPUBIRD1_1061	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
PPUBIRD1_1061	PWY-5661	GDP-glucose biosynthesis
PPUBIRD1_1061	PWY-7238	sucrose biosynthesis II
PPUBIRD1_1061	PWY-7385	1,3-propanediol biosynthesis (engineered)
PPUBIRD1_1070	PWY-2723	trehalose degradation V
PPUBIRD1_1070	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
PPUBIRD1_1070	PWY-5661	GDP-glucose biosynthesis
PPUBIRD1_1070	PWY-5940	streptomycin biosynthesis
PPUBIRD1_1070	PWY-621	sucrose degradation III (sucrose invertase)
PPUBIRD1_1070	PWY-622	starch biosynthesis
PPUBIRD1_1070	PWY-6731	starch degradation III
PPUBIRD1_1070	PWY-6737	starch degradation V
PPUBIRD1_1070	PWY-6981	chitin biosynthesis
PPUBIRD1_1070	PWY-7238	sucrose biosynthesis II
PPUBIRD1_1070	PWY-7343	UDP-glucose biosynthesis
PPUBIRD1_1072	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
PPUBIRD1_1073	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
PPUBIRD1_1073	PWY-6855	chitin degradation I (archaea)
PPUBIRD1_1073	PWY-6906	chitin derivatives degradation
PPUBIRD1_1074	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
PPUBIRD1_1074	PWY-6507	4-deoxy-L-<i>threo</i>-hex-4-enopyranuronate degradation
PPUBIRD1_1074	PWY-7242	D-fructuronate degradation
PPUBIRD1_1074	PWY-7310	D-glucosaminate degradation
PPUBIRD1_1075	PWY-6871	3-methylbutanol biosynthesis
PPUBIRD1_1081	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
PPUBIRD1_1081	PWY-6596	adenosine nucleotides degradation I
PPUBIRD1_1081	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
PPUBIRD1_1082	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
PPUBIRD1_1087	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
PPUBIRD1_1087	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
PPUBIRD1_1087	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
PPUBIRD1_1088	PWY-5663	tetrahydrobiopterin biosynthesis I
PPUBIRD1_1088	PWY-5664	tetrahydrobiopterin biosynthesis II
PPUBIRD1_1088	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
PPUBIRD1_1088	PWY-6703	preQ<sub>0</sub> biosynthesis
PPUBIRD1_1088	PWY-6983	tetrahydrobiopterin biosynthesis III
PPUBIRD1_1088	PWY-7442	drosopterin and aurodrosopterin biosynthesis
PPUBIRD1_1123	PWY-4261	glycerol degradation I
PPUBIRD1_1123	PWY-6118	glycerol-3-phosphate shuttle
PPUBIRD1_1123	PWY-6952	glycerophosphodiester degradation
PPUBIRD1_1125	PWY-4261	glycerol degradation I
PPUBIRD1_1129	PWY-4981	L-proline biosynthesis II (from arginine)
PPUBIRD1_1129	PWY-4984	urea cycle
PPUBIRD1_1129	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
PPUBIRD1_1136	PWY-5686	UMP biosynthesis
PPUBIRD1_1138	PWY-4983	L-citrulline-nitric oxide cycle
PPUBIRD1_1138	PWY-4984	urea cycle
PPUBIRD1_1138	PWY-5	canavanine biosynthesis
PPUBIRD1_1138	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
PPUBIRD1_1138	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
PPUBIRD1_1150	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
PPUBIRD1_1172	PWY-6807	xyloglucan degradation II (exoglucanase)
PPUBIRD1_1175	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
PPUBIRD1_1175	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
PPUBIRD1_1208	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
PPUBIRD1_1208	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
PPUBIRD1_1218	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
PPUBIRD1_1218	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
PPUBIRD1_1218	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
PPUBIRD1_1218	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
PPUBIRD1_1218	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
PPUBIRD1_1218	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
PPUBIRD1_1218	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
PPUBIRD1_1218	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
PPUBIRD1_1220	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
PPUBIRD1_1220	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
PPUBIRD1_1220	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
PPUBIRD1_1220	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
PPUBIRD1_1220	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
PPUBIRD1_1220	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
PPUBIRD1_1220	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
PPUBIRD1_1220	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
PPUBIRD1_1224	PWY-6012	acyl carrier protein metabolism I
PPUBIRD1_1224	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
PPUBIRD1_1263	PWY-6703	preQ<sub>0</sub> biosynthesis
PPUBIRD1_1264	PWY-6703	preQ<sub>0</sub> biosynthesis
PPUBIRD1_1269	PWY-5316	nicotine biosynthesis
PPUBIRD1_1269	PWY-7342	superpathway of nicotine biosynthesis
PPUBIRD1_1275	PWY-2941	L-lysine biosynthesis II
PPUBIRD1_1275	PWY-2942	L-lysine biosynthesis III
PPUBIRD1_1275	PWY-5097	L-lysine biosynthesis VI
PPUBIRD1_1278	PWY-6123	inosine-5'-phosphate biosynthesis I
PPUBIRD1_1278	PWY-6124	inosine-5'-phosphate biosynthesis II
PPUBIRD1_1278	PWY-7234	inosine-5'-phosphate biosynthesis III
PPUBIRD1_1288	PWY-7254	TCA cycle VII (acetate-producers)
PPUBIRD1_1300	PWY-6823	molybdenum cofactor biosynthesis
PPUBIRD1_1328	PWY-6936	seleno-amino acid biosynthesis
PPUBIRD1_1351	PWY-381	nitrate reduction II (assimilatory)
PPUBIRD1_1351	PWY-5675	nitrate reduction V (assimilatory)
PPUBIRD1_1351	PWY-6549	L-glutamine biosynthesis III
PPUBIRD1_1351	PWY-6963	ammonia assimilation cycle I
PPUBIRD1_1351	PWY-6964	ammonia assimilation cycle II
PPUBIRD1_1353	PWY-4381	fatty acid biosynthesis initiation I
PPUBIRD1_1376	PWY-40	putrescine biosynthesis I
PPUBIRD1_1376	PWY-6305	putrescine biosynthesis IV
PPUBIRD1_1407	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
PPUBIRD1_1407	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
PPUBIRD1_1410	PWY-7158	L-phenylalanine degradation V
PPUBIRD1_1411	PWY-6134	L-tyrosine biosynthesis IV
PPUBIRD1_1411	PWY-7158	L-phenylalanine degradation V
PPUBIRD1_1414	PWY-6672	<i>cis</i>-genanyl-CoA degradation
PPUBIRD1_1414	PWY-7118	chitin degradation to ethanol
PPUBIRD1_1430	PWY-2941	L-lysine biosynthesis II
PPUBIRD1_1430	PWY-2942	L-lysine biosynthesis III
PPUBIRD1_1430	PWY-5097	L-lysine biosynthesis VI
PPUBIRD1_1430	PWY-6559	spermidine biosynthesis II
PPUBIRD1_1430	PWY-6562	norspermidine biosynthesis
PPUBIRD1_1430	PWY-7153	grixazone biosynthesis
PPUBIRD1_1434	PWY-5532	adenosine nucleotides degradation IV
PPUBIRD1_1438	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
PPUBIRD1_1438	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
PPUBIRD1_1441	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
PPUBIRD1_1443	PWY-381	nitrate reduction II (assimilatory)
PPUBIRD1_1443	PWY-5675	nitrate reduction V (assimilatory)
PPUBIRD1_1443	PWY-6549	L-glutamine biosynthesis III
PPUBIRD1_1443	PWY-6963	ammonia assimilation cycle I
PPUBIRD1_1443	PWY-6964	ammonia assimilation cycle II
PPUBIRD1_1463	PWY-4381	fatty acid biosynthesis initiation I
PPUBIRD1_1471	PWY-5833	CDP-4-dehydro-3,6-dideoxy-D-glucose biosynthesis
PPUBIRD1_1471	PWY-5940	streptomycin biosynthesis
PPUBIRD1_1472	PWY-5833	CDP-4-dehydro-3,6-dideoxy-D-glucose biosynthesis
PPUBIRD1_1475	PWY-6478	GDP-D-<i>glycero</i>-&alpha;-D-<i>manno</i>-heptose biosynthesis
PPUBIRD1_1493	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
PPUBIRD1_1537	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
PPUBIRD1_1541	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
PPUBIRD1_1541	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
PPUBIRD1_1555	PWY-1042	glycolysis IV (plant cytosol)
PPUBIRD1_1555	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
PPUBIRD1_1555	PWY-5484	glycolysis II (from fructose 6-phosphate)
PPUBIRD1_1555	PWY-5723	Rubisco shunt
PPUBIRD1_1555	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
PPUBIRD1_1555	PWY-6886	1-butanol autotrophic biosynthesis
PPUBIRD1_1555	PWY-6901	superpathway of glucose and xylose degradation
PPUBIRD1_1555	PWY-7003	glycerol degradation to butanol
PPUBIRD1_1555	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
PPUBIRD1_1555	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
PPUBIRD1_1567	PWY-5694	allantoin degradation to glyoxylate I
PPUBIRD1_1567	PWY-5705	allantoin degradation to glyoxylate III
PPUBIRD1_1568	PWY-5691	urate degradation to allantoin I
PPUBIRD1_1568	PWY-7394	urate degradation to allantoin II
PPUBIRD1_1570	PWY-5691	urate degradation to allantoin I
PPUBIRD1_1570	PWY-7394	urate degradation to allantoin II
PPUBIRD1_1574	PWY-5497	purine nucleobases degradation II (anaerobic)
PPUBIRD1_1574	PWY-6606	guanosine nucleotides degradation II
PPUBIRD1_1574	PWY-6608	guanosine nucleotides degradation III
PPUBIRD1_1574	PWY-7442	drosopterin and aurodrosopterin biosynthesis
PPUBIRD1_1576	PWY-5497	purine nucleobases degradation II (anaerobic)
PPUBIRD1_1576	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
PPUBIRD1_1576	PWY-6538	caffeine degradation III (bacteria, via demethylation)
PPUBIRD1_1576	PWY-6596	adenosine nucleotides degradation I
PPUBIRD1_1576	PWY-6606	guanosine nucleotides degradation II
PPUBIRD1_1576	PWY-6607	guanosine nucleotides degradation I
PPUBIRD1_1576	PWY-6608	guanosine nucleotides degradation III
PPUBIRD1_1576	PWY-6999	theophylline degradation
PPUBIRD1_1577	PWY-5497	purine nucleobases degradation II (anaerobic)
PPUBIRD1_1577	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
PPUBIRD1_1577	PWY-6538	caffeine degradation III (bacteria, via demethylation)
PPUBIRD1_1577	PWY-6596	adenosine nucleotides degradation I
PPUBIRD1_1577	PWY-6606	guanosine nucleotides degradation II
PPUBIRD1_1577	PWY-6607	guanosine nucleotides degradation I
PPUBIRD1_1577	PWY-6608	guanosine nucleotides degradation III
PPUBIRD1_1577	PWY-6999	theophylline degradation
PPUBIRD1_1590	PWY-6605	adenine and adenosine salvage II
PPUBIRD1_1590	PWY-6610	adenine and adenosine salvage IV
PPUBIRD1_1600	PWY-3781	aerobic respiration I (cytochrome c)
PPUBIRD1_1600	PWY-4521	arsenite oxidation I (respiratory)
PPUBIRD1_1600	PWY-6692	Fe(II) oxidation
PPUBIRD1_1600	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
PPUBIRD1_1601	PWY-3781	aerobic respiration I (cytochrome c)
PPUBIRD1_1601	PWY-4521	arsenite oxidation I (respiratory)
PPUBIRD1_1601	PWY-6692	Fe(II) oxidation
PPUBIRD1_1601	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
PPUBIRD1_1602	PWY-3781	aerobic respiration I (cytochrome c)
PPUBIRD1_1602	PWY-4521	arsenite oxidation I (respiratory)
PPUBIRD1_1602	PWY-6692	Fe(II) oxidation
PPUBIRD1_1602	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
PPUBIRD1_1605	PWY-3781	aerobic respiration I (cytochrome c)
PPUBIRD1_1605	PWY-4521	arsenite oxidation I (respiratory)
PPUBIRD1_1605	PWY-6692	Fe(II) oxidation
PPUBIRD1_1605	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
PPUBIRD1_1606	PWY-3781	aerobic respiration I (cytochrome c)
PPUBIRD1_1606	PWY-4521	arsenite oxidation I (respiratory)
PPUBIRD1_1606	PWY-6692	Fe(II) oxidation
PPUBIRD1_1606	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
PPUBIRD1_1626	PWY-6409	pyoverdine I biosynthesis
PPUBIRD1_1626	PWY-6562	norspermidine biosynthesis
PPUBIRD1_1626	PWY-761	rhizobactin 1021 biosynthesis
PPUBIRD1_1637	PWY-7533	gliotoxin biosynthesis
PPUBIRD1_1661	PWY-3781	aerobic respiration I (cytochrome c)
PPUBIRD1_1661	PWY-4302	aerobic respiration III (alternative oxidase pathway)
PPUBIRD1_1661	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
PPUBIRD1_1661	PWY-5690	TCA cycle II (plants and fungi)
PPUBIRD1_1661	PWY-6728	methylaspartate cycle
PPUBIRD1_1661	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
PPUBIRD1_1661	PWY-7254	TCA cycle VII (acetate-producers)
PPUBIRD1_1661	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
PPUBIRD1_1662	PWY-3781	aerobic respiration I (cytochrome c)
PPUBIRD1_1662	PWY-4302	aerobic respiration III (alternative oxidase pathway)
PPUBIRD1_1662	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
PPUBIRD1_1662	PWY-5690	TCA cycle II (plants and fungi)
PPUBIRD1_1662	PWY-6728	methylaspartate cycle
PPUBIRD1_1662	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
PPUBIRD1_1662	PWY-7254	TCA cycle VII (acetate-producers)
PPUBIRD1_1662	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
PPUBIRD1_1663	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
PPUBIRD1_1664	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
PPUBIRD1_1665	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
PPUBIRD1_1665	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
PPUBIRD1_1666	PWY-5392	reductive TCA cycle II
PPUBIRD1_1666	PWY-5537	pyruvate fermentation to acetate V
PPUBIRD1_1666	PWY-5538	pyruvate fermentation to acetate VI
PPUBIRD1_1666	PWY-5690	TCA cycle II (plants and fungi)
PPUBIRD1_1666	PWY-5913	TCA cycle VI (obligate autotrophs)
PPUBIRD1_1666	PWY-6728	methylaspartate cycle
PPUBIRD1_1666	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
PPUBIRD1_1666	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
PPUBIRD1_1667	PWY-5392	reductive TCA cycle II
PPUBIRD1_1667	PWY-5537	pyruvate fermentation to acetate V
PPUBIRD1_1667	PWY-5538	pyruvate fermentation to acetate VI
PPUBIRD1_1667	PWY-5690	TCA cycle II (plants and fungi)
PPUBIRD1_1667	PWY-5913	TCA cycle VI (obligate autotrophs)
PPUBIRD1_1667	PWY-6728	methylaspartate cycle
PPUBIRD1_1667	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
PPUBIRD1_1667	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
PPUBIRD1_1677	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
PPUBIRD1_1678	PWY-5971	palmitate biosynthesis II (bacteria and plants)
PPUBIRD1_1678	PWY-5973	<i>cis</i>-vaccenate biosynthesis
PPUBIRD1_1678	PWY-5989	stearate biosynthesis II (bacteria and plants)
PPUBIRD1_1678	PWY-5994	palmitate biosynthesis I (animals and fungi)
PPUBIRD1_1678	PWY-6113	superpathway of mycolate biosynthesis
PPUBIRD1_1678	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
PPUBIRD1_1678	PWY-6519	8-amino-7-oxononanoate biosynthesis I
PPUBIRD1_1678	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
PPUBIRD1_1678	PWYG-321	mycolate biosynthesis
PPUBIRD1_1682	PWY-5667	CDP-diacylglycerol biosynthesis I
PPUBIRD1_1682	PWY-5981	CDP-diacylglycerol biosynthesis III
PPUBIRD1_1705	PWY-5386	methylglyoxal degradation I
PPUBIRD1_1734	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
PPUBIRD1_1753	PWY-5269	cardiolipin biosynthesis II
PPUBIRD1_1753	PWY-5668	cardiolipin biosynthesis I
PPUBIRD1_1759	PWY-4381	fatty acid biosynthesis initiation I
PPUBIRD1_1759	PWY-5743	3-hydroxypropanoate cycle
PPUBIRD1_1759	PWY-5744	glyoxylate assimilation
PPUBIRD1_1759	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
PPUBIRD1_1759	PWY-6679	jadomycin biosynthesis
PPUBIRD1_1759	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
PPUBIRD1_1765	PWY-2622	trehalose biosynthesis IV
PPUBIRD1_1766	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
PPUBIRD1_1766	PWY-622	starch biosynthesis
PPUBIRD1_1772	PWY-2661	trehalose biosynthesis V
PPUBIRD1_1773	PWY-5941	glycogen degradation II (eukaryotic)
PPUBIRD1_1773	PWY-6724	starch degradation II
PPUBIRD1_1773	PWY-6737	starch degradation V
PPUBIRD1_1773	PWY-7238	sucrose biosynthesis II
PPUBIRD1_1774	PWY-2661	trehalose biosynthesis V
PPUBIRD1_1775	PWY-622	starch biosynthesis
PPUBIRD1_1778	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
PPUBIRD1_1784	PWY-3982	uracil degradation I (reductive)
PPUBIRD1_1784	PWY-6430	thymine degradation
PPUBIRD1_1791	PWY-5381	pyridine nucleotide cycling (plants)
PPUBIRD1_1798	PWY-6123	inosine-5'-phosphate biosynthesis I
PPUBIRD1_1798	PWY-6124	inosine-5'-phosphate biosynthesis II
PPUBIRD1_1798	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
PPUBIRD1_1798	PWY-7234	inosine-5'-phosphate biosynthesis III
PPUBIRD1_1802	PWY-5913	TCA cycle VI (obligate autotrophs)
PPUBIRD1_1802	PWY-6549	L-glutamine biosynthesis III
PPUBIRD1_1802	PWY-6728	methylaspartate cycle
PPUBIRD1_1802	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
PPUBIRD1_1802	PWY-7124	ethylene biosynthesis V (engineered)
PPUBIRD1_1802	PWY-7254	TCA cycle VII (acetate-producers)
PPUBIRD1_1802	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
PPUBIRD1_1803	PWY-5913	TCA cycle VI (obligate autotrophs)
PPUBIRD1_1803	PWY-6549	L-glutamine biosynthesis III
PPUBIRD1_1803	PWY-6728	methylaspartate cycle
PPUBIRD1_1803	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
PPUBIRD1_1803	PWY-7124	ethylene biosynthesis V (engineered)
PPUBIRD1_1803	PWY-7254	TCA cycle VII (acetate-producers)
PPUBIRD1_1803	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
PPUBIRD1_1814	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
PPUBIRD1_1815	PWY-5194	siroheme biosynthesis
PPUBIRD1_1815	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
PPUBIRD1_1816	PWY-4061	glutathione-mediated detoxification I
PPUBIRD1_1816	PWY-6842	glutathione-mediated detoxification II
PPUBIRD1_1816	PWY-7112	4-hydroxy-2-nonenal detoxification
PPUBIRD1_1816	PWY-7533	gliotoxin biosynthesis
PPUBIRD1_1866	PWY-5033	nicotinate degradation II
PPUBIRD1_1866	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
PPUBIRD1_1866	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
PPUBIRD1_1866	PWY-6993	nicotine degradation II (pyrrolidine pathway)
PPUBIRD1_1866	PWY-722	nicotinate degradation I
PPUBIRD1_1890	PWY-6825	phosphatidylcholine biosynthesis V
PPUBIRD1_1953	PWY-723	alkylnitronates degradation
PPUBIRD1_1959	PWY-3801	sucrose degradation II (sucrose synthase)
PPUBIRD1_1959	PWY-6527	stachyose degradation
PPUBIRD1_1959	PWY-6981	chitin biosynthesis
PPUBIRD1_1959	PWY-7238	sucrose biosynthesis II
PPUBIRD1_1959	PWY-7343	UDP-glucose biosynthesis
PPUBIRD1_1960	PWY-4081	glutathione redox reactions I
PPUBIRD1_1966	PWY-6167	flavin biosynthesis II (archaea)
PPUBIRD1_1966	PWY-6168	flavin biosynthesis III (fungi)
PPUBIRD1_1966	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
PPUBIRD1_1994	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
PPUBIRD1_1996	PWY-5386	methylglyoxal degradation I
PPUBIRD1_1999	PWY-7376	cob(II)yrinate <i>a,c</i>-diamide biosynthesis II (late cobalt incorporation)
PPUBIRD1_2007	PWY-1361	benzoyl-CoA degradation I (aerobic)
PPUBIRD1_2007	PWY-5109	2-methylbutanoate biosynthesis
PPUBIRD1_2007	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
PPUBIRD1_2007	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
PPUBIRD1_2007	PWY-5177	glutaryl-CoA degradation
PPUBIRD1_2007	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
PPUBIRD1_2007	PWY-6435	4-hydroxybenzoate biosynthesis V
PPUBIRD1_2007	PWY-6583	pyruvate fermentation to butanol I
PPUBIRD1_2007	PWY-6863	pyruvate fermentation to hexanol
PPUBIRD1_2007	PWY-6883	pyruvate fermentation to butanol II
PPUBIRD1_2007	PWY-6944	androstenedione degradation
PPUBIRD1_2007	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
PPUBIRD1_2007	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
PPUBIRD1_2007	PWY-7007	methyl ketone biosynthesis
PPUBIRD1_2007	PWY-7046	4-coumarate degradation (anaerobic)
PPUBIRD1_2007	PWY-7094	fatty acid salvage
PPUBIRD1_2007	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
PPUBIRD1_2007	PWY-735	jasmonic acid biosynthesis
PPUBIRD1_2007	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
PPUBIRD1_2016	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
PPUBIRD1_2016	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
PPUBIRD1_2017	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
PPUBIRD1_2017	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
PPUBIRD1_2038	PWY-5392	reductive TCA cycle II
PPUBIRD1_2038	PWY-5537	pyruvate fermentation to acetate V
PPUBIRD1_2038	PWY-5538	pyruvate fermentation to acetate VI
PPUBIRD1_2038	PWY-5690	TCA cycle II (plants and fungi)
PPUBIRD1_2038	PWY-5913	TCA cycle VI (obligate autotrophs)
PPUBIRD1_2038	PWY-6728	methylaspartate cycle
PPUBIRD1_2038	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
PPUBIRD1_2038	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
PPUBIRD1_2040	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
PPUBIRD1_2052	PWY-6185	4-methylcatechol degradation (<i>ortho</i> cleavage)
PPUBIRD1_2064	PWY-5269	cardiolipin biosynthesis II
PPUBIRD1_2064	PWY-5668	cardiolipin biosynthesis I
PPUBIRD1_2069	PWY-5381	pyridine nucleotide cycling (plants)
PPUBIRD1_2085	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
PPUBIRD1_2085	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
PPUBIRD1_2104	PWY-3722	glycine betaine biosynthesis II (Gram-positive bacteria)
PPUBIRD1_2104	PWY-7494	choline degradation IV
PPUBIRD1_2128	PWY-5381	pyridine nucleotide cycling (plants)
PPUBIRD1_2156	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
PPUBIRD1_2156	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
PPUBIRD1_2191	PWY-6497	D-galactarate degradation II
PPUBIRD1_2193	PWY-6497	D-galactarate degradation II
PPUBIRD1_2193	PWY-6499	D-glucarate degradation II
PPUBIRD1_2203	PWY-5913	TCA cycle VI (obligate autotrophs)
PPUBIRD1_2203	PWY-6318	L-phenylalanine degradation IV (mammalian, via side chain)
PPUBIRD1_2203	PWY-6638	sulfolactate degradation III
PPUBIRD1_2203	PWY-6642	(<i>R</i>)-cysteate degradation
PPUBIRD1_2203	PWY-6643	coenzyme M biosynthesis II
PPUBIRD1_2203	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
PPUBIRD1_2203	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
PPUBIRD1_2203	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
PPUBIRD1_2214	PWY-2723	trehalose degradation V
PPUBIRD1_2214	PWY-3801	sucrose degradation II (sucrose synthase)
PPUBIRD1_2214	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
PPUBIRD1_2214	PWY-5661	GDP-glucose biosynthesis
PPUBIRD1_2214	PWY-5661-1	PPUBIRD1_2214
PPUBIRD1_2214	PWY-5940	streptomycin biosynthesis
PPUBIRD1_2214	PWY-5941	glycogen degradation II (eukaryotic)
PPUBIRD1_2214	PWY-622	starch biosynthesis
PPUBIRD1_2214	PWY-6731	starch degradation III
PPUBIRD1_2214	PWY-6737	starch degradation V
PPUBIRD1_2214	PWY-6749	CMP-legionaminate biosynthesis I
PPUBIRD1_2214	PWY-7238	sucrose biosynthesis II
PPUBIRD1_2214	PWY-7343	UDP-glucose biosynthesis
PPUBIRD1_2223	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
PPUBIRD1_2254	PWY-5074	mevalonate degradation
PPUBIRD1_2257	PWY-6215	4-chlorobenzoate degradation
PPUBIRD1_2258	PWY-4041	&gamma;-glutamyl cycle
PPUBIRD1_2258	PWY-5826	hypoglycin biosynthesis
PPUBIRD1_2263	PWY-5692	allantoin degradation to glyoxylate II
PPUBIRD1_2263	PWY-5698	allantoin degradation to ureidoglycolate II (ammonia producing)
PPUBIRD1_2284	PWY-5057	L-valine degradation II
PPUBIRD1_2284	PWY-5076	L-leucine degradation III
PPUBIRD1_2284	PWY-5078	L-isoleucine degradation II
PPUBIRD1_2284	PWY-5101	L-isoleucine biosynthesis II
PPUBIRD1_2284	PWY-5103	L-isoleucine biosynthesis III
PPUBIRD1_2284	PWY-5104	L-isoleucine biosynthesis IV
PPUBIRD1_2284	PWY-5108	L-isoleucine biosynthesis V
PPUBIRD1_2331	PWY-6823	molybdenum cofactor biosynthesis
PPUBIRD1_2335	PWY-5964	guanylyl molybdenum cofactor biosynthesis
PPUBIRD1_2373	PWY-5530	sorbitol biosynthesis II
PPUBIRD1_2373	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
PPUBIRD1_2378	PWY-5194	siroheme biosynthesis
PPUBIRD1_2378	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
PPUBIRD1_2397	PWY-7165	L-ascorbate biosynthesis VI (engineered pathway)
PPUBIRD1_2433	PWY-5663	tetrahydrobiopterin biosynthesis I
PPUBIRD1_2433	PWY-5664	tetrahydrobiopterin biosynthesis II
PPUBIRD1_2433	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
PPUBIRD1_2433	PWY-6703	preQ<sub>0</sub> biosynthesis
PPUBIRD1_2433	PWY-6983	tetrahydrobiopterin biosynthesis III
PPUBIRD1_2433	PWY-7442	drosopterin and aurodrosopterin biosynthesis
PPUBIRD1_2443	PWY-5392	reductive TCA cycle II
PPUBIRD1_2443	PWY-5537	pyruvate fermentation to acetate V
PPUBIRD1_2443	PWY-5538	pyruvate fermentation to acetate VI
PPUBIRD1_2443	PWY-5690	TCA cycle II (plants and fungi)
PPUBIRD1_2443	PWY-5913	TCA cycle VI (obligate autotrophs)
PPUBIRD1_2443	PWY-6728	methylaspartate cycle
PPUBIRD1_2443	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
PPUBIRD1_2443	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
PPUBIRD1_2451	PWY-1361	benzoyl-CoA degradation I (aerobic)
PPUBIRD1_2451	PWY-5109	2-methylbutanoate biosynthesis
PPUBIRD1_2451	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
PPUBIRD1_2451	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
PPUBIRD1_2451	PWY-5177	glutaryl-CoA degradation
PPUBIRD1_2451	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
PPUBIRD1_2451	PWY-6435	4-hydroxybenzoate biosynthesis V
PPUBIRD1_2451	PWY-6583	pyruvate fermentation to butanol I
PPUBIRD1_2451	PWY-6863	pyruvate fermentation to hexanol
PPUBIRD1_2451	PWY-6883	pyruvate fermentation to butanol II
PPUBIRD1_2451	PWY-6944	androstenedione degradation
PPUBIRD1_2451	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
PPUBIRD1_2451	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
PPUBIRD1_2451	PWY-7007	methyl ketone biosynthesis
PPUBIRD1_2451	PWY-7046	4-coumarate degradation (anaerobic)
PPUBIRD1_2451	PWY-7094	fatty acid salvage
PPUBIRD1_2451	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
PPUBIRD1_2451	PWY-735	jasmonic acid biosynthesis
PPUBIRD1_2451	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
PPUBIRD1_2452	PWY-1361	benzoyl-CoA degradation I (aerobic)
PPUBIRD1_2452	PWY-5109	2-methylbutanoate biosynthesis
PPUBIRD1_2452	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
PPUBIRD1_2452	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
PPUBIRD1_2452	PWY-5177	glutaryl-CoA degradation
PPUBIRD1_2452	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
PPUBIRD1_2452	PWY-6435	4-hydroxybenzoate biosynthesis V
PPUBIRD1_2452	PWY-6583	pyruvate fermentation to butanol I
PPUBIRD1_2452	PWY-6863	pyruvate fermentation to hexanol
PPUBIRD1_2452	PWY-6883	pyruvate fermentation to butanol II
PPUBIRD1_2452	PWY-6944	androstenedione degradation
PPUBIRD1_2452	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
PPUBIRD1_2452	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
PPUBIRD1_2452	PWY-7007	methyl ketone biosynthesis
PPUBIRD1_2452	PWY-7046	4-coumarate degradation (anaerobic)
PPUBIRD1_2452	PWY-7094	fatty acid salvage
PPUBIRD1_2452	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
PPUBIRD1_2452	PWY-735	jasmonic acid biosynthesis
PPUBIRD1_2452	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
PPUBIRD1_2469	PWY-621	sucrose degradation III (sucrose invertase)
PPUBIRD1_2490	PWY-1361	benzoyl-CoA degradation I (aerobic)
PPUBIRD1_2490	PWY-5109	2-methylbutanoate biosynthesis
PPUBIRD1_2490	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
PPUBIRD1_2490	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
PPUBIRD1_2490	PWY-5177	glutaryl-CoA degradation
PPUBIRD1_2490	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
PPUBIRD1_2490	PWY-6435	4-hydroxybenzoate biosynthesis V
PPUBIRD1_2490	PWY-6583	pyruvate fermentation to butanol I
PPUBIRD1_2490	PWY-6863	pyruvate fermentation to hexanol
PPUBIRD1_2490	PWY-6883	pyruvate fermentation to butanol II
PPUBIRD1_2490	PWY-6944	androstenedione degradation
PPUBIRD1_2490	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
PPUBIRD1_2490	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
PPUBIRD1_2490	PWY-7007	methyl ketone biosynthesis
PPUBIRD1_2490	PWY-7046	4-coumarate degradation (anaerobic)
PPUBIRD1_2490	PWY-7094	fatty acid salvage
PPUBIRD1_2490	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
PPUBIRD1_2490	PWY-735	jasmonic acid biosynthesis
PPUBIRD1_2490	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
PPUBIRD1_2492	PWY-1361	benzoyl-CoA degradation I (aerobic)
PPUBIRD1_2492	PWY-2361	3-oxoadipate degradation
PPUBIRD1_2492	PWY-6185	4-methylcatechol degradation (<i>ortho</i> cleavage)
PPUBIRD1_2493	PWY-1341	phenylacetate degradation II (anaerobic)
PPUBIRD1_2493	PWY-6318	L-phenylalanine degradation IV (mammalian, via side chain)
PPUBIRD1_2522	PWY-6840	homoglutathione biosynthesis
PPUBIRD1_2522	PWY-7255	ergothioneine biosynthesis I (bacteria)
PPUBIRD1_2552	PWY-6899	base-degraded thiamin salvage
PPUBIRD1_2552	PWY-7356	thiamin salvage IV (yeast)
PPUBIRD1_2584	PWY-381	nitrate reduction II (assimilatory)
PPUBIRD1_2584	PWY-5675	nitrate reduction V (assimilatory)
PPUBIRD1_2584	PWY-6549	L-glutamine biosynthesis III
PPUBIRD1_2584	PWY-6963	ammonia assimilation cycle I
PPUBIRD1_2584	PWY-6964	ammonia assimilation cycle II
PPUBIRD1_2590	PWY-6655	xanthan biosynthesis
PPUBIRD1_2590	PWY-6658	acetan biosynthesis
PPUBIRD1_2596	PWY-6936	seleno-amino acid biosynthesis
PPUBIRD1_2596	PWY-7274	D-cycloserine biosynthesis
PPUBIRD1_2604	PWY-3821	galactose degradation III
PPUBIRD1_2604	PWY-6317	galactose degradation I (Leloir pathway)
PPUBIRD1_2604	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
PPUBIRD1_2604	PWY-6527	stachyose degradation
PPUBIRD1_2604	PWY-7328	superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
PPUBIRD1_2604	PWY-7344	UDP-D-galactose biosynthesis
PPUBIRD1_2627	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
PPUBIRD1_2640	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
PPUBIRD1_2640	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
PPUBIRD1_2640	PWY-6164	3-dehydroquinate biosynthesis I
PPUBIRD1_2684	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
PPUBIRD1_2684	PWY-6416	quinate degradation II
PPUBIRD1_2684	PWY-6707	gallate biosynthesis
PPUBIRD1_2685	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
PPUBIRD1_2689	PWY-6654	phosphopantothenate biosynthesis III
PPUBIRD1_2691	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
PPUBIRD1_2722	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
PPUBIRD1_2723	PWY-5025	indole-3-acetate biosynthesis IV (bacteria)
PPUBIRD1_2723	PWY-581	indole-3-acetate biosynthesis II
PPUBIRD1_2723	PWY-7308	acrylonitrile degradation I
PPUBIRD1_2724	PWY-5025	indole-3-acetate biosynthesis IV (bacteria)
PPUBIRD1_2724	PWY-581	indole-3-acetate biosynthesis II
PPUBIRD1_2724	PWY-7308	acrylonitrile degradation I
PPUBIRD1_2803	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
PPUBIRD1_2806	PWY-6562	norspermidine biosynthesis
PPUBIRD1_2809	PWY-7346	UDP-&alpha;-D-glucuronate biosynthesis (from UDP-glucose)
PPUBIRD1_2810	PWY-7254	TCA cycle VII (acetate-producers)
PPUBIRD1_2818	PWY-6167	flavin biosynthesis II (archaea)
PPUBIRD1_2818	PWY-6168	flavin biosynthesis III (fungi)
PPUBIRD1_2818	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
PPUBIRD1_2821	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
PPUBIRD1_2821	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
PPUBIRD1_2832	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
PPUBIRD1_2848	PWY-5506	methanol oxidation to formaldehyde IV
PPUBIRD1_2889	PWY-5704	urea degradation II
PPUBIRD1_2890	PWY-5704	urea degradation II
PPUBIRD1_2891	PWY-5704	urea degradation II
PPUBIRD1_2933	PWY-5692	allantoin degradation to glyoxylate II
PPUBIRD1_2933	PWY-5698	allantoin degradation to ureidoglycolate II (ammonia producing)
PPUBIRD1_2975	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
PPUBIRD1_2975	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
PPUBIRD1_2975	PWY-6936	seleno-amino acid biosynthesis
PPUBIRD1_2975	PWY-702	L-methionine biosynthesis II
PPUBIRD1_2980	PWY-7533	gliotoxin biosynthesis
PPUBIRD1_3049	PWY-3161	indole-3-acetate biosynthesis III (bacteria)
PPUBIRD1_3049	PWY-5025	indole-3-acetate biosynthesis IV (bacteria)
PPUBIRD1_3049	PWY-581	indole-3-acetate biosynthesis II
PPUBIRD1_3049	PWY-7308	acrylonitrile degradation I
PPUBIRD1_3051	PWY-2941	L-lysine biosynthesis II
PPUBIRD1_3051	PWY-2942	L-lysine biosynthesis III
PPUBIRD1_3051	PWY-5097	L-lysine biosynthesis VI
PPUBIRD1_3053	PWY-6788	cellulose degradation II (fungi)
PPUBIRD1_3056	PWY-1001	cellulose biosynthesis
PPUBIRD1_3072	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
PPUBIRD1_3098	PWY-5874	heme degradation
PPUBIRD1_3098	PWY-5915	phycoerythrobilin biosynthesis I
PPUBIRD1_3098	PWY-5917	phycocyanobilin biosynthesis
PPUBIRD1_3098	PWY-7170	phytochromobilin biosynthesis
PPUBIRD1_3154	PWY-5381	pyridine nucleotide cycling (plants)
PPUBIRD1_3154	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
PPUBIRD1_3154	PWY-6596	adenosine nucleotides degradation I
PPUBIRD1_3154	PWY-6606	guanosine nucleotides degradation II
PPUBIRD1_3154	PWY-6607	guanosine nucleotides degradation I
PPUBIRD1_3154	PWY-6608	guanosine nucleotides degradation III
PPUBIRD1_3154	PWY-7185	UTP and CTP dephosphorylation I
PPUBIRD1_3155	PWY-5344	L-homocysteine biosynthesis
PPUBIRD1_3155	PWY-7174	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation II
PPUBIRD1_3173	PWY-5663	tetrahydrobiopterin biosynthesis I
PPUBIRD1_3173	PWY-5664	tetrahydrobiopterin biosynthesis II
PPUBIRD1_3173	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
PPUBIRD1_3173	PWY-6703	preQ<sub>0</sub> biosynthesis
PPUBIRD1_3173	PWY-6983	tetrahydrobiopterin biosynthesis III
PPUBIRD1_3173	PWY-7442	drosopterin and aurodrosopterin biosynthesis
PPUBIRD1_3247	PWY-6823	molybdenum cofactor biosynthesis
PPUBIRD1_3247	PWY-6891	thiazole biosynthesis II (Bacillus)
PPUBIRD1_3247	PWY-6892	thiazole biosynthesis I (E. coli)
PPUBIRD1_3247	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
PPUBIRD1_3277	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
PPUBIRD1_3277	PWY-6416	quinate degradation II
PPUBIRD1_3277	PWY-6707	gallate biosynthesis
PPUBIRD1_3278	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
PPUBIRD1_3310	PWY-2201	folate transformations I
PPUBIRD1_3310	PWY-3841	folate transformations II
PPUBIRD1_3315	PWY-6683	sulfate reduction III (assimilatory)
PPUBIRD1_3347	PWY-5747	2-methylcitrate cycle II
PPUBIRD1_3352	PWY-5747	2-methylcitrate cycle II
PPUBIRD1_3357	PWY-5958	acridone alkaloid biosynthesis
PPUBIRD1_3357	PWY-6543	4-aminobenzoate biosynthesis
PPUBIRD1_3357	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
PPUBIRD1_3357	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
PPUBIRD1_3357	PWY-6722	candicidin biosynthesis
PPUBIRD1_3361	PWY-6654	phosphopantothenate biosynthesis III
PPUBIRD1_3362	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
PPUBIRD1_3362	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
PPUBIRD1_3362	PWY-6164	3-dehydroquinate biosynthesis I
PPUBIRD1_3388	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
PPUBIRD1_3388	PWY-2201	folate transformations I
PPUBIRD1_3388	PWY-3841	folate transformations II
PPUBIRD1_3388	PWY-5030	L-histidine degradation III
PPUBIRD1_3388	PWY-5497	purine nucleobases degradation II (anaerobic)
PPUBIRD1_3388	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
PPUBIRD1_3442	PWY-6832	2-aminoethylphosphonate degradation II
PPUBIRD1_3455	PWY-40	putrescine biosynthesis I
PPUBIRD1_3455	PWY-6305	putrescine biosynthesis IV
PPUBIRD1_3466	PWY-1881	formate oxidation to CO<sub>2</sub>
PPUBIRD1_3466	PWY-5497	purine nucleobases degradation II (anaerobic)
PPUBIRD1_3466	PWY-6696	oxalate degradation III
PPUBIRD1_3473	PWY-381	nitrate reduction II (assimilatory)
PPUBIRD1_3473	PWY-5675	nitrate reduction V (assimilatory)
PPUBIRD1_3473	PWY-6549	L-glutamine biosynthesis III
PPUBIRD1_3473	PWY-6963	ammonia assimilation cycle I
PPUBIRD1_3473	PWY-6964	ammonia assimilation cycle II
PPUBIRD1_3484	PWY-3461	L-tyrosine biosynthesis II
PPUBIRD1_3484	PWY-3462	L-phenylalanine biosynthesis II
PPUBIRD1_3484	PWY-6120	L-tyrosine biosynthesis III
PPUBIRD1_3484	PWY-6627	salinosporamide A biosynthesis
PPUBIRD1_3486	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
PPUBIRD1_3486	PWY-5723	Rubisco shunt
PPUBIRD1_3494	PWY-6700	queuosine biosynthesis
PPUBIRD1_3503	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
PPUBIRD1_3505	PWY-1042	glycolysis IV (plant cytosol)
PPUBIRD1_3505	PWY-5484	glycolysis II (from fructose 6-phosphate)
PPUBIRD1_3505	PWY-6901	superpathway of glucose and xylose degradation
PPUBIRD1_3505	PWY-7003	glycerol degradation to butanol
PPUBIRD1_3509	PWY-6902	chitin degradation II
PPUBIRD1_3517	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
PPUBIRD1_3517	PWY-6435	4-hydroxybenzoate biosynthesis V
PPUBIRD1_3517	PWY-6863	pyruvate fermentation to hexanol
PPUBIRD1_3517	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
PPUBIRD1_3517	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
PPUBIRD1_3517	PWY-6948	sitosterol degradation to androstenedione
PPUBIRD1_3517	PWY-7094	fatty acid salvage
PPUBIRD1_3517	PWY-7288	fatty acid &beta;-oxidation (peroxisome, yeast)
PPUBIRD1_3517	PWY-7337	10-<i>cis</i>-heptadecenoyl-CoA degradation (yeast)
PPUBIRD1_3517	PWY-7338	10-<i>trans</i>-heptadecenoyl-CoA degradation (reductase-dependent, yeast)
PPUBIRD1_3517	PWY-7339	10-<i>trans</i>-heptadecenoyl-CoA degradation (MFE-dependent, yeast)
PPUBIRD1_3517	PWY-7340	9-<i>cis</i>, 11-<i>trans</i>-octadecadienoyl-CoA degradation (isomerase-dependent, yeast)
PPUBIRD1_3517	PWY-735	jasmonic acid biosynthesis
PPUBIRD1_3518	PWY-1361	benzoyl-CoA degradation I (aerobic)
PPUBIRD1_3518	PWY-5109	2-methylbutanoate biosynthesis
PPUBIRD1_3518	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
PPUBIRD1_3518	PWY-5137	fatty acid &beta;-oxidation III (unsaturated, odd number)
PPUBIRD1_3518	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
PPUBIRD1_3518	PWY-5177	glutaryl-CoA degradation
PPUBIRD1_3518	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
PPUBIRD1_3518	PWY-6435	4-hydroxybenzoate biosynthesis V
PPUBIRD1_3518	PWY-6583	pyruvate fermentation to butanol I
PPUBIRD1_3518	PWY-6837	fatty acid beta-oxidation V (unsaturated, odd number, di-isomerase-dependent)
PPUBIRD1_3518	PWY-6863	pyruvate fermentation to hexanol
PPUBIRD1_3518	PWY-6883	pyruvate fermentation to butanol II
PPUBIRD1_3518	PWY-6944	androstenedione degradation
PPUBIRD1_3518	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
PPUBIRD1_3518	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
PPUBIRD1_3518	PWY-7007	methyl ketone biosynthesis
PPUBIRD1_3518	PWY-7046	4-coumarate degradation (anaerobic)
PPUBIRD1_3518	PWY-7094	fatty acid salvage
PPUBIRD1_3518	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
PPUBIRD1_3518	PWY-7291	oleate &beta;-oxidation (isomerase-dependent, yeast)
PPUBIRD1_3518	PWY-735	jasmonic acid biosynthesis
PPUBIRD1_3518	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
PPUBIRD1_3530	PWY-6823	molybdenum cofactor biosynthesis
PPUBIRD1_3543	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
PPUBIRD1_3554	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
PPUBIRD1_3554	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
PPUBIRD1_3557	PWY-5686	UMP biosynthesis
PPUBIRD1_3562	PWY-5194	siroheme biosynthesis
PPUBIRD1_3562	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
PPUBIRD1_3571	PWY-5484	glycolysis II (from fructose 6-phosphate)
PPUBIRD1_3574	PWY-5022	4-aminobutanoate degradation V
PPUBIRD1_3574	PWY-6728	methylaspartate cycle
PPUBIRD1_3574	PWY-7126	ethylene biosynthesis IV
PPUBIRD1_3577	PWY-2941	L-lysine biosynthesis II
PPUBIRD1_3577	PWY-2942	L-lysine biosynthesis III
PPUBIRD1_3577	PWY-5097	L-lysine biosynthesis VI
PPUBIRD1_3603	PWY-1361	benzoyl-CoA degradation I (aerobic)
PPUBIRD1_3603	PWY-5109	2-methylbutanoate biosynthesis
PPUBIRD1_3603	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
PPUBIRD1_3603	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
PPUBIRD1_3603	PWY-5177	glutaryl-CoA degradation
PPUBIRD1_3603	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
PPUBIRD1_3603	PWY-6435	4-hydroxybenzoate biosynthesis V
PPUBIRD1_3603	PWY-6583	pyruvate fermentation to butanol I
PPUBIRD1_3603	PWY-6863	pyruvate fermentation to hexanol
PPUBIRD1_3603	PWY-6883	pyruvate fermentation to butanol II
PPUBIRD1_3603	PWY-6944	androstenedione degradation
PPUBIRD1_3603	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
PPUBIRD1_3603	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
PPUBIRD1_3603	PWY-7007	methyl ketone biosynthesis
PPUBIRD1_3603	PWY-7046	4-coumarate degradation (anaerobic)
PPUBIRD1_3603	PWY-7094	fatty acid salvage
PPUBIRD1_3603	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
PPUBIRD1_3603	PWY-735	jasmonic acid biosynthesis
PPUBIRD1_3603	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
PPUBIRD1_3639	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
PPUBIRD1_3639	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
PPUBIRD1_3639	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
PPUBIRD1_3670	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
PPUBIRD1_3670	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
PPUBIRD1_3670	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
PPUBIRD1_3670	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
PPUBIRD1_3673	PWY-2161	folate polyglutamylation
PPUBIRD1_3674	PWY-4381	fatty acid biosynthesis initiation I
PPUBIRD1_3674	PWY-5743	3-hydroxypropanoate cycle
PPUBIRD1_3674	PWY-5744	glyoxylate assimilation
PPUBIRD1_3674	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
PPUBIRD1_3674	PWY-6679	jadomycin biosynthesis
PPUBIRD1_3674	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
PPUBIRD1_3678	PWY-2941	L-lysine biosynthesis II
PPUBIRD1_3678	PWY-2942	L-lysine biosynthesis III
PPUBIRD1_3678	PWY-5097	L-lysine biosynthesis VI
PPUBIRD1_3678	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
PPUBIRD1_3678	PWY-6559	spermidine biosynthesis II
PPUBIRD1_3678	PWY-6562	norspermidine biosynthesis
PPUBIRD1_3678	PWY-7153	grixazone biosynthesis
PPUBIRD1_3678	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
PPUBIRD1_3679	PWY-2941	L-lysine biosynthesis II
PPUBIRD1_3679	PWY-2942	L-lysine biosynthesis III
PPUBIRD1_3679	PWY-5097	L-lysine biosynthesis VI
PPUBIRD1_3679	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
PPUBIRD1_3679	PWY-6559	spermidine biosynthesis II
PPUBIRD1_3679	PWY-6562	norspermidine biosynthesis
PPUBIRD1_3679	PWY-7153	grixazone biosynthesis
PPUBIRD1_3679	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
PPUBIRD1_3680	PWY-7396	butanol and isobutanol biosynthesis (engineered)
PPUBIRD1_3692	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
PPUBIRD1_3696	PWY-5913	TCA cycle VI (obligate autotrophs)
PPUBIRD1_3696	PWY-6318	L-phenylalanine degradation IV (mammalian, via side chain)
PPUBIRD1_3696	PWY-6638	sulfolactate degradation III
PPUBIRD1_3696	PWY-6642	(<i>R</i>)-cysteate degradation
PPUBIRD1_3696	PWY-6643	coenzyme M biosynthesis II
PPUBIRD1_3696	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
PPUBIRD1_3696	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
PPUBIRD1_3696	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
PPUBIRD1_3700	PWY-6823	molybdenum cofactor biosynthesis
PPUBIRD1_3704	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
PPUBIRD1_3704	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
PPUBIRD1_3704	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
PPUBIRD1_3704	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
PPUBIRD1_3704	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
PPUBIRD1_3704	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
PPUBIRD1_3706	PWY-6543	4-aminobenzoate biosynthesis
PPUBIRD1_3706	PWY-6722	candicidin biosynthesis
PPUBIRD1_3709	PWY-5367	petroselinate biosynthesis
PPUBIRD1_3709	PWY-5971	palmitate biosynthesis II (bacteria and plants)
PPUBIRD1_3709	PWY-5973	<i>cis</i>-vaccenate biosynthesis
PPUBIRD1_3709	PWY-5989	stearate biosynthesis II (bacteria and plants)
PPUBIRD1_3709	PWY-5994	palmitate biosynthesis I (animals and fungi)
PPUBIRD1_3709	PWY-6113	superpathway of mycolate biosynthesis
PPUBIRD1_3709	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
PPUBIRD1_3709	PWY-6519	8-amino-7-oxononanoate biosynthesis I
PPUBIRD1_3709	PWY-6951	PPUBIRD1_3709
PPUBIRD1_3709	PWY-7053	docosahexaenoate biosynthesis I (lower eukaryotes)
PPUBIRD1_3709	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
PPUBIRD1_3709	PWYG-321	mycolate biosynthesis
PPUBIRD1_3710	PWY-4381	fatty acid biosynthesis initiation I
PPUBIRD1_3710	PWY-6799	fatty acid biosynthesis (plant mitochondria)
PPUBIRD1_3710	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
PPUBIRD1_3720	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
PPUBIRD1_3720	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
PPUBIRD1_3722	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
PPUBIRD1_3722	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
PPUBIRD1_3749	PWY-6164	3-dehydroquinate biosynthesis I
PPUBIRD1_3767	PWY-5667	CDP-diacylglycerol biosynthesis I
PPUBIRD1_3767	PWY-5981	CDP-diacylglycerol biosynthesis III
PPUBIRD1_3767	PWY-7411	superpathway of phosphatidate biosynthesis (yeast)
PPUBIRD1_3767	PWY-7417	phospholipid remodeling (phosphatidate, yeast)
PPUBIRD1_3780	PWY-4361	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation
PPUBIRD1_3782	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
PPUBIRD1_3789	PWY-5663	tetrahydrobiopterin biosynthesis I
PPUBIRD1_3789	PWY-5664	tetrahydrobiopterin biosynthesis II
PPUBIRD1_3789	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
PPUBIRD1_3789	PWY-6703	preQ<sub>0</sub> biosynthesis
PPUBIRD1_3789	PWY-6983	tetrahydrobiopterin biosynthesis III
PPUBIRD1_3789	PWY-7442	drosopterin and aurodrosopterin biosynthesis
PPUBIRD1_3797	PWY-5686	UMP biosynthesis
PPUBIRD1_3800	PWY-7335	UDP-<i>N</i>-acetyl-&alpha;-D-mannosaminouronate biosynthesis
PPUBIRD1_3810	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
PPUBIRD1_3810	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
PPUBIRD1_3811	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
PPUBIRD1_3811	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
PPUBIRD1_3825	PWY-3221	dTDP-L-rhamnose biosynthesis II
PPUBIRD1_3825	PWY-6808	dTDP-D-forosamine biosynthesis
PPUBIRD1_3825	PWY-6942	dTDP-D-desosamine biosynthesis
PPUBIRD1_3825	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
PPUBIRD1_3825	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
PPUBIRD1_3825	PWY-6974	dTDP-L-olivose biosynthesis
PPUBIRD1_3825	PWY-6976	dTDP-L-mycarose biosynthesis
PPUBIRD1_3825	PWY-7104	dTDP-L-megosamine biosynthesis
PPUBIRD1_3825	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
PPUBIRD1_3825	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
PPUBIRD1_3825	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
PPUBIRD1_3825	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
PPUBIRD1_3825	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
PPUBIRD1_3825	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
PPUBIRD1_3825	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
PPUBIRD1_3825	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
PPUBIRD1_3827	PWY-3221	dTDP-L-rhamnose biosynthesis II
PPUBIRD1_3827	PWY-6808	dTDP-D-forosamine biosynthesis
PPUBIRD1_3827	PWY-6942	dTDP-D-desosamine biosynthesis
PPUBIRD1_3827	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
PPUBIRD1_3827	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
PPUBIRD1_3827	PWY-6974	dTDP-L-olivose biosynthesis
PPUBIRD1_3827	PWY-6976	dTDP-L-mycarose biosynthesis
PPUBIRD1_3827	PWY-7104	dTDP-L-megosamine biosynthesis
PPUBIRD1_3827	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
PPUBIRD1_3827	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
PPUBIRD1_3827	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
PPUBIRD1_3827	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
PPUBIRD1_3827	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
PPUBIRD1_3827	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
PPUBIRD1_3827	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
PPUBIRD1_3827	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
PPUBIRD1_3829	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
PPUBIRD1_3829	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
PPUBIRD1_3829	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
PPUBIRD1_3833	PWY-3821	galactose degradation III
PPUBIRD1_3833	PWY-6317	galactose degradation I (Leloir pathway)
PPUBIRD1_3833	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
PPUBIRD1_3833	PWY-6527	stachyose degradation
PPUBIRD1_3833	PWY-7328	superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
PPUBIRD1_3833	PWY-7344	UDP-D-galactose biosynthesis
PPUBIRD1_3842	PWY-7205	CMP phosphorylation
PPUBIRD1_3843	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
PPUBIRD1_3844	PWY-3461	L-tyrosine biosynthesis II
PPUBIRD1_3844	PWY-3462	L-phenylalanine biosynthesis II
PPUBIRD1_3844	PWY-6120	L-tyrosine biosynthesis III
PPUBIRD1_3844	PWY-6627	salinosporamide A biosynthesis
PPUBIRD1_3844	PWY-7432	L-phenylalanine biosynthesis III (cytosolic, plants)
PPUBIRD1_3847	PWY-4361	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation
PPUBIRD1_3847	PWY-7174	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation II
PPUBIRD1_3848	PWY-5855	ubiquinol-7 biosynthesis (prokaryotic)
PPUBIRD1_3848	PWY-5856	ubiquinol-9 biosynthesis (prokaryotic)
PPUBIRD1_3848	PWY-5857	ubiquinol-10 biosynthesis (prokaryotic)
PPUBIRD1_3848	PWY-5870	ubiquinol-8 biosynthesis (eukaryotic)
PPUBIRD1_3848	PWY-5871	ubiquinol-9 biosynthesis (eukaryotic)
PPUBIRD1_3848	PWY-5872	ubiquinol-10 biosynthesis (eukaryotic)
PPUBIRD1_3848	PWY-5873	ubiquinol-7 biosynthesis (eukaryotic)
PPUBIRD1_3848	PWY-6708	ubiquinol-8 biosynthesis (prokaryotic)
PPUBIRD1_3848	PWY-7230	ubiquinol-6 biosynthesis from 4-aminobenzoate (eukaryotic)
PPUBIRD1_3848	PWY-7233	ubiquinol-6 bypass biosynthesis (eukaryotic)
PPUBIRD1_3849	PWY-181	photorespiration
PPUBIRD1_3858	PWY-5392	reductive TCA cycle II
PPUBIRD1_3858	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
PPUBIRD1_3858	PWY-5690	TCA cycle II (plants and fungi)
PPUBIRD1_3858	PWY-5913	TCA cycle VI (obligate autotrophs)
PPUBIRD1_3858	PWY-6728	methylaspartate cycle
PPUBIRD1_3858	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
PPUBIRD1_3858	PWY-7254	TCA cycle VII (acetate-producers)
PPUBIRD1_3858	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
PPUBIRD1_3912	PWY-6683	sulfate reduction III (assimilatory)
PPUBIRD1_3936	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
PPUBIRD1_3936	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
PPUBIRD1_3936	PWY-6269	adenosylcobalamin salvage from cobinamide II
PPUBIRD1_3938	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
PPUBIRD1_3938	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
PPUBIRD1_3938	PWY-6269	adenosylcobalamin salvage from cobinamide II
PPUBIRD1_3939	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
PPUBIRD1_3939	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
PPUBIRD1_3939	PWY-6269	adenosylcobalamin salvage from cobinamide II
PPUBIRD1_3941	PWY-5443	aminopropanol phosphate biosynthesis I
PPUBIRD1_3943	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
PPUBIRD1_3943	PWY-5523	5,6-dimethylbenzimidazole biosynthesis
PPUBIRD1_3945	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
PPUBIRD1_3945	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
PPUBIRD1_3945	PWY-6268	adenosylcobalamin salvage from cobalamin
PPUBIRD1_3945	PWY-6269	adenosylcobalamin salvage from cobinamide II
PPUBIRD1_3952	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
PPUBIRD1_3952	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
PPUBIRD1_3952	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
PPUBIRD1_3953	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
PPUBIRD1_3953	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
PPUBIRD1_3963	PWY-6936	seleno-amino acid biosynthesis
PPUBIRD1_3971	PWY-4202	arsenate detoxification I (glutaredoxin)
PPUBIRD1_3971	PWY-4621	arsenate detoxification II (glutaredoxin)
PPUBIRD1_3972	PWY-6785	hydrogen production VIII
PPUBIRD1_3980	PWY-7039	phosphatidate metabolism, as a signaling molecule
PPUBIRD1_3995	PWY-5381	pyridine nucleotide cycling (plants)
PPUBIRD1_3995	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
PPUBIRD1_3995	PWY-6596	adenosine nucleotides degradation I
PPUBIRD1_3995	PWY-6606	guanosine nucleotides degradation II
PPUBIRD1_3995	PWY-6607	guanosine nucleotides degradation I
PPUBIRD1_3995	PWY-6608	guanosine nucleotides degradation III
PPUBIRD1_3995	PWY-7185	UTP and CTP dephosphorylation I
PPUBIRD1_3997	PWY-7560	methylerythritol phosphate pathway II
PPUBIRD1_3998	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
PPUBIRD1_3999	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
PPUBIRD1_3999	PWY-3162	L-tryptophan degradation V (side chain pathway)
PPUBIRD1_3999	PWY-5057	L-valine degradation II
PPUBIRD1_3999	PWY-5076	L-leucine degradation III
PPUBIRD1_3999	PWY-5078	L-isoleucine degradation II
PPUBIRD1_3999	PWY-5079	L-phenylalanine degradation III
PPUBIRD1_3999	PWY-5082	L-methionine degradation III
PPUBIRD1_3999	PWY-5480	pyruvate fermentation to ethanol I
PPUBIRD1_3999	PWY-5486	pyruvate fermentation to ethanol II
PPUBIRD1_3999	PWY-5751	phenylethanol biosynthesis
PPUBIRD1_3999	PWY-6028	acetoin degradation
PPUBIRD1_3999	PWY-6313	serotonin degradation
PPUBIRD1_3999	PWY-6333	acetaldehyde biosynthesis I
PPUBIRD1_3999	PWY-6342	noradrenaline and adrenaline degradation
PPUBIRD1_3999	PWY-6587	pyruvate fermentation to ethanol III
PPUBIRD1_3999	PWY-6802	salidroside biosynthesis
PPUBIRD1_3999	PWY-6871	3-methylbutanol biosynthesis
PPUBIRD1_3999	PWY-7013	L-1,2-propanediol degradation
PPUBIRD1_3999	PWY-7111	pyruvate fermentation to isobutanol (engineered)
PPUBIRD1_3999	PWY-7118	chitin degradation to ethanol
PPUBIRD1_3999	PWY-7396	butanol and isobutanol biosynthesis (engineered)
PPUBIRD1_3999	PWY-7557	dehydrodiconiferyl alcohol degradation
PPUBIRD1_4001	PWY-7560	methylerythritol phosphate pathway II
PPUBIRD1_4003	PWY-1042	glycolysis IV (plant cytosol)
PPUBIRD1_4003	PWY-1622	formaldehyde assimilation I (serine pathway)
PPUBIRD1_4003	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
PPUBIRD1_4003	PWY-5484	glycolysis II (from fructose 6-phosphate)
PPUBIRD1_4003	PWY-5723	Rubisco shunt
PPUBIRD1_4003	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
PPUBIRD1_4003	PWY-6886	1-butanol autotrophic biosynthesis
PPUBIRD1_4003	PWY-6901	superpathway of glucose and xylose degradation
PPUBIRD1_4003	PWY-7003	glycerol degradation to butanol
PPUBIRD1_4003	PWY-7124	ethylene biosynthesis V (engineered)
PPUBIRD1_4003	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
PPUBIRD1_4004	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
PPUBIRD1_4004	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
PPUBIRD1_4005	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
PPUBIRD1_4005	PWY-7177	UTP and CTP dephosphorylation II
PPUBIRD1_4005	PWY-7185	UTP and CTP dephosphorylation I
PPUBIRD1_4008	PWY-4381	fatty acid biosynthesis initiation I
PPUBIRD1_4008	PWY-5743	3-hydroxypropanoate cycle
PPUBIRD1_4008	PWY-5744	glyoxylate assimilation
PPUBIRD1_4008	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
PPUBIRD1_4008	PWY-6679	jadomycin biosynthesis
PPUBIRD1_4008	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
PPUBIRD1_4013	PWY-5971	palmitate biosynthesis II (bacteria and plants)
PPUBIRD1_4013	PWY-5973	<i>cis</i>-vaccenate biosynthesis
PPUBIRD1_4013	PWY-5989	stearate biosynthesis II (bacteria and plants)
PPUBIRD1_4013	PWY-5994	palmitate biosynthesis I (animals and fungi)
PPUBIRD1_4013	PWY-6113	superpathway of mycolate biosynthesis
PPUBIRD1_4013	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
PPUBIRD1_4013	PWY-6519	8-amino-7-oxononanoate biosynthesis I
PPUBIRD1_4013	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
PPUBIRD1_4013	PWYG-321	mycolate biosynthesis
PPUBIRD1_4018	PWY-7560	methylerythritol phosphate pathway II
PPUBIRD1_4040	PWY-5667	CDP-diacylglycerol biosynthesis I
PPUBIRD1_4040	PWY-7411	superpathway of phosphatidate biosynthesis (yeast)
PPUBIRD1_4053	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
PPUBIRD1_4054	PWY-1622	formaldehyde assimilation I (serine pathway)
PPUBIRD1_4054	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
PPUBIRD1_4054	PWY-5913	TCA cycle VI (obligate autotrophs)
PPUBIRD1_4054	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
PPUBIRD1_4054	PWY-6146	<i>Methanobacterium thermoautotrophicum</i> biosynthetic metabolism
PPUBIRD1_4054	PWY-6549	L-glutamine biosynthesis III
PPUBIRD1_4054	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
PPUBIRD1_4054	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
PPUBIRD1_4054	PWY-7124	ethylene biosynthesis V (engineered)
PPUBIRD1_4095	PWY-6829	tRNA methylation (yeast)
PPUBIRD1_4095	PWY-7285	methylwyosine biosynthesis
PPUBIRD1_4095	PWY-7286	7-(3-amino-3-carboxypropyl)-wyosine biosynthesis
PPUBIRD1_4131	PWY-5316	nicotine biosynthesis
PPUBIRD1_4131	PWY-7342	superpathway of nicotine biosynthesis
PPUBIRD1_4171	PWY-6339	syringate degradation
PPUBIRD1_4180	PWY-6185	4-methylcatechol degradation (<i>ortho</i> cleavage)
PPUBIRD1_4181	PWY-6123	inosine-5'-phosphate biosynthesis I
PPUBIRD1_4181	PWY-6124	inosine-5'-phosphate biosynthesis II
PPUBIRD1_4181	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
PPUBIRD1_4181	PWY-7234	inosine-5'-phosphate biosynthesis III
PPUBIRD1_4183	PWY-1361	benzoyl-CoA degradation I (aerobic)
PPUBIRD1_4183	PWY-2361	3-oxoadipate degradation
PPUBIRD1_4183	PWY-6185	4-methylcatechol degradation (<i>ortho</i> cleavage)
PPUBIRD1_4195	PWY-2201	folate transformations I
PPUBIRD1_4195	PWY-5497	purine nucleobases degradation II (anaerobic)
PPUBIRD1_4200	PWY-1042	glycolysis IV (plant cytosol)
PPUBIRD1_4200	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
PPUBIRD1_4200	PWY-5484	glycolysis II (from fructose 6-phosphate)
PPUBIRD1_4200	PWY-5723	Rubisco shunt
PPUBIRD1_4200	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
PPUBIRD1_4200	PWY-6886	1-butanol autotrophic biosynthesis
PPUBIRD1_4200	PWY-6901	superpathway of glucose and xylose degradation
PPUBIRD1_4200	PWY-7003	glycerol degradation to butanol
PPUBIRD1_4200	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
PPUBIRD1_4200	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
PPUBIRD1_4211	PWY-6654	phosphopantothenate biosynthesis III
PPUBIRD1_4213	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
PPUBIRD1_4213	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
PPUBIRD1_4213	PWY-6268	adenosylcobalamin salvage from cobalamin
PPUBIRD1_4213	PWY-6269	adenosylcobalamin salvage from cobinamide II
PPUBIRD1_4214	PWY-6502	oxidized GTP and dGTP detoxification
PPUBIRD1_4214	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
PPUBIRD1_4214	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
PPUBIRD1_4214	PWY-6897	thiamin salvage II
PPUBIRD1_4214	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
PPUBIRD1_4214	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
PPUBIRD1_4214	PWY-7353	4-methyl-5(&beta;-hydroxyethyl)thiazole salvage (yeast)
PPUBIRD1_4214	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
PPUBIRD1_4216	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
PPUBIRD1_4224	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
PPUBIRD1_4224	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
PPUBIRD1_4225	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
PPUBIRD1_4225	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
PPUBIRD1_4226	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
PPUBIRD1_4226	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
PPUBIRD1_4226	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
PPUBIRD1_4226	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
PPUBIRD1_4228	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
PPUBIRD1_4228	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
PPUBIRD1_4229	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
PPUBIRD1_4229	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
PPUBIRD1_4229	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
PPUBIRD1_4230	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
PPUBIRD1_4230	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
PPUBIRD1_4239	PWY-6478	GDP-D-<i>glycero</i>-&alpha;-D-<i>manno</i>-heptose biosynthesis
PPUBIRD1_4245	PWY-3781	aerobic respiration I (cytochrome c)
PPUBIRD1_4245	PWY-6692	Fe(II) oxidation
PPUBIRD1_4245	PWY-7082	ammonia oxidation IV (autotrophic ammonia oxidizers)
PPUBIRD1_4245	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
PPUBIRD1_4256	PWY-5278	sulfite oxidation III
PPUBIRD1_4256	PWY-5340	sulfate activation for sulfonation
PPUBIRD1_4256	PWY-6683	sulfate reduction III (assimilatory)
PPUBIRD1_4256	PWY-6932	selenate reduction
PPUBIRD1_4257	PWY-5278	sulfite oxidation III
PPUBIRD1_4257	PWY-5340	sulfate activation for sulfonation
PPUBIRD1_4257	PWY-6683	sulfate reduction III (assimilatory)
PPUBIRD1_4257	PWY-6932	selenate reduction
PPUBIRD1_4258	PWY-5663	tetrahydrobiopterin biosynthesis I
PPUBIRD1_4258	PWY-5664	tetrahydrobiopterin biosynthesis II
PPUBIRD1_4258	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
PPUBIRD1_4258	PWY-6703	preQ<sub>0</sub> biosynthesis
PPUBIRD1_4258	PWY-6983	tetrahydrobiopterin biosynthesis III
PPUBIRD1_4258	PWY-7442	drosopterin and aurodrosopterin biosynthesis
PPUBIRD1_4267	PWY-6823	molybdenum cofactor biosynthesis
PPUBIRD1_4273	PWY-6073	alginate biosynthesis I (algal)
PPUBIRD1_4273	PWY-6082	alginate biosynthesis II (bacterial)
PPUBIRD1_4280	PWY-6986	alginate degradation
PPUBIRD1_4284	PWY-5659	GDP-mannose biosynthesis
PPUBIRD1_4284	PWY-6073	alginate biosynthesis I (algal)
PPUBIRD1_4284	PWY-6082	alginate biosynthesis II (bacterial)
PPUBIRD1_4284	PWY-882	L-ascorbate biosynthesis I (L-galactose pathway)
PPUBIRD1_4334	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
PPUBIRD1_4334	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
PPUBIRD1_4334	PWY-6936	seleno-amino acid biosynthesis
PPUBIRD1_4334	PWY-702	L-methionine biosynthesis II
PPUBIRD1_4355	PWY-4041	&gamma;-glutamyl cycle
PPUBIRD1_4355	PWY-5826	hypoglycin biosynthesis
PPUBIRD1_4363	PWY-5692	allantoin degradation to glyoxylate II
PPUBIRD1_4363	PWY-5698	allantoin degradation to ureidoglycolate II (ammonia producing)
PPUBIRD1_4365	PWY-5642	2,4-dinitrotoluene degradation
PPUBIRD1_4365	PWY-6373	acrylate degradation
PPUBIRD1_4377	PWY-5669	phosphatidylethanolamine biosynthesis I
PPUBIRD1_4378	PWY-5101	L-isoleucine biosynthesis II
PPUBIRD1_4378	PWY-5103	L-isoleucine biosynthesis III
PPUBIRD1_4378	PWY-5104	L-isoleucine biosynthesis IV
PPUBIRD1_4378	PWY-7111	pyruvate fermentation to isobutanol (engineered)
PPUBIRD1_4379	PWY-5101	L-isoleucine biosynthesis II
PPUBIRD1_4379	PWY-5103	L-isoleucine biosynthesis III
PPUBIRD1_4379	PWY-5104	L-isoleucine biosynthesis IV
PPUBIRD1_4379	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
PPUBIRD1_4379	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
PPUBIRD1_4379	PWY-6389	(<i>S</i>)-acetoin biosynthesis
PPUBIRD1_4379	PWY-7111	pyruvate fermentation to isobutanol (engineered)
PPUBIRD1_4380	PWY-5101	L-isoleucine biosynthesis II
PPUBIRD1_4380	PWY-5103	L-isoleucine biosynthesis III
PPUBIRD1_4380	PWY-5104	L-isoleucine biosynthesis IV
PPUBIRD1_4380	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
PPUBIRD1_4380	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
PPUBIRD1_4380	PWY-6389	(<i>S</i>)-acetoin biosynthesis
PPUBIRD1_4380	PWY-7111	pyruvate fermentation to isobutanol (engineered)
PPUBIRD1_4383	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
PPUBIRD1_4383	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
PPUBIRD1_4383	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
PPUBIRD1_4383	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
PPUBIRD1_4399	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
PPUBIRD1_4399	PWY-6148	tetrahydromethanopterin biosynthesis
PPUBIRD1_4399	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
PPUBIRD1_4399	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
PPUBIRD1_4400	PWY-6654	phosphopantothenate biosynthesis III
PPUBIRD1_4402	PWY-3801	sucrose degradation II (sucrose synthase)
PPUBIRD1_4402	PWY-5054	sorbitol biosynthesis I
PPUBIRD1_4402	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
PPUBIRD1_4402	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
PPUBIRD1_4402	PWY-5659	GDP-mannose biosynthesis
PPUBIRD1_4402	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
PPUBIRD1_4402	PWY-621	sucrose degradation III (sucrose invertase)
PPUBIRD1_4402	PWY-622	starch biosynthesis
PPUBIRD1_4402	PWY-6531	mannitol cycle
PPUBIRD1_4402	PWY-6981	chitin biosynthesis
PPUBIRD1_4402	PWY-7238	sucrose biosynthesis II
PPUBIRD1_4402	PWY-7347	sucrose biosynthesis III
PPUBIRD1_4402	PWY-7385	1,3-propanediol biosynthesis (engineered)
PPUBIRD1_4403	PWY-6672	<i>cis</i>-genanyl-CoA degradation
PPUBIRD1_4403	PWY-7118	chitin degradation to ethanol
PPUBIRD1_4417	PWY-1042	glycolysis IV (plant cytosol)
PPUBIRD1_4417	PWY-5484	glycolysis II (from fructose 6-phosphate)
PPUBIRD1_4417	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
PPUBIRD1_4417	PWY-7003	glycerol degradation to butanol
PPUBIRD1_4418	PWY-6749	CMP-legionaminate biosynthesis I
PPUBIRD1_4419	PWY-6614	tetrahydrofolate biosynthesis
PPUBIRD1_4425	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
PPUBIRD1_4425	PWY-5686	UMP biosynthesis
PPUBIRD1_4425	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
PPUBIRD1_4426	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
PPUBIRD1_4426	PWY-5686	UMP biosynthesis
PPUBIRD1_4426	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
PPUBIRD1_4427	PWY-2941	L-lysine biosynthesis II
PPUBIRD1_4427	PWY-2942	L-lysine biosynthesis III
PPUBIRD1_4427	PWY-5097	L-lysine biosynthesis VI
PPUBIRD1_4440	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
PPUBIRD1_4440	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
PPUBIRD1_4510	PWY-6499	D-glucarate degradation II
PPUBIRD1_4551	PWY-6703	preQ<sub>0</sub> biosynthesis
PPUBIRD1_4562	PWY-6617	adenosine nucleotides degradation III
PPUBIRD1_4566	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
PPUBIRD1_4566	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
PPUBIRD1_4566	PWY-6897	thiamin salvage II
PPUBIRD1_4566	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
PPUBIRD1_4566	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
PPUBIRD1_4566	PWY-7353	4-methyl-5(&beta;-hydroxyethyl)thiazole salvage (yeast)
PPUBIRD1_4566	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
PPUBIRD1_4567	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
PPUBIRD1_4583	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
PPUBIRD1_4583	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
PPUBIRD1_4583	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
PPUBIRD1_4584	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
PPUBIRD1_4584	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
PPUBIRD1_4586	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
PPUBIRD1_4586	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
PPUBIRD1_4593	PWY-5381	pyridine nucleotide cycling (plants)
PPUBIRD1_4593	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
PPUBIRD1_4605	PWY-6123	inosine-5'-phosphate biosynthesis I
PPUBIRD1_4605	PWY-6124	inosine-5'-phosphate biosynthesis II
PPUBIRD1_4605	PWY-7234	inosine-5'-phosphate biosynthesis III
PPUBIRD1_4607	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
PPUBIRD1_4607	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
PPUBIRD1_4607	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
PPUBIRD1_4613	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
PPUBIRD1_4614	PWY-5194	siroheme biosynthesis
PPUBIRD1_4614	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
PPUBIRD1_4616	PWY-6683	sulfate reduction III (assimilatory)
PPUBIRD1_4617	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
PPUBIRD1_4618	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
PPUBIRD1_4656	PWY-5381	pyridine nucleotide cycling (plants)
PPUBIRD1_4676	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
PPUBIRD1_4682	PWY-2781	<i>cis</i>-zeatin biosynthesis
PPUBIRD1_4694	PWY-5350	thiosulfate disproportionation III (rhodanese)
PPUBIRD1_4695	PWY-5669	phosphatidylethanolamine biosynthesis I
PPUBIRD1_4709	PWY-6890	4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis
PPUBIRD1_4730	PWY-5737	(5<i>R</i>)-carbapenem carboxylate biosynthesis
PPUBIRD1_4730	PWY-6853	ethylene biosynthesis II (microbes)
PPUBIRD1_4730	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
PPUBIRD1_4744	PWY-1042	glycolysis IV (plant cytosol)
PPUBIRD1_4744	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
PPUBIRD1_4744	PWY-5484	glycolysis II (from fructose 6-phosphate)
PPUBIRD1_4744	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
PPUBIRD1_4744	PWY-7385	1,3-propanediol biosynthesis (engineered)
PPUBIRD1_4747	PWY-1042	glycolysis IV (plant cytosol)
PPUBIRD1_4747	PWY-5484	glycolysis II (from fructose 6-phosphate)
PPUBIRD1_4747	PWY-6886	1-butanol autotrophic biosynthesis
PPUBIRD1_4747	PWY-6901	superpathway of glucose and xylose degradation
PPUBIRD1_4747	PWY-7003	glycerol degradation to butanol
PPUBIRD1_4749	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
PPUBIRD1_4749	PWY-5723	Rubisco shunt
PPUBIRD1_4749	PWY-6891	thiazole biosynthesis II (Bacillus)
PPUBIRD1_4749	PWY-6892	thiazole biosynthesis I (E. coli)
PPUBIRD1_4749	PWY-6901	superpathway of glucose and xylose degradation
PPUBIRD1_4749	PWY-7560	methylerythritol phosphate pathway II
PPUBIRD1_4751	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
PPUBIRD1_4751	PWY-5912	2'-deoxymugineic acid phytosiderophore biosynthesis
PPUBIRD1_4761	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
PPUBIRD1_4762	PWY-2201	folate transformations I
PPUBIRD1_4762	PWY-3841	folate transformations II
PPUBIRD1_4786	PWY-5686	UMP biosynthesis
PPUBIRD1_4787	PWY-5686	UMP biosynthesis
PPUBIRD1_4799	PWY-5839	menaquinol-7 biosynthesis
PPUBIRD1_4799	PWY-5844	menaquinol-9 biosynthesis
PPUBIRD1_4799	PWY-5849	menaquinol-6 biosynthesis
PPUBIRD1_4799	PWY-5890	menaquinol-10 biosynthesis
PPUBIRD1_4799	PWY-5891	menaquinol-11 biosynthesis
PPUBIRD1_4799	PWY-5892	menaquinol-12 biosynthesis
PPUBIRD1_4799	PWY-5895	menaquinol-13 biosynthesis
PPUBIRD1_4818	PWY-5028	L-histidine degradation II
PPUBIRD1_4818	PWY-5030	L-histidine degradation III
PPUBIRD1_4820	PWY-5028	L-histidine degradation II
PPUBIRD1_4820	PWY-5030	L-histidine degradation III
PPUBIRD1_4821	PWY-5028	L-histidine degradation II
PPUBIRD1_4821	PWY-5030	L-histidine degradation III
PPUBIRD1_4829	PWY-5484	glycolysis II (from fructose 6-phosphate)
PPUBIRD1_4830	PWY-5941	glycogen degradation II (eukaryotic)
PPUBIRD1_4830	PWY-622	starch biosynthesis
PPUBIRD1_4830	PWY-6731	starch degradation III
PPUBIRD1_4830	PWY-6737	starch degradation V
PPUBIRD1_4830	PWY-7238	sucrose biosynthesis II
PPUBIRD1_4835	PWY-381	nitrate reduction II (assimilatory)
PPUBIRD1_4835	PWY-5675	nitrate reduction V (assimilatory)
PPUBIRD1_4835	PWY-6549	L-glutamine biosynthesis III
PPUBIRD1_4835	PWY-6963	ammonia assimilation cycle I
PPUBIRD1_4835	PWY-6964	ammonia assimilation cycle II
PPUBIRD1_4836	PWY-3461	L-tyrosine biosynthesis II
PPUBIRD1_4836	PWY-3462	L-phenylalanine biosynthesis II
PPUBIRD1_4836	PWY-6120	L-tyrosine biosynthesis III
PPUBIRD1_4836	PWY-6627	salinosporamide A biosynthesis
PPUBIRD1_4844	PWY-1042	glycolysis IV (plant cytosol)
PPUBIRD1_4844	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
PPUBIRD1_4844	PWY-5484	glycolysis II (from fructose 6-phosphate)
PPUBIRD1_4844	PWY-5723	Rubisco shunt
PPUBIRD1_4844	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
PPUBIRD1_4844	PWY-6886	1-butanol autotrophic biosynthesis
PPUBIRD1_4844	PWY-6901	superpathway of glucose and xylose degradation
PPUBIRD1_4844	PWY-7003	glycerol degradation to butanol
PPUBIRD1_4844	PWY-7124	ethylene biosynthesis V (engineered)
PPUBIRD1_4844	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
PPUBIRD1_4852	PWY-3722	glycine betaine biosynthesis II (Gram-positive bacteria)
PPUBIRD1_4852	PWY-7494	choline degradation IV
PPUBIRD1_4853	PWY-3722	glycine betaine biosynthesis II (Gram-positive bacteria)
PPUBIRD1_4853	PWY-7494	choline degradation IV
PPUBIRD1_4863	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
PPUBIRD1_4863	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
PPUBIRD1_4867	PWY-6164	3-dehydroquinate biosynthesis I
PPUBIRD1_4868	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
PPUBIRD1_4883	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
PPUBIRD1_4884	PWY-3341	L-proline biosynthesis III
PPUBIRD1_4884	PWY-4981	L-proline biosynthesis II (from arginine)
PPUBIRD1_4884	PWY-6344	L-ornithine degradation II (Stickland reaction)
PPUBIRD1_4886	PWY-5344	L-homocysteine biosynthesis
PPUBIRD1_4889	PWY-7206	pyrimidine deoxyribonucleotides dephosphorylation
PPUBIRD1_4893	PWY-6891	thiazole biosynthesis II (Bacillus)
PPUBIRD1_4893	PWY-6892	thiazole biosynthesis I (E. coli)
PPUBIRD1_4918	PWY-5101	L-isoleucine biosynthesis II
PPUBIRD1_4918	PWY-5103	L-isoleucine biosynthesis III
PPUBIRD1_4918	PWY-5104	L-isoleucine biosynthesis IV
PPUBIRD1_4918	PWY-7111	pyruvate fermentation to isobutanol (engineered)
PPUBIRD1_4922	PWY-3841	folate transformations II
PPUBIRD1_4922	PWY-6614	tetrahydrofolate biosynthesis
PPUBIRD1_4932	PWY-3841	folate transformations II
PPUBIRD1_4932	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
PPUBIRD1_4932	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
PPUBIRD1_4932	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
PPUBIRD1_4932	PWY-7199	pyrimidine deoxyribonucleosides salvage
PPUBIRD1_4932	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
PPUBIRD1_4941	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
PPUBIRD1_4941	PWY-5723	Rubisco shunt
PPUBIRD1_4945	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
PPUBIRD1_4945	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
PPUBIRD1_4978	PWY-381	nitrate reduction II (assimilatory)
PPUBIRD1_4978	PWY-5675	nitrate reduction V (assimilatory)
PPUBIRD1_4978	PWY-6549	L-glutamine biosynthesis III
PPUBIRD1_4978	PWY-6963	ammonia assimilation cycle I
PPUBIRD1_4978	PWY-6964	ammonia assimilation cycle II
PPUBIRD1_4979	PWY-381	nitrate reduction II (assimilatory)
PPUBIRD1_4979	PWY-5675	nitrate reduction V (assimilatory)
PPUBIRD1_4979	PWY-6549	L-glutamine biosynthesis III
PPUBIRD1_4979	PWY-6963	ammonia assimilation cycle I
PPUBIRD1_4979	PWY-6964	ammonia assimilation cycle II
PPUBIRD1_4980	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
PPUBIRD1_4981	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
PPUBIRD1_5010	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
PPUBIRD1_5022	PWY-2941	L-lysine biosynthesis II
PPUBIRD1_5022	PWY-2942	L-lysine biosynthesis III
PPUBIRD1_5022	PWY-5097	L-lysine biosynthesis VI
PPUBIRD1_5023	PWY-2941	L-lysine biosynthesis II
PPUBIRD1_5023	PWY-5097	L-lysine biosynthesis VI
PPUBIRD1_5063	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
PPUBIRD1_5073	PWY-5692	allantoin degradation to glyoxylate II
PPUBIRD1_5073	PWY-5698	allantoin degradation to ureidoglycolate II (ammonia producing)
PPUBIRD1_5080	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
PPUBIRD1_5080	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
PPUBIRD1_5080	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
PPUBIRD1_5080	PWY-7206	pyrimidine deoxyribonucleotides dephosphorylation
PPUBIRD1_5082	PWY-6749	CMP-legionaminate biosynthesis I
PPUBIRD1_5083	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
PPUBIRD1_5083	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
PPUBIRD1_5084	PWY-5686	UMP biosynthesis
PPUBIRD1_5089	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
PPUBIRD1_5092	PWY-381	nitrate reduction II (assimilatory)
PPUBIRD1_5092	PWY-5675	nitrate reduction V (assimilatory)
PPUBIRD1_5092	PWY-6549	L-glutamine biosynthesis III
PPUBIRD1_5092	PWY-6963	ammonia assimilation cycle I
PPUBIRD1_5092	PWY-6964	ammonia assimilation cycle II
PPUBIRD1_5109	PWY-5755	4-hydroxybenzoate biosynthesis II (microbes)
PPUBIRD1_5109	PWY-5870	ubiquinol-8 biosynthesis (eukaryotic)
PPUBIRD1_5109	PWY-6148	tetrahydromethanopterin biosynthesis
PPUBIRD1_5124	PWY-2723	trehalose degradation V
PPUBIRD1_5124	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
PPUBIRD1_5124	PWY-5661	GDP-glucose biosynthesis
PPUBIRD1_5124	PWY-5940	streptomycin biosynthesis
PPUBIRD1_5124	PWY-621	sucrose degradation III (sucrose invertase)
PPUBIRD1_5124	PWY-622	starch biosynthesis
PPUBIRD1_5124	PWY-6731	starch degradation III
PPUBIRD1_5124	PWY-6737	starch degradation V
PPUBIRD1_5124	PWY-6981	chitin biosynthesis
PPUBIRD1_5124	PWY-7238	sucrose biosynthesis II
PPUBIRD1_5124	PWY-7343	UDP-glucose biosynthesis
